PeakID (cmd=annotatePeaks.pl homer/diffpeak/diffpeaks_353_vs_349.txt hg38 -raw) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type chr17-1 chr17 22521282 22521514 + 1833.7 0.000 Intergenic Intergenic -1713 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr1-1 chr1 633914 634146 + 830.2 0.000 Intergenic Intergenic -1345 NR_162149 113219467 NR_162149 MIR12136 - microRNA 12136 ncRNA KI270438.1-2 KI270438.1 103990 104222 + 370.1 0.000 NA NA NA NA chr16-1 chr16 46390550 46390782 + 350.9 0.000 Intergenic Intergenic 178431 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo KI270438.1-1 KI270438.1 109491 109723 + 345.5 0.000 NA NA NA NA ML143380.1-1 ML143380.1 79342 79574 + 312.4 0.000 NA NA NA NA chr16-2 chr16 34588105 34588337 + 238.0 0.000 Intergenic Intergenic -206741 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo KI270467.1-1 KI270467.1 2235 2467 + 235.6 0.000 NA NA NA NA chr1-3 chr1 629836 630068 + 210.6 0.000 promoter-TSS (NR_125957) promoter-TSS (NR_125957) -943 NR_125957 101928626 Hs.637667 NR_125957 ENSG00000230021 LOC101928626 - uncharacterized LOC101928626 ncRNA chr5-7 chr5 49667060 49667292 + 178.9 0.000 Intergenic (CATTC)n|Satellite|Satellite 774112 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr12-1 chr12 17282253 17282485 + 174.2 0.000 Intergenic L1PB1|LINE|L1 293622 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr17-2 chr17 26603793 26604025 + 168.4 0.000 Intergenic ALR/Alpha|Satellite|centr 485332 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr16-3 chr16 46394537 46394769 + 164.6 0.000 Intergenic Intergenic 174444 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo KI270438.1-3 KI270438.1 104585 104817 + 164.1 0.000 NA NA NA NA chr5-2 chr5 138469966 138470198 + 160.9 0.000 TTS (NM_001964) TTS (NM_001964) 4603 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr3-1 chr3 93470485 93470717 + 147.0 0.000 Intergenic SAR|Satellite|Satellite 503480 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr1-2 chr1 125180103 125180335 + 143.8 0.000 Intergenic Intergenic 3661107 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo KI270438.1-4 KI270438.1 112141 112373 + 139.3 0.000 NA NA NA NA KI270466.1-1 KI270466.1 901 1133 + 134.3 0.000 NA NA NA NA chr5-5 chr5 49666131 49666363 + 118.9 0.000 Intergenic (CATTC)n|Satellite|Satellite 775041 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr5-3 chr5 49601944 49602176 + 106.6 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat 839228 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr16-6 chr16 46398800 46399032 + 105.8 0.000 Intergenic Intergenic 170181 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr5-1 chr5 49658575 49658807 + 101.0 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 782597 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr5-9 chr5 75336959 75337191 + 98.1 0.000 promoter-TSS (NM_000859) promoter-TSS (NM_000859) -93 NM_001364187 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding chr4-3 chr4 49657489 49657721 + 95.5 0.000 Intergenic (GAATG)n|Satellite|Satellite 670963 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-1 chr2 32916270 32916502 + 88.8 0.000 intron (NR_027099, intron 10 of 10) (G)n|Simple_repeat|Simple_repeat -10741 NR_027097 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA chr21-1 chr21 8219894 8220126 + 85.2 0.000 TTS (NR_146144) TTS (NR_146144) 6122 NR_003287 100008589 NR_003287 RNA28SN5 RN28S1|RNA28S5 RNA, 28S ribosomal N5 rRNA KN196487.1-1 KN196487.1 2083 2315 + 75.1 0.000 NA NA NA NA chr5-13 chr5 49599870 49600102 + 71.1 0.000 Intergenic BSR/Beta|Satellite|Satellite 841302 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr10-1 chr10 41859825 41860057 + 66.6 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 508104 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr16-10 chr16 34581327 34581559 + 63.2 0.000 Intergenic Intergenic -199963 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chrX-1 chrX 125577560 125577792 + 59.8 0.000 Intergenic L1MA3|LINE|L1 257805 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding KI270729.1-1 KI270729.1 3448 3680 + 59.4 0.000 NA NA NA NA chr14-7 chr14 45134382 45134614 + 58.1 0.000 promoter-TSS (NM_002013) promoter-TSS (NM_002013) -17 NM_002013 2287 Hs.509226 NM_002013 ENSG00000100442 FKBP3 FKBP-25|FKBP-3|FKBP25|PPIase FKBP prolyl isomerase 3 protein-coding chr7-24 chr7 104983991 104984223 + 58.1 0.000 non-coding (NR_039981, exon 1 of 1) non-coding (NR_039981, exon 1 of 1) 7058 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA GL000224.1-1 GL000224.1 3784 4016 + 57.5 0.000 NA NA NA NA chr6-2 chr6 151390319 151390551 + 57.3 0.000 intron (NM_020861, intron 1 of 2) CpG 1124 NM_020861 57621 Hs.520073 NM_020861 ENSG00000181472 ZBTB2 ZNF437 zinc finger and BTB domain containing 2 protein-coding chr14-16 chr14 63641657 63641889 + 55.3 0.000 promoter-TSS (NM_001008726) promoter-TSS (NM_001008726) 98 NM_080666 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr16-38 chr16 46401324 46401556 + 53.9 0.000 Intergenic Intergenic 167657 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo GL000008.2-1 GL000008.2 2009 2241 + 52.9 0.000 NA NA NA NA chr19-66 chr19 4247057 4247289 + 52.7 0.000 promoter-TSS (NM_018074) promoter-TSS (NM_018074) 93 NM_018074 55702 Hs.21811 NM_018074 ENSG00000105248 YJU2 CCDC94 YJU2 splicing factor homolog protein-coding chr18-19 chr18 56009560 56009792 + 51.5 0.000 intron (NR_148972, intron 8 of 8) intron (NR_148972, intron 8 of 8) -32602 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr22-9 chr22 37675081 37675313 + 51.1 0.000 promoter-TSS (NM_002305) promoter-TSS (NM_002305) -439 NM_002305 3956 Hs.445351 NM_002305 ENSG00000100097 LGALS1 GAL1|GBP galectin 1 protein-coding chrX-7 chrX 154378977 154379209 + 51.1 0.000 promoter-TSS (NM_000117) promoter-TSS (NM_000117) -144 NM_000117 2010 Hs.522823 NM_000117 ENSG00000102119 EMD EDMD|LEMD5|STA emerin protein-coding chr4-31 chr4 76090397 76090629 + 49.7 0.000 intron (NM_001130017, intron 3 of 9) intron (NM_001130017, intron 3 of 9) 15818 NM_001130016 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr17-67 chr17 81507931 81508163 + 49.7 0.000 Intergenic AluJr|SINE|Alu 4752 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr22-2 chr22 43015146 43015378 + 49.3 0.000 promoter-TSS (NM_001349971) promoter-TSS (NM_001349971) -86 NM_001349974 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr15-13 chr15 64387554 64387786 + 48.9 0.000 promoter-TSS (NM_016213) promoter-TSS (NM_016213) 17 NR_109934 9768 Hs.81892 NM_014736 ENSG00000166803 PCLAF KIAA0101|L5|NS5ATP9|OEATC|OEATC-1|OEATC1|PAF|PAF15|p15(PAF)|p15/PAF|p15PAF PCNA clamp associated factor protein-coding chrX-2 chrX 69672458 69672690 + 48.7 0.000 intron (NM_001005613, intron 2 of 2) 5S|rRNA|rRNA 56461 NM_001005609 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr7-23 chr7 101121996 101122228 + 48.1 0.000 Intergenic Intergenic -4977 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr10-25 chr10 102280581 102280813 + 47.7 0.000 intron (NM_001199378, intron 3 of 39) intron (NM_001199378, intron 3 of 39) 35165 NM_001199378 8729 Hs.290243 NM_004193 ENSG00000107862 GBF1 ARF1GEF golgi brefeldin A resistant guanine nucleotide exchange factor 1 protein-coding chr10-6 chr10 133689326 133689558 + 47.7 0.000 Intergenic BSR/Beta|Satellite|Satellite -62647 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr14-10 chr14 75282765 75282997 + 47.7 0.000 TTS (NM_005252) TTS (NM_005252) 4053 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr5-57 chr5 13957129 13957361 + 47.7 0.000 Intergenic Intergenic -12765 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr7-61 chr7 130489076 130489308 + 46.6 0.000 non-coding (NR_004382, exon 2 of 2) non-coding (NR_004382, exon 2 of 2) 1980 NR_004382 317751 Hs.627349 NR_004382 MESTIT1 MEST-AS1|MEST-IT|MEST-IT1|NCRNA00040|PEG1-AS MEST intronic transcript 1, antisense RNA ncRNA chr4-10 chr4 49644551 49644783 + 46.4 0.000 Intergenic (GAATG)n|Satellite|Satellite 658025 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr8-12 chr8 100789022 100789254 + 46.2 0.000 Intergenic L2c|LINE|L2 -67050 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr3-43 chr3 134358073 134358305 + 46.2 0.000 intron (NM_001278683, intron 9 of 9) intron (NM_001278683, intron 9 of 9) 9673 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr5-8 chr5 49602655 49602887 + 45.8 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat 838517 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr16-16 chr16 34582962 34583194 + 45.4 0.000 Intergenic Intergenic -201598 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr17-96 chr17 21977578 21977810 + 44.8 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -225301 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr8-17 chr8 23452764 23452996 + 44.4 0.000 intron (NM_004901, intron 1 of 12) intron (NM_004901, intron 1 of 12) 4767 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr8-9 chr8 119873611 119873843 + 44.2 0.000 promoter-TSS (NM_001283012) promoter-TSS (NM_001283012) 5 NM_022783 64798 Hs.112981 NM_022783 ENSG00000155792 DEPTOR DEP.6|DEPDC6 DEP domain containing MTOR interacting protein protein-coding chr16-56 chr16 58629894 58630126 + 44.2 0.000 promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -184 NM_001265612 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr16-80 chr16 34573127 34573359 + 44.2 0.000 Intergenic (GAATG)n|Satellite|Satellite -191763 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr1-11 chr1 40979678 40979910 + 44.0 0.000 promoter-TSS (NM_001905) promoter-TSS (NM_001905) 98 NM_001905 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chr5-56 chr5 6713037 6713269 + 43.6 0.000 promoter-TSS (NM_006999) promoter-TSS (NM_006999) -279 NM_006999 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding KI270744.1-2 KI270744.1 108105 108337 + 43.6 0.000 NA NA NA NA chr4-27 chr4 82900568 82900800 + 43.2 0.000 promoter-TSS (NM_024672) promoter-TSS (NM_024672) 34 NM_001317776 79725 Hs.582050 NM_024672 ENSG00000168152 THAP9 hTh9 THAP domain containing 9 protein-coding chr16-11 chr16 34593146 34593378 + 43.0 0.000 Intergenic Intergenic -211782 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr10-41 chr10 17238727 17238959 + 42.8 0.000 Intergenic Intergenic -8858 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr9-11 chr9 93098741 93098973 + 42.6 0.000 intron (NR_134468, intron 1 of 4) intron (NR_134468, intron 1 of 4) 2640 NM_001318010 84270 Hs.434213 NM_032310 ENSG00000165233 CARD19 BinCARD|C9orf89 caspase recruitment domain family member 19 protein-coding chr9-14 chr9 4984716 4984948 + 42.6 0.000 promoter-TSS (NM_001322196) promoter-TSS (NM_001322196) -254 NM_001322194 3717 Hs.656213 NM_004972 ENSG00000096968 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding chr11-86 chr11 120546650 120546882 + 42.4 0.000 intron (NM_014619, intron 1 of 20) intron (NM_014619, intron 1 of 20) -17670 NM_001282470 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr14-64 chr14 85731247 85731479 + 42.2 0.000 Intergenic Intergenic 198014 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr11-88 chr11 8671314 8671546 + 42.0 0.000 Intergenic Intergenic -11362 NM_000990 6157 Hs.523463 NM_000990 ENSG00000166441 RPL27A L27A ribosomal protein L27a protein-coding chr8-40 chr8 125569424 125569656 + 41.4 0.000 Intergenic L2b|LINE|L2 137331 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr12-54 chr12 71664075 71664307 + 41.0 0.000 promoter-TSS (NM_031435) promoter-TSS (NM_031435) -110 NM_031435 83591 Hs.245798 NM_031435 ENSG00000173451 THAP2 - THAP domain containing 2 protein-coding chr7-66 chr7 87152464 87152696 + 41.0 0.000 promoter-TSS (NM_021145) promoter-TSS (NM_021145) 26 NM_021145 9988 Hs.196129 NM_021145 ENSG00000135164 DMTF1 DMP1|DMTF|MRUL|hDMP1 cyclin D binding myb like transcription factor 1 protein-coding chr3-194 chr3 159854706 159854938 + 41.0 0.000 intron (NM_001197109, intron 1 of 6) intron (NM_001197109, intron 1 of 6) 14961 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr1-88 chr1 204516160 204516392 + 40.8 0.000 promoter-TSS (NM_001278519) promoter-TSS (NM_001278519) -103 NM_001204172 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chr1-74 chr1 35193144 35193376 + 40.0 0.000 promoter-TSS (NR_136702) promoter-TSS (NR_136702) -115 NR_136702 6421 Hs.355934 NM_005066 ENSG00000116560 SFPQ POMP100|PPP1R140|PSF splicing factor proline and glutamine rich protein-coding chr11-126 chr11 8604441 8604673 + 40.0 0.000 Intergenic L2a|LINE|L2 -10329 NM_001289058 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr11-195 chr11 77346923 77347155 + 39.8 0.000 intron (NM_001128620, intron 9 of 15) intron (NM_001128620, intron 9 of 15) -45373 NM_182833 220032 Hs.249795 NM_182833 ENSG00000178795 GDPD4 GDE6 glycerophosphodiester phosphodiesterase domain containing 4 protein-coding KI270729.1-3 KI270729.1 2240 2472 + 39.8 0.000 NA NA NA NA chr17-40 chr17 21980479 21980711 + 39.4 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -222400 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr11-236 chr11 120331729 120331961 + 39.4 0.000 3' UTR (NM_001198670, exon 3 of 3) 3' UTR (NM_001198670, exon 3 of 3) -4568 NM_015313 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chr1-255 chr1 1841771 1842003 + 39.2 0.000 intron (NM_001282538, intron 1 of 9) L1MB5|LINE|L1 49200 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr8-27 chr8 23019369 23019601 + 39.2 0.000 TTS (NM_003842) TTS (NM_003842) 19906 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr14-29 chr14 44961959 44962191 + 39.2 0.000 promoter-TSS (NM_001308112) promoter-TSS (NM_001308112) -115 NM_015091 23116 Hs.371078 NM_015091 ENSG00000198718 TOGARAM1 FAM179B|KIAA0423 TOG array regulator of axonemal microtubules 1 protein-coding chr8-2 chr8 65260449 65260681 + 39.0 0.000 Intergenic L1MA1|LINE|L1 -80225 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr2-57 chr2 159399854 159400086 + 39.0 0.000 intron (NM_001329858, intron 16 of 36) Tigger15a|DNA|TcMar-Tigger -113267 NM_001128212 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr22-49 chr22 36370447 36370679 + 39.0 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 17504 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr10-53 chr10 38094212 38094444 + 38.8 0.000 promoter-TSS (NM_001324259) promoter-TSS (NM_001324259) -8 NM_001324253 7587 Hs.292575 NM_003421 ENSG00000075407 ZNF37A KOX21|ZNF37 zinc finger protein 37A protein-coding chr6-25 chr6 52995556 52995788 + 38.6 0.000 promoter-TSS (NM_001512) promoter-TSS (NM_001512) 52 NR_001445 125050 NR_001445 ENSG00000202198 RN7SK 7SK RNA component of 7SK nuclear ribonucleoprotein snRNA chr17-87 chr17 23016213 23016445 + 38.4 0.000 Intergenic ALR/Alpha|Satellite|centr 493218 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr5-41 chr5 5422239 5422471 + 38.2 0.000 promoter-TSS (NM_015325) promoter-TSS (NM_015325) -322 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr14-58 chr14 73058299 73058531 + 38.2 0.000 promoter-TSS (NM_021239) promoter-TSS (NM_021239) -119 NM_021239 58517 Hs.531106 NM_021239 ENSG00000119707 RBM25 NET52|RED120|RNPC7|S164|Snu71|fSAP94 RNA binding motif protein 25 protein-coding chr20-20 chr20 35339187 35339419 + 38.2 0.000 intron (NM_001184977, intron 5 of 7) intron (NM_001184977, intron 5 of 7) -46878 NM_178468 128876 Hs.592149 NM_178468 ENSG00000125998 FAM83C C20orf128|dJ614O4.7 family with sequence similarity 83 member C protein-coding chr6-42 chr6 36917691 36917923 + 38.0 0.000 intron (NM_152734, intron 6 of 7) intron (NM_152734, intron 6 of 7) -30456 NM_001199159 221476 Hs.25391 NM_153370 ENSG00000164530 PI16 CD364|CRISP9|MSMBBP|PSPBP peptidase inhibitor 16 protein-coding chr10-105 chr10 15097117 15097349 + 38.0 0.000 promoter-TSS (NM_001265601) promoter-TSS (NM_001265601) 53 NM_001265601 10557 Hs.94986 NM_006414 ENSG00000152464 RPP38 - ribonuclease P/MRP subunit p38 protein-coding chr8-107 chr8 47941929 47942161 + 37.8 0.000 intron (NM_001081640, intron 10 of 84) intron (NM_001081640, intron 10 of 84) 18091 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr3-131 chr3 43562673 43562905 + 37.8 0.000 intron (NM_001346463, intron 8 of 12) L1MA4A|LINE|L1 59137 NM_001346466 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr19-257 chr19 31127551 31127783 + 37.8 0.000 Intergenic Intergenic -39843 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr4-19 chr4 84666581 84666813 + 37.6 0.000 Intergenic L1MA3|LINE|L1 83570 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr4-58 chr4 145734669 145734901 + 37.6 0.000 Intergenic Intergenic 54581 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr1-414 chr1 67390031 67390263 + 37.6 0.000 intron (NM_001258215, intron 13 of 13) intron (NM_001258215, intron 13 of 13) 40255 NM_001018069 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr5-98 chr5 129963453 129963685 + 37.4 0.000 intron (NM_175856, intron 2 of 2) intron (NM_175856, intron 2 of 2) 59104 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr12-173 chr12 11989195 11989427 + 37.4 0.000 Intergenic L1MA5A|LINE|L1 -60550 NM_001370268 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding chr7-30 chr7 87876119 87876351 + 37.4 0.000 promoter-TSS (NM_006716) promoter-TSS (NM_006716) 125 NM_018843 55972 Hs.208414 NM_018843 ENSG00000075303 SLC25A40 MCFP solute carrier family 25 member 40 protein-coding GL000225.1-2 GL000225.1 81046 81278 + 37.4 0.000 NA NA NA NA chr6-12 chr6 158040488 158040720 + 37.2 0.000 intron (NM_003898, intron 4 of 26) intron (NM_003898, intron 4 of 26) 23511 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr17-82 chr17 50209657 50209889 + 37.2 0.000 Intergenic Intergenic -4921 NR_110806 101927230 Hs.514326 NR_110806 LINC01969 - long intergenic non-protein coding RNA 1969 ncRNA chr5-68 chr5 37005455 37005687 + 37.2 0.000 intron (NM_015384, intron 16 of 45) intron (NM_015384, intron 16 of 45) 128802 NM_133433 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr5-96 chr5 37722905 37723137 + 37.1 0.000 intron (NM_001345998, intron 15 of 17) intron (NM_001345998, intron 15 of 17) 111801 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr10-60 chr10 51937765 51937997 + 37.1 0.000 intron (NM_001098512, intron 5 of 17) MER44D|DNA|TcMar-Tigger -238286 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr1-72 chr1 246067693 246067925 + 37.1 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 349603 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr1-231 chr1 229758631 229758863 + 37.1 0.000 Intergenic MLT1J-int|LTR|ERVL-MaLR 127071 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr2-73 chr2 207513841 207514073 + 37.1 0.000 Intergenic Intergenic -16005 NM_001320793 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding chr15-96 chr15 50227140 50227372 + 37.1 0.000 intron (NM_001159629, intron 6 of 8) intron (NM_001159629, intron 6 of 8) 38470 NM_002112 3067 Hs.1481 NM_002112 ENSG00000140287 HDC - histidine decarboxylase protein-coding chr15-38 chr15 81092316 81092548 + 36.9 0.000 Intergenic Intergenic -41838 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr8-240 chr8 140425694 140425926 + 36.9 0.000 intron (NM_001321646, intron 4 of 21) intron (NM_001321646, intron 4 of 21) 31934 NM_001160372 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding KI270729.1-5 KI270729.1 5703 5935 + 36.7 0.000 NA NA NA NA chr16-97 chr16 34573887 34574119 + 36.7 0.000 Intergenic (GAATG)n|Satellite|Satellite -192523 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr20-15 chr20 3408706 3408938 + 36.7 0.000 Intergenic Intergenic -1160 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr10-244 chr10 32418042 32418274 + 36.7 0.000 Intergenic Intergenic 27898 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA chr7-158 chr7 69395173 69395405 + 36.5 0.000 Intergenic Intergenic 202335 NR_108105 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr13-11 chr13 48037719 48037951 + 36.5 0.000 exon (NM_018283, exon 1 of 3) exon (NM_018283, exon 1 of 3) 109 NM_018283 55270 Hs.144407 NM_018283 ENSG00000136159 NUDT15 MTH2|NUDT15D nudix hydrolase 15 protein-coding chr10-2 chr10 41877777 41878009 + 36.3 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 490152 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr13-20 chr13 97880000 97880232 + 36.3 0.000 Intergenic Intergenic -73559 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr1-93 chr1 85584498 85584730 + 36.3 0.000 TTS (NM_001554) TTS (NM_001554) 3853 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr11-171 chr11 47434494 47434726 + 36.3 0.000 Intergenic L1MC4|LINE|L1 -8137 NM_002804 5702 Hs.250758 NM_002804 ENSG00000165916 PSMC3 TBP1 proteasome 26S subunit, ATPase 3 protein-coding chr13-9 chr13 19633471 19633703 + 36.1 0.000 promoter-TSS (NM_017520) promoter-TSS (NM_017520) -72 NM_017520 54737 Hs.269654 NM_017520 ENSG00000196199 MPHOSPH8 HSMPP8|TWA3|mpp8 M-phase phosphoprotein 8 protein-coding chr12-62 chr12 55847907 55848139 + 36.1 0.000 Intergenic Intergenic -5087 NM_002429 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chr2-104 chr2 36478288 36478520 + 36.1 0.000 intron (NM_016441, intron 6 of 16) intron (NM_016441, intron 6 of 16) 119764 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr3-225 chr3 117399477 117399709 + 35.9 0.000 Intergenic Intergenic 291332 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr10-180 chr10 32940304 32940536 + 35.9 0.000 intron (NM_002211, intron 1 of 15) Tigger3b|DNA|TcMar-Tigger -4862 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr6-32 chr6 38346678 38346910 + 35.9 0.000 intron (NM_052893, intron 7 of 11) AmnSINE1|SINE|5S-Deu-L2 -134802 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr4-30 chr4 47485301 47485533 + 35.7 0.000 5' UTR (NM_020453, exon 1 of 23) 5' UTR (NM_020453, exon 1 of 23) 142 NM_020453 57205 Hs.437241 NM_020453 ENSG00000145246 ATP10D ATPVD ATPase phospholipid transporting 10D (putative) protein-coding chr11-217 chr11 35630080 35630312 + 35.7 0.000 Intergenic Intergenic 11736 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr22-54 chr22 36355143 36355375 + 35.5 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 32808 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr5-129 chr5 158382701 158382933 + 35.5 0.000 intron (NR_109888, intron 1 of 6) MLT1H|LTR|ERVL-MaLR 26956 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr13-21 chr13 99356414 99356646 + 35.5 0.000 TTS (NR_030353) TTS (NR_030353) 399 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr10-76 chr10 59908556 59908788 + 35.1 0.000 Intergenic Intergenic -2116 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr17-29 chr17 19648507 19648739 + 35.1 0.000 promoter-TSS (NM_001031806) promoter-TSS (NM_001031806) -128 NM_001031806 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding chr18-12 chr18 48930072 48930304 + 34.9 0.000 intron (NM_001190822, intron 3 of 3) intron (NM_001190822, intron 3 of 3) 12619 NM_001190823 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr18-37 chr18 8890997 8891229 + 34.7 0.000 Intergenic MER77B|LTR|ERVL 173732 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr16-43 chr16 23149424 23149656 + 34.7 0.000 promoter-TSS (NM_020718) promoter-TSS (NM_020718) -270 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr1-126 chr1 91885990 91886222 + 34.5 0.000 promoter-TSS (NM_003243) promoter-TSS (NM_003243) 45 NM_001195683 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr12-309 chr12 81668547 81668779 + 34.5 0.000 intron (NM_001220474, intron 2 of 30) intron (NM_001220474, intron 2 of 30) -70292 NM_001220477 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding chr11-232 chr11 93783962 93784194 + 34.5 0.000 promoter-TSS (NM_004268) promoter-TSS (NM_004268) -204 NM_004268 9440 Hs.444931 NM_004268 ENSG00000042429 MED17 CRSP6|CRSP77|DRIP80|SRB4|TRAP80 mediator complex subunit 17 protein-coding chr8-125 chr8 135466594 135466826 + 34.5 0.000 intron (NM_006558, intron 1 of 8) intron (NM_006558, intron 1 of 8) 9254 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr6-68 chr6 122789154 122789386 + 34.5 0.000 promoter-TSS (NM_006714) promoter-TSS (NM_006714) 12 NM_006714 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr15-34 chr15 64093813 64094045 + 34.3 0.000 promoter-TSS (NR_110310) promoter-TSS (NR_110310) 79 NM_001289108 84191 Hs.439548 NM_032231 ENSG00000166797 CIAO2A CIA2A|FAM96A cytosolic iron-sulfur assembly component 2A protein-coding chr15-175 chr15 62444491 62444723 + 34.3 0.000 Intergenic Intergenic 101578 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr4-69 chr4 60683426 60683658 + 34.3 0.000 Intergenic Intergenic -239077 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr4-125 chr4 48330058 48330290 + 34.1 0.000 Intergenic Intergenic -11355 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr19-102 chr19 50004073 50004305 + 34.1 0.000 intron (NM_016440, intron 5 of 14) intron (NM_016440, intron 5 of 14) 21183 NM_001308420 51231 Hs.443330 NM_016440 ENSG00000105053 VRK3 - VRK serine/threonine kinase 3 protein-coding chr17-20 chr17 51785054 51785286 + 33.9 0.000 intron (NM_001082533, intron 4 of 9) L1MA2|LINE|L1 349743 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr2-217 chr2 24015557 24015789 + 33.9 0.000 intron (NM_001346880, intron 2 of 13) HAL1b|LINE|L1 5588 NM_001346880 388931 Hs.407482 NM_001080473 ENSG00000205639 MFSD2B - major facilitator superfamily domain containing 2B protein-coding chr6-69 chr6 134909168 134909400 + 33.9 0.000 Intergenic Intergenic 40817 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr17-207 chr17 69654982 69655214 + 33.9 0.000 intron (NR_109972, intron 3 of 4) intron (NR_109972, intron 3 of 4) 61111 NR_109972 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA chr2-243 chr2 209496033 209496265 + 33.7 0.000 intron (NM_001039538, intron 1 of 14) intron (NM_001039538, intron 1 of 14) 72102 NM_001039538 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr10-7 chr10 41875327 41875559 + 33.7 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 492602 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr5-180 chr5 55278835 55279067 + 33.7 0.000 intron (NR_144323, intron 12 of 26) L2|LINE|L2 28743 NM_001345964 54505 Hs.593268 NM_019030 ENSG00000067248 DHX29 DDX29 DExH-box helicase 29 protein-coding chr1-209 chr1 26110896 26111128 + 33.5 0.000 promoter-TSS (NM_001243532) promoter-TSS (NM_001243532) -153 NM_001243532 149420 Hs.468801 NM_152835 ENSG00000175087 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding chr11-198 chr11 120400830 120401062 + 33.5 0.000 intron (NM_001301084, intron 1 of 40) intron (NM_001301084, intron 1 of 40) 15619 NM_001301084 23365 Hs.24598 NM_015313 ENSG00000196914 ARHGEF12 LARG|PRO2792 Rho guanine nucleotide exchange factor 12 protein-coding chrX-16 chrX 100636605 100636837 + 33.3 0.000 promoter-TSS (NM_003270) promoter-TSS (NM_003270) 85 NM_001278740 7105 Hs.43233 NM_003270 ENSG00000000003 TSPAN6 T245|TM4SF6|TSPAN-6 tetraspanin 6 protein-coding chr1-131 chr1 246507049 246507281 + 33.3 0.000 exon (NM_001167740, exon 1 of 12) exon (NM_001167740, exon 1 of 12) 114 NM_001167740 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr5-119 chr5 33440683 33440915 + 33.3 0.000 promoter-TSS (NR_047678) promoter-TSS (NR_047678) 23 NR_047676 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr16-123 chr16 20906523 20906755 + 33.1 0.000 intron (NR_161432, intron 2 of 3) intron (NR_161432, intron 2 of 3) 5377 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr7-128 chr7 127938668 127938900 + 33.1 0.000 intron (NM_014390, intron 15 of 23) intron (NM_014390, intron 15 of 23) -58725 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr18-10 chr18 59359251 59359483 + 33.1 0.000 promoter-TSS (NM_005570) promoter-TSS (NM_005570) -102 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr10-20 chr10 59906447 59906679 + 33.1 0.000 promoter-TSS (NM_005436) promoter-TSS (NM_005436) -7 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr5-178 chr5 177546491 177546723 + 33.1 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 7488 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr1-498 chr1 151988477 151988709 + 32.9 0.000 intron (NM_002966, intron 1 of 2) intron (NM_002966, intron 1 of 2) 5266 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr2-277 chr2 179592166 179592398 + 32.9 0.000 intron (NR_148056, intron 3 of 9) intron (NR_148056, intron 3 of 9) -6376 NM_001282725 151126 Hs.655005 NM_152520 ENSG00000144331 ZNF385B ZNF533 zinc finger protein 385B protein-coding chr1-123 chr1 27012869 27013101 + 32.9 0.000 promoter-TSS (NM_052943) promoter-TSS (NM_052943) -135 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr2-364 chr2 227818283 227818515 + 32.9 0.000 TTS (NM_001130046) TTS (NM_001130046) 4557 NM_004591 6364 Hs.75498 NM_004591 ENSG00000115009 CCL20 CKb4|Exodus|LARC|MIP-3-alpha|MIP-3a|MIP3A|SCYA20|ST38 C-C motif chemokine ligand 20 protein-coding chr1-160 chr1 7117926 7118158 + 32.7 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 271712 NR_146200 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr5-184 chr5 84113734 84113966 + 32.7 0.000 intron (NM_001278642, intron 4 of 9) intron (NM_001278642, intron 4 of 9) 271017 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr3-226 chr3 123641015 123641247 + 32.7 0.000 intron (NM_001321309, intron 26 of 32) intron (NM_001321309, intron 26 of 32) -20583 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr12-148 chr12 30725844 30726076 + 32.7 0.000 intron (NM_001002259, intron 9 of 17) intron (NM_001002259, intron 9 of 17) 28554 NM_001319843 65981 Hs.234355 NM_023925 ENSG00000110888 CAPRIN2 C1QDC1|EEG-1|EEG1|RNG140 caprin family member 2 protein-coding chr11-323 chr11 111735831 111736063 + 32.7 0.000 intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 30442 NM_181700 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr12-84 chr12 49507135 49507367 + 32.7 0.000 intron (NM_001293285, intron 10 of 14) intron (NM_001293285, intron 10 of 14) -31779 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr2-115 chr2 69789285 69789517 + 32.7 0.000 intron (NM_001320700, intron 3 of 12) intron (NM_001320700, intron 3 of 12) -40259 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr2-155 chr2 208984831 208985063 + 32.7 0.000 Intergenic MIR|SINE|MIR -439100 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr22-179 chr22 50120019 50120251 + 32.7 0.000 intron (NM_018995, intron 9 of 26) intron (NM_018995, intron 9 of 26) -26920 NM_001164106 54456 Hs.62880 NM_018995 ENSG00000073146 MOV10L1 CHAMP|DJ402G11.8 Mov10 like RISC complex RNA helicase 1 protein-coding chr2-40 chr2 149330509 149330741 + 32.7 0.000 promoter-TSS (NM_194317) promoter-TSS (NM_194317) 38 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-167 chr7 70082181 70082413 + 32.7 0.000 intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 483822 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr7-57 chr7 151113702 151113934 + 32.5 0.000 promoter-TSS (NM_001308305) promoter-TSS (NM_001308305) -820 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr17-236 chr17 17613716 17613948 + 32.5 0.000 Intergenic L1MC5|LINE|L1 -22124 NM_148172 10400 Hs.714193 NM_007169 ENSG00000133027 PEMT PEAMT|PEMPT|PEMT2|PLMT|PNMT phosphatidylethanolamine N-methyltransferase protein-coding chr5-94 chr5 35781176 35781408 + 32.5 0.000 intron (NM_024867, intron 30 of 36) intron (NM_024867, intron 30 of 36) -75599 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding chr5-189 chr5 143536396 143536628 + 32.5 0.000 Intergenic Intergenic -101000 NM_001018075 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr1-185 chr1 15760769 15761001 + 32.5 0.000 intron (NM_001024216, intron 1 of 6) intron (NM_001024216, intron 1 of 6) 2090 NM_001024216 54751 Hs.530101 NM_017556 ENSG00000162458 FBLIM1 CAL|FBLP-1|FBLP1 filamin binding LIM protein 1 protein-coding chr5-38 chr5 72816599 72816831 + 32.3 0.000 promoter-TSS (NM_001364295) promoter-TSS (NM_001364295) 54 NM_001364295 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr1-310 chr1 28755792 28756024 + 32.3 0.000 intron (NM_001173128, intron 5 of 5) Tigger4a|DNA|TcMar-Tigger 18968 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr15-29 chr15 90102624 90102856 + 32.3 0.000 promoter-TSS (NM_001290114) promoter-TSS (NM_001290114) -186 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr11-92 chr11 67374128 67374360 + 32.3 0.000 promoter-TSS (NM_013246) promoter-TSS (NM_013246) -67 NM_001166212 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr17-201 chr17 28380179 28380411 + 32.1 0.000 intron (NM_015077, intron 1 of 8) L2a|LINE|L2 8601 NM_015077 23098 Hs.743510 NM_015077 ENSG00000004139 SARM1 MyD88-5|SAMD2|SARM sterile alpha and TIR motif containing 1 protein-coding chr6-70 chr6 136113800 136114032 + 32.1 0.000 intron (NM_018945, intron 3 of 12) intron (NM_018945, intron 3 of 12) -41089 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chr2-190 chr2 162072365 162072597 + 32.1 0.000 intron (NM_001935, intron 2 of 25) intron (NM_001935, intron 2 of 25) 1734 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding chr5-268 chr5 14156588 14156820 + 32.1 0.000 intron (NM_007118, intron 1 of 56) L1MC4|LINE|L1 13362 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr10-109 chr10 73660991 73661223 + 31.9 0.000 Intergenic Intergenic -5078 NM_001114133 79933 Hs.645273 NM_024875 ENSG00000166317 SYNPO2L - synaptopodin 2 like protein-coding chr11-297 chr11 73931360 73931592 + 31.9 0.000 TTS (NM_025155) TTS (NM_025155) -18843 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr4-37 chr4 48602308 48602540 + 31.9 0.000 intron (NM_015030, intron 12 of 63) MIR|SINE|MIR 112172 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding chr7-150 chr7 149233618 149233850 + 31.7 0.000 Intergenic AluSz|SINE|Alu -5917 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr1-112 chr1 37476530 37476762 + 31.7 0.000 intron (NM_001323550, intron 2 of 5) (CCAGCCC)n|Simple_repeat|Simple_repeat 2066 NM_025079 80149 Hs.656294 NM_025079 ENSG00000163874 ZC3H12A MCPIP|MCPIP-1|MCPIP1|Reg1|dJ423B22.1 zinc finger CCCH-type containing 12A protein-coding chr3-178 chr3 81444015 81444247 + 31.7 0.000 Intergenic Intergenic 317514 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr12-165 chr12 121927842 121928074 + 31.7 0.000 intron (NM_001178003, intron 3 of 17) intron (NM_001178003, intron 3 of 17) 9366 NM_144668 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr4-133 chr4 128529132 128529364 + 31.7 0.000 Intergenic Intergenic 101232 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr8-184 chr8 18661089 18661321 + 31.7 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 147662 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr8-78 chr8 22657941 22658173 + 31.7 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) 11064 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr8-168 chr8 100948340 100948572 + 31.7 0.000 intron (NM_001135700, intron 2 of 5) intron (NM_001135700, intron 2 of 5) 2115 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr2-65 chr2 11374645 11374877 + 31.5 0.000 Intergenic Intergenic -19220 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr13-37 chr13 30342078 30342310 + 31.5 0.000 intron (NR_024464, intron 4 of 4) intron (NR_024464, intron 4 of 4) 31720 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr12-473 chr12 121452150 121452382 + 31.3 0.000 intron (NM_001005366, intron 13 of 22) L1MB2|LINE|L1 -7914 NR_106957 102465665 NR_106957 ENSG00000284402 MIR7107 hsa-mir-7107 microRNA 7107 ncRNA chr2-84 chr2 236569730 236569962 + 31.3 0.000 promoter-TSS (NM_020311) promoter-TSS (NM_020311) 21 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr3-229 chr3 168424419 168424651 + 31.3 0.000 intron (NR_021485, intron 3 of 15) intron (NR_021485, intron 3 of 15) -127319 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA KI270729.1-2 KI270729.1 27688 27920 + 31.3 0.000 NA NA NA NA chr8-28 chr8 67343858 67344090 + 31.3 0.000 promoter-TSS (NM_006421) promoter-TSS (NM_006421) 140 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chr15-41 chr15 43185183 43185415 + 31.1 0.000 promoter-TSS (NR_045998) promoter-TSS (NR_045998) -104 NR_045998 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr8-101 chr8 22685603 22685835 + 31.1 0.000 Intergenic Intergenic 6645 NM_001199880 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr6-28 chr6 161273965 161274197 + 31.1 0.000 promoter-TSS (NM_020133) promoter-TSS (NM_020133) -20 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr17-118 chr17 40466804 40467036 + 31.1 0.000 Intergenic L2c|LINE|L2 23470 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr2-337 chr2 101517591 101517823 + 31.1 0.000 Intergenic Intergenic -42595 NM_001367509 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr2-321 chr2 68319560 68319792 + 30.9 0.000 5' UTR (NM_015463, exon 1 of 3) 5' UTR (NM_015463, exon 1 of 3) 375 NM_015463 25927 Hs.212885 NM_015463 ENSG00000119865 CNRIP1 C2orf32|CRIP1 cannabinoid receptor interacting protein 1 protein-coding chr10-355 chr10 124041826 124042058 + 30.9 0.000 intron (NM_014863, intron 4 of 5) intron (NM_014863, intron 4 of 5) 50464 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr11-135 chr11 61962087 61962319 + 30.9 0.000 intron (NR_134580, intron 9 of 10) intron (NR_134580, intron 9 of 10) 5431 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr10-182 chr10 35195955 35196187 + 30.9 0.000 exon (NM_001267570, exon 1 of 4) exon (NM_001267570, exon 1 of 4) 169 NM_182721 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr15-59 chr15 59657376 59657608 + 30.9 0.000 promoter-TSS (NM_001320929) promoter-TSS (NM_001320929) 23 NM_004492 2958 Hs.512934 NM_004492 ENSG00000140307 GTF2A2 HsT18745|T18745|TF2A2|TFIIA|TFIIA-12|TFIIA-gamma|TFIIAS general transcription factor IIA subunit 2 protein-coding chr17-227 chr17 66354192 66354424 + 30.9 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) 51695 NM_002737 5578 Hs.531704 NM_002737 ENSG00000154229 PRKCA AAG6|PKC-alpha|PKCA|PKCI+/-|PKCalpha|PRKACA protein kinase C alpha protein-coding chr3-86 chr3 48694633 48694865 + 30.9 0.000 non-coding (NR_027437, exon 3 of 4) non-coding (NR_027437, exon 3 of 4) -8834 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr22-415 chr22 42620692 42620924 + 30.9 0.000 intron (NM_007326, intron 8 of 8) L4_A_Mam|LINE|RTE-X 5563 NR_029422 267010 Hs.574857 NR_029422 ENSG00000276027 RNU12 RNU12-1|RNU12L|RNU12P|dJ222E13.7 RNA, U12 small nuclear snRNA chr7-395 chr7 131027514 131027746 + 30.9 0.000 intron (NR_109850, intron 3 of 5) intron (NR_109850, intron 3 of 5) 79400 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr6-113 chr6 26043613 26043845 + 30.7 0.000 promoter-TSS (NM_021062) promoter-TSS (NM_021062) -72 NM_021062 3018 Hs.553494 NM_021062 ENSG00000276410 HIST1H2BB H2B.1|H2B/f|H2BFF histone cluster 1 H2B family member b protein-coding chr4-158 chr4 94488838 94489070 + 30.7 0.000 intron (NM_001256428, intron 2 of 11) intron (NM_001256428, intron 2 of 11) 37012 NM_006457 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr5-186 chr5 130992207 130992439 + 30.7 0.000 Intergenic Intergenic 172933 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr14-76 chr14 68598745 68598977 + 30.7 0.000 intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 29926 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr11-366 chr11 102780520 102780752 + 30.7 0.000 promoter-TSS (NM_002425) promoter-TSS (NM_002425) -8 NM_002425 4319 Hs.2258 NM_002425 ENSG00000166670 MMP10 SL-2|STMY2 matrix metallopeptidase 10 protein-coding chr5-248 chr5 127001977 127002209 + 30.7 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 28465 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr17-157 chr17 19346684 19346916 + 30.7 0.000 TTS (NM_001321216) TTS (NM_001321216) -2226 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr3-80 chr3 49940340 49940572 + 30.7 0.000 intron (NM_001349194, intron 1 of 17) CpG 306 NR_146071 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr2-236 chr2 135701559 135701791 + 30.5 0.000 intron (NM_001282798, intron 20 of 25) MER44D|DNA|TcMar-Tigger 36278 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA chr22-96 chr22 39523281 39523513 + 30.5 0.000 TTS (NM_001675) TTS (NM_001675) 2833 NM_182810 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chr12-138 chr12 53180070 53180302 + 30.5 0.000 promoter-TSS (NM_001004304) promoter-TSS (NM_001004304) 460 NM_015989 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr13-24 chr13 29702907 29703139 + 30.5 0.000 Intergenic Intergenic 55330 NR_135320 102723345 Hs.121353 NR_135320 LOC102723345 - uncharacterized LOC102723345 ncRNA chr19-162 chr19 56839212 56839444 + 30.5 0.000 intron (NR_161476, intron 1 of 3) intron (NR_161476, intron 1 of 3) 1398 NM_001369728 5178 Hs.731875 NM_006210 ENSG00000198300 PEG3 PW1|ZKSCAN22|ZNF904|ZSCAN24 paternally expressed 3 protein-coding chr11-180 chr11 31555029 31555261 + 30.5 0.000 intron (NM_001288725, intron 3 of 10) intron (NM_001288725, intron 3 of 10) 45378 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr16-115 chr16 58638279 58638511 + 30.5 0.000 Intergenic LTR8B|LTR|ERV1 -8569 NM_001265612 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr5-182 chr5 77301616 77301848 + 30.3 0.000 intron (NM_001349749, intron 2 of 22) intron (NM_001349749, intron 2 of 22) 91052 NM_001029851 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr20-45 chr20 4226024 4226256 + 30.3 0.000 intron (NM_000678, intron 1 of 1) intron (NM_000678, intron 1 of 1) 23147 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr6-322 chr6 13355637 13355869 + 30.3 0.000 Intergenic Intergenic -27170 NM_001258457 51256 Hs.484678 NM_016495 ENSG00000145979 TBC1D7 MGCPH|PIG51|TBC7 TBC1 domain family member 7 protein-coding chr9-276 chr9 16871993 16872225 + 30.3 0.000 Intergenic Intergenic -1439 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr11-425 chr11 27282012 27282244 + 30.3 0.000 Intergenic Intergenic -62015 NR_125766 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr15-147 chr15 66416114 66416346 + 30.3 0.000 intron (NM_002755, intron 1 of 10) intron (NM_002755, intron 1 of 10) 29357 NM_002755 5604 Hs.145442 NM_002755 ENSG00000169032 MAP2K1 CFC3|MAPKK1|MEK1|MKK1|PRKMK1 mitogen-activated protein kinase kinase 1 protein-coding chr9-149 chr9 17135421 17135653 + 30.1 0.000 intron (NM_001286984, intron 1 of 2) CpG 497 NM_017738 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr6-49 chr6 108947604 108947836 + 30.1 0.000 intron (NM_001286609, intron 11 of 16) intron (NM_001286609, intron 11 of 16) -23617 NR_104137 101929716 NR_104137 ARMC2-AS1 - ARMC2 antisense RNA 1 ncRNA chr14-91 chr14 49862678 49862910 + 30.1 0.000 promoter-TSS (NR_027260) promoter-TSS (NR_027260) 55 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr22-93 chr22 29766720 29766952 + 30.1 0.000 promoter-TSS (NM_001003684) promoter-TSS (NM_001003684) 144 NM_019103 55954 Hs.713647 NM_019103 ENSG00000100319 ZMAT5 SNRNP20|U11/U12-20K|ZC3H19 zinc finger matrin-type 5 protein-coding chr3-49 chr3 57692533 57692765 + 29.9 0.000 promoter-TSS (NR_135550) promoter-TSS (NR_135550) 428 NM_152678 201627 Hs.91085 NM_152678 ENSG00000174839 DENND6A AFI1A|FAM116A DENN domain containing 6A protein-coding chr16-162 chr16 79767760 79767992 + 29.9 0.000 intron (NR_104663, intron 2 of 5) intron (NR_104663, intron 2 of 5) -2595 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chrY-1 chrY 11721889 11722121 + 29.9 0.000 Intergenic (GAATG)n|Satellite|Satellite 699585 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr10-145 chr10 58275961 58276193 + 29.9 0.000 intron (NM_018464, intron 1 of 2) Tigger19b|DNA|TcMar-Tigger 6915 NM_018464 55847 Hs.370102 NM_018464 ENSG00000122873 CISD1 C10orf70|MDS029|ZCD1|mitoNEET CDGSH iron sulfur domain 1 protein-coding chr14-146 chr14 55075681 55075913 + 29.9 0.000 Intergenic Intergenic 24150 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding chr2-119 chr2 172783099 172783331 + 29.9 0.000 intron (NM_007023, intron 1 of 30) LTR84b|LTR|ERVL -38372 NM_001100397 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr1-223 chr1 155084853 155085085 + 29.9 0.000 intron (NM_004952, intron 1 of 4) CpG 6132 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr3-224 chr3 114746010 114746242 + 29.9 0.000 intron (NM_001164343, intron 4 of 11) intron (NM_001164343, intron 4 of 11) -2601 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA chr1-282 chr1 150808211 150808443 + 29.7 0.000 promoter-TSS (NM_000396) promoter-TSS (NM_000396) -67 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding chr9-134 chr9 22084810 22085042 + 29.7 0.000 intron (NR_003529, intron 12 of 18) intron (NR_003529, intron 12 of 18) -75613 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr5-260 chr5 174532638 174532870 + 29.7 0.000 Intergenic Intergenic -191828 NM_001363626 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr1-454 chr1 14945526 14945758 + 29.7 0.000 promoter-TSS (NM_001017999) promoter-TSS (NM_001017999) -277 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr7-203 chr7 38321677 38321909 + 29.7 0.000 Intergenic Intergenic -19784 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chr7-404 chr7 151273522 151273754 + 29.7 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) 3096 NM_001003802 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr11-197 chr11 86116371 86116603 + 29.7 0.000 Intergenic Intergenic -46627 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr11-196 chr11 78365450 78365682 + 29.7 0.000 intron (NM_080491, intron 1 of 9) intron (NM_080491, intron 1 of 9) -23686 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding chr5-60 chr5 134758733 134758965 + 29.7 0.000 promoter-TSS (NR_125341) promoter-TSS (NR_125341) 70 NM_014829 9879 Hs.406549 NM_014829 ENSG00000145833 DDX46 PRPF5|Prp5 DEAD-box helicase 46 protein-coding chr10-37 chr10 29409824 29410056 + 29.7 0.000 promoter-TSS (NR_110928) promoter-TSS (NR_110928) -303 NR_110928 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr13-27 chr13 87671129 87671361 + 29.7 0.000 promoter-TSS (NR_033829) promoter-TSS (NR_033829) -282 NR_033829 642345 Hs.508337 NR_033829 ENSG00000228824 MIR4500HG - MIR4500 host gene ncRNA chr6-83 chr6 43096762 43096994 + 29.7 0.000 intron (NM_001270398, intron 1 of 19) intron (NM_001270398, intron 1 of 19) 20064 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr8-34 chr8 117520589 117520821 + 29.7 0.000 promoter-TSS (NM_080651) promoter-TSS (NM_080651) -8 NM_001363182 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding chr16-103 chr16 57628462 57628694 + 29.5 0.000 promoter-TSS (NM_201525) promoter-TSS (NM_201525) -52 NM_001370429 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr11-370 chr11 117259470 117259702 + 29.5 0.000 intron (NM_001077239, intron 6 of 14) L1ME2z|LINE|L1 26850 NM_001077239 257160 Hs.591934 NM_207343 ENSG00000167257 RNF214 - ring finger protein 214 protein-coding chr14-98 chr14 75515210 75515442 + 29.5 0.000 Intergenic Intergenic -7143 NM_006399 10538 Hs.509964 NM_006399 ENSG00000156127 BATF B-ATF|BATF1|SFA-2|SFA2 basic leucine zipper ATF-like transcription factor protein-coding chr1-519 chr1 232472840 232473072 + 29.5 0.000 intron (NM_020808, intron 5 of 20) intron (NM_020808, intron 5 of 20) 42652 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr14-106 chr14 105171142 105171374 + 29.5 0.000 Intergenic Intergenic -2482 NM_002226 3714 Hs.433445 NM_002226 ENSG00000184916 JAG2 HJ2|SER2 jagged canonical Notch ligand 2 protein-coding chr15-43 chr15 45402089 45402321 + 29.5 0.000 promoter-TSS (NM_001321015) promoter-TSS (NM_001321015) 22 NM_001321015 2628 Hs.75335 NM_001482 ENSG00000171766 GATM AGAT|AT|CCDS3 glycine amidinotransferase protein-coding chr17-199 chr17 26594795 26595027 + 29.5 0.000 Intergenic ALR/Alpha|Satellite|centr 494330 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr3-119 chr3 124837883 124838115 + 29.5 0.000 intron (NM_001354766, intron 5 of 13) intron (NM_001354766, intron 5 of 13) 49366 NM_002213 3693 Hs.13155 NM_002213 ENSG00000082781 ITGB5 - integrin subunit beta 5 protein-coding chr1-179 chr1 212432889 212433121 + 29.5 0.000 promoter-TSS (NR_026598) promoter-TSS (NR_026598) 85 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr14-50 chr14 50396735 50396967 + 29.5 0.000 promoter-TSS (NM_004196) promoter-TSS (NM_004196) 30 NM_004196 8814 Hs.280881 NM_004196 ENSG00000100490 CDKL1 KKIALRE|P42 cyclin dependent kinase like 1 protein-coding chr12-111 chr12 1593314 1593546 + 29.3 0.000 exon (NM_152441, exon 1 of 2) exon (NM_152441, exon 1 of 2) 1151 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding KI270729.1-6 KI270729.1 4350 4582 + 29.3 0.000 NA NA NA NA chr6-203 chr6 28306447 28306679 + 29.3 0.000 Intergenic L1PB1|LINE|L1 25026 NM_001184743 84547 Hs.144527 NM_032507 ENSG00000137338 PGBD1 HUCEP-4|SCAND4|dJ874C20.4 piggyBac transposable element derived 1 protein-coding chr10-163 chr10 122154530 122154762 + 29.3 0.000 intron (NM_206862, intron 7 of 22) intron (NM_206862, intron 7 of 22) -8984 NM_206860 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr1-455 chr1 15212652 15212884 + 29.3 0.000 intron (NM_001319665, intron 2 of 3) intron (NM_001319665, intron 2 of 3) -34457 NM_052929 114827 Hs.659997 NM_052929 ENSG00000142621 FHAD1 - forkhead associated phosphopeptide binding domain 1 protein-coding chr1-379 chr1 193115681 193115913 + 29.3 0.000 Intergenic L1MCa|LINE|L1 -6161 NM_024529 79577 Hs.378996 NM_024529 ENSG00000134371 CDC73 C1orf28|FIHP|HPTJT|HRPT1|HRPT2|HYX cell division cycle 73 protein-coding chr1-138 chr1 40708968 40709200 + 29.3 0.000 promoter-TSS (NM_001308115) promoter-TSS (NM_001308115) -282 NM_001308115 4802 Hs.713051 NM_014223 ENSG00000066136 NFYC CBF-C|CBFC|H1TF2A|HAP5|HSM|NF-YC nuclear transcription factor Y subunit gamma protein-coding chr8-37 chr8 25188280 25188512 + 29.3 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 3707 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr3-94 chr3 158168170 158168402 + 29.1 0.000 intron (NM_001271834, intron 3 of 8) MLT1H2|LTR|ERVL-MaLR 58197 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding chr5-21 chr5 8457446 8457678 + 29.1 0.000 promoter-TSS (NR_039984) promoter-TSS (NR_039984) 2 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr7-48 chr7 100889756 100889988 + 29.1 0.000 promoter-TSS (NM_001015072) promoter-TSS (NM_001015072) -157 NM_001015072 402682 Hs.534845 NM_001015072 ENSG00000176125 UFSP1 UFSP UFM1 specific peptidase 1 (inactive) protein-coding chr11-154 chr11 65535776 65536008 + 29.1 0.000 intron (NM_020680, intron 10 of 17) intron (NM_020680, intron 10 of 17) 10809 NM_001048218 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr16-146 chr16 88063268 88063500 + 29.1 0.000 intron (NM_001173539, intron 11 of 12) intron (NM_001173539, intron 11 of 12) 37601 NR_120310 400553 Hs.592071 NR_120310 ENSG00000205037 LOC400553 - uncharacterized LOC400553 ncRNA chr15-94 chr15 38072839 38073071 + 29.1 0.000 promoter-TSS (NR_147201) promoter-TSS (NR_147201) 35 NR_147199 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr14-51 chr14 68786999 68787231 + 29.1 0.000 TTS (NM_004926) TTS (NM_004926) 6799 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr8-112 chr8 74350434 74350666 + 28.9 0.000 exon (NM_001362931, exon 1 of 6) exon (NM_001362931, exon 1 of 6) 147 NM_018972 54332 Hs.168950 NM_018972 ENSG00000104381 GDAP1 CMT4|CMT4A|CMTRIA ganglioside induced differentiation associated protein 1 protein-coding chr17-326 chr17 68354370 68354602 + 28.9 0.000 intron (NM_001352899, intron 5 of 12) intron (NM_001352899, intron 5 of 12) -59137 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr5-496 chr5 53060394 53060626 + 28.9 0.000 intron (NR_073106, intron 11 of 29) MIRb|SINE|MIR 49247 NM_004531 4338 Hs.163645 NM_004531 ENSG00000164172 MOCS2 MCBPE|MOCO1|MOCODB|MPTS molybdenum cofactor synthesis 2 protein-coding chr22-88 chr22 40108141 40108373 + 28.9 0.000 intron (NM_001024843, intron 1 of 23) intron (NM_001024843, intron 1 of 23) 63440 NM_001024843 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr3-350 chr3 24867858 24868090 + 28.9 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 38651 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-690 chr3 8444397 8444629 + 28.9 0.000 intron (NR_033378, intron 3 of 3) intron (NR_033378, intron 3 of 3) 57145 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA chr3-330 chr3 149736184 149736416 + 28.9 0.000 Intergenic Intergenic -11512 NM_001348362 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr18-83 chr18 22032406 22032638 + 28.9 0.000 Intergenic Intergenic 136446 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA chr11-741 chr11 122137403 122137635 + 28.9 0.000 intron (NR_137184, intron 1 of 1) intron (NR_137184, intron 1 of 1) 9074 NR_029477 406882 NR_029477 ENSG00000198975 MIRLET7A2 LET7A2|MIRNLET7A2|let-7a-2 microRNA let-7a-2 ncRNA chr1-219 chr1 94118114 94118346 + 28.7 0.000 intron (NM_000350, intron 1 of 49) MIRb|SINE|MIR 2918 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr6-20 chr6 99520938 99521170 + 28.7 0.000 promoter-TSS (NM_001195131) promoter-TSS (NM_001195131) 60 NM_001195131 100130890 Hs.634506 NM_001195131 ENSG00000279170 TSTD3 - thiosulfate sulfurtransferase like domain containing 3 protein-coding chr15-101 chr15 98155045 98155277 + 28.7 0.000 Intergenic L2a|LINE|L2 -66408 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr6-59 chr6 35297705 35297937 + 28.7 0.000 promoter-TSS (NM_022047) promoter-TSS (NM_022047) 3 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr10-162 chr10 118046862 118047094 + 28.7 0.000 promoter-TSS (NM_001330167) promoter-TSS (NM_001330167) -37 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr15-95 chr15 39531003 39531235 + 28.7 0.000 Intergenic Intergenic -49960 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr15-26 chr15 79923822 79924054 + 28.7 0.000 promoter-TSS (NM_001199760) promoter-TSS (NM_001199760) -184 NR_037653 400410 Hs.729127 NM_001100879 ENSG00000180953 ST20 HCCS-1 suppressor of tumorigenicity 20 protein-coding chr4-181 chr4 77172394 77172626 + 28.5 0.000 Intergenic Intergenic 15303 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr2-292 chr2 236008035 236008267 + 28.5 0.000 intron (NM_001037131, intron 13 of 17) intron (NM_001037131, intron 13 of 17) 160235 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr3-594 chr3 197906642 197906874 + 28.5 0.000 intron (NM_001323029, intron 9 of 11) ERVL-E-int|LTR|ERVL 43167 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr12-320 chr12 114914333 114914565 + 28.5 0.000 Intergenic Intergenic -230274 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr12-117 chr12 47604422 47604654 + 28.5 0.000 Intergenic Intergenic 101492 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr8-544 chr8 107863439 107863671 + 28.5 0.000 Intergenic L1PB1|LINE|L1 218384 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chr11-167 chr11 95151534 95151766 + 28.5 0.000 non-coding (NR_110303, exon 1 of 3) non-coding (NR_110303, exon 1 of 3) 1111 NR_110303 101929295 Hs.735838 NR_110303 ENSG00000245552 LOC101929295 - uncharacterized LOC101929295 ncRNA chr1-68 chr1 54272960 54273192 + 28.5 0.000 intron (NM_018070, intron 5 of 16) intron (NM_018070, intron 5 of 16) 36633 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr11-335 chr11 3723093 3723325 + 28.5 0.000 exon (NM_001365127, exon 16 of 33) exon (NM_001365127, exon 16 of 33) -51825 NM_001303035 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr12-255 chr12 55721833 55722065 + 28.5 0.000 intron (NR_037658, intron 4 of 5) intron (NR_037658, intron 4 of 5) 1556 NM_002905 5959 Hs.600940 NM_002905 ENSG00000135437 RDH5 9cRDH|HSD17B9|RDH1|SDR9C5 retinol dehydrogenase 5 protein-coding chr4-313 chr4 185589174 185589406 + 28.5 0.000 intron (NM_001145672, intron 20 of 20) intron (NM_001145672, intron 20 of 20) -53732 NM_001257962 27295 Hs.701364 NM_014476 ENSG00000154553 PDLIM3 ALP PDZ and LIM domain 3 protein-coding chr14-140 chr14 100979810 100980042 + 28.5 0.000 intron (NR_146000, intron 36 of 50) intron (NR_146000, intron 36 of 50) -1078 NR_003213 767598 NR_003213 ENSG00000202048 SNORD114-20 14q(II-20) small nucleolar RNA, C/D box 114-20 snoRNA chr6-250 chr6 154937651 154937883 + 28.5 0.000 Intergenic Intergenic 84407 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr1-248 chr1 160285014 160285246 + 28.3 0.000 promoter-TSS (NR_036493) promoter-TSS (NR_036493) 21 NM_002857 5824 Hs.517232 NM_002857 ENSG00000162735 PEX19 D1S2223E|HK33|PBD12A|PMP1|PMPI|PXF|PXMP1 peroxisomal biogenesis factor 19 protein-coding chr3-294 chr3 142501285 142501517 + 28.3 0.000 intron (NM_001354579, intron 29 of 45) intron (NM_001354579, intron 29 of 45) -53339 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr3-61 chr3 39867764 39867996 + 28.3 0.000 intron (NM_001284424, intron 1 of 15) L1MA9|LINE|L1 58220 NM_001284425 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr3-22 chr3 160565628 160565860 + 28.3 0.000 promoter-TSS (NM_002268) promoter-TSS (NM_002268) -173 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding chr16-279 chr16 75293879 75294111 + 28.3 0.000 exon (NM_006324, exon 7 of 7) exon (NM_006324, exon 7 of 7) -25988 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr8-229 chr8 123269137 123269369 + 28.3 0.000 intron (NR_037873, intron 1 of 3) intron (NR_037873, intron 1 of 3) 5033 NM_001204180 100533106 Hs.707401 NM_001204180 ENSG00000259305 ZHX1-C8orf76 - ZHX1-C8orf76 readthrough protein-coding chr3-161 chr3 73547076 73547308 + 28.3 0.000 intron (NR_121660, intron 1 of 1) intron (NR_121660, intron 1 of 1) 14388 NM_001303140 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chrY-2 chrY 11295808 11296040 + 28.3 0.000 Intergenic Intergenic 1125666 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr2-745 chr2 240485457 240485689 + 28.3 0.000 intron (NM_017844, intron 11 of 13) L1M4b|LINE|L1 -28873 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr13-267 chr13 37831710 37831942 + 28.3 0.000 intron (NM_003306, intron 1 of 10) L1MA7|LINE|L1 38599 NM_003306 7223 Hs.262960 NM_003306 ENSG00000133107 TRPC4 HTRP-4|HTRP4|TRP4 transient receptor potential cation channel subfamily C member 4 protein-coding chr10-264 chr10 110326484 110326716 + 28.1 0.000 Intergenic L2a|LINE|L2 -21680 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr22-340 chr22 36223795 36224027 + 28.1 0.000 Intergenic ERVL-int|LTR|ERVL 15616 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chr9-106 chr9 99821452 99821684 + 28.1 0.000 promoter-TSS (NM_173199) promoter-TSS (NM_173199) -287 NM_173200 8013 Hs.279522 NM_006981 ENSG00000119508 NR4A3 CHN|CSMF|MINOR|NOR1|TEC nuclear receptor subfamily 4 group A member 3 protein-coding chr16-126 chr16 81007045 81007277 + 28.1 0.000 promoter-TSS (NM_001351968) promoter-TSS (NM_001351968) -242 NR_147838 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr9-155 chr9 69223525 69223757 + 28.1 0.000 intron (NM_001369870, intron 6 of 23) intron (NM_001369870, intron 6 of 23) 18486 NM_001170416 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr15-134 chr15 77455762 77455994 + 28.1 0.000 intron (NM_018200, intron 2 of 10) intron (NM_018200, intron 2 of 10) 34990 NM_001304504 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr5-157 chr5 67094639 67094871 + 28.1 0.000 intron (NM_001290226, intron 4 of 26) intron (NM_001290226, intron 4 of 26) 90100 NM_001290227 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-165 chr2 23927235 23927467 + 28.1 0.000 promoter-TSS (NM_001354107) promoter-TSS (NM_001354107) -228 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr6-576 chr6 110528331 110528563 + 28.1 0.000 Intergenic Intergenic -51834 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding chrX-27 chrX 15790449 15790681 + 28.1 0.000 intron (NM_005089, intron 1 of 10) CpG 114 NM_005089 8233 Hs.171909 NM_005089 ENSG00000169249 ZRSR2 U2AF1-RS2|U2AF1L2|U2AF1RS2|URP|ZC3H22 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 protein-coding chr20-35 chr20 28602774 28603006 + 28.1 0.000 promoter-TSS (NR_132315) promoter-TSS (NR_132315) -225 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo chr1-1372 chr1 65924664 65924896 + 28.1 0.000 intron (NM_002600, intron 3 of 16) MLT1F2|LTR|ERVL-MaLR 11535 NM_001297441 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr7-243 chr7 125134594 125134826 + 28.1 0.000 intron (NR_125719, intron 6 of 7) MLT1A0-int|LTR|ERVL-MaLR -49859 NR_110188 101928283 Hs.566650 NR_110188 ENSG00000224897 LOC101928283 - uncharacterized LOC101928283 ncRNA chr5-197 chr5 14245260 14245492 + 28.1 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 102034 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr5-127 chr5 142814213 142814445 + 28.1 0.000 intron (NM_001349547, intron 1 of 21) intron (NM_001349547, intron 1 of 21) 43102 NM_001349547 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr7-257 chr7 5518941 5519173 + 28.1 0.000 intron (NR_126168, intron 1 of 3) L2a|LINE|L2 5203 NR_126168 221946 Hs.385633 NR_126168 LOC221946 - uncharacterized LOC221946 ncRNA chr1-376 chr1 179877761 179877993 + 28.1 0.000 promoter-TSS (NM_001349935) promoter-TSS (NM_001349935) -74 NM_001349934 163590 Hs.571797 NM_022347 ENSG00000169905 TOR1AIP2 IFRG15|LULL1|NET9 torsin 1A interacting protein 2 protein-coding chr15-174 chr15 60606036 60606268 + 28.1 0.000 intron (NR_120342, intron 5 of 5) intron (NR_120342, intron 5 of 5) -13626 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr3-186 chr3 128794990 128795222 + 28.1 0.000 intron (NM_004637, intron 1 of 5) intron (NM_004637, intron 1 of 5) -51702 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr15-110 chr15 77144656 77144888 + 28.1 0.000 intron (NM_024776, intron 6 of 7) intron (NM_024776, intron 6 of 7) -73663 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr4-652 chr4 151936260 151936492 + 28.1 0.000 Intergenic MIR|SINE|MIR -164377 NR_121628 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr9-427 chr9 80648886 80649118 + 27.9 0.000 Intergenic Intergenic 673979 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr7-217 chr7 135672984 135673216 + 27.9 0.000 intron (NM_001130929, intron 2 of 2) intron (NM_001130929, intron 2 of 2) 10586 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr20-32 chr20 59011225 59011457 + 27.9 0.000 Intergenic Intergenic -4087 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr1-434 chr1 228296457 228296689 + 27.9 0.000 intron (NM_052843, intron 43 of 80) intron (NM_052843, intron 43 of 80) -82909 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr13-55 chr13 99229045 99229277 + 27.9 0.000 intron (NR_026644, intron 1 of 8) intron (NR_026644, intron 1 of 8) 28307 NM_177967 337867 Hs.508545 NM_177967 ENSG00000134882 UBAC2 PHGDHL1 UBA domain containing 2 protein-coding chr20-216 chr20 36309820 36310052 + 27.9 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 3597 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr2-290 chr2 234970523 234970755 + 27.9 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) 5300 NM_001371302 chr9-154 chr9 35103078 35103310 + 27.9 0.000 promoter-TSS (NM_001287032) promoter-TSS (NM_001287032) 1 NM_001287031 30968 Hs.3439 NM_013442 ENSG00000165283 STOML2 HSPC108|SLP-2 stomatin like 2 protein-coding chr5-548 chr5 173917941 173918173 + 27.9 0.000 intron (NM_001308193, intron 2 of 7) intron (NM_001308193, intron 2 of 7) 25006 NM_001308193 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr11-271 chr11 36034976 36035208 + 27.9 0.000 intron (NM_001304264, intron 1 of 5) L2b|LINE|L2 24994 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chrX-85 chrX 141468959 141469191 + 27.7 0.000 Intergenic UCON18|Unknown|Unknown -33774 NR_037183 619455 Hs.590784 NR_037183 ENSG00000277215 SPANXA2-OT1 CXorf18 SPANXA2 overlapping transcript 1 ncRNA chr19-163 chr19 58543716 58543948 + 27.7 0.000 promoter-TSS (NM_005762) promoter-TSS (NM_005762) -232 NM_005762 10155 Hs.467408 NM_005762 ENSG00000130726 TRIM28 KAP1|PPP1R157|RNF96|TF1B|TIF1B tripartite motif containing 28 protein-coding chr15-48 chr15 45631503 45631735 + 27.7 0.000 intron (NM_001271213, intron 1 of 10) intron (NM_001271213, intron 1 of 10) 471 NM_001271213 58472 Hs.511251 NM_021199 ENSG00000137767 SQOR CGI-44|PRO1975|SQR|SQRDL sulfide quinone oxidoreductase protein-coding chr10-146 chr10 59362336 59362568 + 27.7 0.000 promoter-TSS (NM_198215) promoter-TSS (NM_198215) 97 NM_198215 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding chr19-133 chr19 52028271 52028503 + 27.7 0.000 promoter-TSS (NM_025040) promoter-TSS (NM_025040) -8 NM_025040 80110 Hs.292336 NM_025040 ENSG00000142556 ZNF614 - zinc finger protein 614 protein-coding chr8-205 chr8 32766267 32766499 + 27.7 0.000 3' UTR (NM_001159995, exon 11 of 11) 3' UTR (NM_001159995, exon 11 of 11) 44548 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr4-387 chr4 149337103 149337335 + 27.7 0.000 Intergenic L1PA7|LINE|L1 182924 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr3-480 chr3 27686632 27686864 + 27.7 0.000 Intergenic Intergenic 35575 NM_005442 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding chr8-142 chr8 118025303 118025535 + 27.5 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 86400 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr10-240 chr10 16968532 16968764 + 27.5 0.000 intron (NM_001081, intron 31 of 66) intron (NM_001081, intron 31 of 66) -151194 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr14-134 chr14 68959003 68959235 + 27.5 0.000 intron (NM_001102, intron 1 of 20) L4_C_Mam|LINE|RTE-X 20183 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr18-85 chr18 24562600 24562832 + 27.5 0.000 Intergenic Intergenic -65466 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr1-461 chr1 19563581 19563813 + 27.5 0.000 Intergenic Intergenic 33135 NR_135054 105378614 Hs.430098 NR_135054 ENSG00000235185 LOC105378614 - uncharacterized LOC105378614 ncRNA chr1-805 chr1 214641472 214641704 + 27.5 0.000 exon (NM_016343, exon 12 of 20) exon (NM_016343, exon 12 of 20) 38393 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr1-422 chr1 147928359 147928591 + 27.5 0.000 promoter-TSS (NM_016334) promoter-TSS (NM_016334) 55 NM_016334 51463 Hs.504320 NM_016334 ENSG00000188092 GPR89B GPHR|GPR89|GPR89C|SH120|UNQ192 G protein-coupled receptor 89B protein-coding chr11-305 chr11 13277284 13277516 + 27.5 0.000 promoter-TSS (NR_147785) promoter-TSS (NR_147785) -327 NM_001178 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr1-343 chr1 8015063 8015295 + 27.5 0.000 intron (NM_018948, intron 3 of 3) intron (NM_018948, intron 3 of 3) 11130 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr1-880 chr1 29202775 29203007 + 27.3 0.000 intron (NR_146214, intron 5 of 10) intron (NR_146214, intron 5 of 10) -20991 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr12-476 chr12 124039456 124039688 + 27.3 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 66357 NM_001204299 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding chr15-200 chr15 96234405 96234637 + 27.3 0.000 intron (NR_125738, intron 2 of 4) intron (NR_125738, intron 2 of 4) -91525 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr10-55 chr10 116742603 116742835 + 27.3 0.000 promoter-TSS (NM_025015) promoter-TSS (NM_025015) -153 NM_025015 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding chr2-293 chr2 237412065 237412297 + 27.3 0.000 intron (NM_057165, intron 1 of 7) intron (NM_057165, intron 1 of 7) 1983 NM_057166 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr1-1501 chr1 170634417 170634649 + 27.3 0.000 Intergenic MamGypsy2-I|LTR|Gypsy -29598 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr1-449 chr1 8005194 8005426 + 27.3 0.000 Intergenic Intergenic 20999 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr12-441 chr12 79615692 79615924 + 27.3 0.000 intron (NM_001354732, intron 3 of 6) AluJb|SINE|Alu 74772 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr17-385 chr17 5630375 5630607 + 27.3 0.000 Intergenic LTR16|LTR|ERVL -45982 NM_014922 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding chr7-363 chr7 46456368 46456600 + 27.3 0.000 Intergenic Intergenic 240638 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr3-888 chr3 162007020 162007252 + 27.3 0.000 Intergenic Intergenic 510328 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr17-256 chr17 80958856 80959088 + 27.3 0.000 intron (NM_020761, intron 29 of 33) intron (NM_020761, intron 29 of 33) 12241 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA KI270591.1-1 KI270591.1 5034 5266 + 27.3 0.000 NA NA NA NA chr2-232 chr2 99490340 99490572 + 27.1 0.000 promoter-TSS (NM_016316) promoter-TSS (NM_016316) -439 NM_001321455 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr1-653 chr1 83901749 83901981 + 27.1 0.000 intron (NM_001350215, intron 17 of 19) intron (NM_001350215, intron 17 of 19) -40869 NR_119375 101927587 Hs.621230 NR_119375 ENSG00000233008 LINC01725 - long intergenic non-protein coding RNA 1725 ncRNA chr11-150 chr11 3130997 3131229 + 27.1 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 34197 NM_145638 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr17-712 chr17 2459505 2459737 + 27.1 0.000 intron (NM_024086, intron 6 of 9) intron (NM_024086, intron 6 of 9) -44185 NR_028335 284009 Hs.632244 NM_001025459 LOC284009 - uncharacterized LOC284009 ncRNA chr2-726 chr2 224401884 224402116 + 27.1 0.000 promoter-TSS (NM_024785) promoter-TSS (NM_024785) -6 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr5-148 chr5 13745647 13745879 + 27.1 0.000 intron (NM_001369, intron 65 of 78) intron (NM_001369, intron 65 of 78) 198717 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr3-561 chr3 140176632 140176864 + 27.1 0.000 intron (NM_022131, intron 2 of 16) intron (NM_022131, intron 2 of 16) 241563 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr12-101 chr12 22979081 22979313 + 27.1 0.000 Intergenic Intergenic -196439 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr3-220 chr3 76987222 76987454 + 27.1 0.000 Intergenic Intergenic -52761 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr12-79 chr12 104177757 104177989 + 27.1 0.000 Intergenic Intergenic -37906 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr5-138 chr5 112707480 112707712 + 27.1 0.000 promoter-TSS (NM_001354897) promoter-TSS (NM_001354897) 98 NM_001127511 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr3-893 chr3 167933047 167933279 + 27.1 0.000 Intergenic Charlie10|DNA|hAT-Charlie 37215 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo chr2-563 chr2 224922367 224922599 + 27.1 0.000 intron (NM_001290263, intron 2 of 55) intron (NM_001290263, intron 2 of 55) 24566 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr12-126 chr12 118307624 118307856 + 27.1 0.000 intron (NM_001346490, intron 1 of 21) intron (NM_001346490, intron 1 of 21) 51965 NM_001346489 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr16-137 chr16 71895225 71895457 + 26.9 0.000 promoter-TSS (NM_001270977) promoter-TSS (NM_001270977) -152 NM_001270979 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr2-448 chr2 46500201 46500433 + 26.9 0.000 Intergenic Intergenic 20752 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr18-29 chr18 3261836 3262068 + 26.9 0.000 promoter-TSS (NM_001144945) promoter-TSS (NM_001144945) -134 NR_130143 104968399 Hs.464472 NR_130143 ENSG00000264235 LOC104968399 - uncharacterized LOC104968399 ncRNA chr16-256 chr16 85557774 85558006 + 26.9 0.000 Intergenic Intergenic -53519 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr19-132 chr19 51339723 51339955 + 26.9 0.000 intron (NM_001163922, intron 4 of 9) CpG 2285 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr9-221 chr9 98205897 98206129 + 26.9 0.000 intron (NR_051978, intron 8 of 11) AluSc|SINE|Alu 7538 NM_001267572 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr15-63 chr15 40340905 40341137 + 26.9 0.000 promoter-TSS (NM_207380) promoter-TSS (NM_207380) -54 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chr7-271 chr7 42144639 42144871 + 26.9 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 92454 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr1-296 chr1 224168931 224169163 + 26.9 0.000 Intergenic MIRb|SINE|MIR -14193 NM_001321541 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr14-171 chr14 74251663 74251895 + 26.9 0.000 intron (NM_182894, intron 3 of 4) intron (NM_182894, intron 3 of 4) 12330 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr21-119 chr21 45226401 45226633 + 26.9 0.000 TTS (NR_027673) TTS (NR_027673) -7823 NR_135279 114042 Hs.375832 NR_135279 ENSG00000182586 LINC00334 C21orf89|NCRNA00334 long intergenic non-protein coding RNA 334 ncRNA chr1-942 chr1 88731513 88731745 + 26.9 0.000 intron (NM_001320708, intron 1 of 20) MIR3|SINE|MIR -46425 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr6-87 chr6 82750705 82750937 + 26.9 0.000 Intergenic Intergenic 315020 NM_001350602 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr1-294 chr1 207825773 207826005 + 26.9 0.000 Intergenic Intergenic -3186 NR_135298 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chr16-258 chr16 87790070 87790302 + 26.9 0.000 Intergenic Intergenic -11038 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr16-727 chr16 89905195 89905427 + 26.9 0.000 intron (NM_014972, intron 14 of 17) intron (NM_014972, intron 14 of 17) -12568 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr1-1550 chr1 205144937 205145169 + 26.9 0.000 3' UTR (NM_015375, exon 13 of 13) 3' UTR (NM_015375, exon 13 of 13) -23075 NM_001193273 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr7-187 chr7 101126894 101127126 + 26.9 0.000 promoter-TSS (NM_000602) promoter-TSS (NM_000602) -79 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr18-98 chr18 79868834 79869066 + 26.9 0.000 intron (NM_012283, intron 1 of 1) intron (NM_012283, intron 1 of 1) 5282 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr4-249 chr4 57111091 57111323 + 26.9 0.000 promoter-TSS (NM_001253835) promoter-TSS (NM_001253835) -822 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr13-82 chr13 101640947 101641179 + 26.7 0.000 intron (NM_001271754, intron 6 of 10) intron (NM_001271754, intron 6 of 10) 151111 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr12-125 chr12 109111159 109111391 + 26.7 0.000 TTS (NM_080911) TTS (NM_080911) -5312 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr1-306 chr1 26123431 26123663 + 26.7 0.000 3' UTR (NM_001243532, exon 3 of 3) 3' UTR (NM_001243532, exon 3 of 3) 11723 NM_152835 149420 Hs.468801 NM_152835 ENSG00000175087 PDIK1L CLIK1L|STK35L2 PDLIM1 interacting kinase 1 like protein-coding chr7-212 chr7 121961186 121961418 + 26.7 0.000 intron (NM_001206839, intron 2 of 28) intron (NM_001206839, intron 2 of 28) 88141 NM_001369395 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr6-251 chr6 155273526 155273758 + 26.7 0.000 intron (NM_001001346, intron 1 of 1) intron (NM_001001346, intron 1 of 1) 9629 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr6-337 chr6 37868454 37868686 + 26.7 0.000 intron (NM_021943, intron 1 of 5) intron (NM_021943, intron 1 of 5) 48843 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr2-271 chr2 85755569 85755801 + 26.7 0.000 intron (NM_032827, intron 1 of 2) intron (NM_032827, intron 1 of 2) 1694 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr2-438 chr2 36433598 36433830 + 26.7 0.000 intron (NM_016441, intron 2 of 16) MER5B|DNA|hAT-Charlie 77936 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr22-183 chr22 28442815 28443047 + 26.7 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -16938 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr17-210 chr17 80455198 80455430 + 26.7 0.000 Intergenic CpG 21293 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr8-249 chr8 461753 461985 + 26.7 0.000 intron (NM_183421, intron 8 of 10) L1MB8|LINE|L1 53883 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr4-129 chr4 80036940 80037172 + 26.7 0.000 intron (NM_001286781, intron 7 of 16) intron (NM_001286781, intron 7 of 16) 36173 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr11-414 chr11 3706424 3706656 + 26.5 0.000 exon (NM_001365127, exon 21 of 33) exon (NM_001365127, exon 21 of 33) -35156 NM_001303035 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr12-77 chr12 94459921 94460153 + 26.5 0.000 promoter-TSS (NM_001346459) promoter-TSS (NM_001346459) 34 NR_027035 144486 Hs.118205 NR_027035 ENSG00000278916 CEP83-DT CCDC41-AS1|CEP83-AS1 CEP83 divergent transcript ncRNA chr22-75 chr22 20393988 20394220 + 26.5 0.000 promoter-TSS (NM_003426) promoter-TSS (NM_003426) -11 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr10-189 chr10 66322291 66322523 + 26.5 0.000 intron (NM_001127384, intron 12 of 17) L1MEc|LINE|L1 -603629 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr9-173 chr9 2424636 2424868 + 26.5 0.000 Intergenic Intergenic -197035 NM_001322226 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr13-334 chr13 100132170 100132402 + 26.5 0.000 intron (NR_148031, intron 4 of 22) L1MD2|LINE|L1 43193 NM_001352612 5095 Hs.80741 NM_000282 ENSG00000175198 PCCA - propionyl-CoA carboxylase subunit alpha protein-coding chr1-341 chr1 3170817 3171049 + 26.5 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 42958 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr7-83 chr7 73851452 73851684 + 26.5 0.000 Intergenic Intergenic -9052 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr5-25 chr5 38323896 38324128 + 26.5 0.000 intron (NM_152403, intron 1 of 21) AluSz|SINE|Alu -33026 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA chr1-515 chr1 221612592 221612824 + 26.5 0.000 Intergenic Intergenic 124192 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr8-332 chr8 97944223 97944455 + 26.5 0.000 intron (NM_002380, intron 4 of 18) intron (NM_002380, intron 4 of 18) 75275 NM_001317748 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr10-166 chr10 3785313 3785545 + 26.5 0.000 promoter-TSS (NM_001160124) promoter-TSS (NM_001160124) -148 NM_001160125 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr6-66 chr6 90479330 90479562 + 26.5 0.000 Intergenic Intergenic 107626 NM_003188 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr15-374 chr15 42650454 42650686 + 26.5 0.000 intron (NM_020759, intron 7 of 32) L2b|LINE|L2 74964 NM_020759 57519 Hs.122061 NM_020759 ENSG00000159433 STARD9 KIF16A StAR related lipid transfer domain containing 9 protein-coding chr13-56 chr13 111187926 111188158 + 26.5 0.000 intron (NM_001113513, intron 1 of 19) MLT1F1|LTR|ERVL-MaLR 1248 NM_001113513 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr3-389 chr3 142828824 142829056 + 26.5 0.000 intron (NM_013363, intron 6 of 8) intron (NM_013363, intron 6 of 8) 60143 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr7-510 chr7 94432092 94432324 + 26.4 0.000 TTS (NM_000089) TTS (NM_000089) 37647 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr6-166 chr6 111973178 111973410 + 26.4 0.000 Intergenic Intergenic -63897 NR_149099 105377946 NR_149099 LINC02527 - long intergenic non-protein coding RNA 2527 ncRNA chr2-318 chr2 62149746 62149978 + 26.4 0.000 Intergenic MER5B|DNA|hAT-Charlie -46253 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr9-122 chr9 124357844 124358076 + 26.4 0.000 non-coding (NR_027406, exon 1 of 1) non-coding (NR_027406, exon 1 of 1) 4487 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr5-103 chr5 149229046 149229278 + 26.4 0.000 intron (NM_001370418, intron 7 of 18) intron (NM_001370418, intron 7 of 18) -42676 NM_001323063 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr12-146 chr12 11652574 11652806 + 26.4 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 2836 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr10-417 chr10 4074171 4074403 + 26.4 0.000 intron (NR_120632, intron 1 of 3) intron (NR_120632, intron 1 of 3) 22561 NR_120632 101927964 Hs.737041 NR_120632 ENSG00000236990 LOC101927964 - uncharacterized LOC101927964 ncRNA chr5-136 chr5 95446108 95446340 + 26.4 0.000 intron (NM_152548, intron 7 of 9) intron (NM_152548, intron 7 of 9) 54858 NM_152548 153643 Hs.276287 NM_152548 ENSG00000153347 FAM81B - family with sequence similarity 81 member B protein-coding chr7-110 chr7 48088739 48088971 + 26.4 0.000 promoter-TSS (NM_001287429) promoter-TSS (NM_001287429) 252 NM_001287426 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding chr18-114 chr18 5888310 5888542 + 26.4 0.000 TTS (NM_001080209) TTS (NM_001080209) 7528 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding chr2-927 chr2 42230745 42230977 + 26.4 0.000 intron (NM_001145076, intron 1 of 21) intron (NM_001145076, intron 1 of 21) -60630 NR_110584 102723824 Hs.639826 NR_110584 LOC102723824 - uncharacterized LOC102723824 ncRNA chr22-26 chr22 37019488 37019720 + 26.4 0.000 promoter-TSS (NM_003312) promoter-TSS (NM_003312) -37 NM_001013436 4357 Hs.248267 NM_021126 ENSG00000128309 MPST MST|TST2|TUM1 mercaptopyruvate sulfurtransferase protein-coding chr2-405 chr2 201909412 201909644 + 26.4 0.000 Intergenic MARNA|DNA|TcMar-Mariner 102949 NM_001261436 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr11-170 chr11 4393695 4393927 + 26.4 0.000 promoter-TSS (NM_003141) promoter-TSS (NM_003141) -109 NM_003141 6737 Hs.532357 NM_003141 ENSG00000132109 TRIM21 RNF81|RO52|Ro/SSA|SSA|SSA1 tripartite motif containing 21 protein-coding chr3-209 chr3 11477808 11478040 + 26.4 0.000 intron (NM_001349238, intron 17 of 17) MLT1K|LTR|ERVL-MaLR 90874 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr9-148 chr9 16964279 16964511 + 26.2 0.000 Intergenic Intergenic -93725 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr12-247 chr12 26918814 26919046 + 26.2 0.000 intron (NM_018164, intron 8 of 16) AluJr|SINE|Alu 19051 NM_018164 55726 Hs.505077 NM_018164 ENSG00000064102 INTS13 ASUN|C12orf11|GCT1|Mat89Bb|NET48|SPATA30 integrator complex subunit 13 protein-coding chr3-192 chr3 149576334 149576566 + 26.2 0.000 intron (NM_001348362, intron 5 of 9) intron (NM_001348362, intron 5 of 9) 81575 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr15-267 chr15 62787403 62787635 + 26.2 0.000 intron (NM_015059, intron 42 of 55) intron (NM_015059, intron 42 of 55) -36438 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr17-522 chr17 9231614 9231846 + 26.2 0.000 intron (NM_004822, intron 6 of 6) intron (NM_004822, intron 6 of 6) -52612 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr10-585 chr10 127149548 127149780 + 26.2 0.000 intron (NM_001039762, intron 5 of 5) intron (NM_001039762, intron 5 of 5) 46927 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr15-173 chr15 59329831 59330063 + 26.2 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 42924 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr5-199 chr5 35046899 35047131 + 26.2 0.000 intron (NM_031900, intron 1 of 13) intron (NM_031900, intron 1 of 13) 934 NM_031900 64902 Hs.34494 NM_031900 ENSG00000113492 AGXT2 AGT2|BAIBA|DAIBAT alanine--glyoxylate aminotransferase 2 protein-coding chr7-818 chr7 123236302 123236534 + 26.2 0.000 Intergenic Intergenic -36447 NM_001324400 6561 Hs.489849 NM_022444 ENSG00000081800 SLC13A1 NAS1|NaSi-1 solute carrier family 13 member 1 protein-coding chr15-52 chr15 84928282 84928514 + 26.2 0.000 intron (NM_001287761, intron 11 of 14) intron (NM_001287761, intron 11 of 14) 43736 NM_201651 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr6-47 chr6 75205940 75206172 + 26.2 0.000 promoter-TSS (NM_004370) promoter-TSS (NM_004370) -3 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr3-382 chr3 122353594 122353826 + 26.2 0.000 Intergenic Intergenic 28462 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr15-159 chr15 39586964 39587196 + 26.2 0.000 intron (NM_003246, intron 7 of 21) L1MA9|LINE|L1 6001 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr5-335 chr5 83793172 83793404 + 26.2 0.000 Intergenic AluJb|SINE|Alu -72433 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding chr18-64 chr18 46939488 46939720 + 26.2 0.000 intron (NR_148563, intron 1 of 17) intron (NR_148563, intron 1 of 17) -7193 NM_031303 83473 Hs.404137 NM_031303 ENSG00000167216 KATNAL2 - katanin catalytic subunit A1 like 2 protein-coding chr2-257 chr2 234964837 234965069 + 26.2 0.000 promoter-TSS (NM_001371302) promoter-TSS (NM_001371302) -386 NM_001371302 chr3-297 chr3 177468422 177468654 + 26.2 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 26617 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr2-683 chr2 163131347 163131579 + 26.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger -292696 NM_033272 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding chr20-233 chr20 47334244 47334476 + 26.2 0.000 intron (NM_001281774, intron 3 of 23) L1MB8|LINE|L1 15858 NR_024594 100131496 Hs.662547 NR_024594 ENSG00000267882 LOC100131496 - uncharacterized LOC100131496 ncRNA chr2-937 chr2 46071824 46072056 + 26.2 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -225467 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr10-300 chr10 1273539 1273771 + 26.2 0.000 intron (NM_018702, intron 3 of 9) intron (NM_018702, intron 3 of 9) 113887 NR_015376 399706 Hs.721191 NM_001010910 ENSG00000229205 LINC00200 C10orf139|NCRNA00200 long intergenic non-protein coding RNA 200 ncRNA chr18-181 chr18 3762557 3762789 + 26.2 0.000 intron (NM_001242762, intron 2 of 9) intron (NM_001242762, intron 2 of 9) 82685 NM_001242766 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding chr3-313 chr3 25493905 25494137 + 26.0 0.000 intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 35711 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr5-133 chr5 43078936 43079168 + 26.0 0.000 intron (NR_102752, intron 2 of 2) intron (NR_102752, intron 2 of 2) -11613 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr21-37 chr21 27108166 27108398 + 26.0 0.000 Intergenic Intergenic -141194 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding chr8-67 chr8 24668871 24669103 + 26.0 0.000 Intergenic Intergenic -120369 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr15-49 chr15 62897142 62897374 + 26.0 0.000 Intergenic Intergenic 73301 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr2-103 chr2 24123292 24123524 + 26.0 0.000 promoter-TSS (NM_199346) promoter-TSS (NM_199346) -61 NM_001145710 375190 Hs.710370 NM_198553 ENSG00000219626 FAM228B - family with sequence similarity 228 member B protein-coding chr14-192 chr14 71711922 71712154 + 26.0 0.000 intron (NM_001354286, intron 18 of 24) intron (NM_001354286, intron 18 of 24) 125740 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr1-497 chr1 151399210 151399442 + 26.0 0.000 promoter-TSS (NM_002796) promoter-TSS (NM_002796) -247 NM_002796 5692 Hs.89545 NM_002796 ENSG00000159377 PSMB4 HN3|HsN3|PRAAS3|PROS-26|PROS26 proteasome subunit beta 4 protein-coding chr1-316 chr1 77539166 77539398 + 26.0 0.000 intron (NM_012093, intron 13 of 13) intron (NM_012093, intron 13 of 13) 143376 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr1-330 chr1 208885043 208885275 + 26.0 0.000 Intergenic Intergenic -87295 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr11-579 chr11 60915522 60915754 + 26.0 0.000 intron (NM_024092, intron 1 of 3) intron (NM_024092, intron 1 of 3) 1480 NM_024092 79073 Hs.13662 NM_024092 ENSG00000110108 TMEM109 - transmembrane protein 109 protein-coding chr11-326 chr11 117203445 117203677 + 26.0 0.000 TTS (NM_004716) TTS (NM_004716) -1647 NR_045215 100652768 Hs.732365 NR_045215 LOC100652768 - uncharacterized LOC100652768 ncRNA chr1-423 chr1 153671084 153671316 + 26.0 0.000 promoter-TSS (NM_001267809) promoter-TSS (NM_001267809) -172 NM_001267809 3608 Hs.75117 NM_004515 ENSG00000143621 ILF2 NF45|PRO3063 interleukin enhancer binding factor 2 protein-coding chr12-439 chr12 77925663 77925895 + 26.0 0.000 intron (NM_001024383, intron 1 of 39) intron (NM_001024383, intron 1 of 39) 94885 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr5-155 chr5 43839243 43839475 + 26.0 0.000 Intergenic Intergenic -236129 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA chr12-210 chr12 33545331 33545563 + 26.0 0.000 Intergenic Intergenic -105628 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding chr3-568 chr3 158471630 158471862 + 26.0 0.000 intron (NM_001271838, intron 7 of 9) intron (NM_001271838, intron 7 of 9) -54962 NR_148407 110599565 NR_148407 UC.134 - long non-coding RNA uc.134 ncRNA chr2-731 chr2 231238720 231238952 + 26.0 0.000 intron (NM_001352757, intron 8 of 19) intron (NM_001352757, intron 8 of 19) 40205 NM_001291656 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr5-181 chr5 72264771 72265003 + 26.0 0.000 intron (NM_001286748, intron 4 of 11) MLT1C|LTR|ERVL-MaLR 55353 NM_001286751 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr17-540 chr17 28485308 28485540 + 26.0 0.000 intron (NM_001145975, intron 1 of 11) intron (NM_001145975, intron 1 of 11) 11780 NM_001346684 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr17-179 chr17 30600413 30600645 + 26.0 0.000 intron (NR_015341, intron 2 of 8) CpG -23789 NR_033420 6459 Hs.684860 NR_033420 SH3GL1P2 CNSA-P2|SH3GLP2 SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2 pseudo chr20-100 chr20 25623910 25624142 + 26.0 0.000 promoter-TSS (NR_126466) promoter-TSS (NR_126466) -12 NM_152667 140838 Hs.143137 NM_152667 ENSG00000170191 NANP C20orf147|HDHD4|dJ694B14.3 N-acetylneuraminic acid phosphatase protein-coding chr3-200 chr3 48064434 48064666 + 26.0 0.000 intron (NM_002375, intron 1 of 18) LTR8|LTR|ERV1 24298 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr1-530 chr1 9240006 9240238 + 25.8 0.000 intron (NM_001282587, intron 1 of 4) intron (NM_001282587, intron 1 of 4) 275 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr4-574 chr4 76951959 76952191 + 25.8 0.000 intron (NM_018243, intron 1 of 9) intron (NM_018243, intron 1 of 9) 2323 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr9-315 chr9 125161360 125161592 + 25.8 0.000 intron (NM_002721, intron 2 of 6) AluJr|SINE|Alu -17948 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr11-207 chr11 111793765 111793997 + 25.8 0.000 intron (NM_001352420, intron 14 of 15) intron (NM_001352420, intron 14 of 15) -27492 NM_181699 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr11-639 chr11 101738527 101738759 + 25.8 0.000 Intergenic Intergenic -154636 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr11-345 chr11 44246683 44246915 + 25.8 0.000 3' UTR (NM_001178083, exon 15 of 15) 3' UTR (NM_001178083, exon 15 of 15) 63340 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr17-334 chr17 75774900 75775132 + 25.8 0.000 Intergenic Intergenic 4763 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding chr12-162 chr12 121765600 121765832 + 25.8 0.000 intron (NM_001080825, intron 6 of 11) intron (NM_001080825, intron 6 of 11) 27972 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr4-85 chr4 147481082 147481314 + 25.8 0.000 non-coding (NR_148964, exon 1 of 6) non-coding (NR_148964, exon 1 of 6) 101 NR_045958 1909 Hs.183713 NM_001957 ENSG00000151617 EDNRA ET-A|ETA|ETA-R|ETAR|ETRA|MFDA|hET-AR endothelin receptor type A protein-coding chr2-221 chr2 57720820 57721052 + 25.8 0.000 Intergenic Intergenic -186715 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr18-182 chr18 6140920 6141152 + 25.8 0.000 intron (NM_001365769, intron 13 of 16) L2c|LINE|L2 -115708 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA chr22-298 chr22 39820224 39820456 + 25.8 0.000 intron (NM_152512, intron 5 of 6) intron (NM_152512, intron 5 of 6) 73420 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding chr1-649 chr1 72780286 72780518 + 25.8 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -497863 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr5-723 chr5 154882797 154883029 + 25.8 0.000 Intergenic HERVIP10B3-int|LTR|ERV1 24286 NM_001301086 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr10-411 chr10 454518 454750 + 25.8 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -173930 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr14-130 chr14 63896374 63896606 + 25.8 0.000 intron (NM_015180, intron 1 of 114) L4_A_Mam|LINE|RTE-X 43486 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr12-78 chr12 104049973 104050205 + 25.8 0.000 5' UTR (NM_001316967, exon 2 of 11) 5' UTR (NM_001316967, exon 2 of 11) 14088 NM_001316967 83468 Hs.631650 NM_031302 ENSG00000120820 GLT8D2 - glycosyltransferase 8 domain containing 2 protein-coding chr1-996 chr1 169031606 169031838 + 25.8 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 55283 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr2-695 chr2 178757555 178757787 + 25.8 0.000 exon (NM_133432, exon 44 of 192) exon (NM_133432, exon 44 of 192) -19255 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr2-422 chr2 7192015 7192247 + 25.8 0.000 Intergenic Intergenic -114251 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr9-317 chr9 127154966 127155198 + 25.8 0.000 intron (NM_001190729, intron 8 of 17) intron (NM_001190729, intron 8 of 17) -32447 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr3-731 chr3 32086460 32086692 + 25.8 0.000 Intergenic L1ME4b|LINE|L1 -19935 NM_015141 23171 Hs.82432 NM_015141 ENSG00000152642 GPD1L GPD1-L glycerol-3-phosphate dehydrogenase 1 like protein-coding chr6-245 chr6 142631836 142632068 + 25.6 0.000 intron (NR_027311, intron 1 of 2) intron (NR_027311, intron 1 of 2) 5884 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr14-422 chr14 71551269 71551501 + 25.6 0.000 intron (NM_001354289, intron 5 of 23) intron (NM_001354289, intron 5 of 23) -34913 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr7-333 chr7 129054941 129055173 + 25.6 0.000 promoter-TSS (NR_002187) promoter-TSS (NR_002187) 116 NM_001191028 23534 Hs.193613 NM_012470 ENSG00000064419 TNPO3 IPO12|LGMD1F|LGMDD2|MTR10A|TRN-SR|TRN-SR2|TRNSR transportin 3 protein-coding chrX-13 chrX 108091505 108091737 + 25.6 0.000 promoter-TSS (NM_001321289) promoter-TSS (NM_001321289) 23 NM_170750 5716 Hs.522752 NM_002814 ENSG00000101843 PSMD10 dJ889N15.2|p28|p28(GANK) proteasome 26S subunit, non-ATPase 10 protein-coding chr12-211 chr12 41205315 41205547 + 25.6 0.000 intron (NM_001164595, intron 3 of 9) L2c|LINE|L2 17111 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr17-296 chr17 5516150 5516382 + 25.6 0.000 intron (NM_014922, intron 14 of 15) L3|LINE|CR1 -15260 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr3-334 chr3 186790662 186790894 + 25.6 0.000 TTS (NM_001967) TTS (NM_001967) 3165 NR_002588 619568 Hs.743897 NR_002588 ENSG00000263776 SNORA4 ACA4 small nucleolar RNA, H/ACA box 4 snoRNA chr10-359 chr10 126908795 126909027 + 25.6 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 3502 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr19-219 chr19 41310456 41310688 + 25.6 0.000 promoter-TSS (NM_001346100) promoter-TSS (NM_001346100) 95 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr9-216 chr9 91979074 91979306 + 25.6 0.000 Intergenic Intergenic -28962 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr4-187 chr4 112552872 112553104 + 25.6 0.000 intron (NM_018392, intron 22 of 27) intron (NM_018392, intron 22 of 27) -36808 NM_024019 63973 Hs.744415 NM_024019 ENSG00000178403 NEUROG2 Atoh4|Math4A|NGN2|bHLHa8|ngn-2 neurogenin 2 protein-coding chr6-8 chr6 36688149 36688381 + 25.6 0.000 TTS (NM_078467) TTS (NM_078467) 9551 NM_000389 1026 Hs.370771 NM_000389 ENSG00000124762 CDKN1A CAP20|CDKN1|CIP1|MDA-6|P21|SDI1|WAF1|p21CIP1 cyclin dependent kinase inhibitor 1A protein-coding chr5-343 chr5 131165286 131165518 + 25.6 0.000 promoter-TSS (NR_134495) promoter-TSS (NR_134495) -54 NR_134494 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr9-133 chr9 20981351 20981583 + 25.6 0.000 exon (NM_017794, exon 40 of 46) exon (NM_017794, exon 40 of 46) 50173 NM_001010915 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr10-286 chr10 78362571 78362803 + 25.6 0.000 Intergenic LTR78B|LTR|ERV1 95345 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr6-405 chr6 157714161 157714393 + 25.6 0.000 Intergenic Intergenic -108969 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr7-231 chr7 29606216 29606448 + 25.6 0.000 Intergenic Intergenic 40799 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr17-242 chr17 39573655 39573887 + 25.4 0.000 Intergenic CpG 34149 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr13-17 chr13 93228040 93228272 + 25.4 0.000 intron (NM_005708, intron 1 of 8) CpG 1349 NM_005708 10082 Hs.444329 NM_005708 ENSG00000183098 GPC6 OMIMD1 glypican 6 protein-coding chr19-449 chr19 45799127 45799359 + 25.4 0.000 intron (NM_030785, intron 5 of 5) intron (NM_030785, intron 5 of 5) -6398 NM_004943 1762 Hs.515474 NM_004943 ENSG00000185800 DMWD D19S593E|DMR-N9|DMRN9|gene59 DM1 locus, WD repeat containing protein-coding chr17-427 chr17 66523644 66523876 + 25.4 0.000 intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -106906 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr7-507 chr7 91083384 91083616 + 25.4 0.000 intron (NM_012395, intron 11 of 13) intron (NM_012395, intron 11 of 13) -180933 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr10-599 chr10 5367234 5367466 + 25.4 0.000 intron (NM_053049, intron 1 of 1) intron (NM_053049, intron 1 of 1) 2384 NM_053049 114131 Hs.511775 NM_053049 ENSG00000178473 UCN3 SCP|SPC|UCNIII urocortin 3 protein-coding chr6-135 chr6 105798226 105798458 + 25.4 0.000 Intergenic Intergenic -287994 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr4-173 chr4 3106717 3106949 + 25.4 0.000 intron (NM_002111, intron 5 of 66) intron (NM_002111, intron 5 of 66) 32152 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr12-199 chr12 3104945 3105177 + 25.4 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 27682 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr14-279 chr14 54591201 54591433 + 25.4 0.000 intron (NM_015589, intron 1 of 11) MER20B|DNA|hAT-Charlie 23705 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr1-281 chr1 149939194 149939426 + 25.4 0.000 3' UTR (NM_020205, exon 12 of 12) 3' UTR (NM_020205, exon 12 of 12) -2431 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr7-327 chr7 95335131 95335363 + 25.4 0.000 Intergenic Intergenic -10715 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr2-576 chr2 7008468 7008700 + 25.4 0.000 intron (NM_001349184, intron 3 of 8) intron (NM_001349184, intron 3 of 8) 69296 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr8-195 chr8 13366800 13367032 + 25.4 0.000 intron (NM_024767, intron 4 of 4) intron (NM_024767, intron 4 of 4) -90132 NM_001348083 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr15-125 chr15 63073454 63073686 + 25.4 0.000 Intergenic Intergenic -24183 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr15-273 chr15 64232382 64232614 + 25.4 0.000 intron (NM_001329607, intron 4 of 11) intron (NM_001329607, intron 4 of 11) -69343 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding chr12-526 chr12 68495808 68496040 + 25.4 0.000 Intergenic MER135|DNA|DNA -44440 NR_120458 100507195 Hs.450772 NR_120458 ENSG00000251301 LINC02384 - long intergenic non-protein coding RNA 2384 ncRNA chr6-200 chr6 25962647 25962879 + 25.4 0.000 promoter-TSS (NM_006355) promoter-TSS (NM_006355) -39 NM_006355 10475 Hs.584851 NM_006355 ENSG00000112343 TRIM38 RNF15|RORET tripartite motif containing 38 protein-coding chr11-736 chr11 119906840 119907072 + 25.4 0.000 Intergenic L2c|LINE|L2 177373 NR_120587 102724301 Hs.637640 NR_120587 ENSG00000254854 LOC102724301 - uncharacterized LOC102724301 ncRNA chr9-321 chr9 128550827 128551059 + 25.4 0.000 intron (NR_031672, intron 2 of 2).4 intron (NR_031672, intron 2 of 2).4 -1644 NM_001195532 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr17-414 chr17 57936195 57936427 + 25.4 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 19101 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr1-208 chr1 25338313 25338545 + 25.4 0.000 promoter-TSS (NM_001321772) promoter-TSS (NM_001321772) 95 NM_014313 23585 Hs.705699 NM_014313 ENSG00000183726 TMEM50A IFNRC|SMP1 transmembrane protein 50A protein-coding chr14-353 chr14 67622803 67623035 + 25.4 0.000 intron (NM_001172, intron 2 of 7) intron (NM_001172, intron 2 of 7) 2999 NM_001172 384 Hs.226007 NM_001172 ENSG00000081181 ARG2 - arginase 2 protein-coding chr2-730 chr2 229455169 229455401 + 25.4 0.000 intron (NM_139072, intron 7 of 12) MIRc|SINE|MIR -183998 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding chr3-305 chr3 194365046 194365278 + 25.4 0.000 intron (NM_001135057, intron 1 of 2) intron (NM_001135057, intron 1 of 2) 4581 NM_130830 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr7-385 chr7 100885309 100885541 + 25.4 0.000 intron (NM_015908, intron 10 of 19) intron (NM_015908, intron 10 of 19) 4290 NM_001015072 402682 Hs.534845 NM_001015072 ENSG00000176125 UFSP1 UFSP UFM1 specific peptidase 1 (inactive) protein-coding chr9-280 chr9 34222527 34222759 + 25.4 0.000 intron (NM_001171202, intron 2 of 5) AluJr|SINE|Alu 43600 NM_001171203 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding KI270723.1-1 KI270723.1 35150 35382 + 25.4 0.000 NA NA NA NA chr2-216 chr2 234958524 234958756 + 25.4 0.000 intron (NM_014521, intron 1 of 5) intron (NM_014521, intron 1 of 5) 6623 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr11-293 chr11 68315092 68315324 + 25.4 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 2617 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr4-393 chr4 158314818 158315050 + 25.4 0.000 Intergenic LTR104_Mam|LTR|Gypsy 104448 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr14-214 chr14 54441282 54441514 + 25.2 0.000 promoter-TSS (NM_005776) promoter-TSS (NM_005776) -24 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr4-68 chr4 55395684 55395916 + 25.2 0.000 promoter-TSS (NM_018475) promoter-TSS (NM_018475) -157 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr9-217 chr9 92293607 92293839 + 25.2 0.000 promoter-TSS (NM_002161) promoter-TSS (NM_002161) 33 NM_013417 3376 Hs.445403 NM_002161 ENSG00000196305 IARS GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 isoleucyl-tRNA synthetase protein-coding chr11-653 chr11 128299435 128299667 + 25.2 0.000 Intergenic Intergenic 90785 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr8-208 chr8 47659921 47660153 + 25.2 0.000 intron (NM_001352960, intron 1 of 12) intron (NM_001352960, intron 1 of 12) 373 NM_001352960 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr22-77 chr22 45671765 45671997 + 25.2 0.000 promoter-TSS (NM_001167621) promoter-TSS (NM_001167621) 47 NM_013236 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr22-37 chr22 20917145 20917377 + 25.2 0.000 promoter-TSS (NM_005207) promoter-TSS (NM_005207) -146 NM_005207 1399 Hs.5613 NM_005207 ENSG00000099942 CRKL - CRK like proto-oncogene, adaptor protein protein-coding chr3-274 chr3 45986342 45986574 + 25.2 0.000 intron (NM_024513, intron 1 of 17) intron (NM_024513, intron 1 of 17) 9366 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr11-214 chr11 10309438 10309670 + 25.2 0.000 intron (NR_103765, intron 1 of 3) intron (NR_103765, intron 1 of 3) 1241 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr17-161 chr17 44070605 44070837 + 25.2 0.000 promoter-TSS (NM_001319945) promoter-TSS (NM_001319945) -9 NM_138387 92579 Hs.294005 NM_138387 ENSG00000141349 G6PC3 SCN4|UGRP glucose-6-phosphatase catalytic subunit 3 protein-coding chr4-336 chr4 20026599 20026831 + 25.2 0.000 Intergenic Intergenic -225190 NM_001289135 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding chr4-199 chr4 163541146 163541378 + 25.2 0.000 intron (NM_017923, intron 3 of 3) L2c|LINE|L2 46572 NM_018352 55319 Hs.267446 NM_018352 ENSG00000198498 TMA16 C4orf43 translation machinery associated 16 homolog protein-coding chr10-148 chr10 72353762 72353994 + 25.2 0.000 intron (NR_157570, intron 1 of 8) intron (NR_157570, intron 1 of 8) 1041 NR_157570 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr16-254 chr16 85460916 85461148 + 25.2 0.000 Intergenic Intergenic -150377 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr4-97 chr4 26687790 26688022 + 25.2 0.000 intron (NM_001292054, intron 9 of 17) intron (NM_001292054, intron 9 of 17) 103822 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr19-460 chr19 3141881 3142113 + 25.2 0.000 non-coding (NR_110670, exon 4 of 4) non-coding (NR_110670, exon 4 of 4) 5964 NM_002068 2769 Hs.73797 NM_002068 ENSG00000060558 GNA15 GNA16 G protein subunit alpha 15 protein-coding chr1-758 chr1 52404505 52404737 + 25.0 0.000 promoter-TSS (NM_001190819) promoter-TSS (NM_001190819) 19 NM_032864 84950 Hs.5301 NM_032284 ENSG00000134748 PRPF38A PRP38A|Prp38 pre-mRNA processing factor 38A protein-coding chr1-178 chr1 203128151 203128383 + 25.0 0.000 intron (NM_001048230, intron 1 of 2) CpG 541 NM_001048230 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chrX-77 chrX 68146188 68146420 + 25.0 0.000 intron (NM_002547, intron 15 of 24) MER102a|DNA|hAT-Charlie 287191 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr22-310 chr22 45807384 45807616 + 25.0 0.000 intron (NM_013236, intron 10 of 11) intron (NM_013236, intron 10 of 11) 46976 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr4-151 chr4 32140770 32141002 + 25.0 0.000 intron (NR_125936, intron 1 of 2) intron (NR_125936, intron 1 of 2) -118464 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA chr1-503 chr1 175023266 175023498 + 25.0 0.000 promoter-TSS (NM_022100) promoter-TSS (NM_022100) 43 NM_022100 63931 Hs.654858 NM_022100 ENSG00000120333 MRPS14 COXPD38|DJ262D12.2|HSMRPS14|MRP-S14|S14mt mitochondrial ribosomal protein S14 protein-coding chr1-772 chr1 97758925 97759157 + 25.0 0.000 intron (NM_000110, intron 3 of 22) intron (NM_000110, intron 3 of 22) -37880 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr3-432 chr3 45818274 45818506 + 25.0 0.000 Intergenic Intergenic -21854 NM_020208 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr20-54 chr20 8019806 8020038 + 25.0 0.000 promoter-TSS (NM_021156) promoter-TSS (NM_021156) -161 NM_021156 56255 Hs.169358 NM_021156 ENSG00000125827 TMX4 DJ971N18.2|PDIA14|TXNDC13 thioredoxin related transmembrane protein 4 protein-coding chr3-532 chr3 116005482 116005714 + 25.0 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -100472 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr2-1088 chr2 197107616 197107848 + 25.0 0.000 intron (NM_153697, intron 9 of 9) intron (NM_153697, intron 9 of 9) -90259 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr17-335 chr17 77088656 77088888 + 25.0 0.000 promoter-TSS (NM_001204408) promoter-TSS (NM_001204408) 87 NM_001204408 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr2-83 chr2 231052865 231053097 + 25.0 0.000 Intergenic CpG -3883 NM_001191037 5707 Hs.3887 NM_002807 ENSG00000173692 PSMD1 P112|Rpn2|S1 proteasome 26S subunit, non-ATPase 1 protein-coding chr8-230 chr8 126263102 126263334 + 25.0 0.000 Intergenic AluSx|SINE|Alu -62277 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA chr2-218 chr2 47422652 47422884 + 25.0 0.000 intron (NM_000251, intron 6 of 15) intron (NM_000251, intron 6 of 15) 19701 NM_000251 4436 Hs.597656 NM_000251 ENSG00000095002 MSH2 COCA1|FCC1|HNPCC|HNPCC1|LCFS2|hMSH2 mutS homolog 2 protein-coding chr20-181 chr20 59835841 59836073 + 24.8 0.000 intron (NM_080672, intron 8 of 12) intron (NM_080672, intron 8 of 12) 97680 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr20-243 chr20 60879672 60879904 + 24.8 0.000 Intergenic Intergenic -199276 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr5-322 chr5 10590750 10590982 + 24.8 0.000 intron (NM_001164440, intron 1 of 3) L1MEg|LINE|L1 26796 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr11-467 chr11 88398410 88398642 + 24.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -60790 NM_148170 1075 Hs.128065 NM_001814 ENSG00000109861 CTSC CPPI|DPP-I|DPP1|DPPI|HMS|JP|JPD|PALS|PDON1|PLS cathepsin C protein-coding chr15-152 chr15 77118897 77119129 + 24.8 0.000 intron (NM_024776, intron 7 of 7) intron (NM_024776, intron 7 of 7) -47904 NM_001168412 10099 Hs.744863 NM_005724 ENSG00000140391 TSPAN3 TM4-A|TM4SF8|TSPAN-3 tetraspanin 3 protein-coding chr7-238 chr7 81299381 81299613 + 24.8 0.000 Intergenic Intergenic 262322 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr8-232 chr8 129582089 129582321 + 24.8 0.000 intron (NR_130917, intron 1 of 3) intron (NR_130917, intron 1 of 3) -7187 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA chr21-67 chr21 38567691 38567923 + 24.8 0.000 intron (NR_111949, intron 3 of 4) intron (NR_111949, intron 3 of 4) 17138 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr1-1024 chr1 206114364 206114596 + 24.8 0.000 intron (NM_000707, intron 1 of 1) intron (NM_000707, intron 1 of 1) 2908 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr5-172 chr5 151825538 151825770 + 24.8 0.000 intron (NM_001146040, intron 8 of 8) intron (NM_001146040, intron 8 of 8) -53478 NR_132345 100652758 Hs.587054 NM_001278082 LOC100652758 - uncharacterized LOC100652758 ncRNA chr3-815 chr3 104952728 104952960 + 24.8 0.000 Intergenic Intergenic -413869 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr9-360 chr9 94624699 94624931 + 24.8 0.000 intron (NM_000507, intron 1 of 6) intron (NM_000507, intron 1 of 6) 14703 NM_000507 2203 Hs.494496 NM_000507 ENSG00000165140 FBP1 FBP fructose-bisphosphatase 1 protein-coding chr2-350 chr2 158990386 158990618 + 24.8 0.000 intron (NM_001350065, intron 1 of 27) L2c|LINE|L2 21862 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr2-16 chr2 89833204 89833436 + 24.8 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -195413 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr14-210 chr14 43250724 43250956 + 24.8 0.000 Intergenic MamSINE1|SINE|tRNA-RTE 1256443 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr3-810 chr3 97931146 97931378 + 24.8 0.000 intron (NM_153605, intron 17 of 21) L2c|LINE|L2 41169 NM_153182 84864 Hs.570562 NM_032778 ENSG00000170854 RIOX2 JMJD10|MDIG|MINA|MINA53|NO52|ROX ribosomal oxygenase 2 protein-coding chr2-812 chr2 128842541 128842773 + 24.8 0.000 Intergenic AluSq2|SINE|Alu -21943 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr3-259 chr3 161568490 161568722 + 24.8 0.000 Intergenic Intergenic 71798 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr5-232 chr5 163478790 163479022 + 24.8 0.000 intron (NM_012484, intron 12 of 17) L2|LINE|L2 15152 NR_109892 101927813 Hs.726818 NR_109892 HMMR-AS1 - HMMR antisense RNA 1 ncRNA chr11-199 chr11 126304008 126304240 + 24.8 0.000 promoter-TSS (NM_001350236) promoter-TSS (NM_001350236) 64 NM_001350236 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr14-235 chr14 90677739 90677971 + 24.8 0.000 intron (NM_001320421, intron 8 of 20) intron (NM_001320421, intron 8 of 20) -19478 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr2-428 chr2 11584231 11584463 + 24.8 0.000 intron (NM_014668, intron 7 of 32) intron (NM_014668, intron 7 of 32) 41661 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr17-187 chr17 80147074 80147306 + 24.8 0.000 promoter-TSS (NM_014740) promoter-TSS (NM_014740) -62 NM_014740 9775 Hs.389649 NM_014740 ENSG00000141543 EIF4A3 DDX48|Fal1|MUK34|NMP265|NUK34|RCPS|eIF-4A-III|eIF4A-III|eIF4AIII eukaryotic translation initiation factor 4A3 protein-coding chr3-333 chr3 184316985 184317217 + 24.8 0.000 intron (NM_001194947, intron 4 of 32) intron (NM_001194947, intron 4 of 32) 1937 NM_182917 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr16-374 chr16 76294493 76294725 + 24.8 0.000 intron (NR_136213, intron 1 of 23) intron (NR_136213, intron 1 of 23) -15243 NM_138994 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding chr8-200 chr8 22651214 22651446 + 24.6 0.000 intron (NM_018688, intron 1 of 8) HAL1|LINE|L1 -9121 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr12-285 chr12 27076758 27076990 + 24.6 0.000 Intergenic Intergenic 5648 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding chr3-181 chr3 88991626 88991858 + 24.6 0.000 Intergenic Intergenic -115879 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr6-223 chr6 75418371 75418603 + 24.6 0.000 intron (NR_125859, intron 4 of 8) intron (NR_125859, intron 4 of 8) -9920 NR_039670 100616389 NR_039670 ENSG00000263533 MIR4463 - microRNA 4463 ncRNA chr7-412 chr7 6385522 6385754 + 24.6 0.000 intron (NM_006908, intron 1 of 5) intron (NM_006908, intron 1 of 5) 11111 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chr7-196 chr7 29564977 29565209 + 24.6 0.000 promoter-TSS (NM_001329997) promoter-TSS (NM_001329997) -440 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding chr5-486 chr5 6657543 6657775 + 24.6 0.000 intron (NM_001047, intron 3 of 4) intron (NM_001047, intron 3 of 4) 24219 NM_001047 6715 Hs.552 NM_001047 ENSG00000145545 SRD5A1 S5AR 1 steroid 5 alpha-reductase 1 protein-coding chr4-152 chr4 38819597 38819829 + 24.6 0.000 Intergenic Intergenic -14922 NM_003263 7096 Hs.621817 NM_003263 ENSG00000174125 TLR1 CD281|TIL|TIL. LPRS5|rsc786 toll like receptor 1 protein-coding chr11-816 chr11 42032202 42032434 + 24.6 0.000 intron (NR_135065, intron 7 of 9) L1MC1|LINE|L1 53140 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA chr1-1009 chr1 200814381 200814613 + 24.6 0.000 intron (NM_001297707, intron 3 of 17) AluSx1|SINE|Alu -58484 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr4-531 chr4 25719735 25719967 + 24.6 0.000 Intergenic Intergenic 63387 NM_001177999 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding chr5-407 chr5 73617634 73617866 + 24.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -8408 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr11-364 chr11 86955803 86956035 + 24.6 0.000 promoter-TSS (NM_012193) promoter-TSS (NM_012193) 298 NR_038905 100506368 Hs.559920 NR_038905 ENSG00000246523 FZD4-DT - FZD4 divergent transcript ncRNA chr17-574 chr17 62384843 62385075 + 24.6 0.000 intron (NM_001144933, intron 4 of 11) MER47A|DNA|TcMar-Tigger 4406 NM_173503 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding chr3-582 chr3 186277519 186277751 + 24.6 0.000 intron (NM_001346, intron 9 of 24) intron (NM_001346, intron 9 of 24) 84599 NM_001080745 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chrX-30 chrX 116379997 116380229 + 24.6 0.000 Intergenic Intergenic -56493 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr10-208 chr10 112732317 112732549 + 24.6 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -91063 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr7-814 chr7 119561790 119562022 + 24.6 0.000 Intergenic MamSINE1|SINE|tRNA-RTE 345469 NR_131960 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr17-17 chr17 26619517 26619749 + 24.4 0.000 Intergenic ALR/Alpha|Satellite|centr 469608 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr2-450 chr2 46850774 46851006 + 24.4 0.000 intron (NR_024452, intron 1 of 2) intron (NR_024452, intron 1 of 2) 23026 NR_024452 100134259 Hs.114449 NR_024452 ENSG00000239332 LINC01119 - long intergenic non-protein coding RNA 1119 ncRNA chr19-192 chr19 41323599 41323831 + 24.4 0.000 3' UTR (NM_052848, exon 5 of 5) 3' UTR (NM_052848, exon 5 of 5) 13238 NM_001346100 90324 Hs.437497 NM_052848 ENSG00000142039 CCDC97 - coiled-coil domain containing 97 protein-coding chr2-252 chr2 231104167 231104399 + 24.4 0.000 intron (NM_001191037, intron 16 of 23) intron (NM_001191037, intron 16 of 23) 20759 NM_000867 3357 Hs.421649 NM_000867 ENSG00000135914 HTR2B 5-HT(2B)|5-HT-2B|5-HT2B 5-hydroxytryptamine receptor 2B protein-coding chr1-261 chr1 8986137 8986369 + 24.4 0.000 Intergenic Intergenic 40092 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr22-121 chr22 36329865 36330097 + 24.4 0.000 intron (NM_002473, intron 3 of 40) (CACAAG)n|Simple_repeat|Simple_repeat -43074 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr2-166 chr2 24083961 24084193 + 24.4 0.000 intron (NM_147184, intron 2 of 5) intron (NM_147184, intron 2 of 5) 254 NM_001206802 9540 Hs.50649 NM_004881 ENSG00000115129 TP53I3 PIG3 tumor protein p53 inducible protein 3 protein-coding chr5-283 chr5 110785381 110785613 + 24.4 0.000 Intergenic Intergenic 46490 NM_001303249 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr11-371 chr11 118435995 118436227 + 24.4 0.000 promoter-TSS (NM_001197104) promoter-TSS (NM_001197104) -379 NM_001197104 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr15-23 chr15 42736524 42736756 + 24.4 0.000 exon (NM_138477, exon 2 of 28) exon (NM_138477, exon 2 of 28) 488 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding chr7-153 chr7 2354059 2354291 + 24.4 0.000 promoter-TSS (NM_001362792) promoter-TSS (NM_001362792) 89 NM_001362792 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr21-50 chr21 10722533 10722765 + 24.4 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 201135 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr17-487 chr17 68821963 68822195 + 24.4 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 133313 NM_001288986 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr13-186 chr13 77208022 77208254 + 24.4 0.000 intron (NM_015057, intron 23 of 82) MER4CL34|LTR|ERV1 118956 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr6-442 chr6 71149597 71149829 + 24.4 0.000 Intergenic AluSx1|SINE|Alu -139098 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr3-338 chr3 196979521 196979753 + 24.4 0.000 Intergenic Intergenic -10804 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr15-37 chr15 73926290 73926522 + 24.4 0.000 promoter-TSS (NM_005576) promoter-TSS (NM_005576) -56 NM_005576 4016 Hs.65436 NM_005576 ENSG00000129038 LOXL1 LOL|LOXL lysyl oxidase like 1 protein-coding chr10-353 chr10 119784700 119784932 + 24.4 0.000 intron (NM_014937, intron 3 of 19) L1MB8|LINE|L1 -34441 NM_001243194 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr1-511 chr1 206535407 206535639 + 24.4 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) -21641 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr5-637 chr5 79448495 79448727 + 24.4 0.000 intron (NM_001277078, intron 3 of 5) intron (NM_001277078, intron 3 of 5) 65225 NM_001277078 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr5-132 chr5 35129416 35129648 + 24.4 0.000 intron (NM_000949, intron 1 of 9) intron (NM_000949, intron 1 of 9) -11410 NM_001204318 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding GL000225.1-14 GL000225.1 66407 66639 + 24.4 0.000 NA NA NA NA chr8-143 chr8 120810598 120810830 + 24.4 0.000 intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 1332 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr4-225 chr4 145546032 145546264 + 24.4 0.000 intron (NM_005900, intron 4 of 6) intron (NM_005900, intron 4 of 6) -28954 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA KI270736.1-1 KI270736.1 181079 181311 + 24.4 0.000 NA NA NA NA GL000216.2-5 GL000216.2 14400 14632 + 24.4 0.000 NA NA NA NA chr6-348 chr6 53193004 53193236 + 24.2 0.000 Intergenic Intergenic -44279 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr17-524 chr17 9842285 9842517 + 24.2 0.000 intron (NM_004246, intron 3 of 12) intron (NM_004246, intron 3 of 12) 16477 NM_004246 9340 Hs.248202 NM_004246 ENSG00000065325 GLP2R - glucagon like peptide 2 receptor protein-coding chr12-332 chr12 129891243 129891475 + 24.2 0.000 intron (NM_133448, intron 1 of 8) intron (NM_133448, intron 1 of 8) 12666 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr1-916 chr1 46181799 46182031 + 24.2 0.000 intron (NM_005727, intron 3 of 8) intron (NM_005727, intron 3 of 8) -5427 NM_001303427 110117499 Hs.655387 NM_001303427 ENSG00000278139 LOC110117498-PIK3R3 - LOC110117498-PIK3R3 readthrough protein-coding chr3-280 chr3 101849391 101849623 + 24.2 0.000 promoter-TSS (NM_031419) promoter-TSS (NM_031419) -7 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr10-414 chr10 901522 901754 + 24.2 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 30067 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr9-576 chr9 15898213 15898445 + 24.2 0.000 intron (NM_001355547, intron 23 of 24) intron (NM_001355547, intron 23 of 24) 334351 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr8-439 chr8 19291403 19291635 + 24.2 0.000 Intergenic Intergenic -22051 NM_001174160 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr6-63 chr6 70413308 70413540 + 24.2 0.000 promoter-TSS (NM_001351607) promoter-TSS (NM_001351607) 20 NM_001331003 57579 Hs.211700 NM_020819 ENSG00000082269 FAM135A KIAA1411 family with sequence similarity 135 member A protein-coding chr5-414 chr5 80256460 80256692 + 24.2 0.000 promoter-TSS (NM_001174071) promoter-TSS (NM_001174071) -528 NM_178276 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr1-1034 chr1 215192444 215192676 + 24.2 0.000 intron (NM_001017424, intron 5 of 6) intron (NM_001017424, intron 5 of 6) 109823 NM_014217 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding chr15-167 chr15 43922134 43922366 + 24.2 0.000 intron (NM_001322951, intron 1 of 14) MIRb|SINE|MIR -44079 NR_003571 728758 Hs.658099 NR_003571 PIN4P1 - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 pseudo chr9-618 chr9 88806579 88806811 + 24.2 0.000 Intergenic Intergenic -60790 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr9-713 chr9 132703619 132703851 + 24.2 0.000 Intergenic MER101-int|LTR|ERV1 33271 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr5-308 chr5 158802873 158803105 + 24.2 0.000 intron (NM_001324107, intron 8 of 15) intron (NM_001324107, intron 8 of 15) 294967 NM_001364158 1879 Hs.573143 NM_024007 ENSG00000164330 EBF1 COE1|EBF|O/E-1|OLF1 EBF transcription factor 1 protein-coding chr4-190 chr4 122914395 122914627 + 24.2 0.000 intron (NM_198041, intron 2 of 4) intron (NM_198041, intron 2 of 4) 8086 NM_007083 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr2-727 chr2 225317994 225318226 + 24.2 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -81600 NM_001371273 chr13-297 chr13 51292041 51292273 + 24.2 0.000 Intergenic Intergenic -48875 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr18-231 chr18 58296377 58296609 + 24.2 0.000 intron (NM_001144965, intron 5 of 30) MLT1D|LTR|ERVL-MaLR 74922 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr12-232 chr12 121296288 121296520 + 24.2 0.000 intron (NM_172215, intron 1 of 15) CpG 305 NM_001270485 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr13-189 chr13 92734081 92734313 + 24.2 0.000 intron (NM_004466, intron 7 of 7) MIR3|SINE|MIR -12583 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA chr1-708 chr1 225138353 225138585 + 24.2 0.000 intron (NM_001367479, intron 27 of 85) L1PA11|LINE|L1 208794 NM_001349911 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr6-497 chr6 13969990 13970222 + 24.2 0.000 intron (NM_001165032, intron 2 of 3) L1MA4A|LINE|L1 44913 NM_001165033 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr15-91 chr15 75989227 75989459 + 24.2 0.000 intron (NM_138573, intron 3 of 5) L1MEc|LINE|L1 23081 NM_138573 145957 Hs.732438 NM_138573 ENSG00000169752 NRG4 HRG4 neuregulin 4 protein-coding chr7-380 chr7 90825773 90826005 + 24.2 0.000 intron (NM_012395, intron 4 of 13) intron (NM_012395, intron 4 of 13) 116073 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr13-194 chr13 98545101 98545333 + 24.2 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) -23092 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr17-513 chr17 6402364 6402596 + 24.2 0.000 Intergenic Intergenic 32641 NM_001033054 23746 Hs.279887 NM_014336 ENSG00000129221 AIPL1 AIPL2|LCA4 aryl hydrocarbon receptor interacting protein like 1 protein-coding chr4-426 chr4 39588070 39588302 + 24.2 0.000 intron (NR_047679, intron 3 of 4) MLT1G3|LTR|ERVL-MaLR 38935 NM_001317897 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr9-296 chr9 92600985 92601217 + 24.2 0.000 intron (NM_001286971, intron 1 of 3) intron (NM_001286971, intron 1 of 3) 844 NM_001286971 401541 Hs.713775 NM_001012267 ENSG00000188312 CENPP CENP-P centromere protein P protein-coding chr7-807 chr7 112510320 112510552 + 24.2 0.000 Intergenic Intergenic 29445 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr10-512 chr10 128970687 128970919 + 24.2 0.000 Intergenic Intergenic 57970 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr8-578 chr8 130290801 130291033 + 24.2 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 5616 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr10-179 chr10 25081347 25081579 + 24.2 0.000 Intergenic Intergenic -19184 NM_001270383 219670 Hs.534486 NM_145010 ENSG00000151023 ENKUR C10orf63|CFAP106 enkurin, TRPC channel interacting protein protein-coding chr18-59 chr18 3688861 3689093 + 24.2 0.000 intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 85240 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA chr3-792 chr3 68666829 68667061 + 24.2 0.000 Intergenic Intergenic 166308 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA chr2-649 chr2 105107918 105108150 + 24.2 0.000 Intergenic Intergenic -5090 NR_110227 101927492 Hs.469537 NR_110227 ENSG00000231851 UTAT33 - uncharacterized LOC101927492 ncRNA chr3-737 chr3 34427369 34427601 + 24.0 0.000 Intergenic L1PREC2|LINE|L1 628855 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr1-460 chr1 19505037 19505269 + 24.0 0.000 Intergenic Intergenic -19614 NM_004930 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr4-310 chr4 183407205 183407437 + 24.0 0.000 Intergenic Intergenic -37315 NM_001317343 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr10-325 chr10 68097248 68097480 + 24.0 0.000 Intergenic LFSINE_Vert|SINE|tRNA -8643 NR_045662 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr1-378 chr1 183543621 183543853 + 24.0 0.000 intron (NM_001174061, intron 13 of 21) intron (NM_001174061, intron 13 of 21) 46867 NM_001190794 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr1-679 chr1 176306320 176306552 + 24.0 0.000 Intergenic AluJb|SINE|Alu -99150 NM_022457 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding chr13-169 chr13 32315789 32316021 + 24.0 0.000 intron (NM_000059, intron 1 of 26) intron (NM_000059, intron 1 of 26) 425 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr2-1051 chr2 168238401 168238633 + 24.0 0.000 intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 9078 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr12-601 chr12 28114784 28115016 + 24.0 0.000 Intergenic L2a|LINE|L2 -75556 NM_001352084 55297 Hs.653125 NM_018318 ENSG00000123106 CCDC91 HSD8|p56 coiled-coil domain containing 91 protein-coding chr4-39 chr4 152536122 152536354 + 24.0 0.000 promoter-TSS (NM_001257069) promoter-TSS (NM_001257069) -26 NR_033797 54553 Hs.142307 NR_033797 ENSG00000268471 MIR4453HG DKFZP434I0714|LINC02486 MIR4453 host gene ncRNA chr16-267 chr16 11621760 11621992 + 24.0 0.000 Intergenic MER102c|DNA|hAT-Charlie -34410 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr3-384 chr3 129065620 129065852 + 24.0 0.000 Intergenic Intergenic 4969 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr8-222 chr8 102601093 102601325 + 24.0 0.000 Intergenic Intergenic 49620 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr1-271 chr1 31625553 31625785 + 24.0 0.000 intron (NM_001525, intron 8 of 8) intron (NM_001525, intron 8 of 8) 7969 NM_001525 3061 Hs.388226 NM_001525 ENSG00000121764 HCRTR1 OX1R hypocretin receptor 1 protein-coding chr10-278 chr10 34809183 34809415 + 24.0 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 5997 NM_001184794 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr19-215 chr19 10086127 10086359 + 24.0 0.000 promoter-TSS (NM_018381) promoter-TSS (NM_018381) -74 NM_001308277 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr2-180 chr2 47034492 47034724 + 24.0 0.000 intron (NM_001288951, intron 15 of 20) intron (NM_001288951, intron 15 of 20) -92753 NM_001171508 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr1-348 chr1 23791607 23791839 + 24.0 0.000 intron (NM_007260, intron 1 of 9) intron (NM_007260, intron 1 of 9) 578 NM_007260 11313 Hs.533479 NM_007260 ENSG00000011009 LYPLA2 APT-2|APT2|DJ886K2.4 lysophospholipase 2 protein-coding chr12-361 chr12 105199642 105199874 + 24.0 0.000 intron (NM_001251904, intron 9 of 20) intron (NM_001251904, intron 9 of 20) 33647 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr17-419 chr17 60143028 60143260 + 24.0 0.000 Intergenic Intergenic -6829 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr3-478 chr3 23650417 23650649 + 24.0 0.000 Intergenic HAL1|LINE|L1 -155422 NM_003341 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr1-1038 chr1 222931281 222931513 + 24.0 0.000 intron (NM_001369594, intron 1 of 7) intron (NM_001369594, intron 1 of 7) 2973 NM_001369594 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding chr2-596 chr2 33588297 33588529 + 24.0 0.000 exon (NM_015475, exon 4 of 8) exon (NM_015475, exon 4 of 8) 10886 NM_015475 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr1-479 chr1 53413273 53413505 + 24.0 0.000 Intergenic Intergenic 26631 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr3-385 chr3 134978019 134978251 + 24.0 0.000 intron (NM_004441, intron 3 of 15) intron (NM_004441, intron 3 of 15) 182875 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr15-65 chr15 63108082 63108314 + 24.0 0.000 Intergenic Intergenic -13663 NM_001288585 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr8-218 chr8 94262200 94262432 + 24.0 0.000 promoter-TSS (NM_181702) promoter-TSS (NM_181702) 3 NM_181702 2669 Hs.654463 NM_005261 ENSG00000164949 GEM KIR GTP binding protein overexpressed in skeletal muscle protein-coding chr9-160 chr9 101533848 101534080 + 24.0 0.000 intron (NM_019592, intron 1 of 19) intron (NM_019592, intron 1 of 19) 111 NM_019592 56254 Hs.729085 NM_019592 ENSG00000155827 RNF20 BRE1|BRE1A|hBRE1 ring finger protein 20 protein-coding chr12-308 chr12 75553755 75553987 + 24.0 0.000 Intergenic Intergenic -42262 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr3-137 chr3 52706173 52706405 + 23.8 0.000 promoter-TSS (NM_001278280) promoter-TSS (NM_001278280) 183 NM_014041 28972 Hs.11125 NM_014041 ENSG00000114902 SPCS1 HSPC033|SPC1|SPC12|YJR010C-A signal peptidase complex subunit 1 protein-coding chr2-380 chr2 36371218 36371450 + 23.8 0.000 intron (NM_016441, intron 1 of 16) L2c|LINE|L2 15556 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr16-341 chr16 88835541 88835773 + 23.8 0.000 intron (NM_001323544, intron 8 of 14) intron (NM_001323544, intron 8 of 14) -20563 NR_134671 51693 Hs.461722 NM_016209 ENSG00000167515 TRAPPC2L HSPC176|PERRB trafficking protein particle complex 2 like protein-coding chr8-54 chr8 80926173 80926405 + 23.8 0.000 Intergenic Intergenic -51508 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr10-168 chr10 24975034 24975266 + 23.8 0.000 Intergenic Intergenic -22544 NM_020200 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding chr8-368 chr8 143984361 143984593 + 23.8 0.000 intron (NM_032789, intron 5 of 10) intron (NM_032789, intron 5 of 10) 1983 NM_001317895 84875 Hs.348609 NM_032789 ENSG00000178685 PARP10 ARTD10 poly(ADP-ribose) polymerase family member 10 protein-coding chr2-1092 chr2 198961548 198961780 + 23.8 0.000 Intergenic Intergenic 496275 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr4-377 chr4 130395915 130396147 + 23.8 0.000 Intergenic Intergenic 19670 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr1-1565 chr1 209338797 209339029 + 23.8 0.000 Intergenic Intergenic 13457 NR_135085 105372897 Hs.116154 NR_135085 ENSG00000227940 LINC01696 - long intergenic non-protein coding RNA 1696 ncRNA chr3-445 chr3 119677127 119677359 + 23.8 0.000 exon (NM_005694, exon 1 of 3) exon (NM_005694, exon 1 of 3) 153 NM_005694 10063 Hs.534383 NM_005694 ENSG00000138495 COX17 - cytochrome c oxidase copper chaperone COX17 protein-coding chr15-305 chr15 101250571 101250803 + 23.8 0.000 intron (NM_014918, intron 1 of 2) intron (NM_014918, intron 1 of 2) 1361 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr4-172 chr4 2796626 2796858 + 23.8 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 3657 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr5-578 chr5 17316992 17317224 + 23.8 0.000 Intergenic Intergenic 70202 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr3-908 chr3 184773389 184773621 + 23.8 0.000 promoter-TSS (NR_110043) promoter-TSS (NR_110043) -350 NR_110043 101928992 Hs.507129 NR_110043 ENSG00000229433 LINC02069 - long intergenic non-protein coding RNA 2069 ncRNA chr14-393 chr14 51852644 51852876 + 23.8 0.000 Intergenic Intergenic -7852 NM_053064 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr16-567 chr16 2957792 2958024 + 23.8 0.000 Intergenic AluSx1|SINE|Alu -6367 NM_001253726 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr8-456 chr8 26265522 26265754 + 23.8 0.000 Intergenic Intergenic -25870 NM_002717 5520 Hs.146339 NM_002717 ENSG00000221914 PPP2R2A B55A|B55ALPHA|PR52A|PR55A|PR55alpha protein phosphatase 2 regulatory subunit Balpha protein-coding chr22-308 chr22 43991862 43992094 + 23.8 0.000 intron (NM_015380, intron 14 of 14) MLT1A|LTR|ERVL-MaLR -7233 NM_001003828 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr2-344 chr2 130372601 130372833 + 23.8 0.000 intron (NM_014369, intron 13 of 14) CpG-16578 16661 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr11-983 chr11 126396879 126397111 + 23.8 0.000 intron (NM_001348396, intron 2 of 11) MER20|DNA|hAT-Charlie -6421 NM_001254758 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr5-599 chr5 42873478 42873710 + 23.8 0.000 Intergenic Intergenic -61518 NM_001093726 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding chr3-132 chr3 45133936 45134168 + 23.8 0.000 intron (NM_178181, intron 1 of 3) intron (NM_178181, intron 1 of 3) 12326 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr15-458 chr15 87973808 87974040 + 23.8 0.000 intron (NM_001320135, intron 12 of 15) intron (NM_001320135, intron 12 of 15) -27656 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr14-202 chr14 20999011 20999243 + 23.8 0.000 promoter-TSS (NM_001256588) promoter-TSS (NM_001256588) 36 NR_110139 101929718 Hs.706252 NR_110139 ENSG00000258471 LOC101929718 - uncharacterized LOC101929718 ncRNA chr12-344 chr12 30111135 30111367 + 23.8 0.000 Intergenic Intergenic -326492 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chrX-124 chrX 65986289 65986521 + 23.8 0.000 Intergenic Intergenic -32465 NR_029637 407008 NR_029637 ENSG00000284567 MIR223 MIRN223|miRNA223|mir-223 microRNA 223 ncRNA chr16-620 chr16 56729696 56729928 + 23.8 0.000 promoter-TSS (NM_014669) promoter-TSS (NM_014669) -317 NM_014669 9688 Hs.276878 NM_014669 ENSG00000102900 NUP93 NIC96 nucleoporin 93 protein-coding chr8-513 chr8 78440587 78440819 + 23.8 0.000 Intergenic Intergenic -75637 NM_181839 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr17-39 chr17 21972986 21973218 + 23.8 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -229893 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr11-901 chr11 73521367 73521599 + 23.8 0.000 intron (NM_001286051, intron 1 of 5) A-rich|Low_complexity|Low_complexity 76629 NM_001286051 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr5-59 chr5 134004912 134005144 + 23.8 0.000 promoter-TSS (NR_036624) promoter-TSS (NR_036624) -53 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr17-423 chr17 64497676 64497908 + 23.8 0.000 promoter-TSS (NM_007215) promoter-TSS (NM_007215) -738 NM_007215 11232 Hs.437009 NM_007215 ENSG00000256525 POLG2 HP55|MTPOLB|PEOA4|POLB|POLG-BETA|POLGB DNA polymerase gamma 2, accessory subunit protein-coding chr9-293 chr9 75712783 75713015 + 23.8 0.000 Intergenic Intergenic -177745 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr15-426 chr15 72042931 72043163 + 23.8 0.000 intron (NM_006901, intron 2 of 41) AluJo|SINE|Alu -71211 NM_001166340 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding chr7-846 chr7 137081680 137081912 + 23.8 0.000 intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 82545 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA chr3-782 chr3 62408809 62409041 + 23.8 0.000 intron (NM_003716, intron 28 of 29) intron (NM_003716, intron 28 of 29) -35375 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr6-164 chr6 110875855 110876087 + 23.6 0.000 intron (NM_001287216, intron 1 of 4) CpG 1187 NM_001287216 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr2-681 chr2 159755695 159755927 + 23.6 0.000 intron (NM_001282805, intron 8 of 11) intron (NM_001282805, intron 8 of 11) 21847 NM_001282807 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr10-193 chr10 73279072 73279304 + 23.6 0.000 intron (NM_001367801, intron 20 of 27) L1MA4A|LINE|L1 26447 NR_134458 414245 Hs.568860 NR_038373 ENSG00000227540 DNAJC9-AS1 C10orf103|bA537A6.3 DNAJC9 antisense RNA 1 ncRNA chr3-279 chr3 97764579 97764811 + 23.6 0.000 promoter-TSS (NR_136595) promoter-TSS (NR_136595) -63 NR_103511 84100 Hs.373801 NM_032146 ENSG00000113966 ARL6 BBS3|RP55 ADP ribosylation factor like GTPase 6 protein-coding chr13-173 chr13 41455407 41455639 + 23.6 0.000 Intergenic SATR1|Satellite|Satellite -2027 NM_014059 28984 Hs.507866 NM_014059 ENSG00000102760 RGCC C13orf15|RGC-32|RGC32|bA157L14.2 regulator of cell cycle protein-coding chr4-415 chr4 8242425 8242657 + 23.6 0.000 Intergenic Intergenic -27213 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr13-164 chr13 25021260 25021492 + 23.6 0.000 Intergenic Intergenic -52907 NR_026730 646405 Hs.620592 NM_001126062 TPTE2P1 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 pseudo chr6-421 chr6 14426348 14426580 + 23.6 0.000 Intergenic Intergenic -141010 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr2-447 chr2 46303713 46303945 + 23.6 0.000 intron (NM_001430, intron 1 of 15) intron (NM_001430, intron 1 of 15) 6422 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr4-217 chr4 81958752 81958984 + 23.6 0.000 Intergenic LTR86A2|LTR|ERVL 415123 NM_031370 3184 Hs.480073 NM_002138 ENSG00000138668 HNRNPD AUF1|AUF1A|HNRPD|P37|hnRNPD0 heterogeneous nuclear ribonucleoprotein D protein-coding chr6-90 chr6 126748195 126748427 + 23.6 0.000 Intergenic Intergenic 263680 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr19-759 chr19 4243604 4243836 + 23.6 0.000 Intergenic LTR54|LTR|ERV1 -3360 NM_018074 55702 Hs.21811 NM_018074 ENSG00000105248 YJU2 CCDC94 YJU2 splicing factor homolog protein-coding chr11-640 chr11 105244407 105244639 + 23.6 0.000 Intergenic Intergenic -104754 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr3-281 chr3 109685363 109685595 + 23.6 0.000 Intergenic LTR25|LTR|ERV1 82651 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chr12-112 chr12 8026553 8026785 + 23.6 0.000 Intergenic Intergenic -6047 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr11-200 chr11 126318437 126318669 + 23.6 0.000 intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 14493 NM_001350236 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr6-554 chr6 79810453 79810685 + 23.6 0.000 intron (NR_131786, intron 2 of 4) intron (NR_131786, intron 2 of 4) 1677 NR_131786 89758 Hs.288213 NM_001243308 LINC01621 C6orf7 long intergenic non-protein coding RNA 1621 ncRNA chr6-268 chr6 35354761 35354993 + 23.6 0.000 intron (NM_001171819, intron 2 of 6) intron (NM_001171819, intron 2 of 6) 12319 NM_177435 5467 Hs.696032 NM_006238 ENSG00000112033 PPARD FAAR|NR1C2|NUC1|NUCI|NUCII|PPARB peroxisome proliferator activated receptor delta protein-coding chr15-239 chr15 38085800 38086032 + 23.6 0.000 Intergenic Intergenic -12926 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr2-426 chr2 10344935 10345167 + 23.6 0.000 intron (NM_001258357, intron 1 of 4) intron (NM_001258357, intron 1 of 4) 14888 NM_001258357 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr9-446 chr9 104093744 104093976 + 23.6 0.000 promoter-TSS (NM_001042551) promoter-TSS (NM_001042551) -400 NM_001265602 10592 Hs.119023 NM_006444 ENSG00000136824 SMC2 CAP-E|CAPE|SMC-2|SMC2L1 structural maintenance of chromosomes 2 protein-coding chr16-654 chr16 71796665 71796897 + 23.6 0.000 intron (NM_001128, intron 1 of 22) intron (NM_001128, intron 1 of 22) 12053 NM_001128 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding chr2-1054 chr2 171410744 171410976 + 23.6 0.000 intron (NM_024770, intron 1 of 9) intron (NM_024770, intron 1 of 9) 23130 NM_001321156 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr9-86 chr9 128705912 128706144 + 23.6 0.000 intron (NM_013355, intron 3 of 21) intron (NM_013355, intron 3 of 21) 3525 NM_013355 29941 Hs.300485 NM_013355 ENSG00000160447 PKN3 UTDP4-1 protein kinase N3 protein-coding chr5-226 chr5 150317068 150317300 + 23.4 0.000 Intergenic Intergenic -14279 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr17-313 chr17 50027715 50027947 + 23.4 0.000 Intergenic L2a|LINE|L2 27908 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA chr17-432 chr17 70668274 70668506 + 23.4 0.000 Intergenic LTR18B|LTR|ERVL 498855 NM_000891 3759 Hs.1547 NM_000891 ENSG00000123700 KCNJ2 ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3 potassium voltage-gated channel subfamily J member 2 protein-coding chr4-500 chr4 4260282 4260514 + 23.4 0.000 Intergenic L1M5|LINE|L1 -12156 NM_032927 85013 Hs.12845 NM_032927 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding chr1-228 chr1 192808813 192809045 + 23.4 0.000 promoter-TSS (NM_002923) promoter-TSS (NM_002923) -110 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding chr5-290 chr5 132090193 132090425 + 23.4 0.000 Intergenic HERV16-int|LTR|ERVL 16520 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr14-206 chr14 34982978 34983210 + 23.4 0.000 promoter-TSS (NR_151701) promoter-TSS (NR_151701) 102 NM_003136 6729 Hs.167535 NM_003136 ENSG00000100883 SRP54 - signal recognition particle 54 protein-coding chr14-228 chr14 75867949 75868181 + 23.4 0.000 intron (NM_015072, intron 29 of 31) intron (NM_015072, intron 29 of 31) 113930 NM_001329938 7043 Hs.592317 NM_003239 ENSG00000119699 TGFB3 ARVD|ARVD1|LDS5|RNHF|TGF-beta3 transforming growth factor beta 3 protein-coding chr8-80 chr8 23163403 23163635 + 23.4 0.000 intron (NM_003840, intron 1 of 8) intron (NM_003840, intron 1 of 8) 508 NM_003840 8793 Hs.213467 NM_003840 ENSG00000173530 TNFRSF10D CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD TNF receptor superfamily member 10d protein-coding chr1-459 chr1 19478020 19478252 + 23.4 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 6159 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr4-375 chr4 129462823 129463055 + 23.4 0.000 Intergenic LTR16E2|LTR|ERVL 308539 NR_110753 101927282 Hs.407480 NR_110753 ENSG00000246876 LINC02466 - long intergenic non-protein coding RNA 2466 ncRNA chr7-760 chr7 77426585 77426817 + 23.4 0.000 Intergenic Intergenic -10352 NR_146937 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr6-450 chr6 103915441 103915673 + 23.4 0.000 Intergenic Intergenic 943989 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr5-250 chr5 140664799 140665031 + 23.4 0.000 exon (NM_017706, exon 1 of 7) exon (NM_017706, exon 1 of 7) 116 NM_017706 54853 Hs.286261 NM_017706 ENSG00000120314 WDR55 - WD repeat domain 55 protein-coding chr9-114 chr9 78235837 78236069 + 23.4 0.000 promoter-TSS (NM_001098802) promoter-TSS (NM_001098802) -122 NM_001349838 84131 Hs.187621 NM_032171 ENSG00000148019 CEP78 C9orf81|CRDHL|IP63 centrosomal protein 78 protein-coding chr16-458 chr16 70476616 70476848 + 23.4 0.000 intron (NM_145059, intron 20 of 23) intron (NM_145059, intron 20 of 23) 22137 NM_145059 197258 Hs.7907 NM_145059 ENSG00000157353 FCSK 1110046B12Rik|CDGF2|FUK fucose kinase protein-coding chr11-781 chr11 10139796 10140028 + 23.4 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 154295 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr20-53 chr20 62847616 62847848 + 23.4 0.000 intron (NM_006602, intron 5 of 5) AluSx|SINE|Alu 3166 NM_080750 100132911 NM_080750 DPH3P1 C20orf143|DPH3B|ZCSL1 diphthamide biosynthesis 3 pseudogene 1 protein-coding chr20-107 chr20 52191281 52191513 + 23.4 0.000 intron (NM_199427, intron 1 of 8) CpG 382 NM_018197 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr7-377 chr7 79096504 79096736 + 23.4 0.000 intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) 87632 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr18-79 chr18 3451453 3451685 + 23.4 0.000 promoter-TSS (NM_170695) promoter-TSS (NM_170695) -24 NM_170695 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr21-112 chr21 34702423 34702655 + 23.4 0.000 intron (NM_053277, intron 1 of 5) intron (NM_053277, intron 1 of 5) 33545 NM_001317009 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding chr7-533 chr7 127776742 127776974 + 23.4 0.000 intron (NM_014390, intron 10 of 23) intron (NM_014390, intron 10 of 23) 124664 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr15-348 chr15 101578510 101578742 + 23.4 0.000 Intergenic Intergenic 35713 NR_147041 101927505 Hs.578394 NR_147041 LINC02348 - long intergenic non-protein coding RNA 2348 ncRNA chr15-141 chr15 39624812 39625044 + 23.4 0.000 intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 43849 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr12-416 chr12 48853144 48853376 + 23.4 0.000 Intergenic Intergenic -1097 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding chr19-751 chr19 2475213 2475445 + 23.4 0.000 promoter-TSS (NM_015675) promoter-TSS (NM_015675) -798 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr17-401 chr17 39668364 39668596 + 23.2 0.000 promoter-TSS (NM_002686) promoter-TSS (NM_002686) 27 NM_002686 5409 Hs.1892 NM_002686 ENSG00000141744 PNMT PENT|PNMTase phenylethanolamine N-methyltransferase protein-coding chr2-384 chr2 46749107 46749339 + 23.2 0.000 intron (NM_144949, intron 1 of 1) intron (NM_144949, intron 1 of 1) 49928 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr11-449 chr11 66834264 66834496 + 23.2 0.000 intron (NM_001302084, intron 12 of 14) intron (NM_001302084, intron 12 of 14) -9061 NM_005133 9986 Hs.654972 NM_005133 ENSG00000173653 RCE1 FACE2|RCE1A|RCE1B Ras converting CAAX endopeptidase 1 protein-coding chr1-293 chr1 203663485 203663717 + 23.2 0.000 intron (NM_001365784, intron 1 of 20) (CT)n|Simple_repeat|Simple_repeat 35664 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr14-139 chr14 95023921 95024153 + 23.2 0.000 Intergenic Intergenic 109466 NM_001195573 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr3-283 chr3 114092825 114093057 + 23.2 0.000 Intergenic Intergenic 36204 NM_001256835 79691 Hs.477162 NM_024638 ENSG00000151576 QTRT2 QTRTD1 queuine tRNA-ribosyltransferase accessory subunit 2 protein-coding chr22-363 chr22 20588646 20588878 + 23.2 0.000 Intergenic Intergenic 80715 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr9-610 chr9 69006440 69006672 + 23.2 0.000 intron (NM_003558, intron 15 of 15) L3|LINE|CR1 7567 NM_002732 5568 Hs.158029 NM_002732 ENSG00000165059 PRKACG BDPLT19|KAPG|PKACg protein kinase cAMP-activated catalytic subunit gamma protein-coding chr4-174 chr4 7210889 7211121 + 23.2 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 18467 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr2-181 chr2 47237426 47237658 + 23.2 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -60606 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr6-222 chr6 72748840 72749072 + 23.2 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 118461 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr5-257 chr5 157855412 157855644 + 23.2 0.000 intron (NM_001195556, intron 1 of 11) intron (NM_001195556, intron 1 of 11) 3617 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr17-420 chr17 62778931 62779163 + 23.2 0.000 intron (NM_001288780, intron 4 of 10) intron (NM_001288780, intron 4 of 10) 27593 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding chr12-611 chr12 42238411 42238643 + 23.2 0.000 promoter-TSS (NM_001190977) promoter-TSS (NM_001190977) -159 NM_005748 10138 Hs.649195 NM_005748 ENSG00000015153 YAF2 - YY1 associated factor 2 protein-coding chr20-186 chr20 2748061 2748293 + 23.2 0.000 intron (NM_001110514, intron 7 of 17) intron (NM_001110514, intron 7 of 17) 52450 NM_001184699 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr11-798 chr11 23817943 23818175 + 23.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR -398869 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr7-390 chr7 127900776 127901008 + 23.2 0.000 intron (NM_014390, intron 13 of 23) intron (NM_014390, intron 13 of 23) -96617 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-922 chr1 53590053 53590285 + 23.2 0.000 intron (NM_147193, intron 3 of 9) MIRb|SINE|MIR 130770 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr21-62 chr21 7947260 7947492 + 23.2 0.000 Intergenic (CATTC)n|Satellite|Satellite -117744 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr10-425 chr10 20276567 20276799 + 23.2 0.000 intron (NM_032812, intron 13 of 13) intron (NM_032812, intron 13 of 13) -275287 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr20-201 chr20 31905830 31906062 + 23.2 0.000 intron (NM_001367620, intron 4 of 11) AluSp|SINE|Alu 26129 NR_160276 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr17-336 chr17 77375186 77375418 + 23.2 0.000 promoter-TSS (NM_001113494) promoter-TSS (NM_001113494) -781 NM_001113494 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr14-268 chr14 24426977 24427209 + 23.2 0.000 3' UTR (NM_001039771, exon 3 of 3) 3' UTR (NM_001039771, exon 3 of 3) -2193 NM_001290256 23351 Hs.713590 NM_015299 ENSG00000100441 KHNYN KIAA0323 KH and NYN domain containing protein-coding chr8-15 chr8 71362129 71362361 + 23.2 0.000 promoter-TSS (NM_000503) promoter-TSS (NM_000503) -176 NM_001288575 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr17-355 chr17 21275666 21275898 + 23.2 0.000 Intergenic CpG -8929 NM_001316332 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr13-185 chr13 67706465 67706697 + 23.2 0.000 Intergenic L1PA10|LINE|L1 334194 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr6-131 chr6 18053642 18053874 + 23.2 0.000 Intergenic Intergenic -66123 NM_001105566 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr5-110 chr5 63970225 63970457 + 23.2 0.000 Intergenic AluJb|SINE|Alu -8049 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding chr1-1200 chr1 241093815 241094047 + 23.2 0.000 intron (NM_001350116, intron 3 of 16) intron (NM_001350116, intron 3 of 16) -38341 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr2-1059 chr2 173048997 173049229 + 23.2 0.000 intron (NM_001282901, intron 24 of 24) MIRb|SINE|MIR -26733 NM_133646 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr16-682 chr16 83012059 83012291 + 23.2 0.000 intron (NM_001220490, intron 2 of 12) intron (NM_001220490, intron 2 of 12) -21877 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr7-317 chr7 7136393 7136625 + 23.2 0.000 Intergenic MIR|SINE|MIR -39723 NR_034022 100131257 Hs.551110 NR_034022 LOC100131257 - zinc finger protein 655 pseudogene pseudo chr4-118 chr4 1360727 1360959 + 23.2 0.000 intron (NM_020894, intron 7 of 13) intron (NM_020894, intron 7 of 13) 13287 NM_001317935 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr16-158 chr16 30335259 30335491 + 23.2 0.000 promoter-TSS (NR_002453) promoter-TSS (NR_002453) -1 NR_002453 595101 Hs.654650 NR_002453 ENSG00000183604 SMG1P5 - SMG1 pseudogene 5 pseudo chr3-864 chr3 150319922 150320154 + 23.2 0.000 intron (NR_110187, intron 1 of 1) intron (NR_110187, intron 1 of 1) 3709 NR_110186 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr1-645 chr1 61139536 61139768 + 23.2 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 57091 NM_005595 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr15-165 chr15 40589866 40590098 + 23.0 0.000 Intergenic Intergenic -4267 NM_144508 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr10-460 chr10 74433278 74433510 + 23.0 0.000 intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 95930 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr10-239 chr10 13710067 13710299 + 23.0 0.000 intron (NM_001318336, intron 11 of 23) intron (NM_001318336, intron 11 of 23) -2616 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr10-183 chr10 35640467 35640699 + 23.0 0.000 TTS (NR_039831) TTS (NR_039831) 669 NR_039831 100616500 NR_039831 ENSG00000284265 MIR4683 - microRNA 4683 ncRNA chr5-392 chr5 54993301 54993533 + 23.0 0.000 Intergenic LTR90A|LTR|LTR -7824 NM_007036 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr14-227 chr14 75259057 75259289 + 23.0 0.000 Intergenic CpG -19655 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr5-595 chr5 37991388 37991620 + 23.0 0.000 Intergenic Intergenic -34193 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr17-547 chr17 32828790 32829022 + 23.0 0.000 intron (NM_015194, intron 1 of 21) MIR|SINE|MIR 48218 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding chr15-389 chr15 51051927 51052159 + 23.0 0.000 intron (NR_146310, intron 1 of 2) intron (NR_146310, intron 1 of 2) 14555 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chrX-243 chrX 62888735 62888967 + 23.0 0.000 Intergenic L1PA8|LINE|L1 462481 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr20-172 chr20 34982015 34982247 + 23.0 0.000 intron (NM_020884, intron 9 of 44) MIRb|SINE|MIR -8245 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr9-312 chr9 124214547 124214779 + 23.0 0.000 Intergenic LTR16E1|LTR|ERVL -42943 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr15-115 chr15 34367537 34367769 + 23.0 0.000 promoter-TSS (NM_153613) promoter-TSS (NM_153613) -457 NM_153613 254531 Hs.352614 NM_153613 ENSG00000176454 LPCAT4 AGPAT7|AYTL3|LPAAT-eta|LPEAT2 lysophosphatidylcholine acyltransferase 4 protein-coding chr1-1381 chr1 75247672 75247904 + 23.0 0.000 intron (NM_001320283, intron 5 of 21) L2a|LINE|L2 113400 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr20-364 chr20 44181385 44181617 + 23.0 0.000 intron (NM_175913, intron 1 of 1) MER112|DNA|hAT-Charlie 5687 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr11-810 chr11 36157177 36157409 + 23.0 0.000 intron (NM_001304263, intron 3 of 4) intron (NM_001304263, intron 3 of 4) -79392 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr1-550 chr1 76268439 76268671 + 23.0 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 193809 NM_001349107 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr4-180 chr4 75878301 75878533 + 23.0 0.000 intron (NM_006239, intron 10 of 16) intron (NM_006239, intron 10 of 16) 24035 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr16-433 chr16 46690101 46690333 + 23.0 0.000 intron (NR_037620, intron 1 of 6) intron (NR_037620, intron 1 of 6) 558 NM_014321 23594 Hs.49760 NM_014321 ENSG00000091651 ORC6 ORC6L origin recognition complex subunit 6 protein-coding chr18-211 chr18 37336696 37336928 + 23.0 0.000 intron (NM_001353724, intron 2 of 12) CpG 62352 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr14-190 chr14 42677310 42677542 + 23.0 0.000 Intergenic Intergenic 1070570 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr2-170 chr2 120915193 120915425 + 23.0 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 123028 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr10-132 chr10 69867032 69867264 + 23.0 0.000 intron (NM_001368898, intron 3 of 33) intron (NM_001368898, intron 3 of 33) 65242 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr6-426 chr6 34580624 34580856 + 23.0 0.000 Intergenic Intergenic -24407 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr4-307 chr4 156322669 156322901 + 23.0 0.000 Intergenic Intergenic -368919 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr4-188 chr4 119525201 119525433 + 23.0 0.000 intron (NM_033437, intron 12 of 20) L2c|LINE|L2 70534 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr1-1524 chr1 186912211 186912443 + 23.0 0.000 intron (NM_024420, intron 7 of 17) L1MC1|LINE|L1 83378 NM_001311193 5321 Hs.497200 NM_024420 ENSG00000116711 PLA2G4A GURDP|PLA2G4|cPLA2|cPLA2-alpha phospholipase A2 group IVA protein-coding chr1-675 chr1 168203203 168203435 + 23.0 0.000 Intergenic L1MCc|LINE|L1 -22685 NM_199344 375035 Hs.645435 NM_199344 ENSG00000213064 SFT2D2 UNQ512|dJ747L4.C1.2 SFT2 domain containing 2 protein-coding chr2-884 chr2 10967041 10967273 + 23.0 0.000 Intergenic Intergenic 55223 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr6-608 chr6 141739916 141740148 + 23.0 0.000 Intergenic L1MC3|LINE|L1 348767 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr5-111 chr5 75717495 75717727 + 23.0 0.000 promoter-TSS (NM_001099271) promoter-TSS (NM_001099271) -174 NM_001099271 134359 Hs.432726 NM_152408 ENSG00000152359 POC5 C5orf37 POC5 centriolar protein protein-coding chr13-217 chr13 35857441 35857673 + 23.0 0.000 intron (NM_001330071, intron 5 of 16) LTR43|LTR|ERV1 -1696 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr5-179 chr5 14406595 14406827 + 23.0 0.000 intron (NM_007118, intron 33 of 56) intron (NM_007118, intron 33 of 56) -57272 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr6-328 chr6 19851903 19852135 + 23.0 0.000 Intergenic Intergenic 14649 NM_001546 3400 Hs.519601 NM_001546 ENSG00000172201 ID4 IDB4|bHLHb27 inhibitor of DNA binding 4, HLH protein protein-coding chr1-506 chr1 197868952 197869184 + 23.0 0.000 Intergenic Intergenic -33562 NM_001024594 388722 Hs.61329 NM_001024594 ENSG00000203724 C1orf53 - chromosome 1 open reading frame 53 protein-coding chr1-1486 chr1 163724347 163724579 + 23.0 0.000 Intergenic Intergenic -301272 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr3-412 chr3 190345199 190345431 + 23.0 0.000 Intergenic Intergenic -22869 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr8-541 chr8 104257344 104257576 + 23.0 0.000 Intergenic Intergenic 34125 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr7-247 chr7 986146 986378 + 22.8 0.000 intron (NM_017781, intron 4 of 8) intron (NM_017781, intron 4 of 8) 3081 NM_017781 54905 Hs.272795 NM_017781 ENSG00000073067 CYP2W1 - cytochrome P450 family 2 subfamily W member 1 protein-coding chr2-783 chr2 76953519 76953751 + 22.8 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) -32330 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA chr14-148 chr14 67816544 67816776 + 22.8 0.000 promoter-TSS (NM_015346) promoter-TSS (NM_015346) -70 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr11-930 chr11 93411147 93411379 + 22.8 0.000 intron (NM_181645, intron 12 of 13) intron (NM_181645, intron 12 of 13) 80546 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr11-618 chr11 72142109 72142341 + 22.8 0.000 Intergenic Intergenic 6500 NM_001318045 2352 Hs.352 NM_000804 ENSG00000110203 FOLR3 FR-G|FR-gamma|FRgamma|gamma-hFR folate receptor gamma protein-coding chr5-85 chr5 61331000 61331232 + 22.8 0.000 Intergenic CpG -1142 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr11-421 chr11 12182680 12182912 + 22.8 0.000 intron (NR_144420, intron 3 of 27) intron (NR_144420, intron 3 of 27) 19113 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr2-1010 chr2 109108964 109109196 + 22.8 0.000 Intergenic Intergenic -20125 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr16-599 chr16 30610365 30610597 + 22.8 0.000 promoter-TSS (NR_104166) promoter-TSS (NR_104166) -48 NR_073482 115509 Hs.454685 NM_138447 ENSG00000156853 ZNF689 TIPUH1 zinc finger protein 689 protein-coding chr3-822 chr3 113913542 113913774 + 22.8 0.000 intron (NM_001172105, intron 4 of 12) intron (NM_001172105, intron 4 of 12) 16158 NM_001172105 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr3-370 chr3 73029412 73029644 + 22.8 0.000 intron (NM_001318025, intron 2 of 7) L2a|LINE|L2 -32131 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr10-558 chr10 77250907 77251139 + 22.8 0.000 intron (NM_001322838, intron 3 of 29) intron (NM_001322838, intron 3 of 29) 99738 NM_001322838 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr3-709 chr3 13280298 13280530 + 22.8 0.000 Intergenic Intergenic 139908 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr1-238 chr1 32989269 32989501 + 22.8 0.000 Intergenic L3b|LINE|CR1 -24576 NM_153341 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr3-890 chr3 163071809 163072041 + 22.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 231376 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr11-322 chr11 99020489 99020721 + 22.8 0.000 promoter-TSS (NM_014361) promoter-TSS (NM_014361) -344 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr15-393 chr15 54503774 54504006 + 22.8 0.000 intron (NM_001329919, intron 21 of 31) intron (NM_001329919, intron 21 of 31) 491242 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding chr13-29 chr13 101627432 101627664 + 22.8 0.000 intron (NM_001271754, intron 6 of 10) L1MC1|LINE|L1 137596 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr17-198 chr17 25389817 25390049 + 22.8 0.000 Intergenic ALR/Alpha|Satellite|centr 1699308 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr10-118 chr10 101694325 101694557 + 22.8 0.000 exon (NM_022039, exon 1 of 9) exon (NM_022039, exon 1 of 9) 729 NR_136613 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr10-546 chr10 62637558 62637790 + 22.8 0.000 intron (NM_199451, intron 5 of 7) intron (NM_199451, intron 5 of 7) 117226 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr20-179 chr20 45857034 45857266 + 22.8 0.000 promoter-TSS (NM_080752) promoter-TSS (NM_080752) 242 NM_005469 10005 Hs.444776 NM_005469 ENSG00000101473 ACOT8 HNAACTE|NAP1|PTE-1|PTE-2|PTE1|PTE2|hACTE-III|hTE acyl-CoA thioesterase 8 protein-coding chr7-191 chr7 4631678 4631910 + 22.8 0.000 Intergenic Intergenic -50501 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr12-287 chr12 42705998 42706230 + 22.8 0.000 intron (NR_135028, intron 2 of 3) intron (NR_135028, intron 2 of 3) 13898 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA chr6-159 chr6 81265196 81265428 + 22.8 0.000 Intergenic Intergenic 487369 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chrX-207 chrX 23878072 23878304 + 22.8 0.000 intron (NM_024122, intron 3 of 8) intron (NM_024122, intron 3 of 8) 29750 NR_026545 79135 Hs.495851 NM_024122 ENSG00000184831 APOO FAM121B|MIC26|MICOS26|Mic23|My025 apolipoprotein O protein-coding chr1-352 chr1 39213539 39213771 + 22.8 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 129488 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chrX-300 chrX 154738098 154738330 + 22.8 0.000 intron (NR_104114, intron 1 of 8) L3|LINE|CR1 12863 NM_080612 139716 Hs.496982 NM_080612 ENSG00000160219 GAB3 - GRB2 associated binding protein 3 protein-coding chr18-84 chr18 23503009 23503241 + 22.8 0.000 promoter-TSS (NM_013326) promoter-TSS (NM_013326) -345 NM_001276342 29919 Hs.464779 NM_013326 ENSG00000141452 RMC1 C18orf8|HsT2591|MIC1|Mic-1|WDR98 regulator of MON1-CCZ1 protein-coding chr12-757 chr12 129448105 129448337 + 22.8 0.000 intron (NM_133448, intron 3 of 8) L1PA13|LINE|L1 239620 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA chr17-224 chr17 51166113 51166345 + 22.8 0.000 promoter-TSS (NM_001198682) promoter-TSS (NM_001198682) -182 NM_001198682 4831 Hs.463456 NM_002512 ENSG00000243678 NME2 NDKB|NDPK-B|NDPKB|NM23-H2|NM23B|PUF NME/NM23 nucleoside diphosphate kinase 2 protein-coding chr21-118 chr21 45091976 45092208 + 22.8 0.000 intron (NM_001346688, intron 1 of 11) intron (NM_001346688, intron 1 of 11) 17041 NM_001346688 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr21-107 chr21 23940653 23940885 + 22.8 0.000 Intergenic ERVL-E-int|LTR|ERVL 380608 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr16-351 chr16 2811496 2811728 + 22.8 0.000 Intergenic L1M2a|LINE|L1 -5625 NR_073012 10942 Hs.72026 NM_006799 ENSG00000007038 PRSS21 ESP-1|ESP1|TEST1|TESTISIN serine protease 21 protein-coding chr17-295 chr17 4940442 4940674 + 22.8 0.000 promoter-TSS (NM_001165417) promoter-TSS (NM_001165417) 290 NM_001370307 26001 Hs.7158 NM_015528 ENSG00000108523 RNF167 5730408C10Rik|LP2254|RING105 ring finger protein 167 protein-coding chr6-244 chr6 138816142 138816374 + 22.8 0.000 intron (NM_001077706, intron 4 of 21) AmnSINE1|SINE|5S-Deu-L2 20147 NM_001195037 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr6-103 chr6 53250694 53250926 + 22.8 0.000 Intergenic Intergenic -26183 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr12-436 chr12 68240991 68241223 + 22.8 0.000 Intergenic L2a|LINE|L2 12497 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr4-175 chr4 8274880 8275112 + 22.8 0.000 intron (NM_053044, intron 1 of 8) intron (NM_053044, intron 1 of 8) 5242 NM_053044 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr5-275 chr5 55851259 55851491 + 22.6 0.000 promoter-TSS (NM_001242638) promoter-TSS (NM_001242638) 18 NM_001242637 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr7-397 chr7 134459072 134459304 + 22.6 0.000 promoter-TSS (NM_001628) promoter-TSS (NM_001628) 4 NR_144376 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr11-327 chr11 125063007 125063239 + 22.6 0.000 promoter-TSS (NM_198277) promoter-TSS (NM_198277) -182 NM_198277 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr1-1583 chr1 223721092 223721324 + 22.6 0.000 intron (NM_001146068, intron 2 of 20) intron (NM_001146068, intron 2 of 20) 8669 NM_001748 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr17-282 chr17 80832566 80832798 + 22.6 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -27050 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr7-849 chr7 138845293 138845525 + 22.6 0.000 intron (NM_020910, intron 17 of 19) Charlie1a|DNA|hAT-Charlie -47213 NM_020632 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr15-156 chr15 90953413 90953645 + 22.6 0.000 exon (NM_018671, exon 20 of 20) exon (NM_018671, exon 20 of 20) -1347 NM_001017919 91433 Hs.655895 NM_033544 ENSG00000166965 RCCD1 - RCC1 domain containing 1 protein-coding chr6-404 chr6 157627234 157627466 + 22.6 0.000 intron (NM_024630, intron 3 of 8) intron (NM_024630, intron 3 of 8) 98218 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr2-1077 chr2 182854415 182854647 + 22.6 0.000 intron (NM_001463, intron 2 of 5) L1MEf|LINE|L1 12106 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr11-379 chr11 10809442 10809674 + 22.6 0.000 promoter-TSS (NM_001418) promoter-TSS (NM_001418) 261 NR_120540 101928053 Hs.637773 NR_120540 ENSG00000246308 LOC101928053 - uncharacterized LOC101928053 ncRNA chr18-164 chr18 54134104 54134336 + 22.6 0.000 Intergenic Intergenic 88192 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr1-435 chr1 229514809 229515041 + 22.6 0.000 TTS (NR_110630) TTS (NR_110630) 6495 NR_110630 101927478 Hs.229275 NR_110630 LOC101927478 - uncharacterized LOC101927478 ncRNA chr1-995 chr1 167803356 167803588 + 22.6 0.000 Intergenic Intergenic 81490 NM_001146191 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr1-752 chr1 45929199 45929431 + 22.6 0.000 intron (NM_001324320, intron 4 of 29) intron (NM_001324320, intron 4 of 29) 64967 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr4-99 chr4 61103744 61103976 + 22.6 0.000 Intergenic AluSc8|SINE|Alu -39796 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA chr9-636 chr9 97396933 97397165 + 22.6 0.000 promoter-TSS (NR_026847) promoter-TSS (NR_026847) -358 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr10-479 chr10 97701401 97701633 + 22.6 0.000 Intergenic LTR41|LTR|ERVL -12213 NM_031484 83742 Hs.744073 NM_031484 ENSG00000155254 MARVELD1 GB14|MARVD1|MRVLDC1|bA548K23.8 MARVEL domain containing 1 protein-coding chr6-410 chr6 160141381 160141613 + 22.6 0.000 intron (NM_153187, intron 7 of 9) intron (NM_153187, intron 7 of 9) 19666 NM_153187 6580 Hs.117367 NM_003057 ENSG00000175003 SLC22A1 HOCT1|OCT1|oct1_cds solute carrier family 22 member 1 protein-coding chr6-213 chr6 43585125 43585357 + 22.6 0.000 intron (NM_001291969, intron 2 of 8) MER21B|LTR|ERVL 9056 NM_001291970 5429 Hs.655467 NM_006502 ENSG00000170734 POLH RAD30|RAD30A|XP-V|XPV DNA polymerase eta protein-coding chr2-381 chr2 36376819 36377051 + 22.6 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 21157 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr12-151 chr12 50247290 50247522 + 22.6 0.000 intron (NM_016357, intron 2 of 10) MLT1G1|LTR|ERVL-MaLR -13194 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA chr14-295 chr14 67430212 67430444 + 22.6 0.000 Intergenic Intergenic 11602 NR_049879 100847064 NR_049879 ENSG00000265993 MIR5694 - microRNA 5694 ncRNA chr18-185 chr18 7822098 7822330 + 22.6 0.000 intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 254898 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr3-925 chr3 195155320 195155552 + 22.6 0.000 intron (NM_152531, intron 3 of 3) intron (NM_152531, intron 3 of 3) 7565 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr16-585 chr16 12320023 12320255 + 22.6 0.000 intron (NM_032167, intron 15 of 20) L2b|LINE|L2 343405 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr8-349 chr8 121574417 121574649 + 22.6 0.000 Intergenic L3|LINE|CR1 -64813 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr14-311 chr14 85313900 85314132 + 22.6 0.000 Intergenic Intergenic 42084 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr3-663 chr3 127639727 127639959 + 22.6 0.000 intron (NM_015720, intron 2 of 7) MIRb|SINE|MIR 10658 NM_015720 50512 Hs.591290 NM_015720 ENSG00000114631 PODXL2 EG|PODLX2 podocalyxin like 2 protein-coding chr2-349 chr2 158970231 158970463 + 22.6 0.000 intron (NM_001350065, intron 1 of 27) intron (NM_001350065, intron 1 of 27) 1707 NR_146421 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr13-115 chr13 45411581 45411813 + 22.6 0.000 intron (NM_001010875, intron 1 of 9) intron (NM_001010875, intron 1 of 9) -6465 NR_047031 100874259 Hs.658038 NR_047031 ENSG00000251015 SLC25A30-AS1 - SLC25A30 antisense RNA 1 ncRNA chr2-1122 chr2 217707295 217707527 + 22.6 0.000 intron (NR_026597, intron 1 of 12) intron (NR_026597, intron 1 of 12) 49182 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA chr14-169 chr14 72074179 72074411 + 22.6 0.000 intron (NM_001370288, intron 2 of 16) AluJr|SINE|Alu 140768 NM_001370271 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr8-233 chr8 129939677 129939909 + 22.6 0.000 promoter-TSS (NM_001353299) promoter-TSS (NM_001353299) 18 NM_001353295 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr8-100 chr8 144265222 144265454 + 22.6 0.000 intron (NM_015201, intron 3 of 15) intron (NM_015201, intron 3 of 15) -1115 NM_001080514 642658 Hs.553250 NM_001008271 ENSG00000260428 SCX SCXA|SCXB|bHLHa48 scleraxis bHLH transcription factor protein-coding chr3-935 chr3 197907441 197907673 + 22.6 0.000 intron (NM_001323029, intron 9 of 11) ERVL-E-int|LTR|ERVL 42368 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr2-908 chr2 31666423 31666655 + 22.6 0.000 Intergenic Intergenic -85601 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr3-160 chr3 71542635 71542867 + 22.6 0.000 promoter-TSS (NR_031697) promoter-TSS (NR_031697) -662 NR_031697 100302112 NR_031697 ENSG00000221264 MIR1284 MIRN1284|hsa-mir-1284|mir-1284 microRNA 1284 ncRNA chr2-482 chr2 141241454 141241686 + 22.6 0.000 intron (NM_018557, intron 5 of 90) intron (NM_018557, intron 5 of 90) -654885 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr16-203 chr16 11202006 11202238 + 22.6 0.000 Intergenic Intergenic 54060 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr16-649 chr16 70157265 70157497 + 22.6 0.000 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) 16067 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr19-384 chr19 12294894 12295126 + 22.6 0.000 promoter-TSS (NM_001164276) promoter-TSS (NM_001164276) -111 NM_001353552 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr2-355 chr2 182866284 182866516 + 22.6 0.000 exon (NM_001463, exon 1 of 6) exon (NM_001463, exon 1 of 6) 237 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr1-402 chr1 19448628 19448860 + 22.4 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 35551 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr15-238 chr15 36161865 36162097 + 22.4 0.000 Intergenic Intergenic 235125 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr2-140 chr2 231200740 231200972 + 22.4 0.000 intron (NM_001352755, intron 1 of 20) AluSx|SINE|Alu 2225 NM_001291656 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr12-456 chr12 106123664 106123896 + 22.4 0.000 intron (NM_014840, intron 1 of 6) intron (NM_014840, intron 1 of 6) 16253 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr11-897 chr11 73206731 73206963 + 22.4 0.000 Intergenic L1MEd|LINE|L1 -11434 NM_176072 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr10-497 chr10 114624058 114624290 + 22.4 0.000 intron (NM_001322886, intron 1 of 20) intron (NM_001322886, intron 1 of 20) 8223 NM_001352440 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr17-305 chr17 31580958 31581190 + 22.4 0.000 Intergenic Intergenic 5663 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr14-72 chr14 49868267 49868499 + 22.4 0.000 Intergenic CpG -5534 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr19-289 chr19 45681466 45681698 + 22.4 0.000 intron (NM_001308418, intron 11 of 12) CpG -6574 NR_037512 100500845 NR_037512 ENSG00000283212 MIR642B mir-642b microRNA 642b ncRNA chr15-417 chr15 68115051 68115283 + 22.4 0.000 intron (NM_016166, intron 2 of 13) L1MC|LINE|L1 60591 NM_001320687 8554 Hs.162458 NM_016166 ENSG00000033800 PIAS1 DDXBP1|GBP|GU/RH-II|ZMIZ3 protein inhibitor of activated STAT 1 protein-coding chr22-366 chr22 24379563 24379795 + 22.4 0.000 intron (NM_001254732, intron 13 of 14) intron (NM_001254732, intron 13 of 14) 37571 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr15-337 chr15 79682977 79683209 + 22.4 0.000 Intergenic Charlie2a|DNA|hAT-Charlie 213904 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr17-635 chr17 28726672 28726904 + 22.4 0.000 promoter-TSS (NM_138463) promoter-TSS (NM_138463) 143 NM_001160407 116238 Hs.499952 NM_138463 ENSG00000160606 TLCD1 - TLC domain containing 1 protein-coding KI270519.1-1 KI270519.1 136582 136814 + 22.4 0.000 NA NA NA NA chr14-110 chr14 49861670 49861902 + 22.4 0.000 TTS (NR_027260) TTS (NR_027260) 1063 NR_027260 378706 NR_027260 ENSG00000274012 RN7SL2 7L1C|7L30.1|7SL1c|RNSRP2 RNA component of signal recognition particle 7SL2 scRNA chr6-218 chr6 63423184 63423416 + 22.4 0.000 Intergenic AluJb|SINE|Alu -103317 NM_016571 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr19-650 chr19 53395071 53395303 + 22.4 0.000 promoter-TSS (NM_001350496) promoter-TSS (NM_001350496) 38 NM_001350496 110116772 NM_001350496 ZNF765-ZNF761 - ZNF765-ZNF761 readthrough protein-coding chr8-132 chr8 26451294 26451526 + 22.4 0.000 Intergenic MIR1_Amn|SINE|MIR 60997 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr2-373 chr2 1572608 1572840 + 22.4 0.000 Intergenic Intergenic 158316 NM_175721 7173 Hs.467554 NM_000547 ENSG00000115705 TPO MSA|TDH2A|TPX thyroid peroxidase protein-coding chrX-133 chrX 79038706 79038938 + 22.4 0.000 Intergenic L1PA14|LINE|L1 93431 NM_014499 27334 Hs.296433 NM_014499 ENSG00000078589 P2RY10 LYPSR2|P2Y10 P2Y receptor family member 10 protein-coding chr2-945 chr2 48205491 48205723 + 22.4 0.000 Intergenic Intergenic -109075 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr9-536 chr9 107295802 107296034 + 22.4 0.000 intron (NM_001244713, intron 1 of 9) intron (NM_001244713, intron 1 of 9) 11149 NM_001244713 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr15-377 chr15 43201216 43201448 + 22.4 0.000 intron (NM_001114134, intron 12 of 12) L1ME5|LINE|L1 15929 NM_012142 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr20-74 chr20 31068009 31068241 + 22.4 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -189539 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr6-380 chr6 131976610 131976842 + 22.4 0.000 Intergenic LTR40b|LTR|ERVL -25354 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr3-552 chr3 129888873 129889105 + 22.4 0.000 intron (NM_001349271, intron 1 of 4) L1MC3|LINE|L1 4587 NM_001128224 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr2-374 chr2 11365010 11365242 + 22.4 0.000 Intergenic Intergenic -19689 NM_001321643 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr11-624 chr11 74318449 74318681 + 22.4 0.000 intron (NR_120556, intron 3 of 6) L1MD2|LINE|L1 -6925 NM_182904 283208 Hs.660541 NM_182904 ENSG00000149380 P4HA3 - prolyl 4-hydroxylase subunit alpha 3 protein-coding chr14-286 chr14 60387796 60388028 + 22.4 0.000 Intergenic L1MD1|LINE|L1 64716 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA chr13-229 chr13 75636705 75636937 + 22.4 0.000 promoter-TSS (NR_120410) promoter-TSS (NR_120410) 491 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr12-722 chr12 116171762 116171994 + 22.4 0.000 intron (NM_015335, intron 2 of 30) L3|LINE|CR1 -23224 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr6-217 chr6 53437620 53437852 + 22.4 0.000 Intergenic Intergenic -88557 NM_001242831 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr5-693 chr5 137157180 137157412 + 22.4 0.000 intron (NM_004598, intron 3 of 10) intron (NM_004598, intron 3 of 10) 29099 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr13-41 chr13 80341242 80341474 + 22.4 0.000 promoter-TSS (NM_005842) promoter-TSS (NM_005842) -232 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr1-1170 chr1 179017035 179017267 + 22.4 0.000 Intergenic Intergenic -8653 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr16-305 chr16 20851633 20851865 + 22.4 0.000 Intergenic Intergenic 45222 NM_001144924 81691 Hs.177926 NM_030941 ENSG00000005189 REXO5 NEF-sp RNA exonuclease 5 protein-coding chr16-389 chr16 558607 558839 + 22.4 0.000 Intergenic Intergenic -1671 NM_145270 146325 Hs.632220 NM_145270 ENSG00000161992 PRR35 C16orf11|LA16c-366D1.2 proline rich 35 protein-coding chr2-1006 chr2 106936518 106936750 + 22.4 0.000 Intergenic MLT2A2|LTR|ERVL -49525 NM_001142352 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr10-442 chr10 48951834 48952066 + 22.4 0.000 intron (NM_020945, intron 51 of 61) intron (NM_020945, intron 51 of 61) 33637 NR_036182 100422895 NR_036182 ENSG00000264800 MIR4294 - microRNA 4294 ncRNA chr3-108 chr3 150408731 150408963 + 22.4 0.000 non-coding (NR_130136, exon 1 of 5) non-coding (NR_130136, exon 1 of 5) 549 NM_014779 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr19-260 chr19 40718940 40719172 + 22.4 0.000 intron (NM_025194, intron 1 of 6) intron (NM_025194, intron 1 of 6) 1944 NM_025194 80271 Hs.515415 NM_025194 ENSG00000086544 ITPKC IP3-3KC|IP3KC inositol-trisphosphate 3-kinase C protein-coding chr4-178 chr4 52348018 52348250 + 22.4 0.000 Intergenic PRIMA41-int|LTR|ERV1 296830 NR_123728 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr11-800 chr11 26695881 26696113 + 22.4 0.000 intron (NM_178498, intron 8 of 14) L2a|LINE|L2 26063 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding chr17-808 chr17 52710269 52710501 + 22.4 0.000 Intergenic MER52C|LTR|ERV1 -151736 NR_146899 105371831 Hs.97791 NR_146899 ENSG00000226364 LINC02089 - long intergenic non-protein coding RNA 2089 ncRNA chr2-677 chr2 157898552 157898784 + 22.4 0.000 Intergenic Intergenic -22338 NM_001111067 90 Hs.470316 NM_001105 ENSG00000115170 ACVR1 ACTRI|ACVR1A|ACVRLK2|ALK2|FOP|SKR1|TSRI activin A receptor type 1 protein-coding chr14-159 chr14 50560494 50560726 + 22.4 0.000 intron (NM_015915, intron 1 of 13) CpG 585 NM_181598 51062 Hs.584905 NM_015915 ENSG00000198513 ATL1 AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1 atlastin GTPase 1 protein-coding chr5-152 chr5 33148124 33148356 + 22.2 0.000 Intergenic Intergenic -81495 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr12-661 chr12 64733666 64733898 + 22.2 0.000 intron (NM_002076, intron 9 of 13) intron (NM_002076, intron 9 of 13) 25624 NM_002076 2799 Hs.334534 NM_002076 ENSG00000135677 GNS G6S glucosamine (N-acetyl)-6-sulfatase protein-coding chr7-784 chr7 100409845 100410077 + 22.2 0.000 intron (NM_001258008, intron 8 of 15) intron (NM_001258008, intron 8 of 15) 18742 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chr9-386 chr9 134101731 134101963 + 22.2 0.000 Intergenic Intergenic -33821 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr12-491 chr12 5249135 5249367 + 22.2 0.000 Intergenic Intergenic -6100 NR_120476 101929584 Hs.436529 NR_120476 ENSG00000256115 LINC02443 - long intergenic non-protein coding RNA 2443 ncRNA chr1-392 chr1 231395780 231396012 + 22.2 0.000 intron (NM_022051, intron 1 of 4) intron (NM_022051, intron 1 of 4) 29148 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr3-472 chr3 11557504 11557736 + 22.2 0.000 TTS (NM_006395) TTS (NM_006395) 11178 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr14-236 chr14 91228190 91228422 + 22.2 0.000 Intergenic Intergenic 16398 NM_001177676 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr22-202 chr22 21824077 21824309 + 22.2 0.000 intron (NM_002745, intron 1 of 8) A-rich|Low_complexity|Low_complexity 43487 NM_002745 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr1-1328 chr1 38027567 38027799 + 22.2 0.000 Intergenic Intergenic 14949 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr20-224 chr20 39524583 39524815 + 22.2 0.000 Intergenic Intergenic -299951 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chrX-236 chrX 49880480 49880712 + 22.2 0.000 exon (NM_001145073, exon 1 of 1) exon (NM_001145073, exon 1 of 1) 1112 NM_001145073 389856 Hs.143587 NM_001145073 ENSG00000273820 USP27X MRX105|USP22L|USP27 ubiquitin specific peptidase 27 X-linked protein-coding chr12-483 chr12 127810129 127810361 + 22.2 0.000 Intergenic Intergenic -71372 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chrX-89 chrX 10756438 10756670 + 22.2 0.000 intron (NM_033290, intron 1 of 9) intron (NM_033290, intron 1 of 9) 77129 NM_033290 4281 Hs.27695 NM_000381 ENSG00000101871 MID1 BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY midline 1 protein-coding chr2-601 chr2 37460191 37460423 + 22.2 0.000 Intergenic Intergenic 115677 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr2-470 chr2 109331153 109331385 + 22.2 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -17644 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr11-562 chr11 35542104 35542336 + 22.2 0.000 Intergenic Intergenic -11920 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr8-597 chr8 141982314 141982546 + 22.2 0.000 Intergenic Intergenic -193909 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr10-736 chr10 91341004 91341236 + 22.2 0.000 intron (NR_024467, intron 4 of 4) intron (NR_024467, intron 4 of 4) -68115 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr5-117 chr5 154753907 154754139 + 22.2 0.000 intron (NM_001367717, intron 1 of 18) MER5A|DNA|hAT-Charlie -1354 NM_001367718 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr11-468 chr11 88544406 88544638 + 22.2 0.000 intron (NM_001143831, intron 7 of 8) intron (NM_001143831, intron 7 of 8) 39946 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr17-811 chr17 56680244 56680476 + 22.2 0.000 Intergenic L2a|LINE|L2 86661 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr17-387 chr17 8383270 8383502 + 22.2 0.000 promoter-TSS (NM_001315530) promoter-TSS (NM_001315530) -193 NM_000987 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr1-626 chr1 35506118 35506350 + 22.2 0.000 intron (NM_024874, intron 3 of 20) intron (NM_024874, intron 3 of 20) 51169 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr9-450 chr9 109012259 109012491 + 22.2 0.000 intron (NM_003798, intron 1 of 18) L3|LINE|CR1 1124 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr14-470 chr14 102795196 102795428 + 22.2 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 17833 NM_145725 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr8-138 chr8 52713427 52713659 + 22.2 0.000 intron (NM_001083617, intron 1 of 23) CpG 892 NM_014781 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding chr4-400 chr4 174816077 174816309 + 22.2 0.000 intron (NM_006529, intron 1 of 9) intron (NM_006529, intron 1 of 9) 13054 NM_001042543 8001 Hs.413099 NM_006529 ENSG00000145451 GLRA3 - glycine receptor alpha 3 protein-coding chr10-229 chr10 97407223 97407455 + 22.2 0.000 Intergenic Intergenic -5969 NM_001145114 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr7-645 chr7 2412878 2413110 + 22.2 0.000 intron (NM_018641, intron 1 of 1) intron (NM_018641, intron 1 of 1) 9383 NM_001243795 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr17-494 chr17 79585882 79586114 + 22.2 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 25053 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr2-1037 chr2 142866012 142866244 + 22.2 0.000 Intergenic Intergenic -11536 NM_001032998 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr1-1309 chr1 29433656 29433888 + 22.2 0.000 Intergenic L3|LINE|CR1 -83658 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr1-368 chr1 150974224 150974456 + 22.2 0.000 intron (NM_181746, intron 1 of 10) CpG 495 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr6-539 chr6 52543644 52543876 + 22.2 0.000 intron (NM_012288, intron 1 of 10) L5|LINE|RTE-X 33300 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr9-485 chr9 132826191 132826423 + 22.2 0.000 intron (NM_001317959, intron 10 of 14) intron (NM_001317959, intron 10 of 14) -52037 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr3-556 chr3 134461071 134461303 + 22.2 0.000 Intergenic Intergenic 23360 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr4-578 chr4 87300035 87300267 + 22.2 0.000 TTS (NR_049891) TTS (NR_049891) 432 NR_049891 100847027 NR_049891 ENSG00000263981 MIR5705 - microRNA 5705 ncRNA chr15-93 chr15 34337768 34338000 + 22.2 0.000 promoter-TSS (NM_001042494) promoter-TSS (NM_001042494) -103 NM_001365088 9990 Hs.510939 NM_005135 ENSG00000140199 SLC12A6 ACCPN|KCC3|KCC3A|KCC3B solute carrier family 12 member 6 protein-coding chr17-482 chr17 62755425 62755657 + 22.2 0.000 intron (NM_001288779, intron 4 of 11) intron (NM_001288779, intron 4 of 11) 49335 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr1-983 chr1 156005172 156005404 + 22.2 0.000 Intergenic Intergenic 15663 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr10-304 chr10 13338569 13338801 + 22.2 0.000 intron (NM_001195602, intron 2 of 7) intron (NM_001195602, intron 2 of 7) 9608 NM_012247 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr2-1022 chr2 120141154 120141386 + 22.2 0.000 intron (NM_001330310, intron 18 of 24) intron (NM_001330310, intron 18 of 24) 82130 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding chr6-396 chr6 151276403 151276635 + 22.2 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 36552 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr2-553 chr2 182447956 182448188 + 22.2 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) -21024 NM_001258313 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr4-206 chr4 1229923 1230155 + 22.2 0.000 intron (NM_001012614, intron 3 of 9) intron (NM_001012614, intron 3 of 9) 19091 NM_001328 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr12-613 chr12 42519936 42520168 + 22.2 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) -36042 NM_001144882 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr17-365 chr17 41835433 41835665 + 22.2 0.000 promoter-TSS (NM_001329595) promoter-TSS (NM_001329595) -136 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding chr6-387 chr6 139753611 139753843 + 22.2 0.000 Intergenic Intergenic -17346 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr8-546 chr8 108713714 108713946 + 22.2 0.000 intron (NR_136411, intron 1 of 3) Ricksha_c|DNA|MULE-MuDR 73764 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding chr18-238 chr18 63788570 63788802 + 22.2 0.000 intron (NM_001261831, intron 2 of 6) Tigger3b|DNA|TcMar-Tigger 10909 NM_001261830 8710 Hs.138202 NM_003784 ENSG00000166396 SERPINB7 MEGSIN|PPKN|TP55 serpin family B member 7 protein-coding chr20-161 chr20 9067956 9068188 + 22.2 0.000 promoter-TSS (NM_001172646) promoter-TSS (NM_001172646) -982 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-589 chr1 3548245 3548477 + 22.2 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) 12429 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr5-29 chr5 115626155 115626387 + 22.2 0.000 promoter-TSS (NM_001164468) promoter-TSS (NM_001164468) -92 NM_001164469 100302736 NM_001164468 ENSG00000251201 TMED7-TICAM2 MyD88-4|TICAM-2|TICAM2|TIRAP3|TIRP|TRAM TMED7-TICAM2 readthrough protein-coding chr19-617 chr19 23739336 23739568 + 22.2 0.000 3' UTR (NM_138286, exon 4 of 4) 3' UTR (NM_138286, exon 4 of 4) 19439 NM_138286 148213 Hs.399952 NM_138286 ENSG00000196172 ZNF681 - zinc finger protein 681 protein-coding chr5-281 chr5 104369067 104369299 + 22.0 0.000 Intergenic (TTCC)n|Simple_repeat|Simple_repeat -730291 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr1-1201 chr1 244638259 244638491 + 22.0 0.000 intron (NM_001130957, intron 21 of 21) L2c|LINE|L2 -14673 NR_123736 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr2-977 chr2 74715163 74715395 + 22.0 0.000 Intergenic Intergenic 61032 NM_004263 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr12-174 chr12 47935215 47935447 + 22.0 0.000 Intergenic MamRTE1|LINE|RTE-BovB -28216 NM_024056 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr12-524 chr12 64010020 64010252 + 22.0 0.000 intron (NM_001346201, intron 3 of 21) intron (NM_001346201, intron 3 of 21) 165436 NM_001346201 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr8-110 chr8 57000514 57000746 + 22.0 0.000 Intergenic AluSz|SINE|Alu -6763 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr1-889 chr1 35454642 35454874 + 22.0 0.000 intron (NM_024874, intron 10 of 20) intron (NM_024874, intron 10 of 20) -88681 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr1-1571 chr1 217029698 217029930 + 22.0 0.000 intron (NM_001243509, intron 1 of 8) intron (NM_001243509, intron 1 of 8) 47178 NM_001243509 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr8-254 chr8 29028418 29028650 + 22.0 0.000 intron (NM_001324384, intron 6 of 10) intron (NM_001324384, intron 6 of 10) 137220 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr8-348 chr8 121406851 121407083 + 22.0 0.000 Intergenic MER121|DNA|hAT? -232379 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr2-411 chr2 222652104 222652336 + 22.0 0.000 intron (NR_130154, intron 1 of 17) MLT1F2-int|LTR|ERVL-MaLR 3872 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr17-583 chr17 74380537 74380769 + 22.0 0.000 Intergenic Intergenic 13147 NM_181790 350383 Hs.574368 NM_181790 ENSG00000257008 GPR142 GPRg1b|PGR2 G protein-coupled receptor 142 protein-coding chr12-444 chr12 92396983 92397215 + 22.0 0.000 Intergenic Intergenic -24432 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr19-614 chr19 21082039 21082271 + 22.0 0.000 promoter-TSS (NM_182515) promoter-TSS (NM_182515) 8 NR_117087 148206 Hs.729186 NM_182515 ENSG00000160352 ZNF714 - zinc finger protein 714 protein-coding chr4-664 chr4 165688372 165688604 + 22.0 0.000 intron (NR_121676, intron 2 of 5) Charlie25|DNA|hAT-Charlie 3849 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr9-167 chr9 132079871 132080103 + 22.0 0.000 promoter-TSS (NM_004269) promoter-TSS (NM_004269) -120 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr10-365 chr10 13757500 13757732 + 22.0 0.000 intron (NM_001318336, intron 7 of 23) intron (NM_001318336, intron 7 of 23) -50049 NM_001318338 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr12-559 chr12 501833 502065 + 22.0 0.000 intron (NM_173593, intron 1 of 19) intron (NM_173593, intron 1 of 19) 42010 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding chr2-1078 chr2 185608826 185609058 + 22.0 0.000 Intergenic Intergenic 129777 NR_110215 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA chr5-327 chr5 41794568 41794800 + 22.0 0.000 exon (NM_001364300, exon 12 of 17) exon (NM_001364300, exon 12 of 17) 48973 NM_001364303 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr2-934 chr2 44578546 44578778 + 22.0 0.000 intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 216715 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr13-287 chr13 47499810 47500042 + 22.0 0.000 Intergenic Intergenic 432696 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr20-165 chr20 25540076 25540308 + 22.0 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 45339 NM_025176 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr2-813 chr2 131684969 131685201 + 22.0 0.000 intron (NR_149016, intron 2 of 5) L1MA6|LINE|L1 2586 NR_149015 29798 Hs.635289 NM_013310 C2orf27A C2orf27|C2orf27B chromosome 2 open reading frame 27A protein-coding chr11-243 chr11 33208413 33208645 + 22.0 0.000 Intergenic Intergenic 46872 NR_034027 338739 Hs.423476 NR_034027 ENSG00000247151 CSTF3-DT CSTF3-AS1 CSTF3 divergent transcript ncRNA chr16-245 chr16 68790192 68790424 + 22.0 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 53016 NM_001317185 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr4-386 chr4 148214712 148214944 + 22.0 0.000 intron (NM_000901, intron 3 of 8) MER102b|DNA|hAT-Charlie 227586 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr19-596 chr19 13033979 13034211 + 22.0 0.000 intron (NM_001365984, intron 1 of 9) MIRc|SINE|MIR 9316 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr1-979 chr1 154870135 154870367 + 22.0 0.000 promoter-TSS (NM_002249) promoter-TSS (NM_002249) 27 NM_001204087 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr7-604 chr7 101942033 101942265 + 22.0 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 124523 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr14-255 chr14 63893536 63893768 + 22.0 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 40648 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr13-61 chr13 63435833 63436065 + 22.0 0.000 Intergenic LTR8B|LTR|ERV1 -107855 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr22-106 chr22 46147859 46148091 + 22.0 0.000 Intergenic Intergenic -2551 NM_001362872 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr7-114 chr7 100802282 100802514 + 22.0 0.000 TTS (NM_004444) TTS (NM_004444) -24471 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr13-206 chr13 113493327 113493559 + 22.0 0.000 intron (NR_146222, intron 1 of 11) intron (NR_146222, intron 1 of 11) 2422 NM_001349745 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr12-271 chr12 1443636 1443868 + 22.0 0.000 intron (NR_027948, intron 18 of 19) intron (NR_027948, intron 18 of 19) -56739 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr17-640 chr17 32576148 32576380 + 22.0 0.000 intron (NM_015194, intron 21 of 21) intron (NM_015194, intron 21 of 21) 89271 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding chr17-394 chr17 29180456 29180688 + 22.0 0.000 promoter-TSS (NM_203318) promoter-TSS (NM_203318) -174 NM_078471 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr20-270 chr20 36265071 36265303 + 22.0 0.000 Intergenic MIR|SINE|MIR 28709 NM_001271874 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr17-312 chr17 48585399 48585631 + 22.0 0.000 Intergenic Intergenic -3136 NM_001330322 3213 Hs.654560 NM_002146 ENSG00000120093 HOXB3 HOX2|HOX2G|Hox-2.7 homeobox B3 protein-coding chr2-680 chr2 159516291 159516523 + 22.0 0.000 intron (NM_001329858, intron 2 of 36) intron (NM_001329858, intron 2 of 36) -98887 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr6-147 chr6 32609909 32610141 + 22.0 0.000 Intergenic Intergenic -20189 NM_001243965 3123 Hs.534322 NM_002124 ENSG00000196126 HLA-DRB1 DRB1|HLA-DR1B|HLA-DRB|SS1 major histocompatibility complex, class II, DR beta 1 protein-coding chr7-701 chr7 41579819 41580051 + 22.0 0.000 Intergenic Intergenic -113984 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr7-609 chr7 116911732 116911964 + 22.0 0.000 intron (NM_006136, intron 7 of 9) intron (NM_006136, intron 7 of 9) -41653 NM_001369598 7982 Hs.368131 NM_018412 ENSG00000004866 ST7 ETS7q|FAM4A|FAM4A1|HELG|RAY1|SEN4|TSG7 suppression of tumorigenicity 7 protein-coding chr13-309 chr13 71169445 71169677 + 22.0 0.000 Intergenic Intergenic 154420 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr8-427 chr8 143462816 143463048 + 22.0 0.000 intron (NM_015117, intron 9 of 11) L1ME1|LINE|L1 -32200 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr3-240 chr3 28286627 28286859 + 22.0 0.000 intron (NM_182523, intron 2 of 3) intron (NM_182523, intron 2 of 3) 45124 NM_182523 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr12-410 chr12 46383346 46383578 + 22.0 0.000 promoter-TSS (NR_125377) promoter-TSS (NR_125377) -214 NR_125380 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr7-470 chr7 33904384 33904616 + 22.0 0.000 promoter-TSS (NM_133468) promoter-TSS (NM_133468) -415 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr3-729 chr3 29465915 29466147 + 22.0 0.000 intron (NM_001003792, intron 2 of 13) intron (NM_001003792, intron 2 of 13) 184719 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr15-323 chr15 59335309 59335541 + 22.0 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 37446 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr9-192 chr9 125235024 125235256 + 22.0 0.000 TTS (NM_005833) TTS (NM_005833) 6203 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr8-20 chr8 141128282 141128514 + 22.0 0.000 promoter-TSS (NM_001352890) promoter-TSS (NM_001352890) -191 NM_001352890 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr7-301 chr7 116528052 116528284 + 21.8 0.000 intron (NM_001753, intron 2 of 2) intron (NM_001753, intron 2 of 2) 1806 NM_001172896 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr10-448 chr10 52620426 52620658 + 21.8 0.000 intron (NR_155748, intron 1 of 2) LTR41C|LTR|ERVL 134862 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA chr9-388 chr9 134732199 134732431 + 21.8 0.000 intron (NM_001278074, intron 9 of 65) intron (NM_001278074, intron 9 of 65) -79472 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr13-122 chr13 97268721 97268953 + 21.8 0.000 intron (NM_144778, intron 1 of 8) L2b|LINE|L2 46504 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr2-184 chr2 110677949 110678181 + 21.8 0.000 promoter-TSS (NM_004336) promoter-TSS (NM_004336) -2 NM_004336 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding chrX-290 chrX 147305245 147305477 + 21.8 0.000 Intergenic L1MD|LINE|L1 -20633 NR_030239 574517 NR_030239 ENSG00000207866 MIR514A2 MIR514-2|MIRN514-2|hsa-mir-514a-2 microRNA 514a-2 ncRNA chr1-1162 chr1 160948120 160948352 + 21.8 0.000 intron (NM_080878, intron 6 of 7) intron (NM_080878, intron 6 of 7) 6573 NM_080878 142683 Hs.385631 NM_080878 ENSG00000158764 ITLN2 HL-2|HL2 intelectin 2 protein-coding chr10-172 chr10 100286155 100286387 + 21.8 0.000 promoter-TSS (NM_001001342) promoter-TSS (NM_001001342) 93 NM_001001342 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr5-324 chr5 17744036 17744268 + 21.8 0.000 Intergenic Intergenic -63122 NR_134286 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr3-892 chr3 167496412 167496644 + 21.8 0.000 intron (NM_001348951, intron 18 of 18) L2c|LINE|L2 -22396 NM_006217 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr5-663 chr5 122093516 122093748 + 21.8 0.000 Intergenic Intergenic -15373 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding chr12-134 chr12 49130222 49130454 + 21.8 0.000 intron (NM_006082, intron 1 of 3) CpG 1057 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr3-796 chr3 73490961 73491193 + 21.8 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -16445 NM_001303141 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr8-520 chr8 85537778 85538010 + 21.8 0.000 Intergenic Intergenic -72979 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr18-99 chr18 6855146 6855378 + 21.8 0.000 intron (NM_001010000, intron 3 of 16) MER52A|LTR|ERV1 20777 NM_001010000 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr14-397 chr14 53055027 53055259 + 21.8 0.000 intron (NM_030637, intron 10 of 11) intron (NM_030637, intron 10 of 11) 98180 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr8-406 chr8 97069024 97069256 + 21.8 0.000 intron (NM_016134, intron 7 of 7) intron (NM_016134, intron 7 of 7) 208788 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr9-436 chr9 94920564 94920796 + 21.8 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 24874 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr2-849 chr2 216151554 216151786 + 21.8 0.000 intron (NM_021141, intron 14 of 20) MIR|SINE|MIR 42322 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding chr4-367 chr4 109207184 109207416 + 21.8 0.000 intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 95358 NM_032518 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding chr8-575 chr8 127918575 127918807 + 21.8 0.000 intron (NR_003367, intron 2 of 8) intron (NR_003367, intron 2 of 8) 30032 NR_103558 641384 Hs.629674 NM_001037234 ENSG00000280055 TMEM75 - transmembrane protein 75 ncRNA chrX-137 chrX 99448763 99448995 + 21.8 0.000 Intergenic L1PB4|LINE|L1 961394 NM_001184880 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-527 chr8 90712295 90712527 + 21.8 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -66328 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr9-258 chr9 120477603 120477835 + 21.8 0.000 intron (NR_073558, intron 14 of 37) intron (NR_073558, intron 14 of 37) 102448 NR_073558 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr16-519 chr16 66332597 66332829 + 21.8 0.000 Intergenic Intergenic -33978 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr5-494 chr5 36625646 36625878 + 21.8 0.000 intron (NM_001289939, intron 2 of 8) intron (NM_001289939, intron 2 of 8) 19156 NM_004172 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr12-411 chr12 46964236 46964468 + 21.8 0.000 Intergenic Intergenic -115251 NM_001281429 91523 Hs.560100 NM_138371 ENSG00000179715 PCED1B FAM113B PC-esterase domain containing 1B protein-coding chrX-259 chrX 98078904 98079136 + 21.8 0.000 Intergenic Intergenic -514485 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr10-692 chr10 73077016 73077248 + 21.8 0.000 intron (NM_001017962, intron 1 of 14) intron (NM_001017962, intron 1 of 14) 19842 NM_000917 5033 Hs.500047 NM_000917 ENSG00000122884 P4HA1 P4HA prolyl 4-hydroxylase subunit alpha 1 protein-coding chr1-538 chr1 29124386 29124618 + 21.8 0.000 promoter-TSS (NM_001003682) promoter-TSS (NM_001003682) -599 NM_001003682 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr3-440 chr3 68094828 68095060 + 21.8 0.000 intron (NM_001252216, intron 2 of 4) intron (NM_001252216, intron 2 of 4) 90697 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chr2-554 chr2 182715496 182715728 + 21.8 0.000 promoter-TSS (NM_018981) promoter-TSS (NM_018981) -645 NR_073367 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding chr1-337 chr1 1079625 1079857 + 21.8 0.000 Intergenic Intergenic -5435 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr5-681 chr5 132536267 132536499 + 21.8 0.000 Intergenic LTR50|LTR|ERVL 7139 NM_000879 3567 Hs.2247 NM_000879 ENSG00000113525 IL5 EDF|IL-5|TRF interleukin 5 protein-coding chr7-276 chr7 44986741 44986973 + 21.8 0.000 promoter-TSS (NR_152597) promoter-TSS (NR_152597) -161 NR_152596 285958 Hs.25892 NR_003697 ENSG00000232956 SNHG15 C7orf40|Linc-Myo1g|MYO1GUT small nucleolar RNA host gene 15 ncRNA chr5-430 chr5 120454498 120454730 + 21.8 0.000 Intergenic Intergenic -9664 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr2-259 chr2 238684703 238684935 + 21.8 0.000 Intergenic Intergenic -129320 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr2-178 chr2 36368083 36368315 + 21.8 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 12421 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr5-751 chr5 180620654 180620886 + 21.8 0.000 intron (NM_002020, intron 15 of 29) CpG-22961 28830 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr10-275 chr10 7554190 7554422 + 21.8 0.000 Intergenic Intergenic 65367 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr2-500 chr2 199955554 199955786 + 21.8 0.000 promoter-TSS (NR_109906) promoter-TSS (NR_109906) -179 NR_109906 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chrX-61 chrX 29290604 29290836 + 21.8 0.000 intron (NM_014271, intron 3 of 10) MLT1H|LTR|ERVL-MaLR -283558 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr1-480 chr1 56577236 56577468 + 21.8 0.000 intron (NM_003713, intron 1 of 5) intron (NM_003713, intron 1 of 5) 2211 NM_003713 8613 Hs.405156 NM_003713 ENSG00000162407 PLPP3 Dri42|LPP3|PAP2B|PPAP2B|VCIP phospholipid phosphatase 3 protein-coding chr17-745 chr17 17940753 17940985 + 21.8 0.000 intron (NM_001288787, intron 1 of 13) intron (NM_001288787, intron 1 of 13) 31531 NM_001350333 146691 Hs.462379 NM_144678 ENSG00000175662 TOM1L2 - target of myb1 like 2 membrane trafficking protein protein-coding chr17-383 chr17 4509505 4509737 + 21.6 0.000 intron (NM_001124758, intron 1 of 12) L2|LINE|L2 10740 NM_001124758 124976 Hs.22824 NM_001124758 ENSG00000183018 SPNS2 DFNB115|SLC62A2 sphingolipid transporter 2 protein-coding chr8-211 chr8 53588237 53588469 + 21.6 0.000 Intergenic Intergenic -64388 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr6-548 chr6 74835115 74835347 + 21.6 0.000 Intergenic MER112|DNA|hAT-Charlie 293551 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA GL000225.1-3 GL000225.1 117674 117906 + 21.6 0.000 NA NA NA NA chr16-506 chr16 28171986 28172218 + 21.6 0.000 intron (NM_001270940, intron 5 of 24) intron (NM_001270940, intron 5 of 24) 39863 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr12-201 chr12 11719727 11719959 + 21.6 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 69989 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chrX-24 chrX 47659110 47659342 + 21.6 0.000 promoter-TSS (NM_153477) promoter-TSS (NM_153477) -46 NM_004182 8409 Hs.172791 NM_004182 ENSG00000126756 UXT ART-27|STAP1 ubiquitously expressed prefoldin like chaperone protein-coding chr22-196 chr22 20127675 20127907 + 21.6 0.000 TTS (NM_001278640) TTS (NM_001278640) 1389 NR_145765 109617010 NR_145765 ENSG00000264346 SNORA77B - small nucleolar RNA, H/ACA box 77B snoRNA chr6-464 chr6 137467366 137467598 + 21.6 0.000 Intergenic MER70A|LTR|ERVL 26912 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding chr19-360 chr19 37334517 37334749 + 21.6 0.000 promoter-TSS (NM_001329761) promoter-TSS (NM_001329761) 9 NM_001329773 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr1-652 chr1 81306027 81306259 + 21.6 0.000 promoter-TSS (NM_001366004) promoter-TSS (NM_001366004) -49 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr19-558 chr19 1720411 1720643 + 21.6 0.000 Intergenic L2b|LINE|L2 -32979 NM_001080488 390874 NM_001080488 ENSG00000205922 ONECUT3 OC3 one cut homeobox 3 protein-coding chr3-307 chr3 196406915 196407147 + 21.6 0.000 intron (NM_015562, intron 2 of 10) intron (NM_015562, intron 2 of 10) -24354 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr2-300 chr2 30979895 30980127 + 21.6 0.000 intron (NM_001253826, intron 3 of 15) intron (NM_001253826, intron 3 of 15) 149629 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding chr2-516 chr2 234959306 234959538 + 21.6 0.000 intron (NM_014521, intron 1 of 5) intron (NM_014521, intron 1 of 5) -5917 NM_001371302 chr5-363 chr5 178447325 178447557 + 21.6 0.000 intron (NM_173465, intron 2 of 28) Tigger3a|DNA|TcMar-Tigger 142952 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr12-275 chr12 1618451 1618683 + 21.6 0.000 intron (NM_030775, intron 1 of 4) intron (NM_030775, intron 1 of 4) 1511 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr3-309 chr3 1379244 1379476 + 21.6 0.000 intron (NM_001289080, intron 17 of 22) MER58A|DNA|hAT-Charlie 286336 NM_001349362 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr9-664 chr9 117324616 117324848 + 21.6 0.000 intron (NM_014010, intron 1 of 21) L2c|LINE|L2 90325 NM_001365069 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr5-314 chr5 172931090 172931322 + 21.6 0.000 intron (NM_001031711, intron 7 of 9) intron (NM_001031711, intron 7 of 9) 16123 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr17-820 chr17 60231575 60231807 + 21.6 0.000 promoter-TSS (NR_002999) promoter-TSS (NR_002999) -46 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA chr2-837 chr2 199988153 199988385 + 21.6 0.000 Intergenic Intergenic -32778 NR_109906 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr4-248 chr4 57105020 57105252 + 21.6 0.000 intron (NM_001553, intron 1 of 4) intron (NM_001553, intron 1 of 4) -4626 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr3-397 chr3 171029427 171029659 + 21.6 0.000 Intergenic L2a|LINE|L2 -2823 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr3-549 chr3 129234237 129234469 + 21.6 0.000 Intergenic AluSz|SINE|Alu -15253 NM_016128 22820 Hs.518250 NM_016128 ENSG00000181789 COPG1 COPG coatomer protein complex subunit gamma 1 protein-coding chr10-413 chr10 623869 624101 + 21.6 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -4579 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr5-389 chr5 52800589 52800821 + 21.6 0.000 exon (NM_015946, exon 2 of 3) exon (NM_015946, exon 2 of 3) 12789 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding chr20-220 chr20 36821002 36821234 + 21.6 0.000 intron (NM_199181, intron 3 of 14) L1ME4b|LINE|L1 38755 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr20-398 chr20 62925455 62925687 + 21.6 0.000 intron (NM_022105, intron 1 of 5) intron (NM_022105, intron 1 of 5) 934 NM_001193370 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr11-242 chr11 19712634 19712866 + 21.6 0.000 promoter-TSS (NM_001244963) promoter-TSS (NM_001244963) -87 NM_182964 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr10-498 chr10 117433617 117433849 + 21.6 0.000 Intergenic Intergenic -58293 NM_173791 118987 Hs.501149 NM_173791 ENSG00000165650 PDZD8 PDZK8 PDZ domain containing 8 protein-coding chr16-296 chr16 4067356 4067588 + 21.6 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 48970 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr1-514 chr1 218377338 218377570 + 21.6 0.000 intron (NR_138149, intron 2 of 7) intron (NR_138149, intron 2 of 7) -31776 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr8-555 chr8 117920638 117920870 + 21.6 0.000 TTS (NR_145799) TTS (NR_145799) 159 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr13-128 chr13 99626712 99626944 + 21.6 0.000 intron (NR_104592, intron 1 of 9) intron (NR_104592, intron 1 of 9) -16231 NR_036191 100422861 NR_036191 ENSG00000263615 MIR4306 mir-4306 microRNA 4306 ncRNA chr2-743 chr2 240109961 240110193 + 21.6 0.000 Intergenic Intergenic 26228 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr10-643 chr10 34299178 34299410 + 21.6 0.000 intron (NM_001184790, intron 18 of 22) intron (NM_001184790, intron 18 of 22) 516002 NM_001184794 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr7-668 chr7 7157133 7157365 + 21.6 0.000 Intergenic Intergenic -25366 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr1-438 chr1 1125571 1125803 + 21.6 0.000 Intergenic Intergenic -9598 NM_017891 54991 Hs.235095 NM_017891 ENSG00000131591 C1orf159 - chromosome 1 open reading frame 159 protein-coding chr22-268 chr22 22835141 22835373 + 21.6 0.000 Intergenic Intergenic 12481 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA chr19-363 chr19 43827274 43827506 + 21.6 0.000 promoter-TSS (NM_181845) promoter-TSS (NM_181845) 69 NM_181845 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding chr8-141 chr8 97375729 97375961 + 21.6 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) 17580 NR_145760 109617016 NR_145760 ENSG00000207215 SNORD3H - small nucleolar RNA, C/D box 3H snoRNA chr15-478 chr15 96348486 96348718 + 21.4 0.000 Intergenic Intergenic 14837 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr2-950 chr2 50053240 50053472 + 21.4 0.000 exon (NM_001135659, exon 22 of 24) exon (NM_001135659, exon 22 of 24) -79153 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr10-446 chr10 51667693 51667925 + 21.4 0.000 intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) 31786 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr9-16 chr9 2490009 2490241 + 21.4 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -131662 NM_001322226 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr7-313 chr7 1562690 1562922 + 21.4 0.000 Intergenic Intergenic -6601 NM_001097620 202915 Hs.592174 NM_152689 ENSG00000164855 TMEM184A SDMG1 transmembrane protein 184A protein-coding chr7-372 chr7 73974232 73974464 + 21.4 0.000 Intergenic Intergenic -53441 NM_001278918 2006 Hs.647061 NM_000501 ENSG00000049540 ELN ADCL1|SVAS|WBS|WS elastin protein-coding chr1-174 chr1 158999786 159000018 + 21.4 0.000 promoter-TSS (NM_001364867) promoter-TSS (NM_001364867) -74 NM_001364867 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr17-552 chr17 42248630 42248862 + 21.4 0.000 intron (NM_012448, intron 1 of 18) intron (NM_012448, intron 1 of 18) 27660 NM_012448 6777 Hs.595276 NM_012448 ENSG00000173757 STAT5B STAT5 signal transducer and activator of transcription 5B protein-coding chr15-80 chr15 42457935 42458167 + 21.4 0.000 promoter-TSS (NM_022473) promoter-TSS (NM_022473) -484 NM_022473 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr1-386 chr1 226870835 226871067 + 21.4 0.000 intron (NM_000447, intron 1 of 12) CpG 335 NM_000447 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr1-1049 chr1 235865299 235865531 + 21.4 0.000 intron (NR_102436, intron 1 of 3) L2a|LINE|L2 1512 NM_000081 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr22-159 chr22 31102302 31102534 + 21.4 0.000 intron (NM_001207018, intron 19 of 19) intron (NM_001207018, intron 19 of 19) 5150 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding chr9-662 chr9 116328091 116328323 + 21.4 0.000 intron (NM_002581, intron 10 of 21) intron (NM_002581, intron 10 of 21) 72399 NR_103711 493913 Hs.728832 NR_103711 ENSG00000256040 PAPPA-AS1 DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 PAPPA antisense RNA 1 ncRNA chr2-308 chr2 37637363 37637595 + 21.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 34720 NM_001270437 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr9-356 chr9 81125530 81125762 + 21.4 0.000 Intergenic MER34B-int|LTR|ERV1 563889 NM_001303103 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding chr14-290 chr14 63492554 63492786 + 21.4 0.000 intron (NM_001354926, intron 2 of 2) intron (NM_001354926, intron 2 of 2) 15568 NM_001282182 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr22-218 chr22 40331826 40332058 + 21.4 0.000 3' UTR (NM_001024843, exon 24 of 24) 3' UTR (NM_001024843, exon 24 of 24) -14558 NM_001317923 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr12-676 chr12 85237218 85237450 + 21.4 0.000 intron (NM_001079910, intron 26 of 26) L1MD2|LINE|L1 -42886 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr3-357 chr3 42117688 42117920 + 21.4 0.000 intron (NM_001349247, intron 1 of 16) intron (NM_001349247, intron 1 of 16) 26447 NM_001349246 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr17-430 chr17 67158257 67158489 + 21.4 0.000 intron (NM_001330447, intron 17 of 32) intron (NM_001330447, intron 17 of 32) -86403 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA chr15-420 chr15 68644684 68644916 + 21.4 0.000 intron (NM_001324015, intron 1 of 11) intron (NM_001324015, intron 1 of 11) 3297 NM_001324015 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr13-147 chr13 70009190 70009422 + 21.4 0.000 intron (NM_020866, intron 1 of 10) L2c|LINE|L2 -97907 NR_002717 6315 Hs.676453 NR_002717 ATXN8OS KLHL1AS|NCRNA00003|SCA8 ATXN8 opposite strand lncRNA ncRNA chr2-508 chr2 222270698 222270930 + 21.4 0.000 intron (NM_181457, intron 4 of 7) intron (NM_181457, intron 4 of 7) -27333 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr11-662 chr11 305129 305361 + 21.4 0.000 Intergenic MER4D0|LTR|ERV1 -2862 NM_006435 10581 Hs.709321 NM_006435 ENSG00000185201 IFITM2 1-8D|DSPA2c interferon induced transmembrane protein 2 protein-coding chr9-60 chr9 114805973 114806205 + 21.4 0.000 promoter-TSS (NM_005118) promoter-TSS (NM_005118) -50 NM_005118 9966 Hs.23349 NM_005118 ENSG00000181634 TNFSF15 TL1|TL1A|TNLG1B|VEGI|VEGI192A TNF superfamily member 15 protein-coding chr1-910 chr1 44809329 44809561 + 21.4 0.000 intron (NM_001136537, intron 1 of 7) intron (NM_001136537, intron 1 of 7) 963 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr11-944 chr11 105517442 105517674 + 21.4 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -92515 NM_001077243 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chrX-238 chrX 53263625 53263857 + 21.4 0.000 intron (NM_001111125, intron 2 of 14) intron (NM_001111125, intron 2 of 14) 17843 NM_015075 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr9-194 chr9 128882385 128882617 + 21.4 0.000 promoter-TSS (NM_001127244) promoter-TSS (NM_001127244) -1 NM_001127244 56262 Hs.643600 NM_019594 ENSG00000136802 LRRC8A AGM5|LRRC8|SWELL1 leucine rich repeat containing 8 VRAC subunit A protein-coding chr4-169 chr4 690066 690298 + 21.4 0.000 Intergenic Intergenic -1031 NM_032219 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chr16-262 chr16 381121 381353 + 21.4 0.000 intron (NM_021259, intron 1 of 12) CpG 741 NM_021259 58986 Hs.288940 NM_021259 ENSG00000129925 TMEM8A GPI-PLA2|M83|PGAP6|TMEM6|TMEM8 transmembrane protein 8A protein-coding chr10-514 chr10 131997868 131998100 + 21.4 0.000 Intergenic Intergenic -15971 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chrX-287 chrX 137930240 137930472 + 21.4 0.000 Intergenic Intergenic 364229 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr1-640 chr1 52927282 52927514 + 21.4 0.000 exon (NM_001330587, exon 1 of 12) exon (NM_001330587, exon 1 of 12) 122 NM_002979 6342 Hs.476365 NM_002979 ENSG00000116171 SCP2 NLTP|NSL-TP|SCP-2|SCP-CHI|SCP-X|SCPX sterol carrier protein 2 protein-coding chr14-381 chr14 31084082 31084314 + 21.4 0.000 intron (NM_001254727, intron 6 of 6) intron (NM_001254727, intron 6 of 6) 57555 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr2-756 chr2 23351746 23351978 + 21.4 0.000 Intergenic Intergenic -33317 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chrX-128 chrX 71067426 71067658 + 21.4 0.000 intron (NM_001256188, intron 1 of 3) intron (NM_001256188, intron 1 of 3) 792 NM_013346 29934 Hs.260750 NM_013346 ENSG00000147164 SNX12 - sorting nexin 12 protein-coding chr17-424 chr17 64635702 64635934 + 21.4 0.000 intron (NM_022739, intron 1 of 18) L1MB7|LINE|L1 26489 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr1-1409 chr1 93721888 93722120 + 21.4 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) -40167 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr1-946 chr1 93693278 93693510 + 21.4 0.000 intron (NM_001261408, intron 3 of 13) intron (NM_001261408, intron 3 of 13) -11557 NM_003567 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr1-571 chr1 180913129 180913361 + 21.4 0.000 exon (NM_020950, exon 1 of 9) exon (NM_020950, exon 1 of 9) 348 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr3-96 chr3 195271505 195271737 + 21.4 0.000 promoter-TSS (NM_152531) promoter-TSS (NM_152531) -462 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr2-245 chr2 218217578 218217810 + 21.4 0.000 intron (NM_152862, intron 2 of 10) intron (NM_152862, intron 2 of 10) 297 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr14-145 chr14 50831536 50831768 + 21.4 0.000 promoter-TSS (NM_020921) promoter-TSS (NM_020921) -531 NM_020921 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr21-61 chr21 46060706 46060938 + 21.4 0.000 Intergenic Intergenic -37290 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr3-565 chr3 153042586 153042818 + 21.4 0.000 Intergenic AluSz|SINE|Alu -119524 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr15-249 chr15 41660478 41660710 + 21.4 0.000 intron (NM_001164273, intron 1 of 23) CpG 182 NM_001080541 23269 Hs.187569 NM_001080541 ENSG00000174197 MGA MAD5|MXD5 MAX dimerization protein MGA protein-coding chr16-641 chr16 67310216 67310448 + 21.4 0.000 intron (NM_001100915, intron 2 of 15) intron (NM_001100915, intron 2 of 15) 16409 NM_001100915 146212 Hs.299127 NM_001100915 ENSG00000168676 KCTD19 - potassium channel tetramerization domain containing 19 protein-coding chr2-464 chr2 100767158 100767390 + 21.4 0.000 Intergenic Intergenic -52865 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr4-309 chr4 182827713 182827945 + 21.4 0.000 Intergenic Intergenic 89424 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr3-574 chr3 170493220 170493452 + 21.4 0.000 intron (NM_020949, intron 4 of 7) intron (NM_020949, intron 4 of 7) 26051 NR_135556 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr11-649 chr11 121931868 121932100 + 21.4 0.000 Intergenic Intergenic 167860 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr5-231 chr5 163460016 163460248 + 21.4 0.000 promoter-TSS (NR_138426) promoter-TSS (NR_138426) -30 NM_001329991 134492 Hs.140443 NM_145266 ENSG00000170584 NUDCD2 NudCL2 NudC domain containing 2 protein-coding chr15-203 chr15 98548118 98548350 + 21.4 0.000 Intergenic CpG -33898 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding chr10-836 chr10 132944240 132944472 + 21.4 0.000 non-coding (NR_120626, exon 2 of 2) non-coding (NR_120626, exon 2 of 2) -1786 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr15-154 chr15 83010840 83011072 + 21.4 0.000 intron (NM_001160114, intron 1 of 3) L2c|LINE|L2 683 NM_001160115 123207 Hs.352541 NM_144597 ENSG00000169609 C15orf40 - chromosome 15 open reading frame 40 protein-coding chr15-142 chr15 40454909 40455141 + 21.4 0.000 intron (NR_125372, intron 1 of 4) intron (NR_125372, intron 1 of 4) 14072 NM_014952 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr3-814 chr3 104909095 104909327 + 21.4 0.000 Intergenic Intergenic -457502 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr4-538 chr4 38280086 38280318 + 21.4 0.000 Intergenic Intergenic -86712 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr10-721 chr10 84337189 84337421 + 21.2 0.000 intron (NM_018999, intron 1 of 10) L2a|LINE|L2 8716 NM_001351290 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr11-310 chr11 44221618 44221850 + 21.2 0.000 intron (NM_207122, intron 10 of 13) intron (NM_207122, intron 10 of 13) 88405 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr20-203 chr20 33391986 33392218 + 21.2 0.000 intron (NM_001365728, intron 5 of 14) intron (NM_001365728, intron 5 of 14) 9417 NM_016408 51654 Hs.435952 NM_016082 ENSG00000101391 CDK5RAP1 C20orf34|C42|CGI-05|HSPC167 CDK5 regulatory subunit associated protein 1 protein-coding chr4-372 chr4 122338498 122338730 + 21.2 0.000 intron (NM_015312, intron 69 of 83) MER8|DNA|TcMar-Tigger -40397 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding chr13-329 chr13 98419956 98420188 + 21.2 0.000 intron (NM_005766, intron 16 of 26) intron (NM_005766, intron 16 of 26) 102053 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr7-834 chr7 131147629 131147861 + 21.2 0.000 intron (NM_001145354, intron 2 of 18) MIR|SINE|MIR 37651 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr13-161 chr13 22098253 22098485 + 21.2 0.000 Intergenic Intergenic -111916 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr8-511 chr8 72436101 72436333 + 21.2 0.000 Intergenic L2|LINE|L2 -101008 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr6-470 chr6 154721589 154721821 + 21.2 0.000 Intergenic Intergenic -11673 NM_014892 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr7-483 chr7 47795355 47795587 + 21.2 0.000 intron (NR_161268, intron 1 of 2) THE1A|LTR|ERVL-MaLR 180 NR_161269 80099 Hs.287647 NM_025031 C7orf69 - chromosome 7 open reading frame 69 ncRNA chr1-687 chr1 199641410 199641642 + 21.2 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -386184 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr7-577 chr7 29784774 29785006 + 21.2 0.000 Intergenic HAL1|LINE|L1 -21664 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr5-434 chr5 127371447 127371679 + 21.2 0.000 intron (NM_001308121, intron 5 of 13) intron (NM_001308121, intron 5 of 13) 80767 NM_032446 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr1-1033 chr1 214281238 214281470 + 21.2 0.000 exon (NM_020197, exon 1 of 12) exon (NM_020197, exon 1 of 12) 195 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr6-219 chr6 67943432 67943664 + 21.2 0.000 Intergenic Intergenic -111803 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA chr3-920 chr3 191992324 191992556 + 21.2 0.000 Intergenic L1PBa1|LINE|L1 -246190 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr8-113 chr8 88327566 88327798 + 21.2 0.000 promoter-TSS (NM_005941) promoter-TSS (NM_005941) -199 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr5-376 chr5 17218898 17219130 + 21.2 0.000 intron (NM_006317, intron 1 of 1) intron (NM_006317, intron 1 of 1) 1383 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding chr20-265 chr20 34368498 34368730 + 21.2 0.000 intron (NM_001257137, intron 1 of 25) intron (NM_001257137, intron 1 of 25) 5341 NM_001324198 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr11-440 chr11 62880799 62881031 + 21.2 0.000 promoter-TSS (NR_037193) promoter-TSS (NR_037193) 19 NM_001013251 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr8-375 chr8 13530231 13530463 + 21.2 0.000 intron (NM_001348082, intron 1 of 16) intron (NM_001348082, intron 1 of 16) -15496 NM_024767 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr3-492 chr3 46558496 46558728 + 21.2 0.000 intron (NR_073385, intron 2 of 2) L1MEf|LINE|L1 1214 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr12-292 chr12 50075140 50075372 + 21.2 0.000 intron (NM_001256830, intron 1 of 9) intron (NM_001256830, intron 1 of 9) 1671 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr16-311 chr16 30075847 30076079 + 21.2 0.000 promoter-TSS (NM_001303504) promoter-TSS (NM_001303504) -31 NM_001303507 5531 Hs.534338 NM_002720 ENSG00000149923 PPP4C PP-X|PP4|PP4C|PPH3|PPP4|PPX protein phosphatase 4 catalytic subunit protein-coding chrX-139 chrX 101348442 101348674 + 21.2 0.000 TTS (NM_001287344) TTS (NM_001287344) 184 NM_004085 1678 Hs.447877 NM_004085 ENSG00000126953 TIMM8A DDP|DDP1|DFN1|MTS|TIM8 translocase of inner mitochondrial membrane 8A protein-coding chr13-242 chr13 112575835 112576067 + 21.2 0.000 intron (NM_006322, intron 1 of 21) MLT1D|LTR|ERVL-MaLR 12202 NM_001286278 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr16-196 chr16 89123509 89123741 + 21.2 0.000 intron (NR_104293, intron 7 of 10) intron (NR_104293, intron 7 of 10) -12923 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr2-287 chr2 219552445 219552677 + 21.2 0.000 exon (NM_015311, exon 18 of 21) exon (NM_015311, exon 18 of 21) -3414 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr9-512 chr9 18336614 18336846 + 21.2 0.000 Intergenic Intergenic -137423 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr11-801 chr11 27915491 27915723 + 21.2 0.000 Intergenic AluSx1|SINE|Alu -141208 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr15-193 chr15 83582386 83582618 + 21.2 0.000 intron (NM_001324185, intron 7 of 9) MER103C|DNA|hAT-Charlie -71621 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr17-330 chr17 74729573 74729805 + 21.2 0.000 intron (NM_175738, intron 2 of 8) LTR33|LTR|ERVL -6871 NM_001330471 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr1-680 chr1 179142942 179143174 + 21.2 0.000 promoter-TSS (NM_005158) promoter-TSS (NM_005158) 18 NM_005158 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr9-410 chr9 33707642 33707874 + 21.2 0.000 Intergenic MER41-int|LTR|ERV1 -30338 NR_023917 11191 Hs.493716 NR_023917 ENSG00000237984 PTENP1 PTEN-rs|PTEN2|PTENpg1|PTH2|psiPTEN phosphatase and tensin homolog pseudogene 1 pseudo chr22-167 chr22 39091721 39091953 + 21.2 0.000 Intergenic Intergenic -5387 NM_001166004 164668 Hs.440515 NM_181773 ENSG00000100298 APOBEC3H A3H|ARP-10|ARP10 apolipoprotein B mRNA editing enzyme catalytic subunit 3H protein-coding chr8-252 chr8 22668347 22668579 + 21.2 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) 658 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr1-1002 chr1 179169687 179169919 + 21.2 0.000 intron (NM_007314, intron 1 of 11) AluJr|SINE|Alu -26727 NM_001136000 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding chr7-108 chr7 44116324 44116556 + 21.2 0.000 exon (NM_001127218, exon 7 of 11) exon (NM_001127218, exon 7 of 11) 5591 NR_039792 100616346 NR_039792 ENSG00000284412 MIR4649 mir-4649 microRNA 4649 ncRNA chr11-583 chr11 62293554 62293786 + 21.2 0.000 Intergenic Intergenic 5405 NM_206998 404552 Hs.473247 NM_206998 ENSG00000197745 SCGB1D4 IIS secretoglobin family 1D member 4 protein-coding chr10-171 chr10 88880456 88880688 + 21.2 0.000 5' UTR (NM_020799, exon 1 of 11) 5' UTR (NM_020799, exon 1 of 11) 327 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr1-856 chr1 19419434 19419666 + 21.2 0.000 intron (NM_001206540, intron 2 of 9) intron (NM_001206540, intron 2 of 9) 64745 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr17-163 chr17 59406866 59407098 + 21.2 0.000 Intergenic Intergenic 40899 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chrX-122 chrX 64410983 64411215 + 21.2 0.000 Intergenic L1PA14|LINE|L1 -15647 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr7-302 chr7 118184153 118184385 + 21.2 0.000 intron (NM_016200, intron 1 of 3) CpG 105 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr3-482 chr3 33482619 33482851 + 21.2 0.000 Intergenic Intergenic -42330 NM_014517 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr3-146 chr3 129278601 129278833 + 21.2 0.000 promoter-TSS (NM_001370345) promoter-TSS (NM_001370345) -115 NM_001370345 56941 Hs.458320 NM_020187 ENSG00000183624 HMCES C3orf37|DC12|SRAPD1 5-hydroxymethylcytosine binding, ES cell specific protein-coding chr3-575 chr3 170997879 170998111 + 21.2 0.000 exon (NM_000340, exon 11 of 11) exon (NM_000340, exon 11 of 11) 28725 NM_001278658 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr17-452 chr17 82232282 82232514 + 21.2 0.000 intron (NM_001042423, intron 1 of 4) intron (NM_001042423, intron 1 of 4) 166 NM_001042423 9123 Hs.500761 NM_004207 ENSG00000141526 SLC16A3 MCT 3|MCT 4|MCT-3|MCT-4|MCT3|MCT4 solute carrier family 16 member 3 protein-coding chr22-352 chr22 45064452 45064684 + 21.2 0.000 Intergenic Intergenic -54563 NM_138415 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr17-431 chr17 70022181 70022413 + 21.2 0.000 Intergenic Intergenic -28974 NR_104129 101928141 Hs.639899 NR_104129 ENSG00000267603 LINC01028 TCONS_00025127 long intergenic non-protein coding RNA 1028 ncRNA chr15-145 chr15 56918337 56918569 + 21.2 0.000 promoter-TSS (NM_001322152) promoter-TSS (NM_001322152) 46 NR_015419 145783 Hs.620525 NR_015419 ENSG00000285331 LOC145783 - uncharacterized LOC145783 ncRNA chrX-20 chrX 48897696 48897928 + 21.0 0.000 promoter-TSS (NM_001032384) promoter-TSS (NM_001032384) -100 NM_001032382 10084 Hs.534384 NM_005710 ENSG00000102103 PQBP1 MRX2|MRX55|MRXS3|MRXS8|NPW38|RENS1|SHS polyglutamine binding protein 1 protein-coding chr12-323 chr12 120257247 120257479 + 21.0 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) -7200 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr14-421 chr14 71206870 71207102 + 21.0 0.000 Intergenic Intergenic -113490 NM_001354285 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr3-766 chr3 52445424 52445656 + 21.0 0.000 promoter-TSS (NM_020163) promoter-TSS (NM_020163) -437 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr9-124 chr9 127930628 127930860 + 21.0 0.000 promoter-TSS (NM_001135219) promoter-TSS (NM_001135219) 33 NM_001135219 138429 Hs.734928 NM_173492 ENSG00000167103 PIP5KL1 PIPKH phosphatidylinositol-4-phosphate 5-kinase like 1 protein-coding chr6-437 chr6 47648755 47648987 + 21.0 0.000 Intergenic Tigger2a|DNA|TcMar-Tigger -7601 NM_153839 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding chr4-643 chr4 146052078 146052310 + 21.0 0.000 Intergenic Intergenic 69719 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr18-197 chr18 23356892 23357124 + 21.0 0.000 intron (NR_134876, intron 7 of 10) MIRb|SINE|MIR 80953 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr5-176 chr5 169742732 169742964 + 21.0 0.000 intron (NR_156756, intron 22 of 52) intron (NR_156756, intron 22 of 52) 105573 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr5-313 chr5 172897593 172897825 + 21.0 0.000 intron (NM_001031711, intron 3 of 9) intron (NM_001031711, intron 3 of 9) -17374 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chrX-41 chrX 81121625 81121857 + 21.0 0.000 intron (NM_030763, intron 1 of 6) intron (NM_030763, intron 1 of 6) 80172 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr18-43 chr18 9709511 9709743 + 21.0 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 1326 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr3-566 chr3 156938080 156938312 + 21.0 0.000 intron (NM_001004316, intron 5 of 12) L1MD2|LINE|L1 111843 NM_001193283 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr19-826 chr19 36493220 36493452 + 21.0 0.000 Intergenic LTR13|LTR|ERVK 3709 NR_036504 728752 Hs.729762 NR_036504 ENSG00000267309 LOC728752 - uncharacterized LOC728752 ncRNA chr19-694 chr19 19163906 19164138 + 21.0 0.000 intron (NR_027308, intron 5 of 11) AluSq|SINE|Alu 6241 NM_001145785 100271849 Hs.153629 NM_001145785 ENSG00000213999 MEF2B RSRFR2 myocyte enhancer factor 2B protein-coding chr1-1551 chr1 205162540 205162772 + 21.0 0.000 intron (NM_199462, intron 5 of 11) intron (NM_199462, intron 5 of 11) -40678 NM_001193273 5929 Hs.519230 NM_005057 ENSG00000117222 RBBP5 RBQ3|SWD1 RB binding protein 5, histone lysine methyltransferase complex subunit protein-coding chr4-536 chr4 36655162 36655394 + 21.0 0.000 Intergenic MSTA|LTR|ERVL-MaLR -13378 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA chr10-515 chr10 132101696 132101928 + 21.0 0.000 intron (NM_001323086, intron 1 of 23) MLT1F-int|LTR|ERVL-MaLR 35866 NM_001323089 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr16-438 chr16 54193777 54194009 + 21.0 0.000 Intergenic Intergenic 76986 NR_126340 100996338 Hs.232014 NR_126340 LINC02169 - long intergenic non-protein coding RNA 2169 ncRNA chr15-451 chr15 83872155 83872387 + 21.0 0.000 intron (NM_207517, intron 9 of 29) MER102c|DNA|hAT-Charlie -207916 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr16-473 chr16 86457683 86457915 + 21.0 0.000 Intergenic Intergenic 51061 NR_033925 400550 Hs.448825 NR_033925 ENSG00000268388 FENDRR FOXF1-AS1|FOXF1AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21 FOXF1 adjacent non-coding developmental regulatory RNA ncRNA chr2-671 chr2 144938163 144938395 + 21.0 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 270312 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr1-1128 chr1 85570435 85570667 + 21.0 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 7649 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-110 chr2 217936452 217936684 + 21.0 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) 7502 NM_022648 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr11-967 chr11 119340286 119340518 + 21.0 0.000 5' UTR (NM_001278431, exon 2 of 3) 5' UTR (NM_001278431, exon 2 of 3) 481 NM_001278431 114902 Hs.632102 NM_015645 ENSG00000223953 C1QTNF5 CTRP5|MFRP C1q and TNF related 5 protein-coding chr2-711 chr2 205801881 205802113 + 21.0 0.000 Intergenic Intergenic 119496 NM_201267 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr8-548 chr8 110697716 110697948 + 21.0 0.000 Intergenic AluJr|SINE|Alu 329601 NR_125417 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA chr4-402 chr4 182973694 182973926 + 21.0 0.000 Intergenic L2a|LINE|L2 -56333 NM_001351753 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr17-735 chr17 16584376 16584608 + 21.0 0.000 Intergenic CpG -15280 NM_001346169 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr11-971 chr11 121024030 121024262 + 21.0 0.000 promoter-TSS (NM_001130047) promoter-TSS (NM_001130047) 74 NM_001130047 219899 Hs.504136 NM_152715 ENSG00000154114 TBCEL El|LRRC35 tubulin folding cofactor E like protein-coding chr14-164 chr14 55129685 55129917 + 21.0 0.000 intron (NM_002306, intron 1 of 5) CpG 549 NM_001357678 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr6-256 chr6 166566323 166566555 + 21.0 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -21749 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr4-246 chr4 49709509 49709741 + 21.0 0.000 Intergenic SAR|Satellite|Satellite 722983 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr12-147 chr12 22624945 22625177 + 21.0 0.000 promoter-TSS (NR_135030) promoter-TSS (NR_135030) -15 NR_135031 105369691 Hs.556287 NR_135030 LOC105369691 - uncharacterized LOC105369691 ncRNA chr15-482 chr15 100251310 100251542 + 21.0 0.000 intron (NM_139057, intron 7 of 21) MLT1B|LTR|ERVL-MaLR 90549 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr2-1035 chr2 140076200 140076432 + 21.0 0.000 Intergenic Intergenic 510369 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr1-1542 chr1 202562502 202562734 + 21.0 0.000 intron (NM_002481, intron 19 of 23) intron (NM_002481, intron 19 of 23) 22504 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr2-427 chr2 11529541 11529773 + 21.0 0.000 Intergenic L1ME3E|LINE|L1 -4388 NM_014668 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr21-73 chr21 45555996 45556228 + 21.0 0.000 intron (NM_001352511, intron 1 of 5) CpG 6913 NM_001352511 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr9-421 chr9 37632272 37632504 + 21.0 0.000 intron (NM_001371224, intron 2 of 16) MLT1K|LTR|ERVL-MaLR -18566 NM_014907 22844 Hs.163990 NM_014907 ENSG00000070601 FRMPD1 FRMD2 FERM and PDZ domain containing 1 protein-coding chr15-186 chr15 75347879 75348111 + 21.0 0.000 non-coding (NR_046311, exon 1 of 11) non-coding (NR_046311, exon 1 of 11) 160 NR_046311 79661 Hs.512732 NM_024608 ENSG00000140398 NEIL1 FPG1|NEI1|hFPG1 nei like DNA glycosylase 1 protein-coding chr1-369 chr1 154961523 154961755 + 21.0 0.000 TTS (NM_001130040) TTS (NM_001130040) 143 NM_138300 90780 Hs.533597 NM_138300 ENSG00000163348 PYGO2 1190004M21Rik pygopus family PHD finger 2 protein-coding chr10-730 chr10 88087122 88087354 + 21.0 0.000 Intergenic L2a|LINE|L2 223613 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr2-583 chr2 25000432 25000664 + 21.0 0.000 intron (NR_034113, intron 1 of 2) intron (NR_034113, intron 1 of 2) 28436 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr2-912 chr2 33829912 33830144 + 21.0 0.000 intron (NR_126403, intron 1 of 5) intron (NR_126403, intron 1 of 5) -101811 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo chr22-382 chr22 31444065 31444297 + 21.0 0.000 intron (NM_001164502, intron 13 of 16) intron (NM_001164502, intron 13 of 16) 44577 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chrY-3 chrY 11294824 11295056 + 21.0 0.000 Intergenic Intergenic 1126650 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr19-467 chr19 10315665 10315897 + 21.0 0.000 TTS (NM_133452) TTS (NM_133452) 234 NM_001031734 112812 Hs.654865 NM_080665 ENSG00000267673 FDX2 FDX1L|MEOAL ferredoxin 2 protein-coding chr4-384 chr4 147741378 147741610 + 21.0 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 9406 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr13-305 chr13 64929264 64929496 + 21.0 0.000 Intergenic ERVL-B4-int|LTR|ERVL -853369 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr17-724 chr17 8041235 8041467 + 21.0 0.000 intron (NM_001039130, intron 3 of 12) MIRc|SINE|MIR 2292 NM_001039131 247 Hs.111256 NM_001141 ENSG00000179593 ALOX15B 15-LOX-2 arachidonate 15-lipoxygenase type B protein-coding chr9-377 chr9 129405711 129405943 + 21.0 0.000 Intergenic L2a|LINE|L2 68904 NR_120685 100506119 Hs.624047 NR_120685 ENSG00000233901 LINC01503 - long intergenic non-protein coding RNA 1503 ncRNA chr22-168 chr22 41288282 41288514 + 21.0 0.000 intron (NM_001317930, intron 1 of 15) intron (NM_001317930, intron 1 of 15) -2211 NM_001278651 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr10-307 chr10 18627625 18627857 + 21.0 0.000 intron (NM_001351118, intron 1 of 8) L1PA3|LINE|L1 23846 NM_001351115 221078 Hs.396175 NM_182543 ENSG00000241058 NSUN6 4933414E04Rik|ARL5B-AS1|NOPD1 NOP2/Sun RNA methyltransferase 6 protein-coding chr5-583 chr5 31486340 31486572 + 21.0 0.000 intron (NM_013235, intron 13 of 34) intron (NM_013235, intron 13 of 34) 45637 NM_001100412 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr20-138 chr20 35087833 35088065 + 21.0 0.000 intron (NM_199368, intron 1 of 18) L2|LINE|L2 4858 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr1-406 chr1 39901567 39901799 + 21.0 0.000 5' UTR (NM_001033081, exon 1 of 2) 5' UTR (NM_001033081, exon 1 of 2) 234 NM_001033082 4610 Hs.437922 NM_005376 ENSG00000116990 MYCL L-Myc|LMYC|MYCL1|bHLHe38 MYCL proto-oncogene, bHLH transcription factor protein-coding chr1-1246 chr1 11731596 11731828 + 21.0 0.000 Intergenic MER47A|DNA|TcMar-Tigger -4373 NM_001040196 57085 Hs.464438 NM_020350 ENSG00000177674 AGTRAP ATRAP angiotensin II receptor associated protein protein-coding chr4-421 chr4 22803893 22804125 + 21.0 0.000 intron (NR_102357, intron 4 of 4) intron (NR_102357, intron 4 of 4) 89920 NM_001277225 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr2-421 chr2 1731954 1732186 + 21.0 0.000 intron (NM_012293, intron 1 of 22) L1MEc|LINE|L1 12445 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr3-608 chr3 20048489 20048721 + 21.0 0.000 intron (NM_003884, intron 1 of 17) intron (NM_003884, intron 1 of 17) 8159 NM_003884 8850 Hs.533055 NM_003884 ENSG00000114166 KAT2B CAF|P/CAF|PCAF lysine acetyltransferase 2B protein-coding chr7-334 chr7 131633442 131633674 + 21.0 0.000 Intergenic Intergenic -76930 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr14-347 chr14 50320521 50320753 + 21.0 0.000 intron (NM_001370605, intron 2 of 5) intron (NM_001370605, intron 2 of 5) 8313 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr6-196 chr6 7827259 7827491 + 21.0 0.000 intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 82702 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr3-587 chr3 194692028 194692260 + 20.8 0.000 Intergenic Intergenic 6261 NM_153690 131583 Hs.435080 NM_153690 ENSG00000185112 FAM43A - family with sequence similarity 43 member A protein-coding chr11-417 chr11 7577957 7578189 + 20.8 0.000 5' UTR (NM_001351860, exon 1 of 22) 5' UTR (NM_001351860, exon 1 of 22) 182 NM_001351860 8495 Hs.655714 NM_003621 ENSG00000166387 PPFIBP2 Cclp1 PPFIA binding protein 2 protein-coding chr4-563 chr4 71181305 71181537 + 20.8 0.000 Intergenic L1ME4b|LINE|L1 -5838 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr5-230 chr5 160165199 160165431 + 20.8 0.000 Intergenic Intergenic -22066 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr2-334 chr2 96353633 96353865 + 20.8 0.000 intron (NM_001281712, intron 7 of 16) intron (NM_001281712, intron 7 of 16) 17983 NM_001281711 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr1-371 chr1 156728648 156728880 + 20.8 0.000 promoter-TSS (NM_001303095) promoter-TSS (NM_001303095) 2 NM_001370151 81875 Hs.301904 NM_030980 ENSG00000143319 ISG20L2 HSD38 interferon stimulated exonuclease gene 20 like 2 protein-coding chr4-357 chr4 79721109 79721341 + 20.8 0.000 Intergenic Intergenic -106246 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA chr1-947 chr1 94743996 94744228 + 20.8 0.000 intron (NR_160781, intron 1 of 4) intron (NR_160781, intron 1 of 4) 1788 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr12-298 chr12 54421471 54421703 + 20.8 0.000 intron (NR_120488, intron 1 of 2) intron (NR_120488, intron 1 of 2) 1802 NR_120488 102724050 Hs.670941 NR_120486 ENSG00000258137 LOC102724050 - uncharacterized LOC102724050 ncRNA chr14-116 chr14 103096811 103097043 + 20.8 0.000 Intergenic Intergenic -3217 NM_001077594 91828 Hs.37712 NM_001077594 ENSG00000205436 EXOC3L4 C14orf73 exocyst complex component 3 like 4 protein-coding chr3-572 chr3 167961529 167961761 + 20.8 0.000 Intergenic HAL1|LINE|L1 65697 NR_033843 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo chr2-701 chr2 197916087 197916319 + 20.8 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 111610 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr10-561 chr10 79925921 79926153 + 20.8 0.000 intron (NR_033857, intron 5 of 5) intron (NR_033857, intron 5 of 5) 5859 NR_002724 8512 Hs.733579 NR_002724 ENSG00000242600 MBL1P COLEC3P|MBL1P1 mannose binding lectin 1, pseudogene pseudo chr3-581 chr3 183449508 183449740 + 20.8 0.000 intron (NR_038301, intron 1 of 3) LTR16A2|LTR|ERVL 1973 NR_038301 100505687 Hs.551751 NR_038301 ENSG00000240024 LINC00888 - long intergenic non-protein coding RNA 888 ncRNA chrX-63 chrX 96684546 96684778 + 20.8 0.000 promoter-TSS (NM_006729) promoter-TSS (NM_006729) -1 NM_007309 1730 Hs.226483 NM_006729 ENSG00000147202 DIAPH2 DIA|DIA2|DRF2|POF|POF2|POF2A diaphanous related formin 2 protein-coding chr1-631 chr1 39701099 39701331 + 20.8 0.000 Intergenic LTR46|LTR|ERV1 -9730 NM_001282397 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr17-200 chr17 28371316 28371548 + 20.8 0.000 promoter-TSS (NM_015077) promoter-TSS (NM_015077) -262 NM_015077 23098 Hs.743510 NM_015077 ENSG00000004139 SARM1 MyD88-5|SAMD2|SARM sterile alpha and TIR motif containing 1 protein-coding chr15-90 chr15 74540918 74541150 + 20.8 0.000 promoter-TSS (NM_006465) promoter-TSS (NM_006465) -143 NM_001307939 10620 Hs.647642 NM_006465 ENSG00000179361 ARID3B BDP|DRIL2 AT-rich interaction domain 3B protein-coding chr9-425 chr9 76557635 76557867 + 20.8 0.000 Intergenic MER63A|DNA|hAT-Blackjack 57118 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chrX-266 chrX 112161400 112161632 + 20.8 0.000 intron (NM_001004308, intron 2 of 2) MamTip2|DNA|hAT-Tip100 78491 NM_001004308 340595 Hs.368140 NM_001004308 ENSG00000187823 RTL4 Mar4|Mart4|SIRH11|ZCCHC16 retrotransposon Gag like 4 protein-coding chr7-562 chr7 151138558 151138790 + 20.8 0.000 intron (NM_001350103, intron 13 of 18) intron (NM_001350103, intron 13 of 18) 24036 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr4-141 chr4 183173997 183174229 + 20.8 0.000 intron (NM_024949, intron 1 of 22) HAL1|LINE|L1 66521 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr22-370 chr22 26428678 26428910 + 20.8 0.000 promoter-TSS (NM_020437) promoter-TSS (NM_020437) -466 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chr8-421 chr8 135457139 135457371 + 20.8 0.000 promoter-TSS (NM_006558) promoter-TSS (NM_006558) -201 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr10-826 chr10 130186919 130187151 + 20.8 0.000 Intergenic Intergenic 50626 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr10-282 chr10 68833919 68834151 + 20.8 0.000 intron (NM_152709, intron 1 of 3) intron (NM_152709, intron 1 of 3) 6498 NM_001130160 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr14-77 chr14 77638787 77639019 + 20.8 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -22136 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr2-205 chr2 39120914 39121146 + 20.8 0.000 promoter-TSS (NM_005633) promoter-TSS (NM_005633) -567 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr22-380 chr22 30969046 30969278 + 20.8 0.000 promoter-TSS (NR_152867) promoter-TSS (NR_152867) -49 NR_152869 55000 Hs.554829 NR_002323 ENSG00000253352 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 ncRNA chrX-289 chrX 143266088 143266320 + 20.8 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 240276 NM_001009613 441525 Hs.535082 NM_001009613 ENSG00000189326 SPANXN4 CT11.9 SPANX family member N4 protein-coding chr1-1593 chr1 226478550 226478782 + 20.8 0.000 Intergenic LTR45C|LTR|ERV1 -70098 NM_001003665 375057 Hs.116827 NM_001003665 ENSG00000203685 STUM C1orf95 stum, mechanosensory transduction mediator homolog protein-coding chr19-430 chr19 5828415 5828647 + 20.8 0.000 TTS (NM_004558) TTS (NM_004558) 4729 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr20-312 chr20 8756435 8756667 + 20.8 0.000 intron (NM_182734, intron 23 of 32) MLT1H2|LTR|ERVL-MaLR -74634 NR_004386 26767 NR_004386 ENSG00000201348 RNU105B 105B|E1-2 RNA, U105B small nucleolar snoRNA chr2-322 chr2 68936570 68936802 + 20.8 0.000 Intergenic Intergenic 16207 NM_182536 200504 Hs.16757 NM_182536 ENSG00000183607 GKN2 BRICD1B|GDDR|PRO813|TFIZ1|VLTI465 gastrokine 2 protein-coding chr1-362 chr1 85578585 85578817 + 20.8 0.000 promoter-TSS (NM_001134445) promoter-TSS (NM_001134445) -501 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-68 chr2 65228278 65228510 + 20.8 0.000 intron (NM_001005386, intron 1 of 9) intron (NM_001005386, intron 1 of 9) 699 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr2-224 chr2 63699042 63699274 + 20.8 0.000 Intergenic Intergenic 110007 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chrX-117 chrX 47674541 47674773 + 20.8 0.000 Intergenic L1M1|LINE|L1 -15477 NM_004182 8409 Hs.172791 NM_004182 ENSG00000126756 UXT ART-27|STAP1 ubiquitously expressed prefoldin like chaperone protein-coding chr10-329 chr10 75192262 75192494 + 20.8 0.000 Intergenic Intergenic -17776 NM_001324090 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr11-577 chr11 58788287 58788519 + 20.8 0.000 Intergenic L1PA15-16|LINE|L1 56301 NM_145016 219970 Hs.254271 NM_145016 ENSG00000156689 GLYATL2 BXMAS2-10|GATF-B glycine-N-acyltransferase like 2 protein-coding chr6-349 chr6 53328822 53329054 + 20.8 0.000 intron (NM_001242830, intron 1 of 6) intron (NM_001242830, intron 1 of 6) 8679 NR_046241 647190 Hs.520189 NR_046241 RPS16P5 RPS16_3_702 ribosomal protein S16 pseudogene 5 pseudo chr5-464 chr5 160934501 160934733 + 20.8 0.000 intron (NR_027111, intron 2 of 2) HERVL18-int|LTR|ERVL 4009 NR_151858 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr7-697 chr7 36625256 36625488 + 20.8 0.000 intron (NM_001177507, intron 5 of 19) MIR|SINE|MIR -25252 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr10-185 chr10 41874250 41874482 + 20.8 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 493679 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr2-628 chr2 69464622 69464854 + 20.8 0.000 3' UTR (NM_014911, exon 22 of 22) 3' UTR (NM_014911, exon 22 of 22) -27110 NM_001002756 27247 Hs.430439 NM_015700 ENSG00000169599 NFU1 CGI-33|HIRIP|HIRIP5|MMDS1|NIFUC|Nfu|NifU NFU1 iron-sulfur cluster scaffold protein-coding chr7-366 chr7 47724765 47724997 + 20.8 0.000 Intergenic Intergenic -36595 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr14-272 chr14 48973166 48973398 + 20.8 0.000 Intergenic L1MEf|LINE|L1 613098 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr1-716 chr1 247104224 247104456 + 20.8 0.000 promoter-TSS (NM_024804) promoter-TSS (NM_024804) 32 NM_024804 79862 Hs.163754 NM_024804 ENSG00000188295 ZNF669 - zinc finger protein 669 protein-coding chr2-436 chr2 28958799 28959031 + 20.8 0.000 Intergenic Intergenic -22383 NM_199280 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr13-81 chr13 100673687 100673919 + 20.8 0.000 intron (NM_032813, intron 1 of 18) intron (NM_032813, intron 1 of 18) 992 NM_001350577 84899 Hs.190983 NM_032813 ENSG00000125247 TMTC4 - transmembrane O-mannosyltransferase targeting cadherins 4 protein-coding chr1-956 chr1 110696848 110697080 + 20.8 0.000 Intergenic L2c|LINE|L2 -22024 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding chr12-569 chr12 1635931 1636163 + 20.6 0.000 intron (NM_032642, intron 3 of 4) intron (NM_032642, intron 3 of 4) 6816 NM_032642 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chrX-60 chrX 9867747 9867979 + 20.6 0.000 intron (NM_001649, intron 1 of 9) intron (NM_001649, intron 1 of 9) -44509 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr2-196 chr2 230712590 230712822 + 20.6 0.000 promoter-TSS (NM_001130849) promoter-TSS (NM_001130849) -136 NM_016289 51719 Hs.603930 NM_016289 ENSG00000135932 CAB39 CGI-66|MO25 calcium binding protein 39 protein-coding chr15-352 chr15 27068221 27068453 + 20.6 0.000 intron (NM_001270873, intron 3 of 5) LTR41|LTR|ERVL 92982 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr3-460 chr3 184417853 184418085 + 20.6 0.000 intron (NR_161198, intron 1 of 2) intron (NR_161198, intron 1 of 2) 16432 NR_161199 105374250 Hs.129464 NR_161198 LINC02054 - long intergenic non-protein coding RNA 2054 ncRNA chr2-706 chr2 202064296 202064528 + 20.6 0.000 Intergenic Intergenic -8843 NM_001367720 100652824 Hs.686898 NM_001080445 ENSG00000182329 KIAA2012 - KIAA2012 protein-coding chr7-434 chr7 100889146 100889378 + 20.6 0.000 TTS (NM_001367915) TTS (NM_001367915) 453 NM_001015072 402682 Hs.534845 NM_001015072 ENSG00000176125 UFSP1 UFSP UFM1 specific peptidase 1 (inactive) protein-coding chr6-506 chr6 17775226 17775458 + 20.6 0.000 intron (NM_001105567, intron 33 of 36) L1ME3C|LINE|L1 68299 NR_134618 105374952 Hs.718703 NR_134616 ENSG00000272269 LOC105374952 - uncharacterized LOC105374952 ncRNA chr22-193 chr22 19177772 19178004 + 20.6 0.000 intron (NM_001256534, intron 2 of 7) CpG-18745 617 NM_001256534 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr1-941 chr1 85465298 85465530 + 20.6 0.000 promoter-TSS (NM_012137) promoter-TSS (NM_012137) -255 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr4-586 chr4 90316543 90316775 + 20.6 0.000 intron (NM_207491, intron 3 of 7) intron (NM_207491, intron 3 of 7) 81628 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr1-745 chr1 36107357 36107589 + 20.6 0.000 intron (NM_005202, intron 2 of 3) intron (NM_005202, intron 2 of 3) 17749 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr11-466 chr11 85647735 85647967 + 20.6 0.000 promoter-TSS (NM_032273) promoter-TSS (NM_032273) -68 NM_001244735 84233 Hs.533725 NM_032273 ENSG00000171202 TMEM126A OPA7 transmembrane protein 126A protein-coding chr17-464 chr17 16287631 16287863 + 20.6 0.000 intron (NM_004278, intron 2 of 6) L3|LINE|CR1 5733 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr6-594 chr6 130162699 130162931 + 20.6 0.000 intron (NM_001277185, intron 7 of 10) intron (NM_001277185, intron 7 of 10) 53070 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr22-417 chr22 42770044 42770276 + 20.6 0.000 Intergenic CpG -48859 NM_001318038 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr14-100 chr14 81220998 81221230 + 20.6 0.000 promoter-TSS (NR_135252) promoter-TSS (NR_135252) -104 NR_135252 101928504 Hs.510068 NR_135252 LOC101928504 - uncharacterized LOC101928504 ncRNA chr12-464 chr12 113635231 113635463 + 20.6 0.000 Intergenic Intergenic 138336 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr14-477 chr14 103707431 103707663 + 20.6 0.000 intron (NM_001371232, intron 5 of 9) intron (NM_001371232, intron 5 of 9) 7904 NM_001371232 chr12-711 chr12 110023067 110023299 + 20.6 0.000 intron (NM_033121, intron 6 of 14) intron (NM_033121, intron 6 of 14) 23753 NM_033121 88455 Hs.528703 NM_033121 ENSG00000076513 ANKRD13A ANKRD13|NY-REN-25 ankyrin repeat domain 13A protein-coding chr8-515 chr8 81570385 81570617 + 20.6 0.000 Intergenic MER52D|LTR|ERV1 -39111 NM_001105281 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding chr12-588 chr12 19575428 19575660 + 20.6 0.000 Intergenic Tigger16b|DNA|TcMar-Tigger 134945 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr22-330 chr22 26553135 26553367 + 20.6 0.000 intron (NM_001362923, intron 1 of 7) intron (NM_001362923, intron 1 of 7) 2072 NR_031615 100313914 NR_031615 ENSG00000221760 MIR548J MIRN548J|hsa-mir-548j microRNA 548j ncRNA chr12-673 chr12 80551968 80552200 + 20.6 0.000 intron (NM_001145026, intron 25 of 44) MER5A|DNA|hAT-Charlie 107849 NM_001145026 374462 Hs.539284 NM_001145026 ENSG00000139304 PTPRQ DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q protein tyrosine phosphatase receptor type Q protein-coding chr14-410 chr14 63484709 63484941 + 20.6 0.000 intron (NM_001354926, intron 2 of 2) intron (NM_001354926, intron 2 of 2) 23413 NM_001282182 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr4-269 chr4 145733314 145733546 + 20.6 0.000 TTS (NM_001080531) TTS (NM_001080531) 53226 NM_001080531 646603 NM_001080531 ENSG00000237136 C4orf51 - chromosome 4 open reading frame 51 protein-coding chr12-425 chr12 52149649 52149881 + 20.6 0.000 Intergenic Intergenic 42249 NM_182507 144501 Hs.140978 NM_182507 ENSG00000167767 KRT80 KB20 keratin 80 protein-coding chr6-148 chr6 34792860 34793092 + 20.6 0.000 intron (NM_017754, intron 1 of 20) intron (NM_017754, intron 1 of 20) 893 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr14-374 chr14 20731192 20731424 + 20.6 0.000 Intergenic Intergenic -14579 NM_006683 10876 Hs.304757 NM_006683 ENSG00000181562 EDDM3A EP3A|FAM12A|HE3-ALPHA|HE3A|HE3ALPHA|RAM1 epididymal protein 3A protein-coding chr9-511 chr9 17063135 17063367 + 20.6 0.000 Intergenic Intergenic -71789 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr13-356 chr13 114148386 114148618 + 20.6 0.000 Intergenic Intergenic -15879 NM_001320821 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr12-319 chr12 114684845 114685077 + 20.6 0.000 promoter-TSS (NM_005996) promoter-TSS (NM_005996) -786 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr7-578 chr7 32998451 32998683 + 20.6 0.000 intron (NM_007270, intron 7 of 9) intron (NM_007270, intron 7 of 9) 19093 NM_001284343 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr20-130 chr20 5950506 5950738 + 20.6 0.000 promoter-TSS (NM_001281520) promoter-TSS (NM_001281520) -30 NM_182802 84515 Hs.597484 NM_032485 ENSG00000125885 MCM8 C20orf154|POF10|dJ967N21.5 minichromosome maintenance 8 homologous recombination repair factor protein-coding chr3-738 chr3 37176275 37176507 + 20.6 0.000 promoter-TSS (NM_001348304) promoter-TSS (NM_001348304) -31 NM_001348302 9209 Hs.740522 NM_006309 ENSG00000093167 LRRFIP2 HUFI-2 LRR binding FLII interacting protein 2 protein-coding chr6-240 chr6 129948997 129949229 + 20.6 0.000 Intergenic Intergenic -69256 NM_032438 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr3-676 chr3 178097585 178097817 + 20.6 0.000 Intergenic Intergenic 280836 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr7-529 chr7 111803273 111803505 + 20.6 0.000 intron (NM_001363540, intron 30 of 52) intron (NM_001363540, intron 30 of 52) -5116 NR_103806 100506413 Hs.677513 NR_103806 ENSG00000225572 DOCK4-AS1 - DOCK4 antisense RNA 1 ncRNA chr16-388 chr16 400523 400755 + 20.6 0.000 3' UTR (NM_001286436, exon 5 of 5) 3' UTR (NM_001286436, exon 5 of 5) -1246 NM_020664 26063 Hs.628831 NM_020664 ENSG00000242612 DECR2 PDCR|SDR17C1 2,4-dienoyl-CoA reductase 2 protein-coding chr1-759 chr1 60281457 60281689 + 20.6 0.000 Intergenic Intergenic -207803 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr6-294 chr6 134168822 134169054 + 20.6 0.000 TTS (NM_001143676) TTS (NM_001143676) 5928 NM_001291995 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr7-386 chr7 103344649 103344881 + 20.6 0.000 promoter-TSS (NM_014377) promoter-TSS (NM_014377) 2 NM_014377 27000 Hs.558476 NM_014377 ENSG00000105821 DNAJC2 MPHOSPH11|MPP11|ZRF1|ZUO1 DnaJ heat shock protein family (Hsp40) member C2 protein-coding chr17-264 chr17 2084935 2085167 + 20.6 0.000 intron (NM_001256827, intron 7 of 11) intron (NM_001256827, intron 7 of 11) 3710 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr20-142 chr20 37503790 37504022 + 20.6 0.000 Intergenic L2b|LINE|L2 16397 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr5-572 chr5 14420242 14420474 + 20.6 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -43625 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr15-148 chr15 67125706 67125938 + 20.6 0.000 5' UTR (NM_001145102, exon 1 of 9) 5' UTR (NM_001145102, exon 1 of 9) 106 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr1-991 chr1 162822599 162822831 + 20.6 0.000 Intergenic CpG 32013 NM_001304512 51478 Hs.492925 NM_016371 ENSG00000132196 HSD17B7 PRAP|SDR37C1 hydroxysteroid 17-beta dehydrogenase 7 protein-coding chr1-1087 chr1 18954583 18954815 + 20.6 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 1977 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chrX-56 chrX 123878977 123879209 + 20.6 0.000 intron (NR_037916, intron 1 of 5) intron (NR_037916, intron 1 of 5) 18926 NR_037916 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr3-854 chr3 141878479 141878711 + 20.6 0.000 intron (NM_001679, intron 1 of 6) intron (NM_001679, intron 1 of 6) 1952 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr11-770 chr11 5441689 5441921 + 20.6 0.000 promoter-TSS (NM_001005288) promoter-TSS (NM_001005288) -252 NM_001005288 390063 Hs.553732 NM_001005288 ENSG00000167359 OR51I1 - olfactory receptor family 51 subfamily I member 1 protein-coding chr17-802 chr17 49816698 49816930 + 20.6 0.000 intron (NM_007067, intron 8 of 14) intron (NM_007067, intron 8 of 14) 28133 NM_001199156 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding chr19-888 chr19 58496787 58497019 + 20.6 0.000 Intergenic Intergenic 15089 NM_012254 10998 Hs.292177 NM_012254 ENSG00000083807 SLC27A5 ACSB|ACSVL6|BACS|BAL|FACVL3|FATP-5|FATP5|VLACSR|VLCS-H2|VLCSH2 solute carrier family 27 member 5 protein-coding chr5-79 chr5 172767522 172767754 + 20.6 0.000 TTS (NM_004417) TTS (NM_004417) 3557 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr1-1165 chr1 169086325 169086557 + 20.6 0.000 intron (NR_104091, intron 1 of 4) intron (NR_104091, intron 1 of 4) 564 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr3-410 chr3 187955003 187955235 + 20.6 0.000 Intergenic Intergenic 21288 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr17-576 chr17 63694471 63694703 + 20.6 0.000 3' UTR (NM_001363768, exon 17 of 17) 3' UTR (NM_001363768, exon 17 of 17) 5538 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr8-570 chr8 125474776 125475008 + 20.6 0.000 Intergenic MIR|SINE|MIR 42683 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr6-114 chr6 33661969 33662201 + 20.6 0.000 intron (NM_002224, intron 7 of 57) intron (NM_002224, intron 7 of 57) -28340 NR_134628 101929188 Hs.658327 NR_134628 LOC101929188 - uncharacterized LOC101929188 ncRNA chr4-264 chr4 123481230 123481462 + 20.6 0.000 Intergenic Intergenic 81806 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr2-860 chr2 235274038 235274270 + 20.6 0.000 Intergenic MLT2B4|LTR|ERVL -219889 NM_014914 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr16-285 chr16 85816598 85816830 + 20.6 0.000 Intergenic AluY|SINE|Alu 17019 NM_001318797 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr19-490 chr19 43464151 43464383 + 20.6 0.000 intron (NM_014400, intron 2 of 4) CpG-14618 1341 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr2-222 chr2 59939625 59939857 + 20.6 0.000 Intergenic Intergenic 443295 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA chr5-545 chr5 172107501 172107733 + 20.6 0.000 intron (NM_005990, intron 5 of 18) MIR|SINE|MIR 80607 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr22-338 chr22 32708802 32709034 + 20.6 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -91898 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr5-410 chr5 77188789 77189021 + 20.6 0.000 intron (NM_001349752, intron 1 of 21) intron (NM_001349752, intron 1 of 21) 8601 NM_001349750 8622 Hs.584830 NM_003719 ENSG00000113231 PDE8B ADSD|PPNAD3 phosphodiesterase 8B protein-coding chr17-757 chr17 28808292 28808524 + 20.6 0.000 intron (NM_001288635, intron 1 of 3) intron (NM_001288635, intron 1 of 3) 4063 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr1-358 chr1 66944622 66944854 + 20.4 0.000 intron (NM_001350530, intron 5 of 15) AluJb|SINE|Alu 14482 NM_001077704 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr2-76 chr2 28751534 28751766 + 20.4 0.000 promoter-TSS (NM_002709) promoter-TSS (NM_002709) -98 NM_206876 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding GL000225.1-6 GL000225.1 14384 14616 + 20.4 0.000 NA NA NA NA chr2-787 chr2 85440939 85441171 + 20.4 0.000 Intergenic L1PA13|LINE|L1 22124 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr16-503 chr16 20314082 20314314 + 20.4 0.000 intron (NM_001007240, intron 11 of 11) L1PA11|LINE|L1 13315 NM_001007240 2813 Hs.53985 NM_001502 ENSG00000169347 GP2 ZAP75 glycoprotein 2 protein-coding chr14-305 chr14 75176859 75177091 + 20.4 0.000 promoter-TSS (NM_006827) promoter-TSS (NM_006827) -363 NM_006827 10972 Hs.74137 NM_006827 ENSG00000170348 TMED10 P24(DELTA)|S31I125|S31III125|TMP21|Tmp-21-I|p23|p24d1 transmembrane p24 trafficking protein 10 protein-coding chr17-621 chr17 9108375 9108607 + 20.4 0.000 intron (NM_004822, intron 2 of 6) intron (NM_004822, intron 2 of 6) 70627 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr11-504 chr11 63460030 63460262 + 20.4 0.000 Intergenic L1PA8|LINE|L1 31021 NM_001146728 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding chr7-359 chr7 42097891 42098123 + 20.4 0.000 intron (NM_000168, intron 3 of 14) MIRb|SINE|MIR 139202 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr12-440 chr12 79480525 79480757 + 20.4 0.000 Intergenic SATR2|Satellite|Satellite 61384 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr22-424 chr22 44731217 44731449 + 20.4 0.000 intron (NM_181334, intron 4 of 14) intron (NM_181334, intron 4 of 14) -21225 NM_001017526 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr12-314 chr12 105109234 105109466 + 20.4 0.000 intron (NM_001293640, intron 1 of 32) L2c|LINE|L2 1619 NM_015275 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr15-472 chr15 92831459 92831691 + 20.4 0.000 Intergenic Intergenic 36091 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr2-209 chr2 85132959 85133191 + 20.4 0.000 promoter-TSS (NM_031283) promoter-TSS (NM_031283) -317 NM_031283 83439 Hs.516297 NM_031283 ENSG00000152284 TCF7L1 TCF-3|TCF3 transcription factor 7 like 1 protein-coding chr6-360 chr6 89185373 89185605 + 20.4 0.000 intron (NM_001267582, intron 8 of 11) intron (NM_001267582, intron 8 of 11) 32288 NM_001256704 2569 Hs.99927 NM_002042 ENSG00000146276 GABRR1 - gamma-aminobutyric acid type A receptor rho1 subunit protein-coding chr10-269 chr10 124619850 124620082 + 20.4 0.000 3' UTR (NM_014661, exon 5 of 5) 3' UTR (NM_014661, exon 5 of 5) -84062 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr16-522 chr16 68234459 68234691 + 20.4 0.000 intron (NM_024939, intron 2 of 14) intron (NM_024939, intron 2 of 14) -1076 NR_106831 102466194 NR_106831 ENSG00000284259 MIR6773 hsa-mir-6773 microRNA 6773 ncRNA chr10-387 chr10 73730503 73730735 + 20.4 0.000 promoter-TSS (NR_026592) promoter-TSS (NR_026592) 57 NR_048575 2749 Hs.680699 NR_048575 ENSG00000250959 GLUD1P3 C10orf102|GLUDP3 glutamate dehydrogenase 1 pseudogene 3 pseudo chr4-106 chr4 169270959 169271191 + 20.4 0.000 promoter-TSS (NM_020870) promoter-TSS (NM_020870) -119 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr3-488 chr3 40504717 40504949 + 20.4 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -1206 NM_175888 253639 Hs.581541 NM_175888 ENSG00000177842 ZNF620 - zinc finger protein 620 protein-coding chr14-276 chr14 52000122 52000354 + 20.4 0.000 intron (NM_016039, intron 5 of 7) intron (NM_016039, intron 5 of 7) 10692 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding chr17-778 chr17 40551197 40551429 + 20.4 0.000 Intergenic MIR|SINE|MIR 9081 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr14-400 chr14 56340155 56340387 + 20.4 0.000 Intergenic Intergenic -174060 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr13-314 chr13 74328959 74329191 + 20.4 0.000 Intergenic Intergenic 90040 NR_144452 100288208 Hs.532467 NM_001013669 ENSG00000177596 LOC100288208 - uncharacterized LOC100288208 ncRNA chrX-125 chrX 68879149 68879381 + 20.4 0.000 Intergenic (CTCC)n|Simple_repeat|Simple_repeat 50268 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr3-783 chr3 62509948 62510180 + 20.4 0.000 intron (NM_183393, intron 16 of 26) MIRb|SINE|MIR -136514 NM_018008 55079 Hs.241523 NM_018008 ENSG00000153266 FEZF2 FEZ|FEZL|FKSG36|TOF|ZFP312|ZNF312 FEZ family zinc finger 2 protein-coding chr17-830 chr17 66494479 66494711 + 20.4 0.000 intron (NM_002737, intron 2 of 16) MLT1A1|LTR|ERVL-MaLR -77741 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr10-238 chr10 13299478 13299710 + 20.4 0.000 5' UTR (NM_001323084, exon 1 of 8) 5' UTR (NM_001323084, exon 1 of 8) 152 NM_001323084 5264 Hs.498732 NM_006214 ENSG00000107537 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding chr12-130 chr12 130871578 130871810 + 20.4 0.000 promoter-TSS (NM_001300796) promoter-TSS (NM_001300796) -300 NM_001300797 5901 Hs.10842 NM_006325 ENSG00000132341 RAN ARA24|Gsp1|TC4 RAN, member RAS oncogene family protein-coding chr17-649 chr17 42881314 42881546 + 20.4 0.000 intron (NR_027254, intron 3 of 5) intron (NR_027254, intron 3 of 5) 14285 NR_002773 90586 Hs.367781 NR_002773 ENSG00000260105 AOC4P AOC4|UPAT amine oxidase copper containing 4, pseudogene pseudo chr14-104 chr14 104749136 104749368 + 20.4 0.000 Intergenic MER54A|LTR|ERVL -3895 NM_021709 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr8-454 chr8 24649897 24650129 + 20.4 0.000 Intergenic L1ME3B|LINE|L1 -101395 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr7-394 chr7 130904316 130904548 + 20.4 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) 8878 NR_110472 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr20-113 chr20 8414839 8415071 + 20.4 0.000 intron (NM_182734, intron 3 of 32) MER5A1|DNA|hAT-Charlie 166251 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr20-128 chr20 3740004 3740236 + 20.4 0.000 intron (NM_001318322, intron 2 of 11) intron (NM_001318322, intron 2 of 11) 7435 NM_001197327 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr10-578 chr10 107925743 107925975 + 20.4 0.000 intron (NR_125760, intron 4 of 4) L1M4|LINE|L1 143434 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr15-104 chr15 60414120 60414352 + 20.4 0.000 Intergenic Intergenic -16250 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr8-253 chr8 22668928 22669160 + 20.4 0.000 promoter-TSS (NM_018688) promoter-TSS (NM_018688) 77 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr4-443 chr4 81632036 81632268 + 20.4 0.000 Intergenic Intergenic -160245 NM_001300735 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr1-539 chr1 29271743 29271975 + 20.4 0.000 intron (NM_133177, intron 7 of 30) intron (NM_133177, intron 7 of 30) 35337 NM_133177 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr3-217 chr3 56801801 56802033 + 20.4 0.000 promoter-TSS (NM_019555) promoter-TSS (NM_019555) 32 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr2-847 chr2 211008125 211008357 + 20.4 0.000 Intergenic MIR|SINE|MIR 390670 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr10-586 chr10 127479165 127479397 + 20.4 0.000 Intergenic L2b|LINE|L2 -70068 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding chr16-236 chr16 56610669 56610901 + 20.4 0.000 Intergenic MIRb|SINE|MIR 2201 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr2-493 chr2 177263491 177263723 + 20.4 0.000 5' UTR (NM_001145413, exon 1 of 5) 5' UTR (NM_001145413, exon 1 of 5) 524 NM_001313900 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr13-289 chr13 48153500 48153732 + 20.4 0.000 Intergenic HAL1|LINE|L1 -58475 NM_001270629 29079 Hs.181112 NM_014166 ENSG00000136146 MED4 ARC36|DRIP36|HSPC126|TRAP36|VDRIP mediator complex subunit 4 protein-coding chr19-645 chr19 49685864 49686096 + 20.4 0.000 intron (NM_198318, intron 7 of 9) intron (NM_198318, intron 7 of 9) -2705 NM_001101340 199800 Hs.311193 NM_001101340 ENSG00000224420 ADM5 AM5|C19orf76 adrenomedullin 5 (putative) protein-coding chr1-1056 chr1 242140817 242141049 + 20.4 0.000 intron (NM_001320272, intron 6 of 10) intron (NM_001320272, intron 6 of 10) -141835 NM_001004343 440738 Hs.534971 NM_001004343 ENSG00000197769 MAP1LC3C ATG8J|LC3C microtubule associated protein 1 light chain 3 gamma protein-coding chr4-544 chr4 43659493 43659725 + 20.4 0.000 Intergenic L1PA4|LINE|L1 -167066 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA chr13-171 chr13 40465736 40465968 + 20.4 0.000 intron (NR_024505, intron 4 of 6) intron (NR_024505, intron 4 of 6) 15154 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr22-126 chr22 38398592 38398824 + 20.4 0.000 5' UTR (NM_001289912, exon 1 of 15) 5' UTR (NM_001289912, exon 1 of 15) 207 NM_001289912 102800317 Hs.720223 NM_001289912 ENSG00000283900 TPTEP2-CSNK1E LOC400927-CSNK1E TPTEP2-CSNK1E readthrough protein-coding chr15-370 chr15 41926701 41926933 + 20.4 0.000 intron (NR_120332, intron 2 of 3) L2c|LINE|L2 5400 NR_120332 101928363 Hs.680195 NR_120332 EHD4-AS1 - EHD4 antisense RNA 1 ncRNA chr3-918 chr3 188264262 188264494 + 20.2 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 38973 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr18-154 chr18 26267691 26267923 + 20.2 0.000 intron (NM_005640, intron 3 of 14) Charlie16a|DNA|hAT-Charlie 41362 NM_001293725 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding chr2-577 chr2 8416488 8416720 + 20.2 0.000 Intergenic Intergenic -88185 NR_152741 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr10-703 chr10 76348318 76348550 + 20.2 0.000 intron (NM_001305581, intron 6 of 6) MER5A|DNA|hAT-Charlie -539610 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA chr17-149 chr17 45135410 45135642 + 20.2 0.000 promoter-TSS (NM_001135705) promoter-TSS (NM_001135705) -161 NM_024722 79777 Hs.110298 NM_024722 ENSG00000181513 ACBD4 HMFT0700 acyl-CoA binding domain containing 4 protein-coding chr13-215 chr13 33643278 33643510 + 20.2 0.000 intron (NM_001243476, intron 3 of 17) MLT1M|LTR|ERVL-MaLR 33400 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr6-230 chr6 106129627 106129859 + 20.2 0.000 Intergenic Intergenic 30802 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr1-1388 chr1 84144163 84144395 + 20.2 0.000 promoter-TSS (NM_182948) promoter-TSS (NM_182948) 8 NM_001300916 5567 Hs.487325 NM_002731 ENSG00000142875 PRKACB PKA C-beta|PKACB protein kinase cAMP-activated catalytic subunit beta protein-coding chr10-125 chr10 6401854 6402086 + 20.2 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 51654 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr4-276 chr4 175959563 175959795 + 20.2 0.000 intron (NR_048571, intron 1 of 5) intron (NR_048571, intron 1 of 5) 43012 NM_001261447 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding chr9-147 chr9 4666333 4666565 + 20.2 0.000 promoter-TSS (NR_148445) promoter-TSS (NR_148445) 31 NM_001353486 55064 Hs.179615 NM_017985 ENSG00000106686 SPATA6L C9orf68|bA6J24.2 spermatogenesis associated 6 like protein-coding chr3-459 chr3 177731907 177732139 + 20.2 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -84842 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-1044 chr1 230401999 230402231 + 20.2 0.000 intron (NM_001258311, intron 1 of 6) intron (NM_001258311, intron 1 of 6) 24217 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr17-704 chr17 954434 954666 + 20.2 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 25226 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-169 chr1 85554092 85554324 + 20.2 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 23992 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr20-355 chr20 38962262 38962494 + 20.2 0.000 promoter-TSS (NR_033905) promoter-TSS (NR_033905) 34 NM_021931 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr7-211 chr7 114944726 114944958 + 20.2 0.000 intron (NM_001166345, intron 3 of 4) intron (NM_001166345, intron 3 of 4) 22688 NM_001166345 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr14-368 chr14 101775112 101775344 + 20.2 0.000 intron (NM_001352915, intron 2 of 14) intron (NM_001352915, intron 2 of 14) 12858 NM_001352915 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr6-389 chr6 144215337 144215569 + 20.2 0.000 Intergenic Intergenic 64936 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr17-388 chr17 8436461 8436693 + 20.2 0.000 intron (NM_030808, intron 1 of 8) CpG 693 NM_001330129 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr21-101 chr21 44512150 44512382 + 20.2 0.000 intron (NR_103707, intron 6 of 6) intron (NR_103707, intron 6 of 6) -4949 NR_026548 114043 Hs.592163 NM_153204 TSPEAR-AS2 C21orf90 TSPEAR antisense RNA 2 ncRNA chr5-167 chr5 122845552 122845784 + 20.2 0.000 promoter-TSS (NM_014035) promoter-TSS (NM_014035) 55 NM_014035 28966 Hs.483200 NM_014035 ENSG00000064652 SNX24 PRO1284|SBBI31 sorting nexin 24 protein-coding chr16-508 chr16 30983441 30983673 + 20.2 0.000 intron (NM_014712, intron 17 of 18) intron (NM_014712, intron 17 of 18) -1650 NM_001142778 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr3-800 chr3 78669411 78669643 + 20.2 0.000 intron (NM_002941, intron 11 of 30) intron (NM_002941, intron 11 of 30) 349932 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr7-303 chr7 127437900 127438132 + 20.2 0.000 Intergenic Intergenic -38867 NR_110024 100506682 Hs.148450 NR_110024 ENSG00000226770 LOC100506682 - uncharacterized LOC100506682 ncRNA chr10-779 chr10 110056898 110057130 + 20.2 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -48633 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr17-841 chr17 74236401 74236633 + 20.2 0.000 intron (NM_001330453, intron 3 of 13) intron (NM_001330453, intron 3 of 13) -11849 NM_052869 94015 Hs.27935 NM_032646 ENSG00000141540 TTYH2 C17orf29 tweety family member 2 protein-coding chr1-259 chr1 2276012 2276244 + 20.2 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 47809 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr6-364 chr6 98359872 98360104 + 20.2 0.000 Intergenic Intergenic 335457 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr6-630 chr6 157314760 157314992 + 20.2 0.000 intron (NM_018452, intron 3 of 3) intron (NM_018452, intron 3 of 3) 9383 NM_018452 729515 Hs.157212 NM_018452 ENSG00000215712 TMEM242 BM033|C6orf35 transmembrane protein 242 protein-coding chr3-671 chr3 155744361 155744593 + 20.2 0.000 intron (NM_001349252, intron 1 of 24) CpG 594 NM_001349252 23007 Hs.567423 NM_014996 ENSG00000114805 PLCH1 PLCL3 phospholipase C eta 1 protein-coding chr13-306 chr13 64940397 64940629 + 20.2 0.000 Intergenic Intergenic -864502 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr14-113 chr14 73662558 73662790 + 20.2 0.000 intron (NM_001201366, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 17688 NM_031427 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr15-265 chr15 60359348 60359580 + 20.2 0.000 intron (NM_001002857, intron 6 of 13) intron (NM_001002857, intron 6 of 13) 38522 NM_001136015 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr2-889 chr2 17833290 17833522 + 20.2 0.000 Intergenic AluJo|SINE|Alu 16946 NM_001105569 343930 NM_001105569 ENSG00000151379 MSGN1 MSOG|pMsgn1 mesogenin 1 protein-coding chr6-214 chr6 43635752 43635984 + 20.2 0.000 promoter-TSS (NM_014628) promoter-TSS (NM_014628) 28 NM_014628 9587 Hs.122346 NM_014628 ENSG00000124688 MAD2L1BP CMT2 MAD2L1 binding protein protein-coding chr2-158 chr2 219543137 219543369 + 20.2 0.000 promoter-TSS (NM_001195731) promoter-TSS (NM_001195731) -156 NM_001195731 79586 Hs.516711 NM_024536 ENSG00000123989 CHPF CHSY2|CSS2 chondroitin polymerizing factor protein-coding chr15-177 chr15 63479714 63479946 + 20.2 0.000 Intergenic LTR101_Mam|LTR|ERVL -24681 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr1-865 chr1 22089542 22089774 + 20.2 0.000 intron (NM_001039802, intron 6 of 6) intron (NM_001039802, intron 6 of 6) 36949 NM_001039802 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding chr15-217 chr15 71294716 71294948 + 20.2 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -105773 NR_120349 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr1-1226 chr1 6665606 6665838 + 20.2 0.000 intron (NM_018198, intron 4 of 15) intron (NM_018198, intron 4 of 15) 36094 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr8-283 chr8 15745362 15745594 + 20.2 0.000 intron (NM_001356429, intron 8 of 10) L1PA16|LINE|L1 205215 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr3-778 chr3 60025333 60025565 + 20.2 0.000 intron (NM_001320901, intron 2 of 6) intron (NM_001320901, intron 2 of 6) 55460 NM_001320901 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr7-547 chr7 135147921 135148153 + 20.2 0.000 promoter-TSS (NM_018295) promoter-TSS (NM_018295) -35 NM_018295 55281 Hs.521213 NM_018295 ENSG00000146859 TMEM140 - transmembrane protein 140 protein-coding chr1-1440 chr1 149636642 149636874 + 20.2 0.000 intron (NR_111950, intron 1 of 8) intron (NR_111950, intron 1 of 8) 29746 NR_111951 57234 Hs.456578 NR_046135 ENSG00000277147 LINC00869 FAM91A2 long intergenic non-protein coding RNA 869 ncRNA chr1-629 chr1 39195365 39195597 + 20.2 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 111314 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-1367 chr1 58094621 58094853 + 20.2 0.000 intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 155766 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding chr16-501 chr16 18866677 18866909 + 20.2 0.000 intron (NM_015092, intron 22 of 62) intron (NM_015092, intron 22 of 62) 59611 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr15-155 chr15 84921201 84921433 + 20.2 0.000 intron (NM_001287761, intron 10 of 14) MIRc|SINE|MIR 36655 NM_201651 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr8-236 chr8 133360160 133360392 + 20.2 0.000 Intergenic MIRb|SINE|MIR -62972 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr15-157 chr15 98668789 98669021 + 20.2 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -17684 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr2-821 chr2 170284280 170284512 + 20.2 0.000 intron (NM_001083615, intron 7 of 33) MADE2|DNA|TcMar-Mariner 66547 NR_110576 101929753 Hs.534101 NR_110576 MYO3B-AS1 - MYO3B antisense RNA 1 ncRNA chr4-630 chr4 137266622 137266854 + 20.2 0.000 Intergenic MLT2A2|LTR|ERVL -53939 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chrX-285 chrX 136206170 136206402 + 20.2 0.000 intron (NM_001369331, intron 1 of 5) intron (NM_001369331, intron 1 of 5) 1384 NM_001369331 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr3-707 chr3 13004155 13004387 + 20.2 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -17170 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr22-423 chr22 44616731 44616963 + 20.2 0.000 intron (NR_044991, intron 3 of 4) intron (NR_044991, intron 3 of 4) 8572 NR_044991 414351 Hs.572878 NR_044991 LINC00229 C22orf10|NCRNA00229|dJ474I12.C22.2 long intergenic non-protein coding RNA 229 ncRNA chrX-120 chrX 50015356 50015588 + 20.2 0.000 TTS (NR_030226) TTS (NR_030226) 874 NR_030226 574504 NR_030226 ENSG00000272080 MIR502 MIRN502|hsa-mir-502|mir-502 microRNA 502 ncRNA chr11-523 chr11 94237732 94237964 + 20.2 0.000 Intergenic L1PA2|LINE|L1 -67789 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr1-1454 chr1 154736869 154737101 + 20.2 0.000 intron (NM_170782, intron 3 of 7) L2c|LINE|L2 -108988 NM_001365045 103 Hs.12341 NM_001111 ENSG00000160710 ADAR ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136 adenosine deaminase RNA specific protein-coding chr10-594 chr10 856601 856833 + 20.2 0.000 intron (NM_001351277, intron 5 of 17) L1MCa|LINE|L1 74988 NM_001351277 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr6-540 chr6 54299580 54299812 + 20.2 0.000 Intergenic L2c|LINE|L2 -8745 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding chr10-340 chr10 91796637 91796869 + 20.2 0.000 intron (NR_108071, intron 1 of 1) Tigger1|DNA|TcMar-Tigger 1443 NR_108070 100507633 Hs.291528 NR_108070 ENSG00000228701 TNKS2-AS1 - TNKS2 antisense RNA 1 (head to head) ncRNA chr4-435 chr4 55948575 55948807 + 20.2 0.000 promoter-TSS (NM_025009) promoter-TSS (NM_025009) -254 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr12-363 chr12 107843848 107844080 + 20.2 0.000 Intergenic CpG 59807 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chrX-29 chrX 107118742 107118974 + 20.2 0.000 promoter-TSS (NR_136729) promoter-TSS (NR_136729) -36 NM_001171080 55285 Hs.139053 NM_018301 ENSG00000089682 RBM41 - RNA binding motif protein 41 protein-coding chr10-620 chr10 17928423 17928655 + 20.2 0.000 Intergenic L1MB3|LINE|L1 -23300 NM_152725 221074 Hs.350895 NM_152725 ENSG00000148482 SLC39A12 LZT-Hs8|ZIP-12|bA570F3.1 solute carrier family 39 member 12 protein-coding chr9-467 chr9 127814620 127814852 + 20.2 0.000 TTS (NM_004957) TTS (NM_004957) -1330 NR_136302 102723566 NR_136302 ENSG00000225032 LOC102723566 - uncharacterized LOC102723566 ncRNA chr17-214 chr17 2370191 2370423 + 20.2 0.000 intron (NM_014853, intron 12 of 23) intron (NM_014853, intron 12 of 23) 30753 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr2-389 chr2 66433494 66433726 + 20.2 0.000 promoter-TSS (NR_046438) promoter-TSS (NR_046438) -140 NR_046438 730198 Hs.526753 NR_046438 MEIS1-AS3 - MEIS1 antisense RNA 3 ncRNA chr4-395 chr4 163697249 163697481 + 20.2 0.000 intron (NM_001166373, intron 4 of 7) MER68|LTR|ERVL -83831 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding chr5-310 chr5 164504209 164504441 + 20.2 0.000 intron (NR_105065, intron 2 of 3) intron (NR_105065, intron 2 of 3) 34046 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA chr2-310 chr2 39631897 39632129 + 20.0 0.000 Intergenic MER5A|DNA|hAT-Charlie -33485 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr17-693 chr17 81505891 81506123 + 20.0 0.000 Intergenic AluSg|SINE|Alu 6792 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr12-251 chr12 45452492 45452724 + 20.0 0.000 Intergenic L1MB3|LINE|L1 159918 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr5-440 chr5 135075888 135076120 + 20.0 0.000 intron (NR_161235, intron 2 of 5) intron (NR_161235, intron 2 of 5) -35957 NR_105049 101927953 Hs.436898 NR_105049 ENSG00000249082 C5orf66-AS1 Epist C5orf66 antisense RNA 1 ncRNA chr5-246 chr5 112245783 112246015 + 20.0 0.000 intron (NM_001347887, intron 9 of 23) intron (NM_001347887, intron 9 of 23) 17616 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr14-81 chr14 36661837 36662069 + 20.0 0.000 5' UTR (NM_006194, exon 2 of 5) 5' UTR (NM_006194, exon 2 of 5) 4385 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr3-732 chr3 32463556 32463788 + 20.0 0.000 Intergenic HERVH-int|LTR|ERV1 39180 NM_017801 54918 Hs.380627 NM_017801 ENSG00000091317 CMTM6 CKLFSF6|PRO2219 CKLF like MARVEL transmembrane domain containing 6 protein-coding chr9-487 chr9 133839246 133839478 + 20.0 0.000 intron (NM_001134398, intron 3 of 29) (ATGG)n|Simple_repeat|Simple_repeat -99407 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr3-855 chr3 142257740 142257972 + 20.0 0.000 Intergenic L1M4b|LINE|L1 -32271 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr10-740 chr10 91975057 91975289 + 20.0 0.000 intron (NM_003972, intron 14 of 37) intron (NM_003972, intron 14 of 37) 51403 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr19-515 chr19 3675238 3675470 + 20.0 0.000 intron (NM_001195733, intron 1 of 16) MIR3|SINE|MIR 25114 NM_001300849 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr14-484 chr14 104688254 104688486 + 20.0 0.000 Intergenic Intergenic -1236 NM_032714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr7-331 chr7 115821747 115821979 + 20.0 0.000 Intergenic L1MCb|LINE|L1 146450 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding chr22-365 chr22 24198122 24198354 + 20.0 0.000 Intergenic MLT2F|LTR|ERVL 16751 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr20-396 chr20 62647521 62647753 + 20.0 0.000 intron (NM_016354, intron 1 of 11) intron (NM_016354, intron 1 of 11) 5134 NM_016354 28231 Hs.235782 NM_016354 ENSG00000101187 SLCO4A1 OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12 solute carrier organic anion transporter family member 4A1 protein-coding chr1-830 chr1 3613417 3613649 + 20.0 0.000 Intergenic Intergenic -2025 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr12-659 chr12 62435604 62435836 + 20.0 0.000 Intergenic L1M2|LINE|L1 -31106 NM_015026 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr20-368 chr20 45890240 45890472 + 20.0 0.000 exon (NM_001278535, exon 1 of 2) exon (NM_001278535, exon 1 of 2) 212 NM_001167594 5476 Hs.609336 NM_000308 ENSG00000064601 CTSA GLB2|GSL|NGBE|PPCA|PPGB cathepsin A protein-coding chr8-339 chr8 102122865 102123097 + 20.0 0.000 intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 1353 NM_001040628 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr7-695 chr7 34820305 34820537 + 20.0 0.000 intron (NM_207172, intron 4 of 8) intron (NM_207172, intron 4 of 8) 13910 NR_015356 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA chr22-108 chr22 29306374 29306606 + 20.0 0.000 promoter-TSS (NM_001362985) promoter-TSS (NM_001362985) -533 NM_152236 10634 Hs.322852 NM_006478 ENSG00000185340 GAS2L1 GAR22 growth arrest specific 2 like 1 protein-coding chr8-284 chr8 17847364 17847596 + 20.0 0.000 Intergenic MamRTE1|LINE|RTE-BovB -45901 NM_001363061 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr3-770 chr3 53868541 53868773 + 20.0 0.000 3' UTR (NM_022899, exon 13 of 13) 3' UTR (NM_022899, exon 13 of 13) 13495 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr12-348 chr12 45966297 45966529 + 20.0 0.000 intron (NM_004719, intron 1 of 14) L2a|LINE|L2 24161 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr20-168 chr20 31069018 31069250 + 20.0 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -188530 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr3-514 chr3 58177729 58177961 + 20.0 0.000 Intergenic CpG -7210 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr10-231 chr10 110514153 110514385 + 20.0 0.000 Intergenic Intergenic 16362 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr4-361 chr4 90958309 90958541 + 20.0 0.000 intron (NM_001145065, intron 9 of 10) intron (NM_001145065, intron 9 of 10) 723394 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr20-351 chr20 37969724 37969956 + 20.0 0.000 Intergenic L1ME1|LINE|L1 63616 NM_014657 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr5-238 chr5 54825224 54825456 + 20.0 0.000 Intergenic (TACTA)n|Simple_repeat|Simple_repeat -81082 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr5-493 chr5 36502713 36502945 + 20.0 0.000 Intergenic Intergenic -103526 NM_001289940 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr3-247 chr3 49066354 49066586 + 20.0 0.000 intron (NM_017730, intron 3 of 10) AluSg4|SINE|Alu 27162 NM_001320582 54870 Hs.297389 NM_017730 ENSG00000198218 QRICH1 AB-DIP|VERBRAS glutamine rich 1 protein-coding chr4-366 chr4 102620715 102620947 + 20.0 0.000 Intergenic Intergenic -118345 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr17-400 chr17 39134984 39135216 + 20.0 0.000 intron (NM_020405, intron 2 of 13) L3|LINE|CR1 16537 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr16-189 chr16 34594771 34595003 + 20.0 0.000 Intergenic Intergenic -213407 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr4-475 chr4 184700142 184700374 + 20.0 0.000 intron (NR_104593, intron 10 of 11) intron (NR_104593, intron 10 of 11) 33838 NM_024629 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr3-437 chr3 58629010 58629242 + 20.0 0.000 intron (NR_134853, intron 2 of 3) intron (NR_134853, intron 2 of 3) -1516 NM_001282714 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr1-1624 chr1 246836464 246836696 + 20.0 0.000 Intergenic L1MB8|LINE|L1 46963 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr1-997 chr1 170462007 170462239 + 20.0 0.000 intron (NR_125958, intron 2 of 2) intron (NR_125958, intron 2 of 2) -69999 NM_001146039 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr2-1026 chr2 126699876 126700108 + 20.0 0.000 Intergenic Intergenic 43834 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr18-113 chr18 3499334 3499566 + 20.0 0.000 intron (NM_001242762, intron 9 of 9) intron (NM_001242762, intron 9 of 9) 33200 NR_110428 100505592 Hs.635114 NR_110428 ENSG00000266835 GAPLINC LINC01540 gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA ncRNA chr18-224 chr18 50100321 50100553 + 20.0 0.000 intron (NM_001080467, intron 1 of 39) intron (NM_001080467, intron 1 of 39) 26126 NR_036204 100422865 NR_036204 ENSG00000283343 MIR4320 - microRNA 4320 ncRNA chr10-734 chr10 89624911 89625143 + 20.0 0.000 intron (NM_148977, intron 1 of 6) AluJb|SINE|Alu 18889 NM_138316 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr8-65 chr8 17663019 17663251 + 20.0 0.000 intron (NR_156437, intron 7 of 13) intron (NR_156437, intron 7 of 13) 13366 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr6-483 chr6 2469076 2469308 + 20.0 0.000 Intergenic Intergenic -165308 NR_149119 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr17-310 chr17 41730787 41731019 + 20.0 0.000 intron (NM_001367460, intron 6 of 11) intron (NM_001367460, intron 6 of 11) 3740 NM_001367459 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr18-27 chr18 57803312 57803544 + 20.0 0.000 promoter-TSS (NM_005603) promoter-TSS (NM_005603) -113 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr1-353 chr1 39575701 39575933 + 20.0 0.000 exon (NM_001135653, exon 1 of 16) exon (NM_001135653, exon 1 of 16) 973 NM_001135654 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding chr3-744 chr3 39096866 39097098 + 20.0 0.000 TTS (NM_001303403) TTS (NM_001303403) 10645 NM_001278789 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr4-588 chr4 94363662 94363894 + 20.0 0.000 Intergenic AluJr4|SINE|Alu -20942 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding chr11-969 chr11 119568053 119568285 + 20.0 0.000 Intergenic Intergenic -143184 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding KI270758.1-1 KI270758.1 70864 71096 + 20.0 0.000 NA NA NA NA chrX-216 chrX 36760789 36761021 + 20.0 0.000 Intergenic Intergenic -247454 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr10-777 chr10 107653934 107654166 + 20.0 0.000 Intergenic MSTA1|LTR|ERVL-MaLR 415243 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr19-744 chr19 1459790 1460022 + 20.0 0.000 intron (NM_005883, intron 10 of 14) L2b|LINE|L2 6922 NM_001351273 10297 Hs.446376 NM_005883 ENSG00000115266 APC2 APCL APC regulator of WNT signaling pathway 2 protein-coding chr17-278 chr17 73030771 73031003 + 20.0 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 61801 NM_139177 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr1-695 chr1 204411634 204411866 + 20.0 0.000 promoter-TSS (NM_032833) promoter-TSS (NM_032833) 67 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr5-423 chr5 96876524 96876756 + 20.0 0.000 intron (NM_001329229, intron 1 of 17) intron (NM_001329229, intron 1 of 17) 701 NM_022350 64167 Hs.482910 NM_022350 ENSG00000164308 ERAP2 L-RAP|LRAP endoplasmic reticulum aminopeptidase 2 protein-coding chr9-516 chr9 70574224 70574456 + 20.0 0.000 intron (NM_001366143, intron 21 of 25) L2b|LINE|L2 -159683 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr18-222 chr18 48980327 48980559 + 20.0 0.000 Intergenic MIR|SINE|MIR -29732 NM_005904 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr13-308 chr13 68709118 68709350 + 19.8 0.000 Intergenic Intergenic 176091 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr2-740 chr2 238169894 238170126 + 19.8 0.000 TTS (NM_030768) TTS (NM_030768) 11040 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr1-1254 chr1 14486689 14486921 + 19.8 0.000 Intergenic Intergenic -66832 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr6-466 chr6 148240470 148240702 + 19.8 0.000 Intergenic Intergenic -31742 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr21-153 chr21 41613105 41613337 + 19.8 0.000 Intergenic Intergenic -66081 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr22-354 chr22 46669239 46669471 + 19.8 0.000 intron (NM_015124, intron 13 of 18) intron (NM_015124, intron 13 of 18) 48969 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr10-272 chr10 133067645 133067877 + 19.8 0.000 Intergenic Intergenic 18936 NR_111905 100128127 Hs.694139 NR_111905 ADGRA1-AS1 GPR123-AS1 adhesion G protein-coupled receptor A1 antisense RNA 1 ncRNA chr16-552 chr16 717822 718054 + 19.8 0.000 3' UTR (NM_024042, exon 4 of 4) 3' UTR (NM_024042, exon 4 of 4) 2820 NM_024042 79006 Hs.533772 NM_024042 ENSG00000103260 METRN C16orf23|c380A1.2 meteorin, glial cell differentiation regulator protein-coding chr8-510 chr8 71991943 71992175 + 19.8 0.000 intron (NR_033652, intron 4 of 4) intron (NR_033652, intron 4 of 4) 83525 NM_007332 8989 Hs.716816 NM_007332 ENSG00000104321 TRPA1 ANKTM1|FEPS|FEPS1 transient receptor potential cation channel subfamily A member 1 protein-coding chr7-275 chr7 44735530 44735762 + 19.8 0.000 Intergenic L1MB8|LINE|L1 -12920 NM_001300959 83637 Hs.77978 NM_031449 ENSG00000122515 ZMIZ2 NET27|TRAFIP20|ZIMP7|hZIMP7 zinc finger MIZ-type containing 2 protein-coding chr5-714 chr5 150142882 150143114 + 19.8 0.000 intron (NM_002609, intron 1 of 22) MER44D|DNA|TcMar-Tigger 12847 NR_149150 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr6-178 chr6 1526655 1526887 + 19.8 0.000 Intergenic Intergenic -78760 NR_125804 101927703 Hs.607964 NR_125804 FOXCUT LINC01379|TCONS_00011636 FOXC1 upstream transcript ncRNA chr1-1102 chr1 38118079 38118311 + 19.8 0.000 Intergenic Intergenic 28964 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr6-444 chr6 79270032 79270264 + 19.8 0.000 Intergenic Intergenic -35466 NM_001201362 9324 Hs.77558 NM_004242 ENSG00000118418 HMGN3 PNAS-24|PNAS-25|TRIP7 high mobility group nucleosomal binding domain 3 protein-coding chr7-670 chr7 12009318 12009550 + 19.8 0.000 Intergenic L3|LINE|CR1 -177236 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr16-286 chr16 41824 42056 + 19.8 0.000 Intergenic HERV15-int|LTR|ERV1 11668 NM_016310 51728 Hs.632223 NM_016310 ENSG00000161980 POLR3K C11|C11-RNP3|My010|RPC10|RPC11|RPC12.5 RNA polymerase III subunit K protein-coding chr1-1549 chr1 204466077 204466309 + 19.8 0.000 intron (NM_002646, intron 3 of 33) intron (NM_002646, intron 3 of 33) 24153 NM_002646 5287 Hs.497487 NM_002646 ENSG00000133056 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding chr2-288 chr2 232683245 232683477 + 19.8 0.000 TTS (NM_001243252) TTS (NM_001243252) -13970 NM_001103147 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr4-581 chr4 88126274 88126506 + 19.8 0.000 intron (NM_001257386, intron 5 of 15) L1PA7|LINE|L1 32249 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr3-650 chr3 95080440 95080672 + 19.8 0.000 Intergenic Intergenic 142293 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr6-486 chr6 5190445 5190677 + 19.8 0.000 intron (NM_001164840, intron 2 of 2) intron (NM_001164840, intron 2 of 2) -42239 NR_037462 100500900 NR_037462 ENSG00000265083 MIR3691 mir-3691 microRNA 3691 ncRNA chr5-479 chr5 177455308 177455540 + 19.8 0.000 exon (NM_001174102, exon 2 of 3) exon (NM_001174102, exon 2 of 3) 7002 NM_001364152 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr22-360 chr22 19470122 19470354 + 19.8 0.000 intron (NM_001035247, intron 4 of 11) intron (NM_001035247, intron 4 of 11) 8955 NM_001035247 7353 Hs.474213 NM_005659 ENSG00000070010 UFD1 UFD1L ubiquitin recognition factor in ER associated degradation 1 protein-coding chr18-232 chr18 58581309 58581541 + 19.8 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -19195 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr5-659 chr5 115257710 115257942 + 19.8 0.000 intron (NM_005023, intron 1 of 8) intron (NM_005023, intron 1 of 8) 5051 NM_005023 5229 Hs.254006 NM_005023 ENSG00000164219 PGGT1B BGGI|GGTI protein geranylgeranyltransferase type I subunit beta protein-coding chr1-825 chr1 2339831 2340063 + 19.8 0.000 intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 12714 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr7-235 chr7 56052083 56052315 + 19.8 0.000 promoter-TSS (NM_004577) promoter-TSS (NM_004577) 434 NM_001762 908 Hs.82916 NM_001762 ENSG00000146731 CCT6A CCT-zeta|CCT-zeta-1|CCT6|Cctz|HTR3|MoDP-2|TCP-1-zeta|TCP20|TCPZ|TTCP20 chaperonin containing TCP1 subunit 6A protein-coding chr4-294 chr4 53764091 53764323 + 19.8 0.000 Intergenic Intergenic 68306 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA chr4-134 chr4 139453121 139453353 + 19.8 0.000 promoter-TSS (NM_031296) promoter-TSS (NM_031296) 804 NR_159964 107984036 Hs.605782 NR_159963 LOC107984036 - uncharacterized LOC107984036 ncRNA chr16-364 chr16 57634230 57634462 + 19.8 0.000 intron (NM_001145772, intron 1 of 14) intron (NM_001145772, intron 1 of 14) -5146 NM_001145774 9289 Hs.513633 NM_005682 ENSG00000205336 ADGRG1 BFPP|BPPR|GPR56|TM7LN4|TM7XN1 adhesion G protein-coupled receptor G1 protein-coding chr7-532 chr7 121002278 121002510 + 19.8 0.000 intron (NM_001105533, intron 1 of 17) intron (NM_001105533, intron 1 of 17) 13003 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr10-728 chr10 87635837 87636069 + 19.8 0.000 Intergenic HERVL-int|LTR|ERVL -23925 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr10-78 chr10 80612027 80612259 + 19.8 0.000 intron (NM_207372, intron 6 of 6) Charlie18a|DNA|hAT-Charlie -37654 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr2-705 chr2 201149097 201149329 + 19.8 0.000 intron (NR_040030, intron 4 of 6) intron (NR_040030, intron 4 of 6) 8579 NR_040030 65072 Hs.664613 NR_040030 ENSG00000226312 CFLAR-AS1 ALS2CR10 CFLAR antisense RNA 1 ncRNA chr15-279 chr15 71115897 71116129 + 19.8 0.000 Intergenic CpG -25436 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr14-259 chr14 74404805 74405037 + 19.8 0.000 TTS (NM_001105579) TTS (NM_001105579) 21289 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chrX-242 chrX 57528571 57528803 + 19.8 0.000 Intergenic L1M2|LINE|L1 -63149 NM_007157 158586 Hs.156257 NM_007157 ENSG00000198455 ZXDB ZNF905|dJ83L6.1 zinc finger X-linked duplicated B protein-coding chr4-204 chr4 1020294 1020526 + 19.8 0.000 intron (NM_001370296, intron 2 of 6) intron (NM_001370296, intron 2 of 6) 7946 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr9-575 chr9 15295862 15296094 + 19.8 0.000 intron (NM_001168341, intron 1 of 17) intron (NM_001168341, intron 1 of 17) 11382 NM_152574 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding chr1-838 chr1 10032966 10033198 + 19.8 0.000 5' UTR (NM_001105562, exon 1 of 28) 5' UTR (NM_001105562, exon 1 of 28) 124 NM_006048 10277 Hs.593974 NM_006048 ENSG00000130939 UBE4B E4|HDNB1|UBOX3|UFD2|UFD2A ubiquitination factor E4B protein-coding chr2-832 chr2 188114157 188114389 + 19.8 0.000 intron (NR_126396, intron 2 of 2) intron (NR_126396, intron 2 of 2) 173418 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr15-339 chr15 84074190 84074422 + 19.8 0.000 Intergenic L1PA6|LINE|L1 -5881 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr14-118 chr14 105151943 105152175 + 19.8 0.000 intron (NM_145159, intron 6 of 24) intron (NM_145159, intron 6 of 24) -1195 NR_106823 102465458 NR_106823 ENSG00000273778 MIR6765 hsa-mir-6765 microRNA 6765 ncRNA chr10-701 chr10 75792654 75792886 + 19.8 0.000 intron (NM_032024, intron 1 of 5) MIR|SINE|MIR 10009 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr20-239 chr20 50645644 50645876 + 19.8 0.000 non-coding (NR_111906, exon 2 of 3) non-coding (NR_111906, exon 2 of 3) 289 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr2-841 chr2 207163483 207163715 + 19.8 0.000 intron (NM_001270943, intron 1 of 3) intron (NM_001270943, intron 1 of 3) 2349 NM_003709 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr10-401 chr10 114374523 114374755 + 19.8 0.000 intron (NM_001351073, intron 1 of 19) intron (NM_001351073, intron 1 of 19) 29863 NM_001001936 84632 Hs.501106 NM_032550 ENSG00000169129 AFAP1L2 CTB-1144G6.4|KIAA1914|XB130 actin filament associated protein 1 like 2 protein-coding chr17-881 chr17 82072580 82072812 + 19.8 0.000 Intergenic AluY|SINE|Alu -6892 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr15-357 chr15 34056126 34056358 + 19.8 0.000 intron (NM_012125, intron 2 of 2) MIR3|SINE|MIR -17038 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr12-618 chr12 46908587 46908819 + 19.8 0.000 Intergenic L1MA3|LINE|L1 -82706 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr4-463 chr4 153399721 153399953 + 19.8 0.000 intron (NM_032117, intron 6 of 7) intron (NM_032117, intron 6 of 7) 55149 NM_032117 84057 Hs.294088 NM_032117 ENSG00000121211 MND1 GAJ meiotic nuclear divisions 1 protein-coding chr2-959 chr2 59032642 59032874 + 19.8 0.000 intron (NR_033873, intron 11 of 13) intron (NR_033873, intron 11 of 13) -184950 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chrX-195 chrX 141128983 141129215 + 19.8 0.000 Intergenic AluSg7|SINE|Alu -10963 NR_004394 26827 NR_004394 ENSG00000206625 RNU6-1 RNU6|RNU6A|U6|U6-1 RNA, U6 small nuclear 1 snRNA chr4-345 chr4 52959613 52959845 + 19.8 0.000 intron (NM_152540, intron 5 of 8) intron (NM_152540, intron 5 of 8) 97412 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding chr2-817 chr2 156458172 156458404 + 19.8 0.000 intron (NM_000408, intron 1 of 16) intron (NM_000408, intron 1 of 16) 21909 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr3-740 chr3 37924762 37924994 + 19.8 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) -44526 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr8-51 chr8 30555860 30556092 + 19.8 0.000 intron (NM_001008711, intron 7 of 9) intron (NM_001008711, intron 7 of 9) -82604 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr6-507 chr6 17876140 17876372 + 19.8 0.000 intron (NM_001105567, intron 3 of 36) intron (NM_001105567, intron 3 of 36) 111379 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr5-586 chr5 33642097 33642329 + 19.8 0.000 intron (NM_001324512, intron 10 of 21) intron (NM_001324512, intron 10 of 21) 201437 NR_047676 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr14-358 chr14 74459686 74459918 + 19.8 0.000 Intergenic Intergenic 20402 NR_039858 100616211 NR_039858 ENSG00000283944 MIR4709 mir-4709 microRNA 4709 ncRNA chr12-145 chr12 6554598 6554830 + 19.8 0.000 intron (NR_036467, intron 1 of 9) intron (NR_036467, intron 1 of 9) 1328 NM_001330325 25900 Hs.15243 NM_015438 ENSG00000010295 IFFO1 HOM-TES-103|IFFO intermediate filament family orphan 1 protein-coding chr15-202 chr15 97328581 97328813 + 19.8 0.000 Intergenic ERVL-E-int|LTR|ERVL 193114 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA chr20-176 chr20 45323757 45323989 + 19.8 0.000 Intergenic Intergenic -15344 NM_003833 8785 Hs.278489 NM_003833 ENSG00000124159 MATN4 - matrilin 4 protein-coding chr9-580 chr9 18985877 18986109 + 19.6 0.000 intron (NM_001287049, intron 1 of 3) intron (NM_001287049, intron 1 of 3) 47216 NM_153707 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr1-1194 chr1 227072772 227073004 + 19.6 0.000 intron (NM_001366019, intron 19 of 36) intron (NM_001366019, intron 19 of 36) 132594 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr16-343 chr16 89257386 89257618 + 19.6 0.000 Intergenic LTR1A2|LTR|ERV1 -38626 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr16-226 chr16 11255792 11256024 + 19.6 0.000 intron (NM_003745, intron 1 of 1) CpG 274 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr3-775 chr3 57999241 57999473 + 19.6 0.000 Intergenic MIRb|SINE|MIR -9065 NM_001457 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr15-180 chr15 64842180 64842412 + 19.6 0.000 intron (NM_001195059, intron 1 of 4) MIRb|SINE|MIR 381 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chr1-1263 chr1 16981137 16981369 + 19.6 0.000 promoter-TSS (NM_001135248) promoter-TSS (NM_001135248) 333 NM_017459 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr15-257 chr15 52179143 52179375 + 19.6 0.000 promoter-TSS (NR_102751) promoter-TSS (NR_102751) 666 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr4-675 chr4 182896273 182896505 + 19.6 0.000 intron (NM_001012732, intron 3 of 5) intron (NM_001012732, intron 3 of 5) 20864 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr6-289 chr6 112149576 112149808 + 19.6 0.000 intron (NM_001105206, intron 17 of 38) THE1C|LTR|ERVL-MaLR 62101 NM_001033564 619208 Hs.591340 NM_001033564 ENSG00000203778 FAM229B C6orf225 family with sequence similarity 229 member B protein-coding chr21-154 chr21 42237444 42237676 + 19.6 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 17662 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr6-305 chr6 161632020 161632252 + 19.6 0.000 intron (NM_004562, intron 7 of 11) intron (NM_004562, intron 7 of 11) 161159 NR_134593 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr12-750 chr12 124868999 124869231 + 19.6 0.000 Intergenic L2a|LINE|L2 -5251 NR_160424 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr1-1045 chr1 230849247 230849479 + 19.6 0.000 intron (NM_001136494, intron 4 of 5) intron (NM_001136494, intron 4 of 5) 6644 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr5-590 chr5 36068256 36068488 + 19.6 0.000 Intergenic L2a|LINE|L2 -1490 NR_031764 167127 Hs.348941 NM_174914 ENSG00000168671 UGT3A2 - UDP glycosyltransferase family 3 member A2 protein-coding chr18-125 chr18 28112212 28112444 + 19.6 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 64802 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-371 chr19 1249194 1249426 + 19.6 0.000 intron (NM_177401, intron 1 of 7) CpG 757 NM_177401 90007 Hs.465529 NM_177401 ENSG00000167470 MIDN - midnolin protein-coding chr8-160 chr8 38468577 38468809 + 19.6 0.000 promoter-TSS (NM_001354369) promoter-TSS (NM_001354369) -58 NM_001174064 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr13-300 chr13 51764350 51764582 + 19.6 0.000 3' UTR (NM_052950, exon 12 of 12) 3' UTR (NM_052950, exon 12 of 12) 39696 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr10-292 chr10 103616776 103617008 + 19.6 0.000 intron (NM_001365079, intron 5 of 8) intron (NM_001365079, intron 5 of 8) 61323 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr2-156 chr2 210171421 210171653 + 19.6 0.000 promoter-TSS (NM_152519) promoter-TSS (NM_152519) -128 NM_152519 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr14-351 chr14 64109916 64110148 + 19.6 0.000 intron (NM_015180, intron 65 of 114) intron (NM_015180, intron 65 of 114) -14907 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA chr17-776 chr17 40224787 40225019 + 19.6 0.000 intron (NM_133264, intron 1 of 7) intron (NM_133264, intron 1 of 7) 5599 NM_133264 147179 Hs.421622 NM_133264 ENSG00000171475 WIPF2 WICH|WIRE WAS/WASL interacting protein family member 2 protein-coding chr10-363 chr10 6365417 6365649 + 19.6 0.000 Intergenic Intergenic 15217 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr8-228 chr8 122816289 122816521 + 19.6 0.000 intron (NM_001362797, intron 1 of 4) Tigger1|DNA|TcMar-Tigger 34750 NM_014943 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr1-1510 chr1 179754109 179754341 + 19.6 0.000 intron (NM_001329719, intron 1 of 4) intron (NM_001329719, intron 1 of 4) 10934 NR_138089 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr3-576 chr3 178731116 178731348 + 19.6 0.000 intron (NM_001278911, intron 1 of 4) L1MC5|LINE|L1 129173 NR_126561 104797538 Hs.478363 NR_126560 KCNMB2-AS1 - KCNMB2 antisense RNA 1 ncRNA chr4-364 chr4 98794745 98794977 + 19.6 0.000 Intergenic Intergenic 134272 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr9-613 chr9 77115021 77115253 + 19.6 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -62308 NM_015186 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr14-340 chr14 36272562 36272794 + 19.6 0.000 Intergenic Intergenic 47959 NM_001308110 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr2-208 chr2 80694796 80695028 + 19.6 0.000 Intergenic Intergenic 381533 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr8-562 chr8 123671093 123671325 + 19.6 0.000 Intergenic Intergenic -17408 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr11-473 chr11 103924163 103924395 + 19.6 0.000 intron (NM_025208, intron 6 of 6) intron (NM_025208, intron 6 of 6) 74373 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr12-171 chr12 6376623 6376855 + 19.6 0.000 intron (NM_001270987, intron 1 of 9) intron (NM_001270987, intron 1 of 9) 618 NM_001159575 6337 Hs.591047 NM_001038 ENSG00000111319 SCNN1A BESC2|ENaCa|ENaCalpha|LIDLS3|SCNEA|SCNN1 sodium channel epithelial 1 alpha subunit protein-coding chr10-400 chr10 112639415 112639647 + 19.6 0.000 intron (NM_001365712, intron 6 of 8) intron (NM_001365712, intron 6 of 8) 5361 NR_036177 100422909 NR_036177 ENSG00000264763 MIR4295 - microRNA 4295 ncRNA chr10-187 chr10 48656357 48656589 + 19.6 0.000 promoter-TSS (NR_045675) promoter-TSS (NR_045675) -208 NM_001347738 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr11-918 chr11 78799231 78799463 + 19.6 0.000 intron (NM_001098816, intron 15 of 33) MIRc|SINE|MIR -224483 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr1-427 chr1 169942581 169942813 + 19.6 0.000 intron (NM_014970, intron 19 of 19) intron (NM_014970, intron 19 of 19) -48738 NM_181093 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr3-167 chr3 14459446 14459678 + 19.6 0.000 intron (NR_103507, intron 6 of 13) intron (NR_103507, intron 6 of 13) 56956 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr7-435 chr7 101322106 101322338 + 19.6 0.000 promoter-TSS (NM_001287525) promoter-TSS (NM_001287525) -399 NM_001287526 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr15-22 chr15 40894304 40894536 + 19.6 0.000 promoter-TSS (NM_020857) promoter-TSS (NM_020857) -30 NM_020857 57617 Hs.23876 NM_020857 ENSG00000104142 VPS18 PEP3 VPS18 core subunit of CORVET and HOPS complexes protein-coding chr20-236 chr20 48339682 48339914 + 19.6 0.000 Intergenic (TCCC)n|Simple_repeat|Simple_repeat -20113 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr8-274 chr8 124473630 124473862 + 19.6 0.000 intron (NR_108048, intron 2 of 2) intron (NR_108048, intron 2 of 2) 608 NR_108048 101927612 Hs.633137 NR_108047 ENSG00000245149 RNF139-AS1 - RNF139 antisense RNA 1 (head to head) ncRNA chr4-596 chr4 104605650 104605882 + 19.6 0.000 intron (NR_125926, intron 1 of 9) L1M3a|LINE|L1 -110872 NR_132741 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding chr4-408 chr4 2061135 2061367 + 19.6 0.000 intron (NM_178557, intron 2 of 2) CpG-20881 1924 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr2-565 chr2 231488289 231488521 + 19.6 0.000 Intergenic Intergenic -23921 NM_005381 4691 Hs.79110 NM_005381 ENSG00000115053 NCL C23|Nsr1 nucleolin protein-coding chr18-120 chr18 12883242 12883474 + 19.6 0.000 intron (NM_080423, intron 1 of 8) CpG 879 NM_002828 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding chr8-329 chr8 94720016 94720248 + 19.6 0.000 intron (NM_181787, intron 1 of 18) (GGCGGT)n|Simple_repeat|Simple_repeat 232 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr14-285 chr14 59407201 59407433 + 19.6 0.000 Intergenic Intergenic 58063 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr12-301 chr12 57229686 57229918 + 19.6 0.000 promoter-TSS (NR_029415) promoter-TSS (NR_029415) 91 NM_001166356 6472 Hs.741179 NM_005412 ENSG00000182199 SHMT2 GLYA|HEL-S-51e|SHMT serine hydroxymethyltransferase 2 protein-coding chrX-283 chrX 134141640 134141872 + 19.6 0.000 Intergenic L2c|LINE|L2 27696 NR_029852 574031 NR_029852 ENSG00000284499 MIR363 MIR-363|MIRN363|hsa-mir-363 microRNA 363 ncRNA chr11-790 chr11 14369579 14369811 + 19.6 0.000 Intergenic LTR79|LTR|ERVL -5189 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr16-234 chr16 50622953 50623185 + 19.6 0.000 intron (NM_033119, intron 5 of 9) L2b|LINE|L2 -45786 NR_110908 101927272 Hs.460777 NR_110908 ENSG00000260249 LOC101927272 - uncharacterized LOC101927272 ncRNA chr11-988 chr11 131571954 131572186 + 19.6 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -31203 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr11-817 chr11 42788275 42788507 + 19.6 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 480978 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chrX-109 chrX 23742323 23742555 + 19.6 0.000 intron (NM_001037171, intron 1 of 15) intron (NM_001037171, intron 1 of 15) 837 NM_001037171 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr19-631 chr19 43022206 43022438 + 19.6 0.000 intron (NM_203287, intron 1 of 4) LTR8B|LTR|ERV1 4147 NM_203287 5680 Hs.741150 NM_002785 ENSG00000243130 PSG11 PSBG-11|PSBG-13|PSG13|PSG14 pregnancy specific beta-1-glycoprotein 11 protein-coding chr1-1186 chr1 212622788 212623020 + 19.6 0.000 Intergenic L1MB5|LINE|L1 -1570 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding chr2-510 chr2 224579468 224579700 + 19.6 0.000 intron (NM_003590, intron 1 of 15) intron (NM_003590, intron 1 of 15) 5779 NM_003590 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr3-377 chr3 101862304 101862536 + 19.6 0.000 Intergenic L2a|LINE|L2 12906 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr20-127 chr20 3406351 3406583 + 19.6 0.000 intron (NM_001009984, intron 1 of 36) (CTCTCC)n|Simple_repeat|Simple_repeat 1195 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr14-329 chr14 104731425 104731657 + 19.6 0.000 intron (NM_199165, intron 1 of 12) intron (NM_199165, intron 1 of 12) 1697 NM_199165 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr6-589 chr6 125611705 125611937 + 19.6 0.000 Intergenic Intergenic -62532 NR_038906 643623 Hs.520367 NR_038906 ENSG00000224506 LINC02523 - long intergenic non-protein coding RNA 2523 ncRNA chr1-1114 chr1 53554527 53554759 + 19.6 0.000 intron (NM_147193, intron 3 of 9) intron (NM_147193, intron 3 of 9) 95244 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding KQ031384.1-1 KQ031384.1 455810 456042 + 19.6 0.000 NA NA NA NA chr10-738 chr10 91613476 91613708 + 19.6 0.000 Intergenic Intergenic -2132 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr18-30 chr18 25165522 25165754 + 19.6 0.000 intron (NM_001308225, intron 4 of 6) intron (NM_001308225, intron 4 of 6) -177659 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr8-467 chr8 29752364 29752596 + 19.6 0.000 TTS (NR_125816) TTS (NR_125816) 4171 NR_125816 101929450 Hs.512440 NR_125814 ENSG00000253490 LINC02099 - long intergenic non-protein coding RNA 2099 ncRNA chr1-998 chr1 171617148 171617380 + 19.6 0.000 Intergenic LTR18B|LTR|ERVL -2499 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr10-817 chr10 125201141 125201373 + 19.6 0.000 Intergenic Intergenic -40227 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-661 chr1 119882158 119882390 + 19.6 0.000 Intergenic Intergenic 14241 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr13-100 chr13 101307224 101307456 + 19.6 0.000 intron (NM_001350749, intron 7 of 43) intron (NM_001350749, intron 7 of 43) 109168 NM_001350751 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr22-181 chr22 24289354 24289586 + 19.4 0.000 intron (NM_015330, intron 2 of 16) intron (NM_015330, intron 2 of 16) 18639 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr16-432 chr16 46380804 46381036 + 19.4 0.000 Intergenic Intergenic 188177 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr19-498 chr19 48645545 48645777 + 19.4 0.000 non-coding (NR_136241, exon 1 of 9) non-coding (NR_136241, exon 1 of 9) 526 NR_136241 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr20-81 chr20 49835091 49835323 + 19.4 0.000 intron (NR_048539, intron 3 of 13) L1ME3G|LINE|L1 22379 NR_048539 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding chr8-602 chr8 142568352 142568584 + 19.4 0.000 Intergenic Intergenic 46011 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr3-442 chr3 89320929 89321161 + 19.4 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 213424 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr22-348 chr22 43106393 43106625 + 19.4 0.000 Intergenic Intergenic -4241 NM_001197 638 Hs.475055 NM_001197 ENSG00000100290 BIK BIP1|BP4|NBK BCL2 interacting killer protein-coding chr19-824 chr19 35693860 35694092 + 19.4 0.000 Intergenic LTR41|LTR|ERVL -10582 NM_001316902 27033 Hs.99430 NM_014383 ENSG00000011590 ZBTB32 FAXF|FAZF|Rog|TZFP|ZNF538 zinc finger and BTB domain containing 32 protein-coding chr3-845 chr3 134367352 134367584 + 19.4 0.000 TTS (NR_106885) TTS (NR_106885) 394 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr12-465 chr12 113889180 113889412 + 19.4 0.000 intron (NM_001146698, intron 21 of 24) MER20|DNA|hAT-Charlie 77029 NM_001146698 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr17-557 chr17 44212280 44212512 + 19.4 0.000 non-coding (NR_045058, exon 8 of 21) non-coding (NR_045058, exon 8 of 21) -4557 NR_106840 102465469 NR_106840 ENSG00000275107 MIR6782 hsa-mir-6782 microRNA 6782 ncRNA chrX-255 chrX 81433837 81434069 + 19.4 0.000 Intergenic L1MC5a|LINE|L1 231851 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr11-584 chr11 62543680 62543912 + 19.4 0.000 intron (NM_024060, intron 1 of 5) intron (NM_024060, intron 1 of 5) 1868 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr11-377 chr11 765893 766125 + 19.4 0.000 TTS (NM_006755) TTS (NM_006755) 11478 NM_001318818 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr12-395 chr12 15701899 15702131 + 19.4 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 87373 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr12-721 chr12 115638830 115639062 + 19.4 0.000 Intergenic Intergenic 509708 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA KI270733.1-8 KI270733.1 168004 168236 + 19.4 0.000 NA NA NA NA chr8-202 chr8 23574444 23574676 + 19.4 0.000 3' UTR (NM_001317813, exon 5 of 5) 3' UTR (NM_001317813, exon 5 of 5) 45604 NM_001317814 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr8-505 chr8 69637811 69638043 + 19.4 0.000 intron (NR_156414, intron 18 of 20) Charlie7|DNA|hAT-Charlie 45027 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr6-367 chr6 105882480 105882712 + 19.4 0.000 Intergenic Intergenic -203740 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr1-611 chr1 23122492 23122724 + 19.4 0.000 intron (NM_033631, intron 1 of 4) intron (NM_033631, intron 1 of 4) 46248 NM_033631 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding chr7-678 chr7 24025132 24025364 + 19.4 0.000 Intergenic Intergenic -258942 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr15-398 chr15 56364874 56365106 + 19.4 0.000 promoter-TSS (NM_001286449) promoter-TSS (NM_001286449) -434 NM_001286449 374618 Hs.511476 NM_198524 ENSG00000151575 TEX9 - testis expressed 9 protein-coding chr7-421 chr7 43601985 43602217 + 19.4 0.000 intron (NM_004760, intron 2 of 6) intron (NM_004760, intron 2 of 6) 18993 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr2-387 chr2 61967287 61967519 + 19.4 0.000 intron (NM_152516, intron 1 of 2) MER5C|DNA|hAT-Charlie 61761 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr16-217 chr16 807677 807909 + 19.4 0.000 intron (NM_001013638, intron 2 of 2) CpG-8900 2350 NM_001013638 388199 Hs.528461 NM_001013638 PRR25 gs64 proline rich 25 protein-coding chr10-19 chr10 17586981 17587213 + 19.4 0.000 Intergenic MER4E1|LTR|ERV1 30277 NM_014241 9200 Hs.114062 NM_014241 ENSG00000165996 HACD1 CAP|PTPLA 3-hydroxyacyl-CoA dehydratase 1 protein-coding chr15-271 chr15 63505678 63505910 + 19.4 0.000 intron (NM_001256702, intron 1 of 13) intron (NM_001256702, intron 1 of 13) 1201 NR_046342 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr6-590 chr6 125804054 125804286 + 19.4 0.000 intron (NR_126386, intron 1 of 2) intron (NR_126386, intron 1 of 2) 13210 NM_181782 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr8-321 chr8 76535439 76535671 + 19.4 0.000 Intergenic Intergenic 128901 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr22-326 chr22 20296836 20297068 + 19.4 0.000 Intergenic Intergenic 23108 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr9-708 chr9 130895464 130895696 + 19.4 0.000 intron (NM_198180, intron 2 of 2) intron (NM_198180, intron 2 of 2) 1232 NM_198180 347148 Hs.660704 NM_198180 ENSG00000188710 QRFP 26RFa|P518 pyroglutamylated RFamide peptide protein-coding chr6-494 chr6 12692975 12693207 + 19.4 0.000 Intergenic (ATAAT)n|Simple_repeat|Simple_repeat -23676 NM_001242648 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr1-457 chr1 16719832 16720064 + 19.4 0.000 intron (NR_026567, intron 1 of 10) intron (NR_026567, intron 1 of 10) 209 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr18-248 chr18 77207510 77207742 + 19.4 0.000 Intergenic Intergenic -42222 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr14-349 chr14 55150050 55150282 + 19.4 0.000 intron (NM_001146015, intron 18 of 19) intron (NM_001146015, intron 18 of 19) 13183 NR_003225 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr7-544 chr7 132082094 132082326 + 19.4 0.000 Intergenic Intergenic 171990 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr16-213 chr16 87227383 87227615 + 19.4 0.000 Intergenic Intergenic 15384 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr11-339 chr11 10375274 10375506 + 19.4 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) 67077 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr17-539 chr17 27143758 27143990 + 19.4 0.000 Intergenic Intergenic -54633 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr4-385 chr4 147772392 147772624 + 19.4 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) -10087 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr2-574 chr2 3168550 3168782 + 19.4 0.000 Intergenic Intergenic -42640 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr11-532 chr11 122174811 122175043 + 19.4 0.000 intron (NR_024430, intron 2 of 3) intron (NR_024430, intron 2 of 3) 5705 NR_137184 399959 Hs.44098 NR_024430 ENSG00000255248 MIR100HG AGD1|linc-NeD125|lncRNA-N2 mir-100-let-7a-2-mir-125b-1 cluster host gene ncRNA chr5-630 chr5 73365602 73365834 + 19.4 0.000 Intergenic Intergenic 27812 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr1-841 chr1 11330617 11330849 + 19.4 0.000 Intergenic Intergenic 57535 NM_013319 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr6-617 chr6 147869059 147869291 + 19.4 0.000 Intergenic Intergenic 360485 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr9-464 chr9 127497953 127498185 + 19.4 0.000 intron (NM_001190723, intron 23 of 24) intron (NM_001190723, intron 23 of 24) 45814 NM_001005374 90678 Hs.495188 NM_138361 ENSG00000148356 LRSAM1 CMT2P|RIFLE|TAL leucine rich repeat and sterile alpha motif containing 1 protein-coding chr5-622 chr5 68114703 68114935 + 19.4 0.000 Intergenic Intergenic -75057 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA chr10-794 chr10 114073084 114073316 + 19.4 0.000 Intergenic Intergenic 29334 NM_000684 153 Hs.99913 NM_000684 ENSG00000043591 ADRB1 ADRB1R|B1AR|BETA1AR|RHR adrenoceptor beta 1 protein-coding chr5-55 chr5 1523733 1523965 + 19.4 0.000 5' UTR (NM_024830, exon 1 of 14) 5' UTR (NM_024830, exon 1 of 14) 111 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding chr6-565 chr6 92763275 92763507 + 19.4 0.000 Intergenic MIRb|SINE|MIR 656168 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding chr21-12 chr21 7956092 7956324 + 19.4 0.000 Intergenic (CATTC)n|Satellite|Satellite -126576 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr7-455 chr7 1987125 1987357 + 19.4 0.000 intron (NM_001013837, intron 14 of 18) L2b|LINE|L2 -46670 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr3-693 chr3 8768553 8768785 + 19.4 0.000 promoter-TSS (NM_001354656) promoter-TSS (NM_001354656) 62 NM_001354656 5021 Hs.2820 NM_000916 ENSG00000180914 OXTR OT-R oxytocin receptor protein-coding chr13-346 chr13 111270808 111271040 + 19.4 0.000 intron (NM_001330597, intron 9 of 18) intron (NM_001330597, intron 9 of 18) 29750 NM_001354061 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr7-546 chr7 134788738 134788970 + 19.4 0.000 intron (NM_033157, intron 1 of 14) AluJb|SINE|Alu 9220 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-635 chr11 95692752 95692984 + 19.4 0.000 Intergenic L1P|LINE|L1 96914 NM_144664 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr2-1040 chr2 148543450 148543682 + 19.4 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -101185 NM_015630 26122 Hs.23270 NM_015630 ENSG00000135999 EPC2 EPC-LIKE enhancer of polycomb homolog 2 protein-coding chr8-357 chr8 133293826 133294058 + 19.4 0.000 intron (NM_006096, intron 1 of 15) intron (NM_006096, intron 1 of 15) 3310 NM_001135242 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr6-156 chr6 44152570 44152802 + 19.4 0.000 exon (NM_018426, exon 20 of 24) exon (NM_018426, exon 20 of 24) -6134 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr10-334 chr10 79242754 79242986 + 19.4 0.000 intron (NM_020338, intron 7 of 24) CpG -104599 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr2-651 chr2 105389071 105389303 + 19.4 0.000 intron (NM_201557, intron 1 of 5) intron (NM_201557, intron 1 of 5) 9864 NM_001039492 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chrX-48 chrX 9897797 9898029 + 19.4 0.000 intron (NM_001649, intron 4 of 9) intron (NM_001649, intron 4 of 9) -14459 NM_001320664 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr17-581 chr17 68522123 68522355 + 19.4 0.000 intron (NM_212472, intron 2 of 10) L2b|LINE|L2 6845 NM_001276290 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr4-646 chr4 149962961 149963193 + 19.4 0.000 Intergenic L1MD2|LINE|L1 -115368 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr10-607 chr10 10668079 10668311 + 19.4 0.000 intron (NM_001326317, intron 1 of 14) L1MA10|LINE|L1 126719 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo chr8-418 chr8 132672808 132673040 + 19.4 0.000 intron (NR_135907, intron 1 of 10) intron (NR_135907, intron 1 of 10) 2621 NR_135908 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding chr1-1139 chr1 109075101 109075333 + 19.4 0.000 intron (NM_005645, intron 1 of 3) L3|LINE|CR1 786 NM_005645 6884 Hs.632426 NM_005645 ENSG00000197780 TAF13 MRT60|TAF(II)18|TAF2K|TAFII-18|TAFII18 TATA-box binding protein associated factor 13 protein-coding chr3-328 chr3 127685479 127685711 + 19.4 0.000 Intergenic MER45A|DNA|hAT-Tip100 12643 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding chr16-319 chr16 66669215 66669447 + 19.4 0.000 intron (NM_181521, intron 1 of 3) L1ME1|LINE|L1 27412 NM_178818 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr12-552 chr12 131619326 131619558 + 19.4 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 28679 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr12-384 chr12 1616194 1616426 + 19.4 0.000 promoter-TSS (NM_030775) promoter-TSS (NM_030775) -746 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr1-1518 chr1 183608387 183608619 + 19.4 0.000 Intergenic MER44B|DNA|TcMar-Tigger -17589 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr12-466 chr12 114598801 114599033 + 19.4 0.000 Intergenic Intergenic 85258 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr1-931 chr1 62972703 62972935 + 19.4 0.000 Intergenic (AGG)n|Simple_repeat|Simple_repeat 38106 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chr18-245 chr18 74546890 74547122 + 19.4 0.000 intron (NM_032649, intron 1 of 11) intron (NM_032649, intron 1 of 11) 12506 NM_032649 84735 Hs.400613 NM_032649 ENSG00000150656 CNDP1 CN1|CPGL2|HsT2308 carnosine dipeptidase 1 protein-coding chr5-672 chr5 131324445 131324677 + 19.4 0.000 intron (NM_020240, intron 2 of 5) intron (NM_020240, intron 2 of 5) 60552 NM_001038702 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding chr2-880 chr2 9608034 9608266 + 19.4 0.000 intron (NM_006826, intron 2 of 5) intron (NM_006826, intron 2 of 5) 22847 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr9-491 chr9 134369755 134369987 + 19.4 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) -9424 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr3-250 chr3 114380228 114380460 + 19.4 0.000 non-coding (NR_121662, exon 6 of 7) non-coding (NR_121662, exon 6 of 7) 3298 NM_001164342 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr7-769 chr7 84025367 84025599 + 19.4 0.000 intron (NM_006080, intron 6 of 16) intron (NM_006080, intron 6 of 16) 169306 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr6-566 chr6 95616394 95616626 + 19.4 0.000 Intergenic MST-int|LTR|ERVL-MaLR 38975 NM_024641 79694 Hs.734632 NM_024641 ENSG00000172469 MANEA ENDO|hEndo mannosidase endo-alpha protein-coding chr8-356 chr8 130144475 130144707 + 19.2 0.000 intron (NM_001362925, intron 14 of 29) intron (NM_001362925, intron 14 of 29) -59823 NR_045385 100507117 Hs.106015 NR_045385 ENSG00000280543 ASAP1-IT2 - ASAP1 intronic transcript 2 ncRNA chr10-511 chr10 127883173 127883405 + 19.2 0.000 intron (NM_152311, intron 2 of 2) (GT)n|Simple_repeat|Simple_repeat 9652 NM_152311 119467 Hs.242014 NM_152311 ENSG00000180745 CLRN3 TMEM12|USH3AL1 clarin 3 protein-coding chr19-675 chr19 6274279 6274511 + 19.2 0.000 intron (NM_005934, intron 1 of 11) intron (NM_005934, intron 1 of 11) 5580 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr1-726 chr1 10938936 10939168 + 19.2 0.000 Intergenic Intergenic 27635 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr15-162 chr15 40129291 40129523 + 19.2 0.000 Intergenic SATR1|Satellite|Satellite -20528 NM_001003940 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr11-731 chr11 117421989 117422221 + 19.2 0.000 Intergenic Intergenic 94251 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr14-242 chr14 100592728 100592960 + 19.2 0.000 Intergenic Intergenic -23052 NM_020836 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr2-1082 chr2 189170971 189171203 + 19.2 0.000 intron (NM_000393, intron 1 of 53) GA-rich|Low_complexity|Low_complexity 8674 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding chr22-238 chr22 31584095 31584327 + 19.2 0.000 intron (NM_001007467, intron 13 of 32) intron (NM_001007467, intron 13 of 32) 37320 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr8-81 chr8 26465711 26465943 + 19.2 0.000 Intergenic Intergenic 48045 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 PNMA family member 2 protein-coding chr10-633 chr10 30812192 30812424 + 19.2 0.000 Intergenic Intergenic 89089 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr19-409 chr19 48970914 48971146 + 19.2 0.000 intron (NM_002103, intron 12 of 15) intron (NM_002103, intron 12 of 15) 5721 NM_000146 2512 Hs.433670 NM_000146 ENSG00000087086 FTL LFTD|NBIA3 ferritin light chain protein-coding chr1-739 chr1 29122338 29122570 + 19.2 0.000 promoter-TSS (NM_001171868) promoter-TSS (NM_001171868) 47 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr17-615 chr17 6743275 6743507 + 19.2 0.000 Intergenic L1PREC2|LINE|L1 -12056 NM_001353135 54739 Hs.441975 NM_017523 ENSG00000132530 XAF1 BIRC4BP|HSXIAPAF1|XIAPAF1 XIAP associated factor 1 protein-coding chr22-205 chr22 30196680 30196912 + 19.2 0.000 Intergenic Intergenic -42398 NR_149070 110806283 NR_149070 ENSG00000232530 LIF-AS1 Lnc-LIF-AS LIF antisense RNA 1 ncRNA chr7-511 chr7 95068769 95069001 + 19.2 0.000 intron (NM_017650, intron 2 of 15) LTR8|LTR|ERV1 158987 NM_001166163 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding chr3-570 chr3 160641837 160642069 + 19.2 0.000 Intergenic Intergenic -35207 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding chr5-354 chr5 151157658 151157890 + 19.2 0.000 promoter-TSS (NM_001155) promoter-TSS (NM_001155) 5 NM_001363114 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr5-449 chr5 147792107 147792339 + 19.2 0.000 Intergenic Intergenic -9495 NM_001270934 9832 Hs.740461 NM_014790 ENSG00000176049 JAKMIP2 JAMIP2|NECC1 janus kinase and microtubule interacting protein 2 protein-coding chr1-939 chr1 77536720 77536952 + 19.2 0.000 intron (NM_012093, intron 13 of 13) intron (NM_012093, intron 13 of 13) 145822 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr17-751 chr17 19965415 19965647 + 19.2 0.000 intron (NM_007202, intron 2 of 14) intron (NM_007202, intron 2 of 14) 12297 NM_007202 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr9-453 chr9 111867003 111867235 + 19.2 0.000 Intergenic Intergenic -29695 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr7-270 chr7 41916488 41916720 + 19.2 0.000 Intergenic Intergenic -213514 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr14-376 chr14 21498769 21499001 + 19.2 0.000 3' UTR (NM_014828, exon 9 of 9) 3' UTR (NM_014828, exon 9 of 9) 12455 NM_019852 56339 Hs.168799 NM_019852 ENSG00000165819 METTL3 IME4|M6A|MT-A70|Spo8|hMETTL3 methyltransferase like 3 protein-coding chr2-661 chr2 128691841 128692073 + 19.2 0.000 Intergenic Intergenic -172643 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr5-645 chr5 95821410 95821642 + 19.2 0.000 intron (NM_001243659, intron 1 of 2) intron (NM_001243659, intron 1 of 2) 1200 NM_001243658 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr3-431 chr3 45225227 45225459 + 19.2 0.000 exon (NM_015444, exon 1 of 1) exon (NM_015444, exon 1 of 1) 944 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr17-731 chr17 14396435 14396667 + 19.2 0.000 Intergenic Intergenic 92811 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr5-744 chr5 177370758 177370990 + 19.2 0.000 intron (NM_006480, intron 10 of 14) intron (NM_006480, intron 10 of 14) 12950 NM_001366618 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr16-181 chr16 4263813 4264045 + 19.2 0.000 intron (NM_003223, intron 1 of 6) intron (NM_003223, intron 1 of 6) 9094 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr4-371 chr4 121461347 121461579 + 19.2 0.000 Intergenic Intergenic -80445 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr9-546 chr9 130235840 130236072 + 19.2 0.000 3' UTR (NM_001128826, exon 8 of 8) 3' UTR (NM_001128826, exon 8 of 8) -5431 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr8-307 chr8 53523761 53523993 + 19.2 0.000 promoter-TSS (NR_149032) promoter-TSS (NR_149032) 88 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr1-313 chr1 45521759 45521991 + 19.2 0.000 promoter-TSS (NM_002574) promoter-TSS (NM_002574) 9 NM_181697 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding chr14-133 chr14 68942309 68942541 + 19.2 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 36877 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr20-228 chr20 43457277 43457509 + 19.2 0.000 promoter-TSS (NR_034009) promoter-TSS (NR_034009) -503 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr7-528 chr7 111091933 111092165 + 19.2 0.000 intron (NM_018334, intron 1 of 1) intron (NM_018334, intron 1 of 1) 922 NM_018334 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr1-1121 chr1 71747015 71747247 + 19.2 0.000 intron (NM_173808, intron 3 of 6) intron (NM_173808, intron 3 of 6) 89881 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr17-710 chr17 2123814 2124046 + 19.2 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -35169 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr1-389 chr1 229271050 229271282 + 19.2 0.000 promoter-TSS (NR_149312) promoter-TSS (NR_149312) -12 NR_149313 105373159 NR_149312 LOC105373159 - uncharacterized LOC105373159 ncRNA chr2-605 chr2 43221171 43221403 + 19.2 0.000 Intergenic Intergenic 5319 NM_006887 678 Hs.503093 NM_006887 ENSG00000152518 ZFP36L2 BRF2|ERF-2|ERF2|RNF162C|TIS11D ZFP36 ring finger protein like 2 protein-coding chr10-265 chr10 115093102 115093334 + 19.2 0.000 promoter-TSS (NR_074088) promoter-TSS (NR_074088) -147 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr19-475 chr19 18515246 18515478 + 19.2 0.000 intron (NM_006532, intron 1 of 11) intron (NM_006532, intron 1 of 11) 6708 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr9-584 chr9 20873458 20873690 + 19.2 0.000 intron (NM_017794, intron 20 of 45) intron (NM_017794, intron 20 of 45) 86647 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA chr2-732 chr2 232606132 232606364 + 19.2 0.000 intron (NM_001243252, intron 1 of 3) CpG 191 NM_001243252 80303 Hs.516769 NM_025202 ENSG00000115468 EFHD1 MST133|MSTP133|PP3051|SWS2 EF-hand domain family member D1 protein-coding chr6-310 chr6 311569 311801 + 19.2 0.000 intron (NR_104474, intron 2 of 5) AluY|SINE|Alu 19628 NM_020185 56940 Hs.29106 NM_020185 ENSG00000112679 DUSP22 JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX dual specificity phosphatase 22 protein-coding chr2-862 chr2 237184647 237184879 + 19.2 0.000 Intergenic Intergenic 98874 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr20-156 chr20 3013474 3013706 + 19.2 0.000 intron (NM_080841, intron 10 of 22) AluSp|SINE|Alu -30032 NM_001310220 2797 Hs.129715 NM_001501 ENSG00000125787 GNRH2 GnRH-II|LH-RHII gonadotropin releasing hormone 2 protein-coding chr3-308 chr3 197002398 197002630 + 19.2 0.000 promoter-TSS (NR_038285) promoter-TSS (NR_038285) -392 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr20-347 chr20 37040521 37040753 + 19.2 0.000 intron (NM_002895, intron 13 of 21) AluSx|SINE|Alu 55360 NM_183404 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr8-318 chr8 66453011 66453243 + 19.2 0.000 intron (NM_144650, intron 9 of 13) intron (NM_144650, intron 9 of 13) 20623 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase iron containing 1 protein-coding chr4-594 chr4 101366384 101366616 + 19.2 0.000 Intergenic L1MEg|LINE|L1 18723 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA chr7-332 chr7 117582374 117582606 + 19.2 0.000 intron (NM_000492, intron 11 of 26) intron (NM_000492, intron 11 of 26) -17814 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr12-607 chr12 34703485 34703717 + 19.2 0.000 Intergenic ALR/Alpha|Satellite|centr 681105 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr19-307 chr19 42321165 42321397 + 19.2 0.000 intron (NM_001366910, intron 13 of 14) AluSc|SINE|Alu -4354 NM_001271938 1954 Hs.132483 NM_001410 ENSG00000105429 MEGF8 C19orf49|CRPT2|EGFL4|SBP1 multiple EGF like domains 8 protein-coding chr10-114 chr10 97885497 97885729 + 19.2 0.000 intron (NM_001206528, intron 11 of 14) intron (NM_001206528, intron 11 of 14) -9716 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr14-379 chr14 23118550 23118782 + 19.2 0.000 exon (NM_001805, exon 1 of 2) exon (NM_001805, exon 1 of 2) 945 NM_001805 1053 Hs.558308 NM_001805 ENSG00000092067 CEBPE C/EBP-epsilon|CRP1 CCAAT enhancer binding protein epsilon protein-coding chr2-881 chr2 10806163 10806395 + 19.2 0.000 intron (NM_001282704, intron 3 of 14) AluJo|SINE|Alu 6506 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr4-365 chr4 99763892 99764124 + 19.2 0.000 Intergenic Intergenic -52819 NM_014395 27071 Hs.436271 NM_014395 ENSG00000070190 DAPP1 BAM32 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 protein-coding chr9-660 chr9 114968936 114969168 + 19.2 0.000 Intergenic MIR3|SINE|MIR -38457 NM_001252290 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr10-459 chr10 74148552 74148784 + 19.0 0.000 intron (NM_207012, intron 1 of 9) AluJr4|SINE|Alu 2160 NM_207012 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr1-1379 chr1 74334333 74334565 + 19.0 0.000 intron (NM_015978, intron 6 of 24) intron (NM_015978, intron 6 of 24) 99062 NM_015978 51086 Hs.480085 NM_015978 ENSG00000116783 TNNI3K CARK|CCDD TNNI3 interacting kinase protein-coding chr2-1159 chr2 239682202 239682434 + 19.0 0.000 Intergenic L1MEh|LINE|L1 -80542 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr9-537 chr9 109107496 109107728 + 19.0 0.000 intron (NM_032012, intron 2 of 17) intron (NM_032012, intron 2 of 17) 12335 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding chr1-1334 chr1 39687531 39687763 + 19.0 0.000 intron (NM_016257, intron 1 of 3) intron (NM_016257, intron 1 of 3) 3786 NM_016257 51440 Hs.743975 NM_016257 ENSG00000116983 HPCAL4 HLP4 hippocalcin like 4 protein-coding chr4-651 chr4 151653475 151653707 + 19.0 0.000 intron (NM_001109977, intron 11 of 13) MIR|SINE|MIR 107416 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr9-183 chr9 75088277 75088509 + 19.0 0.000 promoter-TSS (NM_012383) promoter-TSS (NM_012383) -121 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr3-821 chr3 113376727 113376959 + 19.0 0.000 intron (NM_001164496, intron 17 of 34) L2|LINE|L2 -27155 NR_046728 100874029 Hs.599665 NR_046728 ENSG00000243849 CFAP44-AS1 WDR52-AS1 CFAP44 antisense RNA 1 ncRNA chr6-560 chr6 84709104 84709336 + 19.0 0.000 intron (NR_125877, intron 2 of 2) intron (NR_125877, intron 2 of 2) 19762 NR_125875 102724201 Hs.667523 NR_125875 ENSG00000228290 TBX18-AS1 - TBX18 antisense RNA 1 ncRNA chr7-503 chr7 77812270 77812502 + 19.0 0.000 intron (NM_001366088, intron 1 of 11) intron (NM_001366088, intron 1 of 11) 13415 NM_001366088 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chrX-225 chrX 43958622 43958854 + 19.0 0.000 5' UTR (NM_000266, exon 2 of 3) 5' UTR (NM_000266, exon 2 of 3) 9006 NR_046631 100873919 NR_046631 ENSG00000236276 NDP-AS1 - NDP antisense RNA 1 ncRNA chr7-613 chr7 127210197 127210429 + 19.0 0.000 intron (NR_163850, intron 1 of 9) intron (NR_163850, intron 1 of 9) -4814 NR_110195 101928333 Hs.551332 NR_110194 ENSG00000236340 LOC101928333 - uncharacterized LOC101928333 ncRNA chr20-91 chr20 45419538 45419770 + 19.0 0.000 intron (NR_047695, intron 2 of 8) intron (NR_047695, intron 2 of 8) 3513 NM_001184730 51604 Hs.437388 NM_015937 ENSG00000124155 PIGT CGI-06|MCAHS3|NDAP|PNH2 phosphatidylinositol glycan anchor biosynthesis class T protein-coding chr14-172 chr14 74881874 74882106 + 19.0 0.000 promoter-TSS (NM_001933) promoter-TSS (NM_001933) 74 NM_001933 1743 Hs.525459 NM_001933 ENSG00000119689 DLST DLTS dihydrolipoamide S-succinyltransferase protein-coding chr5-603 chr5 50595349 50595581 + 19.0 0.000 Intergenic LTR37-int|LTR|ERV1 -70466 NM_001178055 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr4-450 chr4 101760909 101761141 + 19.0 0.000 Intergenic Intergenic -29582 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr15-150 chr15 75138794 75139026 + 19.0 0.000 Intergenic MER115|DNA|hAT-Tip100 -62972 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr10-723 chr10 85318072 85318304 + 19.0 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 114584 NR_120669 101929646 Hs.116129 NR_120669 LINC02647 - long intergenic non-protein coding RNA 2647 ncRNA chr5-388 chr5 43226976 43227208 + 19.0 0.000 intron (NR_072980, intron 1 of 3) AluSx|SINE|Alu 34240 NR_072980 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding chr4-579 chr4 87734352 87734584 + 19.0 0.000 Intergenic L2b|LINE|L2 -65086 NM_004967 3381 Hs.518726 NM_004967 ENSG00000029559 IBSP BNSP|BSP|BSP-II|SP-II integrin binding sialoprotein protein-coding chr16-483 chr16 982940 983172 + 19.0 0.000 intron (NM_014587, intron 1 of 2) CpG-8928 1286 NM_014587 30812 Hs.243678 NM_014587 ENSG00000005513 SOX8 - SRY-box transcription factor 8 protein-coding chr2-1161 chr2 241773660 241773892 + 19.0 0.000 Intergenic Intergenic -3046 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr11-614 chr11 69928541 69928773 + 19.0 0.000 Intergenic Intergenic -109241 NM_005247 2248 Hs.37092 NM_005247 ENSG00000186895 FGF3 HBGF-3|INT2 fibroblast growth factor 3 protein-coding chr15-346 chr15 97902557 97902789 + 19.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -28244 NR_024173 91948 Hs.130423 NR_024172 ENSG00000251209 LINC00923 - long intergenic non-protein coding RNA 923 ncRNA chr14-382 chr14 32611791 32612023 + 19.0 0.000 intron (NM_004274, intron 7 of 13) intron (NM_004274, intron 7 of 13) 282609 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr8-314 chr8 61767080 61767312 + 19.0 0.000 Intergenic Intergenic 52408 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr4-662 chr4 162848189 162848421 + 19.0 0.000 Intergenic Intergenic 245323 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr5-194 chr5 3539065 3539297 + 19.0 0.000 Intergenic Intergenic -3087 NR_033898 285577 Hs.582442 NR_033898 ENSG00000248118 LINC01019 - long intergenic non-protein coding RNA 1019 ncRNA chr6-317 chr6 3500670 3500902 + 19.0 0.000 Intergenic Intergenic -44227 NM_001286456 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr5-88 chr5 141619033 141619265 + 19.0 0.000 promoter-TSS (NM_001314007) promoter-TSS (NM_001314007) -149 NM_001079812 1729 Hs.529451 NM_005219 ENSG00000131504 DIAPH1 DFNA1|DIA1|DRF1|LFHL1|SCBMS|hDIA1 diaphanous related formin 1 protein-coding chr2-744 chr2 240231793 240232025 + 19.0 0.000 Intergenic Intergenic -91251 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr5-319 chr5 178208611 178208843 + 19.0 0.000 non-coding (NR_103508, exon 10 of 10) non-coding (NR_103508, exon 10 of 10) 4194 NM_031266 3182 Hs.591731 NM_004499 ENSG00000197451 HNRNPAB ABBP1|HNRPAB heterogeneous nuclear ribonucleoprotein A/B protein-coding chr5-437 chr5 132470178 132470410 + 19.0 0.000 intron (NR_161242, intron 3 of 3) intron (NR_161242, intron 3 of 3) 20479 NR_149068 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr19-348 chr19 587031 587263 + 19.0 0.000 Intergenic L2a|LINE|L2 -2734 NM_001194 610 Hs.124161 NM_001194 ENSG00000099822 HCN2 BCNG-2|BCNG2|HAC-1 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 protein-coding chr1-1027 chr1 208231847 208232079 + 19.0 0.000 intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 12421 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr11-943 chr11 103907954 103908186 + 19.0 0.000 3' UTR (NM_033135, exon 7 of 7) 3' UTR (NM_033135, exon 7 of 7) 58164 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr9-633 chr9 96319507 96319739 + 19.0 0.000 intron (NR_104627, intron 12 of 12) AluJb|SINE|Alu -17447 NM_000197 3293 Hs.477 NM_000197 ENSG00000130948 HSD17B3 EDH17B3|SDR12C2 hydroxysteroid 17-beta dehydrogenase 3 protein-coding chr2-365 chr2 230687631 230687863 + 19.0 0.000 Intergenic Intergenic 12782 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr19-521 chr19 5889370 5889602 + 19.0 0.000 Intergenic Intergenic 14304 NR_034166 126328 Hs.406062 NM_175614 ENSG00000174886 NDUFA11 B14.7|CI-B14.7|MC1DN14 NADH:ubiquinone oxidoreductase subunit A11 protein-coding chr14-443 chr14 83217517 83217749 + 19.0 0.000 Intergenic L1M1|LINE|L1 575001 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr7-443 chr7 132504932 132505164 + 19.0 0.000 intron (NM_181775, intron 3 of 4) intron (NM_181775, intron 3 of 4) 71422 NM_001105543 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding chr1-1110 chr1 50332030 50332262 + 19.0 0.000 Intergenic HAL1|LINE|L1 91297 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr1-851 chr1 18071747 18071979 + 19.0 0.000 intron (NR_125946, intron 2 of 2) AluYb8|SINE|Alu 6206 NR_125946 101927876 Hs.522954 NR_125946 ENSG00000261781 LINC01654 - long intergenic non-protein coding RNA 1654 ncRNA chr4-577 chr4 84967446 84967678 + 19.0 0.000 promoter-TSS (NR_152782) promoter-TSS (NR_152782) 78 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr14-414 chr14 67603233 67603465 + 19.0 0.000 Intergenic AluJb|SINE|Alu -3048 NM_001363694 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr6-395 chr6 151269856 151270088 + 19.0 0.000 intron (NM_005100, intron 2 of 4) L1MB8|LINE|L1 30005 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr1-446 chr1 6587036 6587268 + 19.0 0.000 intron (NM_001278648, intron 5 of 10) intron (NM_001278648, intron 5 of 10) 7158 NM_001278647 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr2-496 chr2 190927359 190927591 + 19.0 0.000 exon (NM_001256310, exon 12 of 15) exon (NM_001256310, exon 12 of 15) 46654 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr9-574 chr9 14221681 14221913 + 19.0 0.000 intron (NR_161383, intron 1 of 7) intron (NR_161383, intron 1 of 7) -40993 NR_161385 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr12-608 chr12 38123398 38123630 + 19.0 0.000 Intergenic MER11D|LTR|ERVK -193260 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding chr17-768 chr17 31269756 31269988 + 19.0 0.000 intron (NM_001042492, intron 36 of 57) MLT1K|LTR|ERVL-MaLR 27367 NM_002544 4974 Hs.113874 NM_002544 ENSG00000126861 OMG OMGP oligodendrocyte myelin glycoprotein protein-coding chr11-411 chr11 3217473 3217705 + 19.0 0.000 promoter-TSS (NR_027138) promoter-TSS (NR_027138) -743 NR_027138 283303 Hs.151154 NM_173590 ENSG00000236301 MRGPRG-AS1 C11orf36|HSD-40 MRGPRG antisense RNA 1 ncRNA chr1-1462 chr1 155965813 155966045 + 19.0 0.000 intron (NM_001350112, intron 4 of 21) MIRc|SINE|MIR 12246 NM_001350111 9181 Hs.743352 NM_004723 ENSG00000116584 ARHGEF2 GEF|GEF-H1|GEFH1|LFP40|NEDMHM|P40 Rho/Rac guanine nucleotide exchange factor 2 protein-coding chr1-1411 chr1 94727449 94727681 + 19.0 0.000 intron (NR_160784, intron 1 of 3) intron (NR_160784, intron 1 of 3) 18335 NR_039620 100616321 NR_039620 ENSG00000263526 MIR378G - microRNA 378g ncRNA chr5-472 chr5 172355073 172355305 + 19.0 0.000 intron (NM_001017995, intron 8 of 12) intron (NM_001017995, intron 8 of 12) 69592 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr2-747 chr2 241573661 241573893 + 19.0 0.000 3' UTR (NM_032515, exon 5 of 5) 3' UTR (NM_032515, exon 5 of 5) -14634 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr20-131 chr20 18567396 18567628 + 19.0 0.000 promoter-TSS (NM_001348957) promoter-TSS (NM_001348957) 92 NM_001348958 388789 Hs.349092 NM_001348957 ENSG00000232388 SMIM26 LINC00493 small integral membrane protein 26 protein-coding chr10-548 chr10 69802818 69803050 + 19.0 0.000 intron (NM_080801, intron 1 of 38) CpG 1028 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr5-568 chr5 10702243 10702475 + 19.0 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 58875 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr1-1032 chr1 213232086 213232318 + 19.0 0.000 exon (NM_012424, exon 10 of 15) exon (NM_012424, exon 10 of 15) 180961 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr14-195 chr14 88824313 88824545 + 19.0 0.000 promoter-TSS (NM_001366536) promoter-TSS (NM_001366536) -222 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr1-1587 chr1 224498071 224498303 + 19.0 0.000 intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 63338 NM_001322304 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr12-568 chr12 1554215 1554447 + 19.0 0.000 Intergenic Intergenic -22139 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr11-721 chr11 93800591 93800823 + 19.0 0.000 intron (NM_004268, intron 8 of 11) AluJr4|SINE|Alu 16425 NM_004268 9440 Hs.444931 NM_004268 ENSG00000042429 MED17 CRSP6|CRSP77|DRIP80|SRB4|TRAP80 mediator complex subunit 17 protein-coding chr11-538 chr11 763790 764022 + 19.0 0.000 exon (NM_006755, exon 6 of 8) exon (NM_006755, exon 6 of 8) 13581 NM_001318818 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr5-456 chr5 150774187 150774419 + 19.0 0.000 Intergenic LTR37-int|LTR|ERV1 -3643 NM_032947 85027 Hs.29444 NM_032947 ENSG00000256235 SMIM3 C5orf62|MST150|NID67 small integral membrane protein 3 protein-coding chr2-62 chr2 125615534 125615766 + 19.0 0.000 Intergenic L1PB1|LINE|L1 502335 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr10-348 chr10 110076975 110077207 + 19.0 0.000 intron (NM_001121, intron 1 of 13) intron (NM_001121, intron 1 of 13) -68710 NR_038943 100505933 Hs.604103 NR_038943 ADD3-AS1 - ADD3 antisense RNA 1 ncRNA chr8-534 chr8 96626830 96627062 + 19.0 0.000 Intergenic Intergenic -18296 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr1-1171 chr1 180200066 180200298 + 19.0 0.000 3' UTR (NM_002826, exon 12 of 12) 3' UTR (NM_002826, exon 12 of 12) -30082 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr1-1283 chr1 22528493 22528725 + 19.0 0.000 3' UTR (NM_001330398, exon 16 of 16) 3' UTR (NM_001330398, exon 16 of 16) -34880 NM_020526 2046 Hs.283613 NM_020526 ENSG00000070886 EPHA8 EEK|EK3|HEK3 EPH receptor A8 protein-coding chr5-596 chr5 38441837 38442069 + 19.0 0.000 intron (NM_182798, intron 12 of 16) intron (NM_182798, intron 12 of 16) -3593 NM_182801 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding chr19-308 chr19 43525585 43525817 + 19.0 0.000 intron (NM_001320869, intron 1 of 4) MER96|DNA|hAT-Tip100 1500 NM_014297 23474 Hs.7486 NM_014297 ENSG00000105755 ETHE1 HSCO|YF13H12 ETHE1 persulfide dioxygenase protein-coding chr1-1560 chr1 207124925 207125157 + 19.0 0.000 intron (NM_000715, intron 6 of 11) intron (NM_000715, intron 6 of 11) 20808 NM_000715 722 Hs.1012 NM_000715 ENSG00000123838 C4BPA C4BP|PRP complement component 4 binding protein alpha protein-coding chr12-282 chr12 18165615 18165847 + 19.0 0.000 Intergenic MER57-int|LTR|ERV1 -75538 NM_001286201 79785 Hs.732831 NM_024730 ENSG00000111404 RERGL - RERG like protein-coding chr7-295 chr7 105003265 105003497 + 19.0 0.000 Intergenic AluJb|SINE|Alu 10760 NR_024586 100216545 Hs.631150 NR_024586 KMT2E-AS1 - KMT2E antisense RNA 1 ncRNA chr14-247 chr14 23413446 23413678 + 19.0 0.000 intron (NM_000257, intron 39 of 39) AluSg|SINE|Alu -1888 NR_126491 104564225 NR_126491 MHRT Myheart myosin heavy chain associated RNA transcript ncRNA chr10-595 chr10 1084220 1084452 + 19.0 0.000 intron (NM_014023, intron 5 of 13) intron (NM_014023, intron 5 of 13) -27632 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr8-537 chr8 99960079 99960311 + 19.0 0.000 TTS (NM_001286693) TTS (NM_001286693) -44387 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA chr2-808 chr2 125126948 125127180 + 19.0 0.000 Intergenic L1PB1|LINE|L1 990921 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr11-779 chr11 9265306 9265538 + 19.0 0.000 promoter-TSS (NM_015213) promoter-TSS (NM_015213) -72 NM_001348749 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr19-391 chr19 32169959 32170191 + 19.0 0.000 Intergenic AluSx1|SINE|Alu -64159 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chr17-509 chr17 4304466 4304698 + 19.0 0.000 intron (NM_003342, intron 2 of 5) intron (NM_003342, intron 2 of 5) -32688 NR_110982 103021295 Hs.741319 NR_110982 LOC103021295 - uncharacterized LOC103021295 ncRNA chr7-499 chr7 75987602 75987834 + 19.0 0.000 TTS (NM_001367562) TTS (NM_001367562) 6877 NM_031925 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr17-437 chr17 77066838 77067070 + 19.0 0.000 Intergenic Intergenic -21689 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr1-1218 chr1 3331834 3332066 + 19.0 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -122715 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr8-558 chr8 119739148 119739380 + 19.0 0.000 intron (NM_003184, intron 25 of 25) intron (NM_003184, intron 25 of 25) -65874 NM_001330600 5168 Hs.190977 NM_006209 ENSG00000136960 ENPP2 ATX|ATX-X|AUTOTAXIN|LysoPLD|NPP2|PD-IALPHA|PDNP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 protein-coding chr16-553 chr16 1170136 1170368 + 19.0 0.000 intron (NM_001005407, intron 2 of 33) intron (NM_001005407, intron 2 of 33) 17011 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr18-121 chr18 13375433 13375665 + 19.0 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 51985 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr19-153 chr19 16086000 16086232 + 19.0 0.000 intron (NM_001367836, intron 3 of 8) intron (NM_001367836, intron 3 of 8) 9100 NM_001367838 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr17-749 chr17 19741005 19741237 + 19.0 0.000 exon (NM_001135167, exon 6 of 11) exon (NM_001135167, exon 6 of 11) 4338 NM_001135168 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr3-155 chr3 16060771 16061003 + 19.0 0.000 Intergenic Intergenic -113793 NM_001319051 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr18-162 chr18 50986758 50986990 + 19.0 0.000 exon (NM_018696, exon 4 of 4) exon (NM_018696, exon 4 of 4) 18834 NM_018696 55520 Hs.657360 NM_018696 ENSG00000141642 ELAC1 D29 elaC ribonuclease Z 1 protein-coding chr7-248 chr7 1086872 1087104 + 19.0 0.000 promoter-TSS (NM_001505) promoter-TSS (NM_001505) -130 NM_001505 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr2-930 chr2 43071610 43071842 + 18.8 0.000 Intergenic Intergenic 30719 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr9-525 chr9 94835793 94836025 + 18.8 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 25947 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr6-406 chr6 158002697 158002929 + 18.8 0.000 TTS (NR_046796) TTS (NR_046796) 1706 NR_046796 100874300 Hs.742238 NR_046796 ENSG00000233496 SYNJ2-IT1 - SYNJ2 intronic transcript 1 ncRNA chr12-207 chr12 30794977 30795209 + 18.8 0.000 promoter-TSS (NR_040245) promoter-TSS (NR_040245) -588 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr12-409 chr12 45357527 45357759 + 18.8 0.000 intron (NM_001025356, intron 8 of 19) intron (NM_001025356, intron 8 of 19) 64953 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr2-323 chr2 69601188 69601420 + 18.8 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) 42435 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr4-521 chr4 13483820 13484052 + 18.8 0.000 intron (NM_001017979, intron 1 of 6) CpG 404 NM_001017979 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding chr13-296 chr13 51178639 51178871 + 18.8 0.000 Intergenic Intergenic -6367 NR_102431 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding chr15-195 chr15 90158184 90158416 + 18.8 0.000 Intergenic Intergenic -26620 NM_001324029 10509 Hs.474935 NM_020210 ENSG00000185033 SEMA4B SEMAC|SemC semaphorin 4B protein-coding chr10-688 chr10 70117367 70117599 + 18.8 0.000 intron (NM_001198696, intron 6 of 8) intron (NM_001198696, intron 6 of 8) 15342 NM_032797 84883 Hs.650680 NM_032797 ENSG00000042286 AIFM2 AMID|PRG3 apoptosis inducing factor mitochondria associated 2 protein-coding chr17-877 chr17 81714334 81714566 + 18.8 0.000 intron (NM_012140, intron 1 of 10) intron (NM_012140, intron 1 of 10) 2166 NM_001270888 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr19-804 chr19 17361019 17361251 + 18.8 0.000 intron (NM_031310, intron 3 of 5) AluSq|SINE|Alu 16207 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chr3-372 chr3 76041027 76041259 + 18.8 0.000 Intergenic MamRep1151|LTR?|LTR? -255594 NM_001290210 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr9-617 chr9 87338367 87338599 + 18.8 0.000 Intergenic MER41D|LTR|ERV1 -158745 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr3-553 chr3 132421790 132422022 + 18.8 0.000 intron (NM_001329126, intron 1 of 56) MER20B|DNA|hAT-Charlie 4404 NM_001329126 23317 Hs.12707 NM_015268 ENSG00000138246 DNAJC13 PARK21|RME8 DnaJ heat shock protein family (Hsp40) member C13 protein-coding chr9-468 chr9 127844934 127845166 + 18.8 0.000 intron (NM_001114753, intron 1 of 14) intron (NM_001114753, intron 1 of 14) 2117 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr6-553 chr6 79600975 79601207 + 18.8 0.000 Intergenic Intergenic -30238 NM_031469 83699 Hs.302772 NM_031469 ENSG00000198478 SH3BGRL2 - SH3 domain binding glutamate rich protein like 2 protein-coding chr9-283 chr9 34986783 34987015 + 18.8 0.000 intron (NR_109756, intron 1 of 1) intron (NR_109756, intron 1 of 1) 2480 NR_109756 101926900 Hs.545814 NR_109756 ENSG00000281491 DNAJB5-DT DNAJB5-AS1 DNAJB5 divergent transcript ncRNA chr1-610 chr1 23100258 23100490 + 18.8 0.000 intron (NM_001142546, intron 2 of 3) intron (NM_001142546, intron 2 of 3) 56069 NR_036057 100422866 NR_036057 ENSG00000263793 MIR3115 mir-3115 microRNA 3115 ncRNA chr1-1572 chr1 217660751 217660983 + 18.8 0.000 intron (NM_138796, intron 3 of 10) intron (NM_138796, intron 3 of 10) 29523 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr10-545 chr10 58120668 58120900 + 18.8 0.000 Intergenic L1PA13|LINE|L1 147110 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr11-684 chr11 60618783 60619015 + 18.8 0.000 intron (NR_026946, intron 1 of 6) LTR13|LTR|ERVK 3148 NR_026946 283197 Hs.372650 NM_174939 ENSG00000181995 LINC00301 C11orf64|NCRNA00301 long intergenic non-protein coding RNA 301 ncRNA chr17-771 chr17 35433617 35433849 + 18.8 0.000 promoter-TSS (NM_001289009) promoter-TSS (NM_001289009) -559 NM_001289009 55106 Hs.663548 NM_018042 ENSG00000172123 SLFN12 SLFN3 schlafen family member 12 protein-coding chr9-599 chr9 35164880 35165112 + 18.8 0.000 intron (NM_006377, intron 1 of 38) CR1-L3B_Croc|LINE|CR1 2987 NM_001371189 chr12-580 chr12 6909700 6909932 + 18.8 0.000 intron (NM_001135217, intron 5 of 7) intron (NM_001135217, intron 5 of 7) -4764 NM_001975 2026 Hs.511915 NM_001975 ENSG00000111674 ENO2 HEL-S-279|NSE enolase 2 protein-coding chr10-241 chr10 28373253 28373485 + 18.8 0.000 Intergenic AluSz6|SINE|Alu -70305 NR_134518 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr5-697 chr5 139343164 139343396 + 18.8 0.000 intron (NM_001033112, intron 1 of 3) intron (NM_001033112, intron 1 of 3) 846 NM_001033112 51247 Hs.396644 NM_016480 ENSG00000120727 PAIP2 PAIP-2|PAIP2A poly(A) binding protein interacting protein 2 protein-coding chr7-321 chr7 43108483 43108715 + 18.8 0.000 Intergenic MER74B|LTR|ERVL -4048 NM_015052 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr17-527 chr17 15760235 15760467 + 18.8 0.000 Intergenic Intergenic -4352 NR_033865 644694 Hs.513966 NR_033865 CDRT15P2 CDRT15L1 CMT1A duplicated region transcript 15 pseudogene 2 pseudo chr12-537 chr12 101570149 101570381 + 18.8 0.000 Intergenic Intergenic -24666 NM_001254718 4604 Hs.654589 NM_002465 ENSG00000196091 MYBPC1 LCCS4|MYBPCC|MYBPCS myosin binding protein C, slow type protein-coding chr15-120 chr15 50353241 50353473 + 18.8 0.000 promoter-TSS (NR_024490) promoter-TSS (NR_024490) -817 NR_024490 100129387 Hs.659360 NR_024490 GABPB1-AS1 - GABPB1 antisense RNA 1 ncRNA chr11-720 chr11 93728249 93728481 + 18.8 0.000 intron (NM_033395, intron 24 of 29) intron (NM_033395, intron 24 of 29) 2281 NR_003028 684959 Hs.738736 NR_003028 ENSG00000207112 SNORA25 ACA25|SNORA25A small nucleolar RNA, H/ACA box 25 snoRNA chr11-682 chr11 45755044 45755276 + 18.8 0.000 Intergenic Intergenic -16272 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr11-952 chr11 113190241 113190473 + 18.8 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 83544 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr13-304 chr13 62443459 62443691 + 18.8 0.000 Intergenic Intergenic 119918 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr12-535 chr12 94114152 94114384 + 18.8 0.000 Intergenic AluJo|SINE|Alu -34309 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr4-618 chr4 123679555 123679787 + 18.8 0.000 intron (NR_027105, intron 3 of 5) L1MEg|LINE|L1 29680 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr1-1157 chr1 155651567 155651799 + 18.8 0.000 Intergenic HERV4_I-int|LTR|ERV1 27572 NR_132762 106633810 NR_132762 SCARNA26A - small Cajal body-specific RNA 26A ncRNA chr4-268 chr4 141236270 141236502 + 18.8 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 15491 NM_001292002 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding chr13-240 chr13 101535389 101535621 + 18.8 0.000 intron (NM_001271756, intron 1 of 9) intron (NM_001271756, intron 1 of 9) 45553 NM_001271756 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr14-218 chr14 60653183 60653415 + 18.8 0.000 Intergenic Intergenic -3822 NM_005982 6495 Hs.633506 NM_005982 ENSG00000126778 SIX1 BOS3|DFNA23|TIP39 SIX homeobox 1 protein-coding chr8-308 chr8 53932519 53932751 + 18.8 0.000 intron (NR_104579, intron 1 of 3) L1PA7|LINE|L1 51763 NR_104579 8601 Hs.368733 NM_003702 ENSG00000147509 RGS20 RGSZ1|ZGAP1|g(z)GAP|gz-GAP regulator of G protein signaling 20 protein-coding chr8-584 chr8 133162137 133162369 + 18.8 0.000 Intergenic L2b|LINE|L2 -28786 NR_037944 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr3-542 chr3 125042826 125043058 + 18.8 0.000 intron (NM_020733, intron 1 of 16) intron (NM_020733, intron 1 of 16) 13055 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr5-656 chr5 112270874 112271106 + 18.8 0.000 intron (NM_001347887, intron 4 of 23) L3|LINE|CR1 42707 NR_110559 101927023 Hs.571002 NR_110559 ENSG00000251076 LOC101927023 - uncharacterized LOC101927023 ncRNA chr12-345 chr12 31518823 31519055 + 18.8 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -70984 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chrX-192 chrX 133587371 133587603 + 18.8 0.000 intron (NM_001164619, intron 6 of 6) L1MA5A|LINE|L1 -171998 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr3-378 chr3 112649424 112649656 + 18.8 0.000 Intergenic L2c|LINE|L2 -8397 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr2-748 chr2 241660957 241661189 + 18.8 0.000 intron (NM_013325, intron 7 of 12) intron (NM_013325, intron 7 of 12) 23380 NM_013325 23192 Hs.283610 NM_013325 ENSG00000168397 ATG4B APG4B|AUTL1 autophagy related 4B cysteine peptidase protein-coding chr16-700 chr16 85851684 85851916 + 18.8 0.000 Intergenic Intergenic -47362 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr6-186 chr6 69796927 69797159 + 18.8 0.000 promoter-TSS (NM_018368) promoter-TSS (NM_018368) -33 NM_018368 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding chr9-522 chr9 86732645 86732877 + 18.8 0.000 Intergenic Intergenic 214745 NM_002048 2619 Hs.65029 NM_002048 ENSG00000180447 GAS1 - growth arrest specific 1 protein-coding chr10-4 chr10 41879331 41879563 + 18.8 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 488598 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr8-109 chr8 56074615 56074847 + 18.8 0.000 promoter-TSS (NR_002437) promoter-TSS (NR_002437) 139 NR_149110 105375847 NR_149110 ENSG00000253603 CERNA3 CTA competing endogenous lncRNA 3 for miR-645 ncRNA chr16-579 chr16 8864073 8864305 + 18.8 0.000 intron (NM_001278260, intron 1 of 4) (TGTATG)n|Simple_repeat|Simple_repeat -2379 NM_001278266 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr19-469 chr19 12495519 12495751 + 18.8 0.000 Intergenic CpG -10819 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr12-642 chr12 53985374 53985606 + 18.8 0.000 promoter-TSS (NR_047506) promoter-TSS (NR_047506) 29 NR_047506 100874365 Hs.607141 NR_047506 ENSG00000251151 HOXC-AS3 - HOXC cluster antisense RNA 3 ncRNA chrX-74 chrX 49922417 49922649 + 18.8 0.000 promoter-TSS (NM_001127898) promoter-TSS (NM_001127898) -63 NM_001127898 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr21-125 chr21 10704368 10704600 + 18.8 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 182970 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr20-149 chr20 63687513 63687745 + 18.8 0.000 intron (NR_037882, intron 16 of 37) intron (NR_037882, intron 16 of 37) -9023 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr9-755 chr9 137614616 137614848 + 18.8 0.000 TTS (NR_122036) TTS (NR_122036) 3797 NR_122036 85026 Hs.522520 NM_032937 ENSG00000203993 ARRDC1-AS1 C9orf37 ARRDC1 antisense RNA 1 ncRNA chr2-843 chr2 207617053 207617285 + 18.8 0.000 intron (NM_001330134, intron 3 of 3) intron (NM_001330134, intron 3 of 3) 7819 NM_145280 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr3-470 chr3 9214865 9215097 + 18.8 0.000 intron (NM_014850, intron 1 of 21) intron (NM_014850, intron 1 of 21) -1914 NR_103443 100288831 Hs.694646 NR_103443 ENSG00000227929 SRGAP3-AS3 - SRGAP3 antisense RNA 3 ncRNA chr17-480 chr17 62573091 62573323 + 18.8 0.000 intron (NM_001284363, intron 9 of 19) intron (NM_001284363, intron 9 of 19) -54463 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr3-597 chr3 4985830 4986062 + 18.8 0.000 TTS (NM_003670) TTS (NM_003670) -5985 NR_125915 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr3-801 chr3 79872503 79872735 + 18.8 0.000 Intergenic Intergenic -104621 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr22-177 chr22 46754562 46754794 + 18.8 0.000 Intergenic Intergenic -7939 NM_001284303 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr6-492 chr6 8955162 8955394 + 18.8 0.000 Intergenic AluSq2|SINE|Alu 303069 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr9-364 chr9 104529844 104530076 + 18.8 0.000 Intergenic Intergenic -2751 NM_001001919 138804 Hs.553601 NM_001001919 ENSG00000148136 OR13C4 HSHTPCRX17|HTPCRX17|OR2K1|OR37F|OR9-7 olfactory receptor family 13 subfamily C member 4 protein-coding chr6-491 chr6 8941502 8941734 + 18.8 0.000 Intergenic Intergenic 289409 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr11-646 chr11 118051145 118051377 + 18.8 0.000 intron (NM_001354434, intron 2 of 5) intron (NM_001354434, intron 2 of 5) -25751 NR_110734 56649 Hs.161985 NM_019894 ENSG00000137648 TMPRSS4 CAPH2|MT-SP2|TMPRSS3 transmembrane serine protease 4 protein-coding chr12-434 chr12 65649120 65649352 + 18.8 0.000 Intergenic Intergenic -6864 NR_120432 100507065 Hs.591038 NR_120431 LOC100507065 - uncharacterized LOC100507065 ncRNA chr11-622 chr11 73577778 73578010 + 18.8 0.000 intron (NM_001286051, intron 1 of 5) intron (NM_001286051, intron 1 of 5) 20218 NM_001286051 23201 Hs.475334 NM_015159 ENSG00000054965 FAM168A KIAA0280|TCRP1 family with sequence similarity 168 member A protein-coding chr8-185 chr8 21897637 21897869 + 18.6 0.000 Intergenic AluSz|SINE|Alu 15937 NM_201349 9046 Hs.71215 NM_003974 ENSG00000147443 DOK2 p56DOK|p56dok-2 docking protein 2 protein-coding chr16-207 chr16 28974083 28974315 + 18.6 0.000 promoter-TSS (NM_001142448) promoter-TSS (NM_001142448) -579 NM_001142449 83985 Hs.617449 NM_032038 ENSG00000169682 SPNS1 HSpin1|LAT|PP2030|SLC62A1|SPIN1|SPINL|nrs sphingolipid transporter 1 (putative) protein-coding chr13-324 chr13 88614274 88614506 + 18.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -12463 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA chr18-230 chr18 57881900 57882132 + 18.6 0.000 Intergenic Intergenic -78701 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr4-669 chr4 176090432 176090664 + 18.6 0.000 intron (NM_181265, intron 1 of 28) L1ME3A|LINE|L1 24707 NM_001350727 116966 Hs.532056 NM_170710 ENSG00000150627 WDR17 - WD repeat domain 17 protein-coding chr16-723 chr16 89692444 89692676 + 18.6 0.000 intron (NR_027702, intron 5 of 11) intron (NR_027702, intron 5 of 11) 5871 NM_052988 8558 Hs.699177 NM_003674 ENSG00000185324 CDK10 ALSAS|PISSLRE cyclin dependent kinase 10 protein-coding chr2-1034 chr2 136361119 136361351 + 18.6 0.000 Intergenic Intergenic -243080 NM_003467 7852 Hs.593413 NM_003467 ENSG00000121966 CXCR4 CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS C-X-C motif chemokine receptor 4 protein-coding chr13-320 chr13 80512419 80512651 + 18.6 0.000 Intergenic Intergenic -171409 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chr11-848 chr11 64896345 64896577 + 18.6 0.000 intron (NM_015104, intron 39 of 40) intron (NM_015104, intron 39 of 40) 1976 NR_106808 102466192 NR_106808 ENSG00000274986 MIR6750 hsa-mir-6750 microRNA 6750 ncRNA chr20-275 chr20 38084410 38084642 + 18.6 0.000 intron (NM_021215, intron 6 of 6) intron (NM_021215, intron 6 of 6) 50780 NM_021215 58490 Hs.278839 NM_021215 ENSG00000101413 RPRD1B C20orf77|CREPT|K-H|Kub5-Hera|NET60|dJ1057B20.2 regulation of nuclear pre-mRNA domain containing 1B protein-coding chr7-785 chr7 100412309 100412541 + 18.6 0.000 intron (NM_001258008, intron 8 of 15) L2b|LINE|L2 16278 NM_001258008 55063 Hs.105191 NM_017984 ENSG00000078487 ZCWPW1 ZCW1 zinc finger CW-type and PWWP domain containing 1 protein-coding chr1-1145 chr1 119887992 119888224 + 18.6 0.000 Intergenic L1MB2|LINE|L1 8407 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr13-119 chr13 74891691 74891923 + 18.6 0.000 Intergenic Intergenic 338964 NR_034025 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr8-579 chr8 130346479 130346711 + 18.6 0.000 intron (NM_001362925, intron 3 of 29) MIRb|SINE|MIR -50062 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr9-676 chr9 124262068 124262300 + 18.6 0.000 intron (NM_001166168, intron 1 of 9) intron (NM_001166168, intron 1 of 9) -1016 NR_149024 613206 Hs.197071 NM_001033016 ENSG00000235204 LOC613206 - uncharacterized LOC613206 ncRNA chr7-549 chr7 135521126 135521358 + 18.6 0.000 Intergenic AluJo|SINE|Alu -11115 NM_001008225 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chr11-238 chr11 126774049 126774281 + 18.6 0.000 intron (NM_001301097, intron 1 of 15) (T)n|Simple_repeat|Simple_repeat 118079 NR_120533 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr11-485 chr11 131467974 131468206 + 18.6 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 72777 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chrX-141 chrX 107823599 107823831 + 18.6 0.000 Intergenic L1MB2|LINE|L1 -2151 NM_012216 11043 Hs.12256 NM_012216 ENSG00000080561 MID2 FXY2|MRX101|RNF60|TRIM1 midline 2 protein-coding chr9-498 chr9 136286796 136287028 + 18.6 0.000 intron (NR_111982, intron 7 of 9) L1MB3|LINE|L1 17182 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr16-454 chr16 68902021 68902253 + 18.6 0.000 intron (NM_024562, intron 8 of 17) intron (NM_024562, intron 8 of 17) 58606 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr21-32 chr21 10718488 10718720 + 18.6 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 197090 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr11-776 chr11 8917480 8917712 + 18.6 0.000 intron (NR_045418, intron 3 of 3) intron (NR_045418, intron 3 of 3) 6407 NM_001206646 56672 Hs.131180 NM_020642 ENSG00000166452 AKIP1 BCA3|C11orf17 A-kinase interacting protein 1 protein-coding chr7-279 chr7 65770808 65771040 + 18.6 0.000 promoter-TSS (NR_038378) promoter-TSS (NR_038378) -114 NR_038378 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr4-501 chr4 4497151 4497383 + 18.6 0.000 intron (NM_001346282, intron 1 of 10) intron (NM_001346282, intron 1 of 10) -15567 NR_126434 104472519 Hs.691848 NR_126434 ENSG00000248221 STX18-IT1 - STX18 intronic transcript 1 ncRNA chr20-124 chr20 1326185 1326417 + 18.6 0.000 promoter-TSS (NM_001199784) promoter-TSS (NM_001199784) -432 NM_001199784 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding chr17-748 chr17 19727011 19727243 + 18.6 0.000 Intergenic Intergenic -8148 NR_135624 146802 Hs.126830 NM_152908 ENSG00000180638 SLC47A2 MATE2|MATE2-B|MATE2-K|MATE2K solute carrier family 47 member 2 protein-coding chr3-642 chr3 69762519 69762751 + 18.6 0.000 promoter-TSS (NM_001184967) promoter-TSS (NM_001184967) -869 NM_001184967 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding chr11-193 chr11 69009908 69010140 + 18.6 0.000 intron (NM_001098515, intron 1 of 2) intron (NM_001098515, intron 1 of 2) -2330 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr17-472 chr17 41446769 41447001 + 18.6 0.000 Intergenic Intergenic -5541 NM_006771 8687 Hs.248188 NM_006771 ENSG00000171360 KRT38 HA8|KRTHA8|hHa8 keratin 38 protein-coding chr11-418 chr11 9252535 9252767 + 18.6 0.000 intron (NR_145966, intron 1 of 21) AluSx|SINE|Alu 12675 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding chr11-221 chr11 62881402 62881634 + 18.6 0.000 promoter-TSS (NR_037193) promoter-TSS (NR_037193) -181 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr21-158 chr21 44006116 44006348 + 18.6 0.000 Intergenic AluJo|SINE|Alu -6077 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr7-714 chr7 47285796 47286028 + 18.6 0.000 intron (NM_022748, intron 27 of 30) intron (NM_022748, intron 27 of 30) 178891 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr9-400 chr9 12776529 12776761 + 18.6 0.000 intron (NM_203403, intron 1 of 1) intron (NM_203403, intron 1 of 1) 1625 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr22-226 chr22 44341872 44342104 + 18.6 0.000 Intergenic Intergenic -29037 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr14-303 chr14 73526628 73526860 + 18.6 0.000 intron (NM_203309, intron 1 of 16) L1M1|LINE|L1 -10399 NM_001037161 641371 Hs.446685 NM_001037161 ENSG00000184227 ACOT1 ACH2|CTE-1|LACH2 acyl-CoA thioesterase 1 protein-coding chr1-940 chr1 85330333 85330565 + 18.6 0.000 intron (NM_001134445, intron 5 of 6) intron (NM_001134445, intron 5 of 6) -53817 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr7-463 chr7 18357726 18357958 + 18.6 0.000 intron (NM_001321896, intron 1 of 12) L2b|LINE|L2 67750 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr1-1050 chr1 235983995 235984227 + 18.6 0.000 intron (NM_002508, intron 15 of 19) intron (NM_002508, intron 15 of 19) 80979 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr17-629 chr17 21293553 21293785 + 18.6 0.000 intron (NM_002756, intron 1 of 11) intron (NM_002756, intron 1 of 11) 5633 NM_002756 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr1-357 chr1 66533961 66534193 + 18.6 0.000 promoter-TSS (NM_001350217) promoter-TSS (NM_001350217) -76 NM_032291 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr3-698 chr3 11527805 11528037 + 18.6 0.000 intron (NM_001349238, intron 17 of 17) intron (NM_001349238, intron 17 of 17) 40877 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr12-583 chr12 12976428 12976660 + 18.6 0.000 intron (NM_015987, intron 3 of 3) intron (NM_015987, intron 3 of 3) -3293 NR_038920 100506314 Hs.127718 NR_038920 ENSG00000247498 GPRC5D-AS1 - GPRC5D and HEBP1 antisense RNA 1 ncRNA chr7-774 chr7 92615665 92615897 + 18.6 0.000 intron (NM_001259, intron 7 of 7) intron (NM_001259, intron 7 of 7) -25391 NM_001040057 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding chr3-525 chr3 107429471 107429703 + 18.6 0.000 Intergenic Intergenic -1343 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr15-481 chr15 99282302 99282534 + 18.6 0.000 intron (NR_135754, intron 3 of 9) L1MEc|LINE|L1 24893 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr9-640 chr9 98696467 98696699 + 18.6 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 12352 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr20-215 chr20 35663684 35663916 + 18.6 0.000 intron (NM_001198838, intron 1 of 2) intron (NM_001198838, intron 1 of 2) 1100 NM_152838 10137 Hs.700188 NM_006047 ENSG00000244462 RBM12 HRIHFB2091|SCZD19|SWAN RNA binding motif protein 12 protein-coding chr1-319 chr1 108963138 108963370 + 18.6 0.000 intron (NM_015127, intron 1 of 11) CpG 245 NM_001048210 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr12-302 chr12 57238862 57239094 + 18.6 0.000 intron (NM_020142, intron 1 of 4) CpG 1714 NM_020142 56901 Hs.75069 NM_020142 ENSG00000185633 NDUFA4L2 NUOMS NDUFA4 mitochondrial complex associated like 2 protein-coding chr3-557 chr3 135503892 135504124 + 18.6 0.000 Intergenic Intergenic -461720 NM_001190447 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr20-333 chr20 32427337 32427569 + 18.6 0.000 intron (NM_015338, intron 3 of 11) intron (NM_015338, intron 3 of 11) 56037 NM_080616 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr6-338 chr6 40948169 40948401 + 18.6 0.000 intron (NR_110873, intron 1 of 5) MER112|DNA|hAT-Charlie 74995 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr22-259 chr22 19709174 19709406 + 18.6 0.000 Intergenic Intergenic -5213 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr8-509 chr8 71544782 71545014 + 18.6 0.000 intron (NM_001370336, intron 1 of 17) L3|LINE|CR1 2806 NM_172059 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr3-515 chr3 58655552 58655784 + 18.6 0.000 intron (NM_138805, intron 1 of 9) intron (NM_138805, intron 1 of 9) 11106 NM_138805 131177 Hs.61265 NM_138805 ENSG00000198643 FAM3D EF7|OIT1 family with sequence similarity 3 member D protein-coding chr4-606 chr4 110728151 110728383 + 18.6 0.000 Intergenic Intergenic -86144 NM_153426 5308 Hs.643588 NM_000325 ENSG00000164093 PITX2 ARP1|ASGD4|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS paired like homeodomain 2 protein-coding chr16-360 chr16 56269915 56270147 + 18.6 0.000 intron (NM_138736, intron 2 of 7) intron (NM_138736, intron 2 of 7) 24511 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr8-355 chr8 129874826 129875058 + 18.6 0.000 intron (NM_001353287, intron 6 of 14) intron (NM_001353287, intron 6 of 14) 64869 NM_001353295 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr6-330 chr6 28104787 28105019 + 18.6 0.000 Intergenic CpG 14096 NR_024063 221584 Hs.634723 NR_024063 ZSCAN12P1 ZNF187p1|ZNF305P1|ZNF96L1|ZNF96P1|ZSCAN12L1|dJ313I6.7 zinc finger and SCAN domain containing 12 pseudogene 1 pseudo chr4-396 chr4 169185783 169186015 + 18.6 0.000 intron (NM_020870, intron 2 of 11) LTR85c|LTR|Gypsy? 85057 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr17-180 chr17 44968339 44968571 + 18.6 0.000 promoter-TSS (NM_006688) promoter-TSS (NM_006688) -152 NM_006688 10882 Hs.134012 NM_006688 ENSG00000131094 C1QL1 C1QRF|C1QTNF14|CRF|CTRP14 complement C1q like 1 protein-coding chr7-643 chr7 2117900 2118132 + 18.6 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -28964 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr14-324 chr14 103401539 103401771 + 18.6 0.000 intron (NM_001128920, intron 1 of 15) MLT1I|LTR|ERVL-MaLR 16240 NM_001128918 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr10-323 chr10 48304959 48305191 + 18.6 0.000 Intergenic L2b|LINE|L2 -1564 NM_001278547 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr4-114 chr4 127623072 127623304 + 18.6 0.000 Intergenic CpG -9769 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr11-413 chr11 3477125 3477357 + 18.6 0.000 Intergenic HERVE-int|LTR|ERV1 -85326 NR_044999 10821 Hs.637689 NR_044999 ENSG00000189398 OR7E12P HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 olfactory receptor family 7 subfamily E member 12 pseudogene pseudo chr6-172 chr6 147145919 147146151 + 18.6 0.000 intron (NR_034115, intron 3 of 10) intron (NR_034115, intron 3 of 10) -12890 NR_132442 106182249 Hs.575390 NR_132442 ENSG00000196634 LUADT1 - lung adenocarcinoma associated transcript 1 ncRNA chr17-570 chr17 50638928 50639160 + 18.6 0.000 intron (NM_003786, intron 1 of 30) intron (NM_003786, intron 1 of 30) 4163 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr7-830 chr7 130059512 130059744 + 18.6 0.000 Intergenic LTR16A|LTR|ERVL -8177 NM_001282190 51530 Hs.194157 NM_016478 ENSG00000091732 ZC3HC1 HSPC216|NIPA zinc finger C3HC-type containing 1 protein-coding chr6-627 chr6 156173289 156173521 + 18.6 0.000 Intergenic MER5A|DNA|hAT-Charlie -205345 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr1-339 chr1 1778324 1778556 + 18.6 0.000 promoter-TSS (NM_001353642) promoter-TSS (NM_001353642) 30 NM_001353642 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr5-536 chr5 150454671 150454903 + 18.6 0.000 Intergenic L2a|LINE|L2 -5048 NM_001025070 6208 Hs.744846 NM_005617 ENSG00000164587 RPS14 EMTB|S14 ribosomal protein S14 protein-coding chrX-168 chrX 32822450 32822682 + 18.6 0.000 intron (NM_000109, intron 5 of 78) (TA)n|Simple_repeat|Simple_repeat -181007 NR_031646 100302239 NR_031646 ENSG00000221348 MIR548F5 MIR548F-5|MIRN548F5|hsa-mir-548f-5 microRNA 548f-5 ncRNA chr9-582 chr9 20604639 20604871 + 18.6 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) 17183 NM_001286691 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr10-623 chr10 21516169 21516401 + 18.6 0.000 exon (NM_207371, exon 4 of 4) exon (NM_207371, exon 4 of 4) 9397 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr2-141 chr2 237414089 237414321 + 18.6 0.000 promoter-TSS (NM_057167) promoter-TSS (NM_057167) 2 NM_004369 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr3-768 chr3 53075285 53075517 + 18.6 0.000 Intergenic Intergenic -29328 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr5-515 chr5 115841670 115841902 + 18.6 0.000 promoter-TSS (NM_001318094) promoter-TSS (NM_001318094) -149 NM_001002924 1176 Hs.406191 NM_001284 ENSG00000177879 AP3S1 CLAPS3|Sigma3A adaptor related protein complex 3 subunit sigma 1 protein-coding chr2-830 chr2 186348830 186349062 + 18.6 0.000 Intergenic Intergenic -137314 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr17-597 chr17 81221823 81222055 + 18.6 0.000 intron (NM_001319228, intron 1 of 25) intron (NM_001319228, intron 1 of 25) 1026 NM_001009811 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr14-390 chr14 50225559 50225791 + 18.6 0.000 intron (NM_006939, intron 1 of 22) intron (NM_006939, intron 1 of 22) 5903 NM_006939 6655 Hs.291533 NM_006939 ENSG00000100485 SOS2 NS9|SOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding chr1-1520 chr1 183859757 183859989 + 18.6 0.000 intron (NM_001297669, intron 4 of 18) intron (NM_001297669, intron 4 of 18) 54753 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chr17-856 chr17 78431857 78432089 + 18.6 0.000 intron (NM_173628, intron 75 of 80) AluJb|SINE|Alu -52937 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr14-389 chr14 48748588 48748820 + 18.6 0.000 Intergenic Intergenic 837676 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr1-399 chr1 9539970 9540202 + 18.6 0.000 intron (NM_032315, intron 1 of 6) CpG 621 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr2-952 chr2 53490679 53490911 + 18.6 0.000 Intergenic Intergenic -276988 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr4-164 chr4 152106124 152106356 + 18.6 0.000 Intergenic Intergenic 5422 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr14-463 chr14 100330084 100330316 + 18.6 0.000 3' UTR (NM_001350877, exon 6 of 6) 3' UTR (NM_001350877, exon 6 of 6) 6861 NM_001350877 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr16-670 chr16 79068183 79068415 + 18.6 0.000 intron (NM_001291997, intron 7 of 7) MIRb|SINE|MIR 532438 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr1-938 chr1 75696487 75696719 + 18.6 0.000 Intergenic Intergenic -27744 NM_000016 34 Hs.445040 NM_000016 ENSG00000117054 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase medium chain protein-coding chr1-766 chr1 84427731 84427963 + 18.4 0.000 Intergenic Intergenic 19496 NM_058248 58511 Hs.129142 NM_021233 ENSG00000137976 DNASE2B DLAD deoxyribonuclease 2 beta protein-coding chr15-298 chr15 89836750 89836982 + 18.4 0.000 intron (NR_023361, intron 6 of 6) intron (NR_023361, intron 6 of 6) 13855 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr17-193 chr17 9799263 9799495 + 18.4 0.000 Intergenic AluSx1|SINE|Alu -7787 NM_001220493 201140 Hs.61684 NM_001105571 ENSG00000184544 DHRS7C SDR32C2 dehydrogenase/reductase 7C protein-coding chr5-718 chr5 150491387 150491619 + 18.4 0.000 Intergenic Intergenic -5511 NR_105061 102546298 Hs.570892 NR_105061 ENSG00000254333 NDST1-AS1 - NDST1 antisense RNA 1 ncRNA chr2-581 chr2 20451483 20451715 + 18.4 0.000 Intergenic Intergenic 4525 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr19-809 chr19 18659159 18659391 + 18.4 0.000 intron (NM_001345983, intron 1 of 2) intron (NM_001345983, intron 1 of 2) 14637 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr12-658 chr12 61906297 61906529 + 18.4 0.000 intron (NM_178539, intron 1 of 4) THE1B|LTR|ERVL-MaLR 286426 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr21-47 chr21 42525031 42525263 + 18.4 0.000 intron (NM_001320537, intron 2 of 19) MER21C|LTR|ERVL 11295 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr3-339 chr3 197216371 197216603 + 18.4 0.000 intron (NM_001366216, intron 4 of 23) MER68|LTR|ERVL -32356 NM_001204387 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr14-199 chr14 19161357 19161589 + 18.4 0.000 Intergenic Intergenic 34943 NR_160525 114004396 Hs.650463 NR_160525 LNCRNA-ATB - long noncoding RNA activated by TGF-beta ncRNA chr12-522 chr12 63668413 63668645 + 18.4 0.000 promoter-TSS (NM_173812) promoter-TSS (NM_173812) -36 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding chr2-835 chr2 195656662 195656894 + 18.4 0.000 promoter-TSS (NM_001127257) promoter-TSS (NM_001127257) -180 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr12-159 chr12 106234608 106234840 + 18.4 0.000 Intergenic Intergenic 13296 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr13-191 chr13 96232660 96232892 + 18.4 0.000 intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 141937 NM_153456 266722 Hs.171001 NM_153456 ENSG00000185352 HS6ST3 HS6ST-3 heparan sulfate 6-O-sulfotransferase 3 protein-coding chr7-612 chr7 124440196 124440428 + 18.4 0.000 Intergenic Intergenic -88216 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA chr5-298 chr5 142324254 142324486 + 18.4 0.000 promoter-TSS (NM_001293289) promoter-TSS (NM_001293289) -123 NM_001293289 81848 Hs.323308 NM_030964 ENSG00000187678 SPRY4 HH17 sprouty RTK signaling antagonist 4 protein-coding chr4-320 chr4 3123348 3123580 + 18.4 0.000 intron (NM_002111, intron 10 of 66) intron (NM_002111, intron 10 of 66) 48783 NM_002111 3064 Hs.518450 NM_002111 ENSG00000197386 HTT HD|IT15|LOMARS huntingtin protein-coding chr15-233 chr15 100114164 100114396 + 18.4 0.000 intron (NM_139057, intron 13 of 21) intron (NM_139057, intron 13 of 21) 227695 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding chr17-767 chr17 31156298 31156530 + 18.4 0.000 intron (NM_001042492, intron 2 of 57) intron (NM_001042492, intron 2 of 57) 61437 NM_001128147 4763 Hs.113577 NM_000267 ENSG00000196712 NF1 NFNS|VRNF|WSS neurofibromin 1 protein-coding chr5-279 chr5 79236506 79236738 + 18.4 0.000 5' UTR (NM_152405, exon 1 of 11) 5' UTR (NM_152405, exon 1 of 11) 491 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr15-363 chr15 40159409 40159641 + 18.4 0.000 Intergenic Intergenic -1484 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr8-457 chr8 26572342 26572574 + 18.4 0.000 intron (NM_001197293, intron 1 of 13) intron (NM_001197293, intron 1 of 13) -5487 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr18-206 chr18 31172302 31172534 + 18.4 0.000 Intergenic Intergenic -9562 NM_004948 1823 Hs.567260 NM_004948 ENSG00000134765 DSC1 CDHF1|DG2/DG3 desmocollin 1 protein-coding chr9-532 chr9 98039750 98039982 + 18.4 0.000 Intergenic LTR8|LTR|ERV1 -16866 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr4-526 chr4 16141086 16141318 + 18.4 0.000 Intergenic Intergenic -57179 NM_006017 8842 Hs.614734 NM_006017 ENSG00000007062 PROM1 AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4 prominin 1 protein-coding chr12-548 chr12 124170768 124171000 + 18.4 0.000 intron (NM_001347902, intron 3 of 4) intron (NM_001347902, intron 3 of 4) -118280 NM_181709 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr15-74 chr15 68278051 68278283 + 18.4 0.000 5' UTR (NM_015322, exon 1 of 2) 5' UTR (NM_015322, exon 1 of 2) 422 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr10-616 chr10 15294299 15294531 + 18.4 0.000 intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 76874 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding chr2-532 chr2 42132858 42133090 + 18.4 0.000 Intergenic Intergenic -36379 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr10-547 chr10 64356672 64356904 + 18.4 0.000 Intergenic Intergenic -468740 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr14-153 chr14 20723563 20723795 + 18.4 0.000 Intergenic CpG -22208 NM_006683 10876 Hs.304757 NM_006683 ENSG00000181562 EDDM3A EP3A|FAM12A|HE3-ALPHA|HE3A|HE3ALPHA|RAM1 epididymal protein 3A protein-coding chr1-1266 chr1 18286443 18286675 + 18.4 0.000 intron (NM_032880, intron 2 of 9) intron (NM_032880, intron 2 of 9) 178761 NM_032880 84966 Hs.212511 NM_032880 ENSG00000117154 IGSF21 - immunoglobin superfamily member 21 protein-coding chr21-134 chr21 31847078 31847310 + 18.4 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -25826 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding chr11-690 chr11 64409129 64409361 + 18.4 0.000 Intergenic Intergenic -39812 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr2-570 chr2 237966415 237966647 + 18.4 0.000 promoter-TSS (NR_103499) promoter-TSS (NR_103499) -414 NR_103500 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr12-376 chr12 124116858 124117090 + 18.4 0.000 intron (NM_001347902, intron 2 of 4) MER115|DNA|hAT-Tip100 143759 NM_001204299 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding chr5-552 chr5 170165 170397 + 18.4 0.000 intron (NM_052909, intron 14 of 19) intron (NM_052909, intron 14 of 19) -21214 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr8-198 chr8 21960152 21960384 + 18.4 0.000 intron (NM_015024, intron 1 of 27) MER102c|DNA|hAT-Charlie 40606 NM_001100161 23039 Hs.172685 NM_015024 ENSG00000130227 XPO7 EXP7|RANBP16 exportin 7 protein-coding chr10-680 chr10 68082884 68083116 + 18.4 0.000 Intergenic Intergenic -7717 NM_001278187 26091 Hs.51891 NM_015601 ENSG00000148634 HERC4 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 protein-coding chr20-141 chr20 36863283 36863515 + 18.4 0.000 5' UTR (NM_080627, exon 1 of 15) 5' UTR (NM_080627, exon 1 of 15) 139 NM_080627 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr11-547 chr11 8640610 8640842 + 18.4 0.000 exon (NM_014818, exon 9 of 20) exon (NM_014818, exon 9 of 20) 18110 NM_014818 9866 Hs.130836 NM_014818 ENSG00000166436 TRIM66 C11orf29|TIF1D|TIF1DELTA tripartite motif containing 66 protein-coding chr4-587 chr4 92814745 92814977 + 18.4 0.000 intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 510462 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr15-153 chr15 78800279 78800511 + 18.4 0.000 exon (NM_014272, exon 2 of 24) exon (NM_014272, exon 2 of 24) 11069 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr3-327 chr3 126654895 126655127 + 18.4 0.000 5' UTR (NM_052883, exon 1 of 16) 5' UTR (NM_052883, exon 1 of 16) 113 NM_001173513 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding chr2-597 chr2 36556993 36557225 + 18.4 0.000 intron (NM_005102, intron 6 of 7) intron (NM_005102, intron 6 of 7) 41059 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chr3-914 chr3 186791510 186791742 + 18.4 0.000 intron (NM_181573, intron 8 of 10) L2a|LINE|L2 4013 NR_002588 619568 Hs.743897 NR_002588 ENSG00000263776 SNORA4 ACA4 small nucleolar RNA, H/ACA box 4 snoRNA chr3-849 chr3 138608666 138608898 + 18.4 0.000 promoter-TSS (NM_001033030) promoter-TSS (NM_001033030) 11 NM_001033031 55179 Hs.173438 NM_018147 ENSG00000158234 FAIM FAIM1 Fas apoptotic inhibitory molecule protein-coding chr15-224 chr15 89814137 89814369 + 18.4 0.000 intron (NM_001150, intron 1 of 20) CpG 599 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr11-343 chr11 34222963 34223195 + 18.4 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 117450 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr9-542 chr9 125904580 125904812 + 18.4 0.000 intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 156513 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr6-232 chr6 107458673 107458905 + 18.4 0.000 intron (NM_020381, intron 1 of 7) intron (NM_020381, intron 1 of 7) 775 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr6-609 chr6 142313314 142313546 + 18.4 0.000 intron (NM_198569, intron 2 of 24) MER126|DNA|DNA 11423 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr1-1173 chr1 186178502 186178734 + 18.4 0.000 exon (NM_031935, exon 104 of 107) exon (NM_031935, exon 104 of 107) -117655 NM_001127709 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr15-315 chr15 43086636 43086868 + 18.4 0.000 intron (NM_174916, intron 1 of 46) L1MD|LINE|L1 19286 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr19-573 chr19 6205186 6205418 + 18.4 0.000 Intergenic L2c|LINE|L2 69635 NM_030924 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr16-362 chr16 56841397 56841629 + 18.4 0.000 intron (NM_014669, intron 20 of 21) intron (NM_014669, intron 20 of 21) -17005 NR_029680 406930 NR_029680 ENSG00000207649 MIR138-2 MIRN138-2|mir-138-2 microRNA 138-2 ncRNA chr2-678 chr2 158458333 158458565 + 18.4 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 1497 NM_003628 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr3-716 chr3 15154061 15154293 + 18.4 0.000 Intergenic Intergenic 51782 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo chr18-220 chr18 48344264 48344496 + 18.4 0.000 intron (NM_001371287, intron 1 of 5) MER5A1|DNA|hAT-Charlie 31247 NM_001371290 chr9-590 chr9 32953489 32953721 + 18.4 0.000 Intergenic MER41D|LTR|ERV1 47971 NM_001195249 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr11-678 chr11 29093516 29093748 + 18.4 0.000 Intergenic Intergenic -500781 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr11-365 chr11 102317192 102317424 + 18.4 0.000 promoter-TSS (NM_001165) promoter-TSS (NM_001165) -176 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr2-1148 chr2 237596417 237596649 + 18.2 0.000 Intergenic MER115|DNA|hAT-Tip100 -5799 NM_022449 64284 Hs.44278 NM_022449 ENSG00000124839 RAB17 - RAB17, member RAS oncogene family protein-coding chr5-650 chr5 103397969 103398201 + 18.2 0.000 Intergenic LTR79|LTR|ERVL 138661 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr12-496 chr12 7498888 7499120 + 18.2 0.000 exon (NM_004244, exon 4 of 17) exon (NM_004244, exon 4 of 17) 4773 NM_001370145 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr7-698 chr7 38118515 38118747 + 18.2 0.000 Intergenic L1PA13|LINE|L1 -59614 NM_032016 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr8-293 chr8 23400094 23400326 + 18.2 0.000 intron (NM_002318, intron 1 of 13) THE1B|LTR|ERVL-MaLR 3910 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr17-526 chr17 12729193 12729425 + 18.2 0.000 intron (NM_001146312, intron 5 of 13) intron (NM_001146312, intron 5 of 13) -23174 NR_104605 101928418 Hs.620346 NR_104605 ENSG00000227274 LOC101928418 - uncharacterized LOC101928418 ncRNA chr22-339 chr22 36184879 36185111 + 18.2 0.000 Intergenic Intergenic -18818 NM_145641 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr11-675 chr11 12086767 12086999 + 18.2 0.000 Intergenic Intergenic -23693 NM_001282668 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr12-116 chr12 46372759 46372991 + 18.2 0.000 promoter-TSS (NM_018976) promoter-TSS (NM_018976) -102 NM_001307936 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr16-163 chr16 84700144 84700376 + 18.2 0.000 intron (NR_073577, intron 1 of 11) CpG 260 NM_005153 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr3-687 chr3 4584464 4584696 + 18.2 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 91232 NM_001168272 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr3-359 chr3 46355366 46355598 + 18.2 0.000 intron (NM_001123041, intron 1 of 2) intron (NM_001123041, intron 1 of 2) 1371 NM_001123396 729230 Hs.511794 NM_001123041 ENSG00000121807 CCR2 CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R C-C motif chemokine receptor 2 protein-coding chr1-1552 chr1 205248796 205249028 + 18.2 0.000 intron (NM_001297611, intron 1 of 3) intron (NM_001297611, intron 1 of 3) 2416 NM_001297611 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr18-77 chr18 74869471 74869703 + 18.2 0.000 intron (NM_017757, intron 3 of 7) intron (NM_017757, intron 3 of 7) 238624 NM_001146189 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr4-323 chr4 4248259 4248491 + 18.2 0.000 promoter-TSS (NM_001297552) promoter-TSS (NM_001297552) -133 NM_032927 85013 Hs.12845 NM_032927 ENSG00000132406 TMEM128 - transmembrane protein 128 protein-coding chr5-372 chr5 14185457 14185689 + 18.2 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 42231 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr3-591 chr3 197302847 197303079 + 18.2 0.000 non-coding (NR_038289, exon 3 of 3) non-coding (NR_038289, exon 3 of 3) -3642 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr18-74 chr18 49399134 49399366 + 18.2 0.000 intron (NM_001353210, intron 2 of 16) L2c|LINE|L2 61395 NM_017653 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr5-370 chr5 7759501 7759733 + 18.2 0.000 intron (NM_020546, intron 16 of 24) intron (NM_020546, intron 16 of 24) 91516 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding chr9-230 chr9 123074194 123074426 + 18.2 0.000 exon (NM_012197, exon 17 of 26) exon (NM_012197, exon 17 of 26) 37333 NR_030331 693185 NR_030331 ENSG00000283941 MIR600 MIRN600|hsa-mir-600 microRNA 600 ncRNA chr6-209 chr6 35689011 35689243 + 18.2 0.000 promoter-TSS (NM_004117) promoter-TSS (NM_004117) -185 NM_001145777 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr5-295 chr5 140346436 140346668 + 18.2 0.000 promoter-TSS (NM_001945) promoter-TSS (NM_001945) 51 NM_001945 1839 Hs.799 NM_001945 ENSG00000113070 HBEGF DTR|DTS|DTSF|HEGFL heparin binding EGF like growth factor protein-coding chr10-504 chr10 124293345 124293577 + 18.2 0.000 Intergenic Intergenic 125462 NM_001322974 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr11-856 chr11 65467593 65467825 + 18.2 0.000 TTS (NR_160547) TTS (NR_160547) 12423 NR_160549 101927789 NR_160547 LOC101927789 - FAU, ubiquitin like and ribosomal protein S30 fusion pseudogene pseudo chrX-249 chrX 72344497 72344729 + 18.2 0.000 intron (NR_051952, intron 9 of 9) intron (NR_051952, intron 9 of 9) -37456 NM_001144886 4435 Hs.40403 NM_004143 ENSG00000125931 CITED1 MSG1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 protein-coding chr4-112 chr4 119213091 119213323 + 18.2 0.000 promoter-TSS (NR_125931) promoter-TSS (NR_125931) 494 NM_001371398 chr2-370 chr2 239275657 239275889 + 18.2 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -29689 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr11-495 chr11 12526854 12527086 + 18.2 0.000 intron (NM_018222, intron 12 of 12) intron (NM_018222, intron 12 of 12) -147451 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr9-759 chr9 137872681 137872913 + 18.2 0.000 intron (NR_121583, intron 3 of 3) AluSx3|SINE|Alu -4985 NM_001243812 774 Hs.495522 NM_000718 ENSG00000148408 CACNA1B BIII|CACNL1A5|CACNN|Cav2.2|DYT23 calcium voltage-gated channel subunit alpha1 B protein-coding chr15-404 chr15 60971425 60971657 + 18.2 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 257761 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr11-874 chr11 66625213 66625445 + 18.2 0.000 exon (NM_006328, exon 2 of 3) exon (NM_006328, exon 2 of 3) 8699 NM_001198836 10432 Hs.533712 NM_006328 ENSG00000239306 RBM14 COAA|PSP2|SIP|SYTIP1|TMEM137 RNA binding motif protein 14 protein-coding chr2-675 chr2 156334597 156334829 + 18.2 0.000 Intergenic CpG -1992 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr6-202 chr6 28080671 28080903 + 18.2 0.000 5' UTR (NM_003447, exon 1 of 4) 5' UTR (NM_003447, exon 1 of 4) 219 NM_003447 7718 Hs.55481 NM_003447 ENSG00000197279 ZNF165 CT53|LD65|ZSCAN7 zinc finger protein 165 protein-coding chr7-729 chr7 55081812 55082044 + 18.2 0.000 intron (NM_001346941, intron 1 of 21) MER112|DNA|hAT-Charlie -27911 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr20-209 chr20 34400880 34401112 + 18.2 0.000 intron (NM_001257138, intron 3 of 23) AluSz6|SINE|Alu 37723 NM_001324198 83737 Hs.632272 NM_031483 ENSG00000078747 ITCH ADMFD|AIF4|AIP4|NAPP1 itchy E3 ubiquitin protein ligase protein-coding chr21-89 chr21 33801691 33801923 + 18.2 0.000 intron (NM_001331010, intron 19 of 38) intron (NM_001331010, intron 19 of 38) 113997 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chrX-209 chrX 26902483 26902715 + 18.2 0.000 Intergenic L1MC5a|LINE|L1 344262 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo chr7-207 chr7 77926490 77926722 + 18.2 0.000 intron (NM_001366085, intron 9 of 10) intron (NM_001366085, intron 9 of 10) 86476 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr13-311 chr13 71551288 71551520 + 18.2 0.000 intron (NM_004392, intron 2 of 6) L1MA4|LINE|L1 315788 NM_004392 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr18-223 chr18 49788575 49788807 + 18.2 0.000 intron (NM_006111, intron 7 of 9) intron (NM_006111, intron 7 of 9) 24842 NM_006111 10449 Hs.200136 NM_006111 ENSG00000167315 ACAA2 DSAEC acetyl-CoA acyltransferase 2 protein-coding chr12-747 chr12 124588821 124589053 + 18.2 0.000 Intergenic L3|LINE|CR1 -21325 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr10-569 chr10 99854703 99854935 + 18.2 0.000 Intergenic Intergenic 59273 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr16-568 chr16 3572242 3572474 + 18.2 0.000 intron (NR_075083, intron 1 of 20) AluJo|SINE|Alu 5045 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr1-522 chr1 235867071 235867303 + 18.2 0.000 promoter-TSS (NM_000081) promoter-TSS (NM_000081) -260 NM_000081 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr4-380 chr4 140238447 140238679 + 18.2 0.000 Intergenic Intergenic -18745 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr16-657 chr16 73817652 73817884 + 18.2 0.000 Intergenic Intergenic 397753 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA chr10-562 chr10 80146039 80146271 + 18.2 0.000 TTS (NM_001331125) TTS (NM_001331125) 13425 NM_001012973 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr7-672 chr7 19117535 19117767 + 18.2 0.000 promoter-TSS (NM_000474) promoter-TSS (NM_000474) -15 NM_000474 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr4-598 chr4 107125734 107125966 + 18.2 0.000 Intergenic Intergenic -89537 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr10-493 chr10 110007722 110007954 + 18.2 0.000 promoter-TSS (NM_016824) promoter-TSS (NM_016824) -146 NM_001121 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr2-219 chr2 53786364 53786596 + 18.2 0.000 promoter-TSS (NM_001127397) promoter-TSS (NM_001127397) -451 NM_001127398 27248 Hs.438336 NM_015701 ENSG00000068912 ERLEC1 C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB endoplasmic reticulum lectin 1 protein-coding chr8-556 chr8 119151746 119151978 + 18.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR -56501 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding chr18-20 chr18 108019 108251 + 18.2 0.000 promoter-TSS (NR_033770) promoter-TSS (NR_033770) -930 NR_033770 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chr3-285 chr3 125054722 125054954 + 18.2 0.000 intron (NM_020733, intron 1 of 16) intron (NM_020733, intron 1 of 16) 1159 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr5-626 chr5 69213854 69214086 + 18.2 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -3790 NM_033281 92259 Hs.631971 NM_033281 ENSG00000134056 MRPS36 DC47|MRP-S36 mitochondrial ribosomal protein S36 protein-coding chr11-792 chr11 15364481 15364713 + 18.2 0.000 Intergenic Intergenic 215495 NM_001278314 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr10-455 chr10 71158666 71158898 + 18.2 0.000 Intergenic Intergenic -53788 NM_170744 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding chr7-534 chr7 128827657 128827889 + 18.2 0.000 Intergenic Intergenic -2633 NM_001127487 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr9-301 chr9 104747434 104747666 + 18.2 0.000 promoter-TSS (NM_001329570) promoter-TSS (NM_001329570) -133 NM_001329570 25934 Hs.530275 NM_015469 ENSG00000136783 NIPSNAP3A HSPC299|NIPSNAP4|TASSC nipsnap homolog 3A protein-coding chr3-573 chr3 169071051 169071283 + 18.2 0.000 Intergenic Intergenic 74356 NM_001366472 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr16-725 chr16 89791459 89791691 + 18.2 0.000 intron (NM_000135, intron 13 of 42) intron (NM_000135, intron 13 of 42) 25072 NM_001286167 2175 Hs.744083 NM_000135 ENSG00000187741 FANCA FA|FA-H|FA1|FAA|FACA|FAH|FANCH FA complementation group A protein-coding chr16-90 chr16 28562753 28562985 + 18.2 0.000 intron (NM_138414, intron 1 of 9) AluJb|SINE|Alu 8949 NM_138414 112869 Hs.655476 NM_138414 ENSG00000176476 SGF29 CCDC101|STAF36|TDRD29 SAGA complex associated factor 29 protein-coding chr1-1355 chr1 51793238 51793470 + 18.2 0.000 intron (NM_001101662, intron 24 of 30) intron (NM_001101662, intron 24 of 30) 43048 NR_031580 100313892 NR_031580 ENSG00000283899 MIR761 hsa-mir-761 microRNA 761 ncRNA chr14-312 chr14 87869911 87870143 + 18.2 0.000 Intergenic Intergenic 123155 NM_000153 2581 Hs.513439 NM_000153 ENSG00000054983 GALC - galactosylceramidase protein-coding chr2-842 chr2 207600212 207600444 + 18.2 0.000 non-coding (NR_135473, exon 10 of 10) non-coding (NR_135473, exon 10 of 10) 24660 NM_145280 151194 Hs.664764 NM_145280 ENSG00000144401 METTL21A FAM119A|HCA557b|HSPA-KMT methyltransferase like 21A protein-coding chr21-129 chr21 26124618 26124850 + 18.2 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) 15656 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr17-228 chr17 80866226 80866458 + 18.2 0.000 intron (NM_001163034, intron 13 of 29) L1ME1|LINE|L1 -60710 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr17-293 chr17 3585824 3586056 + 18.2 0.000 intron (NM_018727, intron 7 of 15) intron (NM_018727, intron 7 of 15) 6937 NM_080706 7442 Hs.579217 NM_018727 ENSG00000196689 TRPV1 VR1 transient receptor potential cation channel subfamily V member 1 protein-coding chr7-746 chr7 66758349 66758581 + 18.2 0.000 intron (NM_001287061, intron 1 of 8) intron (NM_001287061, intron 1 of 8) 2583 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr9-196 chr9 129174732 129174964 + 18.2 0.000 TTS (NM_203434) TTS (NM_203434) 3413 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr7-585 chr7 55947498 55947730 + 18.2 0.000 Intergenic AluSx1|SINE|Alu -4263 NM_015969 51373 Hs.44298 NM_015969 ENSG00000239789 MRPS17 HSPC011|MRP-S17|RPMS17|S17mt mitochondrial ribosomal protein S17 protein-coding chr11-516 chr11 68712397 68712629 + 18.2 0.000 intron (NM_004923, intron 8 of 9) intron (NM_004923, intron 8 of 9) 27969 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr6-347 chr6 52566084 52566316 + 18.2 0.000 intron (NM_012288, intron 1 of 10) intron (NM_012288, intron 1 of 10) 10860 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr10-576 chr10 102752608 102752840 + 18.2 0.000 intron (NM_001083913, intron 1 of 3) intron (NM_001083913, intron 1 of 3) 8776 NM_001083913 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr1-1298 chr1 27428778 27429010 + 18.2 0.000 5' UTR (NM_001201404, exon 2 of 8) 5' UTR (NM_001201404, exon 2 of 8) 36272 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chr5-523 chr5 138539982 138540214 + 18.2 0.000 intron (NM_001291975, intron 2 of 11) intron (NM_001291975, intron 2 of 11) 1613 NM_001282185 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr14-416 chr14 68944355 68944587 + 18.2 0.000 intron (NM_001102, intron 1 of 20) L2c|LINE|L2 34831 NM_001130005 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr5-210 chr5 123700738 123700970 + 18.2 0.000 Intergenic Intergenic 155437 NM_004384 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr1-1261 chr1 16721313 16721545 + 18.2 0.000 Intergenic AluY|SINE|Alu -1272 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr1-1119 chr1 58727469 58727701 + 18.2 0.000 Intergenic Intergenic -27523 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr2-1083 chr2 189328380 189328612 + 18.2 0.000 Intergenic Intergenic -112937 NM_001303096 84128 Hs.399984 NM_032168 ENSG00000115368 WDR75 NET16|UTP17 WD repeat domain 75 protein-coding chr12-705 chr12 108113558 108113790 + 18.2 0.000 Intergenic Intergenic -15614 NM_014653 9671 Hs.143591 NM_014653 ENSG00000075035 WSCD2 - WSC domain containing 2 protein-coding chr7-689 chr7 32070872 32071104 + 18.2 0.000 promoter-TSS (NM_001191056) promoter-TSS (NM_001191056) -126 NM_001191056 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr16-611 chr16 46480810 46481042 + 18.2 0.000 intron (NR_026556, intron 12 of 16) THE1D|LTR|ERVL-MaLR 88171 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr9-557 chr9 134224209 134224441 + 18.2 0.000 Intergenic Intergenic -59761 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr8-564 chr8 123971663 123971895 + 18.2 0.000 intron (NM_001039112, intron 6 of 40) intron (NM_001039112, intron 6 of 40) 69003 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA chr20-222 chr20 38586289 38586521 + 18.2 0.000 intron (NM_001018082, intron 2 of 2) intron (NM_001018082, intron 2 of 2) 5208 NR_130907 149685 Hs.368028 NM_174906 ENSG00000182035 ADIG SMAF1 adipogenin protein-coding chr7-133 chr7 5245014 5245246 + 18.2 0.000 Intergenic AluY|SINE|Alu 30861 NM_001033520 26100 Hs.122363 NM_015610 ENSG00000157954 WIPI2 ATG18B|Atg21|CGI-50|IDDSSA|WIPI-2 WD repeat domain, phosphoinositide interacting 2 protein-coding chr8-404 chr8 86912438 86912670 + 18.2 0.000 intron (NM_173538, intron 3 of 10) Tigger3b|DNA|TcMar-Tigger 46139 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr17-194 chr17 10383300 10383532 + 18.2 0.000 intron (NR_125367, intron 1 of 10) intron (NR_125367, intron 1 of 10) 284 NR_125367 100128560 Hs.661174 NR_125367 MYHAS - myosin heavy chain gene cluster antisense RNA ncRNA chr10-708 chr10 78044593 78044825 + 18.2 0.000 intron (NM_001142285, intron 4 of 4) intron (NM_001142285, intron 4 of 4) 10846 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr4-370 chr4 120461085 120461317 + 18.2 0.000 Intergenic L1PA7|LINE|L1 -394353 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr9-353 chr9 36525911 36526143 + 18.2 0.000 Intergenic Intergenic -46835 NM_001256687 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr12-388 chr12 6943833 6944065 + 18.2 0.000 promoter-TSS (NM_138425) promoter-TSS (NM_138425) -73 NM_138425 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr12-457 chr12 106369692 106369924 + 18.2 0.000 intron (NM_001160708, intron 6 of 27) MIR|SINE|MIR 11726 NM_001160708 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr6-468 chr6 152097124 152097356 + 18.2 0.000 intron (NM_001122741, intron 8 of 8) intron (NM_001122741, intron 8 of 8) 71047 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr7-478 chr7 43926508 43926740 + 18.2 0.000 promoter-TSS (NM_001077664) promoter-TSS (NM_001077664) 188 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr2-520 chr2 706598 706830 + 18.2 0.000 Intergenic L2|LINE|L2 -29308 NM_152834 129787 Hs.6729 NM_152834 ENSG00000151353 TMEM18 lncND transmembrane protein 18 protein-coding chr2-901 chr2 28750915 28751147 + 18.2 0.000 promoter-TSS (NM_002709) promoter-TSS (NM_002709) -717 NM_206876 5500 Hs.702907 NM_002709 ENSG00000213639 PPP1CB HEL-S-80p|NSLH2|PP-1B|PP1B|PP1beta|PPP1CD protein phosphatase 1 catalytic subunit beta protein-coding chr8-353 chr8 126699003 126699235 + 18.2 0.000 Intergenic L1PA16|LINE|L1 -140641 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr10-798 chr10 116662072 116662304 + 18.0 0.000 TTS (NM_001350930) TTS (NM_001350930) 7778 NM_144661 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr2-467 chr2 108652615 108652847 + 18.0 0.000 intron (NM_001193484, intron 1 of 9) L1MD2|LINE|L1 -2303 NM_001193485 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding chr7-73 chr7 74453666 74453898 + 18.0 0.000 promoter-TSS (NM_001199207) promoter-TSS (NM_001199207) -124 NM_016328 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr10-394 chr10 98879095 98879327 + 18.0 0.000 intron (NM_021828, intron 3 of 11) L2a|LINE|L2 45357 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr22-351 chr22 43802536 43802768 + 18.0 0.000 intron (NM_022785, intron 2 of 31) intron (NM_022785, intron 2 of 31) 9653 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr16-314 chr16 47461115 47461347 + 18.0 0.000 promoter-TSS (NM_000293) promoter-TSS (NM_000293) 43 NM_001305002 81533 Hs.42217 NM_030790 ENSG00000129636 ITFG1 2310047C21Rik|CDA08|LNKN-1|TIP integrin alpha FG-GAP repeat containing 1 protein-coding chr16-465 chr16 77581782 77582014 + 18.0 0.000 Intergenic Intergenic -140594 NM_001243660 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr17-433 chr17 72683888 72684120 + 18.0 0.000 intron (NM_001352692, intron 7 of 9) intron (NM_001352692, intron 7 of 9) -43532 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr6-275 chr6 45897162 45897394 + 18.0 0.000 Intergenic Intergenic 40319 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr10-741 chr10 93300862 93301094 + 18.0 0.000 Intergenic Intergenic 181356 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr6-445 chr6 80021846 80022078 + 18.0 0.000 intron (NM_003318, intron 10 of 21) LTR38|LTR|ERV1 17313 NM_003318 7272 Hs.169840 NM_003318 ENSG00000112742 TTK CT96|ESK|MPH1|MPS1|MPS1L1|PYT TTK protein kinase protein-coding chr1-1450 chr1 152906261 152906493 + 18.0 0.000 Intergenic Intergenic -2168 NM_005547 3713 Hs.516439 NM_005547 ENSG00000163207 IVL - involucrin protein-coding chr7-816 chr7 120857645 120857877 + 18.0 0.000 intron (NM_012338, intron 1 of 7) CpG 383 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding chr8-476 chr8 33637943 33638175 + 18.0 0.000 Intergenic Intergenic -37953 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr6-575 chr6 110329631 110329863 + 18.0 0.000 intron (NM_001123364, intron 1 of 4) intron (NM_001123364, intron 1 of 4) 311 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr2-1119 chr2 216318420 216318652 + 18.0 0.000 intron (NM_020814, intron 1 of 3) L2a|LINE|L2 53947 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr1-1423 chr1 111360525 111360757 + 18.0 0.000 Intergenic LTR5_Hs|LTR|ERVK 14019 NM_181643 128344 Hs.172510 NM_181643 ENSG00000173947 PIFO C1orf88|pitchfork primary cilia formation protein-coding chr10-533 chr10 15719159 15719391 + 18.0 0.000 intron (NM_001291494, intron 1 of 28) intron (NM_001291494, intron 1 of 28) 647 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr9-390 chr9 135269957 135270189 + 18.0 0.000 Intergenic (CACA)n|Simple_repeat|Simple_repeat -73176 NM_173520 157927 Hs.559511 NM_173520 C9orf62 - chromosome 9 open reading frame 62 protein-coding chr11-685 chr11 61857371 61857603 + 18.0 0.000 exon (NM_004265, exon 7 of 12) exon (NM_004265, exon 7 of 12) 20791 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr7-799 chr7 106804080 106804312 + 18.0 0.000 Intergenic L2a|LINE|L2 -61086 NM_001282427 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr2-4 chr2 89836403 89836635 + 18.0 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -198612 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr8-287 chr8 20445956 20446188 + 18.0 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -142109 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr6-316 chr6 2876651 2876883 + 18.0 0.000 promoter-TSS (NR_033851) promoter-TSS (NR_033851) -257 NR_033851 221756 Hs.8162 NM_182544 SERPINB9P1 SERPINB9P serpin family B member 9 pseudogene 1 pseudo GL000216.2-3 GL000216.2 140151 140383 + 18.0 0.000 NA NA NA NA chr11-472 chr11 94973581 94973813 + 18.0 0.000 promoter-TSS (NM_018039) promoter-TSS (NM_018039) -12 NM_018039 55693 Hs.503598 NM_018039 ENSG00000186280 KDM4D JMJD2D lysine demethylase 4D protein-coding chr11-680 chr11 34357192 34357424 + 18.0 0.000 exon (NM_145804, exon 1 of 17) exon (NM_145804, exon 1 of 17) 702 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr12-396 chr12 19235230 19235462 + 18.0 0.000 intron (NM_001256787, intron 1 of 25) intron (NM_001256787, intron 1 of 25) 30021 NM_001256787 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr13-88 chr13 21017397 21017629 + 18.0 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 44073 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr10-626 chr10 23440374 23440606 + 18.0 0.000 exon (NM_001145373, exon 1 of 1) exon (NM_001145373, exon 1 of 1) 1221 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr17-489 chr17 75096218 75096450 + 18.0 0.000 intron (NM_004695, intron 3 of 6) intron (NM_004695, intron 3 of 6) 8380 NM_001369668 9121 Hs.592095 NM_004695 ENSG00000170190 SLC16A5 MCT5|MCT6 solute carrier family 16 member 5 protein-coding chr20-245 chr20 63530018 63530250 + 18.0 0.000 exon (NM_005975, exon 7 of 8) exon (NM_005975, exon 7 of 8) 7236 NM_001256358 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr7-508 chr7 92717728 92717960 + 18.0 0.000 intron (NM_001259, intron 4 of 7) intron (NM_001259, intron 4 of 7) 116115 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr16-392 chr16 1114587 1114819 + 18.0 0.000 Intergenic Intergenic -18459 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr17-454 chr17 82592524 82592756 + 18.0 0.000 intron (NM_004514, intron 8 of 8) intron (NM_004514, intron 8 of 8) 55804 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr3-490 chr3 43996420 43996652 + 18.0 0.000 Intergenic CpG -117676 NR_029700 406929 NR_029700 ENSG00000207954 MIR138-1 MIRN138-1|mir-138-1 microRNA 138-1 ncRNA chr5-509 chr5 96149694 96149926 + 18.0 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 70672 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr6-452 chr6 108560132 108560364 + 18.0 0.000 promoter-TSS (NM_001455) promoter-TSS (NM_001455) 423 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr5-267 chr5 14144779 14145011 + 18.0 0.000 intron (NM_007118, intron 1 of 56) CpG 1553 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr10-567 chr10 95237878 95238110 + 18.0 0.000 exon (NM_020992, exon 7 of 7) exon (NM_020992, exon 7 of 7) 43794 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr1-490 chr1 115302417 115302649 + 18.0 0.000 intron (NM_002506, intron 1 of 2) intron (NM_002506, intron 1 of 2) 19499 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA chr6-171 chr6 136761533 136761765 + 18.0 0.000 intron (NM_005923, intron 1 of 29) intron (NM_005923, intron 1 of 29) -22398 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr12-40 chr12 120291145 120291377 + 18.0 0.000 TTS (NR_003137) TTS (NR_003137) 642 NR_003137 26834 NR_003137 ENSG00000202538 RNU4-2 RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c RNA, U4 small nuclear 2 snRNA chr16-259 chr16 88525149 88525381 + 18.0 0.000 intron (NR_148997, intron 2 of 3) intron (NR_148997, intron 2 of 3) 5788 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr13-352 chr13 113764508 113764740 + 18.0 0.000 intron (NM_182614, intron 1 of 8) intron (NM_182614, intron 1 of 8) 5381 NM_001348663 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr13-136 chr13 20813948 20814180 + 18.0 0.000 intron (NM_022459, intron 9 of 22) intron (NM_022459, intron 9 of 22) -40103 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr10-294 chr10 124605454 124605686 + 18.0 0.000 intron (NM_022126, intron 6 of 6) L2b|LINE|L2 -98458 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr4-420 chr4 20506823 20507055 + 18.0 0.000 intron (NM_001289135, intron 9 of 35) intron (NM_001289135, intron 9 of 35) -21336 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr2-645 chr2 100708555 100708787 + 18.0 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR 104932 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA chr1-936 chr1 67883273 67883505 + 18.0 0.000 intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) -49922 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr20-382 chr20 56636742 56636974 + 18.0 0.000 intron (NM_003222, intron 6 of 6) intron (NM_003222, intron 6 of 6) 7552 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr6-351 chr6 54053773 54054005 + 18.0 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) -6295 NR_046710 100873951 NR_046710 MLIP-AS1 - MLIP antisense RNA 1 ncRNA KI270587.1-1 KI270587.1 623 855 + 18.0 0.000 NA NA NA NA chr11-408 chr11 886408 886640 + 18.0 0.000 intron (NM_001142677, intron 7 of 11) MLT1A|LTR|ERVL-MaLR 24286 NM_023947 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chrX-107 chrX 17465639 17465871 + 18.0 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) 39874 NR_039925 100616249 NR_039925 ENSG00000265465 MIR4768 - microRNA 4768 ncRNA chr7-449 chr7 155959282 155959514 + 18.0 0.000 Intergenic (TAGCA)n|Simple_repeat|Simple_repeat -1821 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chr9-433 chr9 91887467 91887699 + 18.0 0.000 intron (NM_001318204, intron 1 of 7) L1ME3C|LINE|L1 62645 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr12-153 chr12 51425011 51425243 + 18.0 0.000 promoter-TSS (NM_001258403) promoter-TSS (NM_001258403) 10 NM_001258403 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr9-472 chr9 128204236 128204468 + 18.0 0.000 promoter-TSS (NM_001131015) promoter-TSS (NM_001131015) -130 NM_001131015 25792 Hs.212395 NM_012127 ENSG00000148337 CIZ1 LSFR1|NP94|ZNF356 CDKN1A interacting zinc finger protein 1 protein-coding chr10-495 chr10 112039483 112039715 + 18.0 0.000 Intergenic Intergenic 144166 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr1-777 chr1 107057369 107057601 + 18.0 0.000 exon (NM_018137, exon 1 of 1) exon (NM_018137, exon 1 of 1) 811 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr4-195 chr4 143559072 143559304 + 18.0 0.000 promoter-TSS (NR_003675) promoter-TSS (NR_003675) -284 NR_003675 441046 Hs.135705 NM_001011539 ENSG00000236296 GUSBP5 GYPELOC441046 GUSB pseudogene 5 pseudo chr9-398 chr9 7799633 7799865 + 18.0 0.000 promoter-TSS (NM_001318059) promoter-TSS (NM_001318059) 29 NM_001318058 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr9-524 chr9 91611832 91612064 + 18.0 0.000 Intergenic Intergenic -24303 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA chr7-832 chr7 130292749 130292981 + 18.0 0.000 promoter-TSS (NM_001163446) promoter-TSS (NM_001163446) -269 NM_016352 51200 Hs.93764 NM_016352 ENSG00000128510 CPA4 CPA3 carboxypeptidase A4 protein-coding chr11-156 chr11 65780653 65780885 + 18.0 0.000 5' UTR (NM_138368, exon 1 of 2) 5' UTR (NM_138368, exon 1 of 2) 207 NM_138368 91056 Hs.591957 NM_138368 ENSG00000254470 AP5B1 AP-5|PP1030 adaptor related protein complex 5 subunit beta 1 protein-coding chr19-697 chr19 23762904 23763136 + 18.0 0.000 promoter-TSS (NR_149350) promoter-TSS (NR_149350) 16 NR_149351 388524 Hs.560655 NM_001005472 RPSAP58 RPSA_30_1642 ribosomal protein SA pseudogene 58 protein-coding chr17-465 chr17 17075319 17075551 + 18.0 0.000 intron (NM_201274, intron 1 of 23) intron (NM_201274, intron 1 of 23) 32675 NM_015134 23164 Hs.462341 NM_015134 ENSG00000133030 MPRIP M-RIP|MRIP|RHOIP3|RIP3|p116Rip myosin phosphatase Rho interacting protein protein-coding chr14-471 chr14 102824833 102825065 + 18.0 0.000 intron (NM_001199427, intron 1 of 7) intron (NM_001199427, intron 1 of 7) 47470 NM_145725 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr2-396 chr2 126657166 126657398 + 18.0 0.000 intron (NM_016815, intron 1 of 2) intron (NM_016815, intron 1 of 2) 1124 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr2-1132 chr2 224958778 224959010 + 18.0 0.000 intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) -11845 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr10-246 chr10 46106480 46106712 + 17.8 0.000 Intergenic CpG -2899 NR_126580 653268 Hs.447454 NM_001077685 AGAP7P AGAP-7|AGAP7|CTGLF4|bA109G10.1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene pseudo chr14-448 chr14 89040628 89040860 + 17.8 0.000 Intergenic Intergenic 216093 NM_001366536 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr4-21 chr4 49640981 49641213 + 17.8 0.000 Intergenic (GAATG)n|Satellite|Satellite 654455 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-752 chr2 10382565 10382797 + 17.8 0.000 intron (NM_001258359, intron 1 of 4) intron (NM_001258359, intron 1 of 4) 13917 NM_001258359 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr10-682 chr10 68955867 68956099 + 17.8 0.000 promoter-TSS (NM_004728) promoter-TSS (NM_004728) -187 NM_004728 9188 Hs.223141 NM_004728 ENSG00000165732 DDX21 GUA|GURDB|RH-II/GU|RH-II/GuA DExD-box helicase 21 protein-coding chr3-779 chr3 60680043 60680275 + 17.8 0.000 intron (NM_001320900, intron 5 of 9) L1ME4a|LINE|L1 -62289 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr13-317 chr13 79290529 79290761 + 17.8 0.000 Intergenic Intergenic 115576 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr8-103 chr8 26577137 26577369 + 17.8 0.000 promoter-TSS (NM_001386) promoter-TSS (NM_001386) -692 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr11-619 chr11 73105371 73105603 + 17.8 0.000 intron (NM_014824, intron 2 of 19) intron (NM_014824, intron 2 of 19) 36831 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr5-312 chr5 172144633 172144865 + 17.8 0.000 intron (NM_005990, intron 2 of 18) intron (NM_005990, intron 2 of 18) 43475 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr19-450 chr19 48873079 48873311 + 17.8 0.000 intron (NM_014330, intron 1 of 2) intron (NM_014330, intron 1 of 2) 803 NM_014330 23645 Hs.631593 NM_014330 ENSG00000087074 PPP1R15A GADD34 protein phosphatase 1 regulatory subunit 15A protein-coding chr16-329 chr16 73144517 73144749 + 17.8 0.000 promoter-TSS (NM_207385) promoter-TSS (NM_207385) -186 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr9-737 chr9 135798004 135798236 + 17.8 0.000 Intergenic Intergenic 95935 NM_020822 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr4-392 chr4 157381802 157382034 + 17.8 0.000 Intergenic L2a|LINE|L2 161190 NM_000826 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr11-872 chr11 66585608 66585840 + 17.8 0.000 Intergenic AluSx|SINE|Alu 7339 NM_018219 55231 Hs.121072 NM_018219 ENSG00000182791 CCDC87 - coiled-coil domain containing 87 protein-coding chr4-411 chr4 2788181 2788413 + 17.8 0.000 Intergenic Intergenic -4788 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr9-672 chr9 123584649 123584881 + 17.8 0.000 intron (NM_001352968, intron 10 of 18) MIRb|SINE|MIR -99143 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr5-419 chr5 96068285 96068517 + 17.8 0.000 intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -10737 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA chr12-665 chr12 70031928 70032160 + 17.8 0.000 Intergenic Intergenic 206817 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr7-382 chr7 97972927 97973159 + 17.8 0.000 promoter-TSS (NR_002822) promoter-TSS (NR_002822) -685 NR_002822 389538 Hs.655977 NR_002822 CCZ1P-OR7E38P - CCZ1P-OR7E38P readthrough pseudo chr9-572 chr9 8348315 8348547 + 17.8 0.000 intron (NM_130392, intron 24 of 30) L1M6|LINE|L1 385515 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr11-746 chr11 130383615 130383847 + 17.8 0.000 intron (NR_148980, intron 2 of 6) intron (NR_148980, intron 2 of 6) 44878 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr11-659 chr11 132072186 132072418 + 17.8 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 161484 NR_147854 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr1-1427 chr1 116472526 116472758 + 17.8 0.000 intron (NR_125973, intron 2 of 3) intron (NR_125973, intron 2 of 3) 6184 NR_125972 101929023 Hs.668091 NR_125972 ENSG00000233154 LINC01762 - long intergenic non-protein coding RNA 1762 ncRNA chr13-303 chr13 58266870 58267102 + 17.8 0.000 Intergenic (CCTT)n|Simple_repeat|Simple_repeat -33869 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA chr9-629 chr9 93932409 93932641 + 17.8 0.000 Intergenic Intergenic 22830 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr18-177 chr18 2602557 2602789 + 17.8 0.000 intron (NM_006101, intron 13 of 16) intron (NM_006101, intron 13 of 16) 31116 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding chr5-561 chr5 7223030 7223262 + 17.8 0.000 Intergenic L1MEf|LINE|L1 46208 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr17-190 chr17 2771440 2771672 + 17.8 0.000 Intergenic AluSq2|SINE|Alu -5202 NM_001330058 23108 Hs.499659 NM_015085 ENSG00000132359 RAP1GAP2 GARNL4|RAP1GA3 RAP1 GTPase activating protein 2 protein-coding chr3-905 chr3 184031317 184031549 + 17.8 0.000 promoter-TSS (NM_182537) promoter-TSS (NM_182537) -111 NM_182537 200909 Hs.448004 NM_182537 ENSG00000186090 HTR3D 5HT3D 5-hydroxytryptamine receptor 3D protein-coding chr2-1052 chr2 169742343 169742575 + 17.8 0.000 intron (NM_001199290, intron 5 of 5) MIRb|SINE|MIR 8627 NM_144711 151230 Hs.655150 NM_144711 ENSG00000213160 KLHL23 DITHP kelch like family member 23 protein-coding chr13-246 chr13 114341144 114341376 + 17.8 0.000 Intergenic Intergenic -7312 NR_126391 104355150 Hs.569217 NR_126391 LINC01054 - long intergenic non-protein coding RNA 1054 ncRNA chr21-20 chr21 10692763 10692995 + 17.8 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 171365 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr5-588 chr5 34521571 34521803 + 17.8 0.000 Intergenic LTR33A|LTR|ERVL -134641 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr1-1082 chr1 13903955 13904187 + 17.8 0.000 Intergenic Intergenic 154656 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr9-361 chr9 99201198 99201430 + 17.8 0.000 Intergenic Intergenic 20628 NM_033087 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding chr8-550 chr8 111807963 111808195 + 17.8 0.000 Intergenic Intergenic 431440 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr22-318 chr22 47256817 47257049 + 17.8 0.000 Intergenic L1ME3E|LINE|L1 -88638 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr16-669 chr16 75471611 75471843 + 17.8 0.000 TTS (NM_021615) TTS (NM_021615) -6990 NM_001304998 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr1-725 chr1 9943278 9943510 + 17.8 0.000 promoter-TSS (NM_001316975) promoter-TSS (NM_001316975) -3 NM_001316974 84328 Hs.327252 NM_032368 ENSG00000162441 LZIC - leucine zipper and CTNNBIP1 domain containing protein-coding chr12-624 chr12 49021868 49022100 + 17.8 0.000 intron (NM_003482, intron 53 of 53) intron (NM_003482, intron 53 of 53) -3208 NM_001206710 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr9-357 chr9 89358375 89358607 + 17.8 0.000 intron (NM_001282688, intron 16 of 16) intron (NM_001282688, intron 16 of 16) 39640 NM_001282690 79048 Hs.59804 NM_024077 ENSG00000187742 SECISBP2 SBP2 SECIS binding protein 2 protein-coding chr1-584 chr1 1922780 1923012 + 17.8 0.000 intron (NM_001304360, intron 37 of 38) intron (NM_001304360, intron 37 of 38) -3617 NM_178545 339456 Hs.123423 NM_178545 ENSG00000178821 TMEM52 - transmembrane protein 52 protein-coding chr3-748 chr3 42591308 42591540 + 17.8 0.000 intron (NM_001370300, intron 1 of 2) AluSg|SINE|Alu 564 NM_001370300 51188 Hs.534454 NM_016305 ENSG00000008324 SS18L2 KIAA-iso SS18 like 2 protein-coding chr9-420 chr9 37187235 37187467 + 17.8 0.000 intron (NM_001289120, intron 2 of 8) MER1B|DNA|hAT-Charlie 66753 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr2-424 chr2 9287836 9288068 + 17.8 0.000 intron (NM_003887, intron 2 of 27) intron (NM_003887, intron 2 of 27) 81140 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr15-247 chr15 41545792 41546024 + 17.8 0.000 Intergenic AluSq2|SINE|Alu -1651 NM_015540 26015 Hs.371045 NM_015540 ENSG00000103932 RPAP1 - RNA polymerase II associated protein 1 protein-coding chr1-1232 chr1 8902790 8903022 + 17.8 0.000 Intergenic MER21A|LTR|ERVL 24071 NR_038351 100505975 Hs.429843 NR_038351 ENSG00000230679 ENO1-AS1 - ENO1 antisense RNA 1 ncRNA chr1-1526 chr1 191156120 191156352 + 17.8 0.000 Intergenic L1M1|LINE|L1 72262 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr20-360 chr20 41482565 41482797 + 17.8 0.000 intron (NM_032221, intron 16 of 36) intron (NM_032221, intron 16 of 36) -115863 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr5-193 chr5 176717368 176717600 + 17.8 0.000 Intergenic Intergenic -25721 NR_108030 102577424 Hs.349025 NR_108030 ENSG00000248859 LINC01574 HI-LNC12 long intergenic non-protein coding RNA 1574 ncRNA chr6-574 chr6 108651653 108651885 + 17.8 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 90852 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr17-426 chr17 65278301 65278533 + 17.8 0.000 Intergenic Intergenic 141047 NM_003835 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr4-496 chr4 2800045 2800277 + 17.8 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) 7076 NM_001122681 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr2-1025 chr2 126448789 126449021 + 17.8 0.000 Intergenic MIRc|SINE|MIR -207030 NM_016815 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr19-713 chr19 42316808 42317040 + 17.8 0.000 exon (NM_173633, exon 11 of 15) exon (NM_173633, exon 11 of 15) 3615 NM_001366910 284339 Hs.382075 NM_173633 ENSG00000167619 TMEM145 - transmembrane protein 145 protein-coding chr7-751 chr7 69406217 69406449 + 17.8 0.000 Intergenic AluJr|SINE|Alu 191291 NR_108105 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr7-817 chr7 122885635 122885867 + 17.8 0.000 intron (NM_001363400, intron 1 of 30) CpG 709 NM_001363400 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr19-737 chr19 810338 810570 + 17.8 0.000 intron (NM_002819, intron 13 of 14) intron (NM_002819, intron 13 of 14) -3130 NR_036154 100422854 NR_036154 ENSG00000263414 MIR3187 mir-3187 microRNA 3187 ncRNA chr6-569 chr6 99812552 99812784 + 17.8 0.000 Intergenic LTR88a|LTR|Gypsy? -181370 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr14-251 chr14 34699850 34700082 + 17.8 0.000 Intergenic Intergenic 13851 NM_021914 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr20-110 chr20 62876984 62877216 + 17.8 0.000 TTS (NM_001193369) TTS (NM_001193369) 5803 NR_145839 109623463 NR_145839 SNORA117 - small nucleolar RNA, H/ACA box 117 snoRNA chr2-856 chr2 231418106 231418338 + 17.8 0.000 Intergenic Intergenic 22512 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr4-553 chr4 57947794 57948026 + 17.8 0.000 Intergenic L1PA7|LINE|L1 522038 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr17-595 chr17 80859068 80859300 + 17.8 0.000 intron (NM_001163034, intron 13 of 29) intron (NM_001163034, intron 13 of 29) -53552 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr9-720 chr9 133980626 133980858 + 17.8 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 11582 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr16-261 chr16 265108 265340 + 17.8 0.000 3' UTR (NM_001284497, exon 13 of 13) 3' UTR (NM_001284497, exon 13 of 13) 10720 NM_003834 8786 Hs.65756 NM_003834 ENSG00000076344 RGS11 RS11 regulator of G protein signaling 11 protein-coding chr20-226 chr20 40689781 40690013 + 17.8 0.000 promoter-TSS (NM_005461) promoter-TSS (NM_005461) -661 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr11-692 chr11 64882621 64882853 + 17.8 0.000 Intergenic MIRc|SINE|MIR -3024 NM_001282445 10938 Hs.523774 NM_006795 ENSG00000110047 EHD1 H-PAST|HPAST1|PAST|PAST1 EH domain containing 1 protein-coding chrX-142 chrX 108268866 108269098 + 17.8 0.000 intron (NM_001287758, intron 3 of 45) intron (NM_001287758, intron 3 of 45) 169440 NM_033641 1288 Hs.145586 NM_001847 ENSG00000197565 COL4A6 CXDELq22.3|DELXq22.3|DFNX6 collagen type IV alpha 6 chain protein-coding chr6-372 chr6 112372278 112372510 + 17.8 0.000 Intergenic Intergenic 25064 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr13-137 chr13 20814475 20814707 + 17.8 0.000 intron (NM_022459, intron 9 of 22) intron (NM_022459, intron 9 of 22) -40630 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr3-713 chr3 15017156 15017388 + 17.8 0.000 intron (NM_003298, intron 5 of 14) intron (NM_003298, intron 5 of 14) 48043 NR_135247 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr8-309 chr8 54858994 54859226 + 17.8 0.000 Intergenic Intergenic -242918 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding chr3-750 chr3 43852193 43852425 + 17.8 0.000 Intergenic L1MEc|LINE|L1 -160715 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr7-219 chr7 139109634 139109866 + 17.8 0.000 promoter-TSS (NM_024625) promoter-TSS (NM_024625) -30 NM_001363491 56829 Hs.133512 NM_020119 ENSG00000105939 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 protein-coding chr4-568 chr4 74754084 74754316 + 17.8 0.000 intron (NM_001729, intron 3 of 5) intron (NM_001729, intron 3 of 5) 40323 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chr8-547 chr8 109717981 109718213 + 17.8 0.000 Intergenic Intergenic -26306 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr1-620 chr1 28029322 28029554 + 17.8 0.000 intron (NM_001282562, intron 5 of 16) intron (NM_001282562, intron 5 of 16) 59172 NM_001990 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr16-703 chr16 87201817 87202049 + 17.8 0.000 Intergenic Intergenic -10182 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr1-1527 chr1 192309192 192309424 + 17.8 0.000 Intergenic AluJb|SINE|Alu -7684 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr2-1100 chr2 202421419 202421651 + 17.8 0.000 intron (NM_001204, intron 1 of 12) intron (NM_001204, intron 1 of 12) 45208 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr1-1449 chr1 152137970 152138202 + 17.8 0.000 Intergenic Intergenic 21142 NM_001122965 126638 Hs.376144 NM_152364 ENSG00000215853 RPTN - repetin protein-coding chr12-252 chr12 52627974 52628206 + 17.8 0.000 Intergenic Intergenic -9531 NM_175068 319101 Hs.55410 NM_175068 ENSG00000186049 KRT73 IRT6IRS3|K6IRS3|KRT6IRS3 keratin 73 protein-coding chrX-229 chrX 47582203 47582435 + 17.8 0.000 promoter-TSS (NM_003254) promoter-TSS (NM_003254) -117 NM_003254 7076 Hs.522632 NM_003254 ENSG00000102265 TIMP1 CLGI|EPA|EPO|HCI|TIMP|TIMP-1 TIMP metallopeptidase inhibitor 1 protein-coding chr8-180 chr8 143934237 143934469 + 17.8 0.000 exon (NM_201380, exon 11 of 32) exon (NM_201380, exon 11 of 32) 5244 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr1-1380 chr1 74996453 74996685 + 17.8 0.000 Intergenic Intergenic -131865 NM_001001933 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr15-122 chr15 51982165 51982397 + 17.8 0.000 Intergenic Intergenic -10480 NM_001323903 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr20-229 chr20 43703560 43703792 + 17.8 0.000 intron (NM_001278610, intron 7 of 12) intron (NM_001278610, intron 7 of 12) 23326 NM_176791 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr15-207 chr15 40982875 40983107 + 17.8 0.000 non-coding (NR_104038, exon 34 of 35) non-coding (NR_104038, exon 34 of 35) 29520 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr2-584 chr2 25002438 25002670 + 17.8 0.000 intron (NR_034113, intron 2 of 2) intron (NR_034113, intron 2 of 2) 30442 NR_034113 729723 Hs.436366 NR_034113 ENSG00000224165 DNAJC27-AS1 - DNAJC27 antisense RNA 1 ncRNA chr9-219 chr9 95133020 95133252 + 17.8 0.000 intron (NM_001243744, intron 8 of 13) intron (NM_001243744, intron 8 of 13) -47042 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr4-445 chr4 85970243 85970475 + 17.8 0.000 intron (NM_031305, intron 2 of 6) L2b|LINE|L2 40343 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr11-986 chr11 130782838 130783070 + 17.8 0.000 Intergenic Intergenic 79156 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr4-523 chr4 13700571 13700803 + 17.8 0.000 intron (NR_121681, intron 2 of 3) L1PREC2|LINE|L1 45508 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr4-616 chr4 123479009 123479241 + 17.8 0.000 Intergenic Intergenic 79585 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr12-349 chr12 48388855 48389087 + 17.8 0.000 Intergenic MIRb|SINE|MIR -37725 NM_001172682 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr3-660 chr3 125949146 125949378 + 17.8 0.000 Intergenic Intergenic -12218 NM_001015050 200810 Hs.591299 NM_001015050 ENSG00000189366 ALG1L ALG1L1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like protein-coding chr14-219 chr14 60734733 60734965 + 17.8 0.000 promoter-TSS (NM_002431) promoter-TSS (NM_002431) 88 NM_001177963 4331 Hs.509523 NM_002431 ENSG00000020426 MNAT1 CAP35|MAT1|RNF66|TFB3 MNAT1 component of CDK activating kinase protein-coding chr2-786 chr2 84959323 84959555 + 17.6 0.000 Intergenic Intergenic -11722 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr5-676 chr5 132327459 132327691 + 17.6 0.000 intron (NM_003059, intron 5 of 9) MIR|SINE|MIR 33181 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr4-625 chr4 129983778 129984010 + 17.6 0.000 Intergenic Intergenic 212275 NR_151713 107986313 Hs.112740 NR_151713 ENSG00000249618 LINC02465 - long intergenic non-protein coding RNA 2465 ncRNA chr4-198 chr4 162164052 162164284 + 17.6 0.000 promoter-TSS (NM_001128427) promoter-TSS (NM_001128427) -134 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding chr17-474 chr17 47664355 47664587 + 17.6 0.000 intron (NM_002265, intron 8 of 21) intron (NM_002265, intron 8 of 21) 13406 NM_001276453 3837 Hs.532793 NM_002265 ENSG00000108424 KPNB1 IMB1|IPO1|IPOB|Impnb|NTF97 karyopherin subunit beta 1 protein-coding chr4-444 chr4 83536383 83536615 + 17.6 0.000 5' UTR (NM_032717, exon 1 of 12) 5' UTR (NM_032717, exon 1 of 12) 391 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr22-208 chr22 32622639 32622871 + 17.6 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) 147518 NM_001033024 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr1-1473 chr1 157353422 157353654 + 17.6 0.000 Intergenic Intergenic 198977 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr15-338 chr15 81079998 81080230 + 17.6 0.000 Intergenic Intergenic -54156 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr1-1047 chr1 232704739 232704971 + 17.6 0.000 Intergenic Intergenic -13216 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr4-378 chr4 130646449 130646681 + 17.6 0.000 Intergenic Intergenic 270204 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr1-1615 chr1 245166339 245166571 + 17.6 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) 11470 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr18-180 chr18 3593914 3594146 + 17.6 0.000 promoter-TSS (NR_024101) promoter-TSS (NR_024101) -84 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr7-445 chr7 139466636 139466868 + 17.6 0.000 intron (NM_198508, intron 3 of 4) HERVH-int|LTR|ERV1 16921 NM_198508 346689 Hs.17572 NM_198508 ENSG00000188883 KLRG2 CLEC15B killer cell lectin like receptor G2 protein-coding chr15-236 chr15 34450000 34450232 + 17.6 0.000 Intergenic Intergenic -12308 NR_027409 23015 Hs.182982 NM_181077 ENSG00000175265 GOLGA8A GM88|GOLGA8B golgin A8 family member A protein-coding chr22-65 chr22 37633698 37633930 + 17.6 0.000 TTS (NM_001363771) TTS (NM_001363771) -5855 NM_001350055 23616 Hs.601143 NM_018957 ENSG00000100092 SH3BP1 ARHGAP43 SH3 domain binding protein 1 protein-coding chr20-338 chr20 35241011 35241243 + 17.6 0.000 intron (NM_001355008, intron 2 of 14) L2c|LINE|L2 14437 NM_006690 10893 Hs.715494 NM_006690 ENSG00000125966 MMP24 MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5 matrix metallopeptidase 24 protein-coding chr2-878 chr2 9142856 9143088 + 17.6 0.000 Intergenic Intergenic -63793 NM_001135191 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr1-1627 chr1 247277028 247277260 + 17.6 0.000 Intergenic (GAATG)n|Satellite|Satellite 21072 NM_173858 317705 Hs.553686 NM_173858 ENSG00000197617 VN1R5 V1RL5 vomeronasal 1 receptor 5 (gene/pseudogene) protein-coding chr17-624 chr17 14302504 14302736 + 17.6 0.000 intron (NR_130138, intron 1 of 2) CpG -1120 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr19-680 chr19 8469163 8469395 + 17.6 0.000 intron (NM_001297418, intron 8 of 13) L1MB7|LINE|L1 24304 NM_005968 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chr1-1536 chr1 201559811 201560043 + 17.6 0.000 Intergenic Intergenic 40023 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo chr16-280 chr16 78505763 78505995 + 17.6 0.000 intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 406225 NM_016373 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr12-538 chr12 104286940 104287172 + 17.6 0.000 promoter-TSS (NM_001261446) promoter-TSS (NM_001261446) 24 NM_182729 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr11-937 chr11 96308977 96309209 + 17.6 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -32345 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr3-906 chr3 184335645 184335877 + 17.6 0.000 promoter-TSS (NM_001366134) promoter-TSS (NM_001366134) -165 NM_001366134 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr11-561 chr11 35139190 35139422 + 17.6 0.000 exon (NM_001202556, exon 1 of 8) exon (NM_001202556, exon 1 of 8) 135 NM_001202556 960 Hs.502328 NM_000610 ENSG00000026508 CD44 CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 CD44 molecule (Indian blood group) protein-coding chr3-809 chr3 94164748 94164980 + 17.6 0.000 Intergenic Intergenic 101803 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr16-382 chr16 88454868 88455100 + 17.6 0.000 intron (NM_153813, intron 1 of 9) CpG 1704 NM_153813 161882 Hs.632218 NM_153813 ENSG00000179588 ZFPM1 FOG|FOG1|ZC2HC11A|ZNF408|ZNF89A zinc finger protein, FOG family member 1 protein-coding chr3-455 chr3 159766634 159766866 + 17.6 0.000 intron (NR_121669, intron 2 of 2) intron (NR_121669, intron 2 of 2) 1862 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr5-579 chr5 19365702 19365934 + 17.6 0.000 Intergenic Intergenic 520454 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr11-587 chr11 62727935 62728167 + 17.6 0.000 promoter-TSS (NR_037946) promoter-TSS (NR_037946) -22 NM_001318812 283237 Hs.31704 NM_173810 ENSG00000162222 TTC9C - tetratricopeptide repeat domain 9C protein-coding chr4-116 chr4 169967923 169968155 + 17.6 0.000 intron (NR_037878, intron 1 of 4) L1MA5A|LINE|L1 7863 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr4-314 chr4 569947 570179 + 17.6 0.000 Intergenic Intergenic 6237 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chr4-476 chr4 186606549 186606781 + 17.6 0.000 intron (NM_005245, intron 16 of 26) intron (NM_005245, intron 16 of 26) -51098 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr8-561 chr8 122760320 122760552 + 17.6 0.000 Intergenic Intergenic -21219 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr11-713 chr11 75563055 75563287 + 17.6 0.000 intron (NM_001235, intron 1 of 4) intron (NM_001235, intron 1 of 4) 918 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr3-534 chr3 118828333 118828565 + 17.6 0.000 Intergenic Intergenic -17616 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA chr10-796 chr10 114837005 114837237 + 17.6 0.000 intron (NM_001135051, intron 5 of 16) AluJb|SINE|Alu 15341 NM_001135051 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding chr1-1368 chr1 63052247 63052479 + 17.6 0.000 Intergenic MIR3|SINE|MIR -39892 NR_146606 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA chrX-197 chrX 153903256 153903488 + 17.6 0.000 intron (NR_027419, intron 1 of 3) (GT)n|Simple_repeat|Simple_repeat 747 NR_027419 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr1-930 chr1 62467150 62467382 + 17.6 0.000 intron (NM_001367561, intron 48 of 49) Tigger2|DNA|TcMar-Tigger 30217 NM_003368 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr5-240 chr5 64166140 64166372 + 17.6 0.000 intron (NM_001113561, intron 1 of 7) CpG 413 NM_178532 285671 Hs.657843 NM_178532 ENSG00000164197 RNF180 RINES ring finger protein 180 protein-coding chr12-460 chr12 110825798 110826030 + 17.6 0.000 Intergenic Intergenic -21073 NM_001286244 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding chr2-487 chr2 159098700 159098932 + 17.6 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -88019 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr1-1447 chr1 151868147 151868379 + 17.6 0.000 Intergenic THE1C|LTR|ERVL-MaLR -14551 NM_182578 284486 Hs.132648 NM_182578 ENSG00000196407 THEM5 ACOT15 thioesterase superfamily member 5 protein-coding chr10-669 chr10 61628846 61629078 + 17.6 0.000 Intergenic Intergenic -33967 NM_001366908 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr1-1308 chr1 29312010 29312242 + 17.6 0.000 intron (NM_133177, intron 22 of 30) MIRb|SINE|MIR 37988 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr7-810 chr7 116542187 116542419 + 17.6 0.000 intron (NM_001753, intron 2 of 2) MER5B|DNA|hAT-Charlie 15941 NM_001172896 857 Hs.74034 NM_001753 ENSG00000105974 CAV1 BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21 caveolin 1 protein-coding chr12-520 chr12 62866838 62867070 + 17.6 0.000 intron (NM_020700, intron 1 of 9) intron (NM_020700, intron 1 of 9) 68196 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr6-461 chr6 131159479 131159711 + 17.6 0.000 intron (NM_016377, intron 2 of 7) intron (NM_016377, intron 2 of 7) 24128 NM_016377 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr20-120 chr20 53773647 53773879 + 17.6 0.000 Intergenic MER58A|DNA|hAT-Charlie 101946 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr16-679 chr16 81997725 81997957 + 17.6 0.000 3' UTR (NM_145168, exon 3 of 3) 3' UTR (NM_145168, exon 3 of 3) 13629 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding chrX-277 chrX 123859988 123860220 + 17.6 0.000 promoter-TSS (NR_037916) promoter-TSS (NR_037916) -63 NM_001167 331 Hs.356076 NM_001167 ENSG00000101966 XIAP API3|BIRC4|IAP-3|ILP1|MIHA|XLP2|hIAP-3|hIAP3 X-linked inhibitor of apoptosis protein-coding chr5-396 chr5 59923045 59923277 + 17.6 0.000 intron (NM_001165899, intron 3 of 16) L1M1|LINE|L1 -29435 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr6-403 chr6 157499146 157499378 + 17.6 0.000 intron (NM_024630, intron 1 of 8) MLT1A|LTR|ERVL-MaLR -29870 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr15-136 chr15 80059918 80060150 + 17.6 0.000 promoter-TSS (NM_001242914) promoter-TSS (NM_001242914) 104 NM_001242913 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr10-476 chr10 94193399 94193631 + 17.6 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -84721 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr4-682 chr4 187201741 187201973 + 17.6 0.000 promoter-TSS (NR_147159) promoter-TSS (NR_147159) -129 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr19-817 chr19 30373492 30373724 + 17.6 0.000 intron (NM_014717, intron 1 of 4) intron (NM_014717, intron 1 of 4) 1224 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr10-449 chr10 62049340 62049572 + 17.6 0.000 promoter-TSS (NM_001244638) promoter-TSS (NM_001244638) 99 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr1-1595 chr1 227776435 227776667 + 17.6 0.000 non-coding (NR_136657, exon 4 of 4) non-coding (NR_136657, exon 4 of 4) -39166 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr19-793 chr19 13054675 13054907 + 17.6 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 30012 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr9-517 chr9 72446133 72446365 + 17.6 0.000 Intergenic MIRb|SINE|MIR -75552 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding KI270442.1-2 KI270442.1 391756 391988 + 17.6 0.000 NA NA NA NA chr1-1416 chr1 107626669 107626901 + 17.6 0.000 intron (NM_006113, intron 20 of 26) intron (NM_006113, intron 20 of 26) 61714 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding chr1-1601 chr1 232393087 232393319 + 17.6 0.000 Intergenic Intergenic 122405 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr1-1147 chr1 146387495 146387727 + 17.6 0.000 Intergenic Intergenic 10804 NR_004421 6060 NR_004421 ENSG00000207389 RNU1-4 HSD2|HSD5|HSD6|HSD7|RNU1|RNU1D2|RNU1E2|RNU1F1|RNU1G1|RNU1G2|U1B2|U1D2|U1E2|U1F RNA, U1 small nuclear 4 snRNA chr10-803 chr10 121578457 121578689 + 17.4 0.000 intron (NM_001320658, intron 2 of 17) MER5A|DNA|hAT-Charlie 15394 NM_001144913 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr1-1220 chr1 4423012 4423244 + 17.4 0.000 non-coding (NR_027088, exon 4 of 6) non-coding (NR_027088, exon 4 of 6) 11077 NR_027088 284661 Hs.278112 NR_027088 ENSG00000235054 LINC01777 - long intergenic non-protein coding RNA 1777 ncRNA chr10-128 chr10 30349003 30349235 + 17.4 0.000 exon (NM_018109, exon 1 of 9) exon (NM_018109, exon 1 of 9) 219 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr1-1499 chr1 169539097 169539329 + 17.4 0.000 intron (NM_000130, intron 13 of 24) intron (NM_000130, intron 13 of 24) 47318 NM_000130 2153 Hs.30054 NM_000130 ENSG00000198734 F5 FVL|PCCF|RPRGL1|THPH2 coagulation factor V protein-coding chr12-316 chr12 110134937 110135169 + 17.4 0.000 intron (NR_144950, intron 6 of 18) intron (NR_144950, intron 6 of 18) 10696 NM_001143779 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr2-655 chr2 112056288 112056520 + 17.4 0.000 intron (NM_001329914, intron 1 of 18) intron (NM_001329914, intron 1 of 18) 1135 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr20-234 chr20 47336549 47336781 + 17.4 0.000 intron (NM_001281774, intron 3 of 23) intron (NM_001281774, intron 3 of 23) 15232 NM_001363741 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr3-291 chr3 138527857 138528089 + 17.4 0.000 intron (NM_001320599, intron 10 of 17) L1ME1|LINE|L1 63983 NM_001320600 80321 Hs.531962 NM_024491 ENSG00000114107 CEP70 BITE centrosomal protein 70 protein-coding chr5-671 chr5 129884128 129884360 + 17.4 0.000 Intergenic AluY|SINE|Alu -20221 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr10-615 chr10 15231116 15231348 + 17.4 0.000 intron (NM_001010924, intron 5 of 7) AluJb|SINE|Alu -62539 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr14-392 chr14 50651566 50651798 + 17.4 0.000 intron (NM_021818, intron 2 of 4) AluJr|SINE|Alu 16624 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding KI270442.1-5 KI270442.1 217309 217541 + 17.4 0.000 NA NA NA NA chr2-904 chr2 30165153 30165385 + 17.4 0.000 Intergenic Intergenic 18262 NM_001127401 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr12-718 chr12 112670911 112671143 + 17.4 0.000 intron (NM_001347952, intron 1 of 21) intron (NM_001347952, intron 1 of 21) 24149 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr1-1046 chr1 231293178 231293410 + 17.4 0.000 Intergenic Intergenic 44558 NM_175876 149371 Hs.356198 NM_175876 ENSG00000116903 EXOC8 EXO84|Exo84p|SEC84 exocyst complex component 8 protein-coding chr22-410 chr22 41271686 41271918 + 17.4 0.000 intron (NM_001317930, intron 3 of 15) MIR|SINE|MIR 14385 NM_002883 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr11-751 chr11 291145 291377 + 17.4 0.000 intron (NM_025092, intron 4 of 13) intron (NM_025092, intron 4 of 13) 2135 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chr4-290 chr4 17623465 17623697 + 17.4 0.000 intron (NM_025205, intron 3 of 3) intron (NM_025205, intron 3 of 3) 8940 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr3-439 chr3 64687777 64688009 + 17.4 0.000 5' UTR (NM_182920, exon 1 of 40) 5' UTR (NM_182920, exon 1 of 40) 107 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr16-229 chr16 28181654 28181886 + 17.4 0.000 intron (NM_015171, intron 1 of 23) intron (NM_015171, intron 1 of 23) 30195 NM_001270940 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr9-696 chr9 128145659 128145891 + 17.4 0.000 Intergenic Intergenic -3678 NM_005564 3934 Hs.204238 NM_005564 ENSG00000148346 LCN2 24p3|MSFI|NGAL|p25 lipocalin 2 protein-coding chr1-1553 chr1 205458499 205458731 + 17.4 0.000 intron (NR_148934, intron 2 of 2) intron (NR_148934, intron 2 of 2) -2529 NR_103783 101669762 Hs.666219 NR_103783 BLACAT1 LINC00912|linc-UBC1|onco-lncRNA-30 bladder cancer associated transcript 1 ncRNA chr22-216 chr22 38317340 38317572 + 17.4 0.000 promoter-TSS (NM_152221) promoter-TSS (NM_152221) -23 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr22-323 chr22 19822015 19822247 + 17.4 0.000 intron (NM_053004, intron 2 of 7) intron (NM_053004, intron 2 of 7) 32743 NM_053004 54584 Hs.105642 NM_053004 ENSG00000185838 GNB1L DGCRK3|FKSG1|GY2|WDR14|WDVCF G protein subunit beta 1 like protein-coding chr1-1146 chr1 145879284 145879516 + 17.4 0.000 intron (NM_144698, intron 1 of 13) intron (NM_144698, intron 1 of 13) 6466 NM_144698 148741 Hs.710624 NM_144698 ENSG00000198483 ANKRD35 - ankyrin repeat domain 35 protein-coding chr9-457 chr9 116166068 116166300 + 17.4 0.000 intron (NM_002581, intron 1 of 21) intron (NM_002581, intron 1 of 21) 12393 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr10-609 chr10 12459779 12460011 + 17.4 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) 70913 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr6-272 chr6 37713789 37714021 + 17.4 0.000 Intergenic L2c|LINE|L2 -16022 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr14-257 chr14 73712693 73712925 + 17.4 0.000 exon (NM_006029, exon 1 of 1) exon (NM_006029, exon 1 of 1) 1575 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr1-834 chr1 6771080 6771312 + 17.4 0.000 Intergenic Intergenic 13784 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr11-883 chr11 68314492 68314724 + 17.4 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 2017 NM_001291902 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr6-636 chr6 158760739 158760971 + 17.4 0.000 intron (NM_001242394, intron 15 of 17) intron (NM_001242394, intron 15 of 17) 3898 NR_037482 100500851 NR_037482 ENSG00000265558 MIR3918 mir-3918 microRNA 3918 ncRNA chr11-515 chr11 66346831 66347063 + 17.4 0.000 exon (NM_006876, exon 1 of 2) exon (NM_006876, exon 1 of 2) 682 NM_006876 11041 Hs.8526 NM_006876 ENSG00000174684 B4GAT1 B3GN-T1|B3GNT1|B3GNT6|BETA3GNTI|MDDGA13|iGAT|iGNT beta-1,4-glucuronyltransferase 1 protein-coding chr7-418 chr7 32474802 32475034 + 17.4 0.000 Intergenic L1MC5a|LINE|L1 15462 NR_024466 23658 Hs.424908 NM_012322 ENSG00000106355 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr4-263 chr4 118424162 118424394 + 17.4 0.000 Intergenic Intergenic -71275 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr12-448 chr12 100706087 100706319 + 17.4 0.000 Intergenic Intergenic -88573 NM_178826 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr17-679 chr17 77366404 77366636 + 17.4 0.000 intron (NM_006640, intron 1 of 10) intron (NM_006640, intron 1 of 10) -6817 NM_001113493 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr6-274 chr6 44234818 44235050 + 17.4 0.000 TTS (NM_001078175) TTS (NM_001078175) -11232 NM_001271970 3326 Hs.509736 NM_007355 ENSG00000096384 HSP90AB1 D6S182|HSP84|HSP90B|HSPC2|HSPCB heat shock protein 90 alpha family class B member 1 protein-coding chr5-632 chr5 73719651 73719883 + 17.4 0.000 intron (NM_001177693, intron 2 of 35) intron (NM_001177693, intron 2 of 35) 93609 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr12-482 chr12 127230861 127231093 + 17.4 0.000 Intergenic LTR8|LTR|ERV1 53306 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr1-1543 chr1 202658638 202658870 + 17.4 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) -15301 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr2-294 chr2 241216031 241216263 + 17.4 0.000 exon (NM_001370694, exon 19 of 25) exon (NM_001370694, exon 19 of 25) 27470 NM_001001666 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr4-350 chr4 72375431 72375663 + 17.4 0.000 intron (NM_014243, intron 4 of 21) L2c|LINE|L2 193674 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding chr7-292 chr7 100957851 100958083 + 17.4 0.000 exon (NM_005960, exon 2 of 12) exon (NM_005960, exon 2 of 12) 8433 NM_005960 4584 Hs.703577 NM_005960 ENSG00000169894 MUC3A MUC-3A|MUC3 mucin 3A, cell surface associated protein-coding chr5-641 chr5 88268685 88268917 + 17.4 0.000 promoter-TSS (NM_153354) promoter-TSS (NM_153354) 44 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr15-282 chr15 72306660 72306892 + 17.4 0.000 promoter-TSS (NM_001172685) promoter-TSS (NM_001172685) -461 NM_001172685 60677 Hs.348342 NM_052840 ENSG00000140488 CELF6 BRUNOL6 CUGBP Elav-like family member 6 protein-coding chr2-981 chr2 84821981 84822213 + 17.4 0.000 exon (NM_001277053, exon 7 of 7) exon (NM_001277053, exon 7 of 7) 58987 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr14-352 chr14 64344320 64344552 + 17.4 0.000 Intergenic Intergenic 3175 NR_033777 441687 Hs.685242 NR_033777 TEX21P - testis expressed 21, pseudogene pseudo chr9-368 chr9 112890234 112890466 + 17.4 0.000 exon (NM_033051, exon 1 of 4) exon (NM_033051, exon 1 of 4) 526 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr1-1366 chr1 57181027 57181259 + 17.4 0.000 intron (NM_001353980, intron 5 of 5) L2a|LINE|L2 -215003 NM_001278544 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr10-311 chr10 28906949 28907181 + 17.4 0.000 Intergenic AluSx3|SINE|Alu 60657 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chrX-293 chrX 151610892 151611124 + 17.4 0.000 intron (NM_173493, intron 3 of 15) L1ME3D|LINE|L1 47333 NM_173493 139135 Hs.160594 NM_173493 ENSG00000166049 PASD1 CT63|CT64|OXTES1 PAS domain containing repressor 1 protein-coding chr10-704 chr10 77196577 77196809 + 17.4 0.000 intron (NM_001271519, intron 3 of 28) intron (NM_001271519, intron 3 of 28) 55862 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr2-522 chr2 10303319 10303551 + 17.4 0.000 promoter-TSS (NM_134421) promoter-TSS (NM_134421) -265 NM_134421 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr20-261 chr20 31593513 31593745 + 17.4 0.000 Intergenic Intergenic -11660 NM_181353 3397 Hs.504609 NM_002165 ENSG00000125968 ID1 ID|bHLHb24 inhibitor of DNA binding 1, HLH protein protein-coding chr13-277 chr13 42334271 42334503 + 17.4 0.000 Intergenic Intergenic 62235 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr6-422 chr6 19268127 19268359 + 17.4 0.000 Intergenic Intergenic -87763 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr17-530 chr17 17435383 17435615 + 17.4 0.000 Intergenic Intergenic -41501 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr16-450 chr16 67301396 67301628 + 17.4 0.000 intron (NM_001100915, intron 5 of 15) intron (NM_001100915, intron 5 of 15) 21980 NM_001129731 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr8-288 chr8 22141137 22141369 + 17.4 0.000 intron (NM_001316964, intron 1 of 6) CpG 654 NM_025232 80346 Hs.289063 NM_025232 ENSG00000168476 REEP4 C8orf20|PP432|Yip2c receptor accessory protein 4 protein-coding chr12-605 chr12 32535487 32535719 + 17.4 0.000 intron (NM_001304480, intron 1 of 16) intron (NM_001304480, intron 1 of 16) 1310 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr4-362 chr4 93780283 93780515 + 17.4 0.000 Intergenic L2a|LINE|L2 -48354 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr7-451 chr7 1490939 1491171 + 17.4 0.000 intron (NM_001080453, intron 16 of 47) L1M4|LINE|L1 13334 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr5-677 chr5 132370775 132371007 + 17.4 0.000 promoter-TSS (NR_110997) promoter-TSS (NR_110997) -975 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chr14-328 chr14 104686159 104686391 + 17.4 0.000 Intergenic G-rich|Low_complexity|Low_complexity -3331 NM_032714 64423 Hs.24956 NM_022489 ENSG00000203485 INF2 C14orf151|C14orf173|CMTDIE|FSGS5|pp9484 inverted formin, FH2 and WH2 domain containing protein-coding chr17-743 chr17 17822954 17823186 + 17.4 0.000 intron (NM_004176, intron 1 of 18) intron (NM_004176, intron 1 of 18) 560 NM_001321096 6720 Hs.592123 NM_004176 ENSG00000072310 SREBF1 SREBP1|bHLHd1 sterol regulatory element binding transcription factor 1 protein-coding chr8-358 chr8 133356354 133356586 + 17.4 0.000 Intergenic Intergenic -59166 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr17-843 chr17 74738656 74738888 + 17.4 0.000 intron (NM_001163990, intron 1 of 7) intron (NM_001163990, intron 1 of 7) 1516 NM_001006638 326624 Hs.351413 NM_175738 ENSG00000172794 RAB37 - RAB37, member RAS oncogene family protein-coding chr13-293 chr13 49735353 49735585 + 17.4 0.000 intron (NM_002267, intron 2 of 16) Charlie2a|DNA|hAT-Charlie -43982 NR_103802 84650 Hs.433278 NM_032565 ENSG00000123179 EBPL EBRP EBP like protein-coding chr11-861 chr11 65812055 65812287 + 17.4 0.000 Intergenic Intergenic -21303 NR_108085 101927828 Hs.666246 NR_108085 ENSG00000255120 OVOL1-AS1 - OVOL1 antisense RNA 1 ncRNA chrX-201 chrX 10083186 10083418 + 17.4 0.000 intron (NM_015691, intron 5 of 22) intron (NM_015691, intron 5 of 22) 67547 NM_015691 55841 Hs.527524 NM_015691 ENSG00000047644 WWC3 BM042 WWC family member 3 protein-coding chr6-423 chr6 21753802 21754034 + 17.4 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 87505 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr1-663 chr1 145465343 145465575 + 17.4 0.000 Intergenic Intergenic -59681 NM_001278267 100288142 Hs.445080 NM_001278267 ENSG00000162825 NBPF20 - NBPF member 20 protein-coding chr11-924 chr11 83434618 83434850 + 17.4 0.000 Intergenic HERVH-int|LTR|ERV1 -148327 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr4-504 chr4 5655468 5655700 + 17.4 0.000 intron (NM_147127, intron 9 of 21) intron (NM_147127, intron 9 of 21) 52975 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr12-664 chr12 69252088 69252320 + 17.4 0.000 intron (NM_007007, intron 2 of 9) AluJr4|SINE|Alu 12635 NM_007007 11052 Hs.369606 NM_007007 ENSG00000111605 CPSF6 CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7 cleavage and polyadenylation specific factor 6 protein-coding chr2-957 chr2 55743760 55743992 + 17.4 0.000 Intergenic THE1D|LTR|ERVL-MaLR -50032 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding chr18-239 chr18 69191836 69192068 + 17.4 0.000 Intergenic Intergenic -208936 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chrX-231 chrX 48676001 48676233 + 17.4 0.000 Intergenic Intergenic -7680 NM_000377 7454 Hs.2157 NM_000377 ENSG00000015285 WAS IMD2|SCNX|THC|THC1|WASP|WASPA WASP actin nucleation promoting factor protein-coding chr9-448 chr9 105695146 105695378 + 17.4 0.000 intron (NM_018112, intron 1 of 5) intron (NM_018112, intron 1 of 5) 721 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr15-447 chr15 78770738 78770970 + 17.4 0.000 intron (NM_014272, intron 16 of 23) intron (NM_014272, intron 16 of 23) 18817 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr2-795 chr2 98149249 98149481 + 17.4 0.000 promoter-TSS (NM_001345864) promoter-TSS (NM_001345864) -168 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr11-768 chr11 3855269 3855501 + 17.4 0.000 promoter-TSS (NM_003156) promoter-TSS (NM_003156) -279 NM_001277962 6786 Hs.501735 NM_003156 ENSG00000167323 STIM1 D11S4896E|GOK|IMD10|STRMK|TAM|TAM1 stromal interaction molecule 1 protein-coding chr6-637 chr6 158895470 158895702 + 17.4 0.000 intron (NR_160979, intron 2 of 2) intron (NR_160979, intron 2 of 2) 7109 NR_160979 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chr13-170 chr13 34308836 34309068 + 17.4 0.000 Intergenic Intergenic -39091 NR_146542 105370158 NR_146542 LINC02343 - long intergenic non-protein coding RNA 2343 ncRNA chr11-954 chr11 114929503 114929735 + 17.4 0.000 Intergenic Intergenic 251092 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr17-602 chr17 82303038 82303270 + 17.4 0.000 Intergenic Intergenic -10340 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr9-701 chr9 129143098 129143330 + 17.4 0.000 intron (NM_178001, intron 10 of 10) intron (NM_178001, intron 10 of 10) 31526 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr4-628 chr4 135039832 135040064 + 17.4 0.000 Intergenic MLT2A1|LTR|ERVL 83611 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA chr1-654 chr1 85577050 85577282 + 17.4 0.000 intron (NM_001134445, intron 1 of 6) CpG 1034 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr19-749 chr19 1986944 1987176 + 17.4 0.000 intron (NM_017797, intron 7 of 8) intron (NM_017797, intron 7 of 8) 28654 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr4-348 chr4 62625429 62625661 + 17.2 0.000 Intergenic Intergenic -463780 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA chr12-468 chr12 118190013 118190245 + 17.2 0.000 5' UTR (NM_001346494, exon 1 of 8) 5' UTR (NM_001346494, exon 1 of 8) 406 NM_001346495 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr17-359 chr17 32192388 32192620 + 17.2 0.000 intron (NM_001033566, intron 9 of 19) intron (NM_001033566, intron 9 of 19) -40933 NR_002222 503640 Hs.631752 NR_002222 ARGFXP2 - arginine-fifty homeobox pseudogene 2 pseudo chrX-297 chrX 153985550 153985782 + 17.2 0.000 Intergenic Intergenic -4490 NR_036175 100422877 NR_036175 ENSG00000283694 MIR3202-2 mir-3202-2 microRNA 3202-2 ncRNA chr5-589 chr5 34587621 34587853 + 17.2 0.000 Intergenic Intergenic -68591 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr16-570 chr16 3954558 3954790 + 17.2 0.000 Intergenic Intergenic -4230 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr5-261 chr5 176413169 176413401 + 17.2 0.000 intron (NR_045724, intron 1 of 5) intron (NR_045724, intron 1 of 5) -2462 NM_001364126 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr15-222 chr15 84981929 84982161 + 17.2 0.000 promoter-TSS (NM_173454) promoter-TSS (NM_173454) 71 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr3-348 chr3 15328341 15328573 + 17.2 0.000 intron (NM_001018009, intron 2 of 8) AluJr|SINE|Alu 4129 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr21-81 chr21 41066232 41066464 + 17.2 0.000 Intergenic Intergenic 81716 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr16-511 chr16 49836899 49837131 + 17.2 0.000 intron (NM_001271620, intron 1 of 7) intron (NM_001271620, intron 1 of 7) -14277 NM_015069 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr17-529 chr17 16889096 16889328 + 17.2 0.000 Intergenic Intergenic -43340 NR_146392 147228 Hs.565076 NM_001349721 KRT17P1 - keratin 17 pseudogene 1 pseudo chr14-367 chr14 100127471 100127703 + 17.2 0.000 intron (NM_001330221, intron 5 of 13) intron (NM_001330221, intron 5 of 13) 17932 NR_029888 442909 NR_029888 ENSG00000199082 MIR342 MIRN342|hsa-mir-342 microRNA 342 ncRNA chr2-173 chr2 212451890 212452122 + 17.2 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) -25646 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr2-529 chr2 31239881 31240113 + 17.2 0.000 intron (NM_014600, intron 1 of 5) intron (NM_014600, intron 1 of 5) 5845 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr7-583 chr7 50171598 50171830 + 17.2 0.000 Intergenic MLT2F|LTR|ERVL 75628 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding chr2-324 chr2 69829568 69829800 + 17.2 0.000 promoter-TSS (NM_178439) promoter-TSS (NM_178439) 24 NM_178439 64395 Hs.293971 NM_178439 ENSG00000087338 GMCL1 BTBD13|GCL|GCL1|SPATA29 germ cell-less 1, spermatogenesis associated protein-coding chr17-790 chr17 44941792 44942024 + 17.2 0.000 intron (NM_001265577, intron 1 of 15) intron (NM_001265577, intron 1 of 15) 5865 NM_001265577 146909 Hs.135094 NM_001080443 ENSG00000186185 KIF18B - kinesin family member 18B protein-coding chr1-643 chr1 55039676 55039908 + 17.2 0.000 promoter-TSS (NR_110451) promoter-TSS (NR_110451) 316 NM_174936 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr1-1428 chr1 116818525 116818757 + 17.2 0.000 Intergenic Intergenic 64211 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr8-326 chr8 93740675 93740907 + 17.2 0.000 TTS (NR_027259) TTS (NR_027259) 218 NM_203390 389677 Hs.606916 NM_203390 ENSG00000183808 RBM12B MGC:33837 RNA binding motif protein 12B protein-coding chr2-776 chr2 64263379 64263611 + 17.2 0.000 Intergenic Intergenic 35094 NR_120420 100507006 Hs.442789 NR_120420 LOC100507006 - uncharacterized LOC100507006 ncRNA chr1-1089 chr1 19353833 19354065 + 17.2 0.000 intron (NM_001206540, intron 6 of 9) intron (NM_001206540, intron 6 of 9) 41623 NM_001287531 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr8-286 chr8 19080968 19081200 + 17.2 0.000 Intergenic Intergenic -67381 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr19-576 chr19 7394859 7395091 + 17.2 0.000 promoter-TSS (NM_001367824) promoter-TSS (NM_001367824) -170 NM_001367824 23370 Hs.465761 NM_015318 ENSG00000104880 ARHGEF18 P114-RhoGEF|RP78|SA-RhoGEF|p114RhoGEF Rho/Rac guanine nucleotide exchange factor 18 protein-coding chr6-228 chr6 96521690 96521922 + 17.2 0.000 promoter-TSS (NM_015323) promoter-TSS (NM_015323) 0 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr9-612 chr9 77085511 77085743 + 17.2 0.000 Intergenic Intergenic 65972 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chr9-281 chr9 34577052 34577284 + 17.2 0.000 intron (NM_001842, intron 1 of 8) intron (NM_001842, intron 1 of 8) 9156 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr19-642 chr19 47019755 47019987 + 17.2 0.000 promoter-TSS (NM_002517) promoter-TSS (NM_002517) 34 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr3-374 chr3 81761414 81761646 + 17.2 0.000 5' UTR (NM_000158, exon 1 of 16) 5' UTR (NM_000158, exon 1 of 16) 115 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr1-1319 chr1 33188882 33189114 + 17.2 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -6955 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr17-818 chr17 59571141 59571373 + 17.2 0.000 intron (NM_024612, intron 3 of 17) AluSp|SINE|Alu 5647 NM_024612 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding chr5-62 chr5 177480444 177480676 + 17.2 0.000 Intergenic AluJb|SINE|Alu -6867 NM_004395 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr21-149 chr21 38361548 38361780 + 17.2 0.000 Intergenic Intergenic -15588 NR_110545 102724678 Hs.635675 NR_110545 LINC01423 - long intergenic non-protein coding RNA 1423 ncRNA chr16-636 chr16 66250869 66251101 + 17.2 0.000 Intergenic Intergenic -115706 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr10-819 chr10 125734334 125734566 + 17.2 0.000 intron (NR_110859, intron 12 of 25) MER33|DNA|hAT-Charlie 14741 NR_110859 26098 Hs.468688 NM_015608 ENSG00000107938 EDRF1 C10orf137 erythroid differentiation regulatory factor 1 protein-coding chr1-627 chr1 35718691 35718923 + 17.2 0.000 promoter-TSS (NM_152374) promoter-TSS (NM_152374) 77 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr10-665 chr10 60205711 60205943 + 17.2 0.000 exon (NM_020987, exon 11 of 44) exon (NM_020987, exon 11 of 44) -64811 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr5-682 chr5 133657115 133657347 + 17.2 0.000 Intergenic Intergenic -44690 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr18-240 chr18 69628542 69628774 + 17.2 0.000 intron (NM_152721, intron 3 of 7) intron (NM_152721, intron 3 of 7) 158727 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA chr20-187 chr20 3239376 3239608 + 17.2 0.000 promoter-TSS (NM_001174089) promoter-TSS (NM_001174089) -302 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr7-469 chr7 33373747 33373979 + 17.2 0.000 intron (NM_198428, intron 17 of 22) intron (NM_198428, intron 17 of 22) 244299 NM_001348041 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr5-737 chr5 171755380 171755612 + 17.2 0.000 Intergenic Intergenic -30376 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr16-264 chr16 2297259 2297491 + 17.2 0.000 exon (NM_001089, exon 17 of 33) exon (NM_001089, exon 17 of 33) 22755 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr1-634 chr1 44819418 44819650 + 17.2 0.000 TTS (NM_001166292) TTS (NM_001166292) 11052 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr2-281 chr2 200306492 200306724 + 17.2 0.000 promoter-TSS (NM_001100423) promoter-TSS (NM_001100423) -85 NM_001100423 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr10-786 chr10 110536366 110536598 + 17.2 0.000 Intergenic Intergenic -31209 NM_005445 9126 Hs.24485 NM_005445 ENSG00000108055 SMC3 BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1 structural maintenance of chromosomes 3 protein-coding chr2-719 chr2 217371790 217372022 + 17.2 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 89173 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr3-842 chr3 132543075 132543307 + 17.2 0.000 Intergenic Intergenic -54079 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chr5-329 chr5 53782372 53782604 + 17.2 0.000 intron (NR_147167, intron 4 of 5) intron (NR_147167, intron 4 of 5) 37194 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr7-335 chr7 134790553 134790785 + 17.2 0.000 intron (NM_033157, intron 1 of 14) intron (NM_033157, intron 1 of 14) 11035 NM_004342 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr5-609 chr5 57950825 57951057 + 17.2 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -51779 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr2-892 chr2 21297095 21297327 + 17.2 0.000 Intergenic Intergenic 173225 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding chr4-317 chr4 2063177 2063409 + 17.2 0.000 intron (NM_178557, intron 2 of 2) intron (NM_178557, intron 2 of 2) 3966 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr2-1111 chr2 211761188 211761420 + 17.2 0.000 intron (NM_001042599, intron 4 of 26) intron (NM_001042599, intron 4 of 26) 665056 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr13-159 chr13 19150473 19150705 + 17.2 0.000 Intergenic Intergenic 31235 NM_006001 7278 Hs.349695 NM_006001 ENSG00000198033 TUBA3C TUBA2|bA408E5.3 tubulin alpha 3c protein-coding chr7-484 chr7 47948491 47948723 + 17.2 0.000 promoter-TSS (NM_138295) promoter-TSS (NM_138295) -116 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr2-980 chr2 84607205 84607437 + 17.2 0.000 intron (NM_001370, intron 21 of 76) Tigger1|DNA|TcMar-Tigger 90866 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding chr17-523 chr17 9309346 9309578 + 17.2 0.000 intron (NM_004853, intron 7 of 7) intron (NM_004853, intron 7 of 7) -130344 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chrX-68 chrX 154527190 154527422 + 17.2 0.000 Intergenic Intergenic -11064 NM_001171134 60343 Hs.289108 NM_021806 ENSG00000071889 FAM3A 2.19|DLD|DXS560S|XAP-7 family with sequence similarity 3 member A protein-coding chr2-634 chr2 80551020 80551252 + 17.2 0.000 intron (NM_001282599, intron 5 of 11) Tigger1|DNA|TcMar-Tigger 237757 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding chr3-903 chr3 182265703 182265935 + 17.2 0.000 Intergenic Intergenic 220543 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr13-146 chr13 52194465 52194697 + 17.2 0.000 promoter-TSS (NR_002816) promoter-TSS (NR_002816) -114 NR_051963 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr5-700 chr5 139767780 139768012 + 17.2 0.000 Intergenic MIRb|SINE|MIR -21673 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr18-241 chr18 69817620 69817852 + 17.2 0.000 intron (NM_152721, intron 7 of 7) MLT1B|LTR|ERVL-MaLR 130137 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr1-1580 chr1 222226804 222227036 + 17.2 0.000 Intergenic MSTB|LTR|ERVL-MaLR -248400 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr8-48 chr8 125430124 125430356 + 17.2 0.000 promoter-TSS (NM_025195) promoter-TSS (NM_025195) -118 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr5-475 chr5 173206796 173207028 + 17.2 0.000 Intergenic L2a|LINE|L2 28294 NM_004387 1482 Hs.54473 NM_004387 ENSG00000183072 NKX2-5 CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3 NK2 homeobox 5 protein-coding chr3-723 chr3 23865981 23866213 + 17.2 0.000 intron (NM_003341, intron 3 of 5) intron (NM_003341, intron 3 of 5) -50448 NM_001253384 6138 Hs.381219 NM_002948 ENSG00000174748 RPL15 DBA12|EC45|L15|RPL10|RPLY10|RPYL10 ribosomal protein L15 protein-coding chr18-41 chr18 110461 110693 + 17.2 0.000 intron (NR_033770, intron 1 of 4) BSR/Beta|Satellite|Satellite -1036 NR_160778 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chr19-658 chr19 58397071 58397303 + 17.2 0.000 TTS (NM_001195135) TTS (NM_001195135) 1097 NM_001195135 646862 Hs.728121 NM_001195135 ENSG00000269855 RNF225 - ring finger protein 225 protein-coding chr1-1581 chr1 223173961 223174193 + 17.2 0.000 Intergenic Intergenic -30829 NM_003268 7100 Hs.604542 NM_003268 ENSG00000187554 TLR5 MELIOS|SLE1|SLEB1|TIL3 toll like receptor 5 protein-coding chr14-405 chr14 59332524 59332756 + 17.2 0.000 intron (NM_001270520, intron 15 of 24) intron (NM_001270520, intron 15 of 24) 69199 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr6-132 chr6 34791588 34791820 + 17.2 0.000 promoter-TSS (NM_017754) promoter-TSS (NM_017754) -379 NM_017754 54887 Hs.700656 NM_017754 ENSG00000065060 UHRF1BP1 C6orf107|ICBP90|dJ349A12.1 UHRF1 binding protein 1 protein-coding chr15-311 chr15 41116357 41116589 + 17.2 0.000 promoter-TSS (NR_104038) promoter-TSS (NR_104038) -193 NM_017553 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr9-637 chr9 97909187 97909419 + 17.2 0.000 intron (NM_001330725, intron 5 of 5) Tigger15a|DNA|TcMar-Tigger 13267 NM_016481 51531 Hs.9196 NM_016481 ENSG00000136932 TRMO C9orf156|HSPC219|NAP1 tRNA methyltransferase O protein-coding chr1-1374 chr1 67793640 67793872 + 17.2 0.000 intron (NM_018841, intron 1 of 3) intron (NM_018841, intron 1 of 3) -38532 NR_040077 100289178 Hs.677603 NR_040077 ENSG00000232284 GNG12-AS1 - GNG12, DIRAS3 and WLS antisense RNA 1 ncRNA chr2-1057 chr2 172674825 172675057 + 17.2 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -60904 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr11-285 chr11 65850953 65851185 + 17.2 0.000 exon (NM_152760, exon 7 of 13) exon (NM_152760, exon 7 of 13) 7111 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding chr1-1289 chr1 24911979 24912211 + 17.2 0.000 intron (NM_001320672, intron 5 of 6) intron (NM_001320672, intron 5 of 6) 7321 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr11-591 chr11 63813738 63813970 + 17.2 0.000 intron (NM_138471, intron 1 of 5) CpG 398 NM_138471 144097 Hs.502793 NM_138471 ENSG00000168005 SPINDOC C11orf84|SPIN-DOC spindlin interactor and repressor of chromatin binding protein-coding chr12-228 chr12 104736423 104736655 + 17.2 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 144906 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr15-138 chr15 88873844 88874076 + 17.2 0.000 exon (NM_013227, exon 17 of 18) exon (NM_013227, exon 17 of 18) 21584 NM_001307952 145864 Hs.447530 NM_178232 ENSG00000140511 HAPLN3 EXLD1|HsT19883 hyaluronan and proteoglycan link protein 3 protein-coding chr12-645 chr12 55657389 55657621 + 17.2 0.000 Intergenic Intergenic 20613 NM_206899 121130 Hs.554551 NM_206899 ENSG00000175398 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor family 10 subfamily P member 1 protein-coding chr22-384 chr22 32333747 32333979 + 17.0 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -21022 NM_006604 10738 Hs.558455 NM_006604 ENSG00000128276 RFPL3 RNF120 ret finger protein like 3 protein-coding chr9-624 chr9 91954891 91955123 + 17.0 0.000 Intergenic L2c|LINE|L2 -4779 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr2-416 chr2 237482488 237482720 + 17.0 0.000 Intergenic Intergenic -3806 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr5-728 chr5 159912512 159912744 + 17.0 0.000 Intergenic MIRb|SINE|MIR -3854 NM_000679 147 Hs.368632 NM_000679 ENSG00000170214 ADRA1B ADRA1|ALPHA1BAR adrenoceptor alpha 1B protein-coding chr14-464 chr14 100550920 100551152 + 17.0 0.000 intron (NM_001159531, intron 1 of 5) intron (NM_001159531, intron 1 of 5) 17034 NM_001159531 57596 Hs.211751 NM_020836 ENSG00000183092 BEGAIN - brain enriched guanylate kinase associated protein-coding chr6-288 chr6 99072239 99072471 + 17.0 0.000 Intergenic LTR16B|LTR|ERVL -52254 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr8-495 chr8 49412504 49412736 + 17.0 0.000 Intergenic ERVL-E-int|LTR|ERVL 99560 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA chr2-765 chr2 37190008 37190240 + 17.0 0.000 intron (NM_001032377, intron 2 of 8) intron (NM_001032377, intron 2 of 8) -1454 NM_001367551 391365 Hs.631892 NM_001032377 ENSG00000138068 SULT6B1 ST6B1 sulfotransferase family 6B member 1 protein-coding chr13-124 chr13 98476659 98476891 + 17.0 0.000 intron (NM_001286649, intron 2 of 9) intron (NM_001286649, intron 2 of 9) 45350 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr21-123 chr21 9762766 9762998 + 17.0 0.000 Intergenic L1M5|LINE|L1 58179 NR_038377 441058 Hs.130535 NR_038377 LINC01667 - long intergenic non-protein coding RNA 1667 ncRNA chr8-262 chr8 61736728 61736960 + 17.0 0.000 Intergenic MER49|LTR|ERV1 22056 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA chr1-1267 chr1 18587451 18587683 + 17.0 0.000 Intergenic Intergenic -43279 NM_001135254 5081 Hs.113253 NM_002584 ENSG00000009709 PAX7 HUP1|PAX7B|RMS2 paired box 7 protein-coding chr3-81 chr3 134464083 134464315 + 17.0 0.000 Intergenic Intergenic -21525 NM_001042384 80254 Hs.443301 NM_025180 ENSG00000182923 CEP63 SCKL6 centrosomal protein 63 protein-coding chr20-383 chr20 56689919 56690151 + 17.0 0.000 Intergenic LTR16|LTR|ERVL 60729 NM_003222 7022 Hs.473152 NM_003222 ENSG00000087510 TFAP2C AP2-GAMMA|ERF1|TFAP2G|hAP-2g transcription factor AP-2 gamma protein-coding chr7-683 chr7 27175415 27175647 + 17.0 0.000 intron (NR_037939, intron 1 of 1) intron (NR_037939, intron 1 of 1) -1211 NM_018951 3206 Hs.110637 NM_018951 ENSG00000253293 HOXA10 HOX1|HOX1.8|HOX1H|PL homeobox A10 protein-coding chr20-244 chr20 62723414 62723646 + 17.0 0.000 intron (NM_002531, intron 1 of 3) intron (NM_002531, intron 1 of 3) 14694 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr3-764 chr3 52083325 52083557 + 17.0 0.000 intron (NM_001161580, intron 9 of 9) intron (NM_001161580, intron 9 of 9) -18329 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr9-707 chr9 130510627 130510859 + 17.0 0.000 Intergenic L1MEc|LINE|L1 65782 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chrX-204 chrX 22389596 22389828 + 17.0 0.000 non-coding (NR_073010, exon 5 of 12) non-coding (NR_073010, exon 5 of 12) 116799 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr2-988 chr2 95568201 95568433 + 17.0 0.000 Intergenic Intergenic -23684 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr8-191 chr8 127854361 127854593 + 17.0 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 58515 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr7-536 chr7 129062650 129062882 + 17.0 0.000 Intergenic MER21C|LTR|ERVL 7543 NR_002187 286016 Hs.369665 NR_002187 ENSG00000230359 TPI1P2 - triosephosphate isomerase 1 pseudogene 2 pseudo chr2-1056 chr2 172429500 172429732 + 17.0 0.000 intron (NM_001365530, intron 1 of 25) intron (NM_001365530, intron 1 of 25) 2030 NM_001365529 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr9-273 chr9 7243819 7244051 + 17.0 0.000 Intergenic Intergenic 486585 NR_148677 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr20-370 chr20 45972496 45972728 + 17.0 0.000 promoter-TSS (NM_022095) promoter-TSS (NM_022095) -409 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr20-361 chr20 42426087 42426319 + 17.0 0.000 intron (NM_133170, intron 9 of 31) LTR1F1|LTR|ERV1 -259280 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA chr15-409 chr15 63174882 63175114 + 17.0 0.000 Intergenic MER115|DNA|hAT-Tip100 -14608 NM_016530 51762 Hs.389733 NM_016530 ENSG00000166128 RAB8B - RAB8B, member RAS oncogene family protein-coding chr20-352 chr20 38001547 38001779 + 17.0 0.000 intron (NM_001303457, intron 4 of 7) intron (NM_001303457, intron 4 of 7) 31793 NM_014657 9675 Hs.655481 NM_014657 ENSG00000101407 TTI1 KIAA0406|smg-10 TELO2 interacting protein 1 protein-coding chr13-133 chr13 113035170 113035402 + 17.0 0.000 intron (NM_001320815, intron 3 of 30) intron (NM_001320815, intron 3 of 30) -9360 NM_001366646 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr9-397 chr9 673673 673905 + 17.0 0.000 intron (NM_001256877, intron 2 of 12) intron (NM_001256877, intron 2 of 12) -12978 NM_001354336 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr14-348 chr14 53501759 53501991 + 17.0 0.000 Intergenic Intergenic 348521 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr9-675 chr9 124031025 124031257 + 17.0 0.000 intron (NM_004789, intron 4 of 4) intron (NM_004789, intron 4 of 4) 19373 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr5-320 chr5 373182 373414 + 17.0 0.000 intron (NM_020731, intron 3 of 11) intron (NM_020731, intron 3 of 11) 69122 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr15-294 chr15 83955758 83955990 + 17.0 0.000 intron (NM_207517, intron 19 of 29) L1MA2|LINE|L1 -124313 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr9-742 chr9 136018575 136018807 + 17.0 0.000 intron (NM_144653, intron 2 of 5) intron (NM_144653, intron 2 of 5) -57318 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr3-880 chr3 157081711 157081943 + 17.0 0.000 promoter-TSS (NR_135546) promoter-TSS (NR_135546) -14 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA chr10-638 chr10 32956441 32956673 + 17.0 0.000 intron (NM_002211, intron 1 of 15) AluJb|SINE|Alu 1337 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr7-815 chr7 119740173 119740405 + 17.0 0.000 intron (NR_131962, intron 2 of 2) MER58C|DNA|hAT-Charlie 167086 NR_131960 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr17-775 chr17 40180695 40180927 + 17.0 0.000 intron (NM_016339, intron 1 of 14) intron (NM_016339, intron 1 of 14) 3341 NM_016339 51195 Hs.632254 NM_016339 ENSG00000108352 RAPGEFL1 Link-GEFII Rap guanine nucleotide exchange factor like 1 protein-coding chr11-602 chr11 65718524 65718756 + 17.0 0.000 exon (NM_182709, exon 11 of 13) exon (NM_182709, exon 11 of 13) 2298 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr8-76 chr8 144533905 144534137 + 17.0 0.000 intron (NM_025251, intron 7 of 10) intron (NM_025251, intron 7 of 10) -4910 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr1-1210 chr1 1348415 1348647 + 17.0 0.000 intron (NM_004421, intron 1 of 14) intron (NM_004421, intron 1 of 14) 887 NM_001330311 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr2-754 chr2 18345711 18345943 + 17.0 0.000 Intergenic LTR16A|LTR|ERVL 214826 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding chr1-843 chr1 12810758 12810990 + 17.0 0.000 Intergenic Intergenic 12349 NR_146629 105376745 Hs.443377 NR_146629 ENSG00000228338 LINC01784 - long intergenic non-protein coding RNA 1784 ncRNA chr8-306 chr8 52940554 52940786 + 17.0 0.000 exon (NM_005285, exon 1 of 1) exon (NM_005285, exon 1 of 1) 762 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr7-430 chr7 84364724 84364956 + 17.0 0.000 Intergenic Intergenic -167636 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA chr20-197 chr20 23999085 23999317 + 17.0 0.000 Intergenic L1M6|LINE|L1 -10422 NM_178311 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr9-518 chr9 72525206 72525438 + 17.0 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 3521 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr4-635 chr4 141130214 141130446 + 17.0 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 3139 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr14-336 chr14 22851037 22851269 + 17.0 0.000 Intergenic Intergenic 14568 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr5-399 chr5 66958522 66958754 + 17.0 0.000 promoter-TSS (NM_001290226) promoter-TSS (NM_001290226) -435 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr11-925 chr11 85627278 85627510 + 17.0 0.000 promoter-TSS (NM_001142699) promoter-TSS (NM_001142699) -124 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-505 chr12 45730613 45730845 + 17.0 0.000 intron (NM_152641, intron 2 of 20) intron (NM_152641, intron 2 of 20) 1020 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding chr8-460 chr8 28074094 28074326 + 17.0 0.000 intron (NM_001010906, intron 2 of 18) intron (NM_001010906, intron 2 of 18) 9726 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr1-625 chr1 35433548 35433780 + 17.0 0.000 3' UTR (NM_024874, exon 21 of 21) 3' UTR (NM_024874, exon 21 of 21) -67587 NR_046659 100861513 Hs.585397 NR_046659 ENSG00000227409 ZMYM4-AS1 - ZMYM4 antisense RNA 1 ncRNA chr11-216 chr11 35525605 35525837 + 17.0 0.000 promoter-TSS (NM_001001991) promoter-TSS (NM_001001991) -105 NM_001001991 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr18-243 chr18 73759704 73759936 + 17.0 0.000 Intergenic Intergenic 388014 NM_001142958 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr9-687 chr9 125574384 125574616 + 17.0 0.000 intron (NM_001006619, intron 5 of 10) intron (NM_001006619, intron 5 of 10) 132708 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr20-391 chr20 61577553 61577785 + 17.0 0.000 intron (NM_001252338, intron 1 of 14) intron (NM_001252338, intron 1 of 14) -22092 NM_001252339 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr1-1619 chr1 246142468 246142700 + 17.0 0.000 intron (NM_022743, intron 5 of 11) MER44C|DNA|TcMar-Tigger 274828 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-756 chr12 128601619 128601851 + 17.0 0.000 intron (NM_001136103, intron 3 of 8) intron (NM_001136103, intron 3 of 8) 222223 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr17-664 chr17 73305239 73305471 + 17.0 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 6646 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr12-668 chr12 76259476 76259708 + 17.0 0.000 promoter-TSS (NR_146531) promoter-TSS (NR_146531) -291 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr13-312 chr13 71585097 71585329 + 17.0 0.000 intron (NM_001366712, intron 3 of 11) L2a|LINE|L2 281979 NM_004392 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr22-150 chr22 43151827 43152059 + 17.0 0.000 promoter-TSS (NM_001256531) promoter-TSS (NM_001256531) 8 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr5-422 chr5 96687948 96688180 + 17.0 0.000 intron (NM_001330629, intron 2 of 30) intron (NM_001330629, intron 2 of 30) -14596 NM_001330632 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr1-1095 chr1 28826206 28826438 + 17.0 0.000 intron (NM_000911, intron 1 of 2) AluJb|SINE|Alu 14152 NM_000911 4985 Hs.372 NM_000911 ENSG00000116329 OPRD1 DOP|DOR|DOR1|OPRD opioid receptor delta 1 protein-coding chr2-1065 chr2 174771809 174772041 + 17.0 0.000 Intergenic L2|LINE|L2 -7453 NM_000079 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr3-379 chr3 113241972 113242204 + 17.0 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 29972 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr4-654 chr4 153113235 153113467 + 17.0 0.000 Intergenic L2|LINE|L2 -38983 NM_001351056 23321 Hs.435711 NM_015271 ENSG00000109654 TRIM2 CMT2R|RNF86 tripartite motif containing 2 protein-coding chr4-161 chr4 102501677 102501909 + 17.0 0.000 promoter-TSS (NM_001319226) promoter-TSS (NM_001319226) -141 NM_001319226 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr2-1124 chr2 218536684 218536916 + 17.0 0.000 intron (NM_020935, intron 8 of 25) intron (NM_020935, intron 8 of 25) 31551 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr13-282 chr13 45193616 45193848 + 17.0 0.000 3' UTR (NM_198404, exon 2 of 2) 3' UTR (NM_198404, exon 2 of 2) 7313 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr11-865 chr11 66015093 66015325 + 17.0 0.000 Intergenic Intergenic 3201 NM_001323 1474 Hs.139389 NM_001323 ENSG00000175315 CST6 - cystatin E/M protein-coding chrX-247 chrX 71332992 71333224 + 17.0 0.000 Intergenic AluSx3|SINE|Alu 31358 NM_001303277 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr17-683 chr17 78251386 78251618 + 17.0 0.000 Intergenic Intergenic 20192 NM_001204211 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr15-170 chr15 48547882 48548114 + 17.0 0.000 intron (NM_000138, intron 6 of 65) intron (NM_000138, intron 6 of 65) 97790 NM_000138 2200 Hs.591133 NM_000138 ENSG00000166147 FBN1 ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2 fibrillin 1 protein-coding chr8-568 chr8 125129929 125130161 + 17.0 0.000 intron (NM_001349486, intron 3 of 7) L1MC3|LINE|L1 38185 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding chr10-759 chr10 100878571 100878803 + 17.0 0.000 Intergenic Intergenic -34276 NM_018121 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding chr2-689 chr2 172558074 172558306 + 17.0 0.000 intron (NM_002610, intron 1 of 10) HY3|scRNA|scRNA 2100 NM_002610 5163 Hs.470633 NM_002610 ENSG00000152256 PDK1 - pyruvate dehydrogenase kinase 1 protein-coding chr6-546 chr6 71602238 71602470 + 17.0 0.000 Intergenic Intergenic 181327 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr2-1107 chr2 206452025 206452257 + 17.0 0.000 intron (NM_003812, intron 2 of 25) MER102a|DNA|hAT-Charlie 8609 NM_003812 8745 Hs.370287 NM_003812 ENSG00000114948 ADAM23 MDC-3|MDC3 ADAM metallopeptidase domain 23 protein-coding chr14-162 chr14 53717365 53717597 + 17.0 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat 231003 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr18-176 chr18 812724 812956 + 17.0 0.000 promoter-TSS (NM_005433) promoter-TSS (NM_005433) -598 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr11-837 chr11 62440000 62440232 + 17.0 0.000 intron (NM_024060, intron 5 of 5) intron (NM_024060, intron 5 of 5) 21083 NM_003357 7356 Hs.523732 NM_003357 ENSG00000149021 SCGB1A1 CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1 secretoglobin family 1A member 1 protein-coding chr2-699 chr2 196482321 196482553 + 16.8 0.000 intron (NM_001348768, intron 1 of 28) MER45C|DNA|hAT-Tip100 110546 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr17-215 chr17 2375436 2375668 + 16.8 0.000 exon (NM_014853, exon 18 of 24) exon (NM_014853, exon 18 of 24) 25508 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr8-422 chr8 136172179 136172411 + 16.8 0.000 Intergenic Intergenic -358503 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr5-331 chr5 65925826 65926058 + 16.8 0.000 promoter-TSS (NM_001253698) promoter-TSS (NM_001253698) -612 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr19-578 chr19 7632697 7632929 + 16.8 0.000 TTS (NM_001171155) TTS (NM_001171155) 179 NM_001271830 126006 Hs.591400 NM_174895 ENSG00000174788 PCP2 GPSM4 Purkinje cell protein 2 protein-coding chr9-363 chr9 104256124 104256356 + 16.8 0.000 Intergenic LTR10E|LTR|ERV1 -13989 NR_135141 105376194 Hs.553289 NR_135141 LOC105376194 - uncharacterized LOC105376194 ncRNA chr1-969 chr1 150617225 150617457 + 16.8 0.000 Intergenic AluSq|SINE|Alu 11792 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr17-518 chr17 7913169 7913401 + 16.8 0.000 TTS (NM_001005271) TTS (NM_001005271) 2910 NM_001358699 284023 Hs.744470 NM_001358699 ENSG00000179859 RNF227 LINC02581 ring finger protein 227 protein-coding chr20-296 chr20 63840554 63840786 + 16.8 0.000 Intergenic Intergenic -9406 NM_001369741 140685 Hs.585028 NM_025224 ENSG00000130584 ZBTB46 BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8 zinc finger and BTB domain containing 46 protein-coding chr7-867 chr7 151249255 151249487 + 16.8 0.000 promoter-TSS (NM_001003801) promoter-TSS (NM_001003801) -677 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr12-533 chr12 83016247 83016479 + 16.8 0.000 intron (NM_152588, intron 8 of 11) L2a|LINE|L2 329208 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr3-867 chr3 152121408 152121640 + 16.8 0.000 Intergenic Intergenic 83905 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr11-833 chr11 61681983 61682215 + 16.8 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 1708 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr9-412 chr9 34073135 34073367 + 16.8 0.000 Intergenic Intergenic -24052 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr20-251 chr20 3846241 3846473 + 16.8 0.000 promoter-TSS (NM_001206491) promoter-TSS (NM_001206491) -442 NM_001206491 57506 Hs.570362 NM_020746 ENSG00000088888 MAVS CARDIF|IPS-1|IPS1|VISA mitochondrial antiviral signaling protein protein-coding chr3-418 chr3 197008882 197009114 + 16.8 0.000 intron (NM_005929, intron 11 of 15) intron (NM_005929, intron 11 of 15) 6092 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr3-645 chr3 73270715 73270947 + 16.8 0.000 Intergenic Intergenic 163164 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr3-840 chr3 128836937 128837169 + 16.8 0.000 Intergenic HERVH-int|LTR|ERV1 -9755 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr1-1507 chr1 179079322 179079554 + 16.8 0.000 Intergenic Intergenic -2632 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr17-860 chr17 78824211 78824443 + 16.8 0.000 intron (NM_001321291, intron 6 of 20) intron (NM_001321291, intron 6 of 20) 16200 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr1-1378 chr1 71642517 71642749 + 16.8 0.000 intron (NM_173808, intron 4 of 6) intron (NM_173808, intron 4 of 6) 194379 NR_046218 100852409 Hs.681780 NR_046218 ENSG00000228853 NEGR1-IT1 - NEGR1 intronic transcript 1 ncRNA chr6-417 chr6 9516233 9516465 + 16.8 0.000 Intergenic Intergenic 864140 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr16-663 chr16 74885503 74885735 + 16.8 0.000 intron (NM_030581, intron 25 of 25) intron (NM_030581, intron 25 of 25) 99504 NM_030581 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding chr12-638 chr12 52644300 52644532 + 16.8 0.000 TTS (NM_000423) TTS (NM_000423) 7795 NM_000423 3849 Hs.707 NM_000423 ENSG00000172867 KRT2 CK-2e|K2e|KRT2A|KRT2E|KRTE keratin 2 protein-coding chr9-638 chr9 98483537 98483769 + 16.8 0.000 intron (NM_005458, intron 4 of 18) L2b|LINE|L2 225282 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr14-334 chr14 105421845 105422077 + 16.8 0.000 intron (NM_001203258, intron 1 of 20) intron (NM_001203258, intron 1 of 20) 2134 NM_004689 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr11-955 chr11 115504827 115505059 + 16.8 0.000 promoter-TSS (NM_001301043) promoter-TSS (NM_001301043) -528 NM_001098517 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding chr22-430 chr22 45956660 45956892 + 16.8 0.000 intron (NM_058238, intron 1 of 3) L1ME3|LINE|L1 20386 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr22-300 chr22 41530657 41530889 + 16.8 0.000 exon (NM_001018052, exon 4 of 5) exon (NM_001018052, exon 4 of 5) 13697 NM_001018050 171568 Hs.712617 NM_138338 ENSG00000100413 POLR3H RPC22.9|RPC8 RNA polymerase III subunit H protein-coding KI270736.1-6 KI270736.1 167269 167501 + 16.8 0.000 NA NA NA NA chr10-697 chr10 74190239 74190471 + 16.8 0.000 intron (NM_001369124, intron 1 of 9) L1M4|LINE|L1 13592 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr4-373 chr4 126242965 126243197 + 16.8 0.000 Intergenic Intergenic 735822 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr8-398 chr8 62790469 62790701 + 16.8 0.000 intron (NM_001304533, intron 4 of 6) (TGTG)n|Simple_repeat|Simple_repeat -187276 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA chrX-166 chrX 24808260 24808492 + 16.8 0.000 intron (NM_016937, intron 26 of 36) MLT1L|LTR|ERVL-MaLR 63935 NR_003007 677773 Hs.689695 NR_003007 ENSG00000251869 SCARNA23 ACA12 small Cajal body-specific RNA 23 ncRNA chr10-301 chr10 6208349 6208581 + 16.8 0.000 intron (NM_001314063, intron 1 of 15) intron (NM_001314063, intron 1 of 15) 5533 NM_004566 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr1-1259 chr1 16386426 16386658 + 16.8 0.000 intron (NR_073500, intron 1 of 1) intron (NR_073500, intron 1 of 1) 19300 NR_073503 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr16-452 chr16 67967196 67967428 + 16.8 0.000 promoter-TSS (NM_001145964) promoter-TSS (NM_001145964) -518 NM_001145964 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr11-497 chr11 14259891 14260123 + 16.8 0.000 intron (NM_006108, intron 13 of 15) intron (NM_006108, intron 13 of 15) 98478 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr1-948 chr1 95882778 95883010 + 16.8 0.000 Intergenic MARNA|DNA|TcMar-Mariner -109174 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr17-591 chr17 77995307 77995539 + 16.8 0.000 Intergenic LTR41|LTR|ERVL -8814 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr1-1570 chr1 214378240 214378472 + 16.8 0.000 intron (NM_005401, intron 13 of 18) intron (NM_005401, intron 13 of 18) 97197 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr2-1128 chr2 219597447 219597679 + 16.8 0.000 promoter-TSS (NM_052902) promoter-TSS (NM_052902) -294 NM_052902 114790 Hs.22410 NM_052902 ENSG00000144589 STK11IP LIP1|LKB1IP|STK11IP1 serine/threonine kinase 11 interacting protein protein-coding chr5-670 chr5 129374012 129374244 + 16.8 0.000 Intergenic AluSx|SINE|Alu 23019 NR_039665 100616325 NR_039665 ENSG00000265691 MIR4460 - microRNA 4460 ncRNA chr22-289 chr22 37567104 37567336 + 16.8 0.000 intron (NM_152243, intron 2 of 2) MIRb|SINE|MIR 6740 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr14-427 chr14 73723896 73724128 + 16.8 0.000 intron (NM_001367710, intron 9 of 12) MIR3|SINE|MIR -9628 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr1-1364 chr1 55571889 55572121 + 16.8 0.000 Intergenic Intergenic 346364 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr18-22 chr18 61819923 61820155 + 16.8 0.000 intron (NM_173557, intron 1 of 1) AluSx1|SINE|Alu 71863 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA chr12-450 chr12 102539867 102540099 + 16.8 0.000 Intergenic Intergenic -59420 NM_001111285 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding chr14-176 chr14 88562931 88563163 + 16.8 0.000 promoter-TSS (NM_001326311) promoter-TSS (NM_001326311) 10 NM_001326302 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr6-375 chr6 122862332 122862564 + 16.8 0.000 Intergenic LTR83|LTR|ERVL 73190 NM_006714 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr15-131 chr15 73091612 73091844 + 16.8 0.000 intron (NM_002499, intron 1 of 28) AluJb|SINE|Alu 39244 NM_001172623 4756 Hs.388613 NM_002499 ENSG00000067141 NEO1 IGDCC2|NGN|NTN1R2 neogenin 1 protein-coding chr9-747 chr9 136293901 136294133 + 16.8 0.000 intron (NR_111982, intron 4 of 9) (CACA)n|Simple_repeat|Simple_repeat 10077 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr15-368 chr15 41557891 41558123 + 16.8 0.000 Intergenic Intergenic -1205 NM_006293 7301 Hs.381282 NM_006293 ENSG00000092445 TYRO3 BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif TYRO3 protein tyrosine kinase protein-coding chr4-464 chr4 153498110 153498342 + 16.8 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 31866 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr1-1325 chr1 36321368 36321600 + 16.8 0.000 TTS (NM_024676) TTS (NM_024676) 2161 NR_130899 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr4-534 chr4 30802674 30802906 + 16.8 0.000 intron (NM_032457, intron 1 of 2) L2c|LINE|L2 82421 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr1-1217 chr1 3206353 3206585 + 16.8 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 78494 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr18-202 chr18 24731701 24731933 + 16.8 0.000 intron (NR_134604, intron 2 of 2) MER77B|LTR|ERVL 6036 NR_134604 105372028 Hs.569901 NR_134604 ENSG00000266573 LOC105372028 - uncharacterized LOC105372028 ncRNA chrX-118 chrX 48755239 48755471 + 16.8 0.000 Intergenic Intergenic -6392 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding chr10-572 chr10 102067267 102067499 + 16.8 0.000 exon (NM_024747, exon 1 of 1) exon (NM_024747, exon 1 of 1) 2016 NM_024747 79803 Hs.125133 NM_024747 ENSG00000166189 HPS6 BLOC2S3 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding chr22-336 chr22 31281458 31281690 + 16.8 0.000 TTS (NM_052880) TTS (NM_052880) 10914 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr4-604 chr4 110059745 110059977 + 16.8 0.000 intron (NM_001130721, intron 3 of 4) intron (NM_001130721, intron 3 of 4) 138754 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr16-575 chr16 5071839 5072071 + 16.8 0.000 promoter-TSS (NM_001330504) promoter-TSS (NM_001330504) 146 NM_019109 56052 Hs.592086 NM_019109 ENSG00000033011 ALG1 CDG1K|HMAT1|HMT-1|HMT1|MT-1|Mat-1|hMat-1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding chr17-349 chr17 17496430 17496662 + 16.8 0.000 promoter-TSS (NM_001199989) promoter-TSS (NM_001199989) -151 NM_016084 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr18-69 chr18 69401127 69401359 + 16.8 0.000 5' UTR (NM_152721, exon 1 of 8) 5' UTR (NM_152721, exon 1 of 8) 355 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding chr15-430 chr15 72699123 72699355 + 16.8 0.000 intron (NM_033028, intron 2 of 15) AluSx3|SINE|Alu 13032 NM_033028 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr11-762 chr11 1356360 1356592 + 16.8 0.000 Intergenic Intergenic -33458 NM_001256627 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr1-1248 chr1 11858088 11858320 + 16.8 0.000 intron (NM_002521, intron 2 of 2) intron (NM_002521, intron 2 of 2) 741 NM_002521 4879 Hs.219140 NM_002521 ENSG00000120937 NPPB BNP natriuretic peptide B protein-coding chr21-70 chr21 43768375 43768607 + 16.8 0.000 Intergenic Intergenic 7884 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr20-323 chr20 19063195 19063427 + 16.8 0.000 Intergenic Intergenic -149331 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr10-451 chr10 63629683 63629915 + 16.8 0.000 Intergenic Intergenic -107909 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr7-809 chr7 113596674 113596906 + 16.8 0.000 Intergenic Intergenic 322219 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding chr15-469 chr15 91797902 91798134 + 16.8 0.000 Intergenic L1ME3A|LINE|L1 -55690 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr1-632 chr1 42951508 42951740 + 16.8 0.000 intron (NM_006516, intron 1 of 9) intron (NM_006516, intron 1 of 9) 7244 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr22-99 chr22 44762486 44762718 + 16.8 0.000 intron (NM_181335, intron 1 of 11) AluSx1|SINE|Alu 10044 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr8-572 chr8 126556654 126556886 + 16.8 0.000 non-coding (NR_156466, exon 2 of 3) non-coding (NR_156466, exon 2 of 3) 1708 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr1-1018 chr1 203667727 203667959 + 16.8 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 39906 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr4-329 chr4 10144544 10144776 + 16.8 0.000 Intergenic Intergenic -27861 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr17-279 chr17 75918865 75919097 + 16.8 0.000 intron (NM_001319193, intron 19 of 28) AluJr|SINE|Alu -13881 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr11-989 chr11 131749125 131749357 + 16.8 0.000 intron (NM_001352006, intron 2 of 9) MIRb|SINE|MIR -85685 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr2-455 chr2 75278114 75278346 + 16.8 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -78710 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr7-285 chr7 76235153 76235385 + 16.8 0.000 exon (NM_001291831, exon 2 of 16) exon (NM_001291831, exon 2 of 16) 33373 NM_001291831 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr4-522 chr4 13654624 13654856 + 16.8 0.000 promoter-TSS (NR_121681) promoter-TSS (NR_121681) -439 NR_121681 101929071 Hs.543714 NR_121681 ENSG00000250634 LINC01182 - long intergenic non-protein coding RNA 1182 ncRNA chr12-643 chr12 54389329 54389561 + 16.8 0.000 intron (NM_001130968, intron 1 of 6) intron (NM_001130968, intron 1 of 6) 1853 NM_001130967 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr5-725 chr5 157432020 157432252 + 16.8 0.000 intron (NR_136204, intron 1 of 3) Tigger2|DNA|TcMar-Tigger -27883 NM_001099287 348938 Hs.4285 NM_001099287 ENSG00000172548 NIPAL4 ARCI6|ICHTHYIN|ICHYN NIPA like domain containing 4 protein-coding chr3-454 chr3 157160221 157160453 + 16.8 0.000 5' UTR (NM_020307, exon 1 of 11) 5' UTR (NM_020307, exon 1 of 11) 423 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr1-1420 chr1 109529772 109530004 + 16.8 0.000 Intergenic Intergenic -9984 NM_031936 83873 Hs.709782 NM_031936 ENSG00000156097 GPR61 BALGR|GPCR3 G protein-coupled receptor 61 protein-coding chr4-623 chr4 127378143 127378375 + 16.6 0.000 Intergenic L1MC1|LINE|L1 -254698 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-1085 chr2 194769396 194769628 + 16.6 0.000 Intergenic L1PB1|LINE|L1 38917 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA chr1-1216 chr1 2379925 2380157 + 16.6 0.000 intron (NR_125361, intron 5 of 6) L1MB3|LINE|L1 11513 NM_024848 79906 Hs.642701 NM_024848 ENSG00000116151 MORN1 - MORN repeat containing 1 protein-coding chr16-684 chr16 83704599 83704831 + 16.6 0.000 intron (NM_001220489, intron 9 of 12) intron (NM_001220489, intron 9 of 12) 99261 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr1-1212 chr1 1504992 1505224 + 16.6 0.000 Intergenic LTR13|LTR|ERVK -7054 NM_001170535 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr11-546 chr11 8018995 8019227 + 16.6 0.000 Intergenic CpG -2602 NR_125366 103581031 Hs.249366 NR_125366 ENSG00000255420 CASC23 LINC01464 cancer susceptibility 23 ncRNA chr4-486 chr4 1754104 1754336 + 16.6 0.000 Intergenic Intergenic 32699 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr3-477 chr3 18351941 18352173 + 16.6 0.000 exon (NM_002971, exon 10 of 11) exon (NM_002971, exon 10 of 11) 73282 NM_002971 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding KI270736.1-9 KI270736.1 179425 179657 + 16.6 0.000 NA NA NA NA chr9-169 chr9 136379457 136379689 + 16.6 0.000 intron (NM_003086, intron 20 of 22) intron (NM_003086, intron 20 of 22) -5892 NM_052813 64170 Hs.694071 NM_052813 ENSG00000187796 CARD9 CANDF2|hCARD9 caspase recruitment domain family member 9 protein-coding chr4-196 chr4 145936533 145936765 + 16.6 0.000 intron (NM_178835, intron 1 of 14) CpG 2174 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr19-772 chr19 7522325 7522557 + 16.6 0.000 promoter-TSS (NM_020533) promoter-TSS (NM_020533) -183 NM_020533 57192 Hs.631858 NM_020533 ENSG00000090674 MCOLN1 MG-2|ML1|ML4|MLIV|MST080|MSTP080|TRP-ML1|TRPM-L1|TRPML1 mucolipin 1 protein-coding chr19-785 chr19 12688177 12688409 + 16.6 0.000 TTS (NM_032301) TTS (NM_032301) 295 NM_001316692 105372280 Hs.535131 NM_001316692 ENSG00000283980 GNG14 - G protein subunit gamma 14 protein-coding chr15-288 chr15 77862855 77863087 + 16.6 0.000 Intergenic Intergenic -42071 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr5-735 chr5 169630883 169631115 + 16.6 0.000 Intergenic Intergenic -6276 NM_004946 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr16-281 chr16 79281550 79281782 + 16.6 0.000 Intergenic AluSc|SINE|Alu 319071 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr10-529 chr10 8104806 8105038 + 16.6 0.000 Intergenic Intergenic 50234 NM_001002295 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr4-528 chr4 20493819 20494051 + 16.6 0.000 intron (NM_001289135, intron 9 of 35) L2c|LINE|L2 -34340 NR_029631 407000 NR_029631 ENSG00000207732 MIR218-1 MIRN218-1|mir-218-1 microRNA 218-1 ncRNA chr1-1154 chr1 151459482 151459714 + 16.6 0.000 promoter-TSS (NM_015100) promoter-TSS (NM_015100) -104 NM_001194938 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr12-697 chr12 104725666 104725898 + 16.6 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 134149 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chrX-262 chrX 105970170 105970402 + 16.6 0.000 Intergenic MLT-int|LTR|ERVL-MaLR 68441 NM_000354 6906 Hs.76838 NM_000354 ENSG00000123561 SERPINA7 TBG|TBGQTL serpin family A member 7 protein-coding chr7-615 chr7 127707497 127707729 + 16.6 0.000 exon (NM_014390, exon 9 of 24) exon (NM_014390, exon 9 of 24) 55419 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr16-591 chr16 28293332 28293564 + 16.6 0.000 intron (NM_001024401, intron 1 of 3) CpG 923 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr1-324 chr1 150099752 150099984 + 16.6 0.000 intron (NR_103998, intron 12 of 13) L1PA14|LINE|L1 32092 NM_001279354 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr2-1028 chr2 127999121 127999353 + 16.6 0.000 intron (NM_001330303, intron 10 of 19) intron (NM_001330303, intron 10 of 19) 28058 NM_001145928 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 - Sin3A associated protein 130 protein-coding chr7-806 chr7 112343878 112344110 + 16.6 0.000 TTS (NM_021994) TTS (NM_021994) -79150 NM_001197080 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding chr12-671 chr12 78474529 78474761 + 16.6 0.000 Intergenic Intergenic -114899 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr22-367 chr22 24713744 24713976 + 16.6 0.000 Intergenic Intergenic -50641 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo chr17-556 chr17 43832632 43832864 + 16.6 0.000 intron (NM_001353080, intron 2 of 20) CpG 446 NR_148344 4356 Hs.396566 NM_001932 ENSG00000161647 MPP3 DLG3 membrane palmitoylated protein 3 protein-coding chr3-907 chr3 184592408 184592640 + 16.6 0.000 Intergenic Intergenic 30739 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr18-100 chr18 8038490 8038722 + 16.6 0.000 intron (NM_002845, intron 7 of 30) AluSz6|SINE|Alu 328428 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA chr1-1460 chr1 155187972 155188204 + 16.6 0.000 intron (NM_001204291, intron 2 of 6) intron (NM_001204291, intron 2 of 6) 4821 NM_001044392 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr1-1333 chr1 39529424 39529656 + 16.6 0.000 3' UTR (NM_181809, exon 7 of 7) 3' UTR (NM_181809, exon 7 of 7) 14674 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chr15-285 chr15 75763946 75764178 + 16.6 0.000 Intergenic Intergenic -1747 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr16-238 chr16 58737823 58738055 + 16.6 0.000 Intergenic Intergenic -3623 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr9-405 chr9 27152264 27152496 + 16.6 0.000 intron (NM_001290078, intron 1 of 20) intron (NM_001290078, intron 1 of 20) 43239 NM_000459 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr1-1011 chr1 201655395 201655627 + 16.6 0.000 intron (NM_020443, intron 1 of 29) intron (NM_020443, intron 1 of 29) 7189 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr1-1395 chr1 85801631 85801863 + 16.6 0.000 intron (NM_152890, intron 47 of 59) L2c|LINE|L2 -93314 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr1-1350 chr1 46528031 46528263 + 16.6 0.000 Intergenic Intergenic 7368 NM_001357063 105378696 NM_001357063 ENSG00000282881 TMEM275 - transmembrane protein 275 protein-coding chr7-775 chr7 93921772 93922004 + 16.6 0.000 5' UTR (NM_004126, exon 1 of 2) 5' UTR (NM_004126, exon 1 of 2) 153 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr4-484 chr4 1685465 1685697 + 16.6 0.000 Intergenic Intergenic -1268 NM_001174070 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr22-419 chr22 43777168 43777400 + 16.6 0.000 intron (NM_022785, intron 3 of 31) L2a|LINE|L2 35021 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chrX-210 chrX 27463502 27463734 + 16.6 0.000 promoter-TSS (NM_207319) promoter-TSS (NM_207319) -277 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr3-353 chr3 32391902 32392134 + 16.6 0.000 exon (NM_181472, exon 1 of 4) exon (NM_181472, exon 1 of 4) 165 NM_181472 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding chr1-791 chr1 163071980 163072212 + 16.6 0.000 5' UTR (NM_001113380, exon 1 of 5) 5' UTR (NM_001113380, exon 1 of 5) 191 NM_001113380 5999 Hs.386726 NM_005613 ENSG00000117152 RGS4 RGP4|SCZD9 regulator of G protein signaling 4 protein-coding chr17-682 chr17 78250448 78250680 + 16.6 0.000 Intergenic Intergenic 19254 NM_001204211 283999 Hs.632228 NM_001145529 ENSG00000204278 TMEM235 ARGM1 transmembrane protein 235 protein-coding chr6-207 chr6 35128517 35128749 + 16.6 0.000 5' UTR (NM_001366326, exon 3 of 9) 5' UTR (NM_001366326, exon 3 of 9) 12706 NM_001261817 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr5-436 chr5 132086409 132086641 + 16.6 0.000 Intergenic Intergenic 12736 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr16-537 chr16 88732259 88732491 + 16.6 0.000 exon (NM_001142864, exon 21 of 51) exon (NM_001142864, exon 21 of 51) 1195 NR_103774 100289580 Hs.437712 NM_207451 LOC100289580 - uncharacterized LOC100289580 ncRNA chr6-642 chr6 163304473 163304705 + 16.6 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) 19884 NR_028390 285796 Hs.668693 NR_028390 ENSG00000281692 PACRG-AS1 - PACRG antisense RNA 1 ncRNA chr1-868 chr1 24743522 24743754 + 16.6 0.000 Intergenic MIRb|SINE|MIR -1809 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr16-602 chr16 30766592 30766824 + 16.6 0.000 intron (NM_001207033, intron 10 of 19) intron (NM_001207033, intron 10 of 19) 4386 NM_001286572 9810 Hs.65238 NM_014771 ENSG00000103549 RNF40 BRE1B|RBP95|STARING ring finger protein 40 protein-coding chr1-1346 chr1 44505531 44505763 + 16.6 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) -39846 NR_049849 100847089 NR_049849 ENSG00000263381 MIR5584 - microRNA 5584 ncRNA chr8-501 chr8 66033350 66033582 + 16.6 0.000 intron (NM_033105, intron 1 of 5) intron (NM_033105, intron 1 of 5) 11913 NR_146171 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr12-670 chr12 77797026 77797258 + 16.6 0.000 Intergenic Intergenic -33752 NM_001024383 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr19-870 chr19 49481382 49481614 + 16.6 0.000 intron (NM_001459, intron 8 of 8) L2b|LINE|L2 -6056 NR_073024 23521 Hs.523185 NM_012423 ENSG00000142541 RPL13A L13A|TSTA1 ribosomal protein L13a protein-coding chr3-701 chr3 11591192 11591424 + 16.6 0.000 intron (NM_001128219, intron 2 of 4) intron (NM_001128219, intron 2 of 4) -8952 NM_001128220 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr2-722 chr2 219556462 219556694 + 16.6 0.000 exon (NM_015311, exon 13 of 21) exon (NM_015311, exon 13 of 21) -7431 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr10-672 chr10 62992477 62992709 + 16.6 0.000 Intergenic Intergenic -140654 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr14-158 chr14 47751879 47752111 + 16.6 0.000 Intergenic L1ME1|LINE|L1 9109 NR_037503 100500919 NR_037503 ENSG00000263945 MIR548Y - microRNA 548y ncRNA chr1-1116 chr1 54197128 54197360 + 16.6 0.000 intron (NM_001353354, intron 1 of 6) intron (NM_001353354, intron 1 of 6) 2786 NM_001031672 606495 Hs.591426 NM_001031672 ENSG00000215883 CYB5RL - cytochrome b5 reductase like protein-coding chr1-1275 chr1 19665840 19666072 + 16.6 0.000 exon (NM_000871, exon 1 of 3) exon (NM_000871, exon 1 of 3) 1081 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr17-850 chr17 76744743 76744975 + 16.6 0.000 intron (NM_001353019, intron 8 of 13) intron (NM_001353019, intron 8 of 13) 7358 NM_001242537 79157 Hs.73965 NM_024311 ENSG00000092931 MFSD11 ET major facilitator superfamily domain containing 11 protein-coding chr8-167 chr8 99860298 99860530 + 16.6 0.000 intron (NM_017890, intron 57 of 61) intron (NM_017890, intron 57 of 61) 33293 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr7-460 chr7 2691506 2691738 + 16.6 0.000 intron (NM_001321766, intron 1 of 6) AluSx4|SINE|Alu 3420 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr1-968 chr1 150611462 150611694 + 16.6 0.000 Intergenic Intergenic 17555 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr17-549 chr17 39629747 39629979 + 16.6 0.000 intron (NM_032192, intron 3 of 6) intron (NM_032192, intron 3 of 6) 1360 NM_001242464 84152 Hs.286192 NM_032192 ENSG00000131771 PPP1R1B DARPP-32|DARPP32 protein phosphatase 1 regulatory inhibitor subunit 1B protein-coding chr1-876 chr1 26684165 26684397 + 16.6 0.000 Intergenic AluJb|SINE|Alu 9850 NR_135804 101928728 Hs.128770 NR_135804 ENSG00000260063 LOC101928728 - uncharacterized LOC101928728 ncRNA chr4-633 chr4 140037839 140038071 + 16.6 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -90060 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr4-665 chr4 165921659 165921891 + 16.6 0.000 intron (NM_001204760, intron 1 of 9) intron (NM_001204760, intron 1 of 9) 48538 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding chr1-1555 chr1 205679828 205680060 + 16.6 0.000 intron (NM_033102, intron 1 of 4) CpG 565 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr4-512 chr4 7503543 7503775 + 16.6 0.000 intron (NM_020777, intron 2 of 26) (ATGCAG)n|Simple_repeat|Simple_repeat 43631 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr10-596 chr10 3065894 3066126 + 16.6 0.000 non-coding (NR_160682, exon 2 of 2) non-coding (NR_160682, exon 2 of 2) 923 NR_160682 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr14-170 chr14 72615606 72615838 + 16.6 0.000 Intergenic Intergenic 98902 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr12-532 chr12 74365639 74365871 + 16.6 0.000 Intergenic L1PA17|LINE|L1 -73124 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr14-479 chr14 103904283 103904515 + 16.6 0.000 Intergenic Intergenic 17130 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr18-137 chr18 55997905 55998137 + 16.6 0.000 Intergenic Intergenic -44257 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chr12-119 chr12 56630231 56630463 + 16.6 0.000 promoter-TSS (NM_001300905) promoter-TSS (NM_001300905) -21 NM_001300905 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr12-599 chr12 27381271 27381503 + 16.6 0.000 intron (NM_001248003, intron 3 of 14) MSTA|LTR|ERVL-MaLR 48551 NM_001248004 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr2-865 chr2 240902060 240902292 + 16.6 0.000 Intergenic Intergenic -4160 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr22-428 chr22 45608262 45608494 + 16.6 0.000 Intergenic Intergenic -2731 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr3-898 chr3 180136923 180137155 + 16.6 0.000 Intergenic MER34C_|LTR|ERV1 -100102 NM_001256750 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding chr6-628 chr6 156827549 156827781 + 16.6 0.000 intron (NM_020732, intron 1 of 19) intron (NM_020732, intron 1 of 19) -47934 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr8-465 chr8 28985112 28985344 + 16.6 0.000 intron (NM_001324384, intron 4 of 10) MLT1A0|LTR|ERVL-MaLR 93914 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr20-83 chr20 59307736 59307968 + 16.6 0.000 intron (NM_207032, intron 2 of 4) AluJr|SINE|Alu 7241 NM_001302455 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding chr11-493 chr11 10308013 10308245 + 16.6 0.000 promoter-TSS (NR_103765) promoter-TSS (NR_103765) -184 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA KI270589.1-1 KI270589.1 42442 42674 + 16.6 0.000 NA NA NA NA chr17-782 chr17 42294449 42294681 + 16.6 0.000 intron (NM_001288718, intron 4 of 18) L2a|LINE|L2 6509 NM_001288720 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr11-501 chr11 44037357 44037589 + 16.6 0.000 Intergenic Intergenic -10508 NM_001363113 390110 Hs.558851 NM_001031854 ENSG00000205126 ACCSL - 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like protein-coding chr2-764 chr2 33467414 33467646 + 16.6 0.000 intron (NM_001349979, intron 1 of 17) Tigger16a|DNA|TcMar-Tigger -9119 NM_001349977 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding chr10-603 chr10 7410427 7410659 + 16.6 0.000 intron (NM_001029880, intron 1 of 20) CpG-2640 943 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr17-796 chr17 48361146 48361378 + 16.6 0.000 intron (NM_001075099, intron 3 of 12) AluSq2|SINE|Alu 66915 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr10-457 chr10 72553042 72553274 + 16.6 0.000 intron (NM_006077, intron 3 of 11) intron (NM_006077, intron 3 of 11) -29172 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding chr8-275 chr8 125432021 125432253 + 16.6 0.000 promoter-TSS (NM_001282985) promoter-TSS (NM_001282985) -72 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr12-431 chr12 56782478 56782710 + 16.6 0.000 intron (NM_003725, intron 3 of 4) AluJb|SINE|Alu 19270 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr16-536 chr16 87924535 87924767 + 16.6 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 11878 NR_159798 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr10-797 chr10 115795900 115796132 + 16.6 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 398773 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr11-429 chr11 43920759 43920991 + 16.6 0.000 promoter-TSS (NR_038907) promoter-TSS (NR_038907) 69 NR_038907 100507300 Hs.664588 NR_038907 ENSG00000244926 ALKBH3-AS1 - ALKBH3 antisense RNA 1 ncRNA chr1-553 chr1 89198397 89198629 + 16.4 0.000 intron (NM_052941, intron 1 of 10) intron (NM_052941, intron 1 of 10) 429 NM_052941 115361 Hs.409925 NM_052941 ENSG00000162654 GBP4 Mpa2 guanylate binding protein 4 protein-coding chrX-250 chrX 74458974 74459206 + 16.4 0.000 intron (NM_006517, intron 1 of 5) intron (NM_006517, intron 1 of 5) 37597 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr9-159 chr9 98410422 98410654 + 16.4 0.000 intron (NM_005458, intron 7 of 18) intron (NM_005458, intron 7 of 18) -154889 NR_051978 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr10-678 chr10 67766289 67766521 + 16.4 0.000 Intergenic AluSq|SINE|Alu -70210 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr6-324 chr6 15443184 15443416 + 16.4 0.000 intron (NM_004973, intron 3 of 17) intron (NM_004973, intron 3 of 17) 194445 NM_001267040 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr19-774 chr19 9621234 9621466 + 16.4 0.000 promoter-TSS (NM_152289) promoter-TSS (NM_152289) -118 NM_152289 93134 Hs.720081 NM_152289 ENSG00000171469 ZNF561 - zinc finger protein 561 protein-coding chr1-1474 chr1 157513313 157513545 + 16.4 0.000 TTS (NM_031281) TTS (NM_031281) 39086 NM_031281 83416 Hs.415950 NM_031281 ENSG00000143297 FCRL5 BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820 Fc receptor like 5 protein-coding chr4-261 chr4 102761338 102761570 + 16.4 0.000 promoter-TSS (NM_005908) promoter-TSS (NM_005908) -486 NM_005908 4126 Hs.480415 NM_005908 ENSG00000109323 MANBA MANB1 mannosidase beta protein-coding chr4-448 chr4 96636363 96636595 + 16.4 0.000 intron (NR_147149, intron 3 of 3) intron (NR_147149, intron 3 of 3) 325776 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr16-337 chr16 85378867 85379099 + 16.4 0.000 Intergenic MIRb|SINE|MIR -72658 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr10-550 chr10 70380445 70380677 + 16.4 0.000 intron (NM_001278212, intron 1 of 4) FordPrefect_a|DNA|hAT-Tip100 1005 NM_207119 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr12-603 chr12 30197545 30197777 + 16.4 0.000 Intergenic LTR43B|LTR|ERV1 -412902 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr9-256 chr9 102640478 102640710 + 16.4 0.000 intron (NR_103830, intron 3 of 4) LTR9A1|LTR|ERV1 120957 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA chr2-362 chr2 218672049 218672281 + 16.4 0.000 promoter-TSS (NM_001243313) promoter-TSS (NM_001243313) 79 NM_001243313 27148 Hs.471404 NM_015690 ENSG00000163482 STK36 FU serine/threonine kinase 36 protein-coding chr1-1421 chr1 109982271 109982503 + 16.4 0.000 Intergenic Intergenic -2378 NM_001242673 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr8-468 chr8 30229517 30229749 + 16.4 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 73264 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr18-33 chr18 32091832 32092064 + 16.4 0.000 promoter-TSS (NM_016271) promoter-TSS (NM_016271) 74 NM_016271 51444 Hs.302408 NM_016271 ENSG00000134758 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138 protein-coding chr1-1299 chr1 27444730 27444962 + 16.4 0.000 intron (NM_006990, intron 1 of 8) intron (NM_006990, intron 1 of 8) 45321 NM_006990 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr8-225 chr8 102864692 102864924 + 16.4 0.000 promoter-TSS (NM_148174) promoter-TSS (NM_148174) 537 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA chr3-169 chr3 20186180 20186412 + 16.4 0.000 promoter-TSS (NM_138484) promoter-TSS (NM_138484) -63 NM_001012413 151648 Hs.105153 NM_138484 ENSG00000129810 SGO1 CAID|NY-BR-85|SGO|SGOL1 shugoshin 1 protein-coding chr18-87 chr18 37538026 37538258 + 16.4 0.000 intron (NM_001353701, intron 1 of 1) intron (NM_001353701, intron 1 of 1) 27656 NM_001353721 56853 Hs.435976 NM_020180 ENSG00000101489 CELF4 BRUNOL4|CELF-4 CUGBP Elav-like family member 4 protein-coding chr1-1236 chr1 9338494 9338726 + 16.4 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 45716 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr6-307 chr6 163793384 163793616 + 16.4 0.000 Intergenic MER110-int|LTR|ERV1 -122016 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA chr2-944 chr2 47632049 47632281 + 16.4 0.000 Intergenic Intergenic -61834 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding chr16-661 chr16 74752096 74752328 + 16.4 0.000 intron (NM_024306, intron 1 of 6) L2b|LINE|L2 22608 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr19-623 chr19 35945952 35946184 + 16.4 0.000 3' UTR (NM_024509, exon 3 of 3) 3' UTR (NM_024509, exon 3 of 3) -1047 NR_136525 105372383 Hs.641592 NR_136525 LOC105372383 - uncharacterized LOC105372383 ncRNA chr20-207 chr20 33667995 33668227 + 16.4 0.000 exon (NM_001024675, exon 1 of 1) exon (NM_001024675, exon 1 of 1) 1168 NM_001024675 170487 Hs.592151 NM_001024675 ENSG00000182584 ACTL10 C20orf134|dJ63M2.2 actin like 10 protein-coding chr6-535 chr6 44051766 44051998 + 16.4 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 22770 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr7-560 chr7 147113187 147113419 + 16.4 0.000 intron (NM_014141, intron 4 of 22) L1PA11|LINE|L1 -15694 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr1-1577 chr1 220843769 220844001 + 16.4 0.000 intron (NR_046901, intron 1 of 2) intron (NR_046901, intron 1 of 2) 14630 NR_110797 101929730 Hs.398159 NR_110797 ENSG00000238078 LINC01352 - long intergenic non-protein coding RNA 1352 ncRNA chr12-662 chr12 67650180 67650412 + 16.4 0.000 intron (NM_006482, intron 2 of 2) intron (NM_006482, intron 2 of 2) 1551 NM_006482 8445 Hs.173135 NM_003583 ENSG00000127334 DYRK2 - dual specificity tyrosine phosphorylation regulated kinase 2 protein-coding chr17-657 chr17 58631521 58631753 + 16.4 0.000 intron (NM_031272, intron 2 of 31) intron (NM_031272, intron 2 of 31) 60418 NM_198393 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr10-564 chr10 90592823 90593055 + 16.4 0.000 Intergenic Intergenic -52134 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA chr6-532 chr6 43053033 43053265 + 16.4 0.000 TTS (NM_001300848) TTS (NM_001300848) 796 NM_014780 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chr10-760 chr10 101086671 101086903 + 16.4 0.000 Intergenic Intergenic 20488 NR_135068 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr16-320 chr16 67206957 67207189 + 16.4 0.000 TTS (NM_012163) TTS (NM_012163) -4678 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr9-451 chr9 109180093 109180325 + 16.4 0.000 intron (NM_019114, intron 24 of 25) L2b|LINE|L2 -12918 NM_014334 23732 Hs.347537 NM_014334 ENSG00000260230 FRRS1L C9orf4|CG-6|CG6|EIEE37 ferric chelate reductase 1 like protein-coding chr16-595 chr16 29854837 29855069 + 16.4 0.000 Intergenic Intergenic 8273 NM_001286585 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr17-647 chr17 40074859 40075091 + 16.4 0.000 intron (NM_001190919, intron 2 of 9) intron (NM_001190919, intron 2 of 9) 12010 NM_001190918 7067 Hs.724 NM_003250 ENSG00000126351 THRA AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1 thyroid hormone receptor alpha protein-coding chr5-580 chr5 25498528 25498760 + 16.4 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 307691 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr16-615 chr16 51224685 51224917 + 16.4 0.000 intron (NR_039672, intron 5 of 6) intron (NR_039672, intron 5 of 6) -73529 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr2-1114 chr2 213477161 213477393 + 16.4 0.000 intron (NR_047660, intron 8 of 14) LTR27D|LTR|ERV1 192813 NM_024532 79582 Hs.743365 NM_024532 ENSG00000144451 SPAG16 PF20|WDR29 sperm associated antigen 16 protein-coding chr1-1166 chr1 173258604 173258836 + 16.4 0.000 intron (NR_037845, intron 2 of 2) L1PA10|LINE|L1 -51389 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding chr20-300 chr20 1053597 1053829 + 16.4 0.000 Intergenic MIRb|SINE|MIR -51402 NM_001040007 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr19-548 chr19 732496 732728 + 16.4 0.000 intron (NM_002579, intron 5 of 8) AluSz6|SINE|Alu -18500 NM_173481 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr12-463 chr12 112617670 112617902 + 16.4 0.000 intron (NM_001347952, intron 1 of 21) AluJb|SINE|Alu 42550 NM_001347952 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding chr1-597 chr1 15337899 15338131 + 16.4 0.000 intron (NR_148918, intron 1 of 1) intron (NR_148918, intron 1 of 1) 5868 NR_148919 101927417 Hs.715313 NR_148918 ENSG00000233485 LOC101927417 - uncharacterized LOC101927417 ncRNA chr7-820 chr7 125603128 125603360 + 16.4 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR -338953 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr6-141 chr6 2989016 2989248 + 16.4 0.000 intron (NR_026856, intron 1 of 2) CpG 1165 NR_026856 401232 Hs.720158 NM_207495 LINC01011 - long intergenic non-protein coding RNA 1011 ncRNA chr8-269 chr8 100775680 100775912 + 16.4 0.000 Intergenic AluSz|SINE|Alu -53708 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr7-863 chr7 151075404 151075636 + 16.4 0.000 intron (NM_001199693, intron 19 of 21) intron (NM_001199693, intron 19 of 21) 5289 NM_006712 10922 Hs.647094 NM_006712 ENSG00000164896 FASTK FAST Fas activated serine/threonine kinase protein-coding chr9-359 chr9 90270504 90270736 + 16.4 0.000 Intergenic L1ME3B|LINE|L1 162869 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr1-1503 chr1 175072529 175072761 + 16.4 0.000 intron (NM_022093, intron 1 of 18) intron (NM_022093, intron 1 of 18) 4812 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding chr2-898 chr2 27267360 27267592 + 16.4 0.000 intron (NM_001318949, intron 1 of 8) L2a|LINE|L2 -4429 NM_003459 7781 Hs.467981 NM_003459 ENSG00000115194 SLC30A3 ZNT3 solute carrier family 30 member 3 protein-coding chr19-704 chr19 36151271 36151503 + 16.4 0.000 intron (NM_001864, intron 3 of 3) intron (NM_001864, intron 3 of 3) 1060 NM_001864 1346 Hs.421621 NM_001864 ENSG00000161281 COX7A1 COX7A|COX7AH|COX7AM cytochrome c oxidase subunit 7A1 protein-coding chr2-93 chr2 127749541 127749773 + 16.4 0.000 intron (NM_001006623, intron 7 of 7) AluSx1|SINE|Alu 48160 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding chr8-203 chr8 29459051 29459283 + 16.4 0.000 Intergenic Intergenic -108483 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr14-436 chr14 76645051 76645283 + 16.4 0.000 Intergenic Intergenic -116301 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding chr17-620 chr17 9014449 9014681 + 16.4 0.000 Intergenic MIRc|SINE|MIR -6945 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr10-373 chr10 36172524 36172756 + 16.4 0.000 Intergenic Intergenic 394338 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr4-681 chr4 186367468 186367700 + 16.4 0.000 intron (NR_033900, intron 1 of 3) intron (NR_033900, intron 1 of 3) 101395 NM_001354804 2160 Hs.1430 NM_000128 ENSG00000088926 F11 FXI|PTA coagulation factor XI protein-coding chr1-279 chr1 100687361 100687593 + 16.4 0.000 Intergenic L1PB1|LINE|L1 -32163 NM_080682 7412 Hs.109225 NM_001078 ENSG00000162692 VCAM1 CD106|INCAM-100 vascular cell adhesion molecule 1 protein-coding chr3-550 chr3 129279555 129279787 + 16.4 0.000 intron (NM_001006109, intron 1 of 6) intron (NM_001006109, intron 1 of 6) 677 NM_001370344 56941 Hs.458320 NM_020187 ENSG00000183624 HMCES C3orf37|DC12|SRAPD1 5-hydroxymethylcytosine binding, ES cell specific protein-coding chr14-198 chr14 104892542 104892774 + 16.4 0.000 intron (NM_001112726, intron 13 of 18) intron (NM_001112726, intron 13 of 18) 27344 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr5-709 chr5 149175452 149175684 + 16.4 0.000 intron (NM_001370418, intron 1 of 18) intron (NM_001370418, intron 1 of 18) 33837 NM_001301015 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chrX-182 chrX 73214701 73214933 + 16.4 0.000 promoter-TSS (NM_021963) promoter-TSS (NM_021963) 34 NM_021963 4674 Hs.66180 NM_021963 ENSG00000186462 NAP1L2 BPX nucleosome assembly protein 1 like 2 protein-coding chr7-516 chr7 101169707 101169939 + 16.4 0.000 TTS (NM_198571) TTS (NM_198571) -4254 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chrX-102 chrX 3184313 3184545 + 16.4 0.000 Intergenic Intergenic -87391 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr11-503 chr11 59573225 59573457 + 16.4 0.000 Intergenic MIR|SINE|MIR 21817 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr17-779 chr17 41678804 41679036 + 16.4 0.000 Intergenic LTR73|LTR|ERV1 -9965 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chrX-194 chrX 140423864 140424096 + 16.4 0.000 Intergenic MLT2B1|LTR|ERVL 81080 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr3-545 chr3 128493500 128493732 + 16.4 0.000 promoter-TSS (NM_032638) promoter-TSS (NM_032638) -429 NM_032638 2624 Hs.367725 NM_032638 ENSG00000179348 GATA2 DCML|IMD21|MONOMAC|NFE1B GATA binding protein 2 protein-coding chr5-292 chr5 138339081 138339313 + 16.4 0.000 promoter-TSS (NM_001287583) promoter-TSS (NM_001287583) -842 NM_001364026 995 Hs.656 NM_001790 ENSG00000158402 CDC25C CDC25|PPP1R60 cell division cycle 25C protein-coding chr14-401 chr14 56422787 56423019 + 16.4 0.000 Intergenic Intergenic -91428 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA chr2-910 chr2 32697148 32697380 + 16.4 0.000 intron (NM_017735, intron 9 of 19) intron (NM_017735, intron 9 of 19) 62009 NR_039922 100616219 NR_039922 ENSG00000265057 MIR4765 - microRNA 4765 ncRNA chr7-620 chr7 132306118 132306350 + 16.4 0.000 intron (NM_020911, intron 3 of 31) intron (NM_020911, intron 3 of 31) 45373 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr13-149 chr13 75549172 75549404 + 16.4 0.000 promoter-TSS (NM_001270952) promoter-TSS (NM_001270952) 151 NM_001287394 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding chr17-882 chr17 82097172 82097404 + 16.4 0.000 intron (NM_004104, intron 1 of 42) intron (NM_004104, intron 1 of 42) 948 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr3-711 chr3 14094188 14094420 + 16.4 0.000 Intergenic Intergenic 30566 NM_001098502 131474 Hs.517815 NM_144636 ENSG00000163528 CHCHD4 MIA40|TIMM40 coiled-coil-helix-coiled-coil-helix domain containing 4 protein-coding chr8-452 chr8 23411454 23411686 + 16.4 0.000 Intergenic Intergenic -7450 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr12-701 chr12 107294075 107294307 + 16.4 0.000 Intergenic MER102a|DNA|hAT-Charlie -24243 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr10-519 chr10 133334984 133335216 + 16.4 0.000 intron (NM_001321617, intron 1 of 5) CpG 1796 NM_001321617 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr14-485 chr14 104707203 104707435 + 16.4 0.000 exon (NM_022489, exon 8 of 23) exon (NM_022489, exon 8 of 23) -16878 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr6-559 chr6 83151214 83151446 + 16.4 0.000 non-coding (NR_159812, exon 15 of 15) non-coding (NR_159812, exon 15 of 15) 41935 NM_001367286 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr5-404 chr5 72116013 72116245 + 16.4 0.000 intron (NM_005909, intron 2 of 6) (GA)n|Simple_repeat|Simple_repeat 8654 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding chr1-428 chr1 181088596 181088828 + 16.4 0.000 promoter-TSS (NM_016545) promoter-TSS (NM_016545) 12 NM_016545 51278 Hs.15725 NM_016545 ENSG00000162783 IER5 SBBI48 immediate early response 5 protein-coding chr2-395 chr2 120540012 120540244 + 16.4 0.000 Intergenic Intergenic -73779 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr9-667 chr9 121040826 121041058 + 16.2 0.000 intron (NM_001735, intron 3 of 40) AluSz|SINE|Alu 9333 NM_001317164 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr9-533 chr9 99720593 99720825 + 16.2 0.000 intron (NR_109802, intron 2 of 6) MLT1J-int|LTR|ERVL-MaLR 99180 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr13-178 chr13 49219947 49220179 + 16.2 0.000 promoter-TSS (NM_001507) promoter-TSS (NM_001507) -275 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr11-629 chr11 82370537 82370769 + 16.2 0.000 intron (NR_120571, intron 1 of 7) LTR16E2|LTR|ERVL 33260 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr4-599 chr4 107323383 107323615 + 16.2 0.000 Intergenic L1PA12|LINE|L1 -287186 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding chr12-678 chr12 88309289 88309521 + 16.2 0.000 Intergenic L2c|LINE|L2 167098 NM_001366580 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding chr9-560 chr9 136861345 136861577 + 16.2 0.000 TTS (NM_001281297) TTS (NM_001281297) 4847 NM_003792 8721 Hs.174050 NM_003792 ENSG00000107223 EDF1 CFAP280|EDF-1|MBF1 endothelial differentiation related factor 1 protein-coding chr14-408 chr14 61755778 61756010 + 16.2 0.000 Intergenic MER4A|LTR|ERV1 -4797 NR_144368 105370526 Hs.661638 NR_144368 ENSG00000258667 HIF1A-AS3 - HIF1A antisense RNA 3 ncRNA chr4-672 chr4 182307740 182307972 + 16.2 0.000 intron (NM_001080477, intron 1 of 27) intron (NM_001080477, intron 1 of 27) 64454 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chrX-218 chrX 39012717 39012949 + 16.2 0.000 Intergenic Intergenic -208950 NR_046706 100874211 Hs.662789 NR_046706 MID1IP1-AS1 - MID1IP1 antisense RNA 1 ncRNA chr2-543 chr2 108845346 108845578 + 16.2 0.000 intron (NM_144978, intron 11 of 14) intron (NM_144978, intron 11 of 14) 58691 NR_147236 165055 Hs.362702 NM_144978 ENSG00000163006 CCDC138 - coiled-coil domain containing 138 protein-coding chr10-467 chr10 80627105 80627337 + 16.2 0.000 intron (NM_207372, intron 6 of 6) intron (NM_207372, intron 6 of 6) -22576 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA chr20-221 chr20 36862123 36862355 + 16.2 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 1299 NM_080627 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr7-833 chr7 130865874 130866106 + 16.2 0.000 Intergenic Intergenic 10820 NR_029503 407021 NR_029503 ENSG00000284032 MIR29A MIRN29|MIRN29A|hsa-mir-29|hsa-mir-29a|miRNA29A|mir-29a microRNA 29a ncRNA chr13-84 chr13 109263186 109263418 + 16.2 0.000 Intergenic AluSz|SINE|Alu -95999 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr18-184 chr18 7020506 7020738 + 16.2 0.000 intron (NM_005559, intron 19 of 62) intron (NM_005559, intron 19 of 62) 65945 NR_126040 101927188 Hs.680444 NR_126040 ENSG00000265069 LOC101927188 - uncharacterized LOC101927188 ncRNA chr14-209 chr14 41549952 41550184 + 16.2 0.000 Intergenic MER39|LTR|ERV1 -56788 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr1-1547 chr1 203736468 203736700 + 16.2 0.000 intron (NM_001001396, intron 21 of 21) intron (NM_001001396, intron 21 of 21) 6007 NR_046213 84719 Hs.661178 NM_032633 LINC00260 C1orf217|NCRNA00260 long intergenic non-protein coding RNA 260 ncRNA chr3-355 chr3 33454877 33455109 + 16.2 0.000 Intergenic AluSp|SINE|Alu -14588 NM_014517 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding chr2-1039 chr2 146495403 146495635 + 16.2 0.000 Intergenic THE1D|LTR|ERVL-MaLR -91538 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr8-322 chr8 78535348 78535580 + 16.2 0.000 non-coding (NR_125389, exon 3 of 3) non-coding (NR_125389, exon 3 of 3) 19124 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr11-470 chr11 93234684 93234916 + 16.2 0.000 Intergenic Intergenic -36809 NM_152313 120103 Hs.148766 NM_152313 ENSG00000180773 SLC36A4 PAT4 solute carrier family 36 member 4 protein-coding chr11-494 chr11 10693234 10693466 + 16.2 0.000 intron (NM_001100163, intron 1 of 20) intron (NM_001100163, intron 1 of 20) 224 NM_001100167 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr9-682 chr9 124677541 124677773 + 16.2 0.000 intron (NR_038975, intron 1 of 1) L1ME3|LINE|L1 -14785 NR_029611 406954 NR_029611 ENSG00000207595 MIR181A2 MIRN181A|MIRN181A2|hsa-mir-181a-2|mir-181a-2 microRNA 181a-2 ncRNA chrX-84 chrX 133415615 133415847 + 16.2 0.000 promoter-TSS (NM_001448) promoter-TSS (NM_001448) -242 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chrX-280 chrX 130666079 130666311 + 16.2 0.000 intron (NM_006375, intron 8 of 14) intron (NM_006375, intron 8 of 14) -136441 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr2-1151 chr2 237968616 237968848 + 16.2 0.000 promoter-TSS (NM_001278305) promoter-TSS (NM_001278305) -61 NM_001278305 140739 Hs.471785 NM_080678 ENSG00000184182 UBE2F NCE2 ubiquitin conjugating enzyme E2 F (putative) protein-coding chr4-231 chr4 2573539 2573771 + 16.2 0.000 intron (NM_001366318, intron 1 of 20) intron (NM_001366318, intron 1 of 20) 37008 NM_001366318 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr2-51 chr2 102142626 102142858 + 16.2 0.000 promoter-TSS (NM_000877) promoter-TSS (NM_000877) -4 NM_000877 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr4-454 chr4 116829361 116829593 + 16.2 0.000 Intergenic L1PA10|LINE|L1 256099 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr3-761 chr3 50639132 50639364 + 16.2 0.000 intron (NM_004635, intron 2 of 10) MIR|SINE|MIR 22097 NM_001243925 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr10-540 chr10 32938972 32939204 + 16.2 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) -3530 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr1-1061 chr1 246005109 246005341 + 16.2 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 412187 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr7-482 chr7 45689152 45689384 + 16.2 0.000 intron (NM_021116, intron 14 of 19) intron (NM_021116, intron 14 of 19) 79750 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr21-124 chr21 10575185 10575417 + 16.2 0.000 intron (NM_199260, intron 12 of 21) L1PA12|LINE|L1 53787 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr7-726 chr7 55020660 55020892 + 16.2 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 1744 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr17-645 chr17 39939526 39939758 + 16.2 0.000 Intergenic L2c|LINE|L2 -1832 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr8-407 chr8 102390879 102391111 + 16.2 0.000 intron (NM_001282873, intron 1 of 58) AluJb|SINE|Alu 21694 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding chr17-319 chr17 57519304 57519536 + 16.2 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 4177 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr11-797 chr11 23455473 23455705 + 16.2 0.000 Intergenic Intergenic -36399 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr2-514 chr2 233459885 233460117 + 16.2 0.000 intron (NM_152879, intron 23 of 29) intron (NM_152879, intron 23 of 29) 71847 NM_003648 8527 Hs.471675 NM_003648 ENSG00000077044 DGKD DGKdelta|dgkd-2 diacylglycerol kinase delta protein-coding chr6-505 chr6 17045735 17045967 + 16.2 0.000 Intergenic Intergenic -56407 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr10-521 chr10 133419260 133419492 + 16.2 0.000 intron (NM_138384, intron 9 of 10) intron (NM_138384, intron 9 of 10) 5241 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr10-772 chr10 103111442 103111674 + 16.2 0.000 intron (NM_001351194, intron 2 of 17) intron (NM_001351194, intron 2 of 17) 42263 NM_001351191 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr4-642 chr4 145279644 145279876 + 16.2 0.000 Intergenic Intergenic 60659 NR_147156 105377466 Hs.405641 NR_147156 ENSG00000272727 LINC02266 - long intergenic non-protein coding RNA 2266 ncRNA chr11-911 chr11 76334151 76334383 + 16.2 0.000 Intergenic Intergenic 46698 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr2-1080 chr2 186800009 186800241 + 16.2 0.000 Intergenic L1PA15|LINE|L1 49045 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr19-716 chr19 45542496 45542728 + 16.2 0.000 intron (NM_001017989, intron 1 of 1) Tigger3a|DNA|TcMar-Tigger 35133 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr9-332 chr9 133135369 133135601 + 16.2 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -4328 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr12-360 chr12 89709581 89709813 + 16.2 0.000 promoter-TSS (NM_001366525) promoter-TSS (NM_001366525) -331 NM_001001323 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding chr21-148 chr21 37677013 37677245 + 16.2 0.000 intron (NM_002240, intron 3 of 3) intron (NM_002240, intron 3 of 3) 239328 NM_002240 3763 Hs.626242 NM_002240 ENSG00000157542 KCNJ6 BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2 potassium voltage-gated channel subfamily J member 6 protein-coding chr7-610 chr7 123518340 123518572 + 16.2 0.000 intron (NR_104245, intron 1 of 11) L2a|LINE|L2 14492 NM_001282855 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr2-758 chr2 25043177 25043409 + 16.2 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 830 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr4-437 chr4 59748514 59748746 + 16.2 0.000 Intergenic L1PA16|LINE|L1 735057 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr13-321 chr13 85799274 85799506 + 16.2 0.000 promoter-TSS (NM_032229) promoter-TSS (NM_032229) 29 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding KI270442.1-4 KI270442.1 172821 173053 + 16.2 0.000 NA NA NA NA chr19-767 chr19 5493112 5493344 + 16.2 0.000 Intergenic Intergenic 37811 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr3-728 chr3 28078021 28078253 + 16.2 0.000 Intergenic Intergenic -163482 NM_001331186 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr4-368 chr4 110609253 110609485 + 16.2 0.000 intron (NR_147204, intron 1 of 3) intron (NR_147204, intron 1 of 3) 6089 NR_147203 110231149 Hs.436030 NR_147203 ENSG00000250103 PANCR - PITX2 adjacent non-coding RNA ncRNA chr8-204 chr8 30215823 30216055 + 16.2 0.000 Intergenic Intergenic 59570 NM_006571 10671 Hs.158427 NM_006571 ENSG00000104671 DCTN6 WS-3|WS3|p27 dynactin subunit 6 protein-coding chr10-699 chr10 75137933 75138165 + 16.2 0.000 intron (NM_144660, intron 1 of 4) LTR67B|LTR|ERVL 26393 NM_144660 142891 Hs.744986 NM_144660 ENSG00000156671 SAMD8 HEL-177|SMSr sterile alpha motif domain containing 8 protein-coding chr7-392 chr7 128937517 128937749 + 16.2 0.000 promoter-TSS (NM_032643) promoter-TSS (NM_032643) -294 NM_001098630 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr6-518 chr6 25747206 25747438 + 16.2 0.000 Intergenic Intergenic -7377 NM_001286121 10050 Hs.282931 NM_005495 ENSG00000146039 SLC17A4 KAIA2138 solute carrier family 17 member 4 protein-coding chr8-536 chr8 99013043 99013275 + 16.2 0.000 promoter-TSS (NM_152564) promoter-TSS (NM_152564) -107 NM_181661 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr9-571 chr9 7277253 7277485 + 16.2 0.000 Intergenic AluSz6|SINE|Alu 520019 NR_148677 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr9-429 chr9 85859907 85860139 + 16.2 0.000 Intergenic Intergenic 54021 NR_029410 389765 Hs.715986 NR_029410 LOC389765 - kinesin family member 27 pseudogene pseudo chr4-607 chr4 112693329 112693561 + 16.2 0.000 Intergenic Intergenic -12573 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr7-487 chr7 54831342 54831574 + 16.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger 72145 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr8-289 chr8 22358761 22358993 + 16.2 0.000 Intergenic MER44B|DNA|TcMar-Tigger -8401 NM_001351655 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr20-281 chr20 47146888 47147120 + 16.2 0.000 intron (NM_172110, intron 10 of 13) L2a|LINE|L2 -19963 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA chr3-891 chr3 167308879 167309111 + 16.2 0.000 intron (NM_001199202, intron 16 of 20) MER66B|LTR|ERV1 71288 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding chr5-531 chr5 142069335 142069567 + 16.2 0.000 Intergenic AluJo|SINE|Alu -39328 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr7-662 chr7 6170002 6170234 + 16.2 0.000 intron (NM_001367581, intron 10 of 13) intron (NM_001367581, intron 10 of 13) 2019 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr18-86 chr18 24987584 24987816 + 16.2 0.000 non-coding (NR_146903, exon 1 of 2) non-coding (NR_146903, exon 1 of 2) 279 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr14-248 chr14 33165336 33165568 + 16.2 0.000 intron (NM_001164749, intron 2 of 11) intron (NM_001164749, intron 2 of 11) 226573 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr3-781 chr3 61469355 61469587 + 16.2 0.000 Intergenic L1MC1|LINE|L1 -92100 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr17-329 chr17 74357433 74357665 + 16.2 0.000 exon (NM_001080466, exon 3 of 3) exon (NM_001080466, exon 3 of 3) 4319 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr2-893 chr2 22944978 22945210 + 16.2 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 408615 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr18-67 chr18 55589756 55589988 + 16.2 0.000 promoter-TSS (NM_001369582) promoter-TSS (NM_001369582) -61 NM_001369586 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr19-432 chr19 12870581 12870813 + 16.2 0.000 intron (NM_014975, intron 22 of 25) MIR|SINE|MIR 10752 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr8-538 chr8 101993382 101993614 + 16.2 0.000 intron (NR_126152, intron 3 of 4) intron (NR_126152, intron 3 of 4) 9066 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr21-160 chr21 44285597 44285829 + 16.2 0.000 promoter-TSS (NM_000383) promoter-TSS (NM_000383) -163 NM_000383 326 Hs.129829 NM_000383 ENSG00000160224 AIRE AIRE1|APECED|APS1|APSI|PGA1 autoimmune regulator protein-coding chr4-333 chr4 15041125 15041357 + 16.2 0.000 intron (NM_001177383, intron 5 of 10) intron (NM_001177383, intron 5 of 10) 38760 NM_182485 132864 Hs.656937 NM_182485 ENSG00000137449 CPEB2 CPE-BP2|CPEB-2|hCPEB-2 cytoplasmic polyadenylation element binding protein 2 protein-coding chr11-913 chr11 77007424 77007656 + 16.2 0.000 intron (NM_001300953, intron 6 of 9) L1MDa|LINE|L1 -26858 NM_138706 192134 Hs.352622 NM_138706 ENSG00000198488 B3GNT6 B3Gn-T6|BGnT-6|beta-1,3-Gn-T6|beta3Gn-T6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 protein-coding chr12-629 chr12 50353821 50354053 + 16.0 0.000 exon (NM_001145475, exon 4 of 8) exon (NM_001145475, exon 4 of 8) 42672 NM_001145475 121006 Hs.133187 NM_001145475 ENSG00000185958 FAM186A - family with sequence similarity 186 member A protein-coding chr1-1055 chr1 241519083 241519315 + 16.0 0.000 intron (NM_000143, intron 1 of 9) CpG 586 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding chr8-296 chr8 26405235 26405467 + 16.0 0.000 intron (NM_004331, intron 3 of 5) intron (NM_004331, intron 3 of 5) 14938 NM_001330491 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr4-560 chr4 67885921 67886153 + 16.0 0.000 Intergenic Intergenic -2035 NM_004262 9407 Hs.132195 NM_004262 ENSG00000153802 TMPRSS11D HAT transmembrane serine protease 11D protein-coding chr1-1360 chr1 54651946 54652178 + 16.0 0.000 intron (NM_001039464, intron 2 of 23) intron (NM_001039464, intron 2 of 23) 10276 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr10-696 chr10 74177305 74177537 + 16.0 0.000 intron (NM_001369124, intron 1 of 9) intron (NM_001369124, intron 1 of 9) 658 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding chr17-725 chr17 8145779 8146011 + 16.0 0.000 promoter-TSS (NR_106943) promoter-TSS (NR_106943) -824 NR_106943 102465532 NR_106943 ENSG00000284117 MIR6883 hsa-mir-6883 microRNA 6883 ncRNA chr5-715 chr5 150147235 150147467 + 16.0 0.000 intron (NM_002609, intron 1 of 22) intron (NM_002609, intron 1 of 22) 8494 NR_149150 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr1-1494 chr1 166906074 166906306 + 16.0 0.000 Intergenic Intergenic -29926 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding chr11-688 chr11 64038420 64038652 + 16.0 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) 52683 NR_003089 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr12-382 chr12 779885 780117 + 16.0 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 27078 NM_213655 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr17-687 chr17 79148794 79149026 + 16.0 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 73973 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr15-212 chr15 64071523 64071755 + 16.0 0.000 TTS (NR_110310) TTS (NR_110310) 22199 NM_032231 84191 Hs.439548 NM_032231 ENSG00000166797 CIAO2A CIA2A|FAM96A cytosolic iron-sulfur assembly component 2A protein-coding chr4-503 chr4 5423719 5423951 + 16.0 0.000 intron (NM_001306082, intron 7 of 12) MER52A|LTR|ERV1 -100734 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chr19-606 chr19 18261924 18262156 + 16.0 0.000 intron (NM_001145305, intron 3 of 3) intron (NM_001145305, intron 3 of 3) -6621 NR_036575 729966 Hs.710873 NR_036575 ENSG00000284797 LOC729966 - uncharacterized LOC729966 ncRNA chr4-462 chr4 150965586 150965818 + 16.0 0.000 intron (NM_001367550, intron 2 of 56) AluJb|SINE|Alu 49565 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr3-647 chr3 81728872 81729104 + 16.0 0.000 intron (NM_000158, intron 1 of 15) ERVL-E-int|LTR|ERVL 32657 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr15-422 chr15 70362812 70363044 + 16.0 0.000 Intergenic Intergenic 143000 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr12-216 chr12 52590076 52590308 + 16.0 0.000 intron (NM_001146226, intron 5 of 7) intron (NM_001146226, intron 5 of 7) 11271 NM_001146225 140807 Hs.662013 NM_080747 ENSG00000170486 KRT72 K6IRS2|K6irs|KRT6|KRT6IRS2 keratin 72 protein-coding chr2-650 chr2 105375251 105375483 + 16.0 0.000 intron (NM_001450, intron 2 of 5) intron (NM_001450, intron 2 of 5) 23684 NM_001039492 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr1-1606 chr1 235999377 235999609 + 16.0 0.000 intron (NM_002508, intron 12 of 19) intron (NM_002508, intron 12 of 19) 65597 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr11-492 chr11 6048732 6048964 + 16.0 0.000 Intergenic AluSz|SINE|Alu -21107 NM_001001917 120796 Hs.553543 NM_001001917 ENSG00000180934 OR56A1 OR11-75 olfactory receptor family 56 subfamily A member 1 protein-coding chr6-377 chr6 125749397 125749629 + 16.0 0.000 promoter-TSS (NM_012259) promoter-TSS (NM_012259) -119 NM_012259 23493 Hs.144287 NM_012259 ENSG00000135547 HEY2 CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32 hes related family bHLH transcription factor with YRPW motif 2 protein-coding chr15-335 chr15 77840633 77840865 + 16.0 0.000 Intergenic Intergenic -19849 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr5-739 chr5 172642176 172642408 + 16.0 0.000 intron (NM_001308177, intron 1 of 3) MIRb|SINE|MIR 1029 NM_001308177 54492 Hs.91521 NM_001142651 ENSG00000214357 NEURL1B NEURL3|RNF67B|hNeur2|neur2 neuralized E3 ubiquitin protein ligase 1B protein-coding chr2-1117 chr2 215751182 215751414 + 16.0 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 33255 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr3-475 chr3 15317027 15317259 + 16.0 0.000 intron (NM_001018009, intron 2 of 8) intron (NM_001018009, intron 2 of 8) 15443 NM_004844 9467 Hs.257761 NM_004844 ENSG00000131370 SH3BP5 SAB|SH3BP-5 SH3 domain binding protein 5 protein-coding chr11-929 chr11 86940335 86940567 + 16.0 0.000 intron (NR_120591, intron 3 of 4) intron (NR_120591, intron 3 of 4) 14944 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr15-345 chr15 96356712 96356944 + 16.0 0.000 Intergenic Intergenic 23063 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr11-292 chr11 68311148 68311380 + 16.0 0.000 Intergenic Intergenic -1327 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr14-278 chr14 54576911 54577143 + 16.0 0.000 intron (NM_015589, intron 1 of 11) LTR16E2|LTR|ERVL 9415 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr1-972 chr1 151301778 151302010 + 16.0 0.000 exon (NM_001369624, exon 8 of 12) exon (NM_001369624, exon 8 of 12) 19595 NM_020832 57592 Hs.186756 NM_020832 ENSG00000143373 ZNF687 PDB6 zinc finger protein 687 protein-coding chr7-761 chr7 77542422 77542654 + 16.0 0.000 intron (NM_001131009, intron 1 of 16) intron (NM_001131009, intron 1 of 16) 4495 NM_001131008 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chrX-257 chrX 83746470 83746702 + 16.0 0.000 Intergenic THE1B|LTR|ERVL-MaLR -114540 NM_001271680 1538 Hs.444230 NM_021118 ENSG00000183035 CYLC1 CYCL1 cylicin 1 protein-coding chr2-709 chr2 203195045 203195277 + 16.0 0.000 intron (NM_001114132, intron 46 of 54) AluY|SINE|Alu -43280 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr12-408 chr12 43806268 43806500 + 16.0 0.000 promoter-TSS (NR_073473) promoter-TSS (NR_073473) -67 NM_001242397 5756 Hs.189075 NM_002822 ENSG00000151239 TWF1 A6|PTK9 twinfilin actin binding protein 1 protein-coding chr1-1392 chr1 85258582 85258814 + 16.0 0.000 exon (NM_198077, exon 2 of 3) exon (NM_198077, exon 2 of 3) 964 NM_198077 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr5-402 chr5 68534721 68534953 + 16.0 0.000 Intergenic Intergenic 242260 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr17-854 chr17 78356428 78356660 + 16.0 0.000 TTS (NM_003955) TTS (NM_003955) 3535 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr9-426 chr9 77712790 77713022 + 16.0 0.000 Intergenic Intergenic -64584 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr15-385 chr15 48877850 48878082 + 16.0 0.000 promoter-TSS (NM_014335) promoter-TSS (NM_014335) -168 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr10-421 chr10 12333646 12333878 + 16.0 0.000 Intergenic Intergenic -15785 NM_020397 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr16-574 chr16 4703031 4703263 + 16.0 0.000 intron (NR_040252, intron 7 of 16) AluJr|SINE|Alu 9429 NM_001370586 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr12-628 chr12 50188425 50188657 + 16.0 0.000 intron (NM_001243775, intron 3 of 4) intron (NM_001243775, intron 3 of 4) 12992 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chr13-235 chr13 98214332 98214564 + 16.0 0.000 intron (NM_005766, intron 2 of 26) Tigger16a|DNA|TcMar-Tigger 5924 NR_036129 100422881 NR_036129 ENSG00000263399 MIR3170 mir-3170 microRNA 3170 ncRNA chr18-128 chr18 41391658 41391890 + 16.0 0.000 Intergenic Intergenic 128903 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr22-406 chr22 40197117 40197349 + 16.0 0.000 intron (NM_015088, intron 1 of 20) intron (NM_015088, intron 1 of 20) 19308 NM_015088 23112 Hs.372082 NM_015088 ENSG00000100354 TNRC6B - trinucleotide repeat containing adaptor 6B protein-coding chr11-643 chr11 112226269 112226501 + 16.0 0.000 promoter-TSS (NM_000317) promoter-TSS (NM_000317) -43 NM_000317 5805 Hs.503860 NM_000317 ENSG00000150787 PTS PTPS 6-pyruvoyltetrahydropterin synthase protein-coding chr7-512 chr7 100015408 100015640 + 16.0 0.000 promoter-TSS (NM_001287055) promoter-TSS (NM_001287055) -28 NM_001287055 7586 Hs.615360 NM_003439 ENSG00000106261 ZKSCAN1 KOX18|PHZ-37|ZNF139|ZNF36|ZSCAN33 zinc finger with KRAB and SCAN domains 1 protein-coding chr9-302 chr9 109011269 109011501 + 16.0 0.000 intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 2114 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr3-595 chr3 252372 252604 + 16.0 0.000 intron (NM_001253387, intron 2 of 26) MIRc|SINE|MIR 54599 NR_045572 10752 Hs.148909 NM_006614 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1 like protein-coding chr3-603 chr3 13225138 13225370 + 16.0 0.000 Intergenic Intergenic -151825 NM_001134382 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr8-241 chr8 140590871 140591103 + 16.0 0.000 intron (NM_001164623, intron 1 of 17) intron (NM_001164623, intron 1 of 17) 44646 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr7-525 chr7 107958914 107959146 + 16.0 0.000 intron (NM_002291, intron 20 of 33) L2a|LINE|L2 44131 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding chr1-729 chr1 16175812 16176044 + 16.0 0.000 Intergenic Intergenic -19859 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr5-655 chr5 109304407 109304639 + 16.0 0.000 intron (NR_149040, intron 3 of 3) intron (NR_149040, intron 3 of 3) 21846 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr2-509 chr2 223943963 223944195 + 16.0 0.000 intron (NM_020830, intron 1 of 11) MER113|DNA|hAT-Charlie 1256 NM_020830 57590 Hs.368359 NM_020830 ENSG00000085449 WDFY1 FENS-1|FENS1|WDF1|ZFYVE17 WD repeat and FYVE domain containing 1 protein-coding chr21-121 chr21 46226216 46226448 + 16.0 0.000 intron (NM_001001438, intron 3 of 22) intron (NM_001001438, intron 3 of 22) 2442 NM_001145436 4047 Hs.596543 NM_002340 ENSG00000160285 LSS CTRCT44|HYPT14|OSC lanosterol synthase protein-coding chr12-587 chr12 17204228 17204460 + 16.0 0.000 Intergenic MER52A|LTR|ERV1 215597 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo chr4-183 chr4 83535711 83535943 + 16.0 0.000 promoter-TSS (NM_001256422) promoter-TSS (NM_001256422) -87 NM_001256422 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding chr17-283 chr17 81294616 81294848 + 16.0 0.000 intron (NM_001037984, intron 1 of 15) CpG 575 NM_138570 124565 Hs.352240 NM_138570 ENSG00000157637 SLC38A10 PP1744 solute carrier family 38 member 10 protein-coding chr11-864 chr11 65979332 65979564 + 16.0 0.000 3' UTR (NM_005146, exon 20 of 20) 3' UTR (NM_005146, exon 20 of 20) 17714 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr19-660 chr19 493391 493623 + 16.0 0.000 Intergenic Intergenic -2979 NM_130760 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding chr17-862 chr17 79005309 79005541 + 16.0 0.000 intron (NM_001159772, intron 1 of 5) intron (NM_001159772, intron 1 of 5) 4339 NM_138793 124583 Hs.8859 NM_138793 ENSG00000171302 CANT1 DBQD|DBQD1|EDM7|SCAN-1|SCAN1|SHAPY calcium activated nucleotidase 1 protein-coding chr1-761 chr1 64317394 64317626 + 16.0 0.000 Intergenic L1MA9|LINE|L1 113887 NM_001366235 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding chr9-652 chr9 111004573 111004805 + 16.0 0.000 intron (NM_001351397, intron 1 of 4) L2b|LINE|L2 32091 NM_001351420 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr3-571 chr3 160921004 160921236 + 16.0 0.000 intron (NR_134243, intron 2 of 5) intron (NR_134243, intron 2 of 5) 50522 NR_134243 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr3-634 chr3 53377640 53377872 + 16.0 0.000 Intergenic L2a|LINE|L2 -30213 NM_001290206 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding chr8-580 chr8 130364485 130364717 + 16.0 0.000 intron (NM_001247996, intron 2 of 30) intron (NM_001247996, intron 2 of 30) -68068 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr3-703 chr3 12014810 12015042 + 16.0 0.000 intron (NM_133625, intron 1 of 12) intron (NM_133625, intron 1 of 12) 10535 NM_133625 6854 Hs.445503 NM_003178 ENSG00000157152 SYN2 SYNII synapsin II protein-coding chr20-276 chr20 38308078 38308310 + 16.0 0.000 intron (NM_001725, intron 2 of 14) MLT1K|LTR|ERVL-MaLR 4044 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr14-321 chr14 102362505 102362737 + 16.0 0.000 promoter-TSS (NM_001172631) promoter-TSS (NM_001172631) 269 NM_032630 51550 Hs.129634 NM_032630 ENSG00000100865 CINP - cyclin dependent kinase 2 interacting protein protein-coding chr7-783 chr7 100199666 100199898 + 16.0 0.000 TTS (NM_178831) TTS (NM_178831) -19466 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr7-653 chr7 3686195 3686427 + 16.0 0.000 intron (NM_152744, intron 4 of 44) AluSq|SINE|Alu 385059 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding chr7-842 chr7 134737638 134737870 + 16.0 0.000 Intergenic L1MEd|LINE|L1 -41880 NM_033138 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr10-456 chr10 71806213 71806445 + 16.0 0.000 intron (NM_001171934, intron 10 of 21) intron (NM_001171934, intron 10 of 21) -5554 NM_001171936 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr6-490 chr6 7992336 7992568 + 16.0 0.000 intron (NR_037616, intron 4 of 12) intron (NR_037616, intron 4 of 12) 6350 NR_027712 206426 Hs.676966 NR_027712 PIP5K1P1 - phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1 pseudo chr13-67 chr13 28658958 28659190 + 16.0 0.000 promoter-TSS (NM_015932) promoter-TSS (NM_015932) -56 NM_015932 51371 Hs.268742 NM_015932 ENSG00000132963 POMP C13orf12|HSPC014|PNAS-110|PRAAS2|UMP1 proteasome maturation protein protein-coding chr17-258 chr17 81116383 81116615 + 16.0 0.000 TTS (NM_004920) TTS (NM_004920) 8874 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr9-195 chr9 129139854 129140086 + 16.0 0.000 intron (NM_178001, intron 9 of 10) intron (NM_178001, intron 9 of 10) 28282 NM_001193397 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr15-262 chr15 57947479 57947711 + 16.0 0.000 Intergenic Intergenic 66428 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr14-314 chr14 99359230 99359462 + 16.0 0.000 Intergenic L1PA10|LINE|L1 -87149 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr12-549 chr12 124410706 124410938 + 16.0 0.000 intron (NM_001077261, intron 15 of 47) intron (NM_001077261, intron 15 of 47) -73580 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr14-220 chr14 68793368 68793600 + 16.0 0.000 5' UTR (NM_004926, exon 1 of 2) 5' UTR (NM_004926, exon 1 of 2) 430 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr12-723 chr12 116881154 116881386 + 16.0 0.000 exon (NM_003806, exon 1 of 2) exon (NM_003806, exon 1 of 2) 171 NR_073189 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr1-887 chr1 34818408 34818640 + 16.0 0.000 Intergenic FRAM|SINE|Alu 25525 NM_002060 2701 Hs.296310 NM_002060 ENSG00000187513 GJA4 CX37 gap junction protein alpha 4 protein-coding chr8-528 chr8 92689959 92690191 + 16.0 0.000 Intergenic L1MB7|LINE|L1 -34581 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr15-463 chr15 89743037 89743269 + 16.0 0.000 intron (NM_001284395, intron 16 of 16) L2b|LINE|L2 8156 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr16-572 chr16 4273631 4273863 + 16.0 0.000 promoter-TSS (NM_003223) promoter-TSS (NM_003223) -724 NM_003223 7023 Hs.513305 NM_003223 ENSG00000090447 TFAP4 AP-4|bHLHc41 transcription factor AP-4 protein-coding chr4-417 chr4 10172593 10172825 + 15.9 0.000 Intergenic HERVK9-int|LTR|ERVK -55910 NM_017491 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr11-896 chr11 73194168 73194400 + 15.9 0.000 Intergenic Intergenic -23997 NM_176072 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr20-314 chr20 9262990 9263222 + 15.9 0.000 intron (NM_182797, intron 1 of 35) MLT1O|LTR|ERVL-MaLR -44694 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr5-514 chr5 111757454 111757686 + 15.9 0.000 promoter-TSS (NM_001142482) promoter-TSS (NM_001142482) -15 NM_001142480 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr8-432 chr8 391955 392187 + 15.9 0.000 Intergenic Intergenic -8897 NR_103537 157693 Hs.591390 NR_103537 ENSG00000182366 FAM87A - family with sequence similarity 87 member A ncRNA chr21-126 chr21 14319810 14320042 + 15.9 0.000 Intergenic Intergenic 46127 NR_003088 150000 Hs.366575 NM_138726 ENSG00000243064 ABCC13 ABCC13P|C21orf73|PRED6 ATP binding cassette subfamily C member 13 (pseudogene) pseudo chr1-1109 chr1 47772538 47772770 + 15.9 0.000 intron (NM_001194986, intron 6 of 6) intron (NM_001194986, intron 6 of 6) 224731 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr6-427 chr6 34889342 34889574 + 15.9 0.000 exon (NM_015245, exon 1 of 24) exon (NM_015245, exon 1 of 24) 203 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr18-57 chr18 684012 684244 + 15.9 0.000 intron (NR_148709, intron 9 of 14) AluY|SINE|Alu -25837 NM_001012716 494514 Hs.274959 NM_001012716 TYMSOS C18orf56 TYMS opposite strand protein-coding chr5-543 chr5 158384844 158385076 + 15.9 0.000 intron (NR_109888, intron 1 of 6) MLT1J|LTR|ERVL-MaLR 24813 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr3-623 chr3 43286285 43286517 + 15.9 0.000 promoter-TSS (NM_017719) promoter-TSS (NM_017719) -111 NM_001330750 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr15-439 chr15 75202492 75202724 + 15.9 0.000 intron (NM_015492, intron 1 of 2) CpG 726 NM_015492 56905 Hs.17936 NM_015492 ENSG00000167173 C15orf39 - chromosome 15 open reading frame 39 protein-coding chr12-694 chr12 103839002 103839234 + 15.9 0.000 intron (NM_001031701, intron 1 of 13) L1MD2|LINE|L1 2116 NM_001031701 51559 Hs.48428 NM_016575 ENSG00000111696 NT5DC3 TU12B1-TY|TU12B1TY 5'-nucleotidase domain containing 3 protein-coding chr4-518 chr4 10066305 10066537 + 15.9 0.000 Intergenic Intergenic 12271 NR_036090 100423011 NR_036090 ENSG00000264931 MIR3138 mir-3138 microRNA 3138 ncRNA chr10-274 chr10 3296065 3296297 + 15.9 0.000 Intergenic Intergenic -22514 NR_131187 105376360 Hs.212226 NR_131187 LOC105376360 - uncharacterized LOC105376360 ncRNA chr1-1084 chr1 14591996 14592228 + 15.9 0.000 Intergenic Intergenic -6573 NM_001370230 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr17-723 chr17 7703970 7704202 + 15.9 0.000 TTS (NM_001143990) TTS (NM_001143990) -1116 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr10-705 chr10 77207665 77207897 + 15.9 0.000 intron (NM_001271519, intron 3 of 28) intron (NM_001271519, intron 3 of 28) 66950 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr8-338 chr8 101659011 101659243 + 15.9 0.000 intron (NM_024915, intron 14 of 15) Charlie4a|DNA|hAT-Charlie 131842 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr4-483 chr4 1234042 1234274 + 15.9 0.000 intron (NM_001012614, intron 3 of 9) intron (NM_001012614, intron 3 of 9) 14972 NM_001328 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding GL000216.2-1 GL000216.2 159484 159716 + 15.9 0.000 NA NA NA NA chr6-557 chr6 81553404 81553636 + 15.9 0.000 Intergenic Intergenic 199161 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding GL000225.1-11 GL000225.1 13704 13936 + 15.9 0.000 NA NA NA NA chr8-302 chr8 38770298 38770530 + 15.9 0.000 intron (NM_001352804, intron 1 of 10) intron (NM_001352804, intron 1 of 10) 13139 NM_001352804 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr19-813 chr19 21903189 21903421 + 15.9 0.000 Intergenic THE1D|LTR|ERVL-MaLR -51237 NM_001256653 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chr2-1108 chr2 206981830 206982062 + 15.9 0.000 Intergenic Intergenic 42428 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding chr9-435 chr9 94374403 94374635 + 15.9 0.000 promoter-TSS (NM_032558) promoter-TSS (NM_032558) -50 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding KI270733.1-6 KI270733.1 124674 124906 + 15.9 0.000 NA NA NA NA chr5-504 chr5 75534147 75534379 + 15.9 0.000 intron (NM_001345921, intron 1 of 13) AluSz|SINE|Alu -22282 NM_001130105 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding chr6-610 chr6 142842804 142843036 + 15.9 0.000 intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 102256 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr3-848 chr3 136506903 136507135 + 15.9 0.000 intron (NM_005862, intron 7 of 33) MIR|SINE|MIR 245359 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr2-484 chr2 151560392 151560624 + 15.9 0.000 intron (NM_001271208, intron 124 of 182) intron (NM_001271208, intron 124 of 182) 150606 NM_001177663 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr7-474 chr7 40221948 40222180 + 15.9 0.000 intron (NM_024728, intron 6 of 14) intron (NM_024728, intron 6 of 14) 87088 NM_024728 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding chr2-501 chr2 200889116 200889348 + 15.9 0.000 promoter-TSS (NM_021824) promoter-TSS (NM_021824) -95 NM_001142355 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding chr16-634 chr16 65415696 65415928 + 15.9 0.000 intron (NR_027755, intron 2 of 8) intron (NR_027755, intron 2 of 8) 160488 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chrX-200 chrX 7139182 7139414 + 15.9 0.000 intron (NM_001135565, intron 1 of 4) intron (NM_001135565, intron 1 of 4) -7992 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr1-1485 chr1 163321765 163321997 + 15.9 0.000 promoter-TSS (NM_031423) promoter-TSS (NM_031423) -73 NM_145697 83540 Hs.651950 NM_031423 ENSG00000143228 NUF2 CDCA1|CT106|NUF2R NUF2 component of NDC80 kinetochore complex protein-coding chr7-734 chr7 55506910 55507142 + 15.9 0.000 intron (NM_001321242, intron 2 of 4) intron (NM_001321242, intron 2 of 4) 19854 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr15-171 chr15 48748488 48748720 + 15.9 0.000 exon (NM_001194998, exon 22 of 27) exon (NM_001194998, exon 22 of 27) 62465 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr2-757 chr2 24304521 24304753 + 15.9 0.000 intron (NM_001348182, intron 8 of 38) intron (NM_001348182, intron 8 of 38) 55899 NM_001348185 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr7-838 chr7 133481784 133482016 + 15.9 0.000 intron (NM_021807, intron 9 of 17) intron (NM_021807, intron 9 of 17) 191019 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA chr11-342 chr11 16934159 16934391 + 15.9 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -8253 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr2-790 chr2 86440746 86440978 + 15.9 0.000 promoter-TSS (NM_001146688) promoter-TSS (NM_001146688) -509 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr9-206 chr9 17082524 17082756 + 15.9 0.000 Intergenic Intergenic -52400 NM_001286984 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr2-979 chr2 75277232 75277464 + 15.9 0.000 Intergenic Intergenic -77828 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr4-156 chr4 86594196 86594428 + 15.9 0.000 promoter-TSS (NM_006264) promoter-TSS (NM_006264) -3 NM_080684 5783 Hs.436142 NM_006264 ENSG00000163629 PTPN13 FAP-1|PNP1|PTP-BAS|PTP-BL|PTP1E|PTPL1|PTPLE|hPTP1E protein tyrosine phosphatase non-receptor type 13 protein-coding chr1-1452 chr1 153687015 153687247 + 15.9 0.000 intron (NM_000906, intron 12 of 21) intron (NM_000906, intron 12 of 21) 2662 NR_107050 102466879 NR_107050 ENSG00000274940 MIR8083 hsa-mir-8083 microRNA 8083 ncRNA chr1-934 chr1 66332477 66332709 + 15.9 0.000 exon (NM_001297441, exon 7 of 16) exon (NM_001297441, exon 7 of 16) 485 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr11-947 chr11 108958708 108958940 + 15.9 0.000 Intergenic Intergenic 293755 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr17-462 chr17 7709383 7709615 + 15.9 0.000 exon (NM_001406, exon 5 of 5) exon (NM_001406, exon 5 of 5) 4297 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr16-445 chr16 65699002 65699234 + 15.9 0.000 Intergenic Intergenic -122818 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr7-586 chr7 56046763 56046995 + 15.9 0.000 intron (NM_001370522, intron 1 of 8) LTR40c|LTR|ERVL 4565 NM_001370505 5723 Hs.512656 NM_004577 ENSG00000146733 PSPH PSP|PSPHD phosphoserine phosphatase protein-coding chrX-272 chrX 119705145 119705377 + 15.9 0.000 Intergenic L2c|LINE|L2 -12093 NM_145800 23157 Hs.496666 NM_015129 ENSG00000125354 SEPTIN6 SEP2|SEPT2|SEPT6 septin 6 protein-coding chr6-413 chr6 167766221 167766453 + 15.9 0.000 Intergenic Intergenic -29192 NR_149041 441179 Hs.192711 NR_149041 ENSG00000269155 LOC441179 - uncharacterized LOC441179 ncRNA chr1-681 chr1 179293855 179294087 + 15.9 0.000 intron (NR_045530, intron 1 of 13) CpG 174 NR_045530 6646 Hs.445588 NM_003101 ENSG00000057252 SOAT1 ACACT|ACAT|ACAT-1|ACAT1|SOAT|STAT sterol O-acyltransferase 1 protein-coding chr8-372 chr8 144544842 144545074 + 15.9 0.000 intron (NM_025251, intron 5 of 10) intron (NM_025251, intron 5 of 10) -15847 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr16-297 chr16 4211939 4212171 + 15.9 0.000 intron (NM_001323668, intron 1 of 6) intron (NM_001323668, intron 1 of 6) 30025 NM_001098814 6345 Hs.10041 NM_001098814 ENSG00000185739 SRL SAR sarcalumenin protein-coding chr7-441 chr7 128948135 128948367 + 15.9 0.000 exon (NM_001347928, exon 8 of 9) exon (NM_001347928, exon 8 of 9) 6983 NM_001364314 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr22-276 chr22 29654439 29654671 + 15.9 0.000 intron (NM_181833, intron 4 of 4) intron (NM_181833, intron 4 of 4) 50922 NR_156186 4771 Hs.187898 NM_000268 ENSG00000186575 NF2 ACN|BANF|SCH neurofibromin 2 protein-coding chr10-663 chr10 49114845 49115077 + 15.9 0.000 intron (NM_001031746, intron 1 of 7) intron (NM_001031746, intron 1 of 7) 561 NM_001031746 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding chr11-795 chr11 18772203 18772435 + 15.9 0.000 intron (NM_006906, intron 1 of 14) MLT1N2|LTR|ERVL-MaLR 19479 NM_001278238 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr3-847 chr3 135166517 135166749 + 15.9 0.000 intron (NM_004441, intron 8 of 15) intron (NM_004441, intron 8 of 15) 371373 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr15-480 chr15 98684530 98684762 + 15.9 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -33425 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr3-527 chr3 111851741 111851973 + 15.9 0.000 intron (NM_001134437, intron 2 of 17) L2c|LINE|L2 -7323 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr1-1495 chr1 167128609 167128841 + 15.9 0.000 3' UTR (NM_001080426, exon 6 of 6) 3' UTR (NM_001080426, exon 6 of 6) 34650 NM_001080426 92235 Hs.632462 NM_001080426 ENSG00000198842 DUSP27 - dual specificity phosphatase 27, atypical protein-coding chr2-833 chr2 190062062 190062294 + 15.9 0.000 intron (NM_005259, intron 1 of 2) intron (NM_005259, intron 1 of 2) 551 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr14-445 chr14 88332286 88332518 + 15.9 0.000 Intergenic Intergenic -5490 NM_021161 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr4-506 chr4 5836508 5836740 + 15.9 0.000 intron (NM_001014809, intron 10 of 13) intron (NM_001014809, intron 10 of 13) 51189 NM_001288662 1400 Hs.135270 NM_001313 ENSG00000072832 CRMP1 CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 collapsin response mediator protein 1 protein-coding chr10-757 chr10 100167697 100167929 + 15.9 0.000 intron (NR_144757, intron 5 of 10) intron (NR_144757, intron 5 of 10) 18216 NR_144760 10613 Hs.150087 NM_006459 ENSG00000107566 ERLIN1 C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62 ER lipid raft associated 1 protein-coding chr3-824 chr3 115438340 115438572 + 15.9 0.000 Intergenic LTR16|LTR|ERVL -185054 NM_002045 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr21-85 chr21 7257804 7258036 + 15.9 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -172717 NM_001322036 102724951 Hs.743984 NM_001322036 LOC102724951 - uncharacterized LOC102724951 protein-coding chr6-640 chr6 162452912 162453144 + 15.9 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -274104 NM_152410 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr22-349 chr22 43141364 43141596 + 15.9 0.000 intron (NM_014507, intron 1 of 2) intron (NM_014507, intron 1 of 2) 1917 NR_046423 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr1-662 chr1 145233084 145233316 + 15.9 0.000 Intergenic Intergenic 8999 NM_001164261 645142 Hs.730589 NM_001164261 ENSG00000256374 PPIAL4D - peptidylprolyl isomerase A like 4D protein-coding chrX-237 chrX 51291426 51291658 + 15.9 0.000 Intergenic Intergenic -40689 NM_153183 170685 Hs.375178 NM_153183 ENSG00000122824 NUDT10 APS2|DIPP3-alpha|DIPP3a nudix hydrolase 10 protein-coding chr1-1311 chr1 30237481 30237713 + 15.9 0.000 Intergenic MSTA|LTR|ERVL-MaLR -199985 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr5-377 chr5 17406662 17406894 + 15.9 0.000 intron (NR_134274, intron 1 of 1) MIRc|SINE|MIR 2632 NR_134274 101929544 Hs.23725 NR_134273 ENSG00000248455 LINC02217 - long intergenic non-protein coding RNA 2217 ncRNA chr3-700 chr3 11549656 11549888 + 15.9 0.000 intron (NM_001349238, intron 17 of 17) L1ME2|LINE|L1 19026 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr9-502 chr9 136838914 136839146 + 15.9 0.000 exon (NM_024718, exon 11 of 15) exon (NM_024718, exon 11 of 15) -3448 NM_001080482 389813 NM_001080482 ENSG00000232434 AJM1 C9orf172|ajm-1 apical junction component 1 homolog protein-coding chr1-935 chr1 67750252 67750484 + 15.9 0.000 intron (NM_018841, intron 2 of 3) intron (NM_018841, intron 2 of 3) 65167 NM_001199741 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr11-358 chr11 67240613 67240845 + 15.9 0.000 intron (NM_001256405, intron 1 of 9) intron (NM_001256405, intron 1 of 9) 715 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr1-1268 chr1 19044522 19044754 + 15.9 0.000 Intergenic Intergenic -87962 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr2-1004 chr2 105860481 105860713 + 15.9 0.000 intron (NM_001004722, intron 3 of 3) intron (NM_001004722, intron 3 of 3) 8750 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr4-255 chr4 85828075 85828307 + 15.9 0.000 intron (NM_001287805, intron 1 of 7) intron (NM_001287805, intron 1 of 7) 254 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr19-633 chr19 44635928 44636160 + 15.9 0.000 intron (NM_001205280, intron 4 of 4) MLT1H|LTR|ERVL-MaLR -7754 NM_001135770 5817 Hs.171844 NM_006505 ENSG00000073008 PVR CD155|HVED|NECL5|Necl-5|PVS|TAGE4 PVR cell adhesion molecule protein-coding chr20-343 chr20 36275922 36276154 + 15.9 0.000 Intergenic Intergenic -30301 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr17-506 chr17 2884209 2884441 + 15.9 0.000 intron (NM_001330058, intron 2 of 24) intron (NM_001330058, intron 2 of 24) 81570 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr3-811 chr3 99674580 99674812 + 15.9 0.000 intron (NM_020351, intron 1 of 3) intron (NM_020351, intron 1 of 3) 36102 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding chr7-812 chr7 116862636 116862868 + 15.9 0.000 intron (NM_006136, intron 1 of 9) CpG 165 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr1-1199 chr1 240414233 240414465 + 15.9 0.000 intron (NM_020066, intron 15 of 17) MIR1_Amn|SINE|MIR 197806 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding chr7-706 chr7 44374474 44374706 + 15.9 0.000 Intergenic Intergenic -48959 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr1-1260 chr1 16440243 16440475 + 15.9 0.000 promoter-TSS (NM_001145278) promoter-TSS (NM_001145278) -313 NM_001145278 55707 Hs.437385 NM_018090 ENSG00000157191 NECAP2 - NECAP endocytosis associated 2 protein-coding chr7-572 chr7 6154670 6154902 + 15.9 0.000 exon (NM_001365764, exon 15 of 16) exon (NM_001365764, exon 15 of 16) 17351 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr15-477 chr15 93621810 93622042 + 15.9 0.000 Intergenic AluSx1|SINE|Alu -234634 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA chr22-266 chr22 21918314 21918546 + 15.9 0.000 TTS (NM_014634) TTS (NM_014634) -19807 NR_147620 100286925 Hs.659180 NR_147620 LOC100286925 - uncharacterized LOC100286925 ncRNA chr1-1541 chr1 202203094 202203326 + 15.9 0.000 promoter-TSS (NM_021636) promoter-TSS (NM_021636) -502 NM_021636 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr19-673 chr19 5803849 5804081 + 15.9 0.000 Intergenic CpG -12802 NM_001161619 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr16-481 chr16 89863560 89863792 + 15.9 0.000 intron (NM_032451, intron 11 of 14) intron (NM_032451, intron 11 of 14) -9916 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr1-720 chr1 1916205 1916437 + 15.9 0.000 intron (NM_138705, intron 2 of 5) intron (NM_138705, intron 2 of 5) 1061 NM_138705 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr6-520 chr6 35253273 35253505 + 15.9 0.000 TTS (NM_152753) TTS (NM_152753) -6346 NM_003427 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr1-1401 chr1 87754450 87754682 + 15.9 0.000 Intergenic L2a|LINE|L2 -382911 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr16-674 chr16 80887533 80887765 + 15.9 0.000 intron (NR_131948, intron 1 of 2) MLT1A0|LTR|ERVL-MaLR 4947 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr9-661 chr9 115400858 115401090 + 15.9 0.000 intron (NR_163556, intron 6 of 7) intron (NR_163556, intron 6 of 7) 259156 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr5-573 chr5 14744074 14744306 + 15.9 0.000 intron (NM_054027, intron 7 of 11) intron (NM_054027, intron 7 of 11) 31496 NR_046285 100130744 Hs.660550 NR_046285 LOC100130744 - uncharacterized LOC100130744 ncRNA chr22-353 chr22 46027080 46027312 + 15.9 0.000 Intergenic Intergenic 17672 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr2-552 chr2 172427839 172428071 + 15.9 0.000 exon (NM_001365529, exon 1 of 25) exon (NM_001365529, exon 1 of 25) 369 NM_001365529 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr10-793 chr10 113326716 113326948 + 15.9 0.000 Intergenic Intergenic 197561 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr19-763 chr19 4927923 4928155 + 15.9 0.000 intron (NM_001290051, intron 2 of 16) intron (NM_001290051, intron 2 of 16) -4648 NR_039902 100616337 NR_039902 ENSG00000263409 MIR4747 mir-4747 microRNA 4747 ncRNA chr14-320 chr14 101481615 101481847 + 15.9 0.000 Intergenic L1MEd|LINE|L1 39655 NR_135240 100507277 Hs.123543 NR_135240 ENSG00000259082 LINC02314 - long intergenic non-protein coding RNA 2314 ncRNA chr1-852 chr1 19168926 19169158 + 15.7 0.000 intron (NM_020765, intron 27 of 105) intron (NM_020765, intron 27 of 105) 41224 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr9-497 chr9 134690437 134690669 + 15.7 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -37710 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr16-612 chr16 47731169 47731401 + 15.7 0.000 Intergenic Intergenic -127296 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA chr18-107 chr18 74161617 74161849 + 15.7 0.000 Intergenic Intergenic 13210 NM_014177 29090 Hs.532835 NM_014177 ENSG00000075336 TIMM21 C18orf55|HSPC154|TIM21 translocase of inner mitochondrial membrane 21 protein-coding chr12-679 chr12 88325395 88325627 + 15.7 0.000 Intergenic Intergenic 183204 NM_001366580 160418 Hs.331268 NM_181783 ENSG00000139324 TMTC3 LIS8|SMILE transmembrane O-mannosyltransferase targeting cadherins 3 protein-coding KI270736.1-5 KI270736.1 174234 174466 + 15.7 0.000 NA NA NA NA chr22-443 chr22 49908088 49908320 + 15.7 0.000 intron (NM_024105, intron 6 of 9) intron (NM_024105, intron 6 of 9) 10234 NM_024105 79087 Hs.526711 NM_024105 ENSG00000182858 ALG12 CDG1G|ECM39|PP14673|hALG12 ALG12 alpha-1,6-mannosyltransferase protein-coding chr17-551 chr17 41894831 41895063 + 15.7 0.000 intron (NM_198830, intron 13 of 27) intron (NM_198830, intron 13 of 27) 24004 NM_001096 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr13-344 chr13 110371734 110371966 + 15.7 0.000 intron (NM_001846, intron 4 of 47) intron (NM_001846, intron 4 of 47) 30892 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr15-347 chr15 98954423 98954655 + 15.7 0.000 intron (NM_000875, intron 20 of 20) intron (NM_000875, intron 20 of 20) 51117 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chr1-1302 chr1 27772240 27772472 + 15.7 0.000 promoter-TSS (NM_177424) promoter-TSS (NM_177424) -863 NM_177424 23673 Hs.523855 NM_177424 ENSG00000117758 STX12 STX13|STX14 syntaxin 12 protein-coding chr2-1154 chr2 238747213 238747445 + 15.7 0.000 Intergenic Intergenic 100578 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr14-450 chr14 89673849 89674081 + 15.7 0.000 Intergenic MIRb|SINE|MIR -54800 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr14-307 chr14 77306705 77306937 + 15.7 0.000 intron (NM_013382, intron 2 of 20) intron (NM_013382, intron 2 of 20) 14061 NM_013382 29954 Hs.132989 NM_013382 ENSG00000009830 POMT2 LGMD2N|LGMDR14|MDDGA2|MDDGB2|MDDGC2 protein O-mannosyltransferase 2 protein-coding chr10-634 chr10 31157390 31157622 + 15.7 0.000 Intergenic Intergenic -30377 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA chr18-130 chr18 46916857 46917089 + 15.7 0.000 promoter-TSS (NM_001353901) promoter-TSS (NM_001353901) 534 NM_001324058 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr12-283 chr12 19601494 19601726 + 15.7 0.000 Intergenic Intergenic 161011 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr8-588 chr8 138352313 138352545 + 15.7 0.000 intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 144832 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding chr15-310 chr15 39887949 39888181 + 15.7 0.000 intron (NM_001271854, intron 1 of 3) MER34A1|LTR|ERV1 32827 NM_007223 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr3-533 chr3 118681742 118681974 + 15.7 0.000 intron (NR_135547, intron 1 of 3) LTR9|LTR|ERV1 40090 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr7-222 chr7 586634 586866 + 15.7 0.000 intron (NM_001164760, intron 7 of 10) intron (NM_001164760, intron 7 of 10) -16095 NR_110054 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr22-429 chr22 45896295 45896527 + 15.7 0.000 Intergenic MIRb|SINE|MIR 80751 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr19-494 chr19 44754195 44754427 + 15.7 0.000 intron (NM_005178, intron 2 of 8) intron (NM_005178, intron 2 of 8) -4346 NR_107052 102465879 NR_107052 ENSG00000284258 MIR8085 hsa-mir-8085 microRNA 8085 ncRNA chr17-398 chr17 38911622 38911854 + 15.7 0.000 intron (NR_073384, intron 5 of 7) intron (NR_073384, intron 5 of 7) -3241 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr19-695 chr19 19270151 19270383 + 15.7 0.000 exon (NM_001001524, exon 4 of 10) exon (NM_001001524, exon 4 of 10) 3034 NM_001001524 53345 Hs.531624 NM_203510 ENSG00000213996 TM6SF2 - transmembrane 6 superfamily member 2 protein-coding chr1-1343 chr1 43472884 43473116 + 15.7 0.000 Intergenic LTR33|LTR|ERVL -19011 NM_001190880 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr3-868 chr3 152175336 152175568 + 15.7 0.000 intron (NR_136178, intron 1 of 2) intron (NR_136178, intron 1 of 2) 29977 NR_136178 101928166 NR_136178 LOC101928166 - uncharacterized LOC101928166 ncRNA chr20-305 chr20 3149329 3149561 + 15.7 0.000 intron (NM_021826, intron 1 of 1) intron (NM_021826, intron 1 of 1) 10420 NM_014948 22888 Hs.654646 NM_014948 ENSG00000185019 UBOX5 RNF37|UBCE7IP5|UIP5|hUIP5 U-box domain containing 5 protein-coding chr20-295 chr20 63818119 63818351 + 15.7 0.000 intron (NR_110081, intron 1 of 2) intron (NR_110081, intron 1 of 2) 10159 NR_110081 101928604 Hs.676054 NR_110081 ZBTB46-AS1 - ZBTB46 antisense RNA 1 ncRNA chr3-248 chr3 50321209 50321441 + 15.7 0.000 intron (NM_003773, intron 1 of 3) CpG 1420 NM_003773 8692 Hs.76873 NM_003773 ENSG00000068001 HYAL2 LUCA2 hyaluronidase 2 protein-coding chr10-44 chr10 41898827 41899059 + 15.7 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 469102 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr1-575 chr1 203351160 203351392 + 15.7 0.000 promoter-TSS (NM_002023) promoter-TSS (NM_002023) -154 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr7-305 chr7 134891529 134891761 + 15.7 0.000 exon (NM_033140, exon 1 of 12) exon (NM_033140, exon 1 of 12) 187 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr11-976 chr11 122716948 122717180 + 15.7 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 61342 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr2-1105 chr2 203960971 203961203 + 15.7 0.000 3' UTR (NM_012092, exon 5 of 5) 3' UTR (NM_012092, exon 5 of 5) 24339 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr2-299 chr2 30422045 30422277 + 15.7 0.000 Intergenic Intergenic -25085 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding chr7-754 chr7 73345493 73345725 + 15.7 0.000 intron (NM_001362789, intron 7 of 7) L3|LINE|CR1 17448 NM_001281304 8468 Hs.661266 NM_003602 ENSG00000077800 FKBP6 FKBP36 FKBP prolyl isomerase 6 protein-coding chr1-637 chr1 48102030 48102262 + 15.7 0.000 intron (NR_026749, intron 9 of 9) AluSx1|SINE|Alu 80282 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo chr8-586 chr8 134150383 134150615 + 15.7 0.000 Intergenic Intergenic 264003 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr9-413 chr9 34084102 34084334 + 15.7 0.000 Intergenic Intergenic -35019 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr20-357 chr20 40865948 40866180 + 15.7 0.000 Intergenic L2|LINE|L2 -114649 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr3-746 chr3 41239739 41239971 + 15.7 0.000 3' UTR (NM_001330729, exon 17 of 17) 3' UTR (NM_001330729, exon 17 of 17) 40350 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr2-1116 chr2 214944642 214944874 + 15.7 0.000 intron (NR_103740, intron 51 of 54) intron (NR_103740, intron 51 of 54) 87328 NM_015657 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr8-213 chr8 58658933 58659165 + 15.7 0.000 intron (NM_003580, intron 1 of 30) CpG 358 NM_001144772 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr11-531 chr11 121728498 121728730 + 15.7 0.000 Intergenic Intergenic 276300 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr17-144 chr17 21988619 21988851 + 15.7 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -214260 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr5-58 chr5 128083671 128083903 + 15.7 0.000 promoter-TSS (NR_046207) promoter-TSS (NR_046207) 21 NR_046207 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr19-345 chr19 45455789 45456021 + 15.7 0.000 Intergenic Intergenic -4358 NM_001369413 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr6-542 chr6 56814632 56814864 + 15.7 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 28917 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr4-491 chr4 2537293 2537525 + 15.7 0.000 intron (NM_001366318, intron 1 of 20) CpG-20895 762 NM_001366318 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding KI270730.1-6 KI270730.1 92422 92654 + 15.7 0.000 NA NA NA NA chr10-491 chr10 109313506 109313738 + 15.7 0.000 Intergenic HERVL-int|LTR|ERVL 609624 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr20-356 chr20 39377644 39377876 + 15.7 0.000 Intergenic Intergenic -153012 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA chr19-565 chr19 3219881 3220113 + 15.7 0.000 Intergenic AluJo|SINE|Alu -4664 NM_021938 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr16-327 chr16 70251189 70251421 + 15.7 0.000 exon (NM_058219, exon 1 of 1) exon (NM_058219, exon 1 of 1) 635 NM_058219 118460 Hs.660633 NM_058219 ENSG00000223496 EXOSC6 EAP4|MTR3|Mtr3p|hMtr3p|p11 exosome component 6 protein-coding chr19-407 chr19 46945037 46945269 + 15.7 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -74684 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr17-728 chr17 10284412 10284644 + 15.7 0.000 Intergenic AluJr|SINE|Alu -85922 NM_201433 8522 Hs.462214 NM_003644 ENSG00000007237 GAS7 - growth arrest specific 7 protein-coding chr11-799 chr11 26188621 26188853 + 15.7 0.000 promoter-TSS (NM_001313726) promoter-TSS (NM_001313726) -386 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding chr4-539 chr4 39319753 39319985 + 15.7 0.000 intron (NM_001204747, intron 9 of 24) MER44B|DNA|TcMar-Tigger 46493 NM_001363496 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr4-299 chr4 110198396 110198628 + 15.7 0.000 5' UTR (NM_024090, exon 1 of 4) 5' UTR (NM_024090, exon 1 of 4) 103 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr6-645 chr6 167157827 167158059 + 15.7 0.000 promoter-TSS (NM_005299) promoter-TSS (NM_005299) -112 NM_005299 2853 Hs.248124 NM_005299 ENSG00000120436 GPR31 12-HETER|HETER|HETER1 G protein-coupled receptor 31 protein-coding chr8-517 chr8 82480424 82480656 + 15.7 0.000 Intergenic MIR1_Amn|SINE|MIR -431564 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr3-204 chr3 101779132 101779364 + 15.7 0.000 promoter-TSS (NM_001348998) promoter-TSS (NM_001348998) 37 NR_145993 91775 Hs.595933 NM_145037 ENSG00000144815 NXPE3 FAM55C|MST115|MSTP115 neurexophilin and PC-esterase domain family member 3 protein-coding chr4-499 chr4 3494597 3494829 + 15.7 0.000 TTS (NM_001164673) TTS (NM_001164673) 10169 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr11-723 chr11 110616997 110617229 + 15.7 0.000 intron (NM_020809, intron 5 of 15) L1ME3A|LINE|L1 94712 NM_001258415 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding chr12-340 chr12 13196452 13196684 + 15.7 0.000 promoter-TSS (NM_001423) promoter-TSS (NM_001423) -158 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr9-643 chr9 99541446 99541678 + 15.7 0.000 Intergenic Intergenic -166305 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr4-209 chr4 24584479 24584711 + 15.7 0.000 promoter-TSS (NM_001358) promoter-TSS (NM_001358) -41 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr22-403 chr22 39519985 39520217 + 15.7 0.000 promoter-TSS (NM_001675) promoter-TSS (NM_001675) -458 NM_001675 468 Hs.496487 NM_001675 ENSG00000128272 ATF4 CREB-2|CREB2|TAXREB67|TXREB activating transcription factor 4 protein-coding chr7-129 chr7 130887961 130888193 + 15.7 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -10538 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr2-984 chr2 85754819 85755051 + 15.7 0.000 exon (NM_032827, exon 1 of 3) exon (NM_032827, exon 1 of 3) 944 NM_032827 84913 Hs.135569 NM_032827 ENSG00000168874 ATOH8 HATH6|bHLHa21 atonal bHLH transcription factor 8 protein-coding chr7-710 chr7 46202531 46202763 + 15.7 0.000 Intergenic Intergenic -281375 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr17-412 chr17 50719513 50719745 + 15.7 0.000 promoter-TSS (NM_016424) promoter-TSS (NM_016424) 26 NM_016424 51747 Hs.130293 NM_006107 ENSG00000108848 LUC7L3 CRA|CREAP-1|CROP|LUC7A|OA48-18|hLuc7A LUC7 like 3 pre-mRNA splicing factor protein-coding chr15-400 chr15 58260920 58261152 + 15.7 0.000 Intergenic MER96|DNA|hAT-Tip100 122655 NM_001320635 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding chr1-711 chr1 234478816 234479048 + 15.7 0.000 exon (NM_005646, exon 1 of 30) exon (NM_005646, exon 1 of 30) 247 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr17-812 chr17 57370211 57370443 + 15.7 0.000 intron (NM_001322250, intron 5 of 13) MamRep434|DNA|TcMar-Tigger 113308 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr20-184 chr20 63894081 63894313 + 15.7 0.000 promoter-TSS (NM_025219) promoter-TSS (NM_025219) -929 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chr2-918 chr2 37638034 37638266 + 15.7 0.000 Intergenic Intergenic 34049 NM_001270437 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr16-691 chr16 84919378 84919610 + 15.7 0.000 Intergenic Intergenic 92041 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr1-1371 chr1 65120070 65120302 + 15.7 0.000 Intergenic Intergenic -27363 NM_203464 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr4-516 chr4 8478235 8478467 + 15.7 0.000 Intergenic Intergenic 37554 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr10-490 chr10 104035313 104035545 + 15.7 0.000 intron (NM_000494, intron 49 of 55) intron (NM_000494, intron 49 of 55) 12757 NR_030760 100126326 NR_030760 ENSG00000283788 MIR936 MIRN936|hsa-mir-936 microRNA 936 ncRNA chr12-612 chr12 42327058 42327290 + 15.7 0.000 intron (NM_001364830, intron 1 of 6) intron (NM_001364830, intron 1 of 6) 1007 NM_001143787 51535 Hs.444157 NM_016488 ENSG00000134283 PPHLN1 CR|HSPC206|HSPC232 periphilin 1 protein-coding chr6-199 chr6 22881014 22881246 + 15.7 0.000 Intergenic Intergenic -163206 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr7-781 chr7 99330622 99330854 + 15.7 0.000 intron (NM_006409, intron 1 of 9) intron (NM_006409, intron 1 of 9) 4840 NM_006409 10552 Hs.124126 NM_006409 ENSG00000241685 ARPC1A Arc40|HEL-68|HEL-S-307|SOP2Hs|SOP2L actin related protein 2/3 complex subunit 1A protein-coding chr20-373 chr20 49853471 49853703 + 15.7 0.000 intron (NM_001260491, intron 7 of 15) intron (NM_001260491, intron 7 of 15) -10272 NR_162136 113219455 NR_162136 MIR12122 - microRNA 12122 ncRNA chr22-436 chr22 46798592 46798824 + 15.7 0.000 intron (NM_001284305, intron 4 of 12) L2b|LINE|L2 24781 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr2-186 chr2 127024741 127024973 + 15.7 0.000 Intergenic Intergenic 57208 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr10-379 chr10 60473730 60473962 + 15.7 0.000 intron (NM_001204403, intron 2 of 43) Charlie16a|DNA|hAT-Charlie -83971 NM_020987 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr12-567 chr12 1533223 1533455 + 15.5 0.000 Intergenic Intergenic -1147 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr9-553 chr9 132856407 132856639 + 15.5 0.000 intron (NM_001317959, intron 5 of 14) MLT1K|LTR|ERVL-MaLR -21821 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr15-450 chr15 83604986 83605218 + 15.5 0.000 intron (NM_001324185, intron 9 of 9) intron (NM_001324185, intron 9 of 9) -49021 NM_207517 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding chr1-1156 chr1 154916624 154916856 + 15.5 0.000 Intergenic MSTA|LTR|ERVL-MaLR 19979 NM_001323011 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr13-201 chr13 110307123 110307355 + 15.5 0.000 promoter-TSS (NM_001303110) promoter-TSS (NM_001303110) -45 NM_001846 1284 Hs.508716 NM_001846 ENSG00000134871 COL4A2 BSVD2|ICH|POREN2 collagen type IV alpha 2 chain protein-coding chr1-1386 chr1 79043635 79043867 + 15.5 0.000 Intergenic Intergenic -37021 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr6-254 chr6 158644275 158644507 + 15.5 0.000 intron (NM_001291603, intron 1 of 4) CpG 352 NM_006519 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr1-549 chr1 54312887 54313119 + 15.5 0.000 intron (NM_001009955, intron 4 of 16) intron (NM_001009955, intron 4 of 16) 76560 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr7-431 chr7 93087302 93087534 + 15.5 0.000 Intergenic L1M1|LINE|L1 30561 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding chr2-1113 chr2 212541059 212541291 + 15.5 0.000 Intergenic AluJr4|SINE|Alu -2373 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr15-259 chr15 55907846 55908078 + 15.5 0.000 intron (NM_001329212, intron 5 of 28) intron (NM_001329212, intron 5 of 28) 9169 NM_001284338 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr3-909 chr3 185282870 185283102 + 15.5 0.000 promoter-TSS (NM_001242314) promoter-TSS (NM_001242314) 25 NM_001242317 9175 Hs.591306 NM_004721 ENSG00000073803 MAP3K13 LZK|MEKK13|MLK mitogen-activated protein kinase kinase kinase 13 protein-coding chr2-1017 chr2 114134610 114134842 + 15.5 0.000 Intergenic Intergenic -154742 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr2-762 chr2 28663393 28663625 + 15.5 0.000 Intergenic Intergenic 72696 NR_145832 100505774 Hs.595909 NR_145832 ENSG00000226833 LOC100505774 - uncharacterized LOC100505774 ncRNA chr1-798 chr1 200863691 200863923 + 15.5 0.000 Intergenic Intergenic -9174 NM_005298 2848 Hs.534316 NM_005298 ENSG00000170128 GPR25 - G protein-coupled receptor 25 protein-coding chr1-1060 chr1 245200857 245201089 + 15.5 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) 33544 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr13-73 chr13 37173435 37173667 + 15.5 0.000 Intergenic Intergenic -67887 NM_145203 122011 Hs.512897 NM_145203 ENSG00000180138 CSNK1A1L CK1 casein kinase 1 alpha 1 like protein-coding chr20-367 chr20 44775264 44775496 + 15.5 0.000 intron (NM_001205317, intron 1 of 5) LTR16A2|LTR|ERVL -29153 NR_132377 106144538 Hs.255479 NR_132377 KCNK15-AS1 - KCNK15 and WISP2 antisense RNA 1 ncRNA chr7-358 chr7 40082477 40082709 + 15.5 0.000 intron (NM_003718, intron 11 of 13) AluSz6|SINE|Alu 52029 NM_138701 136647 Hs.654989 NM_138701 ENSG00000168303 MPLKIP ABHS|C7orf11|ORF20|TTD4 M-phase specific PLK1 interacting protein protein-coding chrX-108 chrX 19343687 19343919 + 15.5 0.000 promoter-TSS (NM_001173456) promoter-TSS (NM_001173456) -90 NM_001173454 5160 Hs.530331 NM_000284 ENSG00000131828 PDHA1 PDHA|PDHAD|PDHCE1A|PHE1A pyruvate dehydrogenase E1 alpha 1 subunit protein-coding chr10-640 chr10 33263514 33263746 + 15.5 0.000 intron (NM_001244973, intron 4 of 16) intron (NM_001244973, intron 4 of 16) 71037 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr5-699 chr5 139697261 139697493 + 15.5 0.000 Intergenic CpG 21934 NM_001317209 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr4-517 chr4 8643838 8644070 + 15.5 0.000 Intergenic Intergenic 51189 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding chr14-460 chr14 100032746 100032978 + 15.5 0.000 intron (NM_001330221, intron 1 of 13) intron (NM_001330221, intron 1 of 13) -32560 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr7-638 chr7 1471753 1471985 + 15.5 0.000 intron (NM_001080453, intron 44 of 47) intron (NM_001080453, intron 44 of 47) -12399 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr1-1086 chr1 16218180 16218412 + 15.5 0.000 Intergenic Intergenic -5644 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr9-342 chr9 136157711 136157943 + 15.5 0.000 Intergenic Intergenic -38952 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr4-149 chr4 27435432 27435664 + 15.5 0.000 Intergenic Intergenic 218069 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr7-414 chr7 12687333 12687565 + 15.5 0.000 promoter-TSS (NM_005738) promoter-TSS (NM_005738) 163 NM_001195396 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr7-237 chr7 73899846 73900078 + 15.5 0.000 Intergenic Intergenic 38803 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr3-846 chr3 134407326 134407558 + 15.5 0.000 Intergenic Intergenic -30385 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr2-1023 chr2 120546926 120547158 + 15.5 0.000 Intergenic Intergenic -80693 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr6-484 chr6 2843072 2843304 + 15.5 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -1325 NR_073112 1992 Hs.381167 NM_030666 ENSG00000021355 SERPINB1 EI|ELANH2|HEL-S-27|HEL57|LEI|M/NEI|MNEI|PI-2|PI2 serpin family B member 1 protein-coding chr14-234 chr14 89973316 89973548 + 15.5 0.000 intron (NM_001008744, intron 5 of 15) intron (NM_001008744, intron 5 of 15) 17505 NM_001330205 55775 Hs.209945 NM_018319 ENSG00000042088 TDP1 - tyrosyl-DNA phosphodiesterase 1 protein-coding chr2-925 chr2 40967444 40967676 + 15.5 0.000 Intergenic Intergenic -455125 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr9-445 chr9 100352117 100352349 + 15.5 0.000 intron (NM_017746, intron 1 of 14) intron (NM_017746, intron 1 of 14) 338 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr9-365 chr9 107406974 107407206 + 15.5 0.000 Intergenic Intergenic 59495 NR_121581 101928720 Hs.125496 NR_121581 LINC01509 PRCAT37 long intergenic non-protein coding RNA 1509 ncRNA chr10-660 chr10 48404141 48404373 + 15.5 0.000 intron (NM_001323302, intron 4 of 13) AluSc|SINE|Alu 2645 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr20-223 chr20 38870639 38870871 + 15.5 0.000 intron (NM_015568, intron 2 of 10) intron (NM_015568, intron 2 of 10) -55662 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr14-152 chr14 103732675 103732907 + 15.5 0.000 TTS (NM_015316) TTS (NM_015316) 17047 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr2-1053 chr2 170739154 170739386 + 15.5 0.000 intron (NR_110185, intron 1 of 5) L2b|LINE|L2 23933 NM_001003845 389058 Hs.368802 NM_001003845 ENSG00000204335 SP5 - Sp5 transcription factor protein-coding chr21-138 chr21 33760712 33760944 + 15.5 0.000 intron (NM_001001132, intron 8 of 29) intron (NM_001001132, intron 8 of 29) 118327 NM_001331008 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding chr3-592 chr3 197354345 197354577 + 15.5 0.000 Intergenic Intergenic -55140 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr22-441 chr22 49610531 49610763 + 15.5 0.000 intron (NR_110523, intron 1 of 4) (GTGT)n|Simple_repeat|Simple_repeat 46872 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr10-252 chr10 74113514 74113746 + 15.5 0.000 intron (NM_014000, intron 19 of 21) intron (NM_014000, intron 19 of 21) 37198 NM_207012 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr5-692 chr5 136524647 136524879 + 15.5 0.000 Intergenic Intergenic -159287 NM_001167577 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr7-725 chr7 53764431 53764663 + 15.5 0.000 intron (NR_038371, intron 4 of 5) L1PA11|LINE|L1 47384 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA chr14-476 chr14 103281617 103281849 + 15.5 0.000 Intergenic Intergenic -35551 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr21-68 chr21 43333879 43334111 + 15.5 0.000 Intergenic L2|LINE|L2 -1956 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr15-287 chr15 76529908 76530140 + 15.5 0.000 intron (NR_148227, intron 23 of 32) intron (NR_148227, intron 23 of 32) -56623 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr19-878 chr19 52922888 52923120 + 15.5 0.000 Intergenic CpG -5073 NM_001310127 388559 NM_001310127 ENSG00000213793 ZNF888 - zinc finger protein 888 protein-coding chr8-466 chr8 29314573 29314805 + 15.5 0.000 Intergenic Intergenic 34116 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr2-560 chr2 202035529 202035761 + 15.5 0.000 exon (NM_003507, exon 1 of 1) exon (NM_003507, exon 1 of 1) 1058 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr7-559 chr7 146192911 146193143 + 15.5 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -581244 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr9-463 chr9 126725499 126725731 + 15.5 0.000 Intergenic AluSp|SINE|Alu -79391 NM_001135776 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr21-142 chr21 34807745 34807977 + 15.5 0.000 intron (NM_001001890, intron 4 of 5) intron (NM_001001890, intron 4 of 5) 62036 NR_038885 100506385 Hs.120179 NR_038885 ENSG00000234380 LINC01426 lincRNA-uc002yug.2 long intergenic non-protein coding RNA 1426 ncRNA GL000225.1-18 GL000225.1 38509 38741 + 15.5 0.000 NA NA NA NA chr16-441 chr16 58225414 58225646 + 15.5 0.000 Intergenic Intergenic -24406 NM_001142302 29070 Hs.11614 NM_014157 ENSG00000103021 CCDC113 HSPC065 coiled-coil domain containing 113 protein-coding chr9-331 chr9 132769486 132769718 + 15.5 0.000 intron (NM_001317959, intron 13 of 14) intron (NM_001317959, intron 13 of 14) 99138 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding chr16-707 chr16 87640749 87640981 + 15.5 0.000 intron (NM_020655, intron 1 of 4) intron (NM_020655, intron 1 of 4) 38357 NM_020655 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr1-727 chr1 11838198 11838430 + 15.5 0.000 intron (NM_001286, intron 20 of 22) intron (NM_001286, intron 20 of 22) -2005 NR_037806 100379251 Hs.710015 NR_037806 NPPA-AS1 NPPA-AS|NPPAAS NPPA antisense RNA 1 ncRNA chr18-249 chr18 78013567 78013799 + 15.5 0.000 Intergenic MLT1B|LTR|ERVL-MaLR -19956 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA chr2-679 chr2 158893162 158893394 + 15.5 0.000 Intergenic Intergenic -75356 NM_001145909 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr19-385 chr19 14478014 14478246 + 15.5 0.000 3' UTR (NM_202468, exon 8 of 8) 3' UTR (NM_202468, exon 8 of 8) -2776 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr14-457 chr14 99699535 99699767 + 15.5 0.000 intron (NM_006668, intron 4 of 14) intron (NM_006668, intron 4 of 14) 15353 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr16-685 chr16 83986689 83986921 + 15.5 0.000 intron (NM_019065, intron 5 of 12) AluJb|SINE|Alu 18157 NM_001329749 54550 Hs.140950 NM_019065 ENSG00000103154 NECAB2 EFCBP2|stip-2 N-terminal EF-hand calcium binding protein 2 protein-coding chr15-461 chr15 89572120 89572352 + 15.5 0.000 Intergenic L2b|LINE|L2 -3233 NM_152259 90381 Hs.441708 NM_152259 ENSG00000140534 TICRR C15orf42|SLD3|Treslin TOPBP1 interacting checkpoint and replication regulator protein-coding chr3-852 chr3 140085613 140085845 + 15.5 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 150544 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr2-1046 chr2 152859721 152859953 + 15.5 0.000 Intergenic (CTGAAC)n|Simple_repeat|Simple_repeat 141200 NR_146429 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr4-612 chr4 119570549 119570781 + 15.5 0.000 intron (NM_033437, intron 3 of 20) intron (NM_033437, intron 3 of 20) 57072 NM_033430 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr1-628 chr1 36343109 36343341 + 15.5 0.000 intron (NM_001282546, intron 10 of 10) intron (NM_001282546, intron 10 of 10) -19071 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr1-933 chr1 65247852 65248084 + 15.5 0.000 Intergenic Intergenic -16726 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr18-195 chr18 21979967 21980199 + 15.5 0.000 Intergenic AluJr|SINE|Alu -148677 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA chr16-366 chr16 58298140 58298372 + 15.5 0.000 Intergenic FLAM_C|SINE|Alu -3209 NM_001080492 221191 Hs.411239 NM_001080492 ENSG00000103023 PRSS54 CT67|KLKBL4 serine protease 54 protein-coding chr2-388 chr2 65435738 65435970 + 15.5 0.000 Intergenic CpG -3255 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr19-464 chr19 4916095 4916327 + 15.5 0.000 intron (NM_001290051, intron 2 of 16) AluJr|SINE|Alu 5844 NM_001290052 29128 Hs.108106 NM_013282 ENSG00000276043 UHRF1 ICBP90|Np95|RNF106|TDRD22|hNP95|hUHRF1|huNp95 ubiquitin like with PHD and ring finger domains 1 protein-coding chr2-985 chr2 94954979 94955211 + 15.5 0.000 Intergenic L1MCb|LINE|L1 -7753 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA chr1-981 chr1 155598975 155599207 + 15.5 0.000 Intergenic AluJb|SINE|Alu -11079 NM_001350781 55154 Hs.656547 NM_018116 ENSG00000125459 MSTO1 LST005|MMYAT|MST misato mitochondrial distribution and morphology regulator 1 protein-coding chr10-559 chr10 77357488 77357720 + 15.5 0.000 intron (NR_126365, intron 3 of 5) MER121B|DNA|hAT? 6732 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA chr9-503 chr9 137315635 137315867 + 15.5 0.000 intron (NM_017820, intron 19 of 21) intron (NM_017820, intron 19 of 21) -13480 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr12-474 chr12 122145615 122145847 + 15.5 0.000 3' UTR (NM_014938, exon 17 of 17).2 3' UTR (NM_014938, exon 17 of 17).2 -21988 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr12-614 chr12 43408100 43408332 + 15.5 0.000 intron (NM_025003, intron 28 of 38) intron (NM_025003, intron 28 of 38) 143987 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding chr5-470 chr5 170383693 170383925 + 15.5 0.000 exon (NM_004137, exon 3 of 4) exon (NM_004137, exon 3 of 4) 5558 NM_004137 3779 Hs.484099 NM_004137 ENSG00000145936 KCNMB1 BKbeta1|K(VCA)beta|SLO-BETA|hbeta1|hslo-beta|k(VCA)beta-1|slo-beta-1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 protein-coding chr11-664 chr11 397290 397522 + 15.5 0.000 exon (NM_007183, exon 3 of 13) exon (NM_007183, exon 3 of 13) 3197 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr11-336 chr11 6319819 6320051 + 15.5 0.000 intron (NM_145040, intron 1 of 1) intron (NM_145040, intron 1 of 1) 566 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr15-446 chr15 78438163 78438395 + 15.5 0.000 promoter-TSS (NM_001320941) promoter-TSS (NM_001320941) 63 NM_001320941 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr2-1118 chr2 216222825 216223057 + 15.5 0.000 Intergenic Intergenic 6052 NR_037701 150967 Hs.56876 NM_001199924 ENSG00000260804 LINC01963 PKI55 long intergenic non-protein coding RNA 1963 ncRNA KI270772.1-1 KI270772.1 42588 42820 + 15.5 0.000 NA NA NA NA chr11-621 chr11 73221774 73222006 + 15.5 0.000 intron (NM_176071, intron 1 of 2) intron (NM_176071, intron 1 of 2) 3328 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr8-278 chr8 143269828 143270060 + 15.5 0.000 intron (NM_138465, intron 2 of 3) intron (NM_138465, intron 2 of 3) 2499 NM_138465 2738 Hs.400533 NM_138465 ENSG00000250571 GLI4 HKR4|ZNF928 GLI family zinc finger 4 protein-coding chr1-723 chr1 2358259 2358491 + 15.5 0.000 intron (NM_001301060, intron 9 of 10) intron (NM_001301060, intron 9 of 10) -5714 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr13-302 chr13 53142582 53142814 + 15.3 0.000 intron (NR_125788, intron 4 of 4) L2c|LINE|L2 9202 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA chr21-137 chr21 32521427 32521659 + 15.3 0.000 Intergenic Intergenic 63980 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr1-754 chr1 46453077 46453309 + 15.3 0.000 Intergenic Intergenic -3489 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr21-100 chr21 44314624 44314856 + 15.3 0.000 intron (NM_001002021, intron 10 of 24) intron (NM_001002021, intron 10 of 24) 14687 NM_002626 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr11-950 chr11 111819855 111820087 + 15.3 0.000 intron (NR_147984, intron 13 of 15) intron (NR_147984, intron 13 of 15) 51310 NM_001352415 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr2-775 chr2 62485762 62485994 + 15.3 0.000 Intergenic Intergenic 20317 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2-1003 chr2 105135791 105136023 + 15.3 0.000 Intergenic LTR33|LTR|ERVL -8206 NR_136172 105373984 Hs.570237 NR_136172 ENSG00000226508 LINC01918 - long intergenic non-protein coding RNA 1918 ncRNA chr1-1590 chr1 225908411 225908643 + 15.3 0.000 Intergenic Intergenic 13615 NR_106799 102466270 NR_106799 ENSG00000284519 MIR6741 hsa-mir-6741 microRNA 6741 ncRNA chr10-735 chr10 90179846 90180078 + 15.3 0.000 Intergenic Intergenic -222589 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA chr19-832 chr19 38304649 38304881 + 15.3 0.000 3' UTR (NM_001039673, exon 8 of 8) 3' UTR (NM_001039673, exon 8 of 8) 514 NM_033520 64073 Hs.631544 NM_022125 ENSG00000167644 C19orf33 H2RSP|IMUP|IMUP-1|IMUP-2 chromosome 19 open reading frame 33 protein-coding chrX-286 chrX 137224765 137224997 + 15.3 0.000 Intergenic L2b|LINE|L2 -193207 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr12-687 chr12 94305721 94305953 + 15.3 0.000 TTS (NM_001346457) TTS (NM_001346457) 43316 NR_037687 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding chr1-266 chr1 16960867 16961099 + 15.3 0.000 exon (NM_014675, exon 27 of 37) exon (NM_014675, exon 27 of 37) 19637 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr1-760 chr1 62122291 62122523 + 15.3 0.000 intron (NM_001350145, intron 38 of 43) intron (NM_001350145, intron 38 of 43) -43551 NR_036059 100422946 NR_036059 ENSG00000283690 MIR3116-2 - microRNA 3116-2 ncRNA chr7-436 chr7 101705503 101705735 + 15.3 0.000 Intergenic L1MC4a|LINE|L1 -76323 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr7-798 chr7 103638173 103638405 + 15.3 0.000 intron (NM_005045, intron 17 of 64) intron (NM_005045, intron 17 of 64) -192082 NR_135802 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr5-507 chr5 84384368 84384600 + 15.3 0.000 5' UTR (NM_005711, exon 1 of 11) 5' UTR (NM_005711, exon 1 of 11) 383 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr16-478 chr16 89187770 89188002 + 15.3 0.000 intron (NM_004933, intron 6 of 13) intron (NM_004933, intron 6 of 13) 12651 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr4-650 chr4 150782922 150783154 + 15.3 0.000 intron (NM_001367550, intron 34 of 56) intron (NM_001367550, intron 34 of 56) 200887 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr11-794 chr11 15795597 15795829 + 15.3 0.000 Intergenic Intergenic 151828 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr2-669 chr2 143171861 143172093 + 15.3 0.000 intron (NM_018460, intron 2 of 13) MLT1J|LTR|ERVL-MaLR 42558 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr2-750 chr2 3098573 3098805 + 15.3 0.000 intron (NR_110228, intron 3 of 6) intron (NR_110228, intron 3 of 6) 27337 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-897 chr1 38643534 38643766 + 15.3 0.000 Intergenic MER112|DNA|hAT-Charlie 168454 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chrX-123 chrX 65643281 65643513 + 15.3 0.000 Intergenic Intergenic -24257 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr7-862 chr7 150328803 150329035 + 15.3 0.000 promoter-TSS (NM_138434) promoter-TSS (NM_138434) -930 NM_138434 113763 Hs.655915 NM_138434 ENSG00000188707 ZBED6CL C7orf29 ZBED6 C-terminal like protein-coding chr11-927 chr11 86068054 86068286 + 15.3 0.000 intron (NM_001206947, intron 1 of 18) intron (NM_001206947, intron 1 of 18) 914 NM_001206946 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr7-545 chr7 134743365 134743597 + 15.3 0.000 Intergenic Intergenic -36153 NM_033138 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr10-415 chr10 2236768 2237000 + 15.3 0.000 Intergenic Intergenic 78190 NR_038884 399708 Hs.521270 NR_038884 LINC00701 - long intergenic non-protein coding RNA 701 ncRNA chr12-289 chr12 48998966 48999198 + 15.3 0.000 exon (NM_015086, exon 1 of 2) exon (NM_015086, exon 1 of 2) 293 NM_015086 23109 Hs.591044 NM_015086 ENSG00000181418 DDN - dendrin protein-coding chr5-466 chr5 168486416 168486648 + 15.3 0.000 promoter-TSS (NM_002887) promoter-TSS (NM_002887) 61 NM_002887 5917 Hs.654907 NM_002887 ENSG00000113643 RARS ArgRS|DALRD1|HLD9 arginyl-tRNA synthetase protein-coding chr1-1492 chr1 165914238 165914470 + 15.3 0.000 Intergenic Intergenic 6433 NR_037431 100500832 NR_037431 ENSG00000283936 MIR3658 - microRNA 3658 ncRNA chr1-1511 chr1 180151243 180151475 + 15.3 0.000 Intergenic LTR33|LTR|ERVL -3474 NM_001004128 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr1-1041 chr1 225182915 225183147 + 15.3 0.000 intron (NM_001367479, intron 36 of 85) L1M1|LINE|L1 245007 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr7-868 chr7 151454419 151454651 + 15.3 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR -13722 NR_131779 155051 Hs.647104 NM_144727 ENSG00000127377 CRYGN - crystallin gamma N protein-coding chr10-645 chr10 34798699 34798931 + 15.3 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 16481 NM_001184794 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr15-280 chr15 71275103 71275335 + 15.3 0.000 intron (NM_024817, intron 5 of 16) intron (NM_024817, intron 5 of 16) -86160 NR_120349 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr5-559 chr5 5613803 5614035 + 15.3 0.000 Intergenic LTR16A|LTR|ERVL 191242 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding chr3-529 chr3 113746246 113746478 + 15.3 0.000 promoter-TSS (NM_001308445) promoter-TSS (NM_001308445) -113 NM_001308445 80218 Hs.372378 NM_025146 ENSG00000121579 NAA50 MAK3|NAT13|NAT13P|NAT5|NAT5P|SAN|hNaa50p N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding chr4-617 chr4 123558430 123558662 + 15.3 0.000 Intergenic AluJo|SINE|Alu -91445 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr2-819 chr2 158967825 158968057 + 15.3 0.000 promoter-TSS (NR_146421) promoter-TSS (NR_146421) -693 NM_001145909 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr16-358 chr16 30787282 30787514 + 15.3 0.000 promoter-TSS (NM_001345970) promoter-TSS (NM_001345970) -193 NM_001080417 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr12-728 chr12 120159656 120159888 + 15.3 0.000 intron (NM_006836, intron 24 of 57) intron (NM_006836, intron 24 of 57) -4273 NR_039719 100616179 NR_039719 ENSG00000266704 MIR4498 mir-4498 microRNA 4498 ncRNA chrX-191 chrX 133340061 133340293 + 15.3 0.000 intron (NM_001448, intron 1 of 8) intron (NM_001448, intron 1 of 8) 75312 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr6-458 chr6 124772312 124772544 + 15.3 0.000 intron (NM_001040214, intron 4 of 6) L2c|LINE|L2 -190117 NR_136734 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding chr8-171 chr8 125388483 125388715 + 15.3 0.000 Intergenic Intergenic -41759 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr21-95 chr21 39676579 39676811 + 15.3 0.000 Intergenic Intergenic 19362 NM_033171 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr11-673 chr11 11027403 11027635 + 15.3 0.000 Intergenic Intergenic 169302 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr4-649 chr4 150385816 150386048 + 15.3 0.000 intron (NM_001367550, intron 47 of 56) intron (NM_001367550, intron 47 of 56) -193157 NR_149035 729558 Hs.647978 NR_149035 ENSG00000249690 LOC729558 - uncharacterized LOC729558 ncRNA chr1-1312 chr1 30601669 30601901 + 15.3 0.000 Intergenic Intergenic -116987 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr4-657 chr4 158301115 158301347 + 15.3 0.000 Intergenic Intergenic 90745 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr19-568 chr19 3908328 3908560 + 15.3 0.000 intron (NM_033064, intron 6 of 12) intron (NM_033064, intron 6 of 12) -24659 NM_170678 27231 Hs.135458 NM_014446 ENSG00000077009 NMRK2 ITGB1BP3|MIBP|NRK2 nicotinamide riboside kinase 2 protein-coding chr20-399 chr20 63490461 63490693 + 15.3 0.000 exon (NM_001958, exon 6 of 8) exon (NM_001958, exon 6 of 8) 8506 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr10-673 chr10 63115760 63115992 + 15.3 0.000 Intergenic Intergenic -17371 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr8-377 chr8 19095984 19096216 + 15.3 0.000 Intergenic Intergenic -82397 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr17-855 chr17 78366248 78366480 + 15.3 0.000 intron (NR_110847, intron 2 of 4) intron (NR_110847, intron 2 of 4) 5362 NR_110846 101928674 Hs.637297 NR_110845 ENSG00000266970 LOC101928674 - uncharacterized LOC101928674 ncRNA chr17-182 chr17 56833911 56834143 + 15.3 0.000 promoter-TSS (NM_003647) promoter-TSS (NM_003647) -107 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr7-473 chr7 38082522 38082754 + 15.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR -95607 NM_032016 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr7-822 chr7 128087685 128087917 + 15.3 0.000 intron (NM_014390, intron 21 of 23) intron (NM_014390, intron 21 of 23) 5940 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr1-1329 chr1 38098000 38098232 + 15.3 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 8885 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr10-190 chr10 70382677 70382909 + 15.3 0.000 promoter-TSS (NM_001278214) promoter-TSS (NM_001278214) -143 NM_001278214 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr2-1102 chr2 203239733 203239965 + 15.3 0.000 intron (NM_177538, intron 1 of 12) intron (NM_177538, intron 1 of 12) 1408 NM_177538 57404 Hs.446065 NM_020674 ENSG00000119004 CYP20A1 CYP-M cytochrome P450 family 20 subfamily A member 1 protein-coding chr12-371 chr12 121101492 121101724 + 15.3 0.000 Intergenic L1MA4|LINE|L1 -31268 NR_033951 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr22-421 chr22 44290398 44290630 + 15.3 0.000 intron (NM_001099294, intron 3 of 4) AluSp|SINE|Alu 22437 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr2-668 chr2 142112985 142113217 + 15.3 0.000 intron (NM_018557, intron 1 of 90) MIRc|SINE|MIR 18600 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr13-209 chr13 20146924 20147156 + 15.3 0.000 intron (NM_021954, intron 1 of 1) MLT1L|LTR|ERVL-MaLR 14012 NM_021954 2700 Hs.130313 NM_021954 ENSG00000121743 GJA3 CTRCT14|CX46|CZP3 gap junction protein alpha 3 protein-coding chr8-426 chr8 142739343 142739575 + 15.3 0.000 Intergenic CpG 2947 NM_020427 57152 Hs.103505 NM_020427 ENSG00000126233 SLURP1 ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM secreted LY6/PLAUR domain containing 1 protein-coding chr10-668 chr10 60611495 60611727 + 15.3 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -38655 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr5-474 chr5 173029756 173029988 + 15.3 0.000 intron (NM_003945, intron 3 of 3) intron (NM_003945, intron 3 of 3) 9146 NR_002988 677841 Hs.692720 NR_002988 ENSG00000212402 SNORA74B U19-2 small nucleolar RNA, H/ACA box 74B snoRNA chr13-247 chr13 21026309 21026541 + 15.3 0.000 intron (NM_014572, intron 2 of 7) L1ME1|LINE|L1 35161 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr4-572 chr4 76872559 76872791 + 15.3 0.000 Intergenic MER5A|DNA|hAT-Charlie 25469 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr12-280 chr12 8032793 8033025 + 15.3 0.000 5' UTR (NM_018416, exon 1 of 11) 5' UTR (NM_018416, exon 1 of 11) 193 NM_018416 55810 Hs.120844 NM_018416 ENSG00000065970 FOXJ2 FHX forkhead box J2 protein-coding chr10-808 chr10 123889720 123889952 + 15.3 0.000 intron (NM_198148, intron 1 of 13) intron (NM_198148, intron 1 of 13) 1971 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr10-820 chr10 126119623 126119855 + 15.3 0.000 intron (NM_001288974, intron 5 of 18) intron (NM_001288974, intron 5 of 18) -146466 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr22-439 chr22 48146911 48147143 + 15.3 0.000 Intergenic Intergenic -127337 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA chr9-383 chr9 133582227 133582459 + 15.3 0.000 Intergenic L1MC5a|LINE|L1 -2097 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr15-307 chr15 26087946 26088178 + 15.3 0.000 Intergenic MER57B1|LTR|ERV1 -27751 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr1-1180 chr1 203513542 203513774 + 15.3 0.000 Intergenic Intergenic 19505 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr13-251 chr13 22218749 22218981 + 15.3 0.000 intron (NR_103810, intron 1 of 1) intron (NR_103810, intron 1 of 1) 8580 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA chr1-1530 chr1 200372159 200372391 + 15.3 0.000 intron (NR_040064, intron 2 of 4) intron (NR_040064, intron 2 of 4) 1517 NR_040064 554279 Hs.434694 NR_040064 ENSG00000203721 LINC00862 C1orf98|SMIM16 long intergenic non-protein coding RNA 862 ncRNA chr22-295 chr22 38843245 38843477 + 15.3 0.000 exon (NM_014293, exon 1 of 5) exon (NM_014293, exon 1 of 5) 667 NM_014293 23467 Hs.91622 NM_014293 ENSG00000221890 NPTXR NPR neuronal pentraxin receptor protein-coding chr12-720 chr12 115292876 115293108 + 15.3 0.000 Intergenic L1MA8|LINE|L1 -608817 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr17-626 chr17 16199378 16199610 + 15.3 0.000 intron (NM_006311, intron 1 of 45) intron (NM_006311, intron 1 of 45) -4855 NM_001190438 9611 Hs.462323 NM_006311 ENSG00000141027 NCOR1 N-CoR|N-CoR1|PPP1R109|TRAC1|hN-CoR nuclear receptor corepressor 1 protein-coding chrX-241 chrX 55182247 55182479 + 15.3 0.000 promoter-TSS (NM_001190708) promoter-TSS (NM_001190708) 79 NM_001190708 100463488 NM_001190708 ENSG00000256045 MTRNR2L10 HN10 MT-RNR2 like 10 protein-coding chr9-620 chr9 90102201 90102433 + 15.3 0.000 Intergenic Intergenic -60818 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA chr4-291 chr4 33157192 33157424 + 15.3 0.000 Intergenic L1MA1|LINE|L1 806270 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr5-684 chr5 134140732 134140964 + 15.3 0.000 exon (NM_001346425, exon 6 of 11) exon (NM_001346425, exon 6 of 11) 17230 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr5-432 chr5 126539124 126539356 + 15.3 0.000 Intergenic Intergenic 55979 NM_001201377 501 Hs.483239 NM_001182 ENSG00000164904 ALDH7A1 ATQ1|EPD|PDE aldehyde dehydrogenase 7 family member A1 protein-coding chr7-707 chr7 44469899 44470131 + 15.3 0.000 intron (NM_015332, intron 2 of 5) L1MC4|LINE|L1 20643 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr16-681 chr16 82694281 82694513 + 15.3 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 5466 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA chr1-651 chr1 77888369 77888601 + 15.3 0.000 promoter-TSS (NM_144573) promoter-TSS (NM_144573) -30 NM_001172309 91624 Hs.612385 NM_144573 ENSG00000162614 NEXN CMH20|NELIN nexilin F-actin binding protein protein-coding chr12-317 chr12 112419185 112419417 + 15.3 0.000 promoter-TSS (NM_001320141) promoter-TSS (NM_001320141) 354 NM_080601 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chr19-663 chr19 1674653 1674885 + 15.3 0.000 Intergenic Intergenic -22154 NM_001351779 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr12-677 chr12 85280397 85280629 + 15.3 0.000 intron (NM_006982, intron 1 of 3) CpG 293 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr19-455 chr19 405180 405412 + 15.3 0.000 TTS (NM_001136263) TTS (NM_001136263) 3851 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr10-763 chr10 101728305 101728537 + 15.3 0.000 Intergenic L2a|LINE|L2 -33126 NM_001323541 6468 Hs.500822 NM_022039 ENSG00000107829 FBXW4 DAC|FBW4|FBWD4|SHFM3|SHSF3 F-box and WD repeat domain containing 4 protein-coding chr1-1219 chr1 3627233 3627465 + 15.1 0.000 intron (NM_182752, intron 3 of 4) intron (NM_182752, intron 3 of 4) 2334 NM_182752 127262 Hs.20529 NM_182752 ENSG00000158109 TPRG1L FAM79A|h-mover|mover tumor protein p63 regulated 1 like protein-coding chr5-447 chr5 145650376 145650608 + 15.1 0.000 Intergenic Intergenic 184850 NM_138492 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr3-751 chr3 45644822 45645054 + 15.1 0.000 intron (NM_014240, intron 2 of 7) intron (NM_014240, intron 2 of 7) 43944 NR_033947 644714 Hs.712889 NR_033947 LIMD1-AS1 - LIMD1 antisense RNA 1 ncRNA chr11-814 chr11 39232413 39232645 + 15.1 0.000 Intergenic L1PA8|LINE|L1 583671 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr1-857 chr1 19454863 19455095 + 15.1 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 29316 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr21-117 chr21 44801062 44801294 + 15.1 0.000 intron (NM_003343, intron 1 of 5) intron (NM_003343, intron 1 of 5) 642 NM_001202489 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr4-235 chr4 6560590 6560822 + 15.1 0.000 intron (NM_001206994, intron 1 of 9) MER45C|DNA|hAT-Tip100 3093 NM_001206994 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr1-835 chr1 7314117 7314349 + 15.1 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 75521 NR_146200 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr1-120 chr1 15825899 15826131 + 15.1 0.000 Intergenic L2-3_Crp|LINE|L2 -18316 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr17-815 chr17 58634345 58634577 + 15.1 0.000 intron (NM_031272, intron 2 of 31) intron (NM_031272, intron 2 of 31) 57594 NM_198393 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr11-633 chr11 95045318 95045550 + 15.1 0.000 Intergenic LTR16A|LTR|ERVL 20176 NM_001161630 390245 Hs.714692 NM_001161630 ENSG00000235268 KDM4E JMJD2E|KDM4DL|KDM5E lysine demethylase 4E protein-coding chr16-361 chr16 56356414 56356646 + 15.1 0.000 3' UTR (NM_020988, exon 9 of 9) 3' UTR (NM_020988, exon 9 of 9) 68459 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr15-413 chr15 66614891 66615123 + 15.1 0.000 intron (NR_110372, intron 1 of 4) intron (NR_110372, intron 1 of 4) 32817 NR_110372 102723165 Hs.636703 NR_110372 ENSG00000259471 LINC01169 - long intergenic non-protein coding RNA 1169 ncRNA chr16-573 chr16 4668506 4668738 + 15.1 0.000 intron (NM_001142290, intron 8 of 16) intron (NM_001142290, intron 8 of 16) -2696 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr9-609 chr9 68908176 68908408 + 15.1 0.000 intron (NM_003558, intron 8 of 15) intron (NM_003558, intron 8 of 15) 67549 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA chr1-1405 chr1 91781350 91781582 + 15.1 0.000 intron (NR_036634, intron 4 of 17) intron (NR_036634, intron 4 of 17) 104685 NM_001195683 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr2-1045 chr2 150663332 150663564 + 15.1 0.000 Intergenic Intergenic 34551 NR_110246 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr10-628 chr10 27625021 27625253 + 15.1 0.000 Intergenic Intergenic -119478 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA chr13-257 chr13 27257458 27257690 + 15.1 0.000 Intergenic L1MD1|LINE|L1 2173 NR_002575 619499 Hs.689719 NR_002575 ENSG00000207051 SNORA27 ACA27 small nucleolar RNA, H/ACA box 27 snoRNA chr5-205 chr5 68434199 68434431 + 15.1 0.000 Intergenic Intergenic 141738 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr16-277 chr16 59041324 59041556 + 15.1 0.000 Intergenic Intergenic -307124 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chrX-270 chrX 119630623 119630855 + 15.1 0.000 intron (NM_145799, intron 8 of 10) AluSg|SINE|Alu 16109 NR_030413 768218 NR_030413 ENSG00000211578 MIR766 MIRN766|hsa-mir-766|mir-766 microRNA 766 ncRNA chr5-726 chr5 157689017 157689249 + 15.1 0.000 Intergenic AluSc5|SINE|Alu 17600 NM_001145132 100190949 Hs.720862 NM_001145132 ENSG00000187658 C5orf52 - chromosome 5 open reading frame 52 protein-coding chr19-470 chr19 12757589 12757821 + 15.1 0.000 exon (NM_017682, exon 10 of 10) exon (NM_017682, exon 10 of 10) 5914 NM_017682 54831 Hs.435611 NM_017682 ENSG00000039987 BEST2 VMD2L1 bestrophin 2 protein-coding chr17-676 chr17 76453194 76453426 + 15.1 0.000 promoter-TSS (NM_001166579) promoter-TSS (NM_001166579) -41 NM_001166579 15 Hs.431417 NM_001088 ENSG00000129673 AANAT DSPS|SNAT aralkylamine N-acetyltransferase protein-coding chr8-490 chr8 42740338 42740570 + 15.1 0.000 Intergenic LTR24B|LTR|ERV1 28332 NM_001199279 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr8-363 chr8 141522410 141522642 + 15.1 0.000 Intergenic MIRb|SINE|MIR -15296 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr2-1121 chr2 217367383 217367615 + 15.1 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 84766 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr18-101 chr18 27723104 27723336 + 15.1 0.000 Intergenic Intergenic 313421 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr9-262 chr9 128058866 128059098 + 15.1 0.000 Intergenic AluSz6|SINE|Alu 8338 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr10-604 chr10 7412871 7413103 + 15.1 0.000 Intergenic CpG-2640 -1501 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr4-447 chr4 88283726 88283958 + 15.1 0.000 intron (NM_152542, intron 1 of 6) CpG 719 NM_152542 152926 Hs.43744 NM_152542 ENSG00000163644 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent 1K protein-coding chr2-1009 chr2 109097536 109097768 + 15.1 0.000 Intergenic L1MEg|LINE|L1 -31553 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding chr15-401 chr15 58424010 58424242 + 15.1 0.000 Intergenic Intergenic -7865 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding chr19-742 chr19 1259274 1259506 + 15.1 0.000 TTS (NM_177401) TTS (NM_177401) -9878 NM_001280 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr16-385 chr16 89964451 89964683 + 15.1 0.000 exon (NM_001242819, exon 11 of 12) exon (NM_001242819, exon 11 of 12) -8013 NR_003226 172 Hs.534773 NM_001132 ENSG00000223959 AFG3L1P AFG3|AFG3L1 AFG3 like matrix AAA peptidase subunit 1, pseudogene pseudo chr13-268 chr13 38439391 38439623 + 15.1 0.000 Intergenic L2a|LINE|L2 89656 NR_104585 51569 Hs.643655 NM_016617 ENSG00000120686 UFM1 BM-002|C13orf20|HLD14 ubiquitin fold modifier 1 protein-coding chr1-833 chr1 6446436 6446668 + 15.1 0.000 intron (NM_031475, intron 7 of 12) intron (NM_031475, intron 7 of 12) -16656 NR_036218 100422975 NR_036218 ENSG00000265392 MIR4252 - microRNA 4252 ncRNA chr6-465 chr6 143977217 143977449 + 15.1 0.000 intron (NM_001289044, intron 1 of 5) L1MC1|LINE|L1 -11855 NM_001317158 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr14-332 chr14 105191177 105191409 + 15.1 0.000 Intergenic Intergenic -9970 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr1-753 chr1 46179161 46179393 + 15.1 0.000 intron (NM_005727, intron 1 of 8) AluJo|SINE|Alu -2789 NM_001303427 110117499 Hs.655387 NM_001303427 ENSG00000278139 LOC110117498-PIK3R3 - LOC110117498-PIK3R3 readthrough protein-coding chr8-399 chr8 69369966 69370198 + 15.1 0.000 Intergenic Intergenic 78162 NR_110433 100505739 Hs.127115 NR_110433 LINC01603 - long intergenic non-protein coding RNA 1603 ncRNA chr7-622 chr7 148649777 148650009 + 15.1 0.000 Intergenic AluJr|SINE|Alu -47863 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr17-623 chr17 14052995 14053227 + 15.1 0.000 intron (NR_049718, intron 1 of 2) intron (NR_049718, intron 1 of 2) 16347 NR_049718 100874058 Hs.720411 NR_049718 ENSG00000236088 COX10-AS1 COX10-AS|COX10AS COX10 antisense RNA 1 ncRNA chr19-667 chr19 3428521 3428753 + 15.1 0.000 intron (NM_001245002, intron 3 of 10) intron (NM_001245002, intron 3 of 10) 51888 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr1-689 chr1 201399115 201399347 + 15.1 0.000 promoter-TSS (NM_005558) promoter-TSS (NM_005558) 93 NM_005558 3898 Hs.519035 NM_005558 ENSG00000159166 LAD1 LadA ladinin 1 protein-coding chr11-820 chr11 45480097 45480329 + 15.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 108816 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr17-618 chr17 7705533 7705765 + 15.1 0.000 exon (NM_001406, exon 1 of 5) exon (NM_001406, exon 1 of 5) 447 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr19-764 chr19 5018241 5018473 + 15.1 0.000 intron (NM_001370094, intron 2 of 10) intron (NM_001370094, intron 2 of 10) 49244 NM_001370093 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr13-143 chr13 43882296 43882528 + 15.1 0.000 intron (NM_001350648, intron 3 of 5) intron (NM_001350648, intron 3 of 5) 2508 NM_001350642 144811 Hs.210586 NM_153218 ENSG00000179630 LACC1 C13orf31|FAMIN laccase domain containing 1 protein-coding chr17-644 chr17 39756877 39757109 + 15.1 0.000 TTS (NM_183230) TTS (NM_183230) 17026 NM_001242443 2886 Hs.86859 NM_005310 ENSG00000141738 GRB7 - growth factor receptor bound protein 7 protein-coding chr9-544 chr9 127803239 127803471 + 15.1 0.000 5' UTR (NM_001018078, exon 1 of 15) 5' UTR (NM_001018078, exon 1 of 15) 174 NM_001018078 2356 Hs.335084 NM_004957 ENSG00000136877 FPGS - folylpolyglutamate synthase protein-coding chr17-299 chr17 15262687 15262919 + 15.1 0.000 promoter-TSS (NM_001281455) promoter-TSS (NM_001281455) -214 NM_001281455 5376 Hs.372031 NM_000304 ENSG00000109099 PMP22 CIDP|CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110 peripheral myelin protein 22 protein-coding chr5-704 chr5 141861724 141861956 + 15.1 0.000 TTS (NM_001278615) TTS (NM_001278615) 4362 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr17-865 chr17 79933249 79933481 + 15.1 0.000 3' UTR (NM_019020, exon 12 of 12) 3' UTR (NM_019020, exon 12 of 12) -6640 NR_110850 101928766 Hs.630666 NR_110850 ENSG00000262585 LINC01979 - long intergenic non-protein coding RNA 1979 ncRNA chr15-390 chr15 51829662 51829894 + 15.1 0.000 5' UTR (NM_014547, exon 1 of 10) 5' UTR (NM_014547, exon 1 of 10) 125 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr20-194 chr20 15426379 15426611 + 15.1 0.000 intron (NM_001351663, intron 6 of 17) AluJb|SINE|Alu 229655 NM_001351664 140733 Hs.661576 NM_080676 ENSG00000172264 MACROD2 C20orf133|C2orf133 mono-ADP ribosylhydrolase 2 protein-coding chr16-453 chr16 68590509 68590741 + 15.1 0.000 Intergenic Intergenic 51334 NM_001305206 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr11-938 chr11 96932933 96933165 + 15.1 0.000 Intergenic Intergenic 424624 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr11-482 chr11 126132347 126132579 + 15.1 0.000 Intergenic Intergenic -69171 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr6-215 chr6 52511767 52511999 + 15.1 0.000 intron (NM_012288, intron 4 of 10) intron (NM_012288, intron 4 of 10) 65177 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr10-518 chr10 133322921 133323153 + 15.1 0.000 Intergenic AluJr|SINE|Alu -10700 NR_046330 10844 Hs.523370 NM_006659 ENSG00000130640 TUBGCP2 ALP4|GCP-2|GCP2|Grip103|SPBC97|SPC97|Spc97p|h103p|hGCP2|hSpc97 tubulin gamma complex associated protein 2 protein-coding chr1-1616 chr1 245298781 245299013 + 15.1 0.000 intron (NM_018012, intron 2 of 14) intron (NM_018012, intron 2 of 14) -64380 NR_151721 111216275 Hs.663694 NR_151721 ENSG00000232192 KIF26B-AS1 - KIF26B antisense RNA 1 ncRNA chr16-533 chr16 85509995 85510227 + 15.1 0.000 Intergenic Intergenic -101298 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr2-973 chr2 74133460 74133692 + 15.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 14336 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chr9-715 chr9 133524498 133524730 + 15.1 0.000 intron (NM_001080483, intron 1 of 4) intron (NM_001080483, intron 1 of 4) 345 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding chr2-845 chr2 207768655 207768887 + 15.1 0.000 5' UTR (NM_003468, exon 2 of 2) 5' UTR (NM_003468, exon 2 of 2) 1135 NM_003468 7855 Hs.17631 NM_003468 ENSG00000163251 FZD5 C2orf31|HFZ5 frizzled class receptor 5 protein-coding chr12-626 chr12 49784144 49784376 + 15.1 0.000 Intergenic L2|LINE|L2 42451 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr7-640 chr7 1694040 1694272 + 15.1 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 6037 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr11-520 chr11 75563921 75564153 + 15.1 0.000 intron (NM_001207014, intron 2 of 5) intron (NM_001207014, intron 2 of 5) 1784 NM_001207014 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr2-825 chr2 177242495 177242727 + 15.1 0.000 intron (NM_001313903, intron 1 of 4) intron (NM_001313903, intron 1 of 4) 13399 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr16-477 chr16 88700149 88700381 + 15.1 0.000 intron (NM_178841, intron 2 of 5) intron (NM_178841, intron 2 of 5) 3316 NM_001171816 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr5-562 chr5 7597311 7597543 + 15.1 0.000 intron (NM_020546, intron 3 of 24) intron (NM_020546, intron 3 of 24) 201289 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding chr3-923 chr3 194135971 194136203 + 15.1 0.000 promoter-TSS (NM_005524) promoter-TSS (NM_005524) -61 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr14-466 chr14 101758410 101758642 + 15.1 0.000 Intergenic Intergenic -2047 NM_001352914 5527 Hs.368264 NM_002719 ENSG00000078304 PPP2R5C B56G|B56gamma|PR61G protein phosphatase 2 regulatory subunit B'gamma protein-coding chr18-189 chr18 9952567 9952799 + 15.1 0.000 intron (NM_194434, intron 5 of 5) intron (NM_194434, intron 5 of 5) 38667 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr3-672 chr3 169476366 169476598 + 15.1 0.000 intron (NR_134932, intron 4 of 4) intron (NR_134932, intron 4 of 4) 28615 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr20-16 chr20 31063016 31063248 + 15.1 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -194532 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr11-499 chr11 14988476 14988708 + 15.1 0.000 Intergenic Intergenic -16241 NR_125898 796 Hs.37058 NM_001741 ENSG00000110680 CALCA CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT calcitonin related polypeptide alpha protein-coding chr5-128 chr5 158145299 158145531 + 15.1 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 264358 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr10-630 chr10 29141825 29142057 + 15.1 0.000 Intergenic Intergenic -147129 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr3-833 chr3 123141348 123141580 + 15.1 0.000 intron (NM_006810, intron 11 of 16) intron (NM_006810, intron 11 of 16) -20330 NR_106960 102465667 NR_106960 ENSG00000284421 MIR7110 hsa-mir-7110 microRNA 7110 ncRNA chr5-713 chr5 150074244 150074476 + 15.1 0.000 intron (NM_001288705, intron 5 of 20) AluSc8|SINE|Alu 12280 NR_109969 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr22-379 chr22 30535350 30535582 + 15.1 0.000 intron (NM_001193336, intron 2 of 11) MIRc|SINE|MIR 7188 NM_001353441 730005 Hs.505605 NM_001193336 ENSG00000214491 SEC14L6 - SEC14 like lipid binding 6 protein-coding chr1-1202 chr1 936569 936801 + 15.1 0.000 intron (NM_152486, intron 5 of 13) intron (NM_152486, intron 5 of 13) 10954 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr10-608 chr10 10798151 10798383 + 15.1 0.000 promoter-TSS (NM_001326328) promoter-TSS (NM_001326328) -458 NM_001326328 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding chr3-241 chr3 39321255 39321487 + 15.1 0.000 Intergenic LTR8|LTR|ERV1 -8338 NM_005201 1237 Hs.113222 NM_005201 ENSG00000179934 CCR8 CC-CKR-8|CCR-8|CDw198|CKRL1|CMKBR8|CMKBRL2|CY6|GPRCY6|TER1 C-C motif chemokine receptor 8 protein-coding chr22-221 chr22 41092274 41092506 + 15.1 0.000 promoter-TSS (NM_001362843) promoter-TSS (NM_001362843) -123 NR_031694 100302237 NR_031694 ENSG00000284015 MIR1281 MIRN1281|hsa-mir-1281 microRNA 1281 ncRNA chr1-1588 chr1 224635443 224635675 + 15.1 0.000 intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 19242 NR_136287 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr15-382 chr15 45549944 45550176 + 15.1 0.000 intron (NR_022014, intron 5 of 5) intron (NR_022014, intron 5 of 5) 12809 NR_145777 109617005 NR_145777 ENSG00000207516 SNORA41B - small nucleolar RNA, H/ACA box 41B snoRNA chr2-968 chr2 69297444 69297676 + 15.1 0.000 Intergenic Intergenic 89667 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr2-871 chr2 1706099 1706331 + 15.1 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 38300 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr19-365 chr19 45450610 45450842 + 15.1 0.000 promoter-TSS (NM_001369417) promoter-TSS (NM_001369417) 40 NM_001369417 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr3-329 chr3 132784574 132784806 + 14.9 0.000 intron (NR_002811, intron 3 of 10) L1PA17|LINE|L1 -62231 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr13-114 chr13 43786218 43786450 + 14.9 0.000 intron (NR_145132, intron 1 of 1) CpG 638 NM_001242863 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr14-293 chr14 64847522 64847754 + 14.9 0.000 intron (NM_001355436, intron 1 of 35) intron (NM_001355436, intron 1 of 35) -24258 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr1-1307 chr1 29259780 29260012 + 14.9 0.000 exon (NM_001195001, exon 6 of 30) exon (NM_001195001, exon 6 of 30) 23374 NM_133177 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr3-286 chr3 126494543 126494775 + 14.9 0.000 intron (NM_001165974, intron 16 of 20) intron (NM_001165974, intron 16 of 20) -18740 NM_001040653 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr1-1443 chr1 150967874 150968106 + 14.9 0.000 intron (NM_181746, intron 4 of 10) intron (NM_181746, intron 4 of 10) 6845 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr7-255 chr7 2895071 2895303 + 14.9 0.000 Intergenic AluSx3|SINE|Alu -50879 NM_007353 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr6-634 chr6 158276113 158276345 + 14.9 0.000 Intergenic AluSz|SINE|Alu -36236 NM_001007466 56995 Hs.486993 NM_020245 ENSG00000130338 TULP4 TUSP TUB like protein 4 protein-coding chr12-183 chr12 54379215 54379447 + 14.9 0.000 intron (NM_015481, intron 1 of 6) intron (NM_015481, intron 1 of 6) 5402 NM_015481 25946 Hs.505653 NM_015481 ENSG00000161642 ZNF385A HZF|RZF|ZFP385|ZNF385 zinc finger protein 385A protein-coding chr22-274 chr22 29065136 29065368 + 14.9 0.000 Intergenic Intergenic -3333 NM_015370 25770 Hs.50891 NM_015370 ENSG00000100249 C22orf31 HS747E2A|bK747E2.1 chromosome 22 open reading frame 31 protein-coding chr1-1532 chr1 201016901 201017133 + 14.9 0.000 intron (NM_001252103, intron 1 of 33) intron (NM_001252103, intron 1 of 33) 6697 NM_001252103 23046 Hs.169182 NM_017596 ENSG00000116852 KIF21B - kinesin family member 21B protein-coding chr12-512 chr12 51591634 51591866 + 14.9 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 514 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr14-459 chr14 99906887 99907119 + 14.9 0.000 intron (NM_004434, intron 9 of 21) intron (NM_004434, intron 9 of 21) -64419 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr2-1031 chr2 131105225 131105457 + 14.9 0.000 5' UTR (NM_001267063, exon 1 of 9) 5' UTR (NM_001267063, exon 1 of 9) 494 NM_001267068 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chr2-969 chr2 71017217 71017449 + 14.9 0.000 Intergenic SATR1|Satellite|Satellite -6742 NR_002185 79315 Hs.327033 NR_002185 ENSG00000205847 OR7E91P - olfactory receptor family 7 subfamily E member 91 pseudogene pseudo chr13-254 chr13 25988707 25988939 + 14.9 0.000 intron (NM_016529, intron 35 of 36) intron (NM_016529, intron 35 of 36) 62237 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr15-208 chr15 42155935 42156167 + 14.9 0.000 intron (NM_213600, intron 1 of 19) intron (NM_213600, intron 1 of 19) 585 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr19-531 chr19 36041981 36042213 + 14.9 0.000 intron (NM_001331104, intron 1 of 3) L1MB2|LINE|L1 -9224 NM_015526 25999 Hs.466539 NM_015526 ENSG00000105270 CLIP3 CLIPR-59|CLIPR59|RSNL1 CAP-Gly domain containing linker protein 3 protein-coding chr6-550 chr6 77317379 77317611 + 14.9 0.000 Intergenic AluY|SINE|Alu 146527 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chr12-754 chr12 126553314 126553546 + 14.9 0.000 Intergenic Intergenic -104103 NR_147498 283435 Hs.667334 NR_147498 LINC02825 - long intergenic non-protein coding RNA 2825 ncRNA chr14-260 chr14 77703168 77703400 + 14.9 0.000 intron (NM_006020, intron 2 of 5) intron (NM_006020, intron 2 of 5) 4739 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr6-643 chr6 164434148 164434380 + 14.9 0.000 Intergenic Intergenic 387799 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA chr11-888 chr11 70185251 70185483 + 14.9 0.000 intron (NM_018043, intron 24 of 25) intron (NM_018043, intron 24 of 25) -17796 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr4-554 chr4 58115951 58116183 + 14.9 0.000 Intergenic Intergenic 420261 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA chr3-669 chr3 146212315 146212547 + 14.9 0.000 intron (NM_001128306, intron 3 of 6) L1MB7|LINE|L1 38184 NM_001128305 57088 Hs.477869 NM_020353 ENSG00000114698 PLSCR4 TRA1 phospholipid scramblase 4 protein-coding chr2-644 chr2 98685128 98685360 + 14.9 0.000 intron (NM_012214, intron 2 of 15) AluJo|SINE|Alu -21771 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding chr4-610 chr4 119377681 119377913 + 14.9 0.000 Intergenic Intergenic 32863 NR_037596 401149 Hs.448518 NR_037596 LINC01061 - long intergenic non-protein coding RNA 1061 ncRNA chrX-93 chrX 41253671 41253903 + 14.9 0.000 Intergenic CpG -21952 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr20-225 chr20 39775198 39775430 + 14.9 0.000 Intergenic Intergenic -229147 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr7-642 chr7 2002426 2002658 + 14.9 0.000 intron (NM_001013837, intron 13 of 18) intron (NM_001013837, intron 13 of 18) -61971 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr1-1277 chr1 20973645 20973877 + 14.9 0.000 intron (NM_003760, intron 5 of 31) intron (NM_003760, intron 5 of 31) 14671 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr5-636 chr5 78626304 78626536 + 14.9 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 22352 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr7-669 chr7 10818973 10819205 + 14.9 0.000 Intergenic L2a|LINE|L2 -39145 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr1-1436 chr1 146989543 146989775 + 14.9 0.000 exon (NM_001278141, exon 31 of 37) exon (NM_001278141, exon 31 of 37) 51114 NM_001278141 149013 Hs.666981 NM_001278141 ENSG00000268043 NBPF12 COAS1|KIAA1245 NBPF member 12 protein-coding chr1-1313 chr1 30888183 30888415 + 14.9 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 20459 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr2-729 chr2 228917169 228917401 + 14.9 0.000 Intergenic ERVL-E-int|LTR|ERVL -305890 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr2-829 chr2 183124149 183124381 + 14.9 0.000 promoter-TSS (NM_001287585) promoter-TSS (NM_001287585) -90 NR_109856 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding chr1-1234 chr1 9127815 9128047 + 14.9 0.000 intron (NM_024980, intron 1 of 3) intron (NM_024980, intron 1 of 3) 1171 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding chr4-423 chr4 27920448 27920680 + 14.9 0.000 Intergenic Intergenic 703085 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr8-512 chr8 72649922 72650154 + 14.9 0.000 intron (NM_004770, intron 2 of 2) intron (NM_004770, intron 2 of 2) -82007 NR_110656 101926908 Hs.680588 NR_110656 ENSG00000253726 LOC101926908 - uncharacterized LOC101926908 ncRNA chr17-284 chr17 81528651 81528883 + 14.9 0.000 exon (NM_001077182, exon 1 of 5) exon (NM_001077182, exon 1 of 5) 390 NM_001077182 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding chr11-397 chr11 73095717 73095949 + 14.9 0.000 intron (NM_014824, intron 2 of 19) L1M7|LINE|L1 46485 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr8-165 chr8 97730692 97730924 + 14.9 0.000 TTS (NM_001363138) TTS (NM_001363138) -44980 NM_018407 55353 Hs.492314 NM_018407 ENSG00000104341 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding chr2-684 chr2 165427848 165428080 + 14.9 0.000 Intergenic MER52D|LTR|ERV1 -41734 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr4-256 chr4 87235987 87236219 + 14.9 0.000 Intergenic Intergenic -15485 NM_001292006 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr13-71 chr13 36297850 36298082 + 14.9 0.000 promoter-TSS (NM_001144982) promoter-TSS (NM_001144982) -111 NM_001144983 728591 Hs.656745 NM_001144981 ENSG00000242715 CCDC169 C13orf38 coiled-coil domain containing 169 protein-coding chr7-762 chr7 77675631 77675863 + 14.9 0.000 intron (NR_134251, intron 2 of 3) L1MC|LINE|L1 20518 NR_134254 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr3-611 chr3 24451568 24451800 + 14.9 0.000 intron (NM_001354709, intron 1 of 10) intron (NM_001354709, intron 1 of 10) -42403 NR_046244 644990 Hs.631912 NR_046244 THRB-AS1 - THRB antisense RNA 1 ncRNA chr22-301 chr22 41572039 41572271 + 14.9 0.000 intron (NM_014460, intron 2 of 3) intron (NM_014460, intron 2 of 3) 11145 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr15-172 chr15 52179665 52179897 + 14.9 0.000 promoter-TSS (NR_102751) promoter-TSS (NR_102751) 144 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr16-608 chr16 31265232 31265464 + 14.9 0.000 intron (NM_001145808, intron 2 of 29) intron (NM_001145808, intron 2 of 29) 5373 NM_001145808 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding chr7-632 chr7 472024 472256 + 14.9 0.000 Intergenic Intergenic 47704 NM_002607 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr12-365 chr12 110371590 110371822 + 14.9 0.000 Intergenic Intergenic 32024 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr11-895 chr11 73158274 73158506 + 14.9 0.000 Intergenic Intergenic -16072 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr10-747 chr10 95656631 95656863 + 14.9 0.000 promoter-TSS (NM_001323417) promoter-TSS (NM_001323417) -36 NM_001323419 5832 Hs.500645 NM_002860 ENSG00000059573 ALDH18A1 ADCL3|ARCL3A|GSAS|P5CS|PYCS|SPG9|SPG9A|SPG9B aldehyde dehydrogenase 18 family member A1 protein-coding chr16-288 chr16 1363426 1363658 + 14.9 0.000 non-coding (NR_160278, exon 16 of 16) non-coding (NR_160278, exon 16 of 16) 11611 NM_032520 84572 Hs.241575 NM_032520 ENSG00000090581 GNPTG C16orf27|GNPTAG|LP2537|RJD9 N-acetylglucosamine-1-phosphate transferase subunit gamma protein-coding chrX-276 chrX 121167548 121167780 + 14.9 0.000 Intergenic Intergenic 120054 NM_012084 2747 Hs.368538 NM_012084 ENSG00000182890 GLUD2 GDH2|GLUDP1 glutamate dehydrogenase 2 protein-coding chr7-688 chr7 31938884 31939116 + 14.9 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) 131407 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr5-169 chr5 132497807 132498039 + 14.9 0.000 Intergenic Intergenic -7150 NM_001354925 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr9-384 chr9 133659332 133659564 + 14.9 0.000 TTS (NM_000787) TTS (NM_000787) -2040 NR_102735 138948 Hs.223858 NR_002783 ENSG00000225756 DBH-AS1 NCRNA00118 DBH antisense RNA 1 ncRNA chr2-639 chr2 85312525 85312757 + 14.9 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger 15348 NM_001368095 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr14-211 chr14 44153579 44153811 + 14.9 0.000 Intergenic L4_B_Mam|LINE|RTE-X 353588 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr16-527 chr16 81232765 81232997 + 14.9 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -5808 NM_017429 53630 Hs.212172 NM_017429 ENSG00000135697 BCO1 BCDO|BCDO1|BCMO|BCMO1|BCO beta-carotene oxygenase 1 protein-coding chr11-906 chr11 73980376 73980608 + 14.9 0.000 intron (NM_003355, intron 2 of 7) intron (NM_003355, intron 2 of 7) 2352 NM_003355 7351 Hs.80658 NM_003355 ENSG00000175567 UCP2 BMIQ4|SLC25A8|UCPH uncoupling protein 2 protein-coding chr4-427 chr4 41155722 41155954 + 14.9 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 58704 NM_001166050 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr9-111 chr9 130144265 130144497 + 14.9 0.000 promoter-TSS (NR_135124) promoter-TSS (NR_135124) -162 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr1-1108 chr1 44894296 44894528 + 14.9 0.000 intron (NM_001166588, intron 6 of 9) intron (NM_001166588, intron 6 of 9) -51159 NM_003738 8643 Hs.591497 NM_003738 ENSG00000117425 PTCH2 PTC2 patched 2 protein-coding chr3-317 chr3 40781233 40781465 + 14.9 0.000 Intergenic Intergenic 256389 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr4-576 chr4 83357368 83357600 + 14.9 0.000 Intergenic L1ME2z|LINE|L1 -22331 NM_006665 10855 Hs.44227 NM_006665 ENSG00000173083 HPSE HPA|HPA1|HPR1|HPSE1|HSE1 heparanase protein-coding chr6-482 chr6 2104272 2104504 + 14.9 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 71603 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr2-267 chr2 60657470 60657702 + 14.9 0.000 Intergenic AluSz|SINE|Alu -98682 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding chr9-469 chr9 127974957 127975189 + 14.9 0.000 intron (NM_001035254, intron 1 of 10) intron (NM_001035254, intron 1 of 10) 5916 NM_001035254 399665 Hs.535972 NM_203305 ENSG00000167106 FAM102A C9orf132|EEIG1|SYM-3A|bA203J24.7 family with sequence similarity 102 member A protein-coding chrX-66 chrX 124890766 124890998 + 14.9 0.000 intron (NM_014253, intron 3 of 30) L1MA3|LINE|L1 72935 NM_001163278 10178 Hs.23796 NM_014253 ENSG00000009694 TENM1 ODZ1|ODZ3|TEN-M1|TNM|TNM1|ten-1 teneurin transmembrane protein 1 protein-coding chr21-22 chr21 10655493 10655725 + 14.9 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 134095 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr16-312 chr16 36853476 36853708 + 14.9 0.000 Intergenic ALR/Alpha|Satellite|centr 1107040 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA chr17-876 chr17 81469644 81469876 + 14.9 0.000 Intergenic Intergenic -18572 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chrX-83 chrX 118716824 118717056 + 14.9 0.000 Intergenic LTR12C|LTR|ERV1 -10666 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr1-958 chr1 111965195 111965427 + 14.9 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) 23844 NM_172198 3752 Hs.666367 NM_004980 ENSG00000171385 KCND3 BRGDA9|KCND3L|KCND3S|KSHIVB|KV4.3|SCA19|SCA22 potassium voltage-gated channel subfamily D member 3 protein-coding chr8-311 chr8 57918654 57918886 + 14.9 0.000 Intergenic THE1B|LTR|ERVL-MaLR -59588 NR_130934 100505477 Hs.434693 NR_130934 ENSG00000205293 LINC01602 T1560 long intergenic non-protein coding RNA 1602 ncRNA chr2-949 chr2 48963256 48963488 + 14.9 0.000 exon (NM_181446, exon 9 of 9) exon (NM_181446, exon 9 of 9) -96231 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA chr10-177 chr10 13001171 13001403 + 14.9 0.000 exon (NM_031455, exon 1 of 3) exon (NM_031455, exon 1 of 3) 426 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr15-183 chr15 67128099 67128331 + 14.9 0.000 intron (NM_001145102, intron 1 of 8) intron (NM_001145102, intron 1 of 8) 2499 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr6-534 chr6 44035747 44035979 + 14.9 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) -32213 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr18-129 chr18 44729954 44730186 + 14.9 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 49182 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr8-300 chr8 38450780 38451012 + 14.9 0.000 intron (NM_001174064, intron 2 of 18) intron (NM_001174064, intron 2 of 18) 16828 NM_001174065 2260 Hs.264887 NM_015850 ENSG00000077782 FGFR1 BFGFR|CD331|CEK|ECCL|FGFBR|FGFR-1|FLG|FLT-2|FLT2|HBGFR|HH2|HRTFDS|KAL2|N-SAM|OGD|bFGF-R-1 fibroblast growth factor receptor 1 protein-coding chr1-1184 chr1 208756428 208756660 + 14.7 0.000 Intergenic Intergenic 27856 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA chr3-837 chr3 125651296 125651528 + 14.7 0.000 Intergenic MIRb|SINE|MIR -55915 NM_022776 114885 Hs.477440 NM_022776 ENSG00000144909 OSBPL11 ORP-11|ORP11|OSBP12|TCCCIA00292 oxysterol binding protein like 11 protein-coding chr2-986 chr2 95014620 95014852 + 14.7 0.000 Intergenic Intergenic -10919 NM_022438 4118 Hs.80395 NM_002371 ENSG00000172005 MAL MVP17|VIP17 mal, T cell differentiation protein protein-coding chr2-1016 chr2 113997707 113997939 + 14.7 0.000 intron (NR_148508, intron 1 of 1) L1M4b|LINE|L1 -17839 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr14-456 chr14 99652470 99652702 + 14.7 0.000 exon (NM_001127258, exon 2 of 9) exon (NM_001127258, exon 2 of 9) 7476 NM_001127258 84439 Hs.131714 NM_032425 ENSG00000182218 HHIPL1 KIAA1822|UNQ9245 HHIP like 1 protein-coding chr19-253 chr19 4623747 4623979 + 14.7 0.000 Intergenic AluJo|SINE|Alu -15653 NM_152362 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr21-104 chr21 7957080 7957312 + 14.7 0.000 Intergenic (CATTC)n|Satellite|Satellite -127564 NM_001369869 102723475 NM_001330065 ENSG00000276289 KCNE1B - potassium voltage-gated channel subfamily E regulatory subunit 1B protein-coding chr5-587 chr5 34411689 34411921 + 14.7 0.000 Intergenic Intergenic -167081 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr17-533 chr17 19541532 19541764 + 14.7 0.000 intron (NM_018242, intron 1 of 16) intron (NM_018242, intron 1 of 16) 7794 NM_018242 55244 Hs.232054 NM_018242 ENSG00000142494 SLC47A1 MATE1 solute carrier family 47 member 1 protein-coding chr7-631 chr7 433320 433552 + 14.7 0.000 Intergenic Intergenic 54011 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr3-702 chr3 11770123 11770355 + 14.7 0.000 Intergenic Intergenic -49700 NM_001284390 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr5-252 chr5 150138669 150138901 + 14.7 0.000 intron (NM_002609, intron 1 of 22) intron (NM_002609, intron 1 of 22) 17060 NR_149150 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr17-884 chr17 82154187 82154419 + 14.7 0.000 3' UTR (NM_001316321, exon 15 of 15) 3' UTR (NM_001316321, exon 15 of 15) -56067 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr10-624 chr10 21533570 21533802 + 14.7 0.000 promoter-TSS (NR_136736) promoter-TSS (NR_136736) 337 NM_001324296 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr4-440 chr4 74099178 74099410 + 14.7 0.000 promoter-TSS (NM_002089) promoter-TSS (NM_002089) -99 NM_002089 2920 Hs.75765 NM_002089 ENSG00000081041 CXCL2 CINC-2a|GRO2|GROb|MGSA-b|MIP-2a|MIP2|MIP2A|SCYB2 C-X-C motif chemokine ligand 2 protein-coding chr12-259 chr12 97922331 97922563 + 14.7 0.000 Intergenic Intergenic 16674 NR_039716 100616287 NR_039716 ENSG00000265861 MIR4495 - microRNA 4495 ncRNA chr12-600 chr12 27795994 27796226 + 14.7 0.000 intron (NM_020782, intron 2 of 2) intron (NM_020782, intron 2 of 2) 15877 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr19-487 chr19 42072002 42072234 + 14.7 0.000 intron (NM_001330519, intron 1 of 1) intron (NM_001330519, intron 1 of 1) 3641 NM_001330519 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr5-560 chr5 6712380 6712612 + 14.7 0.000 promoter-TSS (NM_006999) promoter-TSS (NM_006999) -936 NM_006999 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr2-609 chr2 44944604 44944836 + 14.7 0.000 exon (NM_005413, exon 2 of 2) exon (NM_005413, exon 2 of 2) -2842 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr1-692 chr1 202539869 202540101 + 14.7 0.000 promoter-TSS (NM_001197131) promoter-TSS (NM_001197131) -129 NM_001197131 4660 Hs.444403 NM_002481 ENSG00000077157 PPP1R12B MYPT2|PP1bp55 protein phosphatase 1 regulatory subunit 12B protein-coding chr4-661 chr4 161277454 161277686 + 14.7 0.000 Intergenic LTR12C|LTR|ERV1 -745163 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr1-770 chr1 88457370 88457602 + 14.7 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -226658 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr9-716 chr9 133787967 133788199 + 14.7 0.000 intron (NM_001134398, intron 15 of 29) intron (NM_001134398, intron 15 of 29) -48128 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr22-378 chr22 30423296 30423528 + 14.7 0.000 3' UTR (NM_012429, exon 12 of 12) 3' UTR (NM_012429, exon 12 of 12) -2356 NM_001003704 51537 Hs.713636 NM_016498 ENSG00000242114 MTFP1 HSPC242|MTP18 mitochondrial fission process 1 protein-coding chr1-1285 chr1 22876972 22877204 + 14.7 0.000 intron (NM_004442, intron 5 of 15) intron (NM_004442, intron 5 of 15) -13862 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr19-579 chr19 8420971 8421203 + 14.7 0.000 intron (NM_001369776, intron 2 of 5) AluJo|SINE|Alu 2735 NM_001369779 51257 Hs.631861 NM_016496 ENSG00000099785 MARCH2 HSPC240|MARCH-II|RNF172 membrane associated ring-CH-type finger 2 protein-coding chr7-749 chr7 68778441 68778673 + 14.7 0.000 Intergenic AluSz|SINE|Alu 758304 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr14-412 chr14 66070008 66070240 + 14.7 0.000 Intergenic LTR33|LTR|ERVL -416247 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr3-485 chr3 36663674 36663906 + 14.7 0.000 Intergenic Charlie29a|DNA|hAT-Charlie 76071 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding chr5-653 chr5 107983172 107983404 + 14.7 0.000 intron (NM_001163315, intron 7 of 8) AluJo|SINE|Alu -312351 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding chr5-350 chr5 142326143 142326375 + 14.7 0.000 intron (NR_120664, intron 1 of 3) intron (NR_120664, intron 1 of 3) 966 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr16-393 chr16 1215142 1215374 + 14.7 0.000 exon (NM_021098, exon 29 of 35) exon (NM_021098, exon 29 of 35) 10010 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr1-1238 chr1 9483230 9483462 + 14.7 0.000 Intergenic Intergenic -54350 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr22-433 chr22 46282702 46282934 + 14.7 0.000 intron (NM_017931, intron 7 of 13) intron (NM_017931, intron 7 of 13) 13842 NR_024009 150384 Hs.348663 NR_024009 ENSG00000277232 GTSE1-DT CN5H6.4|GTSE1-AS1|LL22NC03-5H6.6 GTSE1 divergent transcript ncRNA chr19-665 chr19 2341252 2341484 + 14.7 0.000 intron (NM_001077238, intron 8 of 14) intron (NM_001077238, intron 8 of 14) 12684 NM_152988 56928 Hs.744026 NM_152988 ENSG00000005206 SPPL2B IMP-4|IMP4|PSH4|PSL1 signal peptide peptidase like 2B protein-coding chr11-596 chr11 64844049 64844281 + 14.7 0.000 intron (NM_017525, intron 1 of 36) intron (NM_017525, intron 1 of 36) 488 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr20-359 chr20 41310086 41310318 + 14.7 0.000 Intergenic L2|LINE|L2 -10082 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr22-322 chr22 19720891 19721123 + 14.7 0.000 intron (NM_001009939, intron 7 of 10) CpG-18755 -2536 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr6-578 chr6 111605760 111605992 + 14.7 0.000 promoter-TSS (NM_147200) promoter-TSS (NM_147200) 2 NM_147200 10758 Hs.561514 NM_147200 ENSG00000056972 TRAF3IP2 ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13 TRAF3 interacting protein 2 protein-coding chr9-505 chr9 1918712 1918944 + 14.7 0.000 Intergenic Intergenic -96519 NM_139045 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr2-1042 chr2 149101031 149101263 + 14.7 0.000 intron (NM_001317004, intron 1 of 6) intron (NM_001317004, intron 1 of 6) -17027 NM_001317002 130576 Hs.357567 NM_177964 ENSG00000150556 LYPD6B CT116|LYPD7 LY6/PLAUR domain containing 6B protein-coding chr13-331 chr13 99528061 99528293 + 14.7 0.000 intron (NM_004800, intron 3 of 16) intron (NM_004800, intron 3 of 16) 26705 NM_004800 9375 Hs.607896 NM_004800 ENSG00000125304 TM9SF2 P76 transmembrane 9 superfamily member 2 protein-coding chr2-432 chr2 20350934 20351166 + 14.7 0.000 promoter-TSS (NM_001352918) promoter-TSS (NM_001352918) -66 NM_001352918 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding GL000220.1-1 GL000220.1 144702 144934 + 14.7 0.000 NA NA NA NA chr6-358 chr6 86937296 86937528 + 14.7 0.000 promoter-TSS (NM_000865) promoter-TSS (NM_000865) -116 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr1-1592 chr1 226404139 226404371 + 14.7 0.000 intron (NM_001618, intron 1 of 22) intron (NM_001618, intron 1 of 22) 3838 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr13-307 chr13 67990994 67991226 + 14.7 0.000 Intergenic MSTB|LTR|ERVL-MaLR 618723 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr1-1387 chr1 83726332 83726564 + 14.7 0.000 intron (NR_119375, intron 2 of 2) intron (NR_119375, intron 2 of 2) 134098 NR_119374 101927560 Hs.559661 NR_119374 ENSG00000233008 LOC101927560 - uncharacterized LOC101927560 ncRNA chr1-1609 chr1 238288589 238288821 + 14.7 0.000 Intergenic Intergenic 197312 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr4-208 chr4 8556729 8556961 + 14.7 0.000 Intergenic AluSq2|SINE|Alu -23392 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr22-187 chr22 41197202 41197434 + 14.7 0.000 non-coding (NR_110514, exon 1 of 3) non-coding (NR_110514, exon 1 of 3) 183 NR_110514 101927279 Hs.517517 NR_110514 EP300-AS1 - EP300 antisense RNA 1 ncRNA chr10-468 chr10 85591697 85591929 + 14.7 0.000 intron (NR_038986, intron 2 of 2) L1ME3A|LINE|L1 14082 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr7-843 chr7 135190104 135190336 + 14.7 0.000 intron (NM_014149, intron 11 of 14) L1MEd|LINE|L1 16858 NR_106764 102465254 NR_106764 ENSG00000277138 MIR6509 hsa-mir-6509 microRNA 6509 ncRNA chr14-480 chr14 104103571 104103803 + 14.7 0.000 intron (NM_001080464, intron 7 of 15) (CCCTGCAG)n|Simple_repeat|Simple_repeat -13718 NR_029620 406986 NR_029620 ENSG00000207568 MIR203A MIR203|MIRN203|hsa-mir-203a|miR-203|miRNA203|mir-203a microRNA 203a ncRNA chr6-290 chr6 113564817 113565049 + 14.7 0.000 Intergenic Intergenic 85142 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chrX-164 chrX 21839435 21839667 + 14.7 0.000 promoter-TSS (NM_015884) promoter-TSS (NM_015884) -66 NM_015884 51360 Hs.443490 NM_015884 ENSG00000012174 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OI19|OLMSX|S2P membrane bound transcription factor peptidase, site 2 protein-coding chr8-419 chr8 132853325 132853557 + 14.7 0.000 Intergenic L1MC|LINE|L1 -13517 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr11-796 chr11 20642094 20642326 + 14.7 0.000 intron (NM_004211, intron 13 of 15) MER45A|DNA|hAT-Tip100 -27341 NM_001288714 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding chr7-497 chr7 73410368 73410600 + 14.7 0.000 Intergenic Intergenic -23294 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding chr7-860 chr7 149496730 149496962 + 14.7 0.000 intron (NM_152557, intron 1 of 6) intron (NM_152557, intron 1 of 6) 961 NM_001163474 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr6-573 chr6 108556990 108557222 + 14.7 0.000 Intergenic Intergenic -2719 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr8-234 chr8 132193900 132194132 + 14.7 0.000 intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) -88751 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr5-426 chr5 111935328 111935560 + 14.7 0.000 intron (NR_046678, intron 1 of 3) intron (NR_046678, intron 1 of 3) 22936 NR_046678 100873948 Hs.147716 NR_046678 ENSG00000250095 NREP-AS1 - NREP antisense RNA 1 ncRNA chr14-475 chr14 103240199 103240431 + 14.7 0.000 Intergenic AluJo|SINE|Alu -51287 NR_033938 100131366 Hs.147881 NR_033938 ENSG00000251533 LINC00605 - long intergenic non-protein coding RNA 605 ncRNA chr9-411 chr9 33777679 33777911 + 14.7 0.000 intron (NM_001197098, intron 1 of 4) L1MEg|LINE|L1 -17766 NM_002771 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr13-253 chr13 25154474 25154706 + 14.7 0.000 Intergenic Intergenic 17577 NM_199138 219287 Hs.528335 NM_152704 ENSG00000165566 AMER2 FAM123A APC membrane recruitment protein 2 protein-coding chr22-361 chr22 19516027 19516259 + 14.7 0.000 intron (NM_001369291, intron 15 of 18) intron (NM_001369291, intron 15 of 18) 8267 NM_001363066 7122 Hs.505337 NM_003277 ENSG00000184113 CLDN5 AWAL|BEC1|CPETRL1|TMDVCF|TMVCF claudin 5 protein-coding chr6-503 chr6 16985889 16986121 + 14.7 0.000 Intergenic Intergenic -116253 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr5-724 chr5 156626033 156626265 + 14.7 0.000 intron (NM_001128209, intron 5 of 7) MER20|DNA|hAT-Charlie -224146 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding chr15-349 chr15 24677472 24677704 + 14.7 0.000 exon (NM_018958, exon 1 of 1) exon (NM_018958, exon 1 of 1) 2194 NM_018958 23742 Hs.649663 NM_018958 ENSG00000185823 NPAP1 C15orf2 nuclear pore associated protein 1 protein-coding chr14-378 chr14 22848853 22849085 + 14.7 0.000 Intergenic Intergenic 12384 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr10-496 chr10 112446827 112447059 + 14.7 0.000 promoter-TSS (NM_001303134) promoter-TSS (NM_001303134) 16 NM_001351083 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr18-192 chr18 12006611 12006843 + 14.7 0.000 intron (NM_014214, intron 2 of 7) intron (NM_014214, intron 2 of 7) 25220 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr3-754 chr3 46257384 46257616 + 14.7 0.000 intron (NM_178329, intron 1 of 1) intron (NM_178329, intron 1 of 1) 15040 NM_001837 1232 Hs.506190 NM_001837 ENSG00000183625 CCR3 CC-CKR-3|CD193|CKR3|CMKBR3 C-C motif chemokine receptor 3 protein-coding chr1-786 chr1 158091293 158091525 + 14.7 0.000 exon (NM_001286349, exon 9 of 13) exon (NM_001286349, exon 9 of 13) 49231 NR_033946 646268 Hs.506902 NR_033946 ENSG00000231666 LINC01704 - long intergenic non-protein coding RNA 1704 ncRNA chr20-133 chr20 24520610 24520842 + 14.7 0.000 intron (NM_001323606, intron 2 of 4) intron (NM_001323606, intron 2 of 4) 50765 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr2-738 chr2 237669619 237669851 + 14.7 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -22429 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr3-493 chr3 46566306 46566538 + 14.7 0.000 promoter-TSS (NM_024512) promoter-TSS (NM_024512) -120 NM_024512 79442 Hs.657345 NM_024512 ENSG00000163827 LRRC2 - leucine rich repeat containing 2 protein-coding chr3-688 chr3 5004944 5005176 + 14.7 0.000 Intergenic L2b|LINE|L2 -25099 NR_125915 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr5-537 chr5 151573611 151573843 + 14.7 0.000 Intergenic L3|LINE|CR1 -4783 NM_001447 2196 Hs.591255 NM_001447 ENSG00000086570 FAT2 CDHF8|CDHR9|HFAT2|MEGF1|SCA45 FAT atypical cadherin 2 protein-coding chr3-752 chr3 45984511 45984743 + 14.7 0.000 intron (NM_024513, intron 2 of 17) intron (NM_024513, intron 2 of 17) 11197 NM_024513 79443 Hs.200227 NM_024513 ENSG00000163820 FYCO1 CATC2|CTRCT18|RUFY3|ZFYVE7 FYVE and coiled-coil domain containing 1 protein-coding chr12-486 chr12 132444328 132444560 + 14.7 0.000 Intergenic L1MEc|LINE|L1 -45707 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr1-944 chr1 91684588 91684820 + 14.7 0.000 intron (NR_036634, intron 17 of 17) intron (NR_036634, intron 17 of 17) 183596 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr9-322 chr9 128930262 128930494 + 14.7 0.000 intron (NM_001100877, intron 2 of 9) AluJb|SINE|Alu 8095 NM_001100877 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr18-217 chr18 47565476 47565708 + 14.7 0.000 intron (NR_147192, intron 1 of 2) MLT1G|LTR|ERVL-MaLR 185096 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr11-694 chr11 65144281 65144513 + 14.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -9878 NM_172230 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr12-245 chr12 13098481 13098713 + 14.7 0.000 intron (NM_001080555, intron 1 of 6) intron (NM_001080555, intron 1 of 6) -2922 NM_031289 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr5-174 chr5 160157304 160157536 + 14.7 0.000 Intergenic MIRb|SINE|MIR -29961 NM_001130958 2172 Hs.519719 NM_001445 ENSG00000170231 FABP6 I-15P|I-BABP|I-BALB|I-BAP|ILBP|ILBP3|ILLBP fatty acid binding protein 6 protein-coding chr18-110 chr18 84809 85041 + 14.7 0.000 Intergenic Intergenic -24140 NR_033770 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo chrX-278 chrX 124157173 124157405 + 14.7 0.000 Intergenic HERVL-int|LTR|ERVL -175371 NM_001355534 100132015 NM_001355534 ENSG00000282419 TEX13D - TEX13 family member D protein-coding chr5-379 chr5 28540898 28541130 + 14.5 0.000 Intergenic AluSz|SINE|Alu -253349 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr1-1591 chr1 226135476 226135708 + 14.5 0.000 Intergenic Intergenic -12411 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr21-84 chr21 43916748 43916980 + 14.5 0.000 promoter-TSS (NM_001369880) promoter-TSS (NM_001369880) 76 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr3-508 chr3 52493327 52493559 + 14.5 0.000 TTS (NM_007184) TTS (NM_007184) -1895 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr14-296 chr14 67513602 67513834 + 14.5 0.000 intron (NM_001348549, intron 1 of 3) intron (NM_001348549, intron 1 of 3) 1497 NM_001348544 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr10-577 chr10 103894671 103894903 + 14.5 0.000 intron (NM_024928, intron 7 of 9) intron (NM_024928, intron 7 of 9) 23397 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1 subunit of CST complex protein-coding chr6-571 chr6 107303047 107303279 + 14.5 0.000 intron (NM_020381, intron 2 of 7) MSTD|LTR|ERVL-MaLR 156401 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr4-622 chr4 127212837 127213069 + 14.5 0.000 Intergenic Intergenic -420004 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr19-858 chr19 47825919 47826151 + 14.5 0.000 intron (NM_000554, intron 1 of 3) intron (NM_000554, intron 1 of 3) 4098 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr17-763 chr17 30000883 30001115 + 14.5 0.000 intron (NR_026738, intron 7 of 15) MER74B|LTR|ERVL 59365 NM_198529 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr4-671 chr4 181995885 181996117 + 14.5 0.000 Intergenic Intergenic 148514 NR_027107 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr2-1138 chr2 231581109 231581341 + 14.5 0.000 Intergenic LTR8|LTR|ERV1 -11639 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr2-916 chr2 36562351 36562583 + 14.5 0.000 intron (NM_001042548, intron 5 of 8) intron (NM_001042548, intron 5 of 8) 35701 NM_001042548 9637 Hs.258563 NM_005102 ENSG00000171055 FEZ2 HUM3CL fasciculation and elongation protein zeta 2 protein-coding chrX-79 chrX 74536633 74536865 + 14.5 0.000 Intergenic CpG 77875 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr9-407 chr9 30932444 30932676 + 14.5 0.000 Intergenic Intergenic 448930 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr15-237 chr15 35624979 35625211 + 14.5 0.000 intron (NR_038251, intron 1 of 2) intron (NR_038251, intron 1 of 2) 78900 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA chr16-205 chr16 19469204 19469436 + 14.5 0.000 intron (NM_024780, intron 5 of 17) AluSq2|SINE|Alu 12859 NM_024780 79838 Hs.115838 NM_024780 ENSG00000103534 TMC5 - transmembrane channel like 5 protein-coding chr11-369 chr11 117226671 117226903 + 14.5 0.000 intron (NM_004716, intron 5 of 16) intron (NM_004716, intron 5 of 16) 5286 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr10-506 chr10 124734642 124734874 + 14.5 0.000 intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 9620 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr22-372 chr22 27128594 27128826 + 14.5 0.000 Intergenic MER45A|DNA|hAT-Tip100 -58806 NM_001318392 105372977 Hs.743180 NM_001318392 LOC105372977 - uncharacterized LOC105372977 protein-coding chr7-687 chr7 30751852 30752084 + 14.5 0.000 promoter-TSS (NM_001199219) promoter-TSS (NM_001199219) -167 NM_006774 11185 Hs.632629 NM_006774 ENSG00000241644 INMT TEMT indolethylamine N-methyltransferase protein-coding chrX-46 chrX 139887911 139888143 + 14.5 0.000 intron (NM_001353812, intron 1 of 29) L1M4|LINE|L1 36204 NR_030230 574508 NR_030230 ENSG00000207633 MIR505 MIRN505|hsa-mir-505|mir-505 microRNA 505 ncRNA chr13-111 chr13 24165709 24165941 + 14.5 0.000 intron (NM_153023, intron 1 of 11) intron (NM_153023, intron 1 of 11) 3409 NR_031753 100313842 NR_031753 ENSG00000252695 MIR2276 - microRNA 2276 ncRNA chr7-796 chr7 102432078 102432310 + 14.5 0.000 Intergenic Intergenic -1336 NM_001271818 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr7-465 chr7 24774655 24774887 + 14.5 0.000 Intergenic AluSg|SINE|Alu -16832 NM_001127454 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr11-862 chr11 65937811 65938043 + 14.5 0.000 Intergenic LTR47B2|LTR|ERVL -7717 NM_152762 254187 Hs.350671 NM_152762 ENSG00000175513 TSGA10IP FAM161C testis specific 10 interacting protein protein-coding chr10-266 chr10 115956910 115957142 + 14.5 0.000 Intergenic Intergenic 237763 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr2-942 chr2 47057267 47057499 + 14.5 0.000 intron (NM_001288951, intron 19 of 20) intron (NM_001288951, intron 19 of 20) 97925 NM_173649 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr7-804 chr7 110835622 110835854 + 14.5 0.000 intron (NM_001350963, intron 5 of 5) intron (NM_001350963, intron 5 of 5) -255268 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr8-365 chr8 142750454 142750686 + 14.5 0.000 intron (NM_205545, intron 2 of 2) intron (NM_205545, intron 2 of 2) 1962 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr11-732 chr11 117561373 117561605 + 14.5 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 233635 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chrX-260 chrX 101573837 101574069 + 14.5 0.000 Intergenic L1M3e|LINE|L1 23406 NM_016608 51309 Hs.9728 NM_016608 ENSG00000126947 ARMCX1 ALEX1|GASP7 armadillo repeat containing X-linked 1 protein-coding chr16-662 chr16 74768949 74769181 + 14.5 0.000 intron (NM_024306, intron 1 of 6) intron (NM_024306, intron 1 of 6) 5755 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr8-423 chr8 137417658 137417890 + 14.5 0.000 Intergenic THE1B|LTR|ERVL-MaLR -4186 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA chr10-746 chr10 93813810 93814042 + 14.5 0.000 Intergenic Intergenic 55990 NM_005097 9211 Hs.533670 NM_005097 ENSG00000108231 LGI1 ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099 leucine rich glioma inactivated 1 protein-coding chr4-498 chr4 3248902 3249134 + 14.5 0.000 promoter-TSS (NM_001042690) promoter-TSS (NM_001042690) -141 NM_001042690 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr8-297 chr8 27673731 27673963 + 14.5 0.000 TTS (NM_016240) TTS (NM_016240) -27830 NR_037417 100500858 NR_037417 ENSG00000284351 MIR3622A mir-3622a microRNA 3622a ncRNA chr6-620 chr6 148708326 148708558 + 14.5 0.000 Intergenic MIR|SINE|MIR -38588 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr6-339 chr6 42781966 42782198 + 14.5 0.000 5' UTR (NM_001318819, exon 2 of 14) 5' UTR (NM_001318819, exon 2 of 14) -1414 NR_134654 401261 Hs.656652 NM_001004322 LOC401261 - uncharacterized LOC401261 ncRNA chr9-197 chr9 129573158 129573390 + 14.5 0.000 Intergenic AluSx|SINE|Alu -35610 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr6-430 chr6 36493049 36493281 + 14.5 0.000 TTS (NM_001305102) TTS (NM_001305102) 50165 NM_173562 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr9-588 chr9 27282511 27282743 + 14.5 0.000 non-coding (NR_026679, exon 1 of 17) non-coding (NR_026679, exon 1 of 17) 166 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA chr3-635 chr3 57179783 57180015 + 14.5 0.000 Intergenic LTR41|LTR|ERVL -9582 NM_001318864 54756 Hs.150725 NM_017563 ENSG00000144730 IL17RD HH18|IL-17RD|IL17RLM|SEF interleukin 17 receptor D protein-coding chr1-755 chr1 48689108 48689340 + 14.5 0.000 intron (NM_001323575, intron 6 of 12) AluSx|SINE|Alu 87667 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr14-269 chr14 31207492 31207724 + 14.5 0.000 5' UTR (NM_015382, exon 1 of 43) 5' UTR (NM_015382, exon 1 of 43) 185 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr8-611 chr8 144053135 144053367 + 14.5 0.000 exon (NM_017570, exon 20 of 27) exon (NM_017570, exon 20 of 27) 3853 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr1-1613 chr1 241096976 241097208 + 14.5 0.000 intron (NM_001350116, intron 3 of 16) intron (NM_001350116, intron 3 of 16) -35180 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr11-555 chr11 17786997 17787229 + 14.5 0.000 TTS (NR_104041) TTS (NR_104041) 51165 NM_001112741 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr7-836 chr7 131508025 131508257 + 14.5 0.000 intron (NM_001018111, intron 5 of 8) intron (NM_001018111, intron 5 of 8) 48487 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr11-742 chr11 123430940 123431172 + 14.5 0.000 exon (NM_001367421, exon 2 of 21) exon (NM_001367421, exon 2 of 21) 787 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr7-732 chr7 55239054 55239286 + 14.5 0.000 intron (NR_110426, intron 2 of 3) intron (NR_110426, intron 2 of 3) 16465 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr17-445 chr17 80035918 80036150 + 14.5 0.000 promoter-TSS (NM_019020) promoter-TSS (NM_019020) -162 NM_019020 125058 Hs.369819 NM_019020 ENSG00000167291 TBC1D16 - TBC1 domain family member 16 protein-coding chr2-999 chr2 101474936 101475168 + 14.5 0.000 promoter-TSS (NM_001145664) promoter-TSS (NM_001145664) 60 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr9-251 chr9 33163155 33163387 + 14.5 0.000 intron (NM_001497, intron 1 of 5) intron (NM_001497, intron 1 of 5) -3677 NR_108109 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA chr2-1157 chr2 239597445 239597677 + 14.5 0.000 Intergenic MSTB|LTR|ERVL-MaLR -165299 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chrX-265 chrX 109744982 109745214 + 14.5 0.000 Intergenic L2a|LINE|L2 -11706 NM_022977 2182 Hs.268785 NM_004458 ENSG00000068366 ACSL4 ACS4|FACL4|LACS4|MRX63|MRX68 acyl-CoA synthetase long chain family member 4 protein-coding chr22-157 chr22 24259440 24259672 + 14.5 0.000 intron (NR_003714, intron 4 of 6) intron (NR_003714, intron 4 of 6) 7935 NR_003714 29774 Hs.534980 NM_014549 ENSG00000128262 POM121L9P DKFZP434P211|UNQ2565 POM121 transmembrane nucleoporin like 9, pseudogene pseudo chr14-298 chr14 68885396 68885628 + 14.5 0.000 exon (NM_001130004, exon 12 of 22) exon (NM_001130004, exon 12 of 22) -89269 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr12-489 chr12 3224486 3224718 + 14.5 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 141520 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chrX-212 chrX 30713011 30713243 + 14.5 0.000 intron (NM_001128127, intron 12 of 19) intron (NM_001128127, intron 12 of 19) 59768 NM_001128127 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr1-1521 chr1 184686566 184686798 + 14.5 0.000 Intergenic Charlie15a|DNA|hAT-Charlie 68176 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr22-264 chr22 20726208 20726440 + 14.5 0.000 intron (NM_058004, intron 42 of 54) intron (NM_058004, intron 42 of 54) 25210 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr22-396 chr22 37681048 37681280 + 14.5 0.000 Intergenic Intergenic -5179 NM_024313 79159 Hs.632778 NM_024313 ENSG00000273899 NOL12 Nop25|dJ37E16.7 nucleolar protein 12 protein-coding chr6-419 chr6 11616266 11616498 + 14.5 0.000 Intergenic Intergenic 78633 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr8-521 chr8 85998684 85998916 + 14.5 0.000 Intergenic Intergenic 70868 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr1-1070 chr1 6507859 6508091 + 14.5 0.000 intron (NM_198681, intron 1 of 21) intron (NM_198681, intron 1 of 21) -10531 NM_001042663 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr16-446 chr16 66698051 66698283 + 14.5 0.000 Intergenic AluSz|SINE|Alu -1424 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr19-456 chr19 1685088 1685320 + 14.5 0.000 Intergenic Intergenic -32589 NM_001351779 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr15-453 chr15 84824278 84824510 + 14.5 0.000 intron (NM_020778, intron 2 of 13) intron (NM_020778, intron 2 of 13) 7714 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chr2-864 chr2 240889638 240889870 + 14.3 0.000 intron (NM_024861, intron 3 of 4) intron (NM_024861, intron 3 of 4) 2281 NM_001282921 79919 Hs.193745 NM_024861 ENSG00000172478 MAB21L4 C2orf54 mab-21 like 4 protein-coding chr17-661 chr17 61970503 61970735 + 14.3 0.000 intron (NM_005121, intron 17 of 29) AluSz6|SINE|Alu -42637 NM_020748 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding chr1-397 chr1 6757285 6757517 + 14.3 0.000 Intergenic AluSg|SINE|Alu 27579 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr5-702 chr5 141651342 141651574 + 14.3 0.000 promoter-TSS (NM_033449) promoter-TSS (NM_033449) -40 NM_033449 89848 Hs.591257 NM_033449 ENSG00000197948 FCHSD1 NWK2 FCH and double SH3 domains 1 protein-coding chr6-519 chr6 25890513 25890745 + 14.3 0.000 Intergenic MLT1I-int|LTR|ERVL-MaLR -16386 NM_006632 10786 Hs.327179 NM_006632 ENSG00000124564 SLC17A3 GOUT4|NPT4|UAQTL4 solute carrier family 17 member 3 protein-coding chr7-625 chr7 151010047 151010279 + 14.3 0.000 exon (NM_000603, exon 21 of 27) exon (NM_000603, exon 21 of 27) 14336 NM_001317056 285973 Hs.707300 NM_173681 ENSG00000181652 ATG9B APG9L2|NOS3AS|SONE autophagy related 9B protein-coding chr3-830 chr3 121622545 121622777 + 14.3 0.000 exon (NM_016298, exon 3 of 4) exon (NM_016298, exon 3 of 4) 29282 NM_016298 51725 Hs.272564 NM_016298 ENSG00000163833 FBXO40 FBX40 F-box protein 40 protein-coding chr11-415 chr11 5545301 5545533 + 14.3 0.000 exon (NM_001005289, exon 1 of 1) exon (NM_001005289, exon 1 of 1) 106 NM_001005289 390067 Hs.554540 NM_001005289 ENSG00000181616 OR52H1 OR11-41|OR11-45 olfactory receptor family 52 subfamily H member 1 protein-coding chr7-845 chr7 135603403 135603635 + 14.3 0.000 intron (NM_015135, intron 18 of 42) AluSz|SINE|Alu 45602 NM_001329434 23165 Hs.743250 NM_015135 ENSG00000155561 NUP205 C7orf14|NPHS13 nucleoporin 205 protein-coding chr11-778 chr11 9137882 9138114 + 14.3 0.000 TTS (NM_015213) TTS (NM_015213) 43635 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo chr10-382 chr10 69801848 69802080 + 14.3 0.000 promoter-TSS (NM_001130103) promoter-TSS (NM_001130103) 58 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr1-622 chr1 30809441 30809673 + 14.3 0.000 Intergenic Intergenic -15095 NR_146732 105378622 Hs.209284 NR_146732 ENSG00000223382 LINC01778 - long intergenic non-protein coding RNA 1778 ncRNA KI270757.1-2 KI270757.1 14983 15215 + 14.3 0.000 NA NA NA NA chrX-274 chrX 120380118 120380350 + 14.3 0.000 3' UTR (NM_001142447, exon 8 of 8) 3' UTR (NM_001142447, exon 8 of 8) 18145 NM_012069 23439 Hs.292599 NM_012069 ENSG00000101892 ATP1B4 - ATPase Na+/K+ transporting family member beta 4 protein-coding chr2-855 chr2 228279789 228280021 + 14.3 0.000 Intergenic AluJr|SINE|Alu -98218 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding chr8-291 chr8 22694653 22694885 + 14.3 0.000 Intergenic CpG-27074 -1289 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr3-896 chr3 171460853 171461085 + 14.3 0.000 promoter-TSS (NM_001161562) promoter-TSS (NM_001161562) -561 NR_027767 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr10-110 chr10 86429398 86429630 + 14.3 0.000 Intergenic L1ME2|LINE|L1 -62719 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr14-310 chr14 84613243 84613475 + 14.3 0.000 Intergenic Intergenic -658573 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chrX-206 chrX 23786593 23786825 + 14.3 0.000 TTS (NM_002970) TTS (NM_002970) 3551 NR_027783 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr19-505 chr19 56132399 56132631 + 14.3 0.000 Intergenic Intergenic -8772 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr10-802 chr10 119896541 119896773 + 14.3 0.000 intron (NR_037771, intron 1 of 17) intron (NR_037771, intron 1 of 17) 3927 NM_007190 11196 Hs.435004 NM_007190 ENSG00000107651 SEC23IP MSTP053|P125|P125A SEC23 interacting protein protein-coding chr7-839 chr7 133984172 133984404 + 14.3 0.000 intron (NM_021807, intron 14 of 17) intron (NM_021807, intron 14 of 17) -143052 NM_144648 136332 Hs.149774 NM_144648 ENSG00000155530 LRGUK CFAP246 leucine rich repeats and guanylate kinase domain containing protein-coding chr17-719 chr17 5282114 5282346 + 14.3 0.000 promoter-TSS (NM_004703) promoter-TSS (NM_004703) -54 NM_004703 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr1-1242 chr1 9947129 9947361 + 14.3 0.000 intron (NM_001297779, intron 1 of 4) AluJr|SINE|Alu 3770 NM_001297779 64802 Hs.633762 NM_022787 ENSG00000173614 NMNAT1 LCA9|NMNAT|PNAT1 nicotinamide nucleotide adenylyltransferase 1 protein-coding chr1-903 chr1 39955663 39955895 + 14.3 0.000 intron (NM_001287808, intron 1 of 11) intron (NM_001287808, intron 1 of 11) 634 NM_001349823 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr16-697 chr16 85312961 85313193 + 14.3 0.000 Intergenic Intergenic -6752 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr2-872 chr2 1730587 1730819 + 14.3 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 13812 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr16-512 chr16 50981703 50981935 + 14.3 0.000 intron (NR_039672, intron 2 of 6) intron (NR_039672, intron 2 of 6) -35939 NR_110913 101927334 Hs.555184 NR_110913 ENSG00000261637 LINC02127 - long intergenic non-protein coding RNA 2127 ncRNA KI270751.1-1 KI270751.1 149659 149891 + 14.3 0.000 NA NA NA NA chr10-691 chr10 71808415 71808647 + 14.3 0.000 intron (NM_001171934, intron 13 of 21) intron (NM_001171934, intron 13 of 21) -3352 NM_001171936 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr9-656 chr9 114114175 114114407 + 14.3 0.000 Intergenic THE1D|LTR|ERVL-MaLR -15234 NM_138424 113220 Hs.28149 NM_138424 ENSG00000136883 KIF12 - kinesin family member 12 protein-coding chr1-950 chr1 98044464 98044696 + 14.3 0.000 TTS (NR_039604) TTS (NR_039604) 771 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr8-392 chr8 41196527 41196759 + 14.3 0.000 Intergenic Intergenic 74500 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr4-641 chr4 144645412 144645644 + 14.3 0.000 promoter-TSS (NM_022475) promoter-TSS (NM_022475) 491 NR_037595 646576 Hs.632595 NR_037595 ENSG00000248890 HHIP-AS1 - HHIP antisense RNA 1 ncRNA chr4-590 chr4 95548180 95548412 + 14.3 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 677 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr1-1391 chr1 85135181 85135413 + 14.3 0.000 Intergenic AluJo|SINE|Alu 1503 NR_039619 100616481 NR_039619 ENSG00000266110 MIR4423 mir-4423 microRNA 4423 ncRNA chr11-578 chr11 59171487 59171719 + 14.3 0.000 promoter-TSS (NM_015177) promoter-TSS (NM_015177) 173 NM_001300727 23220 Hs.523696 NM_015177 ENSG00000110042 DTX4 RNF155 deltex E3 ubiquitin ligase 4 protein-coding chr10-474 chr10 92239511 92239743 + 14.3 0.000 exon (NM_014912, exon 2 of 10) exon (NM_014912, exon 2 of 10) 3652 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr10-828 chr10 132040184 132040416 + 14.3 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -25646 NM_001323090 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr3-825 chr3 118619504 118619736 + 14.3 0.000 intron (NR_135547, intron 2 of 3) (AT)n|Simple_repeat|Simple_repeat -22148 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA chr11-669 chr11 8165579 8165811 + 14.3 0.000 intron (NM_001346692, intron 1 of 6) L1MB8|LINE|L1 3330 NR_144485 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr1-1301 chr1 27636758 27636990 + 14.3 0.000 Intergenic Intergenic -1689 NM_005248 2268 Hs.1422 NM_005248 ENSG00000000938 FGR SRC2|c-fgr|c-src2|p55-Fgr|p55c-fgr|p58-Fgr|p58c-fgr FGR proto-oncogene, Src family tyrosine kinase protein-coding chr16-704 chr16 87203135 87203367 + 14.3 0.000 Intergenic L1MD2|LINE|L1 -8864 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr10-814 chr10 125065195 125065427 + 14.3 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -32441 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr19-381 chr19 8515976 8516208 + 14.3 0.000 Intergenic Intergenic -1925 NM_001146175 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr1-1287 chr1 24742300 24742532 + 14.3 0.000 Intergenic Intergenic -3031 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr1-1072 chr1 8481906 8482138 + 14.3 0.000 intron (NM_001042681, intron 10 of 22) intron (NM_001042681, intron 10 of 22) 12891 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr17-814 chr17 58331298 58331530 + 14.3 0.000 promoter-TSS (NR_029683) promoter-TSS (NR_029683) -96 NR_029683 406934 NR_029683 ENSG00000284353 MIR142 MIRN142|mir-142 microRNA 142 ncRNA chr2-475 chr2 113240861 113241093 + 14.3 0.000 TTS (NR_047570) TTS (NR_047570) 4708 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr2-907 chr2 31644336 31644568 + 14.3 0.000 Intergenic MER1B|DNA|hAT-Charlie -63514 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding chr5-325 chr5 33120840 33121072 + 14.3 0.000 Intergenic Intergenic -108779 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr15-291 chr15 80333075 80333307 + 14.3 0.000 intron (NR_033833, intron 1 of 2) intron (NR_033833, intron 1 of 2) 8614 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA chr3-396 chr3 167545005 167545237 + 14.3 0.000 intron (NM_001348951, intron 10 of 18) L1PB1|LINE|L1 -70989 NM_006217 5276 Hs.445555 NM_006217 ENSG00000114204 SERPINI2 MEPI|PANCPIN|PI14|TSA2004 serpin family I member 2 protein-coding chr7-318 chr7 23106199 23106431 + 14.3 0.000 promoter-TSS (NM_018846) promoter-TSS (NM_018846) -346 NM_018846 55975 Hs.654817 NM_018846 ENSG00000122550 KLHL7 CISS3|KLHL6|SBBI26 kelch like family member 7 protein-coding chr1-1415 chr1 107052672 107052904 + 14.3 0.000 Intergenic L2c|LINE|L2 -3886 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr11-957 chr11 117472049 117472281 + 14.3 0.000 intron (NM_020693, intron 14 of 32) intron (NM_020693, intron 14 of 32) 144311 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding chr21-150 chr21 39051702 39051934 + 14.3 0.000 Intergenic Intergenic -74044 NR_109962 101928435 Hs.385528 NR_109962 ENSG00000232837 LINC01700 - long intergenic non-protein coding RNA 1700 ncRNA chr18-210 chr18 34563014 34563246 + 14.3 0.000 intron (NM_001198945, intron 1 of 10) MLT1C|LTR|ERVL-MaLR -30205 NM_001198939 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr17-268 chr17 17807960 17808192 + 14.3 0.000 intron (NM_030665, intron 4 of 5) intron (NM_030665, intron 4 of 5) 5469 NR_106835 102465466 NR_106835 ENSG00000274111 MIR6777 hsa-mir-6777 microRNA 6777 ncRNA chr3-790 chr3 66798320 66798552 + 14.3 0.000 Intergenic Intergenic -60100 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chrX-72 chrX 48696568 48696800 + 14.3 0.000 promoter-TSS (NM_003173) promoter-TSS (NM_003173) -50 NM_003173 6839 Hs.522639 NM_003173 ENSG00000101945 SUV39H1 H3-K9-HMTase 1|KMT1A|MG44|SUV39H suppressor of variegation 3-9 homolog 1 protein-coding chr3-866 chr3 151085404 151085636 + 14.3 0.000 Intergenic CpG -1278 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr3-915 chr3 187027718 187027950 + 14.3 0.000 intron (NM_003032, intron 1 of 6) L2|LINE|L2 5979 NM_003032 6480 Hs.207459 NM_003032 ENSG00000073849 ST6GAL1 SIAT1|ST6GalI|ST6N ST6 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding chr7-576 chr7 27487785 27488017 + 14.3 0.000 Intergenic Intergenic -128073 NR_122122 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr6-639 chr6 159875909 159876141 + 14.3 0.000 Intergenic Intergenic -14963 NM_002377 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr2-404 chr2 201768955 201769187 + 14.3 0.000 intron (NM_020919, intron 1 of 33) intron (NM_020919, intron 1 of 33) 11862 NM_001135745 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr15-381 chr15 45378363 45378595 + 14.3 0.000 promoter-TSS (NM_001482) promoter-TSS (NM_001482) 65 NM_001482 2628 Hs.75335 NM_001482 ENSG00000171766 GATM AGAT|AT|CCDS3 glycine amidinotransferase protein-coding chr12-563 chr12 780610 780842 + 14.3 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 27803 NM_213655 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr16-689 chr16 84661745 84661977 + 14.3 0.000 exon (NM_024731, exon 5 of 5) exon (NM_024731, exon 5 of 5) 13350 NM_001303451 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding chr6-397 chr6 151470924 151471156 + 14.3 0.000 TTS (NM_001286562) TTS (NM_001286562) 18574 NM_024573 79624 Hs.15929 NM_024573 ENSG00000146476 ARMT1 C6orf211 acidic residue methyltransferase 1 protein-coding chr8-251 chr8 22534314 22534546 + 14.3 0.000 intron (NM_001243975, intron 12 of 12) AluJr|SINE|Alu -17497 NM_005775 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr2-811 chr2 128244301 128244533 + 14.3 0.000 Intergenic L1MC1|LINE|L1 74451 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr11-705 chr11 66864828 66865060 + 14.3 0.000 intron (NM_022172, intron 9 of 20) intron (NM_022172, intron 9 of 20) 7880 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr2-994 chr2 97999444 97999676 + 14.3 0.000 Intergenic L2|LINE|L2 -3612 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr3-97 chr3 12877649 12877881 + 14.3 0.000 intron (NR_136189, intron 2 of 2) intron (NR_136189, intron 2 of 2) 7446 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr12-511 chr12 50085560 50085792 + 14.3 0.000 intron (NM_139071, intron 1 of 11) intron (NM_139071, intron 1 of 11) 334 NM_003076 6602 Hs.79335 NM_003076 ENSG00000066117 SMARCD1 BAF60A|CRACD1|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding KI270711.1-1 KI270711.1 8279 8511 + 14.3 0.000 NA NA NA NA chr8-479 chr8 37538862 37539094 + 14.3 0.000 Intergenic Intergenic -17592 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr13-337 chr13 102361909 102362141 + 14.3 0.000 intron (NM_001321941, intron 1 of 5) intron (NM_001321941, intron 1 of 5) -5505 NR_125912 100874081 Hs.569296 NR_125912 ENSG00000234445 FGF14-AS1 - FGF14 antisense RNA 1 ncRNA chr7-646 chr7 2451429 2451661 + 14.3 0.000 Intergenic Intergenic 24838 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding KI270435.1-1 KI270435.1 91951 92183 + 14.3 0.000 NA NA NA NA chr16-472 chr16 85946176 85946408 + 14.3 0.000 Intergenic L2|LINE|L2 27945 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr3-474 chr3 12800188 12800420 + 14.3 0.000 intron (NM_001162499, intron 1 of 14) intron (NM_001162499, intron 1 of 14) 3624 NM_001162499 23066 Hs.343664 NM_012298 ENSG00000144712 CAND2 TIP120B|Tp120b cullin associated and neddylation dissociated 2 (putative) protein-coding chr21-155 chr21 42818341 42818573 + 14.3 0.000 Intergenic Intergenic -38463 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr17-721 chr17 6558950 6559182 + 14.3 0.000 Intergenic Intergenic -2511 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr9-714 chr9 133153304 133153536 + 14.3 0.000 3' UTR (NM_001288573, exon 7 of 7) 3' UTR (NM_001288573, exon 7 of 7) -4210 NM_001042368 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr7-813 chr7 119219444 119219676 + 14.3 0.000 Intergenic L1M3e|LINE|L1 687815 NR_131960 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA chr9-567 chr9 4855957 4856189 + 14.1 0.000 intron (NM_005772, intron 8 of 8) intron (NM_005772, intron 8 of 8) 5776 NR_029836 406894 NR_029836 ENSG00000199065 MIR101-2 MIRN101-2|mir-101-2 microRNA 101-2 ncRNA chr10-774 chr10 103301866 103302098 + 14.1 0.000 TTS (NM_032154) TTS (NM_032154) 24844 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr9-758 chr9 137801041 137801273 + 14.1 0.000 intron (NM_001354263, intron 18 of 26) intron (NM_001354263, intron 18 of 26) -12751 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr4-331 chr4 11698971 11699203 + 14.1 0.000 Intergenic Intergenic 70381 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA chr2-1144 chr2 234335602 234335834 + 14.1 0.000 Intergenic Intergenic 118877 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr1-737 chr1 27106888 27107120 + 14.1 0.000 intron (NR_046474, intron 3 of 10) intron (NR_046474, intron 3 of 10) 48121 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr7-724 chr7 51224963 51225195 + 14.1 0.000 intron (NM_015198, intron 1 of 12) intron (NM_015198, intron 1 of 12) 91730 NM_015198 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr12-592 chr12 23245050 23245282 + 14.1 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 69530 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr16-347 chr16 271163 271395 + 14.1 0.000 exon (NM_183337, exon 12 of 17) exon (NM_183337, exon 12 of 17) 4665 NM_003834 8786 Hs.65756 NM_003834 ENSG00000076344 RGS11 RS11 regulator of G protein signaling 11 protein-coding chr22-350 chr22 43145683 43145915 + 14.1 0.000 Intergenic AluJr|SINE|Alu -2401 NM_173467 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr11-965 chr11 119188278 119188510 + 14.1 0.000 non-coding (NR_033122, exon 8 of 11) non-coding (NR_033122, exon 8 of 11) 2247 NR_145809 109623467 NR_145809 SNORD150 - small nucleolar RNA, C/D box 150 snoRNA chr3-523 chr3 94490818 94491050 + 14.1 0.000 Intergenic AluSz|SINE|Alu 427873 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr9-264 chr9 130388388 130388620 + 14.1 0.000 exon (NM_001291815, exon 62 of 98) exon (NM_001291815, exon 62 of 98) -56203 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr1-1107 chr1 44734996 44735228 + 14.1 0.000 Intergenic Intergenic -3944 NR_002755 26830 NR_002755 ENSG00000200169 RNU5D-1 RNU5D|U5DL|U5DS RNA, U5D small nuclear 1 snRNA chr1-809 chr1 229774071 229774303 + 14.1 0.000 Intergenic L1PB4|LINE|L1 111631 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA chr1-1161 chr1 156898216 156898448 + 14.1 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 4601 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr16-188 chr16 31215404 31215636 + 14.1 0.000 TTS (NM_152901) TTS (NM_152901) 1401 NM_001008274 493829 Hs.661859 NM_001008274 ENSG00000177238 TRIM72 MG53 tripartite motif containing 72 protein-coding chr11-329 chr11 131538760 131538992 + 14.1 0.000 intron (NR_110140, intron 4 of 7) L1MA7|LINE|L1 1991 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr1-1304 chr1 27911092 27911324 + 14.1 0.000 intron (NM_001355128, intron 1 of 7) AluSx|SINE|Alu 3367 NM_002946 6118 Hs.79411 NM_002946 ENSG00000117748 RPA2 REPA2|RP-A p32|RP-A p34|RPA32 replication protein A2 protein-coding chr12-617 chr12 46589386 46589618 + 14.1 0.000 intron (NR_125377, intron 3 of 3) L1PA8|LINE|L1 205395 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA chr12-686 chr12 93898178 93898410 + 14.1 0.000 intron (NR_135017, intron 2 of 2) LTR39|LTR|ERV1 45312 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr6-509 chr6 18742482 18742714 + 14.1 0.000 Intergenic Intergenic 170814 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr9-179 chr9 35116331 35116563 + 14.1 0.000 promoter-TSS (NR_134455) promoter-TSS (NR_134455) -585 NM_025182 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr10-771 chr10 102872221 102872453 + 14.1 0.000 intron (NM_020682, intron 3 of 10) GA-rich|Low_complexity|Low_complexity 2867 NM_020682 57412 Hs.720370 NM_020682 ENSG00000214435 AS3MT CYT19 arsenite methyltransferase protein-coding chr6-145 chr6 21867277 21867509 + 14.1 0.000 intron (NR_015410, intron 4 of 11) AluSq2|SINE|Alu 200980 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr7-619 chr7 131094755 131094987 + 14.1 0.000 intron (NR_109850, intron 2 of 5) MER1A|DNA|hAT-Charlie 12159 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr15-361 chr15 39597971 39598203 + 14.1 0.000 3' UTR (NM_003246, exon 22 of 22) 3' UTR (NM_003246, exon 22 of 22) 17008 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr11-324 chr11 114050142 114050374 + 14.1 0.000 Intergenic Intergenic -9453 NM_006006 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding chr18-148 chr18 13136706 13136938 + 14.1 0.000 Intergenic CpG -81938 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr20-358 chr20 40885701 40885933 + 14.1 0.000 Intergenic L2b|LINE|L2 -94896 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr3-494 chr3 46841715 46841947 + 14.1 0.000 Intergenic L1M4a2|LINE|L1 -7736 NR_160554 339906 Hs.585127 NM_182702 ENSG00000178055 PRSS42P PRSS42|TESSP2 serine protease 42, pseudogene pseudo chr4-472 chr4 181369081 181369313 + 14.1 0.000 Intergenic AluY|SINE|Alu -104168 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr18-126 chr18 28893197 28893429 + 14.1 0.000 Intergenic Intergenic -716183 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-600 chr19 16663586 16663818 + 14.1 0.000 intron (NM_024074, intron 1 of 5) AluY|SINE|Alu 2563 NM_024074 79041 Hs.436068 NM_024074 ENSG00000072954 TMEM38A TRIC-A|TRICA transmembrane protein 38A protein-coding chr8-351 chr8 124538482 124538714 + 14.1 0.000 promoter-TSS (NM_005005) promoter-TSS (NM_005005) 487 NM_032026 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr8-333 chr8 98382531 98382763 + 14.1 0.000 Intergenic Intergenic 11091 NR_162095 113218497 NR_162095 MIR9903 - microRNA 9903 ncRNA chr11-726 chr11 114218211 114218443 + 14.1 0.000 intron (NM_006006, intron 4 of 6) intron (NM_006006, intron 4 of 6) -77486 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr10-441 chr10 48306455 48306687 + 14.1 0.000 promoter-TSS (NR_136585) promoter-TSS (NR_136585) -68 NM_001278547 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding chr11-821 chr11 45868397 45868629 + 14.1 0.000 intron (NM_001127457, intron 6 of 11) AluJr4|SINE|Alu -17138 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr9-438 chr9 95093737 95093969 + 14.1 0.000 Intergenic MIR|SINE|MIR -7759 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr5-591 chr5 36357622 36357854 + 14.1 0.000 Intergenic Intergenic -55836 NM_001323274 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr11-761 chr11 1347791 1348023 + 14.1 0.000 Intergenic AluSx1|SINE|Alu 38199 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr16-563 chr16 2235964 2236196 + 14.1 0.000 promoter-TSS (NM_001301680) promoter-TSS (NM_001301680) -364 NM_001374 1775 Hs.103503 NM_001374 ENSG00000167968 DNASE1L2 DNAS1L2 deoxyribonuclease 1 like 2 protein-coding chr6-604 chr6 138493538 138493770 + 14.1 0.000 intron (NM_020464, intron 2 of 6) X6A_LINE|LINE|CR1 5840 NM_001144060 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr3-522 chr3 89114727 89114959 + 14.1 0.000 intron (NM_182644, intron 1 of 6) CpG 7222 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr17-511 chr17 5439138 5439370 + 14.1 0.000 promoter-TSS (NM_001212) promoter-TSS (NM_001212) -99 NM_001212 708 Hs.555866 NM_001212 ENSG00000108561 C1QBP COXPD33|GC1QBP|HABP1|SF2AP32|SF2p32|gC1Q-R|gC1qR|p32 complement C1q binding protein protein-coding chr7-173 chr7 100720045 100720277 + 14.1 0.000 promoter-TSS (NM_000799) promoter-TSS (NM_000799) -307 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr19-856 chr19 47705477 47705709 + 14.1 0.000 Intergenic L2a|LINE|L2 -7829 NM_014601 30846 Hs.744963 NM_014601 ENSG00000024422 EHD2 PAST2 EH domain containing 2 protein-coding chr1-826 chr1 2405913 2406145 + 14.1 0.000 TTS (NM_007033) TTS (NM_007033) 6542 NM_153818 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr12-726 chr12 117685585 117685817 + 14.1 0.000 intron (NM_173598, intron 4 of 19) intron (NM_173598, intron 4 of 19) 283289 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr3-414 chr3 194807175 194807407 + 14.1 0.000 Intergenic Intergenic -38582 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr2-212 chr2 89828535 89828767 + 14.1 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -190744 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr6-312 chr6 958562 958794 + 14.1 0.000 Intergenic Intergenic 90180 NR_110853 101927691 Hs.552556 NR_110853 LOC101927691 - uncharacterized LOC101927691 ncRNA chr17-625 chr17 14415108 14415340 + 14.1 0.000 Intergenic Intergenic 111484 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr11-378 chr11 9091295 9091527 + 14.1 0.000 exon (NM_001330199, exon 1 of 22) exon (NM_001330199, exon 1 of 22) 188 NM_001330199 57758 Hs.523468 NM_020974 ENSG00000175356 SCUBE2 CEGB1|CEGF1|CEGP1|scube/You signal peptide, CUB domain and EGF like domain containing 2 protein-coding chr20-336 chr20 34994567 34994799 + 14.1 0.000 intron (NM_020884, intron 27 of 44) intron (NM_020884, intron 27 of 44) -4211 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr1-1561 chr1 207344224 207344456 + 14.1 0.000 intron (NM_001114752, intron 10 of 10) L1MA4A|LINE|L1 22662 NM_001300903 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding chr1-724 chr1 6735517 6735749 + 14.1 0.000 Intergenic AluY|SINE|Alu 8106 NR_104621 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chr19-567 chr19 3713125 3713357 + 14.1 0.000 intron (NM_001267560, intron 1 of 20) intron (NM_001267560, intron 1 of 20) 4857 NM_001267560 27134 Hs.25527 NM_014428 ENSG00000105289 TJP3 ZO-3|ZO3 tight junction protein 3 protein-coding chr7-733 chr7 55276235 55276467 + 14.1 0.000 Intergenic Intergenic -20716 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr3-386 chr3 136829975 136830207 + 14.1 0.000 intron (NM_025246, intron 1 of 1) L1MA2|LINE|L1 10965 NM_025246 80723 Hs.477692 NM_025246 ENSG00000168917 SLC35G2 TMEM22 solute carrier family 35 member G2 protein-coding chr7-396 chr7 131618462 131618694 + 14.1 0.000 Intergenic L2b|LINE|L2 -61950 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr14-442 chr14 81581436 81581668 + 14.1 0.000 Intergenic AluJb|SINE|Alu 41509 NR_110074 101928559 Hs.525499 NR_110074 ENSG00000258977 LINC01467 - long intergenic non-protein coding RNA 1467 ncRNA chr2-970 chr2 71852865 71853097 + 14.1 0.000 Intergenic Intergenic 294881 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding KI270729.1-4 KI270729.1 22407 22639 + 14.1 0.000 NA NA NA NA chr5-393 chr5 55355820 55356052 + 14.1 0.000 intron (NM_015360, intron 14 of 26) intron (NM_015360, intron 14 of 26) 47947 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr8-215 chr8 64678137 64678369 + 14.1 0.000 intron (NM_004820, intron 1 of 5) intron (NM_004820, intron 1 of 5) -96361 NR_152770 401463 Hs.651960 NR_015374 ENSG00000254102 LOC401463 - uncharacterized LOC401463 ncRNA chr6-277 chr6 51443522 51443754 + 14.1 0.000 Intergenic L1MA8|LINE|L1 -178232 NR_125840 101927082 Hs.730296 NR_125840 LOC101927082 - uncharacterized LOC101927082 ncRNA chr4-461 chr4 149135143 149135375 + 14.1 0.000 Intergenic AluJr|SINE|Alu -19036 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr5-280 chr5 87070090 87070322 + 14.1 0.000 Intergenic Intergenic 44748 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA chr1-987 chr1 156689474 156689706 + 14.1 0.000 Intergenic Intergenic -12183 NM_006617 10763 Hs.527971 NM_006617 ENSG00000132688 NES Nbla00170 nestin protein-coding chr5-483 chr5 178583536 178583768 + 14.1 0.000 intron (NM_173465, intron 1 of 28) MLT1K|LTR|ERVL-MaLR 6741 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding chr16-569 chr16 3610824 3611056 + 14.1 0.000 intron (NM_032444, intron 1 of 14) intron (NM_032444, intron 1 of 14) 666 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr16-592 chr16 28299722 28299954 + 14.1 0.000 intron (NM_001024401, intron 1 of 3) L2a|LINE|L2 7313 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr10-690 chr10 71399351 71399583 + 14.1 0.000 intron (NM_052836, intron 1 of 12) intron (NM_052836, intron 1 of 12) 2533 NM_001171932 64072 Hs.656032 NM_022124 ENSG00000107736 CDH23 CDHR23|PITA5|USH1D cadherin related 23 protein-coding chr14-243 chr14 102186922 102187154 + 14.1 0.000 intron (NM_001353659, intron 1 of 1) intron (NM_001353659, intron 1 of 1) 47141 NM_001353666 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr17-519 chr17 7916256 7916488 + 14.1 0.000 promoter-TSS (NR_152444) promoter-TSS (NR_152444) -54 NR_152444 284023 Hs.744470 NM_001358699 ENSG00000179859 RNF227 LINC02581 ring finger protein 227 protein-coding chr17-638 chr17 30433597 30433829 + 13.9 0.000 intron (NM_001304, intron 8 of 20) intron (NM_001304, intron 8 of 20) -43695 NM_001007025 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr9-555 chr9 133740077 133740309 + 13.9 0.000 promoter-TSS (NM_007101) promoter-TSS (NM_007101) -238 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr16-668 chr16 75463720 75463952 + 13.9 0.000 intron (NM_001304998, intron 1 of 2) intron (NM_001304998, intron 1 of 2) 607 NM_001304997 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr17-366 chr17 45148549 45148781 + 13.9 0.000 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 1348 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 HEXIM P-TEFb complex subunit 1 protein-coding chr11-255 chr11 78507380 78507612 + 13.9 0.000 intron (NM_024678, intron 6 of 13) L1M4c|LINE|L1 -25680 NR_120566 101928896 Hs.659055 NR_120566 ENSG00000255084 LOC101928896 - uncharacterized LOC101928896 ncRNA chr1-986 chr1 156501539 156501771 + 13.9 0.000 promoter-TSS (NM_005920) promoter-TSS (NM_005920) -880 NM_005920 4209 Hs.314327 NM_005920 ENSG00000116604 MEF2D - myocyte enhancer factor 2D protein-coding chr20-315 chr20 9708613 9708845 + 13.9 0.000 intron (NM_020341, intron 3 of 10) LTR16C|LTR|ERVL 130347 NM_177990 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding chr2-923 chr2 39706583 39706815 + 13.9 0.000 intron (NM_152390, intron 2 of 3) intron (NM_152390, intron 2 of 3) 40782 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding chr1-1625 chr1 246837121 246837353 + 13.9 0.000 Intergenic AluSg|SINE|Alu 47620 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr3-299 chr3 179653406 179653638 + 13.9 0.000 intron (NM_003940, intron 1 of 20) CpG 482 NM_003940 8975 Hs.175322 NM_003940 ENSG00000058056 USP13 ISOT3|IsoT-3 ubiquitin specific peptidase 13 protein-coding chr10-591 chr10 471003 471235 + 13.9 0.000 intron (NM_014974, intron 3 of 36) intron (NM_014974, intron 3 of 36) -157445 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr17-271 chr17 26884754 26884986 + 13.9 0.000 Intergenic ALR/Alpha|Satellite|centr 204371 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr1-1167 chr1 173411937 173412169 + 13.9 0.000 intron (NR_037845, intron 2 of 2) AluSx3|SINE|Alu 49309 NR_125960 101928673 Hs.674889 NR_125960 ENSG00000203739 LOC101928673 - uncharacterized LOC101928673 ncRNA chr8-391 chr8 38757525 38757757 + 13.9 0.000 intron (NM_001352804, intron 1 of 10) CpG 366 NM_001352804 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr17-537 chr17 24740191 24740423 + 13.9 0.000 Intergenic ALR/Alpha|Satellite|centr 2217196 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr16-443 chr16 64751961 64752193 + 13.9 0.000 Intergenic Intergenic 369986 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-582 chr5 27590606 27590838 + 13.9 0.000 Intergenic L1PA16|LINE|L1 118430 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr17-652 chr17 45210369 45210601 + 13.9 0.000 intron (NR_147507, intron 2 of 2) AluY|SINE|Alu 11280 NR_147507 339192 Hs.560498 NR_147507 ENSG00000267121 LOC339192 - uncharacterized LOC339192 ncRNA chr18-244 chr18 73762517 73762749 + 13.9 0.000 Intergenic Intergenic 385201 NM_001142958 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr9-548 chr9 130451169 130451401 + 13.9 0.000 intron (NM_000050, intron 2 of 15) intron (NM_000050, intron 2 of 15) 6324 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr8-577 chr8 129363223 129363455 + 13.9 0.000 intron (NR_130920, intron 3 of 3) L2c|LINE|L2 120803 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA chr10-416 chr10 3623904 3624136 + 13.9 0.000 intron (NR_131187, intron 1 of 1) intron (NR_131187, intron 1 of 1) -121182 NR_155746 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr1-1245 chr1 11051645 11051877 + 13.9 0.000 Intergenic LTR8|LTR|ERV1 -4522 NM_139208 10747 Hs.655645 NM_006610 ENSG00000009724 MASP2 MAP19|MASP-2|MASP1P1|sMAP mannan binding lectin serine peptidase 2 protein-coding chr6-448 chr6 98367491 98367723 + 13.9 0.000 Intergenic L2c|LINE|L2 343076 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr5-418 chr5 95759829 95760061 + 13.9 0.000 intron (NM_014899, intron 6 of 11) intron (NM_014899, intron 6 of 11) -27843 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr1-1369 chr1 63833828 63834060 + 13.9 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 59927 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr10-654 chr10 43078911 43079143 + 13.9 0.000 intron (NM_020630, intron 1 of 18) intron (NM_020630, intron 1 of 18) 1958 NM_020975 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr1-1476 chr1 158185429 158185661 + 13.9 0.000 TTS (NM_001319145) TTS (NM_001319145) 5598 NM_001319145 912 Hs.1799 NM_001766 ENSG00000158473 CD1D CD1A|R3|R3G1 CD1d molecule protein-coding chr6-243 chr6 136590432 136590664 + 13.9 0.000 intron (NM_005923, intron 23 of 29) AluY|SINE|Alu -38566 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr20-402 chr20 63859366 63859598 + 13.9 0.000 Intergenic Intergenic -1731 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr10-96 chr10 20854436 20854668 + 13.9 0.000 intron (NM_006393, intron 9 of 27) intron (NM_006393, intron 9 of 27) 43050 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding chr8-573 chr8 127061992 127062224 + 13.9 0.000 Intergenic MIRc|SINE|MIR -17766 NR_109833 101867536 Hs.652970 NR_109833 ENSG00000282961 PRNCR1 CARLo-3|PCAT8 prostate cancer associated non-coding RNA 1 ncRNA chr6-471 chr6 154932922 154933154 + 13.9 0.000 Intergenic Intergenic 79678 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr7-488 chr7 55073087 55073319 + 13.9 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -36636 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr1-1479 chr1 161041532 161041764 + 13.9 0.000 intron (NM_007122, intron 6 of 10) intron (NM_007122, intron 6 of 10) -2684 NM_001113206 100131187 Hs.720030 NM_001113205 ENSG00000215845 TSTD1 KAT|TST thiosulfate sulfurtransferase like domain containing 1 protein-coding chr1-1556 chr1 206073547 206073779 + 13.9 0.000 intron (NM_001007544, intron 1 of 5) intron (NM_001007544, intron 1 of 5) -9932 NM_001369490 440712 Hs.662248 NM_001007544 ENSG00000263961 RHEX C1orf186 regulator of hemoglobinization and erythroid cell expansion protein-coding KI270925.1-1 KI270925.1 276833 277065 + 13.9 0.000 NA NA NA NA chr4-502 chr4 4782048 4782280 + 13.9 0.000 intron (NR_125892, intron 2 of 2) MIRb|SINE|MIR 20404 NR_125892 101928279 Hs.586152 NR_125892 LOC101928279 - uncharacterized LOC101928279 ncRNA chr4-457 chr4 121069606 121069838 + 13.9 0.000 intron (NM_024574, intron 1 of 3) intron (NM_024574, intron 1 of 3) 2813 NM_024574 79625 Hs.709520 NM_024574 ENSG00000173376 NDNF C4orf31|NORD neuron derived neurotrophic factor protein-coding chr9-465 chr9 127613101 127613333 + 13.9 0.000 intron (NM_001032221, intron 1 of 18) CpG 940 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr17-548 chr17 35315436 35315668 + 13.9 0.000 Intergenic L1M7|LINE|L1 58069 NM_001104590 91607 Hs.745059 NM_152270 ENSG00000172716 SLFN11 SLFN8/9 schlafen family member 11 protein-coding chr2-1125 chr2 218985879 218986111 + 13.9 0.000 promoter-TSS (NM_017521) promoter-TSS (NM_017521) -338 NM_017521 54738 Hs.234759 NM_017521 ENSG00000163497 FEV HSRNAFEV|PET-1 FEV transcription factor, ETS family member protein-coding chrX-110 chrX 24465112 24465344 + 13.9 0.000 promoter-TSS (NM_005391) promoter-TSS (NM_005391) 1 NM_005391 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr1-1430 chr1 118482030 118482262 + 13.9 0.000 Intergenic L1PB1|LINE|L1 -296918 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr16-562 chr16 2207077 2207309 + 13.9 0.000 exon (NM_001199173, exon 6 of 9) exon (NM_001199173, exon 6 of 9) 1739 NM_022372 64223 Hs.29203 NM_022372 ENSG00000167965 MLST8 GBL|GbetaL|LST8|POP3|WAT1 MTOR associated protein, LST8 homolog protein-coding chr15-364 chr15 40899344 40899576 + 13.9 0.000 exon (NM_020857, exon 4 of 5) exon (NM_020857, exon 4 of 5) 5010 NM_020857 57617 Hs.23876 NM_020857 ENSG00000104142 VPS18 PEP3 VPS18 core subunit of CORVET and HOPS complexes protein-coding chr1-1189 chr1 220168327 220168559 + 13.9 0.000 intron (NM_012414, intron 24 of 34) AluSq2|SINE|Alu 32176 NR_031705 100302234 NR_031705 ENSG00000281696 MIR664A MIR664|MIRN664|hsa-mir-664|hsa-mir-664a|mir-664a microRNA 664a ncRNA chr18-236 chr18 60763276 60763508 + 13.9 0.000 Intergenic AluJr|SINE|Alu -390617 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr16-149 chr16 89387117 89387349 + 13.9 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -43685 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr4-344 chr4 52670182 52670414 + 13.9 0.000 Intergenic LTR47A|LTR|ERVL 10892 NR_125363 643783 Hs.631514 NR_125363 ENSG00000248866 USP46-AS1 - USP46 antisense RNA 1 ncRNA chr1-1573 chr1 218375074 218375306 + 13.9 0.000 intron (NR_138149, intron 2 of 7) intron (NR_138149, intron 2 of 7) -29512 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr10-789 chr10 111211823 111212055 + 13.9 0.000 Intergenic L1MC3|LINE|L1 97648 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr10-440 chr10 47285398 47285630 + 13.9 0.000 Intergenic Intergenic -14683 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr8-436 chr8 17284994 17285226 + 13.9 0.000 intron (NM_001363167, intron 10 of 11) intron (NM_001363167, intron 10 of 11) 38152 NM_001363170 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr12-510 chr12 49985982 49986214 + 13.9 0.000 Intergenic Intergenic 13151 NM_001652 363 Hs.54505 NM_001652 ENSG00000086159 AQP6 AQP2L|KID aquaporin 6 protein-coding chr17-672 chr17 75741777 75742009 + 13.9 0.000 intron (NM_001005619, intron 22 of 38) MIR|SINE|MIR 17197 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr3-609 chr3 22004955 22005187 + 13.9 0.000 Intergenic L1M2|LINE|L1 47932 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr10-787 chr10 110672227 110672459 + 13.9 0.000 intron (NM_001134363, intron 1 of 13) CpG 28007 NM_001134363 282996 Hs.116630 NM_001134363 ENSG00000203867 RBM20 - RNA binding motif protein 20 protein-coding chr1-1483 chr1 162388733 162388965 + 13.9 0.000 Intergenic Intergenic 7121 NM_001085375 400793 Hs.447011 NM_001085375 ENSG00000239887 C1orf226 - chromosome 1 open reading frame 226 protein-coding chr17-586 chr17 75919664 75919896 + 13.9 0.000 exon (NM_001319193, exon 19 of 29) exon (NM_001319193, exon 19 of 29) -14680 NM_032478 64978 Hs.442609 NM_032478 ENSG00000204316 MRPL38 HSPC262|L38MT|MRP-L3|MRP-L38|RPML3 mitochondrial ribosomal protein L38 protein-coding chr19-840 chr19 43578654 43578886 + 13.9 0.000 intron (NM_001193621, intron 3 of 5) intron (NM_001193621, intron 3 of 5) -1774 NM_001193622 390940 Hs.22049 NM_001193621 ENSG00000234465 PINLYP - phospholipase A2 inhibitor and LY6/PLAUR domain containing protein-coding chr2-814 chr2 138364676 138364908 + 13.9 0.000 Intergenic Intergenic -136978 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr4-627 chr4 132814693 132814925 + 13.9 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 223720 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr11-866 chr11 66182359 66182591 + 13.9 0.000 intron (NM_018026, intron 1 of 23) AluJo|SINE|Alu -74819 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chr18-193 chr18 12237236 12237468 + 13.9 0.000 Intergenic Intergenic -17009 NR_134607 1149 Hs.249129 NM_001279 ENSG00000176194 CIDEA CIDE-A cell death inducing DFFA like effector a protein-coding chr2-739 chr2 238100420 238100652 + 13.9 0.000 exon (NM_194312, exon 1 of 9) exon (NM_194312, exon 1 of 9) 196 NM_194312 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr4-253 chr4 84966335 84966567 + 13.9 0.000 promoter-TSS (NR_015359) promoter-TSS (NR_015359) 239 NM_014991 23001 Hs.480116 NM_014991 ENSG00000163625 WDFY3 ALFY|BCHS|MCPH18|ZFYVE25 WD repeat and FYVE domain containing 3 protein-coding chrX-171 chrX 39670197 39670429 + 13.9 0.000 Intergenic AluJb|SINE|Alu 9097 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr4-449 chr4 101621147 101621379 + 13.9 0.000 Intergenic Intergenic -169344 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding KI270442.1-3 KI270442.1 217792 218024 + 13.9 0.000 NA NA NA NA chr6-489 chr6 7498545 7498777 + 13.9 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -43010 NM_001008844 1832 Hs.519873 NM_004415 ENSG00000096696 DSP DCWHKTA|DP desmoplakin protein-coding chr6-556 chr6 80650139 80650371 + 13.9 0.000 Intergenic HERVH-int|LTR|ERV1 543584 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr2-417 chr2 240174405 240174637 + 13.9 0.000 Intergenic L2a|LINE|L2 -33863 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr1-1148 chr1 148038497 148038729 + 13.9 0.000 TTS (NR_004426) TTS (NR_004426) 303 NR_004426 26864 NR_004426 ENSG00000206585 RNVU1-7 RNU1-26P|RNU1-6|RNU1-6P|RNU1-9|RNU1-9P|RNVU1-9|vU1.7|vU1.9 RNA, variant U1 small nuclear 7 snRNA chr3-509 chr3 52507318 52507550 + 13.9 0.000 intron (NM_015136, intron 18 of 68) L2b|LINE|L2 12096 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr12-545 chr12 123486718 123486950 + 13.9 0.000 intron (NM_178314, intron 4 of 6) AluSx1|SINE|Alu 27130 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr4-557 chr4 66221750 66221982 + 13.9 0.000 Intergenic Intergenic -54958 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr20-327 chr20 22449900 22450132 + 13.9 0.000 Intergenic Intergenic -29373 NR_027090 284788 Hs.651993 NR_027089 ENSG00000204684 LOC284788 - uncharacterized LOC284788 ncRNA chr20-259 chr20 22958966 22959198 + 13.9 0.000 Intergenic Intergenic -76338 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding chr15-380 chr15 44340511 44340743 + 13.9 0.000 intron (NM_177974, intron 6 of 8) MER5A|DNA|hAT-Charlie 51908 NM_177974 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr5-564 chr5 9947207 9947439 + 13.9 0.000 Intergenic Intergenic -43499 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr16-627 chr16 58361980 58362212 + 13.9 0.000 Intergenic L1M1|LINE|L1 -30375 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr8-316 chr8 63114101 63114333 + 13.7 0.000 Intergenic L4_A_Mam|LINE|RTE-X -28164 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr19-845 chr19 44741898 44742130 + 13.7 0.000 Intergenic Intergenic -6694 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr6-475 chr6 158818132 158818364 + 13.7 0.000 promoter-TSS (NM_003379) promoter-TSS (NM_003379) -13 NM_003379 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr6-373 chr6 114543369 114543601 + 13.7 0.000 Intergenic AluSq|SINE|Alu -480608 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding chr4-580 chr4 87737564 87737796 + 13.7 0.000 Intergenic Intergenic -61874 NM_004967 3381 Hs.518726 NM_004967 ENSG00000029559 IBSP BNSP|BSP|BSP-II|SP-II integrin binding sialoprotein protein-coding chr19-691 chr19 17847712 17847944 + 13.7 0.000 intron (NM_000215, intron 1 of 23) CpG 204 NM_000215 3718 Hs.515247 NM_000215 ENSG00000105639 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding chr5-488 chr5 15509748 15509980 + 13.7 0.000 intron (NM_001278317, intron 1 of 3) intron (NM_001278317, intron 1 of 3) 8426 NM_001278317 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr1-928 chr1 62226269 62226501 + 13.7 0.000 Intergenic AluSq2|SINE|Alu 31536 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr10-792 chr10 112986459 112986691 + 13.7 0.000 intron (NM_001367943, intron 4 of 14) intron (NM_001367943, intron 4 of 14) 36325 NM_001363501 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr9-508 chr9 13975069 13975301 + 13.7 0.000 Intergenic Intergenic 47214 NR_038194 100113404 Hs.149786 NR_038194 ENSG00000205636 LINC00583 C9orf146 long intergenic non-protein coding RNA 583 ncRNA chr4-548 chr4 52550058 52550290 + 13.7 0.000 Intergenic L1ME4b|LINE|L1 106365 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr1-1539 chr1 201895966 201896198 + 13.7 0.000 TTS (NM_012134) TTS (NM_012134) 7405 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr17-348 chr17 17215317 17215549 + 13.7 0.000 intron (NM_001353230, intron 12 of 14) intron (NM_001353230, intron 12 of 14) -9100 NM_178836 201164 Hs.729079 NM_178836 ENSG00000179598 PLD6 ZUC phospholipase D family member 6 protein-coding chr1-1546 chr1 203475499 203475731 + 13.7 0.000 promoter-TSS (NM_002725) promoter-TSS (NM_002725) -191 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr1-1602 chr1 232847185 232847417 + 13.7 0.000 Intergenic L1MCc|LINE|L1 42409 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr8-593 chr8 141473237 141473469 + 13.7 0.000 intron (NR_102363, intron 12 of 27) intron (NR_102363, intron 12 of 27) 33876 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr7-654 chr7 4802097 4802329 + 13.7 0.000 intron (NM_018059, intron 11 of 14) intron (NM_018059, intron 11 of 14) -13574 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr4-335 chr4 17692209 17692441 + 13.7 0.000 intron (NM_015688, intron 6 of 17) intron (NM_015688, intron 6 of 17) 77684 NM_025205 80306 Hs.731966 NM_025205 ENSG00000118579 MED28 1500003D12Rik|EG1|magicin mediator complex subunit 28 protein-coding chr16-497 chr16 5671325 5671557 + 13.7 0.000 Intergenic UCON56|Unknown|Unknown 38974 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr17-727 chr17 9575699 9575931 + 13.7 0.000 promoter-TSS (NM_145054) promoter-TSS (NM_145054) 5 NM_004853 9482 Hs.431109 NM_004853 ENSG00000170310 STX8 CARB syntaxin 8 protein-coding chr14-271 chr14 32165543 32165775 + 13.7 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -36386 NR_104080 101954271 NR_104080 ENSG00000207507 RNU6-9 U6-9 RNA, U6 small nuclear 9 snRNA chr2-280 chr2 191242259 191242491 + 13.7 0.000 Intergenic Intergenic -3029 NM_001330238 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr7-682 chr7 26177296 26177528 + 13.7 0.000 intron (NM_004289, intron 1 of 3) SVA_A|Retroposon|SVA 23334 NM_002137 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chr10-709 chr10 78745847 78746079 + 13.7 0.000 Intergenic MIRb|SINE|MIR 321485 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr9-711 chr9 131759100 131759332 + 13.7 0.000 Intergenic MIR|SINE|MIR -19272 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr22-206 chr22 30605091 30605323 + 13.7 0.000 intron (NM_001282327, intron 2 of 16) AluJb|SINE|Alu 1806 NM_001282327 23481 Hs.517543 NM_014303 ENSG00000100029 PES1 NOP7|PES pescadillo ribosomal biogenesis factor 1 protein-coding chr9-635 chr9 97385746 97385978 + 13.7 0.000 Intergenic Intergenic 10829 NR_026847 286359 Hs.132262 NM_182600 LOC286359 - uncharacterized LOC286359 ncRNA chr14-433 chr14 76035071 76035303 + 13.7 0.000 intron (NR_045664, intron 3 of 7) intron (NR_045664, intron 3 of 7) 49424 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr7-425 chr7 64863905 64864137 + 13.7 0.000 Intergenic Intergenic -39221 NR_003099 10793 Hs.520889 NM_021148 ENSG00000198039 ZNF273 HZF9 zinc finger protein 273 protein-coding chrX-251 chrX 74536109 74536341 + 13.7 0.000 Intergenic Intergenic 78399 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr16-673 chr16 80830658 80830890 + 13.7 0.000 intron (NR_131948, intron 2 of 2) intron (NR_131948, intron 2 of 2) -26176 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr16-712 chr16 88522361 88522593 + 13.7 0.000 intron (NR_148997, intron 2 of 3) intron (NR_148997, intron 2 of 3) 8576 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr1-1480 chr1 161994027 161994259 + 13.7 0.000 intron (NM_001347700, intron 6 of 7) intron (NM_001347700, intron 6 of 7) 30322 NM_001347700 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr1-976 chr1 153939367 153939599 + 13.7 0.000 intron (NM_014856, intron 12 of 27) L2a|LINE|L2 5773 NM_001367466 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr1-923 chr1 53636417 53636649 + 13.7 0.000 intron (NM_001367484, intron 2 of 10) L1M5|LINE|L1 97671 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding chr14-384 chr14 34780620 34780852 + 13.7 0.000 intron (NM_013448, intron 16 of 26) L2c|LINE|L2 -65913 NR_028130 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr13-292 chr13 49308411 49308643 + 13.7 0.000 TTS (NM_030925) TTS (NM_030925) 60602 NM_030911 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr4-381 chr4 140756647 140756879 + 13.7 0.000 promoter-TSS (NM_015130) promoter-TSS (NM_015130) -378 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr5-348 chr5 142058178 142058410 + 13.7 0.000 Intergenic L1ME2|LINE|L1 -45267 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr5-729 chr5 160312951 160313183 + 13.7 0.000 promoter-TSS (NM_001308173) promoter-TSS (NM_001308173) -503 NM_001308173 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr10-815 chr10 125115650 125115882 + 13.7 0.000 intron (NM_001083914, intron 1 of 10) intron (NM_001083914, intron 1 of 10) 43011 NM_001321014 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr16-593 chr16 29782220 29782452 + 13.7 0.000 3' UTR (NM_152338, exon 4 of 4) 3' UTR (NM_152338, exon 4 of 4) 4080 NM_152338 653808 Hs.632195 NM_152338 ENSG00000174992 ZG16 JCLN|JCLN1|ZG16A zymogen granule protein 16 protein-coding chr2-409 chr2 218485473 218485705 + 13.7 0.000 intron (NM_020935, intron 16 of 25) intron (NM_020935, intron 16 of 25) 66466 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding chr9-509 chr9 15007811 15008043 + 13.7 0.000 intron (NR_003920, intron 3 of 4) intron (NR_003920, intron 3 of 4) 14600 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr5-256 chr5 157556078 157556310 + 13.7 0.000 intron (NM_033274, intron 3 of 22) AluSx|SINE|Alu 19581 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr6-279 chr6 73461859 73462091 + 13.7 0.000 exon (NM_012123, exon 1 of 12) exon (NM_012123, exon 1 of 12) 238 NM_133645 25821 Hs.347614 NM_012123 ENSG00000135297 MTO1 CGI-02|COXPD10 mitochondrial tRNA translation optimization 1 protein-coding chr17-381 chr17 2174824 2175056 + 13.7 0.000 intron (NM_001256827, intron 5 of 11) intron (NM_001256827, intron 5 of 11) -57738 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr13-150 chr13 75735505 75735737 + 13.7 0.000 intron (NM_005358, intron 4 of 29) AluSc|SINE|Alu -24699 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr12-758 chr12 131802085 131802317 + 13.7 0.000 Intergenic Intergenic -26192 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr15-434 chr15 74818632 74818864 + 13.7 0.000 exon (NM_021819, exon 5 of 14) exon (NM_021819, exon 5 of 14) 5913 NM_021819 79748 Hs.620644 NM_021819 ENSG00000140506 LMAN1L ERGIC-53L|ERGL lectin, mannose binding 1 like protein-coding chr3-921 chr3 192030397 192030629 + 13.7 0.000 Intergenic Intergenic -208117 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr11-968 chr11 119422961 119423193 + 13.7 0.000 promoter-TSS (NM_001311160) promoter-TSS (NM_001311160) -515 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr19-425 chr19 3637993 3638225 + 13.7 0.000 intron (NM_001300849, intron 16 of 16) intron (NM_001300849, intron 16 of 16) -11294 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr11-687 chr11 62726872 62727104 + 13.7 0.000 non-coding (NR_037946, exon 1 of 24) non-coding (NR_037946, exon 1 of 24) 396 NR_037946 100534595 Hs.533709 NR_037946 ENSG00000234857 HNRNPUL2-BSCL2 - HNRNPUL2-BSCL2 readthrough (NMD candidate) ncRNA chr19-616 chr19 23394598 23394830 + 13.7 0.000 intron (NM_003430, intron 1 of 3) AluSx1|SINE|Alu 757 NM_003430 7644 Hs.58834 NM_003430 ENSG00000167232 ZNF91 HPF7|HTF10 zinc finger protein 91 protein-coding chr18-221 chr18 48951670 48951902 + 13.7 0.000 Intergenic CpG -1075 NM_005904 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr12-651 chr12 57319696 57319928 + 13.7 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) 21962 NM_001351209 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr5-621 chr5 67149943 67150175 + 13.7 0.000 intron (NM_001297651, intron 21 of 25) intron (NM_001297651, intron 21 of 25) 46740 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding chr11-661 chr11 134647518 134647750 + 13.7 0.000 Intergenic Intergenic -88311 NR_147836 729305 Hs.148365 NR_147836 ENSG00000251226 LINC02714 - long intergenic non-protein coding RNA 2714 ncRNA chr3-874 chr3 155556556 155556788 + 13.7 0.000 intron (NM_001349252, intron 8 of 24) MLT2C1|LTR|ERVL 70869 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chr12-268 chr12 131648548 131648780 + 13.7 0.000 promoter-TSS (NR_146868) promoter-TSS (NR_146868) -543 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr10-825 chr10 128371078 128371310 + 13.7 0.000 Intergenic MSTA|LTR|ERVL-MaLR 85244 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr1-592 chr1 8817745 8817977 + 13.7 0.000 promoter-TSS (NM_012102) promoter-TSS (NM_012102) -221 NM_012102 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr11-563 chr11 35937666 35937898 + 13.7 0.000 Intergenic Intergenic -6199 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr8-323 chr8 79959970 79960202 + 13.7 0.000 intron (NM_014018, intron 2 of 2) intron (NM_014018, intron 2 of 2) 70173 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding chr14-469 chr14 102565231 102565463 + 13.7 0.000 Intergenic AluSx1|SINE|Alu 20093 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr2-550 chr2 170973926 170974158 + 13.7 0.000 Intergenic CpG 44789 NM_015530 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding chr10-536 chr10 28458594 28458826 + 13.7 0.000 intron (NR_134496, intron 1 of 2) AluJo|SINE|Alu 37103 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chrX-253 chrX 81120835 81121067 + 13.7 0.000 intron (NM_030763, intron 2 of 6) intron (NM_030763, intron 2 of 6) 80962 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr15-314 chr15 43053799 43054031 + 13.7 0.000 intron (NM_174916, intron 12 of 46) AluSc|SINE|Alu 52123 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr8-598 chr8 142001897 142002129 + 13.7 0.000 Intergenic Intergenic -174326 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr12-475 chr12 123458577 123458809 + 13.7 0.000 intron (NR_104103, intron 1 of 1) AluSc8|SINE|Alu 554 NM_022717 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr4-621 chr4 126436779 126437011 + 13.7 0.000 Intergenic L1MB1|LINE|L1 929636 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr19-603 chr19 17321650 17321882 + 13.7 0.000 3' UTR (NM_024050, exon 5 of 5) 3' UTR (NM_024050, exon 5 of 5) 12203 NM_024050 79016 Hs.466154 NM_024050 ENSG00000130311 DDA1 C19orf58|PCIA1 DET1 and DDB1 associated 1 protein-coding chr10-370 chr10 23438859 23439091 + 13.7 0.000 promoter-TSS (NM_001145373) promoter-TSS (NM_001145373) -294 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr6-246 chr6 144284661 144284893 + 13.7 0.000 Intergenic Intergenic -6960 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr6-499 chr6 15504803 15505035 + 13.7 0.000 intron (NM_004973, intron 9 of 17) intron (NM_004973, intron 9 of 17) 158109 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr9-119 chr9 115714013 115714245 + 13.7 0.000 Intergenic Intergenic 30110 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr9-586 chr9 24619220 24619452 + 13.7 0.000 Intergenic LTR1F1|LTR|ERV1 -73439 NM_001365008 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr22-303 chr22 42405746 42405978 + 13.7 0.000 intron (NM_001318323, intron 2 of 4) intron (NM_001318323, intron 2 of 4) 26497 NM_145912 150372 Hs.436677 NM_145912 ENSG00000235568 NFAM1 CNAIP NFAT activating protein with ITAM motif 1 protein-coding chr8-352 chr8 124577647 124577879 + 13.7 0.000 intron (NM_001363294, intron 6 of 13) intron (NM_001363294, intron 6 of 13) 38640 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr19-575 chr19 6325975 6326207 + 13.7 0.000 intron (NM_133492, intron 1 of 5) AluJo|SINE|Alu 7521 NM_133492 125981 Hs.352609 NM_133492 ENSG00000167769 ACER1 ALKCDase1|ASAH3 alkaline ceramidase 1 protein-coding chr7-239 chr7 101099928 101100160 + 13.7 0.000 Intergenic Intergenic 14563 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr1-1598 chr1 228818753 228818985 + 13.7 0.000 Intergenic MER52C|LTR|ERV1 83390 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr9-535 chr9 106862985 106863217 + 13.7 0.000 promoter-TSS (NM_021224) promoter-TSS (NM_021224) -65 NM_021224 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chrX-239 chrX 53379611 53379843 + 13.7 0.000 3' UTR (NM_006306, exon 25 of 25) 3' UTR (NM_006306, exon 25 of 25) 26038 NR_106916 102465516 NR_106916 ENSG00000278204 MIR6857 hsa-mir-6857 microRNA 6857 ncRNA chr20-195 chr20 21229298 21229530 + 13.7 0.000 intron (NM_018474, intron 10 of 12) intron (NM_018474, intron 10 of 12) -11125 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA chr15-235 chr15 33067364 33067596 + 13.5 0.000 exon (NM_001103184, exon 1 of 17) exon (NM_001103184, exon 1 of 17) 694 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr5-708 chr5 149141735 149141967 + 13.5 0.000 5' UTR (NM_001301015, exon 1 of 23) 5' UTR (NM_001301015, exon 1 of 23) 120 NM_001301015 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding chr5-558 chr5 2764759 2764991 + 13.5 0.000 Intergenic Intergenic 12744 NM_001294337 153571 Hs.148486 NM_178569 ENSG00000186493 C5orf38 CEI|IRX2NB chromosome 5 open reading frame 38 protein-coding chr11-648 chr11 120875044 120875276 + 13.5 0.000 exon (NM_014619, exon 11 of 21) exon (NM_014619, exon 11 of 21) 19637 NR_132790 101929227 Hs.627156 NR_132790 ENSG00000250493 LOC101929227 - uncharacterized LOC101929227 ncRNA chr5-643 chr5 94454162 94454394 + 13.5 0.000 intron (NM_001145678, intron 12 of 20) intron (NM_001145678, intron 12 of 20) 164326 NM_173665 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding chr11-966 chr11 119315564 119315796 + 13.5 0.000 intron (NM_006500, intron 1 of 15) intron (NM_006500, intron 1 of 15) 1450 NM_006500 4162 Hs.599039 NM_006500 ENSG00000076706 MCAM CD146|HEMCAM|METCAM|MUC18|MelCAM melanoma cell adhesion molecule protein-coding chr1-1282 chr1 22019424 22019656 + 13.5 0.000 Intergenic Intergenic -5651 NR_023918 29092 Hs.279842 NR_023918 ENSG00000218510 LINC00339 HSPC157|NCRNA00339 long intergenic non-protein coding RNA 339 ncRNA chr19-420 chr19 56993628 56993860 + 13.5 0.000 Intergenic AluY|SINE|Alu -126397 NM_020903 57663 Hs.515632 NM_020903 ENSG00000131864 USP29 HOM-TES-84/86 ubiquitin specific peptidase 29 protein-coding chr11-750 chr11 285055 285287 + 13.5 0.000 exon (NM_001276700, exon 8 of 8) exon (NM_001276700, exon 8 of 8) -3955 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chr12-530 chr12 69818303 69818535 + 13.5 0.000 non-coding (NR_103520, exon 9 of 9) non-coding (NR_103520, exon 9 of 9) -6808 NM_182530 196446 Hs.253773 NM_182530 ENSG00000166268 MYRFL C12orf15|C12orf28|bcm1377 myelin regulatory factor like protein-coding chr2-305 chr2 33349296 33349528 + 13.5 0.000 intron (NM_206943, intron 26 of 33) AluSz6|SINE|Alu -69104 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr8-123 chr8 127144004 127144236 + 13.5 0.000 Intergenic LOR1-int|LTR|ERV1 53507 NR_120364 103021165 Hs.573407 NR_120364 CASC19 CARLO6|CARLo-6|LINC01245 cancer susceptibility 19 ncRNA chr12-264 chr12 111267199 111267431 + 13.5 0.000 intron (NM_015267, intron 4 of 21) MER5A1|DNA|hAT-Charlie -36827 NR_106818 102465455 NR_106818 ENSG00000273700 MIR6760 hsa-mir-6760 microRNA 6760 ncRNA chr6-226 chr6 88166209 88166441 + 13.5 0.000 promoter-TSS (NM_001365872) promoter-TSS (NM_001365872) 22 NM_001365869 1268 Hs.75110 NM_016083 ENSG00000118432 CNR1 CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR cannabinoid receptor 1 protein-coding chr2-357 chr2 197310618 197310850 + 13.5 0.000 promoter-TSS (NM_001195144) promoter-TSS (NM_001195144) 46 NM_001367496 91526 Hs.432706 NM_153697 ENSG00000065413 ANKRD44 PP6-ARS-B ankyrin repeat domain 44 protein-coding chr12-220 chr12 56189301 56189533 + 13.5 0.000 promoter-TSS (NM_003075) promoter-TSS (NM_003075) 66 NM_001330288 6601 Hs.236030 NM_003075 ENSG00000139613 SMARCC2 BAF170|CRACC2|CSS8|Rsc8 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding chr5-707 chr5 145975480 145975712 + 13.5 0.000 intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 39018 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr9-401 chr9 17994151 17994383 + 13.5 0.000 Intergenic Intergenic 415201 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr15-471 chr15 92192908 92193140 + 13.5 0.000 Intergenic Intergenic -200857 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chr6-112 chr6 17865792 17866024 + 13.5 0.000 intron (NM_001105567, intron 4 of 36) intron (NM_001105567, intron 4 of 36) 121727 NM_001243423 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr4-337 chr4 22800704 22800936 + 13.5 0.000 intron (NR_102357, intron 4 of 4) intron (NR_102357, intron 4 of 4) 86731 NM_001277225 57733 Hs.653107 NM_020973 ENSG00000249948 GBA3 CBG|CBGL1|GLUC|KLRP glucosylceramidase beta 3 (gene/pseudogene) protein-coding chr3-637 chr3 58063487 58063719 + 13.5 0.000 intron (NM_001164318, intron 1 of 45) intron (NM_001164318, intron 1 of 45) 55181 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr9-334 chr9 133889597 133889829 + 13.5 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 102611 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr16-494 chr16 3704865 3705097 + 13.5 0.000 intron (NM_016292, intron 1 of 17) L1MB7|LINE|L1 12543 NM_016292 10131 Hs.30345 NM_016292 ENSG00000126602 TRAP1 HSP 75|HSP75|HSP90L|TRAP-1 TNF receptor associated protein 1 protein-coding chr22-356 chr22 17326284 17326516 + 13.5 0.000 Intergenic L1MC1|LINE|L1 -33549 NM_001290046 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr11-772 chr11 6545985 6546217 + 13.5 0.000 exon (NM_144666, exon 21 of 43) exon (NM_144666, exon 21 of 43) 48805 NM_144666 144132 Hs.720080 NM_144666 ENSG00000179532 DNHD1 C11orf47|CCDC35|DHCD1|DNHD1L dynein heavy chain domain 1 protein-coding chr7-630 chr7 158263137 158263369 + 13.5 0.000 intron (NM_001308267, intron 2 of 21) intron (NM_001308267, intron 2 of 21) 269560 NR_030325 693180 NR_030325 ENSG00000207637 MIR595 MIRN595|hsa-mir-595 microRNA 595 ncRNA chrX-193 chrX 136916536 136916768 + 13.5 0.000 Intergenic AluSx3|SINE|Alu -35872 NR_028476 27316 Hs.380118 NM_002139 ENSG00000147274 RBMX HNRNPG|HNRPG|MRXS11|RBMXP1|RBMXRT|RNMX|hnRNP-G RNA binding motif protein X-linked protein-coding chr5-657 chr5 112762219 112762451 + 13.5 0.000 intron (NM_001354895, intron 2 of 15) L1ME3|LINE|L1 24450 NM_001354900 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr11-716 chr11 79458789 79459021 + 13.5 0.000 Intergenic Intergenic -17875 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr1-1505 chr1 178331410 178331642 + 13.5 0.000 intron (NM_170692, intron 3 of 17) intron (NM_170692, intron 3 of 17) -9925 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr7-648 chr7 2498539 2498771 + 13.5 0.000 Intergenic Intergenic -13874 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr2-558 chr2 196850071 196850303 + 13.5 0.000 intron (NM_001321099, intron 21 of 27) LTR33|LTR|ERVL -39911 NM_213608 401027 Hs.245666 NM_213608 ENSG00000187944 C2orf66 IIDS6411|UNQ6411 chromosome 2 open reading frame 66 protein-coding chr1-827 chr1 2429682 2429914 + 13.5 0.000 Intergenic Intergenic -17227 NM_002617 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr10-362 chr10 3775494 3775726 + 13.5 0.000 TTS (NM_001160124) TTS (NM_001160124) 9599 NR_027653 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr3-871 chr3 153856826 153857058 + 13.5 0.000 Intergenic LTR79|LTR|ERVL -94416 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA chr6-133 chr6 93743119 93743351 + 13.5 0.000 intron (NR_152795, intron 5 of 6) L1PA13|LINE|L1 24932 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr22-232 chr22 48689722 48689954 + 13.5 0.000 intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) -90457 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA chr8-502 chr8 67746228 67746460 + 13.5 0.000 promoter-TSS (NM_020361) promoter-TSS (NM_020361) 16 NM_020361 57094 Hs.658850 NM_020361 ENSG00000165078 CPA6 CPAH|ETL5|FEB11 carboxypeptidase A6 protein-coding chr3-605 chr3 14948258 14948490 + 13.5 0.000 promoter-TSS (NR_046252) promoter-TSS (NR_046252) 67 NR_046251 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr7-803 chr7 108460129 108460361 + 13.5 0.000 Intergenic Intergenic -3525 NM_001371124 chr2-498 chr2 197158970 197159202 + 13.5 0.000 intron (NM_153697, intron 2 of 9) intron (NM_153697, intron 2 of 9) -38905 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chrX-143 chrX 108825219 108825451 + 13.5 0.000 Intergenic L1PA7|LINE|L1 88795 NR_110652 101928358 Hs.722300 NR_110652 ENSG00000237863 LOC101928358 - uncharacterized LOC101928358 ncRNA chr9-215 chr9 91809561 91809793 + 13.5 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 140551 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr22-297 chr22 39693716 39693948 + 13.5 0.000 Intergenic Intergenic 123079 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr4-509 chr4 6724255 6724487 + 13.5 0.000 Intergenic Intergenic 8197 NM_018366 55330 Hs.7570 NM_018366 ENSG00000186222 BLOC1S4 BCAS4L|BLOS4|CNO biogenesis of lysosomal organelles complex 1 subunit 4 protein-coding chr1-1168 chr1 175876031 175876263 + 13.5 0.000 Intergenic Intergenic -1196 NR_125964 101928751 NR_125964 ENSG00000224718 LINC01657 - long intergenic non-protein coding RNA 1657 ncRNA chr12-639 chr12 53097530 53097762 + 13.5 0.000 promoter-TSS (NM_002178) promoter-TSS (NM_002178) -21 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr8-497 chr8 57345276 57345508 + 13.5 0.000 intron (NR_125818, intron 2 of 8) intron (NR_125818, intron 2 of 8) 1605 NR_125818 101929488 Hs.407557 NR_125818 ENSG00000253871 LOC101929488 - uncharacterized LOC101929488 ncRNA chr12-597 chr12 26396966 26397198 + 13.5 0.000 intron (NM_002223, intron 54 of 56) L2c|LINE|L2 201509 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr16-525 chr16 77308331 77308563 + 13.5 0.000 intron (NM_199355, intron 16 of 22) A-rich|Low_complexity|Low_complexity 109039 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding chr1-1488 chr1 164927141 164927373 + 13.5 0.000 Intergenic MIR|SINE|MIR -152616 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr21-96 chr21 41895305 41895537 + 13.5 0.000 intron (NM_199050, intron 12 of 12) intron (NM_199050, intron 12 of 12) -15939 NM_022115 63977 Hs.473893 NM_022115 ENSG00000141956 PRDM15 C21orf83|PFM15|ZNF298 PR/SET domain 15 protein-coding chr16-310 chr16 29805589 29805821 + 13.5 0.000 promoter-TSS (NM_001276276) promoter-TSS (NM_001276276) -419 NM_001276275 4150 Hs.23650 NM_002383 ENSG00000103495 MAZ PUR1|Pur-1|SAF-1|SAF-2|SAF-3|ZF87|ZNF801|Zif87 MYC associated zinc finger protein protein-coding chr12-593 chr12 24903125 24903357 + 13.5 0.000 promoter-TSS (NM_001178093) promoter-TSS (NM_001178093) -174 NM_001178093 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr6-567 chr6 99196375 99196607 + 13.5 0.000 Intergenic L2a|LINE|L2 71882 NR_039672 100616347 NR_039672 ENSG00000265226 MIR548AI - microRNA 548ai ncRNA chr11-708 chr11 69337357 69337589 + 13.5 0.000 Intergenic L1ME1|LINE|L1 43318 NM_001300924 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr6-599 chr6 134422821 134423053 + 13.5 0.000 Intergenic Intergenic -14779 NR_038217 154092 Hs.223718 NR_038216 LINC01010 - long intergenic non-protein coding RNA 1010 ncRNA chr5-112 chr5 103377279 103377511 + 13.5 0.000 Intergenic L1M2|LINE|L1 117971 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr13-278 chr13 42876859 42877091 + 13.5 0.000 Intergenic L3|LINE|CR1 -4231 NR_126389 104355147 Hs.633967 NR_126388 LINC00428 - long intergenic non-protein coding RNA 428 ncRNA chr7-407 chr7 578554 578786 + 13.5 0.000 intron (NM_001164760, intron 9 of 10) AluSx|SINE|Alu 16712 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr14-108 chr14 27097223 27097455 + 13.5 0.000 Intergenic AluSx3|SINE|Alu 188697 NR_036193 100423019 NR_036193 ENSG00000265165 MIR4307 - microRNA 4307 ncRNA chr20-214 chr20 35561543 35561775 + 13.5 0.000 intron (NR_119376, intron 38 of 42) intron (NR_119376, intron 38 of 42) 19581 NM_198398 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr9-285 chr9 35678456 35678688 + 13.5 0.000 intron (NM_001216, intron 6 of 10) intron (NM_001216, intron 6 of 10) 4644 NM_001216 768 Hs.63287 NM_001216 ENSG00000107159 CA9 CAIX|MN carbonic anhydrase 9 protein-coding chr22-442 chr22 49836579 49836811 + 13.5 0.000 Intergenic L2|LINE|L2 -8822 NM_001304808 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chrX-136 chrX 98053202 98053434 + 13.5 0.000 Intergenic L1MA2|LINE|L1 -488783 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr8-539 chr8 102747696 102747928 + 13.5 0.000 Intergenic Intergenic -59010 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr2-1131 chr2 224865147 224865379 + 13.5 0.000 intron (NM_001290263, intron 11 of 55) intron (NM_001290263, intron 11 of 55) 81786 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr4-638 chr4 141275816 141276048 + 13.5 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 55037 NM_001292002 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding chr3-902 chr3 181310554 181310786 + 13.5 0.000 intron (NR_075091, intron 3 of 7) intron (NR_075091, intron 3 of 7) 78933 NR_104084 101954275 NR_104084 ENSG00000201654 RNU6-7 U6-7 RNA, U6 small nuclear 7 snRNA chr3-901 chr3 181123378 181123610 + 13.5 0.000 intron (NR_075091, intron 2 of 7) L1PA11|LINE|L1 -51650 NR_075093 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr2-941 chr2 46940880 46941112 + 13.5 0.000 promoter-TSS (NM_001288955) promoter-TSS (NM_001288955) -228 NM_001288955 57217 Hs.370603 NM_020458 ENSG00000068724 TTC7A GIDID|MINAT|TTC7 tetratricopeptide repeat domain 7A protein-coding chr12-367 chr12 113124072 113124304 + 13.5 0.000 intron (NM_004658, intron 5 of 21) AluSz6|SINE|Alu 11411 NM_001301202 8437 Hs.528693 NM_004658 ENSG00000111344 RASAL1 RASAL RAS protein activator like 1 protein-coding chr17-792 chr17 46957489 46957721 + 13.5 0.000 intron (NM_001321133, intron 6 of 6) AluSx1|SINE|Alu -15412 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chr5-519 chr5 134733524 134733756 + 13.5 0.000 Intergenic AluSc8|SINE|Alu -4908 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr15-336 chr15 78767828 78768060 + 13.5 0.000 intron (NM_014272, intron 17 of 23) intron (NM_014272, intron 17 of 23) 15907 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr14-461 chr14 100216662 100216894 + 13.5 0.000 Intergenic Intergenic -22366 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr3-927 chr3 195416301 195416533 + 13.5 0.000 intron (NM_012287, intron 1 of 22) L1ME3C|LINE|L1 26603 NM_012287 23527 Hs.593373 NM_012287 ENSG00000114331 ACAP2 CENTB2|CNT-B2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 protein-coding chr11-536 chr11 300145 300377 + 13.5 0.000 promoter-TSS (NM_001025295) promoter-TSS (NM_001025295) -735 NM_001025295 387733 Hs.443469 NM_001025295 ENSG00000206013 IFITM5 BRIL|DSPA1|Hrmp1|OI5|fragilis4 interferon induced transmembrane protein 5 protein-coding chr14-361 chr14 84487313 84487545 + 13.5 0.000 Intergenic G-rich|Low_complexity|Low_complexity -784503 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr18-219 chr18 48254537 48254769 + 13.5 0.000 intron (NM_001371290, intron 5 of 9) LTR9|LTR|ERV1 2352 NM_001350280 84322 Hs.334493 NM_032362 C18orf12 HEIL1|HsT2508 chromosome 18 open reading frame 12 protein-coding chr18-228 chr18 57036438 57036670 + 13.5 0.000 Intergenic LTR16|LTR|ERVL 35565 NR_048536 100885779 Hs.565136 NR_048536 ENSG00000258609 LINC-ROR ROR|lincRNA-RoR|lincRNA-ST8SIA3 long intergenic non-protein coding RNA, regulator of reprogramming ncRNA chr3-865 chr3 150945579 150945811 + 13.5 0.000 intron (NR_046380, intron 1 of 4) L1ME4b|LINE|L1 -1459 NM_052995 7401 Hs.745448 NM_052995 ENSG00000163646 CLRN1 RP61|USH3|USH3A clarin 1 protein-coding chr10-276 chr10 18315453 18315685 + 13.5 0.000 intron (NM_000724, intron 1 of 12) AluJo|SINE|Alu -25140 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr5-364 chr5 178849736 178849968 + 13.5 0.000 Intergenic AluSz6|SINE|Alu -10101 NM_058230 117608 Hs.724051 NM_058230 ENSG00000178338 ZNF354B KID2 zinc finger protein 354B protein-coding chr10-587 chr10 128610203 128610435 + 13.5 0.000 Intergenic (CACATG)n|Simple_repeat|Simple_repeat -302514 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr10-805 chr10 122461926 122462158 + 13.5 0.000 exon (NM_002775, exon 1 of 9) exon (NM_002775, exon 1 of 9) 489 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr19-439 chr19 28788163 28788395 + 13.5 0.000 Intergenic AluSg|SINE|Alu -60585 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr19-731 chr19 55115881 55116113 + 13.5 0.000 intron (NM_001271618, intron 1 of 21) intron (NM_001271618, intron 1 of 21) 1640 NM_001271618 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr11-834 chr11 61705218 61705450 + 13.5 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 24943 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr2-1076 chr2 181397666 181397898 + 13.5 0.000 intron (NR_130784, intron 4 of 4) intron (NR_130784, intron 4 of 4) -59110 NM_001316312 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr5-358 chr5 160323114 160323346 + 13.5 0.000 intron (NR_131769, intron 1 of 7) AluSg4|SINE|Alu -10666 NM_001308173 79616 Hs.14070 NM_024565 ENSG00000135083 CCNJL - cyclin J like protein-coding chr8-434 chr8 6406494 6406726 + 13.5 0.000 promoter-TSS (NM_001363979) promoter-TSS (NM_001363979) -17 NM_001322042 79648 Hs.593807 NM_024596 ENSG00000147316 MCPH1 BRIT1|MCT microcephalin 1 protein-coding chr3-310 chr3 10701537 10701769 + 13.5 0.000 Intergenic Intergenic 62556 NR_152730 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA chr7-584 chr7 51777711 51777943 + 13.5 0.000 Intergenic MIR|SINE|MIR -384571 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA chr16-528 chr16 81626796 81627028 + 13.5 0.000 intron (NM_030629, intron 3 of 20) (TG)n|Simple_repeat|Simple_repeat 15564 NR_106759 102465251 NR_106759 ENSG00000275109 MIR6504 hsa-mir-6504 microRNA 6504 ncRNA chr2-947 chr2 48510037 48510269 + 13.5 0.000 intron (NR_024188, intron 20 of 21) intron (NR_024188, intron 20 of 21) -19772 NM_001198593 286749 Hs.732016 NM_172311 ENSG00000068781 STON1-GTF2A1L ALF|GTF2A1L|GTF2A1LF|SALF STON1-GTF2A1L readthrough protein-coding chr7-800 chr7 107685828 107686060 + 13.5 0.000 intron (NM_000441, intron 8 of 20) intron (NM_000441, intron 8 of 20) -24146 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA chr4-520 chr4 10482841 10483073 + 13.5 0.000 Intergenic LTR86B2|LTR|ERVL -25531 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr3-730 chr3 31031189 31031421 + 13.5 0.000 Intergenic L1MC2|LINE|L1 130482 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chrX-296 chrX 153764296 153764528 + 13.3 0.000 intron (NM_001163257, intron 1 of 36) intron (NM_001163257, intron 1 of 36) 163 NM_005393 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr9-753 chr9 137317729 137317961 + 13.3 0.000 intron (NM_017820, intron 19 of 21) intron (NM_017820, intron 19 of 21) -15574 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr5-318 chr5 177545649 177545881 + 13.3 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 8330 NM_001366499 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr3-807 chr3 93881081 93881313 + 13.3 0.000 intron (NM_000313, intron 12 of 14) AluJb|SINE|Alu 92884 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr10-63 chr10 61837187 61837419 + 13.3 0.000 Intergenic Intergenic -64396 NM_032199 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr4-300 chr4 139083578 139083810 + 13.3 0.000 intron (NM_001371336, intron 4 of 8) CpG 530 NM_001276459 1998 Hs.634040 NM_006874 ENSG00000109381 ELF2 EU32|NERF|NERF-1A|NERF-1B|NERF-1a,b|NERF-2 E74 like ETS transcription factor 2 protein-coding KI270589.1-2 KI270589.1 41557 41789 + 13.3 0.000 NA NA NA NA chr22-373 chr22 27239438 27239670 + 13.3 0.000 Intergenic Intergenic -14875 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr10-485 chr10 102675925 102676157 + 13.3 0.000 3' UTR (NM_004311, exon 6 of 6) 3' UTR (NM_004311, exon 6 of 6) 31546 NM_001345950 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr3-463 chr3 188623219 188623451 + 13.3 0.000 intron (NM_005578, intron 6 of 10) AluSz|SINE|Alu -54669 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr5-373 chr5 14675429 14675661 + 13.3 0.000 intron (NM_138348, intron 2 of 6) intron (NM_138348, intron 2 of 6) 10827 NM_138348 90268 Hs.406335 NM_138348 ENSG00000154124 OTULIN AIPDS|FAM105B|GUM OTU deubiquitinase with linear linkage specificity protein-coding chr19-446 chr19 43527139 43527371 + 13.3 0.000 promoter-TSS (NM_001320867) promoter-TSS (NM_001320867) -54 NM_001320868 23474 Hs.7486 NM_014297 ENSG00000105755 ETHE1 HSCO|YF13H12 ETHE1 persulfide dioxygenase protein-coding chr15-440 chr15 75347293 75347525 + 13.3 0.000 promoter-TSS (NR_046311) promoter-TSS (NR_046311) -210 NM_001256552 79661 Hs.512732 NM_024608 ENSG00000140398 NEIL1 FPG1|NEI1|hFPG1 nei like DNA glycosylase 1 protein-coding chr20-212 chr20 34769260 34769492 + 13.3 0.000 intron (NM_001242539, intron 2 of 11) AluSx1|SINE|Alu 13028 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding chr1-1163 chr1 162613618 162613850 + 13.3 0.000 Intergenic Intergenic -17129 NM_001354983 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr4-569 chr4 74812997 74813229 + 13.3 0.000 Intergenic L2c|LINE|L2 -18590 NM_001316963 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding chrX-258 chrX 97389756 97389988 + 13.3 0.000 intron (NM_007309, intron 25 of 26) LTR26|LTR|ERV1 174663 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr7-693 chr7 33604159 33604391 + 13.3 0.000 intron (NR_145411, intron 22 of 23) intron (NR_145411, intron 22 of 23) -300640 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr8-494 chr8 48476690 48476922 + 13.3 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -74761 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr15-457 chr15 87609402 87609634 + 13.3 0.000 Intergenic Intergenic 32589 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chrX-234 chrX 49063643 49063875 + 13.3 0.000 intron (NM_001163322, intron 4 of 10) intron (NM_001163322, intron 4 of 10) 4760 NM_001163323 90060 Hs.522643 NM_033626 ENSG00000147144 CCDC120 JM11 coiled-coil domain containing 120 protein-coding chr7-531 chr7 116963479 116963711 + 13.3 0.000 intron (NR_161423, intron 1 of 13) intron (NR_161423, intron 1 of 13) -9261 NR_002330 93653 Hs.597516 NR_002330 ENSG00000227199 ST7-AS1 ST7AS1|ST7OT1 ST7 antisense RNA 1 ncRNA chr6-495 chr6 12792696 12792928 + 13.3 0.000 intron (NM_001322308, intron 3 of 13) intron (NM_001322308, intron 3 of 13) 74113 NM_001322310 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr7-450 chr7 157230719 157230951 + 13.3 0.000 intron (NM_014671, intron 17 of 22) intron (NM_014671, intron 17 of 22) 91909 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr13-145 chr13 51503252 51503484 + 13.3 0.000 Intergenic Intergenic -49221 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr19-619 chr19 31783293 31783525 + 13.3 0.000 Intergenic AluJb|SINE|Alu 191128 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr12-219 chr12 56079960 56080192 + 13.3 0.000 promoter-TSS (NM_001982) promoter-TSS (NM_001982) -32 NM_001005915 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr11-782 chr11 10456304 10456536 + 13.3 0.000 intron (NM_001025390, intron 1 of 14) intron (NM_001025390, intron 1 of 14) 364 NM_001025390 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr1-1183 chr1 207867006 207867238 + 13.3 0.000 Intergenic Intergenic 44003 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr5-262 chr5 179037498 179037730 + 13.3 0.000 Intergenic MLT1G3|LTR|ERVL-MaLR 13810 NM_001353374 345462 Hs.445740 NM_001136116 ENSG00000234284 ZNF879 DKFZp686E2433 zinc finger protein 879 protein-coding chr18-225 chr18 55478003 55478235 + 13.3 0.000 intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) -1102 NR_039754 100616290 NR_039754 ENSG00000264571 MIR4529 - microRNA 4529 ncRNA chr5-620 chr5 66869741 66869973 + 13.3 0.000 intron (NM_015183, intron 1 of 27) intron (NM_015183, intron 1 of 27) 41084 NM_015183 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-972 chr2 74100678 74100910 + 13.3 0.000 exon (NM_001366022, exon 11 of 11) exon (NM_001366022, exon 11 of 11) 47118 NM_001035505 388962 Hs.61472 NM_212552 ENSG00000163170 BOLA3 MMDS2 bolA family member 3 protein-coding chr7-521 chr7 103637437 103637669 + 13.3 0.000 intron (NM_005045, intron 17 of 64) Charlie4z|DNA|hAT-Charlie -191346 NR_135802 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr15-437 chr15 74905927 74906159 + 13.3 0.000 intron (NR_135854, intron 1 of 4) intron (NR_135854, intron 1 of 4) 808 NM_001321920 57184 Hs.367690 NM_020447 ENSG00000178761 FAM219B C15orf17 family with sequence similarity 219 member B protein-coding chr1-1513 chr1 182241964 182242196 + 13.3 0.000 intron (NR_104175, intron 2 of 2) LTR88c|LTR|Gypsy? 71981 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr19-873 chr19 50790357 50790589 + 13.3 0.000 promoter-TSS (NM_033068) promoter-TSS (NM_033068) 58 NM_033068 93650 NM_033068 ENSG00000142513 ACP4 ACPT|AI1J acid phosphatase 4 protein-coding chr18-235 chr18 60191674 60191906 + 13.3 0.000 Intergenic Intergenic 180985 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr1-858 chr1 19670275 19670507 + 13.3 0.000 intron (NM_000871, intron 1 of 2) L2a|LINE|L2 5516 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chrX-268 chrX 116317584 116317816 + 13.3 0.000 Intergenic L1M1|LINE|L1 -118906 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr20-328 chr20 24350890 24351122 + 13.3 0.000 Intergenic Intergenic -118193 NM_001323606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr8-285 chr8 17923763 17923995 + 13.3 0.000 intron (NM_001352647, intron 1 of 36) intron (NM_001352647, intron 1 of 36) 891 NM_001352633 5108 Hs.491148 NM_006197 ENSG00000078674 PCM1 PTC4|RET/PCM-1 pericentriolar material 1 protein-coding chr6-259 chr6 3732545 3732777 + 13.3 0.000 intron (NM_183373, intron 3 of 4) intron (NM_183373, intron 3 of 4) 19351 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr1-1270 chr1 19203108 19203340 + 13.3 0.000 intron (NM_020765, intron 1 of 105) intron (NM_020765, intron 1 of 105) 7042 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr16-701 chr16 85894062 85894294 + 13.3 0.000 Intergenic Intergenic -4984 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr6-355 chr6 70933572 70933804 + 13.3 0.000 intron (NM_080742, intron 1 of 3) intron (NM_080742, intron 1 of 3) 23372 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr19-778 chr19 11108415 11108647 + 13.3 0.000 intron (NM_001195803, intron 5 of 15) AluSz|SINE|Alu -4943 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr17-780 chr17 41679319 41679551 + 13.3 0.000 Intergenic LTR73|LTR|ERV1 -9450 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr6-528 chr6 41682076 41682308 + 13.3 0.000 Intergenic Intergenic 43724 NM_005586 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr4-389 chr4 152269152 152269384 + 13.3 0.000 Intergenic AluJr|SINE|Alu -68387 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr17-384 chr17 4530422 4530654 + 13.3 0.000 intron (NM_001124758, intron 3 of 12) intron (NM_001124758, intron 3 of 12) 24846 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr1-1477 chr1 158507268 158507500 + 13.3 0.000 Intergenic L1M1|LINE|L1 27506 NM_001004472 343406 Hs.451913 NM_001004472 ENSG00000198965 OR10R2 OR1-8|OR10R2Q olfactory receptor family 10 subfamily R member 2 protein-coding chr12-379 chr12 131895902 131896134 + 13.3 0.000 intron (NM_003565, intron 3 of 27) intron (NM_003565, intron 3 of 27) 1396 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr2-971 chr2 73074052 73074284 + 13.3 0.000 3' UTR (NM_015470, exon 5 of 5) 3' UTR (NM_015470, exon 5 of 5) -2332 NM_144579 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr9-424 chr9 72191345 72191577 + 13.3 0.000 intron (NM_001351571, intron 1 of 13) intron (NM_001351571, intron 1 of 13) 42021 NM_001351571 9615 Hs.494163 NM_004293 ENSG00000119125 GDA CYPIN|GAH|GUANASE|NEDASIN guanine deaminase protein-coding chr14-187 chr14 34982417 34982649 + 13.3 0.000 promoter-TSS (NR_151701) promoter-TSS (NR_151701) 33 NR_151701 100506157 NR_151701 SRP54-AS1 - SRP54 antisense RNA 1 (head to head) ncRNA chr2-951 chr2 52345811 52346043 + 13.3 0.000 intron (NR_135237, intron 8 of 10) intron (NR_135237, intron 8 of 10) -24721 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr21-86 chr21 15340840 15341072 + 13.3 0.000 Intergenic L2b|LINE|L2 -275956 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr1-1292 chr1 26450055 26450287 + 13.3 0.000 intron (NM_205861, intron 6 of 8) AluJr|SINE|Alu 17366 NR_125952 101928324 Hs.663256 NR_125952 LOC101928324 - uncharacterized LOC101928324 ncRNA chr1-413 chr1 53442552 53442784 + 13.3 0.000 Intergenic MSTA|LTR|ERVL-MaLR -2648 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr5-448 chr5 146432003 146432235 + 13.3 0.000 Intergenic AluSp|SINE|Alu -15214 NM_006706 10915 Hs.443465 NM_006706 ENSG00000113649 TCERG1 CA150|TAF2S|Urn1 transcription elongation regulator 1 protein-coding chr4-355 chr4 76950533 76950765 + 13.3 0.000 intron (NM_018243, intron 1 of 9) CpG-21283 897 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr20-277 chr20 43808673 43808905 + 13.3 0.000 Intergenic AluSx|SINE|Alu -81787 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding chr8-435 chr8 13786267 13786499 + 13.3 0.000 Intergenic Intergenic 156693 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr16-601 chr16 30683853 30684085 + 13.3 0.000 Intergenic AluJr|SINE|Alu 14502 NM_001256932 730183 Hs.535456 NM_001256932 ENSG00000261840 LOC730183 - uncharacterized LOC730183 protein-coding chr10-722 chr10 84469930 84470162 + 13.3 0.000 intron (NM_018999, intron 7 of 10) intron (NM_018999, intron 7 of 10) 44877 NM_001284242 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr3-526 chr3 110527374 110527606 + 13.3 0.000 Intergenic Intergenic 542469 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA chr11-825 chr11 47356387 47356619 + 13.3 0.000 intron (NM_001080547, intron 4 of 4) intron (NM_001080547, intron 4 of 4) -3801 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chr5-576 chr5 16309564 16309796 + 13.3 0.000 Intergenic Intergenic 129439 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr10-621 chr10 18354628 18354860 + 13.3 0.000 intron (NM_201590, intron 1 of 12) intron (NM_201590, intron 1 of 12) 14035 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr9-515 chr9 31137272 31137504 + 13.3 0.000 Intergenic Intergenic 244102 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA chr19-552 chr19 1082647 1082879 + 13.3 0.000 intron (NM_012292, intron 19 of 22) CpG-12984 6129 NM_001282334 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr10-280 chr10 62817968 62818200 + 13.3 0.000 intron (NM_001136178, intron 2 of 3) CpG-2954 1083 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding chr7-502 chr7 77563841 77564073 + 13.3 0.000 intron (NM_001131009, intron 1 of 16) AluSz|SINE|Alu 25914 NM_001131008 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr12-753 chr12 125065114 125065346 + 13.3 0.000 promoter-TSS (NM_001319840) promoter-TSS (NM_001319840) -205 NM_001319839 65985 Hs.656073 NM_023928 ENSG00000081760 AACS ACSF1|SUR-5 acetoacetyl-CoA synthetase protein-coding chr3-537 chr3 120032415 120032647 + 13.1 0.000 intron (NM_002093, intron 1 of 11) MER33|DNA|hAT-Charlie 52117 NR_162125 113839522 NR_162125 MIR6529 - microRNA 6529 ncRNA chr6-602 chr6 137340078 137340310 + 13.1 0.000 Intergenic Intergenic -120764 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr3-520 chr3 75665589 75665821 + 13.1 0.000 exon (NM_001124759, exon 4 of 4) exon (NM_001124759, exon 4 of 4) 1514 NM_001124759 100288801 NM_001124759 ENSG00000172969 FRG2C - FSHD region gene 2 family member C protein-coding chr2-1158 chr2 239655033 239655265 + 13.1 0.000 Intergenic Tigger4|DNA|TcMar-Tigger -107711 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr22-432 chr22 46130327 46130559 + 13.1 0.000 Intergenic Intergenic 16757 NR_029479 406884 NR_029479 ENSG00000284520 MIRLET7B LET7B|MIRNLET7B|hsa-let-7b|let-7b microRNA let-7b ncRNA chr2-402 chr2 200509998 200510230 + 13.1 0.000 promoter-TSS (NM_152387) promoter-TSS (NM_152387) -46 NM_152387 130535 Hs.605775 NM_152387 ENSG00000155729 KCTD18 6530404F10Rik potassium channel tetramerization domain containing 18 protein-coding chr16-406 chr16 3672454 3672686 + 13.1 0.000 intron (NM_001272049, intron 9 of 16) intron (NM_001272049, intron 9 of 16) 17866 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr4-218 chr4 94207939 94208171 + 13.1 0.000 promoter-TSS (NR_045644) promoter-TSS (NR_045644) -29 NR_045644 56916 Hs.410406 NM_020159 ENSG00000163104 SMARCAD1 ADERM|BASNS|ETL1|HEL1|HRZ SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding chr5-446 chr5 139652004 139652236 + 13.1 0.000 intron (NM_001317205, intron 1 of 2) intron (NM_001317205, intron 1 of 2) 1131 NM_001317205 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr12-351 chr12 53495506 53495738 + 13.1 0.000 intron (NM_006301, intron 1 of 14) AluJb|SINE|Alu 3836 NM_006301 7786 Hs.713539 NM_006301 ENSG00000139625 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding chr5-135 chr5 81383937 81384169 + 13.1 0.000 intron (NM_130767, intron 2 of 14) Tigger3b|DNA|TcMar-Tigger 10081 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chr1-1358 chr1 52567985 52568217 + 13.1 0.000 Intergenic Intergenic -15009 NM_001009881 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding chr13-192 chr13 97069302 97069534 + 13.1 0.000 Intergenic Intergenic -74688 NM_001346195 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding chr9-594 chr9 33381333 33381565 + 13.1 0.000 Intergenic Intergenic 21119 NM_001170 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr6-572 chr6 108012463 108012695 + 13.1 0.000 Intergenic AluJb|SINE|Alu -54371 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr6-649 chr6 170100006 170100238 + 13.1 0.000 Intergenic Intergenic -60520 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chrX-185 chrX 117323543 117323775 + 13.1 0.000 Intergenic L1MA3|LINE|L1 -505799 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr10-685 chr10 69318727 69318959 + 13.1 0.000 promoter-TSS (NM_000188) promoter-TSS (NM_000188) -4 NM_001322367 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr1-999 chr1 175097426 175097658 + 13.1 0.000 exon (NM_022093, exon 8 of 19) exon (NM_022093, exon 8 of 19) 29709 NM_022093 63923 Hs.156369 NM_022093 ENSG00000120332 TNN TN-W tenascin N protein-coding chr10-243 chr10 30603294 30603526 + 13.1 0.000 Intergenic Intergenic 26343 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr7-703 chr7 42912016 42912248 + 13.1 0.000 promoter-TSS (NM_001363436) promoter-TSS (NM_001363436) -42 NM_001099858 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding chr9-744 chr9 136204943 136205175 + 13.1 0.000 promoter-TSS (NM_178138) promoter-TSS (NM_178138) 69 NM_178138 8022 Hs.148427 NM_014564 ENSG00000107187 LHX3 CPHD3|LIM3|M2-LHX3 LIM homeobox 3 protein-coding chr15-475 chr15 93192034 93192266 + 13.1 0.000 Intergenic L1MB2|LINE|L1 -13916 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr9-399 chr9 8430235 8430467 + 13.1 0.000 intron (NM_130392, intron 20 of 30) AluJb|SINE|Alu 303595 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr15-360 chr15 38130800 38131032 + 13.1 0.000 Intergenic Intergenic -57926 NR_147200 107984773 Hs.285193 NR_147199 ENSG00000236914 LINC01852 - long intergenic non-protein coding RNA 1852 ncRNA chr19-588 chr19 11573140 11573372 + 13.1 0.000 Intergenic AluSc5|SINE|Alu 4389 NM_001611 54 Hs.1211 NM_001611 ENSG00000102575 ACP5 HPAP|TRACP5a|TRACP5b|TRAP|TrATPase acid phosphatase 5, tartrate resistant protein-coding chr12-627 chr12 49910335 49910567 + 13.1 0.000 non-coding (NR_026948, exon 3 of 3) non-coding (NR_026948, exon 3 of 3) 1412 NR_146570 283332 Hs.127688 NR_026948 ENSG00000258135 LINC02396 - long intergenic non-protein coding RNA 2396 ncRNA chr5-604 chr5 50606816 50607048 + 13.1 0.000 Intergenic Intergenic -58999 NM_001178055 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr10-508 chr10 125255449 125255681 + 13.1 0.000 Intergenic AluSx|SINE|Alu -94535 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr14-486 chr14 104718836 104719068 + 13.1 0.000 3' UTR (NM_022489, exon 23 of 23) 3' UTR (NM_022489, exon 23 of 23) -5245 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr2-698 chr2 184597740 184597972 + 13.1 0.000 promoter-TSS (NM_194250) promoter-TSS (NM_194250) -673 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr3-933 chr3 197078021 197078253 + 13.1 0.000 intron (NM_001366207, intron 17 of 24) AluJr|SINE|Alu -48320 NM_033316 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chrX-153 chrX 147304481 147304713 + 13.1 0.000 Intergenic (CCACAGG)n|Simple_repeat|Simple_repeat -19869 NR_030239 574517 NR_030239 ENSG00000207866 MIR514A2 MIR514-2|MIRN514-2|hsa-mir-514a-2 microRNA 514a-2 ncRNA chr7-708 chr7 45402897 45403129 + 13.1 0.000 Intergenic LTR26|LTR|ERV1 -171127 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr1-1354 chr1 49225567 49225799 + 13.1 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -31728 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr7-825 chr7 128433142 128433374 + 13.1 0.000 Intergenic Intergenic -22572 NM_001098786 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr8-212 chr8 53657832 53658064 + 13.1 0.000 Intergenic Intergenic -133983 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr3-630 chr3 52705039 52705271 + 13.1 0.000 promoter-TSS (NM_014041) promoter-TSS (NM_014041) 928 NM_001278281 55830 Hs.297304 NM_018446 ENSG00000016864 GLT8D1 AD-017|MSTP139 glycosyltransferase 8 domain containing 1 protein-coding chr1-1399 chr1 86430119 86430351 + 13.1 0.000 intron (NM_006536, intron 3 of 13) intron (NM_006536, intron 3 of 13) 6064 NM_006536 9635 Hs.241551 NM_006536 ENSG00000137975 CLCA2 CACC|CACC3|CLCRG2|CaCC-3 chloride channel accessory 2 protein-coding chr12-469 chr12 118221521 118221753 + 13.1 0.000 intron (NM_001346490, intron 10 of 21) AluY|SINE|Alu -31102 NM_001346496 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr7-607 chr7 108802472 108802704 + 13.1 0.000 Intergenic MER51C|LTR|ERV1 81999 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr18-234 chr18 59422990 59423222 + 13.1 0.000 Intergenic Intergenic -63841 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chrX-36 chrX 18900864 18901096 + 13.1 0.000 intron (NM_000292, intron 27 of 32) intron (NM_000292, intron 27 of 32) 10684 NR_029379 100132163 Hs.607628 NR_029379 PHKA2-AS1 - PHKA2 antisense RNA 1 ncRNA chr1-915 chr1 45831686 45831918 + 13.1 0.000 intron (NM_001324320, intron 3 of 29) AluSz|SINE|Alu 28189 NM_001319245 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr15-372 chr15 42154909 42155141 + 13.1 0.000 intron (NR_033151, intron 1 of 18) (CA)n|Simple_repeat|Simple_repeat 1611 NR_033151 255189 Hs.231873 NM_213600 ENSG00000168907 PLA2G4F PLA2G4FZ phospholipase A2 group IVF protein-coding chr13-322 chr13 87671830 87672062 + 13.1 0.000 promoter-TSS (NR_033829) promoter-TSS (NR_033829) -669 NM_015567 26050 Hs.591208 NM_015567 ENSG00000165300 SLITRK5 LRRC11|bA364G4.2 SLIT and NTRK like family member 5 protein-coding chr12-748 chr12 124682339 124682571 + 13.1 0.000 Intergenic Intergenic -114843 NM_006312 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr18-218 chr18 47614117 47614349 + 13.1 0.000 Intergenic LTR16A|LTR|ERVL 233737 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr17-249 chr17 53498948 53499180 + 13.1 0.000 Intergenic L2a|LINE|L2 -323863 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr22-445 chr22 50295325 50295557 + 13.1 0.000 intron (NM_012401, intron 1 of 36) MIR|SINE|MIR 12205 NM_012401 23654 Hs.3989 NM_012401 ENSG00000196576 PLXNB2 MM1|Nbla00445|PLEXB2|dJ402G11.3 plexin B2 protein-coding chr18-251 chr18 79366192 79366424 + 13.1 0.000 intron (NR_148360, intron 27 of 31) intron (NR_148360, intron 27 of 31) -29622 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr2-1156 chr2 239234271 239234503 + 13.1 0.000 intron (NM_006037, intron 3 of 26) intron (NM_006037, intron 3 of 26) -38930 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA chr3-495 chr3 47261416 47261648 + 13.1 0.000 intron (NM_001134878, intron 10 of 21) intron (NM_001134878, intron 10 of 21) -10923 NR_145712 109617025 NR_145712 SNORD13J - small nucleolar RNA, C/D box 13J snoRNA chr2-858 chr2 232517504 232517736 + 13.1 0.000 Intergenic AluSx1|SINE|Alu -2843 NM_001195129 646960 Hs.570310 NM_001195129 ENSG00000237412 PRSS56 MCOP6 serine protease 56 protein-coding chr3-336 chr3 195496367 195496599 + 13.1 0.000 Intergenic Intergenic 46842 NM_001291505 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chrX-281 chrX 132231478 132231710 + 13.1 0.000 intron (NR_110410, intron 1 of 2) MSTA|LTR|ERVL-MaLR -12114 NR_073150 57826 Hs.119889 NM_021183 ENSG00000123728 RAP2C - RAP2C, member of RAS oncogene family protein-coding chr22-244 chr22 39451808 39452040 + 13.1 0.000 Intergenic AluSc|SINE|Alu -5088 NM_002409 4248 Hs.276808 NM_002409 ENSG00000128268 MGAT3 GNT-III|GNT3 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase protein-coding chrX-179 chrX 54755451 54755683 + 13.1 0.000 intron (NM_198510, intron 8 of 12) L2a|LINE|L2 42688 NM_198510 347365 Hs.454272 NM_198510 ENSG00000102313 ITIH6 ITIH5L|UNQ6369|dJ14O9.1 inter-alpha-trypsin inhibitor heavy chain family member 6 protein-coding chr19-562 chr19 2464505 2464737 + 13.1 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -2436 NR_134931 101928602 Hs.541407 NR_134931 ENSG00000267201 LINC01775 - long intergenic non-protein coding RNA 1775 ncRNA chr19-672 chr19 5667351 5667583 + 13.1 0.000 intron (NM_001201340, intron 18 of 19) intron (NM_001201340, intron 18 of 19) 12771 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr7-574 chr7 15848290 15848522 + 13.1 0.000 Intergenic Intergenic 160028 NR_110094 101927524 Hs.386790 NR_110094 LINC02587 MEOX2-AS1 long intergenic non-protein coding RNA 2587 ncRNA chr6-101 chr6 12880104 12880336 + 13.1 0.000 intron (NM_001322308, intron 3 of 13) MIR|SINE|MIR -77136 NM_001322311 221692 Hs.436996 NM_030948 ENSG00000112137 PHACTR1 EIEE70|RPEL|RPEL1|dJ257A7.2 phosphatase and actin regulator 1 protein-coding chr1-1330 chr1 38451646 38451878 + 13.1 0.000 Intergenic Intergenic -23434 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA chrX-252 chrX 78277059 78277291 + 13.1 0.000 intron (NM_001282186, intron 1 of 1) L1P4e|LINE|L1 50436 NM_001282187 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding chr20-249 chr20 992225 992457 + 13.1 0.000 intron (NM_001029871, intron 1 of 4) MIRc|SINE|MIR 9970 NM_001029871 343637 Hs.444980 NM_001029871 ENSG00000101282 RSPO4 C20orf182|CRISTIN4 R-spondin 4 protein-coding chr1-1402 chr1 87835019 87835251 + 13.1 0.000 Intergenic Intergenic -463480 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr1-1538 chr1 201759491 201759723 + 13.1 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 19707 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr6-296 chr6 142947426 142947658 + 13.1 0.000 Intergenic CpG-24066 -2366 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding chr5-736 chr5 170401657 170401889 + 13.1 0.000 intron (NR_109899, intron 1 of 2) AluJb|SINE|Alu 12280 NR_109899 101928033 Hs.709167 NR_109899 ENSG00000253647 CTD-2270F17.1 - uncharacterized LOC101928033 ncRNA chr15-421 chr15 69392934 69393166 + 13.1 0.000 intron (NM_001104554, intron 6 of 8) intron (NM_001104554, intron 6 of 8) -21299 NM_001367804 9493 Hs.270845 NM_004856 ENSG00000137807 KIF23 CHO1|KNSL5|MKLP-1|MKLP1 kinesin family member 23 protein-coding chr1-1490 chr1 165647532 165647764 + 13.1 0.000 intron (NM_004528, intron 1 of 5) intron (NM_004528, intron 1 of 5) 16414 NM_004528 4259 Hs.191734 NM_004528 ENSG00000143198 MGST3 GST-III microsomal glutathione S-transferase 3 protein-coding chr6-188 chr6 106367580 106367812 + 13.1 0.000 intron (NM_001371242, intron 1 of 21) AluJo|SINE|Alu 6979 NM_001371242 chr6-478 chr6 169310241 169310473 + 13.1 0.000 Intergenic L1MA4|LINE|L1 -56243 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr19-511 chr19 274633 274865 + 13.1 0.000 Intergenic AluJo|SINE|Alu 16390 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr1-1113 chr1 52698080 52698312 + 13.1 0.000 intron (NM_023077, intron 1 of 2) CpG 151 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr3-899 chr3 180265806 180266038 + 13.1 0.000 Intergenic Intergenic -148251 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA chr18-209 chr18 32784314 32784546 + 13.1 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 -11407 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr3-154 chr3 4978825 4979057 + 13.1 0.000 promoter-TSS (NM_003670) promoter-TSS (NM_003670) -496 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|Clast5|DEC1|HLHB2|SHARP-2|SHARP2|STRA13|Stra14 basic helix-loop-helix family member e40 protein-coding chr8-487 chr8 42300465 42300697 + 13.1 0.000 intron (NR_033818, intron 5 of 21) intron (NR_033818, intron 5 of 21) 29279 NR_040009 3551 Hs.597664 NM_001556 ENSG00000104365 IKBKB IKK-beta|IKK2|IKKB|IMD15|IMD15A|IMD15B|NFKBIKB inhibitor of nuclear factor kappa B kinase subunit beta protein-coding chr2-303 chr2 32301888 32302120 + 13.1 0.000 intron (NM_032312, intron 5 of 5) AluSx|SINE|Alu 24100 NM_032312 84272 Hs.468099 NM_032312 ENSG00000119820 YIPF4 FinGER4|Nbla11189 Yip1 domain family member 4 protein-coding GL000225.1-26 GL000225.1 621 853 + 13.1 0.000 NA NA NA NA chr1-853 chr1 19288788 19289020 + 13.1 0.000 promoter-TSS (NM_012067) promoter-TSS (NM_012067) -134 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr11-398 chr11 90984276 90984508 + 13.1 0.000 Intergenic AluSz|SINE|Alu -115190 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr11-982 chr11 125651137 125651369 + 13.1 0.000 intron (NM_001244846, intron 11 of 11) L1M4|LINE|L1 24897 NM_001274 1111 Hs.24529 NM_001274 ENSG00000149554 CHEK1 CHK1 checkpoint kinase 1 protein-coding chr1-1466 chr1 156178009 156178241 + 13.1 0.000 TTS (NM_001193301) TTS (NM_001193301) -15807 NR_104411 9673 Hs.532375 NM_014655 ENSG00000160785 SLC25A44 - solute carrier family 25 member 44 protein-coding chr1-1596 chr1 227796036 227796268 + 13.1 0.000 Intergenic Intergenic -19565 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr4-280 chr4 186144128 186144360 + 13.1 0.000 promoter-TSS (NM_001006655) promoter-TSS (NM_001006655) -43 NM_001006655 25854 Hs.744961 NM_015398 ENSG00000109794 FAM149A MST119|MSTP119 family with sequence similarity 149 member A protein-coding chr1-964 chr1 147243073 147243305 + 13.1 0.000 promoter-TSS (NM_001348452) promoter-TSS (NM_001348452) 47 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr11-881 chr11 68106428 68106660 + 13.1 0.000 intron (NM_001277, intron 1 of 11) AluJr|SINE|Alu 14844 NM_001277 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr15-343 chr15 92602717 92602949 + 13.1 0.000 Intergenic Intergenic -30570 NR_021493 100144604 Hs.245476 NR_021493 ENSG00000258647 LINC00930 - long intergenic non-protein coding RNA 930 ncRNA chr9-689 chr9 126696080 126696312 + 13.1 0.000 intron (NM_001174147, intron 7 of 7) intron (NM_001174147, intron 7 of 7) 81753 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr9-741 chr9 136009661 136009893 + 13.1 0.000 3' UTR (NM_144653, exon 6 of 6) 3' UTR (NM_144653, exon 6 of 6) -48404 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr1-1100 chr1 34169376 34169608 + 13.1 0.000 intron (NM_032884, intron 1 of 6) intron (NM_032884, intron 1 of 6) 2499 NM_032884 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr22-333 chr22 30607117 30607349 + 13.1 0.000 promoter-TSS (NM_001282328) promoter-TSS (NM_001282328) 59 NM_000355 6948 Hs.417948 NM_000355 ENSG00000185339 TCN2 D22S676|D22S750|II|TC|TC II|TC-2|TC2|TCII transcobalamin 2 protein-coding chr3-924 chr3 194141271 194141503 + 13.1 0.000 Intergenic CpG 5239 NM_005524 3280 Hs.250666 NM_005524 ENSG00000114315 HES1 HES-1|HHL|HRY|bHLHb39 hes family bHLH transcription factor 1 protein-coding chr12-755 chr12 128100914 128101146 + 13.1 0.000 intron (NR_104647, intron 3 of 4) MLT1F|LTR|ERVL-MaLR 17111 NR_104647 100996679 Hs.539127 NR_104647 ENSG00000256551 LINC02369 - long intergenic non-protein coding RNA 2369 ncRNA chr6-603 chr6 138288580 138288812 + 13.1 0.000 intron (NM_020340, intron 17 of 33) AluSx1|SINE|Alu -70206 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr1-975 chr1 153633896 153634128 + 13.1 0.000 promoter-TSS (NM_001317077) promoter-TSS (NM_001317077) 30 NM_001317077 26097 Hs.611057 NM_015607 ENSG00000160679 CHTOP C10orf77|C1orf77|FL-SRAG|FOP|SRAG|SRAG-3|SRAG-5|pp7704 chromatin target of PRMT1 protein-coding chr7-597 chr7 87600686 87600918 + 13.1 0.000 promoter-TSS (NM_001348946) promoter-TSS (NM_001348946) 82 NM_001348946 5243 Hs.489033 NM_000927 ENSG00000085563 ABCB1 ABC20|CD243|CLCS|GP170|MDR1|P-GP|PGY1 ATP binding cassette subfamily B member 1 protein-coding chr1-1568 chr1 212696829 212697061 + 13.1 0.000 intron (NM_018664, intron 2 of 2) intron (NM_018664, intron 2 of 2) 2895 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr12-513 chr12 52114592 52114824 + 13.1 0.000 Intergenic SATR2|Satellite|Satellite 21139 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr6-586 chr6 119720609 119720841 + 13.1 0.000 intron (NR_134600, intron 2 of 3) AluJo|SINE|Alu 170917 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA chr5-683 chr5 133993991 133994223 + 13.1 0.000 intron (NM_003374, intron 1 of 8) intron (NM_003374, intron 1 of 8) 10661 NR_036625 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr1-1237 chr1 9456013 9456245 + 13.1 0.000 Intergenic Intergenic -27133 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr19-687 chr19 14428690 14428922 + 12.9 0.000 Intergenic AluJb|SINE|Alu -4500 NM_002741 5585 Hs.466044 NM_002741 ENSG00000123143 PKN1 DBK|PAK-1|PAK1|PKN|PKN-ALPHA|PRK1|PRKCL1 protein kinase N1 protein-coding chr17-627 chr17 17303525 17303757 + 12.9 0.000 exon (NM_020201, exon 1 of 5) exon (NM_020201, exon 1 of 5) 268 NM_020201 56953 Hs.513977 NM_020201 ENSG00000205309 NT5M dNT-2|dNT2|mdN 5',3'-nucleotidase, mitochondrial protein-coding chr3-521 chr3 83497966 83498198 + 12.9 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 1371493 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr11-676 chr11 12254689 12254921 + 12.9 0.000 intron (NM_001282666, intron 16 of 18) intron (NM_001282666, intron 16 of 18) -32095 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr4-470 chr4 170089672 170089904 + 12.9 0.000 5' UTR (NM_016228, exon 1 of 13) 5' UTR (NM_016228, exon 1 of 13) 168 NM_016228 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chr1-1389 chr1 84620858 84621090 + 12.9 0.000 promoter-TSS (NR_125761) promoter-TSS (NR_125761) 57 NR_125761 103695366 Hs.576097 NR_125761 LINC01461 TCONS_00001552 long intergenic non-protein coding RNA 1461 ncRNA chr7-795 chr7 102287433 102287665 + 12.9 0.000 intron (NM_001359230, intron 1 of 8) CpG 681 NM_001359230 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr6-264 chr6 16865499 16865731 + 12.9 0.000 Intergenic Intergenic -104125 NM_000332 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr20-363 chr20 43416105 43416337 + 12.9 0.000 Intergenic L1M2c|LINE|L1 -41675 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding chr20-387 chr20 58309157 58309389 + 12.9 0.000 promoter-TSS (NM_020673) promoter-TSS (NM_020673) 166 NR_003505 55370 Hs.473179 NM_018498 PPP4R1L C20orf192|PPP4R1P1|PRO1085 protein phosphatase 4 regulatory subunit 1 like (pseudogene) pseudo chr10-581 chr10 121090579 121090811 + 12.9 0.000 Intergenic Intergenic 239333 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr1-91 chr1 46230455 46230687 + 12.9 0.000 Intergenic AluSx|SINE|Alu -10266 NM_001243766 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr9-602 chr9 35856628 35856860 + 12.9 0.000 TTS (NM_001363622) TTS (NM_001363622) 13657 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding chr17-301 chr17 23583339 23583571 + 12.9 0.000 Intergenic ALR/Alpha|Satellite|centr 1060344 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr1-1141 chr1 109664106 109664338 + 12.9 0.000 intron (NM_147148, intron 7 of 7) L1ME4a|LINE|L1 -3800 NM_001142368 2946 Hs.279837 NM_000848 ENSG00000213366 GSTM2 GST4|GSTM|GSTM2-2|GTHMUS glutathione S-transferase mu 2 protein-coding chr10-627 chr10 24428782 24429014 + 12.9 0.000 intron (NM_019590, intron 3 of 20) L2a|LINE|L2 -20516 NM_001321681 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr1-1451 chr1 153679238 153679470 + 12.9 0.000 exon (NM_000906, exon 1 of 22) exon (NM_000906, exon 1 of 22) 666 NM_000906 4881 Hs.490330 NM_000906 ENSG00000169418 NPR1 ANPRA|ANPa|GUC2A|GUCY2A|NPRA natriuretic peptide receptor 1 protein-coding chr10-670 chr10 61721603 61721835 + 12.9 0.000 intron (NM_173554, intron 4 of 6) LTR33|LTR|ERVL 58758 NM_173554 219621 Hs.673160 NM_173554 ENSG00000183346 CABCOCO1 C10orf107 ciliary associated calcium binding coiled-coil 1 protein-coding chr20-237 chr20 48619043 48619275 + 12.9 0.000 Intergenic AluJo|SINE|Alu 208840 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr21-163 chr21 46598906 46599138 + 12.9 0.000 3' UTR (NM_006272, exon 3 of 3) 3' UTR (NM_006272, exon 3 of 3) 6060 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr1-1383 chr1 77253443 77253675 + 12.9 0.000 Intergenic L1M1|LINE|L1 -28460 NM_174858 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding chr13-213 chr13 31161447 31161679 + 12.9 0.000 exon (NM_001349704, exon 1 of 19) exon (NM_001349704, exon 1 of 19) 341 NM_001349704 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr6-428 chr6 35243625 35243857 + 12.9 0.000 exon (NM_152753, exon 16 of 22) exon (NM_152753, exon 16 of 22) -15994 NM_003427 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr8-190 chr8 118111797 118112029 + 12.9 0.000 promoter-TSS (NM_000127) promoter-TSS (NM_000127) -94 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding chr10-632 chr10 29968847 29969079 + 12.9 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 90623 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr18-93 chr18 53699639 53699871 + 12.9 0.000 Intergenic Intergenic -118696 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA chr1-1306 chr1 29230850 29231082 + 12.9 0.000 promoter-TSS (NM_001024732) promoter-TSS (NM_001024732) -32 NR_146214 51102 Hs.183646 NM_016011 ENSG00000116353 MECR CGI-63|DYTOABG|ETR1|FASN2B|NRBF1 mitochondrial trans-2-enoyl-CoA reductase protein-coding GL000225.1-10 GL000225.1 6587 6819 + 12.9 0.000 NA NA NA NA chr13-222 chr13 44396303 44396535 + 12.9 0.000 intron (NR_144535, intron 3 of 3) intron (NR_144535, intron 3 of 3) 9565 NR_104174 400128 Hs.438480 NR_104174 ENSG00000237361 TUSC8 LINC01071|XLOC_010588 tumor suppressor candidate 8 ncRNA chr2-449 chr2 46804190 46804422 + 12.9 0.000 Intergenic Intergenic -12362 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr7-286 chr7 77696998 77697230 + 12.9 0.000 promoter-TSS (NR_134251) promoter-TSS (NR_134251) 231 NR_038361 100505854 Hs.72451 NR_038361 ENSG00000214293 APTR RSBN1L-AS1 Alu-mediated CDKN1A/p21 transcriptional regulator ncRNA chr4-438 chr4 63540833 63541065 + 12.9 0.000 Intergenic L1PA15-16|LINE|L1 868501 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr17-507 chr17 3004351 3004583 + 12.9 0.000 intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -38572 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr21-98 chr21 42280743 42280975 + 12.9 0.000 intron (NM_207627, intron 6 of 15) intron (NM_207627, intron 6 of 15) 34737 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr17-729 chr17 13266523 13266755 + 12.9 0.000 Intergenic Intergenic 40121 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr1-404 chr1 22122587 22122819 + 12.9 0.000 intron (NM_030761, intron 2 of 4) intron (NM_030761, intron 2 of 4) 20394 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr17-689 chr17 80475024 80475256 + 12.9 0.000 intron (NM_002522, intron 2 of 4) intron (NM_002522, intron 2 of 4) 1467 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr17-178 chr17 24188133 24188365 + 12.9 0.000 Intergenic ALR/Alpha|Satellite|centr 1665138 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr17-851 chr17 77078759 77078991 + 12.9 0.000 Intergenic AluSx1|SINE|Alu -9768 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr7-629 chr7 157098838 157099070 + 12.9 0.000 Intergenic AluSx4|SINE|Alu -39972 NM_014671 9690 Hs.118351 NM_014671 ENSG00000009335 UBE3C HECTH2 ubiquitin protein ligase E3C protein-coding chr3-803 chr3 84724601 84724833 + 12.9 0.000 intron (NR_033860, intron 11 of 20) MER44D|DNA|TcMar-Tigger 144858 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA chr12-518 chr12 57852922 57853154 + 12.9 0.000 Intergenic Intergenic -6309 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr1-870 chr1 24863123 24863355 + 12.9 0.000 Intergenic Intergenic 56177 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr5-438 chr5 134497412 134497644 + 12.9 0.000 Intergenic AluSx|SINE|Alu -9024 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chrX-261 chrX 103919091 103919323 + 12.9 0.000 5' UTR (NM_001350211, exon 1 of 4) 5' UTR (NM_001350211, exon 1 of 4) 311 NM_001350213 286527 Hs.675540 NM_194324 ENSG00000158427 TMSB15B TMSB15A|TMSL8|TMSNB|Tbeta15b thymosin beta 15B protein-coding chr6-260 chr6 7157001 7157233 + 12.9 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 49156 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr19-613 chr19 18899618 18899850 + 12.9 0.000 intron (NM_001330469, intron 10 of 10) intron (NM_001330469, intron 10 of 10) -3007 NM_001290265 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr2-844 chr2 207676935 207677167 + 12.9 0.000 intron (NR_135566, intron 3 of 3) intron (NR_135566, intron 3 of 3) 14621 NR_135567 102724714 Hs.443475 NR_135566 ENSG00000224137 LINC01857 - long intergenic non-protein coding RNA 1857 ncRNA chr17-674 chr17 76138697 76138929 + 12.9 0.000 intron (NM_001454, intron 2 of 2) intron (NM_001454, intron 2 of 2) -1743 NR_040017 100507218 Hs.654866 NR_040017 ENSG00000267128 RNF157-AS1 - RNF157 antisense RNA 1 ncRNA chr12-725 chr12 117295449 117295681 + 12.9 0.000 intron (NM_000620, intron 3 of 28) intron (NM_000620, intron 3 of 28) 9487 NM_001204213 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr3-834 chr3 123800150 123800382 + 12.9 0.000 intron (NM_001321309, intron 3 of 32) intron (NM_001321309, intron 3 of 32) 84066 NM_053026 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr9-423 chr9 70897978 70898210 + 12.9 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -29042 NM_206944 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr7-758 chr7 75665445 75665677 + 12.9 0.000 intron (NM_005338, intron 1 of 30) AluSz6|SINE|Alu 73380 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr10-255 chr10 79317677 79317909 + 12.9 0.000 Intergenic MER112|DNA|hAT-Charlie -29676 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr7-254 chr7 2452209 2452441 + 12.9 0.000 Intergenic Intergenic 24058 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr20-372 chr20 49149806 49150038 + 12.9 0.000 intron (NM_004602, intron 5 of 13) intron (NM_004602, intron 5 of 13) 38448 NM_001322928 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding chr2-704 chr2 200964275 200964507 + 12.9 0.000 promoter-TSS (NM_006190) promoter-TSS (NM_006190) -731 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr1-1314 chr1 31204252 31204484 + 12.9 0.000 intron (NM_024522, intron 1 of 6) intron (NM_024522, intron 1 of 6) 35519 NM_024522 79570 Hs.470259 NM_024522 ENSG00000084628 NKAIN1 FAM77C sodium/potassium transporting ATPase interacting 1 protein-coding chr13-316 chr13 79248597 79248829 + 12.9 0.000 Intergenic L1ME1|LINE|L1 157508 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding chr5-207 chr5 73120611 73120843 + 12.9 0.000 intron (NM_173490, intron 1 of 3) CpG 152 NM_173490 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr2-1002 chr2 104769004 104769236 + 12.7 0.000 Intergenic Intergenic -11401 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA chr1-510 chr1 205788245 205788477 + 12.7 0.000 TTS (NM_173854) TTS (NM_173854) -12879 NM_003929 8934 Hs.115325 NM_003929 ENSG00000117280 RAB29 RAB7L|RAB7L1 RAB29, member RAS oncogene family protein-coding chr3-607 chr3 15541365 15541597 + 12.7 0.000 Intergenic Intergenic -19775 NM_080539 8292 Hs.146735 NM_005677 ENSG00000206561 COLQ CMS5|EAD collagen like tail subunit of asymmetric acetylcholinesterase protein-coding chr2-1072 chr2 178324191 178324423 + 12.7 0.000 intron (NM_001201480, intron 4 of 25) intron (NM_001201480, intron 4 of 25) 4065 NM_145739 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chrX-196 chrX 153499020 153499252 + 12.7 0.000 intron (NM_001711, intron 1 of 7) MIR3|SINE|MIR -3671 NR_073156 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr19-520 chr19 5753485 5753717 + 12.7 0.000 intron (NM_152784, intron 12 of 21) AluJb|SINE|Alu 31145 NM_001134316 163154 Hs.631838 NM_153359 ENSG00000212123 PRR22 - proline rich 22 protein-coding chr1-1179 chr1 202618414 202618646 + 12.7 0.000 intron (NM_177402, intron 1 of 8) intron (NM_177402, intron 1 of 8) 24923 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr7-249 chr7 1398145 1398377 + 12.7 0.000 Intergenic FLAM_C|SINE|Alu 61209 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr11-749 chr11 130874010 130874242 + 12.7 0.000 Intergenic AluJo|SINE|Alu -3879 NR_125382 103611081 Hs.430300 NR_125382 ENSG00000255455 LOC103611081 - uncharacterized LOC103611081 ncRNA chr4-488 chr4 1913613 1913845 + 12.7 0.000 intron (NM_133334, intron 2 of 8) LTR13|LTR|ERVK 13103 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr11-921 chr11 81264868 81265100 + 12.7 0.000 Intergenic L1MC4|LINE|L1 -502181 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr15-182 chr15 66706458 66706690 + 12.7 0.000 intron (NM_005585, intron 1 of 3) intron (NM_005585, intron 1 of 3) 4338 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr12-350 chr12 53345964 53346196 + 12.7 0.000 Intergenic Intergenic -1287 NM_001300837 121340 Hs.209402 NM_152860 ENSG00000170374 SP7 OI11|OI12|OSX|osterix Sp7 transcription factor protein-coding chr4-613 chr4 122541767 122541999 + 12.7 0.000 Intergenic LTR1D1|LTR|ERV1 -77100 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr10-184 chr10 35810287 35810519 + 12.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 32101 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr19-752 chr19 2752932 2753164 + 12.7 0.000 Intergenic MER20|DNA|hAT-Charlie -12972 NM_213568 29985 Hs.515046 NM_144564 ENSG00000141873 SLC39A3 ZIP-3|ZIP3 solute carrier family 39 member 3 protein-coding chr16-390 chr16 580494 580726 + 12.7 0.000 intron (NM_148920, intron 8 of 9) intron (NM_148920, intron 8 of 9) -8747 NM_001172663 57799 Hs.459630 NM_021168 ENSG00000197562 RAB40C RARL|RASL8C RAB40C, member RAS oncogene family protein-coding chr12-521 chr12 63095395 63095627 + 12.7 0.000 Intergenic LTR102_Mam|LTR|ERVL 57299 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr2-425 chr2 9378341 9378573 + 12.7 0.000 intron (NM_003887, intron 18 of 27) intron (NM_003887, intron 18 of 27) 44134 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chrX-198 chrX 154402329 154402561 + 12.7 0.000 TTS (NM_001303625) TTS (NM_001303625) 2164 NR_000011 26778 Hs.534404 NR_000011 ENSG00000207165 SNORA70 DXS648E|RNU70|U70 small nucleolar RNA, H/ACA box 70 snoRNA chr7-861 chr7 150235210 150235442 + 12.7 0.000 intron (NM_001351028, intron 6 of 9) intron (NM_001351028, intron 6 of 9) -14226 NR_147014 653857 Hs.664579 NM_001164458 ENSG00000106526 ACTR3C ARP11 actin related protein 3C protein-coding chr15-435 chr15 74863476 74863708 + 12.7 0.000 intron (NM_001320778, intron 1 of 9) intron (NM_001320778, intron 1 of 9) 9773 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr19-816 chr19 30296183 30296415 + 12.7 0.000 Intergenic Intergenic -76085 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr9-550 chr9 130558335 130558567 + 12.7 0.000 Intergenic Intergenic 21043 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr22-260 chr22 20081038 20081270 + 12.7 0.000 intron (NM_022720, intron 1 of 13) intron (NM_022720, intron 1 of 13) 913 NM_022720 54487 Hs.643452 NM_022720 ENSG00000128191 DGCR8 C22orf12|DGCRK6|Gy1|pasha DGCR8 microprocessor complex subunit protein-coding chr5-749 chr5 179219794 179220026 + 12.7 0.000 intron (NM_014244, intron 3 of 21) intron (NM_014244, intron 3 of 21) 125551 NM_014244 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr5-556 chr5 674008 674240 + 12.7 0.000 intron (NM_007030, intron 2 of 3) intron (NM_007030, intron 2 of 3) 19228 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chrX-135 chrX 97464184 97464416 + 12.7 0.000 intron (NM_006729, intron 26 of 26) AluY|SINE|Alu 100235 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr11-936 chr11 94885245 94885477 + 12.7 0.000 Intergenic Intergenic 88195 NM_016403 51503 Hs.503597 NM_016403 ENSG00000150316 CWC15 AD002|C11orf5|Cwf15|HSPC148|ORF5 CWC15 spliceosome associated protein homolog protein-coding chr22-52 chr22 18038528 18038760 + 12.7 0.000 TTS (NR_024417) TTS (NR_024417) 9259 NR_024417 100192420 Hs.589947 NR_024417 ENSG00000235295 LINC01634 - long intergenic non-protein coding RNA 1634 ncRNA chr1-1504 chr1 175133043 175133275 + 12.7 0.000 intron (NM_022093, intron 15 of 18) intron (NM_022093, intron 15 of 18) 59617 NM_014656 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr9-736 chr9 135413408 135413640 + 12.7 0.000 Intergenic Intergenic 58725 NR_038969 100506599 Hs.561897 NR_038969 ENSG00000225361 PPP1R26-AS1 - PPP1R26 antisense RNA 1 ncRNA chr2-1084 chr2 191352606 191352838 + 12.7 0.000 intron (NM_012223, intron 7 of 28) intron (NM_012223, intron 7 of 28) 107318 NM_001330237 4430 Hs.439620 NM_012223 ENSG00000128641 MYO1B MMI-alpha|MMIa|MYH-1c|myr1 myosin IB protein-coding chr17-809 chr17 54237564 54237796 + 12.7 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 414753 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding chr16-717 chr16 88742407 88742639 + 12.7 0.000 promoter-TSS (NR_120387) promoter-TSS (NR_120387) -244 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr14-489 chr14 105066048 105066280 + 12.7 0.000 promoter-TSS (NM_013345) promoter-TSS (NM_013345) -734 NM_001278695 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr9-614 chr9 78032276 78032508 + 12.7 0.000 promoter-TSS (NM_002072) promoter-TSS (NM_002072) -581 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr20-380 chr20 52083698 52083930 + 12.7 0.000 TTS (NM_001319146) TTS (NM_001319146) 21670 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr6-130 chr6 17600103 17600335 + 12.7 0.000 promoter-TSS (NM_016255) promoter-TSS (NM_016255) -83 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr18-155 chr18 35809988 35810220 + 12.7 0.000 Intergenic Intergenic 94822 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA chr7-375 chr7 74507982 74508214 + 12.7 0.000 exon (NM_001199207, exon 2 of 27) exon (NM_001199207, exon 2 of 27) 54192 NM_005685 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr15-319 chr15 55411988 55412220 + 12.7 0.000 intron (NM_001198784, intron 1 of 1) AluSz|SINE|Alu -3594 NM_001204451 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding chr16-404 chr16 3013444 3013676 + 12.7 0.000 exon (NM_020982, exon 1 of 1) exon (NM_020982, exon 1 of 1) 637 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr19-486 chr19 40165664 40165896 + 12.7 0.000 Intergenic Intergenic -25646 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr15-225 chr15 90001253 90001485 + 12.7 0.000 promoter-TSS (NM_198526) promoter-TSS (NM_198526) 45 NM_198526 374655 Hs.459311 NM_198526 ENSG00000140548 ZNF710 - zinc finger protein 710 protein-coding chr1-1150 chr1 150339723 150339955 + 12.7 0.000 intron (NR_146769, intron 8 of 15) AluSx|SINE|Alu 18306 NM_004698 9129 Hs.11776 NM_004698 ENSG00000117360 PRPF3 HPRP3|HPRP3P|PRP3|Prp3p|RP18|SNRNP90 pre-mRNA processing factor 3 protein-coding chr15-313 chr15 41822898 41823130 + 12.7 0.000 exon (NM_014994, exon 28 of 31) exon (NM_014994, exon 28 of 31) -5071 NM_005090 8681 Hs.198161 NM_005090 ENSG00000168970 JMJD7-PLA2G4B HsT16992|cPLA2-beta JMJD7-PLA2G4B readthrough protein-coding chr3-604 chr3 14435698 14435930 + 12.7 0.000 intron (NM_001134367, intron 2 of 14) MER102c|DNA|hAT-Charlie 33208 NM_001134368 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr6-123 chr6 120324944 120325176 + 12.7 0.000 Intergenic AluSq2|SINE|Alu 309881 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr16-514 chr16 58000860 58001092 + 12.7 0.000 promoter-TSS (NM_024598) promoter-TSS (NM_024598) -397 NM_024598 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr22-281 chr22 31489119 31489351 + 12.7 0.000 intron (NM_001164502, intron 1 of 16) CpG 321 NM_001164501 56478 Hs.517559 NM_019843 ENSG00000184708 EIF4ENIF1 4E-T|Clast4 eukaryotic translation initiation factor 4E nuclear import factor 1 protein-coding chr10-629 chr10 28111781 28112013 + 12.7 0.000 intron (NR_134518, intron 10 of 16) intron (NR_134518, intron 10 of 16) -38519 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr17-760 chr17 29514807 29515039 + 12.7 0.000 intron (NM_025142, intron 15 of 17) AluJb|SINE|Alu 52114 NM_198147 116236 Hs.106510 NM_198147 ENSG00000168792 ABHD15 - abhydrolase domain containing 15 protein-coding chr7-657 chr7 5499704 5499936 + 12.7 0.000 intron (NM_024963, intron 3 of 4) AluJo|SINE|Alu -3903 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr4-611 chr4 119517305 119517537 + 12.7 0.000 intron (NM_033437, intron 14 of 20) intron (NM_033437, intron 14 of 20) 62638 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr7-591 chr7 69350661 69350893 + 12.7 0.000 Intergenic Intergenic 246847 NR_108105 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr7-872 chr7 155644257 155644489 + 12.7 0.000 promoter-TSS (NM_053043) promoter-TSS (NM_053043) 33 NR_126344 100506302 Hs.87856 NR_126344 ENSG00000216895 LOC100506302 - uncharacterized LOC100506302 ncRNA chr20-47 chr20 18047755 18047987 + 12.7 0.000 intron (NM_001303462, intron 1 of 2) AluSx1|SINE|Alu 10045 NM_021220 58495 Hs.661013 NM_021220 ENSG00000125850 OVOL2 CHED|CHED1|CHED2|EUROIMAGE566589|PPCD1|ZNF339 ovo like zinc finger 2 protein-coding chr11-775 chr11 8766371 8766603 + 12.7 0.000 intron (NM_005418, intron 4 of 22) intron (NM_005418, intron 4 of 22) -2291 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr5-215 chr5 139576839 139577071 + 12.7 0.000 intron (NM_181838, intron 2 of 7) (T)n|Simple_repeat|Simple_repeat 15616 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr1-321 chr1 118215937 118216169 + 12.7 0.000 Intergenic AluY|SINE|Alu -30825 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding chr5-624 chr5 68320438 68320670 + 12.7 0.000 Intergenic Intergenic 27977 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr21-130 chr21 28111146 28111378 + 12.7 0.000 intron (NR_126010, intron 2 of 4) intron (NR_126010, intron 2 of 4) 20859 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA chr7-462 chr7 5598986 5599218 + 12.7 0.000 intron (NM_003088, intron 1 of 4) intron (NM_003088, intron 1 of 4) 6286 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr1-1208 chr1 1290236 1290468 + 12.7 0.000 non-coding (NR_037668, exon 12 of 17) non-coding (NR_037668, exon 12 of 17) 5818 NR_106784 102465434 NR_106784 ENSG00000278073 MIR6726 hsa-mir-6726 microRNA 6726 ncRNA chr1-1068 chr1 3590604 3590836 + 12.7 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) 20788 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding GL000225.1-25 GL000225.1 94669 94901 + 12.7 0.000 NA NA NA NA chr4-220 chr4 108777056 108777288 + 12.7 0.000 Intergenic AluSz|SINE|Alu -14119 NM_001331032 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr3-411 chr3 189996099 189996331 + 12.7 0.000 intron (NM_001134418, intron 1 of 14) L1MA6|LINE|L1 124682 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr5-374 chr5 15791642 15791874 + 12.7 0.000 intron (NM_001278317, intron 2 of 3) LTR33|LTR|ERVL -143424 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr17-609 chr17 1916671 1916903 + 12.7 0.000 Intergenic Intergenic 86782 NM_002945 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr7-791 chr7 101546708 101546940 + 12.7 0.000 intron (NM_133457, intron 7 of 12) intron (NM_133457, intron 7 of 12) 22182 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr8-68 chr8 48558228 48558460 + 12.7 0.000 intron (NR_105002, intron 2 of 3) L1MD2|LINE|L1 6777 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr19-626 chr19 37997868 37998100 + 12.7 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 90776 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr11-893 chr11 72678628 72678860 + 12.7 0.000 Intergenic Intergenic -4322 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr2-534 chr2 54885986 54886218 + 12.7 0.000 intron (NM_001039753, intron 16 of 40) L1MC5|LINE|L1 124170 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr7-866 chr7 151212479 151212711 + 12.7 0.000 3' UTR (NM_007189, exon 15 of 15) 3' UTR (NM_007189, exon 15 of 15) -2107 NM_001369125 114483833 Hs.686793 NM_001369125 LOC114483833 - novel histone H2B-like protein protein-coding chr19-757 chr19 3534396 3534628 + 12.7 0.000 exon (NM_001136197, exon 10 of 11) exon (NM_001136197, exon 10 of 11) -4645 NM_001135580 100128569 Hs.664978 NM_001135580 ENSG00000183397 C19orf71 - chromosome 19 open reading frame 71 protein-coding chr16-415 chr16 14399602 14399834 + 12.7 0.000 Intergenic Intergenic -29452 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA chr9-277 chr9 20356572 20356804 + 12.7 0.000 intron (NM_001286691, intron 8 of 10) intron (NM_001286691, intron 8 of 10) 54550 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr10-648 chr10 35212679 35212911 + 12.7 0.000 3' UTR (NM_001352467, exon 4 of 4) 3' UTR (NM_001352467, exon 4 of 4) 16893 NM_182721 1390 Hs.200250 NM_001881 ENSG00000095794 CREM CREM-2|ICER|hCREM-2 cAMP responsive element modulator protein-coding chr4-605 chr4 110091530 110091762 + 12.7 0.000 intron (NM_001130721, intron 3 of 4) intron (NM_001130721, intron 3 of 4) 106969 NM_001130721 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr12-484 chr12 128381840 128382072 + 12.7 0.000 intron (NM_001136103, intron 1 of 8) intron (NM_001136103, intron 1 of 8) 87864 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr13-298 chr13 51317552 51317784 + 12.7 0.000 Intergenic MIRb|SINE|MIR -23364 NM_001101320 647174 Hs.685891 NM_001101320 ENSG00000253309 SERPINE3 - serpin family E member 3 protein-coding chr20-379 chr20 51617396 51617628 + 12.7 0.000 exon (NM_006045, exon 22 of 28) exon (NM_006045, exon 22 of 28) -54673 NM_001258295 4773 Hs.744148 NM_012340 ENSG00000101096 NFATC2 NFAT1|NFATP nuclear factor of activated T cells 2 protein-coding chr2-803 chr2 111892492 111892724 + 12.7 0.000 Intergenic AluSx|SINE|Alu -5999 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr2-1024 chr2 121294502 121294734 + 12.7 0.000 Intergenic AluSz6|SINE|Alu -9416 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr10-776 chr10 104479051 104479283 + 12.5 0.000 intron (NR_120624, intron 1 of 2) AluY|SINE|Alu 1108 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr4-374 chr4 128387108 128387340 + 12.5 0.000 Intergenic Intergenic -40792 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr8-576 chr8 128176846 128177078 + 12.5 0.000 Intergenic Intergenic 26846 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA chr12-699 chr12 106385272 106385504 + 12.5 0.000 intron (NM_001160708, intron 9 of 27) intron (NM_001160708, intron 9 of 27) 27306 NM_001160708 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding chr5-752 chr5 180642599 180642831 + 12.5 0.000 intron (NM_002020, intron 1 of 29) intron (NM_002020, intron 1 of 29) 6885 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr11-948 chr11 109854576 109854808 + 12.5 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -238700 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr16-632 chr16 64910226 64910458 + 12.5 0.000 Intergenic Intergenic 211721 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr15-356 chr15 34038968 34039200 + 12.5 0.000 5' UTR (NM_020371, exon 1 of 6) 5' UTR (NM_020371, exon 1 of 6) 120 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr5-158 chr5 72956370 72956602 + 12.5 0.000 intron (NM_001146032, intron 1 of 24) CpG 445 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr4-72 chr4 171023607 171023839 + 12.5 0.000 Intergenic AluSg|SINE|Alu -16879 NR_038838 100506122 Hs.434205 NR_038838 ENSG00000248872 LINC02431 - long intergenic non-protein coding RNA 2431 ncRNA chr1-698 chr1 209705120 209705352 + 12.5 0.000 intron (NM_181755, intron 2 of 6) intron (NM_181755, intron 2 of 6) 390 NM_005525 3290 Hs.195040 NM_005525 ENSG00000117594 HSD11B1 11-DH|11-beta-HSD1|CORTRD2|HDL|HSD11|HSD11B|HSD11L|SDR26C1 hydroxysteroid 11-beta dehydrogenase 1 protein-coding chr3-392 chr3 150221935 150222167 + 12.5 0.000 Intergenic Intergenic -16468 NR_110168 101927992 Hs.534682 NR_110167 ENSG00000244541 LINC01213 - long intergenic non-protein coding RNA 1213 ncRNA chr9-162 chr9 120564415 120564647 + 12.5 0.000 intron (NR_073558, intron 3 of 37) L1ME4c|LINE|L1 15636 NR_073558 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr5-639 chr5 84634277 84634509 + 12.5 0.000 Intergenic MER52D|LTR|ERV1 -249513 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding chr7-406 chr7 158667603 158667835 + 12.5 0.000 intron (NM_001281932, intron 14 of 28) intron (NM_001281932, intron 14 of 28) 37085 NM_001281932 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr6-623 chr6 151004676 151004908 + 12.5 0.000 intron (NR_146720, intron 21 of 28) intron (NR_146720, intron 21 of 28) -2216 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-712 chr2 207325842 207326074 + 12.5 0.000 Intergenic AluY|SINE|Alu -56534 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr22-408 chr22 40405627 40405859 + 12.5 0.000 exon (NM_015705, exon 8 of 22) exon (NM_015705, exon 8 of 22) 35149 NR_146412 27352 Hs.474914 NM_015705 ENSG00000100359 SGSM3 CIP85|MAP|RABGAP5|RUSC3|RUTBC3|RabGAP-5|rabGAPLP small G protein signaling modulator 3 protein-coding chr5-691 chr5 135838883 135839115 + 12.5 0.000 intron (NR_146141, intron 1 of 8) THE1B-int|LTR|ERVL-MaLR 4323 NM_145282 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr1-1506 chr1 179047201 179047433 + 12.5 0.000 intron (NM_001324310, intron 2 of 7) intron (NM_001324310, intron 2 of 7) 21193 NM_001324311 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr15-308 chr15 27350920 27351152 + 12.5 0.000 intron (NM_001270873, intron 5 of 5) (TG)n|Simple_repeat|Simple_repeat -189717 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr19-634 chr19 44852961 44853193 + 12.5 0.000 intron (NM_001042724, intron 1 of 8) AluJr|SINE|Alu 6780 NM_002856 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr22-447 chr22 50545547 50545779 + 12.5 0.000 promoter-TSS (NM_138433) promoter-TSS (NM_138433) -236 NM_138433 113730 Hs.137007 NM_138433 ENSG00000130487 KLHDC7B - kelch domain containing 7B protein-coding chr12-594 chr12 25386189 25386421 + 12.5 0.000 Intergenic CpG -135376 NM_001369787 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr17-813 chr17 58083497 58083729 + 12.5 0.000 promoter-TSS (NR_110809) promoter-TSS (NR_110809) 194 NM_080677 140735 Hs.720595 NM_080677 ENSG00000264364 DYNLL2 DNCL1B|Dlc2|RSPH22 dynein light chain LC8-type 2 protein-coding chr5-598 chr5 42311288 42311520 + 12.5 0.000 Intergenic Intergenic -112035 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr11-719 chr11 87345988 87346220 + 12.5 0.000 Intergenic Intergenic 308170 NM_022918 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding chr1-890 chr1 35559675 35559907 + 12.5 0.000 intron (NM_014284, intron 2 of 6) intron (NM_014284, intron 2 of 6) 1992 NM_014284 23154 Hs.121870 NM_014284 ENSG00000020129 NCDN - neurochondrin protein-coding chr18-158 chr18 47149730 47149962 + 12.5 0.000 intron (NM_032124, intron 1 of 6) L2b|LINE|L2 654 NM_001318765 84064 Hs.465041 NM_032124 ENSG00000167220 HDHD2 3110052N05Rik|HEL-S-301 haloacid dehalogenase like hydrolase domain containing 2 protein-coding chr1-573 chr1 184051829 184052061 + 12.5 0.000 intron (NR_125335, intron 1 of 5) intron (NR_125335, intron 1 of 5) 215 NM_001127394 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr7-828 chr7 129257786 129258018 + 12.5 0.000 intron (NM_001130720, intron 1 of 16) L1ME5|LINE|L1 32872 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr3-922 chr3 193461781 193462013 + 12.5 0.000 intron (NM_032279, intron 13 of 29) intron (NM_032279, intron 13 of 29) -83144 NM_198505 344905 Hs.658032 NM_198505 ENSG00000187527 ATP13A5 - ATPase 13A5 protein-coding chr3-872 chr3 154324243 154324475 + 12.5 0.000 exon (NM_020865, exon 1 of 25) exon (NM_020865, exon 1 of 25) 128 NM_020865 170506 Hs.446270 NM_020865 ENSG00000174953 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH-box helicase 36 protein-coding chr6-436 chr6 44128743 44128975 + 12.5 0.000 intron (NM_018426, intron 1 of 23) intron (NM_018426, intron 1 of 23) 1305 NM_018426 55362 Hs.414473 NM_018426 ENSG00000137216 TMEM63B C6orf110 transmembrane protein 63B protein-coding chr14-391 chr14 50342815 50343047 + 12.5 0.000 intron (NM_001282236, intron 4 of 8) intron (NM_001282236, intron 4 of 8) 30607 NM_001003803 27109 Hs.438489 NM_015684 ENSG00000125375 DMAC2L ATP5S|ATPW|FB|HSU79253 distal membrane arm assembly complex 2 like protein-coding chr2-626 chr2 65063625 65063857 + 12.5 0.000 intron (NR_134966, intron 1 of 5) intron (NR_134966, intron 1 of 5) 7325 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding chr6-619 chr6 148671461 148671693 + 12.5 0.000 Intergenic L1PA7|LINE|L1 -75453 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr1-1455 chr1 154807026 154807258 + 12.5 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 52734 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chrX-154 chrX 153516771 153517003 + 12.5 0.000 Intergenic Intergenic -19235 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr17-868 chr17 80421806 80422038 + 12.5 0.000 exon (NM_001352760, exon 3 of 9) exon (NM_001352760, exon 3 of 9) 2504 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr9-735 chr9 134826776 134827008 + 12.5 0.000 intron (NM_001278074, intron 63 of 65) intron (NM_001278074, intron 63 of 65) 22477 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr2-463 chr2 96523285 96523517 + 12.5 0.000 Intergenic AluSz|SINE|Alu 8905 NR_135564 105373496 Hs.570138 NR_135564 ENSG00000235480 LOC105373496 - uncharacterized LOC105373496 ncRNA chr12-429 chr12 52942569 52942801 + 12.5 0.000 intron (NM_001256293, intron 1 of 8) intron (NM_001256293, intron 1 of 8) -6186 NM_199187 3875 Hs.406013 NM_000224 ENSG00000111057 KRT18 CK-18|CYK18|K18 keratin 18 protein-coding chr6-563 chr6 86796164 86796396 + 12.5 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR -141248 NM_000865 3354 Hs.1611 NM_000865 ENSG00000168830 HTR1E 5-HT1E 5-hydroxytryptamine receptor 1E protein-coding chr1-1529 chr1 196416190 196416422 + 12.5 0.000 intron (NM_001287820, intron 12 of 26) Tigger7|DNA|TcMar-Tigger 166175 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr14-420 chr14 70809413 70809645 + 12.5 0.000 promoter-TSS (NM_001284230) promoter-TSS (NM_001284230) -16 NM_033141 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr11-479 chr11 120777695 120777927 + 12.5 0.000 intron (NM_001282470, intron 2 of 19) AluSz|SINE|Alu 41304 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr8-599 chr8 142259984 142260216 + 12.5 0.000 intron (NM_001366901, intron 12 of 13) L2c|LINE|L2 61744 NR_024378 619434 Hs.393308 NR_024378 ENSG00000254008 LINC00051 C8orf43|NCRNA00051 long intergenic non-protein coding RNA 51 ncRNA chr9-531 chr9 97106036 97106268 + 12.5 0.000 Intergenic Charlie1|DNA|hAT-Charlie -24207 NR_002942 340508 Hs.680438 NR_002942 ENSG00000228376 GAS2L1P2 - growth arrest specific 2 like 1 pseudogene 2 pseudo chr1-657 chr1 89780777 89781009 + 12.5 0.000 Intergenic Intergenic -40139 NM_001134479 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr12-405 chr12 32115747 32115979 + 12.5 0.000 intron (NR_148725, intron 1 of 9) intron (NR_148725, intron 1 of 9) 9016 NM_001714 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr8-583 chr8 132037733 132037965 + 12.5 0.000 intron (NM_001080399, intron 8 of 13) intron (NM_001080399, intron 8 of 13) 21533 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding chr9-634 chr9 97362078 97362310 + 12.5 0.000 intron (NM_020893, intron 27 of 36) intron (NM_020893, intron 27 of 36) 1487 NR_031637 100302223 NR_031637 ENSG00000221269 MIR1302-8 MIRN1302-8|hsa-mir-1302-8 microRNA 1302-8 ncRNA chr1-1029 chr1 211420891 211421123 + 12.5 0.000 intron (NR_026761, intron 4 of 5) Tigger4|DNA|TcMar-Tigger 38252 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr16-237 chr16 57811905 57812137 + 12.5 0.000 intron (NM_001278081, intron 1 of 3) AluJr|SINE|Alu 1384 NM_001278081 388282 Hs.434720 NM_001278081 LOC388282 - uncharacterized LOC388282 protein-coding chr6-621 chr6 148869735 148869967 + 12.5 0.000 intron (NM_005715, intron 1 of 7) intron (NM_005715, intron 1 of 7) 94833 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA chr22-362 chr22 19626896 19627128 + 12.5 0.000 Intergenic Charlie4a|DNA|hAT-Charlie -60173 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr1-1519 chr1 183818126 183818358 + 12.5 0.000 intron (NM_001297671, intron 2 of 17) intron (NM_001297671, intron 2 of 17) 13122 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding chrX-199 chrX 5335489 5335721 + 12.5 0.000 Intergenic MER2|DNA|TcMar-Tigger -702033 NR_110390 101928201 Hs.586488 NR_110390 ENSG00000236513 LOC101928201 - uncharacterized LOC101928201 ncRNA chr2-101 chr2 23455514 23455746 + 12.5 0.000 intron (NM_052920, intron 1 of 13) AluSx3|SINE|Alu 70451 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr12-517 chr12 57190818 57191050 + 12.5 0.000 exon (NM_002332, exon 43 of 89) exon (NM_002332, exon 43 of 89) -3570 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr4-467 chr4 158990799 158991031 + 12.5 0.000 intron (NM_152543, intron 1 of 4) intron (NM_152543, intron 1 of 4) 44314 NM_152543 152940 Hs.415576 NM_152543 ENSG00000164123 C4orf45 - chromosome 4 open reading frame 45 protein-coding chr13-270 chr13 39164508 39164740 + 12.5 0.000 Intergenic L1ME3|LINE|L1 126168 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr1-906 chr1 40854351 40854583 + 12.5 0.000 Intergenic AluSq2|SINE|Alu 7896 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr19-885 chr19 57406603 57406835 + 12.5 0.000 Intergenic L1M2|LINE|L1 -4428 NM_001330617 7565 Hs.729403 NM_006959 ENSG00000186272 ZNF17 HPF3|KOX10 zinc finger protein 17 protein-coding chr14-323 chr14 102928449 102928681 + 12.5 0.000 intron (NM_030943, intron 4 of 11) CpG-7685 5909 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr17-823 chr17 62633777 62634009 + 12.5 0.000 intron (NM_006039, intron 1 of 29) intron (NM_006039, intron 1 of 29) 6223 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr1-1021 chr1 205040163 205040395 + 12.5 0.000 Intergenic Intergenic -2670 NM_001346083 6900 Hs.519220 NM_005076 ENSG00000184144 CNTN2 AXT|FAME5|TAG-1|TAX|TAX1 contactin 2 protein-coding chr16-383 chr16 88714234 88714466 + 12.5 0.000 TTS (NM_001142864) TTS (NM_001142864) 1987 NR_039873 100616167 NR_039873 ENSG00000284585 MIR4722 - microRNA 4722 ncRNA chr17-611 chr17 2572406 2572638 + 12.5 0.000 Intergenic AluSq2|SINE|Alu -21132 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr8-604 chr8 142826958 142827190 + 12.5 0.000 Intergenic SVA_B|Retroposon|SVA -7727 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr11-877 chr11 67303921 67304153 + 12.5 0.000 intron (NM_017857, intron 1 of 13) CpG 507 NM_017857 54961 Hs.29173 NM_017857 ENSG00000172830 SSH3 SSH3L slingshot protein phosphatase 3 protein-coding chr11-922 chr11 82284437 82284669 + 12.5 0.000 intron (NR_120571, intron 3 of 7) intron (NR_120571, intron 3 of 7) 119360 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA chr6-568 chr6 99632536 99632768 + 12.5 0.000 Intergenic AluJo|SINE|Alu 25878 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr5-605 chr5 53705743 53705975 + 12.5 0.000 Intergenic L1PA6|LINE|L1 113823 NR_147168 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr18-140 chr18 57748814 57749046 + 12.5 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 54385 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr1-444 chr1 3504935 3505167 + 12.5 0.000 intron (NM_001409, intron 17 of 36) intron (NM_001409, intron 17 of 36) 50386 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr9-738 chr9 135967590 135967822 + 12.5 0.000 Intergenic Intergenic -6333 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr6-342 chr6 44150780 44151012 + 12.5 0.000 intron (NM_001318792, intron 18 of 23) intron (NM_001318792, intron 18 of 23) -7924 NM_007058 11131 Hs.225953 NM_007058 ENSG00000137225 CAPN11 calpain11 calpain 11 protein-coding chr20-389 chr20 59578668 59578900 + 12.3 0.000 intron (NM_001199505, intron 1 of 12) intron (NM_001199505, intron 1 of 12) 1275 NM_001199505 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding chr3-767 chr3 52826743 52826975 + 12.3 0.000 exon (NM_001166449, exon 4 of 22) exon (NM_001166449, exon 4 of 22) 2924 NR_046615 100873993 Hs.602700 NR_046615 ENSG00000239799 ITIH4-AS1 - ITIH4 antisense RNA 1 ncRNA chrX-217 chrX 38667012 38667244 + 12.3 0.000 intron (NM_004615, intron 2 of 7) intron (NM_004615, intron 2 of 7) 105650 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr19-730 chr19 52941957 52942189 + 12.3 0.000 intron (NM_001202473, intron 3 of 3) intron (NM_001202473, intron 3 of 3) 521 NR_037805 399669 Hs.745445 NM_203307 ENSG00000213801 ZNF321P ZNF321 zinc finger protein 321, pseudogene pseudo chr10-780 chr10 110182098 110182330 + 12.3 0.000 Intergenic Intergenic -25391 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr10-487 chr10 103304509 103304741 + 12.3 0.000 intron (NM_001011663, intron 9 of 9) AluSx|SINE|Alu 27487 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr11-953 chr11 113805070 113805302 + 12.3 0.000 intron (NM_001346272, intron 17 of 22) intron (NM_001346272, intron 17 of 22) 25390 NM_001101389 644672 Hs.705360 NM_001101389 ENSG00000228607 CLDN25 - claudin 25 protein-coding chr5-544 chr5 160368462 160368694 + 12.3 0.000 intron (NM_001366504, intron 1 of 3) intron (NM_001366504, intron 1 of 3) 2048 NM_031908 114898 Hs.110062 NM_031908 ENSG00000145861 C1QTNF2 CTRP2|zacrp2 C1q and TNF related 2 protein-coding chr12-386 chr12 6068640 6068872 + 12.3 0.000 intron (NM_000552, intron 10 of 51) AluSz|SINE|Alu -28573 NR_145989 109729112 NR_145989 SNORA120 - small nucleolar RNA, H/ACA box 120 snoRNA chr21-143 chr21 36651297 36651529 + 12.3 0.000 Intergenic MIR|SINE|MIR -47702 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding chr7-752 chr7 69491932 69492164 + 12.3 0.000 Intergenic AluY|SINE|Alu 105576 NR_108105 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr10-700 chr10 75232545 75232777 + 12.3 0.000 TTS (NM_144589) TTS (NM_144589) 3296 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr5-357 chr5 158414751 158414983 + 12.3 0.000 Intergenic Intergenic -5094 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr12-635 chr12 51631691 51631923 + 12.3 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 40571 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr9-622 chr9 91495416 91495648 + 12.3 0.000 Intergenic Intergenic -70906 NM_001289999 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr1-1317 chr1 32108207 32108439 + 12.3 0.000 intron (NM_012316, intron 1 of 13) intron (NM_012316, intron 1 of 13) 267 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr1-332 chr1 223831629 223831861 + 12.3 0.000 intron (NM_005426, intron 1 of 18) intron (NM_005426, intron 1 of 18) 14202 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr21-56 chr21 39385755 39385987 + 12.3 0.000 intron (NM_001350296, intron 1 of 4) CpG -1892 NM_001146218 7485 Hs.198308 NM_004627 ENSG00000182093 GET1 CHD5|WRB guided entry of tail-anchored proteins factor 1 protein-coding chr4-508 chr4 6692450 6692682 + 12.3 0.000 Intergenic Intergenic -1312 NM_005980 6286 Hs.2962 NM_005980 ENSG00000163993 S100P MIG9 S100 calcium binding protein P protein-coding chr3-287 chr3 126985303 126985535 + 12.3 0.000 Intergenic Intergenic -3175 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr19-743 chr19 1334080 1334312 + 12.3 0.000 Intergenic Intergenic -20763 NM_001369790 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr1-1375 chr1 69778046 69778278 + 12.3 0.000 intron (NM_001370785, intron 3 of 26) L2c|LINE|L2 -141160 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr4-656 chr4 156247761 156247993 + 12.3 0.000 Intergenic MER45B|DNA|hAT-Tip100 -294011 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr12-641 chr12 53820594 53820826 + 12.3 0.000 Intergenic Intergenic -63676 NR_104332 102216268 Hs.742074 NR_104332 ENSG00000260492 CISTR CISTR-ACT|CISTRACT|re52431 chondrogenesis-associated transcript ncRNA chr2-632 chr2 75528350 75528582 + 12.3 0.000 intron (NM_001369524, intron 2 of 5) L1PB1|LINE|L1 4398 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA chr8-610 chr8 143975367 143975599 + 12.3 0.000 intron (NM_000445, intron 1 of 32) CpG-27770 1262 NM_000445 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr6-524 chr6 36131648 36131880 + 12.3 0.000 intron (NR_072996, intron 2 of 9) MIR|SINE|MIR 1251 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr1-1431 chr1 118988027 118988259 + 12.3 0.000 5' UTR (NM_001330677, exon 1 of 8) 5' UTR (NM_001330677, exon 1 of 8) 200 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr12-689 chr12 98563147 98563379 + 12.3 0.000 Intergenic AluSx1|SINE|Alu -30362 NM_005888 5250 Hs.290404 NM_002635 ENSG00000075415 SLC25A3 OK/SW-cl.48|PHC|PTP solute carrier family 25 member 3 protein-coding chr6-585 chr6 118618852 118619084 + 12.3 0.000 intron (NM_001042475, intron 2 of 12) HERV30-int|LTR|ERV1 32623 NM_206921 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr17-800 chr17 49256483 49256715 + 12.3 0.000 intron (NR_034161, intron 2 of 2) AluSx1|SINE|Alu 8356 NR_034161 124871 Hs.446890 NM_001007529 ENSG00000177369 FLJ40194 - uncharacterized FLJ40194 ncRNA chr16-677 chr16 81185338 81185570 + 12.3 0.000 intron (NM_001076780, intron 11 of 17) L2b|LINE|L2 -4123 NM_001278425 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr14-371 chr14 104743603 104743835 + 12.3 0.000 intron (NM_199165, intron 10 of 12) intron (NM_199165, intron 10 of 12) -9428 NM_021709 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr22-437 chr22 46881740 46881972 + 12.3 0.000 intron (NM_001284305, intron 5 of 12) intron (NM_001284305, intron 5 of 12) 34186 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr9-199 chr9 131363728 131363960 + 12.3 0.000 Intergenic L1ME1|LINE|L1 -66246 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr7-792 chr7 101560343 101560575 + 12.3 0.000 Intergenic AluJr|SINE|Alu 8547 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr17-613 chr17 3953195 3953427 + 12.3 0.000 intron (NM_174955, intron 3 of 21) intron (NM_174955, intron 3 of 21) 11126 NM_174953 489 Hs.513870 NM_005173 ENSG00000074370 ATP2A3 SERCA3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 protein-coding chr15-261 chr15 56880873 56881105 + 12.3 0.000 Intergenic L1M5|LINE|L1 -37101 NM_001322151 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr10-412 chr10 536914 537146 + 12.3 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -91534 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr8-526 chr8 90387420 90387652 + 12.3 0.000 intron (NR_051989, intron 3 of 3) intron (NR_051989, intron 3 of 3) 166048 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA chr22-440 chr22 49566736 49566968 + 12.3 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) -23386 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr2-397 chr2 133324392 133324624 + 12.3 0.000 intron (NM_207481, intron 3 of 17) intron (NM_207481, intron 3 of 17) 58313 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA chr2-1019 chr2 116145859 116146091 + 12.3 0.000 Intergenic Intergenic 802160 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr19-637 chr19 45153619 45153851 + 12.3 0.000 exon (NM_198478, exon 4 of 4) exon (NM_198478, exon 4 of 4) 6415 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr16-699 chr16 85493832 85494064 + 12.3 0.000 Intergenic AluJo|SINE|Alu -117461 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr2-250 chr2 225460905 225461137 + 12.3 0.000 intron (NM_001371273, intron 3 of 7) intron (NM_001371273, intron 3 of 7) 60135 NM_020864 57624 Hs.224409 NM_020864 ENSG00000144460 NYAP2 KIAA1486 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 protein-coding chr19-690 chr19 17747845 17748077 + 12.3 0.000 intron (NM_001161357, intron 1 of 28) CpG 217 NM_001161357 23149 Hs.96485 NM_015122 ENSG00000130475 FCHO1 - FCH domain only 1 protein-coding chr18-183 chr18 6729048 6729280 + 12.3 0.000 promoter-TSS (NM_001366231) promoter-TSS (NM_001366231) -552 NM_001366230 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr10-347 chr10 103738737 103738969 + 12.3 0.000 intron (NM_014631, intron 3 of 13) AluSp|SINE|Alu -7926 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr20-306 chr20 3292623 3292855 + 12.3 0.000 intron (NM_001009984, intron 25 of 36) AluSz|SINE|Alu -53549 NR_135000 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr6-558 chr6 83088206 83088438 + 12.3 0.000 intron (NM_015018, intron 1 of 38) L2a|LINE|L2 20656 NM_015018 23033 Hs.520246 NM_015018 ENSG00000083097 DOP1A DOP1|DOPEY1|KIAA1117|dJ202D23.2 DOP1 leucine zipper like protein A protein-coding chr2-241 chr2 172383826 172384058 + 12.3 0.000 Intergenic Intergenic -43394 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr2-544 chr2 120826044 120826276 + 12.3 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 33879 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr13-83 chr13 102374526 102374758 + 12.3 0.000 TTS (NR_125912) TTS (NR_125912) 7112 NR_125912 100874081 Hs.569296 NR_125912 ENSG00000234445 FGF14-AS1 - FGF14 antisense RNA 1 ncRNA chr17-567 chr17 50353756 50353988 + 12.3 0.000 exon (NM_022167, exon 2 of 11) exon (NM_022167, exon 2 of 11) 7746 NR_110010 64132 Hs.463416 NM_022167 ENSG00000015532 XYLT2 PXYLT2|SOS|XT-II|XT2|xylT-II xylosyltransferase 2 protein-coding chr12-620 chr12 48856365 48856597 + 12.3 0.000 TTS (NM_014470) TTS (NM_014470) -4318 NM_004818 9416 Hs.130098 NM_004818 ENSG00000174243 DDX23 PRPF28|SNRNP100|U5-100K|U5-100KD|prp28 DEAD-box helicase 23 protein-coding chr9-739 chr9 135981022 135981254 + 12.3 0.000 Intergenic Intergenic -19765 NM_016172 10422 Hs.9194 NM_016172 ENSG00000130560 UBAC1 GBDR1|KPC2|UBADC1 UBA domain containing 1 protein-coding chr2-852 chr2 219045879 219046111 + 12.3 0.000 Intergenic Intergenic -4444 NM_001278295 255101 Hs.147762 NM_152389 ENSG00000181378 CFAP65 CCDC108 cilia and flagella associated protein 65 protein-coding chr22-359 chr22 19335105 19335337 + 12.3 0.000 intron (NM_003325, intron 24 of 24) L1MEc|LINE|L1 -43502 NM_001835 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding chr15-462 chr15 89655141 89655373 + 12.3 0.000 intron (NM_198525, intron 1 of 18) CpG 210 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr6-229 chr6 101509054 101509286 + 12.3 0.000 intron (NM_001166247, intron 1 of 16) AluY|SINE|Alu 110185 NM_021956 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr10-399 chr10 104491134 104491366 + 12.3 0.000 Intergenic MIR|SINE|MIR -10975 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA chr6-321 chr6 7672754 7672986 + 12.3 0.000 Intergenic MIRb|SINE|MIR -53229 NM_001718 654 Hs.285671 NM_001718 ENSG00000153162 BMP6 VGR|VGR1 bone morphogenetic protein 6 protein-coding chr3-510 chr3 52573160 52573392 + 12.3 0.000 intron (NM_001366074, intron 25 of 30) MIRc|SINE|MIR 36671 NM_001124767 440957 Hs.660577 NM_001124767 ENSG00000168273 SMIM4 C3orf78 small integral membrane protein 4 protein-coding chr1-888 chr1 35091870 35092102 + 12.3 0.000 intron (NM_001319955, intron 1 of 8) AluSx1|SINE|Alu 12601 NM_024772 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr3-929 chr3 196417757 196417989 + 12.3 0.000 intron (NM_015562, intron 1 of 10) AluJo|SINE|Alu -13512 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr14-452 chr14 91290630 91290862 + 12.3 0.000 intron (NM_001080414, intron 24 of 29) intron (NM_001080414, intron 24 of 29) -36866 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr22-162 chr22 37593049 37593281 + 12.3 0.000 Intergenic AluSc8|SINE|Alu -13078 NM_006498 3957 Hs.531776 NM_006498 ENSG00000100079 LGALS2 HL14 galectin 2 protein-coding chr1-980 chr1 155037199 155037431 + 12.3 0.000 intron (NM_152494, intron 4 of 16) intron (NM_152494, intron 4 of 16) 3509 NM_152494 149095 Hs.567717 NM_152494 ENSG00000163357 DCST1 - DC-STAMP domain containing 1 protein-coding chr7-614 chr7 127667156 127667388 + 12.3 0.000 intron (NM_014390, intron 1 of 23) intron (NM_014390, intron 1 of 23) 15078 NM_014390 27044 Hs.122523 NM_014390 ENSG00000197157 SND1 TDRD11|Tudor-SN|p100 staphylococcal nuclease and tudor domain containing 1 protein-coding chr10-790 chr10 112759272 112759504 + 12.3 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -64108 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr22-219 chr22 40673271 40673503 + 12.3 0.000 Intergenic Intergenic -5791 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr16-409 chr16 4686375 4686607 + 12.3 0.000 3' UTR (NM_001142291, exon 16 of 16) 3' UTR (NM_001142291, exon 16 of 16) -7202 NM_032349 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr2-1130 chr2 223724892 223725124 + 12.3 0.000 Intergenic Intergenic 112574 NR_110905 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr16-564 chr16 2467086 2467318 + 12.3 0.000 non-coding (NR_135198, exon 1 of 1) non-coding (NR_135198, exon 1 of 1) 1011 NR_135198 729652 Hs.638553 NR_135198 ENSG00000259895 LOC729652 - uncharacterized LOC729652 ncRNA chr9-654 chr9 111601559 111601791 + 12.3 0.000 Intergenic Intergenic -1820 NM_001146109 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr3-844 chr3 134352806 134353038 + 12.3 0.000 Intergenic Intergenic 14940 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr11-739 chr11 120212354 120212586 + 12.1 0.000 intron (NM_178507, intron 1 of 3) intron (NM_178507, intron 1 of 3) 1438 NM_178507 220323 Hs.445081 NM_178507 ENSG00000184232 OAF NS5ATP13TP2 out at first homolog protein-coding chr6-331 chr6 34075106 34075338 + 12.1 0.000 intron (NM_001282847, intron 2 of 9) intron (NM_001282847, intron 2 of 9) 30745 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr12-498 chr12 13290259 13290491 + 12.1 0.000 Intergenic Intergenic 86370 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr1-1400 chr1 87628107 87628339 + 12.1 0.000 Intergenic AluSg|SINE|Alu -256568 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA chr6-583 chr6 117345115 117345347 + 12.1 0.000 intron (NM_002944, intron 26 of 42) L2c|LINE|L2 79673 NM_182645 245806 Hs.99324 NM_153453 ENSG00000170162 VGLL2 VGL2|VITO1 vestigial like family member 2 protein-coding chr4-304 chr4 150061608 150061840 + 12.1 0.000 Intergenic Intergenic -16721 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr19-593 chr19 12863718 12863950 + 12.1 0.000 intron (NM_014975, intron 12 of 25) AluJb|SINE|Alu 11574 NR_106852 102466196 NR_106852 ENSG00000276181 MIR6794 hsa-mir-6794 microRNA 6794 ncRNA chr13-341 chr13 108474967 108475199 + 12.1 0.000 Intergenic Intergenic -120822 NM_015011 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr2-1011 chr2 109518444 109518676 + 12.1 0.000 Intergenic Intergenic 95107 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr3-879 chr3 156826073 156826305 + 12.1 0.000 promoter-TSS (NM_001193283) promoter-TSS (NM_001193283) -118 NM_001004316 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr10-617 chr10 15705144 15705376 + 12.1 0.000 intron (NM_001291494, intron 2 of 28) L2a|LINE|L2 14662 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr9-673 chr9 123640322 123640554 + 12.1 0.000 intron (NM_001352968, intron 8 of 18) intron (NM_001352968, intron 8 of 18) -154816 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr12-330 chr12 125671749 125671981 + 12.1 0.000 Intergenic AluSg|SINE|Alu 49413 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr9-185 chr9 86099545 86099777 + 12.1 0.000 promoter-TSS (NM_016548) promoter-TSS (NM_016548) -103 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr3-806 chr3 89279882 89280114 + 12.1 0.000 intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 172377 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr7-554 chr7 138952077 138952309 + 12.1 0.000 intron (NM_020910, intron 1 of 19) MER5B|DNA|hAT-Charlie 29196 NM_020910 57670 Hs.605380 NM_020910 ENSG00000122778 KIAA1549 - KIAA1549 protein-coding chr10-823 chr10 127046676 127046908 + 12.1 0.000 intron (NM_001290223, intron 21 of 51) intron (NM_001290223, intron 21 of 51) 141383 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr2-383 chr2 44647851 44648083 + 12.1 0.000 intron (NM_024766, intron 3 of 10) L1ME3G|LINE|L1 286020 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding chr10-458 chr10 73423117 73423349 + 12.1 0.000 TTS (NM_001024593) TTS (NM_001024593) -9175 NM_001320880 310 Hs.631827 NM_001156 ENSG00000138279 ANXA7 ANX7|SNX|SYNEXIN annexin A7 protein-coding chr1-1412 chr1 99246021 99246253 + 12.1 0.000 Intergenic L1ME3B|LINE|L1 -18155 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr6-591 chr6 125931988 125932220 + 12.1 0.000 TTS (NM_001199619) TTS (NM_001199619) 12849 NM_001199622 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr3-726 chr3 25558459 25558691 + 12.1 0.000 intron (NR_110892, intron 3 of 6) intron (NR_110892, intron 3 of 6) 100265 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr14-458 chr14 99719583 99719815 + 12.1 0.000 intron (NM_006668, intron 10 of 14) L1MB3|LINE|L1 35401 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr14-451 chr14 90556093 90556325 + 12.1 0.000 intron (NM_001320421, intron 20 of 20) intron (NM_001320421, intron 20 of 20) -39000 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr5-477 chr5 176289299 176289531 + 12.1 0.000 intron (NM_001308196, intron 3 of 11) intron (NM_001308196, intron 3 of 11) -23730 NM_001308200 375484 Hs.719847 NM_198567 ENSG00000170085 SIMC1 C5orf25|OOMA1|PLEIAD SUMO interacting motifs containing 1 protein-coding chr6-323 chr6 13615073 13615305 + 12.1 0.000 promoter-TSS (NM_001317724) promoter-TSS (NM_001317724) -138 NM_001317724 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr3-769 chr3 53150357 53150589 + 12.1 0.000 Intergenic Intergenic -10736 NM_001354679 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr3-662 chr3 127622722 127622954 + 12.1 0.000 TTS (NM_004526) TTS (NM_004526) -6347 NM_015720 50512 Hs.591290 NM_015720 ENSG00000114631 PODXL2 EG|PODLX2 podocalyxin like 2 protein-coding chr3-349 chr3 19990635 19990867 + 12.1 0.000 intron (NM_001252657, intron 2 of 2) intron (NM_001252657, intron 2 of 2) 21513 NR_027694 151649 Hs.733161 NM_144714 ENSG00000183977 PP2D1 C3orf48 protein phosphatase 2C like domain containing 1 protein-coding chr16-373 chr16 72787895 72788127 + 12.1 0.000 exon (NM_006885, exon 10 of 10) exon (NM_006885, exon 10 of 10) -123041 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr14-264 chr14 104861567 104861799 + 12.1 0.000 Intergenic Intergenic -3585 NM_015005 283638 Hs.533721 NM_015005 ENSG00000099814 CEP170B CEP170R|FAM68C|KIAA0284 centrosomal protein 170B protein-coding chr18-103 chr18 49265654 49265886 + 12.1 0.000 intron (NM_001353210, intron 11 of 16) AluSp|SINE|Alu 194875 NM_017653 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding chr17-41 chr17 26881302 26881534 + 12.1 0.000 Intergenic ALR/Alpha|Satellite|centr 207823 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr7-747 chr7 67384277 67384509 + 12.1 0.000 Intergenic Intergenic 48417 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr2-407 chr2 212680614 212680846 + 12.1 0.000 Intergenic Intergenic -114601 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr12-558 chr12 339899 340131 + 12.1 0.000 intron (NM_001042603, intron 10 of 27) AluJb|SINE|Alu 49305 NM_001042603 5927 Hs.76272 NM_005056 ENSG00000073614 KDM5A RBBP-2|RBBP2|RBP2 lysine demethylase 5A protein-coding chr3-332 chr3 169384990 169385222 + 12.1 0.000 intron (NM_001366473, intron 1 of 15) AluSz6|SINE|Alu -62761 NR_134932 105374205 NR_134932 ENSG00000241479 LOC105374205 - uncharacterized LOC105374205 ncRNA chr11-958 chr11 118572415 118572647 + 12.1 0.000 5' UTR (NM_001142281, exon 1 of 9) 5' UTR (NM_001142281, exon 1 of 9) 122 NM_001655 372 Hs.33642 NM_001655 ENSG00000095139 ARCN1 COPD|SRMMD archain 1 protein-coding chr2-890 chr2 18721337 18721569 + 12.1 0.000 Intergenic Intergenic -131873 NM_001199103 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr7-530 chr7 114260063 114260295 + 12.1 0.000 intron (NR_033766, intron 1 of 19) AluSx|SINE|Alu -154636 NR_033767 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding chr9-723 chr9 134281329 134281561 + 12.1 0.000 Intergenic Intergenic 13952 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr10-838 chr10 133274242 133274474 + 12.1 0.000 intron (NM_001164490, intron 1 of 19) intron (NM_001164490, intron 1 of 19) 2510 NM_001109 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding chr10-232 chr10 113126642 113126874 + 12.1 0.000 5' UTR (NM_001349871, exon 1 of 12) 5' UTR (NM_001349871, exon 1 of 12) 125 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr2-555 chr2 186951303 186951535 + 12.1 0.000 Intergenic MER21-int|LTR|ERVL -102249 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr11-843 chr11 64117473 64117705 + 12.1 0.000 exon (NM_013280, exon 2 of 2) exon (NM_013280, exon 2 of 2) 13699 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr19-448 chr19 45222115 45222347 + 12.1 0.000 intron (NM_138568, intron 6 of 9) AluSz|SINE|Alu 11980 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chr19-849 chr19 45118001 45118233 + 12.1 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 24938 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr12-208 chr12 31959677 31959909 + 12.1 0.000 intron (NM_018169, intron 1 of 5) CpG 378 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr8-402 chr8 73931120 73931352 + 12.1 0.000 Intergenic AluJb|SINE|Alu 40672 NM_001204861 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr2-794 chr2 97035048 97035280 + 12.1 0.000 Intergenic Intergenic -48584 NM_001122646 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr22-222 chr22 41682372 41682604 + 12.1 0.000 5' UTR (NM_005008, exon 2 of 4) 5' UTR (NM_005008, exon 2 of 4) 6379 NM_005008 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chrX-292 chrX 149830607 149830839 + 12.1 0.000 intron (NR_109813, intron 1 of 2) intron (NR_109813, intron 1 of 2) 5015 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr8-443 chr8 22038976 22039208 + 12.1 0.000 Intergenic AluJr|SINE|Alu -3661 NM_001304478 8822 Hs.248192 NM_003867 ENSG00000158815 FGF17 FGF-13|FGF-17|HH20 fibroblast growth factor 17 protein-coding chr2-694 chr2 178756725 178756957 + 12.1 0.000 intron (NM_133437, intron 43 of 191) intron (NM_133437, intron 43 of 191) -20085 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr2-840 chr2 201083292 201083524 + 12.1 0.000 intron (NM_002491, intron 2 of 2) AluSp|SINE|Alu 11407 NM_002491 4709 Hs.109760 NM_002491 ENSG00000119013 NDUFB3 B12|CI-B12|MC1DN25 NADH:ubiquinone oxidoreductase subunit B3 protein-coding chr15-414 chr15 66786996 66787228 + 12.1 0.000 Intergenic L2b|LINE|L2 84876 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr1-1339 chr1 42335049 42335281 + 12.1 0.000 promoter-TSS (NM_001198852) promoter-TSS (NM_001198852) 50 NM_001198852 22887 Hs.26023 NM_014947 ENSG00000198815 FOXJ3 - forkhead box J3 protein-coding chr11-916 chr11 77657905 77658137 + 12.1 0.000 Intergenic AluSx|SINE|Alu -20215 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding chr9-352 chr9 35653486 35653718 + 12.1 0.000 Intergenic AluSx1|SINE|Alu -2671 NM_014450 27240 Hs.88012 NM_014450 ENSG00000137078 SIT1 SIT|SIT-R signaling threshold regulating transmembrane adaptor 1 protein-coding chr5-593 chr5 36744998 36745230 + 12.1 0.000 Intergenic Intergenic 131580 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA chr1-1276 chr1 20867892 20868124 + 12.1 0.000 intron (NM_003760, intron 15 of 31) intron (NM_003760, intron 15 of 31) -81320 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr1-1469 chr1 156773042 156773274 + 12.1 0.000 intron (NM_005973, intron 1 of 6) intron (NM_005973, intron 1 of 6) 5623 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC proline rich mitotic checkpoint control factor protein-coding chr5-336 chr5 87223004 87223236 + 12.1 0.000 intron (NR_130914, intron 2 of 2) intron (NR_130914, intron 2 of 2) 16081 NR_130914 55338 Hs.677194 NM_018382 LINC01949 - long intergenic non-protein coding RNA 1949 ncRNA chr9-577 chr9 16626529 16626761 + 12.1 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -100169 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr7-367 chr7 50077916 50078148 + 12.1 0.000 intron (NM_007009, intron 3 of 7) L1MA1|LINE|L1 15214 NM_001159878 11055 Hs.388841 NM_007009 ENSG00000042813 ZPBP ZPBP1 zona pellucida binding protein protein-coding chr7-666 chr7 6652755 6652987 + 11.9 0.000 exon (NM_001278559, exon 9 of 9) exon (NM_001278559, exon 9 of 9) 15553 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr4-353 chr4 76000740 76000972 + 11.9 0.000 TTS (NM_002416) TTS (NM_002416) 6653 NM_002416 4283 Hs.77367 NM_002416 ENSG00000138755 CXCL9 CMK|Humig|MIG|SCYB9|crg-10 C-X-C motif chemokine ligand 9 protein-coding chr8-342 chr8 104639069 104639301 + 11.9 0.000 Intergenic Intergenic -50161 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr7-823 chr7 128133145 128133377 + 11.9 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 51400 NR_030324 693178 NR_030324 ENSG00000207588 MIR593 MIRN593|hsa-mir-593 microRNA 593 ncRNA chr1-624 chr1 32409614 32409846 + 11.9 0.000 Intergenic AluSx|SINE|Alu -15289 NM_018045 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr18-159 chr18 47512926 47513158 + 11.9 0.000 intron (NR_147192, intron 1 of 2) intron (NR_147192, intron 1 of 2) 132546 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA chr13-231 chr13 95854943 95855175 + 11.9 0.000 intron (NM_020121, intron 34 of 38) AluJr|SINE|Alu 177920 NM_006260 5611 Hs.59214 NM_006260 ENSG00000102580 DNAJC3 ACPHD|ERdj6|HP58|P58|P58IPK|PRKRI DnaJ heat shock protein family (Hsp40) member C3 protein-coding chr4-507 chr4 6182325 6182557 + 11.9 0.000 intron (NM_144720, intron 1 of 12) MLT1A0|LTR|ERVL-MaLR 12178 NM_001306133 152789 Hs.479066 NM_144720 ENSG00000152969 JAKMIP1 Gababrbp|JAMIP1|MARLIN1 janus kinase and microtubule interacting protein 1 protein-coding chr16-635 chr16 65702038 65702270 + 11.9 0.000 Intergenic Intergenic -125854 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr17-665 chr17 73494864 73495096 + 11.9 0.000 intron (NM_001144952, intron 2 of 44) intron (NM_001144952, intron 2 of 44) -18703 NR_135635 101928251 Hs.434726 NR_135635 ENSG00000264985 LOC101928251 - uncharacterized LOC101928251 ncRNA chr1-900 chr1 39214631 39214863 + 11.9 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 130580 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr11-887 chr11 70181035 70181267 + 11.9 0.000 intron (NM_018043, intron 23 of 25) intron (NM_018043, intron 23 of 25) -22012 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr11-710 chr11 71398144 71398376 + 11.9 0.000 Intergenic Intergenic 25094 NR_038862 399923 Hs.128191 NM_001001680 ENSG00000172900 FLJ42102 - uncharacterized LOC399923 ncRNA chr1-1076 chr1 9491166 9491398 + 11.9 0.000 Intergenic Intergenic -48183 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr1-1557 chr1 206429936 206430168 + 11.9 0.000 intron (NM_015326, intron 12 of 21) intron (NM_015326, intron 12 of 21) -40424 NM_014002 9641 Hs.321045 NM_014002 ENSG00000263528 IKBKE IKK-E|IKK-i|IKKE|IKKI inhibitor of nuclear factor kappa B kinase subunit epsilon protein-coding chrX-282 chrX 132411442 132411674 + 11.9 0.000 intron (NM_001170704, intron 2 of 8) MIR3|SINE|MIR 2017 NM_001170702 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr1-1352 chr1 47432309 47432541 + 11.9 0.000 non-coding (NR_026878, exon 1 of 1) non-coding (NR_026878, exon 1 of 1) 2216 NR_026878 84793 Hs.127762 NM_032707 ENSG00000237424 FOXD2-AS1 - FOXD2 adjacent opposite strand RNA 1 ncRNA chr3-839 chr3 127315846 127316078 + 11.9 0.000 Intergenic LTR78|LTR|ERV1 -27916 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr10-553 chr10 72818697 72818929 + 11.9 0.000 intron (NR_073062, intron 3 of 9) AluSq2|SINE|Alu -74926 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding chr15-442 chr15 76359091 76359323 + 11.9 0.000 intron (NR_148227, intron 30 of 32) intron (NR_148227, intron 30 of 32) 22434 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding chr16-318 chr16 63017241 63017473 + 11.9 0.000 Intergenic AluY|SINE|Alu -980919 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr19-726 chr19 50973628 50973860 + 11.9 0.000 Intergenic AluJo|SINE|Alu -4153 NM_001319948 5653 Hs.79361 NM_002774 ENSG00000167755 KLK6 Bssp|Klk7|PRSS18|PRSS9|SP59|hK6 kallikrein related peptidase 6 protein-coding chr13-258 chr13 28450115 28450347 + 11.9 0.000 intron (NM_002019, intron 3 of 29) intron (NM_002019, intron 3 of 29) 44897 NM_001160031 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr9-697 chr9 128161406 128161638 + 11.9 0.000 intron (NM_024112, intron 1 of 1) intron (NM_024112, intron 1 of 1) 1257 NM_024112 79095 Hs.522412 NM_024112 ENSG00000171159 C9orf16 EST00098 chromosome 9 open reading frame 16 protein-coding chr22-393 chr22 36420673 36420905 + 11.9 0.000 Intergenic AluSz|SINE|Alu -32722 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr2-220 chr2 56183929 56184161 + 11.9 0.000 promoter-TSS (NM_001348512) promoter-TSS (NM_001348512) 55 NM_001080433 114800 Hs.117136 NM_001080433 ENSG00000055813 CCDC85A - coiled-coil domain containing 85A protein-coding chr2-1038 chr2 144126152 144126384 + 11.9 0.000 intron (NM_001354355, intron 7 of 13) MER5B|DNA|hAT-Charlie 85311 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr12-288 chr12 47782744 47782976 + 11.9 0.000 TTS (NM_017842) TTS (NM_017842) 9622 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chrX-103 chrX 3663585 3663817 + 11.9 0.000 intron (NR_046643, intron 1 of 2) L2|LINE|L2 4214 NR_046643 100873944 NR_046643 ENSG00000236188 PRKX-AS1 - PRKX antisense RNA 1 ncRNA chr1-864 chr1 21938528 21938760 + 11.9 0.000 Intergenic Intergenic -1334 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr3-619 chr3 39112204 39112436 + 11.9 0.000 intron (NM_001105513, intron 4 of 27) intron (NM_001105513, intron 4 of 27) -3957 NM_031899 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding chr3-885 chr3 159139330 159139562 + 11.9 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) 70127 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr2-926 chr2 42049030 42049262 + 11.9 0.000 intron (NM_138370, intron 1 of 6) intron (NM_138370, intron 1 of 6) 1125 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr3-763 chr3 52021172 52021404 + 11.9 0.000 Intergenic Intergenic -25393 NM_000992 6159 Hs.425125 NM_000992 ENSG00000162244 RPL29 HIP|HUMRPL29|L29|RPL29P10|RPL29_3_370 ribosomal protein L29 protein-coding chr1-822 chr1 2074008 2074240 + 11.9 0.000 5' UTR (NM_001350805, exon 1 of 15) 5' UTR (NM_001350805, exon 1 of 15) 138 NM_001242874 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr2-1097 chr2 202017989 202018221 + 11.9 0.000 Intergenic Intergenic -16482 NM_003507 8324 Hs.173859 NM_003507 ENSG00000155760 FZD7 FzE3 frizzled class receptor 7 protein-coding chr1-1404 chr1 90636093 90636325 + 11.9 0.000 Intergenic L1PA7|LINE|L1 -21541 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr9-559 chr9 136720128 136720360 + 11.9 0.000 intron (NM_152421, intron 2 of 4) intron (NM_152421, intron 2 of 4) 5993 NR_002975 677824 Hs.495480 NR_002975 ENSG00000280496 SNORA17B ACA43|SNORA43 small nucleolar RNA, H/ACA box 17B snoRNA chr11-908 chr11 74473382 74473614 + 11.9 0.000 Intergenic LTR33|LTR|ERVL -5943 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr19-612 chr19 18890683 18890915 + 11.9 0.000 intron (NM_021267, intron 2 of 7) AluJr|SINE|Alu 5359 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chrX-127 chrX 70857053 70857285 + 11.9 0.000 intron (NM_001003811, intron 6 of 30) intron (NM_001003811, intron 6 of 30) -10874 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr2-781 chr2 73076010 73076242 + 11.9 0.000 exon (NM_015470, exon 4 of 5) exon (NM_015470, exon 4 of 5) -4290 NM_144579 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr12-458 chr12 107332633 107332865 + 11.9 0.000 intron (NM_001347944, intron 1 of 14) intron (NM_001347944, intron 1 of 14) 12161 NM_001347944 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr18-196 chr18 23148339 23148571 + 11.9 0.000 intron (NM_001100619, intron 1 of 9) intron (NM_001100619, intron 1 of 9) -7370 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr13-210 chr13 21021494 21021726 + 11.9 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 39976 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr1-735 chr1 25520090 25520322 + 11.9 0.000 Intergenic L2b|LINE|L2 -23379 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr15-350 chr15 24884700 24884932 + 11.9 0.000 intron (NM_001349461, intron 1 of 12) MER41D|LTR|ERV1 28304 NM_001349461 6638 Hs.564847 NM_003097 ENSG00000128739 SNRPN HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN|sm-N small nuclear ribonucleoprotein polypeptide N protein-coding chr22-405 chr22 39717432 39717664 + 11.9 0.000 Intergenic MER63A|DNA|hAT-Blackjack 146795 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr9-705 chr9 130215748 130215980 + 11.9 0.000 intron (NM_014286, intron 2 of 7) intron (NM_014286, intron 2 of 7) 15464 NM_001128826 23413 Hs.642946 NM_014286 ENSG00000107130 NCS1 FLUP|FREQ neuronal calcium sensor 1 protein-coding chr1-829 chr1 3568517 3568749 + 11.9 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) -7843 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr19-476 chr19 18888467 18888699 + 11.9 0.000 intron (NM_021267, intron 2 of 7) AluSp|SINE|Alu 7575 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr15-214 chr15 68278634 68278866 + 11.9 0.000 intron (NM_015322, intron 1 of 1) intron (NM_015322, intron 1 of 1) 1005 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr17-864 chr17 79496894 79497126 + 11.9 0.000 intron (NM_001350451, intron 1 of 14) intron (NM_001350451, intron 1 of 14) 19138 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr1-1558 chr1 206513558 206513790 + 11.9 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) 6143 NM_182664 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr17-788 chr17 42980979 42981211 + 11.9 0.000 promoter-TSS (NM_001136042) promoter-TSS (NM_001136042) 530 NM_001321381 146923 Hs.632255 NM_173079 ENSG00000198863 RUNDC1 - RUN domain containing 1 protein-coding chr10-750 chr10 96718603 96718835 + 11.9 0.000 intron (NM_152309, intron 1 of 16) intron (NM_152309, intron 1 of 16) 1795 NM_152309 118788 Hs.310456 NM_152309 ENSG00000155629 PIK3AP1 BCAP phosphoinositide-3-kinase adaptor protein 1 protein-coding chr17-807 chr17 51661531 51661763 + 11.9 0.000 intron (NM_001082533, intron 5 of 9) intron (NM_001082533, intron 5 of 9) 226220 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr8-140 chr8 69831158 69831390 + 11.9 0.000 intron (NM_001146009, intron 1 of 7) AluSx|SINE|Alu 1895 NM_001146009 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr7-651 chr7 2687256 2687488 + 11.9 0.000 promoter-TSS (NM_001284355) promoter-TSS (NM_001284355) -830 NM_001321766 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr9-504 chr9 137486656 137486888 + 11.9 0.000 intron (NM_001098537, intron 20 of 34) L2|LINE|L2 -27438 NM_001178064 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr14-430 chr14 74422581 74422813 + 11.9 0.000 intron (NM_001105579, intron 1 of 3) intron (NM_001105579, intron 1 of 3) 3513 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr11-972 chr11 121655505 121655737 + 11.9 0.000 Intergenic Intergenic 203307 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr20-257 chr20 18208445 18208677 + 11.9 0.000 Intergenic AluJb|SINE|Alu 63462 NR_028402 57325 Hs.488051 NM_020536 ENSG00000149474 KAT14 ATAC2|CRP2BP|CSRP2BP|PRO1194|dJ717M23.1 lysine acetyltransferase 14 protein-coding chr8-484 chr8 38387012 38387244 + 11.9 0.000 promoter-TSS (NM_001199660) promoter-TSS (NM_001199660) -3 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr16-350 chr16 1936684 1936916 + 11.9 0.000 Intergenic AluSz6|SINE|Alu 6526 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr7-351 chr7 22632938 22633170 + 11.9 0.000 Intergenic Intergenic 32479 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA chr14-478 chr14 103720711 103720943 + 11.9 0.000 intron (NM_024071, intron 1 of 6) AluSx1|SINE|Alu 5083 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr20-299 chr20 524581 524813 + 11.9 0.000 intron (NM_001362771, intron 1 of 13) AluSx1|SINE|Alu 19093 NM_001362770 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr9-519 chr9 77970155 77970387 + 11.9 0.000 intron (NM_002072, intron 1 of 6) intron (NM_002072, intron 1 of 6) 61540 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr22-394 chr22 37542024 37542256 + 11.9 0.000 Intergenic Intergenic -18340 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr8-226 chr8 107909109 107909341 + 11.9 0.000 intron (NM_001282863, intron 4 of 4) MIR3|SINE|MIR 172714 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding chrX-224 chrX 42311617 42311849 + 11.9 0.000 Intergenic L1PA8A|LINE|L1 -388179 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr11-337 chr11 8208194 8208426 + 11.9 0.000 Intergenic MIR|SINE|MIR -39285 NR_144497 79608 Hs.231850 NM_024557 ENSG00000166405 RIC3 AYST720|PRO1385 RIC3 acetylcholine receptor chaperone protein-coding chr13-117 chr13 52370930 52371162 + 11.9 0.000 Intergenic AluSz6|SINE|Alu 35126 NM_199263 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr20-44 chr20 3408076 3408308 + 11.9 0.000 promoter-TSS (NM_001009984) promoter-TSS (NM_001009984) -530 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr8-187 chr8 38294954 38295186 + 11.9 0.000 intron (NM_023034, intron 16 of 23) AluY|SINE|Alu -25838 NM_001354454 84513 Hs.567619 NM_032483 ENSG00000147535 PLPP5 DPPL1|HTPAP|PPAPDC1B phospholipid phosphatase 5 protein-coding chr2-720 chr2 218321599 218321831 + 11.7 0.000 intron (NM_015488, intron 2 of 9) AluSc8|SINE|Alu -1464 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chr7-637 chr7 1220059 1220291 + 11.7 0.000 Intergenic Intergenic -12697 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr1-806 chr1 219059758 219059990 + 11.7 0.000 intron (NR_031644, intron 6 of 6) AluSp|SINE|Alu 113914 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-DT LYPLAL1-AS1 LYPLAL1 divergent transcript ncRNA chr10-161 chr10 115545124 115545356 + 11.7 0.000 intron (NM_207303, intron 25 of 28) AluYc|SINE|Alu 451875 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr6-453 chr6 109713354 109713586 + 11.7 0.000 intron (NM_014845, intron 1 of 22) L1PA13|LINE|L1 22249 NM_014845 9896 Hs.529959 NM_014845 ENSG00000112367 FIG4 ALS11|BTOP|CMT4J|KIAA0274|SAC3|YVS|dJ249I4.1 FIG4 phosphoinositide 5-phosphatase protein-coding chr10-686 chr10 69908666 69908898 + 11.7 0.000 intron (NM_080801, intron 16 of 38) intron (NM_080801, intron 16 of 38) 106876 NM_001368885 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr17-245 chr17 43545386 43545618 + 11.7 0.000 TTS (NM_001322219) TTS (NM_001322219) 397 NM_001369366 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr8-413 chr8 123005379 123005611 + 11.7 0.000 Intergenic Intergenic 20277 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding chr2-291 chr2 235583780 235584012 + 11.7 0.000 intron (NM_001037131, intron 1 of 17) AluJo|SINE|Alu -65975 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr2-654 chr2 111659602 111659834 + 11.7 0.000 Intergenic MER21C|LTR|ERVL 111416 NR_039928 100616370 NR_039928 ENSG00000264793 MIR4771-1 - microRNA 4771-1 ncRNA chr13-319 chr13 80011735 80011967 + 11.7 0.000 intron (NR_104138, intron 1 of 1) intron (NR_104138, intron 1 of 1) 774 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA chr19-418 chr19 55476494 55476726 + 11.7 0.000 promoter-TSS (NM_033113) promoter-TSS (NM_033113) -7 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr19-725 chr19 49582902 49583134 + 11.7 0.000 intron (NM_000951, intron 1 of 6) AluSz|SINE|Alu 1702 NM_001316335 5639 Hs.35101 NM_000951 ENSG00000126460 PRRG2 PRGP2 proline rich and Gla domain 2 protein-coding chr8-72 chr8 102245900 102246132 + 11.7 0.000 intron (NR_125415, intron 2 of 2) AluSz|SINE|Alu 6565 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chr16-241 chr16 66533921 66534153 + 11.7 0.000 intron (NM_001172645, intron 3 of 8) MSTC|LTR|ERVL-MaLR 16085 NM_001272050 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr1-447 chr1 6602892 6603124 + 11.7 0.000 promoter-TSS (NM_014851) promoter-TSS (NM_014851) -139 NM_001324309 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr3-498 chr3 48397949 48398181 + 11.7 0.000 Intergenic MIR3|SINE|MIR 25846 NM_207102 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding chr10-357 chr10 126063212 126063444 + 11.7 0.000 intron (NM_001288974, intron 14 of 18) intron (NM_001288974, intron 14 of 18) -90055 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA chr15-427 chr15 72229790 72230022 + 11.7 0.000 promoter-TSS (NM_001206799) promoter-TSS (NM_001206799) 5 NM_001206799 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr22-316 chr22 46251168 46251400 + 11.7 0.000 promoter-TSS (NM_207327) promoter-TSS (NM_207327) -991 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chrX-161 chrX 19062068 19062300 + 11.7 0.000 intron (NM_001184833, intron 3 of 27) intron (NM_001184833, intron 3 of 27) 60284 NM_001079858 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr19-746 chr19 1558010 1558242 + 11.7 0.000 intron (NM_203304, intron 1 of 1) AluJo|SINE|Alu 9932 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding KI270730.1-3 KI270730.1 108768 109000 + 11.7 0.000 NA NA NA NA chr10-677 chr10 67504359 67504591 + 11.7 0.000 intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) -101065 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr7-220 chr7 152520699 152520931 + 11.7 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 56691 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr18-102 chr18 29988404 29988636 + 11.7 0.000 Intergenic AluSx1|SINE|Alu -310390 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr11-522 chr11 79439584 79439816 + 11.7 0.000 intron (NM_001098816, intron 1 of 33) CpG 1330 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr4-221 chr4 118835926 118836158 + 11.7 0.000 promoter-TSS (NM_001318066) promoter-TSS (NM_001318066) 84 NM_014822 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr5-532 chr5 149409661 149409893 + 11.7 0.000 intron (NR_105060, intron 1 of 4) intron (NR_105060, intron 1 of 4) 2932 NR_105059 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr4-270 chr4 148455050 148455282 + 11.7 0.000 Intergenic Intergenic -10468 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr11-777 chr11 9044381 9044613 + 11.7 0.000 intron (NM_001367977, intron 16 of 22) AluJr|SINE|Alu -40496 NM_020645 56675 Hs.523467 NM_020645 ENSG00000175352 NRIP3 C11orf14|NY-SAR-105 nuclear receptor interacting protein 3 protein-coding chr11-461 chr11 74054359 74054591 + 11.7 0.000 intron (NM_001286577, intron 26 of 32) intron (NM_001286577, intron 26 of 32) -45238 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr2-974 chr2 74482424 74482656 + 11.7 0.000 promoter-TSS (NM_022492) promoter-TSS (NM_022492) 458 NM_032779 84865 Hs.430199 NM_032779 ENSG00000135637 CCDC142 - coiled-coil domain containing 142 protein-coding chr6-454 chr6 110052692 110052924 + 11.7 0.000 Intergenic Intergenic 74497 NM_005284 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr7-548 chr7 135169899 135170131 + 11.7 0.000 promoter-TSS (NM_001243753) promoter-TSS (NM_001243753) 498 NM_001363330 78996 Hs.643113 NM_024033 ENSG00000122783 CYREN C7orf49|MRI|MRI-2 cell cycle regulator of NHEJ protein-coding chr7-485 chr7 48442939 48443171 + 11.7 0.000 intron (NM_152701, intron 42 of 61) MLT1B|LTR|ERVL-MaLR 271597 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr8-425 chr8 142032907 142033139 + 11.7 0.000 Intergenic LTR39|LTR|ERV1 -143316 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA chr2-631 chr2 70142210 70142442 + 11.7 0.000 Intergenic CpG -17010 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr14-155 chr14 34570489 34570721 + 11.7 0.000 intron (NM_001366519, intron 10 of 12) AluSg7|SINE|Alu -14216 NR_004408 26869 NR_004408 ENSG00000207513 RNU1-3 HSD4|RNU1G3 RNA, U1 small nuclear 3 snRNA chr16-526 chr16 78110880 78111112 + 11.7 0.000 intron (NM_001291997, intron 2 of 7) intron (NM_001291997, intron 2 of 7) 11342 NM_016373 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr6-529 chr6 42048674 42048906 + 11.7 0.000 5' UTR (NM_001136017, exon 1 of 5) 5' UTR (NM_001136017, exon 1 of 5) 104 NM_001287434 896 Hs.534307 NM_001760 ENSG00000112576 CCND3 - cyclin D3 protein-coding chr13-286 chr13 47005307 47005539 + 11.7 0.000 Intergenic A-rich|Low_complexity|Low_complexity -108347 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr2-602 chr2 39120408 39120640 + 11.7 0.000 promoter-TSS (NM_005633) promoter-TSS (NM_005633) -61 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr20-316 chr20 10434962 10435194 + 11.7 0.000 promoter-TSS (NM_170784) promoter-TSS (NM_170784) -227 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr11-987 chr11 130853263 130853495 + 11.7 0.000 intron (NR_125383, intron 3 of 5) intron (NR_125383, intron 3 of 5) 8731 NR_125383 100507431 Hs.375101 NR_125383 LINC02551 - long intergenic non-protein coding RNA 2551 ncRNA chr12-542 chr12 113665436 113665668 + 11.7 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 108131 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA chr3-774 chr3 57789204 57789436 + 11.7 0.000 intron (NM_001304420, intron 1 of 21) MER31A|LTR|ERV1 32064 NM_001304420 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr1-1390 chr1 84960554 84960786 + 11.7 0.000 intron (NM_153259, intron 2 of 13) intron (NM_153259, intron 2 of 13) 36443 NM_153259 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr16-394 chr16 1351592 1351824 + 11.7 0.000 promoter-TSS (NM_032520) promoter-TSS (NM_032520) 170 NM_001001410 115939 Hs.134846 NM_001001410 ENSG00000007520 TSR3 C16orf42 TSR3 ribosome maturation factor protein-coding chr1-1575 chr1 219032402 219032634 + 11.7 0.000 intron (NR_031644, intron 6 of 6) Tigger3b|DNA|TcMar-Tigger -114007 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA chr10-804 chr10 121849699 121849931 + 11.7 0.000 intron (NM_001001976, intron 8 of 11) Charlie17a|DNA|hAT-Charlie 78216 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr19-758 chr19 4212672 4212904 + 11.7 0.000 intron (NM_133475, intron 15 of 21) intron (NM_133475, intron 15 of 21) -16735 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr11-992 chr11 133986423 133986655 + 11.7 0.000 Intergenic Intergenic -29743 NM_001277285 22997 Hs.204121 NM_014987 ENSG00000080854 IGSF9B - immunoglobulin superfamily member 9B protein-coding chr8-380 chr8 25426302 25426534 + 11.7 0.000 Intergenic MLT2A1|LTR|ERVL -1378 NM_000825 2796 Hs.82963 NM_000825 ENSG00000147437 GNRH1 GNRH|GRH|LHRH|LNRH gonadotropin releasing hormone 1 protein-coding chr3-221 chr3 93924551 93924783 + 11.7 0.000 intron (NM_000313, intron 2 of 14) AluJo|SINE|Alu 49414 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr9-554 chr9 133605556 133605788 + 11.7 0.000 Intergenic Intergenic -25426 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr19-853 chr19 46431958 46432190 + 11.5 0.000 Intergenic MLT2F|LTR|ERVL -18510 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr22-272 chr22 28605955 28606187 + 11.5 0.000 intron (NM_001145418, intron 2 of 22) L1MA7|LINE|L1 73794 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr10-364 chr10 7572555 7572787 + 11.5 0.000 intron (NM_001001851, intron 11 of 11) intron (NM_001001851, intron 11 of 11) 47002 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr7-665 chr7 6646056 6646288 + 11.5 0.000 intron (NM_001278559, intron 8 of 8) intron (NM_001278559, intron 8 of 8) 8854 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding chr10-573 chr10 102069800 102070032 + 11.5 0.000 Intergenic AluSp|SINE|Alu 4549 NM_024747 79803 Hs.125133 NM_024747 ENSG00000166189 HPS6 BLOC2S3 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 protein-coding chr1-1222 chr1 6166395 6166627 + 11.5 0.000 intron (NM_015557, intron 2 of 41) intron (NM_015557, intron 2 of 41) 13810 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr8-164 chr8 69936753 69936985 + 11.5 0.000 Intergenic AluSz6|SINE|Alu -101891 NM_030958 81796 Hs.152460 NM_030958 ENSG00000137571 SLCO5A1 OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15 solute carrier organic anion transporter family member 5A1 protein-coding chr5-212 chr5 132908988 132909220 + 11.5 0.000 intron (NM_014423, intron 5 of 20) intron (NM_014423, intron 5 of 20) 35436 NM_052971 116842 Hs.337588 NM_052971 ENSG00000164406 LEAP2 LEAP-2 liver enriched antimicrobial peptide 2 protein-coding chr9-372 chr9 127141429 127141661 + 11.5 0.000 intron (NM_001190729, intron 8 of 17) Charlie18a|DNA|hAT-Charlie -18910 NM_012098 23452 Hs.653262 NM_012098 ENSG00000136859 ANGPTL2 ARP2|HARP angiopoietin like 2 protein-coding chr4-485 chr4 1752488 1752720 + 11.5 0.000 Intergenic (GGCACA)n|Simple_repeat|Simple_repeat 31083 NM_006342 10460 Hs.104019 NM_006342 ENSG00000013810 TACC3 ERIC-1|ERIC1 transforming acidic coiled-coil containing protein 3 protein-coding chr14-449 chr14 89333665 89333897 + 11.5 0.000 intron (NM_001085471, intron 3 of 6) L1MA9|LINE|L1 83452 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr3-376 chr3 93933870 93934102 + 11.5 0.000 intron (NM_001314077, intron 1 of 15) AluSx4|SINE|Alu 40095 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr2-564 chr2 229656940 229657172 + 11.5 0.000 intron (NM_139072, intron 1 of 12) L1MA9|LINE|L1 57499 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr4-296 chr4 76212859 76213091 + 11.5 0.000 intron (NM_001204255, intron 1 of 8) intron (NM_001204255, intron 1 of 8) 849 NM_005506 950 Hs.349656 NM_005506 ENSG00000138760 SCARB2 AMRF|CD36L2|EPM4|HLGP85|LGP85|LIMP-2|LIMPII|SR-BII scavenger receptor class B member 2 protein-coding chr2-451 chr2 54999250 54999482 + 11.5 0.000 intron (NM_153828, intron 1 of 6) intron (NM_153828, intron 1 of 6) 10906 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr15-312 chr15 41417097 41417329 + 11.5 0.000 exon (NM_015138, exon 1 of 18) exon (NM_015138, exon 1 of 18) 109 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr12-553 chr12 131908142 131908374 + 11.5 0.000 intron (NM_003565, intron 5 of 27) CpG 13636 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding KI270730.1-5 KI270730.1 108107 108339 + 11.5 0.000 NA NA NA NA chr2-780 chr2 70543394 70543626 + 11.5 0.000 intron (NM_003236, intron 1 of 5) AluSz6|SINE|Alu 9936 NM_001308158 7039 Hs.170009 NM_003236 ENSG00000163235 TGFA TFGA transforming growth factor alpha protein-coding chr8-474 chr8 33485271 33485503 + 11.5 0.000 intron (NM_032509, intron 1 of 9) CpG 205 NM_032509 84549 Hs.583805 NM_032509 ENSG00000198042 MAK16 MAK16L|RBM13 MAK16 homolog protein-coding chr18-73 chr18 47299494 47299726 + 11.5 0.000 intron (NR_147192, intron 1 of 2) L1ME2z|LINE|L1 13886 NR_147192 110175910 Hs.639112 NR_147192 ENSG00000267761 MIR4527HG - MIR4527 host gene ncRNA chr13-53 chr13 46552964 46553196 + 11.5 0.000 promoter-TSS (NM_015116) promoter-TSS (NM_015116) -90 NM_001164213 23143 Hs.507971 NM_015116 ENSG00000136141 LRCH1 CHDC1|NP81 leucine rich repeats and calponin homology domain containing 1 protein-coding chr18-152 chr18 25725904 25726136 + 11.5 0.000 Intergenic MIRc|SINE|MIR 364593 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr16-709 chr16 87752236 87752468 + 11.5 0.000 intron (NM_001184856, intron 4 of 10) AluSc5|SINE|Alu 13634 NM_001351937 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr1-1540 chr1 202123949 202124181 + 11.5 0.000 intron (NM_004767, intron 1 of 1) intron (NM_004767, intron 1 of 1) 1148 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr10-565 chr10 92283650 92283882 + 11.5 0.000 intron (NM_014912, intron 1 of 9) AluSx1|SINE|Alu 7312 NM_014912 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr4-297 chr4 83397353 83397585 + 11.5 0.000 Intergenic AluSp|SINE|Alu 58354 NM_133636 113510 Hs.480101 NM_133636 ENSG00000163312 HELQ HEL308 helicase, POLQ like protein-coding chr19-883 chr19 55491921 55492153 + 11.5 0.000 intron (NM_001144950, intron 6 of 13) intron (NM_001144950, intron 6 of 13) 3601 NM_001144950 284297 Hs.554182 NM_182571 ENSG00000179954 SSC5D S5D-SRCRB scavenger receptor cysteine rich family member with 5 domains protein-coding chr4-242 chr4 47254332 47254564 + 11.5 0.000 intron (NM_000812, intron 4 of 8) AluY|SINE|Alu 209254 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr20-196 chr20 22238874 22239106 + 11.5 0.000 Intergenic Intergenic 43811 NR_110615 101929663 Hs.143562 NR_110615 ENSG00000225321 LINC01427 - long intergenic non-protein coding RNA 1427 ncRNA chr10-327 chr10 72239171 72239403 + 11.5 0.000 Intergenic AluSx|SINE|Alu -22153 NR_045564 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr16-686 chr16 84334098 84334330 + 11.5 0.000 Intergenic L1M1|LINE|L1 -34309 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr3-428 chr3 39152583 39152815 + 11.5 0.000 intron (NM_001320560, intron 1 of 4) intron (NM_001320560, intron 1 of 4) 892 NM_033027 64651 Hs.370950 NM_033027 ENSG00000144655 CSRNP1 AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1 cysteine and serine rich nuclear protein 1 protein-coding chr5-695 chr5 139247829 139248061 + 11.5 0.000 Intergenic MIRc|SINE|MIR -25807 NM_001282278 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr11-597 chr11 64869717 64869949 + 11.5 0.000 intron (NM_006795, intron 2 of 4) intron (NM_006795, intron 2 of 4) 8776 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr15-359 chr15 35199659 35199891 + 11.5 0.000 Intergenic Intergenic -37551 NR_003144 723972 Hs.631698 NR_003144 ENSG00000259516 ANP32AP1 - acidic nuclear phosphoprotein 32 family member A pseudogene 1 pseudo chr4-413 chr4 4480796 4481028 + 11.5 0.000 intron (NR_126434, intron 1 of 3) intron (NR_126434, intron 1 of 3) 788 NR_126434 104472519 Hs.691848 NR_126434 ENSG00000248221 STX18-IT1 - STX18 intronic transcript 1 ncRNA chr7-776 chr7 96773950 96774182 + 11.5 0.000 Intergenic Intergenic -64175 NM_006304 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr7-821 chr7 126175128 126175360 + 11.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 882940 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA chr2-827 chr2 179106782 179107014 + 11.5 0.000 3' UTR (NM_178123, exon 18 of 18) 3' UTR (NM_178123, exon 18 of 18) -56761 NM_173648 285025 Hs.324341 NM_173648 ENSG00000163492 CCDC141 CAMDI coiled-coil domain containing 141 protein-coding chr7-527 chr7 109388767 109388999 + 11.5 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -504296 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr15-452 chr15 84091635 84091867 + 11.5 0.000 intron (NR_036652, intron 4 of 9) intron (NR_036652, intron 4 of 9) 11564 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr9-565 chr9 1958185 1958417 + 11.5 0.000 Intergenic LTR88b|LTR|Gypsy? -57046 NM_139045 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr12-621 chr12 48903979 48904211 + 11.5 0.000 promoter-TSS (NM_033124) promoter-TSS (NM_033124) -38 NM_033124 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr7-215 chr7 133009397 133009629 + 11.5 0.000 intron (NM_001317177, intron 3 of 8) intron (NM_001317177, intron 3 of 8) 25402 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr1-570 chr1 180542183 180542415 + 11.5 0.000 Intergenic Intergenic -16675 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA chr12-352 chr12 56071803 56072035 + 11.5 0.000 Intergenic L1MB5|LINE|L1 -8106 NM_001982 2065 Hs.118681 NM_001982 ENSG00000065361 ERBB3 ErbB-3|FERLK|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3 erb-b2 receptor tyrosine kinase 3 protein-coding chr8-343 chr8 105519659 105519891 + 11.5 0.000 intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 200232 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding chr11-815 chr11 39438412 39438644 + 11.5 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 789670 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA chr3-646 chr3 76683254 76683486 + 11.5 0.000 Intergenic Intergenic -356729 NM_001290040 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr17-833 chr17 67066109 67066341 + 11.5 0.000 Intergenic Intergenic 21671 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr1-683 chr1 182121029 182121261 + 11.5 0.000 Intergenic Intergenic -59433 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr17-410 chr17 49399276 49399508 + 11.5 0.000 Intergenic AluJr4|SINE|Alu 15466 NM_001281496 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr9-600 chr9 35675956 35676188 + 11.5 0.000 exon (NM_001216, exon 4 of 11) exon (NM_001216, exon 4 of 11) 2144 NM_001216 768 Hs.63287 NM_001216 ENSG00000107159 CA9 CAIX|MN carbonic anhydrase 9 protein-coding chrX-284 chrX 134830267 134830499 + 11.5 0.000 intron (NM_138819, intron 3 of 6) AluSx1|SINE|Alu 23146 NM_001170783 159091 Hs.269127 NM_138819 ENSG00000156500 FAM122C - family with sequence similarity 122C protein-coding chr12-205 chr12 19082067 19082299 + 11.5 0.000 Intergenic AluSx1|SINE|Alu -47550 NM_001256470 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr5-542 chr5 156111623 156111855 + 11.5 0.000 Intergenic Intergenic -215018 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-677 chr1 171635127 171635359 + 11.5 0.000 TTS (NM_000261) TTS (NM_000261) 15480 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding chr1-1253 chr1 13666796 13667028 + 11.5 0.000 Intergenic L1PA11|LINE|L1 -33276 NM_001135610 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding chr1-1247 chr1 11778025 11778257 + 11.5 0.000 non-coding (NR_126000, exon 3 of 3) non-coding (NR_126000, exon 3 of 3) 1478 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr9-501 chr9 136819944 136820176 + 11.5 0.000 intron (NM_001173989, intron 1 of 7) AluSx|SINE|Alu -10897 NR_036251 100422860 NR_036251 ENSG00000265806 MIR4292 - microRNA 4292 ncRNA chr4-477 chr4 188629693 188629925 + 11.5 0.000 Intergenic L1MEc|LINE|L1 -146848 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr14-322 chr14 102912767 102912999 + 11.5 0.000 Intergenic AluSp|SINE|Alu -9773 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr10-489 chr10 103796262 103796494 + 11.5 0.000 intron (NM_014631, intron 2 of 13) AluJb|SINE|Alu 49599 NR_038940 100505839 Hs.655149 NR_038940 ENSG00000280693 SH3PXD2A-AS1 - SH3PXD2A antisense RNA 1 ncRNA chr1-1255 chr1 14685683 14685915 + 11.5 0.000 intron (NM_201628, intron 1 of 14) Tigger13a|DNA|TcMar-Tigger 87082 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr3-654 chr3 113735585 113735817 + 11.5 0.000 intron (NM_025146, intron 1 of 4) AluSz6|SINE|Alu 10548 NM_025146 80218 Hs.372378 NM_025146 ENSG00000121579 NAA50 MAK3|NAT13|NAT13P|NAT5|NAT5P|SAN|hNaa50p N(alpha)-acetyltransferase 50, NatE catalytic subunit protein-coding chr12-706 chr12 108541259 108541491 + 11.5 0.000 intron (NM_014706, intron 6 of 18) AluSx1|SINE|Alu 19798 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr14-284 chr14 58637972 58638204 + 11.5 0.000 promoter-TSS (NR_046095) promoter-TSS (NR_046095) 126 NM_001079520 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr16-589 chr16 26331417 26331649 + 11.5 0.000 Intergenic L1MC2|LINE|L1 306296 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr13-332 chr13 99893085 99893317 + 11.5 0.000 TTS (NM_206808) TTS (NM_206808) 63964 NR_120421 101927437 Hs.619936 NR_120421 LOC101927437 - uncharacterized LOC101927437 ncRNA chr11-978 chr11 123056828 123057060 + 11.3 0.000 TTS (NM_153201) TTS (NM_153201) 1212 NR_003125 85391 NR_003125 ENSG00000200879 SNORD14E - small nucleolar RNA, C/D box 14E snoRNA chr12-637 chr12 52073617 52073849 + 11.3 0.000 exon (NM_021934, exon 3 of 4) exon (NM_021934, exon 3 of 4) 3755 NM_001098673 60673 Hs.9911 NM_021934 ENSG00000123395 ATG101 C12orf44 autophagy related 101 protein-coding chr15-227 chr15 90101989 90102221 + 11.3 0.000 promoter-TSS (NR_149130) promoter-TSS (NR_149130) -27 NR_149130 105370966 NR_149130 IDH2-DT - IDH2 divergent transcript ncRNA chr5-249 chr5 132293587 132293819 + 11.3 0.000 promoter-TSS (NM_003059) promoter-TSS (NM_003059) -691 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr6-624 chr6 151069044 151069276 + 11.3 0.000 intron (NR_146719, intron 27 of 28) intron (NR_146719, intron 27 of 28) -33515 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr15-114 chr15 17082071 17082303 + 11.3 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3200557 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr11-961 chr11 118902461 118902693 + 11.3 0.000 exon (NM_182557, exon 6 of 8) exon (NM_182557, exon 6 of 8) 7965 NM_182557 283149 Hs.414740 NM_182557 ENSG00000186174 BCL9L B9L|BCL9-2|DLNB11 BCL9 like protein-coding chr20-332 chr20 32193647 32193879 + 11.3 0.000 3' UTR (NM_002657, exon 3 of 3) 3' UTR (NM_002657, exon 3 of 3) -3403 NR_002781 128854 Hs.647447 NR_002781 ENSG00000235217 TSPY26P TSPYL3|bA392M18.1 testis specific protein Y-linked 26, pseudogene pseudo chr7-119 chr7 138375883 138376115 + 11.3 0.000 Intergenic AluSp|SINE|Alu -84260 NM_003852 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr11-763 chr11 1360301 1360533 + 11.3 0.000 Intergenic ERVL-E-int|LTR|ERVL -29517 NM_001256627 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr4-391 chr4 156241558 156241790 + 11.3 0.000 Intergenic Intergenic -287808 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr16-429 chr16 31079399 31079631 + 11.3 0.000 exon (NM_014699, exon 2 of 3) exon (NM_014699, exon 2 of 3) 5093 NM_014699 9726 Hs.119273 NM_014699 ENSG00000167395 ZNF646 - zinc finger protein 646 protein-coding chr3-362 chr3 48497826 48498058 + 11.3 0.000 intron (NM_001272065, intron 2 of 5) L1MEd|LINE|L1 6108 NM_001272068 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr9-558 chr9 136718162 136718394 + 11.3 0.000 intron (NM_152421, intron 2 of 4) intron (NM_152421, intron 2 of 4) 5706 NM_152421 138311 Hs.741305 NM_152421 ENSG00000165716 DIPK1B C9orf136|FAM69B|pp6977 divergent protein kinase domain 1B protein-coding chr5-151 chr5 32161357 32161589 + 11.3 0.000 intron (NM_022130, intron 1 of 3) intron (NM_022130, intron 1 of 3) 12846 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr17-756 chr17 28752099 28752331 + 11.3 0.000 Intergenic AluSq|SINE|Alu 8204 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chrX-205 chrX 23208721 23208953 + 11.3 0.000 intron (NR_073010, intron 2 of 11) L1PA10|LINE|L1 84309 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA chr9-668 chr9 121701113 121701345 + 11.3 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -41556 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr21-157 chr21 43910704 43910936 + 11.3 0.000 intron (NM_001369881, intron 2 of 9) intron (NM_001369881, intron 2 of 9) -5968 NM_001369880 56894 Hs.248785 NM_020132 ENSG00000160216 AGPAT3 1-AGPAT 3|LPAAT-GAMMA1|LPAAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 protein-coding chr1-1564 chr1 209062530 209062762 + 11.3 0.000 Intergenic MLT1J|LTR|ERVL-MaLR 90192 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr20-19 chr20 31187062 31187294 + 11.3 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -70486 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr16-331 chr16 78228208 78228440 + 11.3 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 128670 NM_016373 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr13-167 chr13 27424483 27424715 + 11.3 0.000 promoter-TSS (NM_002097) promoter-TSS (NM_002097) -20 NM_002097 2971 Hs.445977 NM_002097 ENSG00000122034 GTF3A AP2|TFIIIA general transcription factor IIIA protein-coding chr11-826 chr11 57913236 57913468 + 11.3 0.000 Intergenic AluSx1|SINE|Alu -110529 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr10-706 chr10 77711350 77711582 + 11.3 0.000 Intergenic CpG -73658 NM_001161353 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr20-189 chr20 5292369 5292601 + 11.3 0.000 Intergenic Intergenic 24247 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr7-824 chr7 128400852 128401084 + 11.3 0.000 intron (NM_183243, intron 4 of 14) intron (NM_183243, intron 4 of 14) 5027 NM_001142575 3614 Hs.654401 NM_000883 ENSG00000106348 IMPDH1 IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608 inosine monophosphate dehydrogenase 1 protein-coding chr1-453 chr1 14111542 14111774 + 11.3 0.000 Intergenic Intergenic 308315 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr1-1456 chr1 154851481 154851713 + 11.3 0.000 intron (NM_001204087, intron 1 of 8) L2a|LINE|L2 8279 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr5-459 chr5 153659430 153659662 + 11.3 0.000 intron (NM_000827, intron 5 of 15) intron (NM_000827, intron 5 of 15) 167374 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr3-736 chr3 34298881 34299113 + 11.3 0.000 Intergenic Intergenic 500367 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr10-612 chr10 14174304 14174536 + 11.3 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 100136 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr12-598 chr12 27333242 27333474 + 11.3 0.000 intron (NM_001248003, intron 1 of 14) CpG 522 NM_001248004 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding chr8-93 chr8 37182697 37182929 + 11.3 0.000 Intergenic Intergenic 311100 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr4-493 chr4 2592032 2592264 + 11.3 0.000 intron (NM_001366318, intron 1 of 20) AluSx3|SINE|Alu -33284 NM_001256668 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr17-717 chr17 4379412 4379644 + 11.3 0.000 Intergenic Intergenic -12854 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr5-244 chr5 74715877 74716109 + 11.3 0.000 intron (NM_001292004, intron 8 of 13) AluSx1|SINE|Alu 30760 NM_000521 3074 Hs.69293 NM_000521 ENSG00000049860 HEXB ENC-1AS|HEL-248|HEL-S-111 hexosaminidase subunit beta protein-coding chr19-684 chr19 13061538 13061770 + 11.3 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 36875 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr13-232 chr13 96863508 96863740 + 11.3 0.000 Intergenic Intergenic 120548 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA chr22-341 chr22 36276052 36276284 + 11.3 0.000 Intergenic Intergenic 10739 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr19-738 chr19 977026 977258 + 11.3 0.000 Intergenic Intergenic -7186 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr3-743 chr3 38347781 38348013 + 11.3 0.000 intron (NR_146068, intron 1 of 16) intron (NR_146068, intron 1 of 16) 1112 NR_146068 9942 Hs.659985 NM_005108 ENSG00000093217 XYLB - xylulokinase protein-coding chr12-356 chr12 68103753 68103985 + 11.3 0.000 Intergenic Intergenic 55871 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr4-185 chr4 90946486 90946718 + 11.3 0.000 intron (NM_001145065, intron 9 of 10) AluSx1|SINE|Alu 711571 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr12-577 chr12 5798061 5798293 + 11.3 0.000 intron (NM_001278596, intron 10 of 25) intron (NM_001278596, intron 10 of 25) 147082 NM_001278596 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr2-248 chr2 222861321 222861553 + 11.3 0.000 intron (NM_001354159, intron 1 of 14) CpG 401 NM_203372 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr6-462 chr6 131320933 131321165 + 11.3 0.000 Intergenic AluSx|SINE|Alu 70645 NM_004842 9465 Hs.486483 NM_004842 ENSG00000118507 AKAP7 AKAP15|AKAP18 A-kinase anchoring protein 7 protein-coding chr17-566 chr17 50264753 50264985 + 11.3 0.000 Intergenic Intergenic -6537 NM_001168215 162461 Hs.224630 NM_153229 ENSG00000167105 TMEM92 - transmembrane protein 92 protein-coding chr20-397 chr20 62689042 62689274 + 11.3 0.000 Intergenic Intergenic -19678 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr19-838 chr19 42376375 42376607 + 11.3 0.000 exon (NM_001410, exon 41 of 41) exon (NM_001410, exon 41 of 41) 13806 NM_032488 84518 Hs.148590 NM_032488 ENSG00000105427 CNFN PLAC8L2 cornifelin protein-coding chr11-213 chr11 9778229 9778461 + 11.3 0.000 TTS (NM_030962) TTS (NM_030962) -18812 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chrX-213 chrX 30791306 30791538 + 11.3 0.000 Intergenic (GCCTT)n|Simple_repeat|Simple_repeat -43201 NR_145449 727682 NR_145449 TAB3-AS1 CXorf29 TAB3 antisense RNA 1 ncRNA chr3-387 chr3 137616337 137616569 + 11.3 0.000 Intergenic AluJr|SINE|Alu -147862 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr9-231 chr9 124364404 124364636 + 11.3 0.000 intron (NM_002799, intron 6 of 7) intron (NM_002799, intron 6 of 7) 11047 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr3-771 chr3 55486462 55486694 + 11.3 0.000 intron (NM_003392, intron 1 of 4) CpG 1064 NM_003392 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr19-434 chr19 15588676 15588908 + 11.3 0.000 Intergenic MLT2B2|LTR|ERVL -26426 NM_007253 11283 Hs.268554 NM_007253 ENSG00000186526 CYP4F8 CPF8|CYPIVF8 cytochrome P450 family 4 subfamily F member 8 protein-coding chr14-149 chr14 69611569 69611801 + 11.3 0.000 promoter-TSS (NM_014734) promoter-TSS (NM_014734) 89 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr11-758 chr11 1225596 1225828 + 11.3 0.000 exon (NM_002458, exon 2 of 49) exon (NM_002458, exon 2 of 49) 2646 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr21-151 chr21 39445869 39446101 + 11.3 0.000 5' UTR (NM_001317741, exon 1 of 6) 5' UTR (NM_001317741, exon 1 of 6) 110 NM_001317741 6450 Hs.473847 NM_007341 ENSG00000185437 SH3BGR 21-GARP SH3 domain binding glutamate rich protein protein-coding chr11-910 chr11 75642140 75642372 + 11.3 0.000 intron (NM_207577, intron 1 of 2) MER63C|DNA|hAT-Blackjack 26178 NM_033063 4135 Hs.585540 NM_033063 ENSG00000171533 MAP6 MAP6-N|MTAP6|N-STOP|STOP microtubule associated protein 6 protein-coding chr5-742 chr5 177304056 177304288 + 11.3 0.000 promoter-TSS (NM_130781) promoter-TSS (NM_130781) 373 NM_013237 27166 Hs.744904 NM_013237 ENSG00000169230 PRELID1 CGI-106|PRELI|PX19|SBBI12 PRELI domain containing 1 protein-coding chr1-1376 chr1 69952774 69953006 + 11.3 0.000 intron (NM_001370785, intron 8 of 26) L2a|LINE|L2 33568 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo chr10-505 chr10 124498517 124498749 + 11.3 0.000 TTS (NM_001318332) TTS (NM_001318332) 36810 NM_001167880 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr12-331 chr12 129647054 129647286 + 11.3 0.000 intron (NM_133448, intron 2 of 8) L1ME3C|LINE|L1 256855 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr11-804 chr11 29120083 29120315 + 11.3 0.000 Intergenic Intergenic -474214 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr12-602 chr12 29464518 29464750 + 11.1 0.000 non-coding (NR_073170, exon 3 of 3) non-coding (NR_073170, exon 3 of 3) 35059 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding chr13-350 chr13 113582784 113583016 + 11.1 0.000 Intergenic Intergenic -1788 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr5-611 chr5 61314106 61314338 + 11.1 0.000 Intergenic Intergenic -18036 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr11-441 chr11 63910488 63910720 + 11.1 0.000 TTS (NM_001363648) TTS (NM_001363648) 6560 NM_001363648 283248 Hs.98788 NM_173587 ENSG00000167771 RCOR2 - REST corepressor 2 protein-coding chr11-660 chr11 134514321 134514553 + 11.1 0.000 Intergenic Intergenic 77955 NR_033852 283177 Hs.504390 NR_033852 LOC283177 - uncharacterized LOC283177 ncRNA chr1-1471 chr1 156882372 156882604 + 11.1 0.000 TTS (NM_001012331) TTS (NM_001012331) -11230 NM_001353682 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr2-657 chr2 118142986 118143218 + 11.1 0.000 Intergenic AluSx1|SINE|Alu 43284 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA chrX-87 chrX 154407592 154407824 + 11.1 0.000 intron (NM_001009934, intron 1 of 7) AluSc|SINE|Alu 1546 NM_001303620 1774 Hs.401929 NM_006730 ENSG00000013563 DNASE1L1 DNAS1L1|DNASEX|DNL1L|G4.8|XIB deoxyribonuclease 1 like 1 protein-coding chr10-639 chr10 33193363 33193595 + 11.1 0.000 intron (NM_001244973, intron 12 of 16) intron (NM_001244973, intron 12 of 16) -76672 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr10-707 chr10 78043414 78043646 + 11.1 0.000 intron (NM_001142285, intron 4 of 4) intron (NM_001142285, intron 4 of 4) 9667 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding chr6-476 chr6 161443097 161443329 + 11.1 0.000 intron (NM_004562, intron 9 of 11) AluSx|SINE|Alu -27764 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr11-484 chr11 128693152 128693384 + 11.1 0.000 promoter-TSS (NM_001271010) promoter-TSS (NM_001271010) -648 NM_001271010 2313 Hs.504281 NM_002017 ENSG00000151702 FLI1 BDPLT21|EWSR2|SIC-1 Fli-1 proto-oncogene, ETS transcription factor protein-coding chr2-902 chr2 29002687 29002919 + 11.1 0.000 intron (NM_001321538, intron 5 of 18) intron (NM_001321538, intron 5 of 18) 21505 NM_001321538 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr6-359 chr6 89145941 89146173 + 11.1 0.000 promoter-TSS (NM_001010853) promoter-TSS (NM_001010853) 2 NM_001010853 135293 Hs.356247 NM_001010853 ENSG00000146281 PM20D2 ACY1L2 peptidase M20 domain containing 2 protein-coding chr5-144 chr5 170480401 170480633 + 11.1 0.000 intron (NM_001034838, intron 1 of 7) AluSz6|SINE|Alu -23503 NM_001034837 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding chr9-549 chr9 130515023 130515255 + 11.1 0.000 Intergenic AluJb|SINE|Alu 64355 NR_027440 100272217 Hs.601255 NR_027440 LOC100272217 - uncharacterized LOC100272217 ncRNA chr3-894 chr3 169938430 169938662 + 11.1 0.000 non-coding (NR_130713, exon 10 of 10) non-coding (NR_130713, exon 10 of 10) 26974 NM_182610 344658 Hs.439922 NM_182610 ENSG00000187033 SAMD7 - sterile alpha motif domain containing 7 protein-coding chr3-344 chr3 12984269 12984501 + 11.1 0.000 intron (NM_001134382, intron 1 of 13) MER91A|DNA|hAT-Tip100 2716 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chrX-148 chrX 130742037 130742269 + 11.1 0.000 intron (NM_182314, intron 3 of 15) L3|LINE|CR1 -60483 NR_135655 105373338 Hs.642023 NR_135655 LOC105373338 - uncharacterized LOC105373338 ncRNA chr7-675 chr7 23272725 23272957 + 11.1 0.000 intron (NM_001005340, intron 9 of 10) intron (NM_001005340, intron 9 of 10) 26066 NM_001005340 10457 Hs.190495 NM_002510 ENSG00000136235 GPNMB HGFIN|NMB|PLCA3 glycoprotein nmb protein-coding chr11-581 chr11 61636412 61636644 + 11.1 0.000 intron (NR_002775, intron 4 of 4) MIRb|SINE|MIR 21492 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr2-586 chr2 26149627 26149859 + 11.1 0.000 Intergenic Intergenic -23345 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr16-442 chr16 58407843 58408075 + 11.1 0.000 Intergenic Intergenic 15488 NM_001126130 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr12-595 chr12 25820393 25820625 + 11.1 0.000 Intergenic Intergenic 53570 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr1-1574 chr1 218674388 218674620 + 11.1 0.000 intron (NR_031644, intron 3 of 6) intron (NR_031644, intron 3 of 6) 164409 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr3-838 chr3 127031919 127032151 + 11.1 0.000 intron (NM_032242, intron 28 of 30) intron (NM_032242, intron 28 of 30) 43441 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr15-395 chr15 55751023 55751255 + 11.1 0.000 Intergenic Intergenic -7987 NM_173814 283659 Hs.130957 NM_173814 ENSG00000166450 PRTG IGDCC5 protogenin protein-coding chr15-371 chr15 41996840 41997072 + 11.1 0.000 intron (NM_001206670, intron 11 of 19) intron (NM_001206670, intron 11 of 19) 24193 NR_120334 101928388 Hs.738043 NR_120334 ENSG00000246740 PLA2G4E-AS1 - PLA2G4E antisense RNA 1 ncRNA chr3-787 chr3 64824684 64824916 + 11.1 0.000 intron (NR_038264, intron 3 of 5) intron (NR_038264, intron 3 of 5) -136800 NM_001318781 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr3-272 chr3 43105917 43106149 + 11.1 0.000 promoter-TSS (NM_032806) promoter-TSS (NM_032806) 46 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr14-481 chr14 104182106 104182338 + 11.1 0.000 Intergenic Intergenic -41362 NR_146613 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr9-259 chr9 124419531 124419763 + 11.1 0.000 Intergenic Intergenic -4205 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr1-540 chr1 32360067 32360299 + 11.1 0.000 Intergenic MIR3|SINE|MIR 2060 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr17-495 chr17 82057019 82057251 + 11.1 0.000 TTS (NM_022156) TTS (NM_022156) 5237 NM_212492 2873 Hs.268530 NM_004127 ENSG00000169727 GPS1 COPS1|CSN1|SGN1 G protein pathway suppressor 1 protein-coding chr12-249 chr12 27247734 27247966 + 11.1 0.000 intron (NM_015000, intron 1 of 13) AluJb|SINE|Alu 3564 NM_015000 23012 Hs.184523 NM_015000 ENSG00000211455 STK38L NDR2 serine/threonine kinase 38 like protein-coding chr3-345 chr3 13559880 13560112 + 11.1 0.000 intron (NM_001004019, intron 1 of 17) intron (NM_001004019, intron 1 of 17) -8744 NM_001165035 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr6-96 chr6 156164005 156164237 + 11.1 0.000 Intergenic AluSz|SINE|Alu -214629 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr11-851 chr11 65134104 65134336 + 11.1 0.000 intron (NM_172230, intron 1 of 15) CpG 299 NM_032431 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr14-423 chr14 71588183 71588415 + 11.1 0.000 exon (NM_001354287, exon 5 of 24) exon (NM_001354287, exon 5 of 24) 2001 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr9-344 chr9 136492200 136492432 + 11.1 0.000 Intergenic AluSx1|SINE|Alu -8557 NM_001276418 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A, endoplasmic reticulum export factor protein-coding chr2-1075 chr2 180250520 180250752 + 11.1 0.000 Intergenic Intergenic -243339 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr12-338 chr12 11486640 11486872 + 11.1 0.000 promoter-TSS (NR_148969) promoter-TSS (NR_148969) -78 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr21-49 chr21 7259205 7259437 + 11.1 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -171316 NM_001322036 102724951 Hs.743984 NM_001322036 LOC102724951 - uncharacterized LOC102724951 protein-coding chr15-229 chr15 92889244 92889476 + 11.1 0.000 intron (NR_037602, intron 3 of 4) AluSx3|SINE|Alu 6064 NR_037602 100507217 Hs.622504 NR_037600 LINC01578 - long intergenic non-protein coding RNA 1578 ncRNA chr5-521 chr5 136513451 136513683 + 11.1 0.000 Intergenic Intergenic -148091 NM_001167577 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding chr4-565 chr4 71608333 71608565 + 11.1 0.000 Intergenic L2c|LINE|L2 175630 NM_000583 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding chr16-352 chr16 3062533 3062765 + 11.1 0.000 Intergenic AluSz|SINE|Alu -2754 NM_001012633 9235 Hs.943 NM_004221 ENSG00000008517 IL32 IL-32alpha|IL-32beta|IL-32delta|IL-32gamma|NK4|TAIF|TAIFa|TAIFb|TAIFc|TAIFd interleukin 32 protein-coding chr6-595 chr6 131951016 131951248 + 11.1 0.000 exon (NM_001901, exon 1 of 5) exon (NM_001901, exon 1 of 5) 240 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr10-834 chr10 132789739 132789971 + 11.1 0.000 Intergenic Intergenic -3708 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr6-386 chr6 138208533 138208765 + 11.1 0.000 intron (NM_020340, intron 3 of 33) L3|LINE|CR1 9841 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr5-503 chr5 73440251 73440483 + 11.1 0.000 Intergenic Intergenic 8410 NM_004472 2297 Hs.519385 NM_004472 ENSG00000251493 FOXD1 FKHL8|FREAC-4|FREAC4 forkhead box D1 protein-coding chr5-282 chr5 104963244 104963476 + 11.1 0.000 Intergenic L1PA16|LINE|L1 -136114 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr7-837 chr7 133241899 133242131 + 11.1 0.000 Intergenic AluSz6|SINE|Alu -11052 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr2-1068 chr2 177675931 177676163 + 11.1 0.000 intron (NM_001077197, intron 17 of 20) intron (NM_001077197, intron 17 of 20) 2725 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA chr4-573 chr4 76885152 76885384 + 11.1 0.000 Intergenic MER74A|LTR|ERVL 12876 NM_001029870 345079 Hs.257292 NM_001029870 ENSG00000186212 SOWAHB ANKRD56 sosondowah ankyrin repeat domain family member B protein-coding chr1-1191 chr1 225479883 225480115 + 11.1 0.000 Intergenic AluSp|SINE|Alu -51144 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr8-522 chr8 87175731 87175963 + 11.1 0.000 intron (NM_173538, intron 4 of 10) L1MA2|LINE|L1 309432 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr13-239 chr13 100726396 100726628 + 11.1 0.000 intron (NR_047687, intron 1 of 7) AluSx1|SINE|Alu 18187 NR_047687 100885778 Hs.602949 NR_047687 ENSG00000233009 NALCN-AS1 - NALCN antisense RNA 1 ncRNA chr13-339 chr13 105533677 105533909 + 11.1 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -28112 NR_040247 282706 Hs.558713 NR_040247 ENSG00000232307 DAOA-AS1 DAOA-AS|DAOAAS|G30 DAOA antisense RNA 1 ncRNA chr9-434 chr9 91950283 91950515 + 11.1 0.000 promoter-TSS (NM_004560) promoter-TSS (NM_004560) -171 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr12-224 chr12 92973028 92973260 + 11.1 0.000 Intergenic Intergenic -43849 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr9-270 chr9 673094 673326 + 11.1 0.000 intron (NM_001256877, intron 2 of 12) AluSz6|SINE|Alu -13557 NM_001354336 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr2-943 chr2 47361379 47361611 + 11.1 0.000 Intergenic L2|LINE|L2 -7653 NM_002354 4072 Hs.542050 NM_002354 ENSG00000119888 EPCAM DIAR5|EGP-2|EGP314|EGP40|ESA|HNPCC8|KS1/4|KSA|M4S1|MIC18|MK-1|TACSTD1|TROP1 epithelial cell adhesion molecule protein-coding chr19-768 chr19 5802770 5803002 + 11.1 0.000 Intergenic Intergenic -11723 NM_001161619 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr1-1048 chr1 234957773 234958005 + 11.1 0.000 non-coding (NR_125945, exon 3 of 4) non-coding (NR_125945, exon 3 of 4) 6110 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr20-371 chr20 46058197 46058429 + 11.1 0.000 3' UTR (NM_001134771, exon 26 of 26) 3' UTR (NM_001134771, exon 26 of 26) 29098 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr6-366 chr6 103950695 103950927 + 11.1 0.000 Intergenic L1PA16|LINE|L1 908735 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr13-271 chr13 40449102 40449334 + 10.9 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 31788 NR_024506 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr11-923 chr11 83194979 83195211 + 10.9 0.000 intron (NM_001300975, intron 1 of 10) intron (NM_001300975, intron 1 of 10) 1383 NR_125355 338699 Hs.503438 NM_182603 ENSG00000137494 ANKRD42 PPP1R79|SARP ankyrin repeat domain 42 protein-coding chr9-253 chr9 69672291 69672523 + 10.9 0.000 promoter-TSS (NM_001163).2 promoter-TSS (NM_001163).2 -36 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding KI270512.1-1 KI270512.1 21256 21488 + 10.9 0.000 NA NA NA NA chr12-221 chr12 56309416 56309648 + 10.9 0.000 TTS (NM_014255) TTS (NM_014255) 6456 NM_014255 10330 Hs.8752 NM_014255 ENSG00000257727 CNPY2 HP10390|MSAP|TMEM4|ZSIG9 canopy FGF signaling regulator 2 protein-coding chr7-442 chr7 131803484 131803716 + 10.9 0.000 Intergenic Intergenic -106620 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr9-520 chr9 83261206 83261438 + 10.9 0.000 intron (NM_001244960, intron 13 of 13) intron (NM_001244960, intron 13 of 13) 5946 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr11-951 chr11 112309414 112309646 + 10.9 0.000 intron (NR_126004, intron 2 of 3) MLT1I|LTR|ERVL-MaLR 38781 NR_126004 283140 Hs.651827 NR_126004 ENSG00000250303 LINC02762 - long intergenic non-protein coding RNA 2762 ncRNA chr8-130 chr8 478748 478980 + 10.9 0.000 TTS (NM_183420) TTS (NM_183420) 36888 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr13-190 chr13 95576129 95576361 + 10.9 0.000 intron (NM_001160100, intron 3 of 4) intron (NM_001160100, intron 3 of 4) 23525 NM_006984 9071 Hs.534377 NM_006984 ENSG00000134873 CLDN10 CPETRL3|HELIX|OSP-L|OSPL claudin 10 protein-coding chr17-546 chr17 32133365 32133597 + 10.9 0.000 Intergenic Intergenic -8973 NM_001033567 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr21-109 chr21 33266110 33266342 + 10.9 0.000 promoter-TSS (NM_000628) promoter-TSS (NM_000628) 34 NR_038974 100288432 Hs.709795 NR_038974 IL10RB-DT IFNAR2-AS1|IL10RB-AS1 IL10RB divergent transcript ncRNA chr8-417 chr8 130682710 130682942 + 10.9 0.000 Intergenic Intergenic -239152 NM_001362925 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr17-550 chr17 41769674 41769906 + 10.9 0.000 intron (NM_001352776, intron 3 of 15) intron (NM_001352776, intron 3 of 15) 16305 NM_001352777 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr1-1459 chr1 155086305 155086537 + 10.9 0.000 exon (NM_004952, exon 5 of 5) exon (NM_004952, exon 5 of 5) 7584 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr22-446 chr22 50487587 50487819 + 10.9 0.000 exon (NM_017584, exon 3 of 10) exon (NM_017584, exon 3 of 10) 844 NM_017584 55586 Hs.129227 NM_017584 ENSG00000100253 MIOX ALDRL6 myo-inositol oxygenase protein-coding chr1-1315 chr1 31576352 31576584 + 10.9 0.000 promoter-TSS (NM_022164) promoter-TSS (NM_022164) -17 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr5-512 chr5 109267406 109267638 + 10.9 0.000 intron (NR_149040, intron 3 of 3) L1MA8|LINE|L1 58847 NR_149040 285638 Hs.532104 NR_149040 ENSG00000249476 LOC285638 - uncharacterized LOC285638 ncRNA chr16-577 chr16 5989762 5989994 + 10.9 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -29146 NM_001364800 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr19-839 chr19 43546353 43546585 + 10.9 0.000 intron (NM_006297, intron 12 of 16) MSR1|Satellite|Satellite 13281 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr20-325 chr20 20686821 20687053 + 10.9 0.000 intron (NM_020343, intron 1 of 39) intron (NM_020343, intron 1 of 39) 25707 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr7-773 chr7 91707621 91707853 + 10.9 0.000 Intergenic L1MA4A|LINE|L1 172965 NM_006980 7978 Hs.532216 NM_006980 ENSG00000127989 MTERF1 MTERF mitochondrial transcription termination factor 1 protein-coding KI270730.1-4 KI270730.1 85008 85240 + 10.9 0.000 NA NA NA NA chr5-689 chr5 135448564 135448796 + 10.9 0.000 3' UTR (NM_001099221, exon 2 of 2) 3' UTR (NM_001099221, exon 2 of 2) -1332 NM_130848 140947 Hs.152477 NM_130848 ENSG00000251380 DCANP1 C5orf20|DCNP1 dendritic cell associated nuclear protein protein-coding chr1-859 chr1 19690853 19691085 + 10.9 0.000 intron (NM_001349112, intron 14 of 14) AluY|SINE|Alu 26094 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr19-747 chr19 1829030 1829262 + 10.9 0.000 intron (NM_020695, intron 1 of 15) intron (NM_020695, intron 1 of 15) 7057 NR_152847 100288123 Hs.662426 NR_034114 ENSG00000267244 LOC100288123 - uncharacterized LOC100288123 ncRNA chr7-636 chr7 1183108 1183340 + 10.9 0.000 Intergenic Intergenic 22439 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr16-387 chr16 262671 262903 + 10.9 0.000 intron (NM_032039, intron 8 of 12) intron (NM_032039, intron 8 of 12) 13157 NM_003834 8786 Hs.65756 NM_003834 ENSG00000076344 RGS11 RS11 regulator of G protein signaling 11 protein-coding chr3-773 chr3 57756503 57756735 + 10.9 0.000 promoter-TSS (NM_001304421) promoter-TSS (NM_001304421) -637 NM_007159 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr1-1209 chr1 1312433 1312665 + 10.9 0.000 promoter-TSS (NR_106785) promoter-TSS (NR_106785) 17 NR_106785 102465435 NR_106785 ENSG00000283712 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA chr19-327 chr19 13329340 13329572 + 10.9 0.000 intron (NM_023035, intron 10 of 46) L2b|LINE|L2 177004 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr14-411 chr14 65979302 65979534 + 10.9 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -506953 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr15-163 chr15 40333571 40333803 + 10.9 0.000 3' UTR (NM_207380, exon 11 of 11) 3' UTR (NM_207380, exon 11 of 11) 7280 NM_207380 388115 Hs.32433 NM_207380 ENSG00000188549 CCDC9B C15orf52 coiled-coil domain containing 9B protein-coding chrX-215 chrX 35466665 35466897 + 10.9 0.000 Intergenic AluYj4|SINE|Alu -331561 NM_001370158 139604 NM_001099921 ENSG00000189023 MAGEB16 - MAGE family member B16 protein-coding chr18-156 chr18 36593013 36593245 + 10.9 0.000 intron (NM_001281740, intron 6 of 28) L2a|LINE|L2 70289 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr9-703 chr9 129563124 129563356 + 10.9 0.000 Intergenic AluSc8|SINE|Alu -45644 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr12-417 chr12 48925995 48926227 + 10.9 0.000 promoter-TSS (NM_001143782) promoter-TSS (NM_001143782) -564 NM_001143782 51303 Hs.655103 NM_016594 ENSG00000134285 FKBP11 FKBP19 FKBP prolyl isomerase 11 protein-coding chr12-724 chr12 117098840 117099072 + 10.9 0.000 promoter-TSS (NR_120464) promoter-TSS (NR_120464) 460 NM_017899 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr7-420 chr7 36315121 36315353 + 10.9 0.000 Intergenic Intergenic 52003 NM_001199708 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr10-391 chr10 95571352 95571584 + 10.9 0.000 Intergenic AluJr|SINE|Alu -10097 NM_024991 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr7-765 chr7 79824235 79824467 + 10.9 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -310480 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr5-460 chr5 153681944 153682176 + 10.9 0.000 intron (NM_000827, intron 7 of 15) MIRc|SINE|MIR 189888 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding chr11-533 chr11 122656774 122657006 + 10.9 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 1168 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr5-168 chr5 130000627 130000859 + 10.9 0.000 intron (NM_175856, intron 2 of 2) (T)n|Simple_repeat|Simple_repeat 96278 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr7-553 chr7 137975873 137976105 + 10.9 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 22641 NR_161346 100130880 Hs.712161 NR_161346 CREB3L2-AS1 - CREB3L2 antisense RNA 1 ncRNA chr1-192 chr1 143264548 143264780 + 10.9 0.000 Intergenic Intergenic 157928 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr20-198 chr20 24670630 24670862 + 10.9 0.000 Intergenic Intergenic 200785 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr3-519 chr3 73521095 73521327 + 10.9 0.000 promoter-TSS (NR_121660) promoter-TSS (NR_121660) -111 NR_121660 101927296 Hs.662049 NR_121660 LOC101927296 - uncharacterized LOC101927296 ncRNA chr16-680 chr16 82396989 82397221 + 10.9 0.000 Intergenic LTR16|LTR|ERVL -226881 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr8-472 chr8 32014803 32015035 + 10.9 0.000 intron (NM_013962, intron 1 of 4) MLT1C|LTR|ERVL-MaLR -10817 NR_104158 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr9-616 chr9 83707998 83708230 + 10.9 0.000 promoter-TSS (NM_053067) promoter-TSS (NM_053067) -156 NM_053067 29979 Hs.9589 NM_013438 ENSG00000135018 UBQLN1 DA41|DSK2|PLIC-1|UBQN|XDRP1 ubiquilin 1 protein-coding chr22-271 chr22 24495360 24495592 + 10.9 0.000 promoter-TSS (NR_028484) promoter-TSS (NR_028484) 144 NM_016327 51733 Hs.731656 NM_016327 ENSG00000100024 UPB1 BUP1 beta-ureidopropionase 1 protein-coding chr17-718 chr17 4912283 4912515 + 10.7 0.000 Intergenic AluSx|SINE|Alu -9301 NM_000080 1145 Hs.654535 NM_000080 ENSG00000108556 CHRNE ACHRE|CMS1D|CMS1E|CMS2A|CMS4A|CMS4B|CMS4C|FCCMS|SCCMS cholinergic receptor nicotinic epsilon subunit protein-coding chr10-832 chr10 132778089 132778321 + 10.7 0.000 intron (NM_005539, intron 13 of 15) intron (NM_005539, intron 13 of 15) 7942 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr7-759 chr7 77377238 77377470 + 10.7 0.000 exon (NM_001350899, exon 9 of 30) exon (NM_001350899, exon 9 of 30) -37844 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA chr10-212 chr10 126934621 126934853 + 10.7 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 29328 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr3-615 chr3 27902325 27902557 + 10.7 0.000 Intergenic Intergenic -68305 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA chr17-580 chr17 68291016 68291248 + 10.7 0.000 promoter-TSS (NM_001352909) promoter-TSS (NM_001352909) -5 NM_004694 9120 Hs.42645 NM_004694 ENSG00000108932 SLC16A6 MCT6|MCT7 solute carrier family 16 member 6 protein-coding chr19-440 chr19 33661792 33662024 + 10.7 0.000 intron (NM_001127896, intron 1 of 3) AluJr|SINE|Alu -22620 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr4-632 chr4 139254578 139254810 + 10.7 0.000 Intergenic Intergenic 25531 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr1-1444 chr1 151225940 151226172 + 10.7 0.000 intron (NM_001135638, intron 3 of 15) AluSz6|SINE|Alu 27504 NM_001135636 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding chrX-82 chrX 112919809 112920041 + 10.7 0.000 Intergenic L1M5|LINE|L1 -79094 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr13-221 chr13 41831560 41831792 + 10.7 0.000 intron (NM_001009814, intron 13 of 25) AluSx|SINE|Alu 129409 NM_001009814 23078 Hs.368282 NM_015058 ENSG00000102763 VWA8 KIAA0564|P7BP2 von Willebrand factor A domain containing 8 protein-coding chr2-933 chr2 44351033 44351265 + 10.7 0.000 intron (NM_001171617, intron 1 of 13) AluSq10|SINE|Alu 8600 NM_001042385 9581 Hs.444349 NM_006036 ENSG00000138078 PREPL CMS22 prolyl endopeptidase like protein-coding chr11-733 chr11 118488368 118488600 + 10.7 0.000 intron (NM_005933, intron 10 of 35) intron (NM_005933, intron 10 of 35) -38949 NM_001346096 143941 Hs.653449 NM_001080441 ENSG00000172425 TTC36 HBP21 tetratricopeptide repeat domain 36 protein-coding chr1-764 chr1 74567037 74567269 + 10.7 0.000 TTS (NM_001002912) TTS (NM_001002912) -10277 NR_121671 101927320 Hs.662589 NR_121670 ENSG00000234497 ERICH3-AS1 - ERICH3 antisense RNA 1 ncRNA chr10-752 chr10 97632586 97632818 + 10.7 0.000 intron (NM_001098831, intron 1 of 4) intron (NM_001098831, intron 1 of 4) 798 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr7-728 chr7 55075022 55075254 + 10.7 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -34701 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr4-535 chr4 32415462 32415694 + 10.7 0.000 Intergenic AluSq2|SINE|Alu 64540 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chrX-214 chrX 34734498 34734730 + 10.7 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -77329 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr9-641 chr9 98708478 98708710 + 10.7 0.000 exon (NM_005458, exon 1 of 19) exon (NM_005458, exon 1 of 19) 341 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr18-212 chr18 37424229 37424461 + 10.7 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 42159 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr1-848 chr1 16728084 16728316 + 10.7 0.000 Intergenic AluSz|SINE|Alu -8043 NR_026567 284729 Hs.548239 NR_026567 ENSG00000268869 ESPNP dJ1182A14.1 espin pseudogene pseudo chr11-617 chr11 71984711 71984943 + 10.7 0.000 intron (NM_018320, intron 4 of 8) AluSz|SINE|Alu -14082 NM_001039660 10068 Hs.591967 NM_005699 ENSG00000137496 IL18BP IL18BPa interleukin 18 binding protein protein-coding chr1-1359 chr1 53100674 53100906 + 10.7 0.000 intron (NR_109858, intron 5 of 10) intron (NR_109858, intron 5 of 10) 38577 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr12-499 chr12 16273712 16273944 + 10.7 0.000 intron (NM_001170798, intron 1 of 8) L1ME4a|LINE|L1 3857 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding chr9-718 chr9 133845758 133845990 + 10.7 0.000 intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -105919 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr4-597 chr4 105180549 105180781 + 10.7 0.000 intron (NR_126420, intron 2 of 5) AluSx|SINE|Alu 33980 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr2-386 chr2 47851884 47852116 + 10.7 0.000 intron (NM_001190274, intron 1 of 22) AluSx1|SINE|Alu 36719 NM_025133 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr2-831 chr2 187117556 187117788 + 10.7 0.000 Intergenic Intergenic -268502 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr9-722 chr9 134213973 134214205 + 10.7 0.000 Intergenic Intergenic -49525 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr5-658 chr5 112987414 112987646 + 10.7 0.000 intron (NM_152624, intron 2 of 10) AluSz6|SINE|Alu 10732 NM_001242377 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr1-1472 chr1 157245304 157245536 + 10.7 0.000 Intergenic Intergenic -106829 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr8-594 chr8 141762913 141763145 + 10.7 0.000 Intergenic Intergenic 23284 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr11-277 chr11 47931780 47932012 + 10.7 0.000 Intergenic Intergenic -48663 NM_001098503 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding chr1-756 chr1 52114754 52114986 + 10.7 0.000 Intergenic MIR|SINE|MIR -27219 NM_007324 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr7-664 chr7 6317927 6318159 + 10.7 0.000 Intergenic Intergenic 30924 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding chr7-686 chr7 30135899 30136131 + 10.7 0.000 intron (NM_152793, intron 1 of 2) (CA)n|Simple_repeat|Simple_repeat 1029 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr6-584 chr6 118031537 118031769 + 10.7 0.000 intron (NM_001029858, intron 1 of 7) MER66B|LTR|ERV1 -54250 NR_134601 105377967 Hs.692865 NR_134601 LOC105377967 - uncharacterized LOC105377967 ncRNA chr6-383 chr6 133039624 133039856 + 10.7 0.000 Intergenic AluSz|SINE|Alu -48340 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr16-711 chr16 88245821 88246053 + 10.7 0.000 Intergenic Intergenic 51656 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr20-319 chr20 17610510 17610742 + 10.7 0.000 TTS (NM_006870) TTS (NM_006870) 40551 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr4-275 chr4 174502493 174502725 + 10.7 0.000 intron (NM_001256306, intron 2 of 4) AluY|SINE|Alu 19879 NM_000860 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr6-460 chr6 130098741 130098973 + 10.7 0.000 intron (NM_001007102, intron 17 of 21) intron (NM_001007102, intron 17 of 21) 79213 NM_001346550 84456 Hs.658051 NM_032438 ENSG00000198945 L3MBTL3 MBT-1|MBT1 L3MBTL histone methyl-lysine binding protein 3 protein-coding chr3-189 chr3 141635479 141635711 + 10.7 0.000 Intergenic L1ME3E|LINE|L1 -27604 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr20-271 chr20 36569930 36570162 + 10.7 0.000 intron (NR_109939, intron 2 of 4) intron (NR_109939, intron 2 of 4) 3229 NR_109939 101926987 Hs.647444 NR_109939 ENSG00000232907 DLGAP4-AS1 CCAT7 DLGAP4 antisense RNA 1 ncRNA chr16-464 chr16 77006883 77007115 + 10.7 0.000 Intergenic AluSg7|SINE|Alu 138063 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA chr1-1188 chr1 219533445 219533677 + 10.7 0.000 intron (NR_135822, intron 1 of 3) intron (NR_135822, intron 1 of 3) 23763 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr12-761 chr12 132588322 132588554 + 10.7 0.000 Intergenic Intergenic 6441 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr7-493 chr7 57822968 57823200 + 10.7 0.000 Intergenic Intergenic 372907 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr1-1111 chr1 51196571 51196803 + 10.7 0.000 non-coding (NR_147076, exon 2 of 2) non-coding (NR_147076, exon 2 of 2) 38409 NR_147076 105378716 NR_147076 ENSG00000203356 LINC01562 - long intergenic non-protein coding RNA 1562 ncRNA chr14-229 chr14 76479569 76479801 + 10.7 0.000 intron (NM_004452, intron 5 of 10) intron (NM_004452, intron 5 of 10) 108338 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr5-508 chr5 88254710 88254942 + 10.7 0.000 intron (NM_001349407, intron 1 of 14) AluJr|SINE|Alu 14019 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr17-459 chr17 3202329 3202561 + 10.7 0.000 Intergenic AluJr4|SINE|Alu 4928 NM_012352 26189 Hs.532660 NM_012352 ENSG00000172150 OR1A2 OR17-6 olfactory receptor family 1 subfamily A member 2 protein-coding chr8-549 chr8 111297147 111297379 + 10.7 0.000 Intergenic Tigger2|DNA|TcMar-Tigger -61060 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA chr5-640 chr5 87481893 87482125 + 10.7 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -68976 NM_001363539 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr10-674 chr10 63265068 63265300 + 10.7 0.000 intron (NM_001322258, intron 2 of 24) intron (NM_001322258, intron 2 of 24) 4039 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr12-589 chr12 20368755 20368987 + 10.7 0.000 promoter-TSS (NM_000921) promoter-TSS (NM_000921) -374 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr1-1017 chr1 203480419 203480651 + 10.7 0.000 intron (NM_002725, intron 1 of 2) intron (NM_002725, intron 1 of 2) 4729 NM_201348 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr1-832 chr1 6304243 6304475 + 10.7 0.000 intron (NM_181866, intron 6 of 8) intron (NM_181866, intron 6 of 8) -43261 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr22-325 chr22 20117875 20118107 + 10.7 0.000 promoter-TSS (NM_182984) promoter-TSS (NM_182984) 246 NM_001278641 5902 Hs.24763 NM_002882 ENSG00000099901 RANBP1 HTF9A RAN binding protein 1 protein-coding chr1-523 chr1 236429095 236429327 + 10.5 0.000 intron (NM_080738, intron 4 of 5) SVA_B|Retroposon|SVA 33798 NM_080738 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr19-801 chr19 16734001 16734233 + 10.5 0.000 intron (NM_001007525, intron 3 of 18) intron (NM_001007525, intron 3 of 18) 2925 NM_001347994 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr5-484 chr5 256851 257083 + 10.5 0.000 3' UTR (NM_004168, exon 15 of 15) 3' UTR (NM_004168, exon 15 of 15) 14557 NR_104613 102467073 Hs.368328 NR_104613 HRAT5 - heart tissue-associated transcript 5 ncRNA chr22-438 chr22 47016187 47016419 + 10.5 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -100261 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr6-411 chr6 165862607 165862839 + 10.5 0.000 Intergenic AluSz|SINE|Alu -124828 NR_027284 441177 Hs.708964 NM_001013720 ENSG00000281832 LINC00602 - long intergenic non-protein coding RNA 602 ncRNA chr1-820 chr1 1518071 1518303 + 10.5 0.000 intron (NM_001170536, intron 4 of 15) (AC)n|Simple_repeat|Simple_repeat 5657 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chrX-291 chrX 148345093 148345325 + 10.5 0.000 Intergenic L1P3|LINE|L1 -155408 NM_001169125 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr3-656 chr3 114447871 114448103 + 10.5 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -5606 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr13-208 chr13 19924687 19924919 + 10.5 0.000 Intergenic L1MB2|LINE|L1 -32603 NM_001353159 7750 Hs.507433 NM_003453 ENSG00000121741 ZMYM2 FIM|MYM|RAMP|SCLL|ZNF198 zinc finger MYM-type containing 2 protein-coding chr8-447 chr8 22635339 22635571 + 10.5 0.000 intron (NM_001363046, intron 3 of 7) intron (NM_001363046, intron 3 of 7) 6754 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr5-741 chr5 177116877 177117109 + 10.5 0.000 Intergenic CpG -16086 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr1-984 chr1 156076770 156077002 + 10.5 0.000 exon (NM_001093725, exon 2 of 2) exon (NM_001093725, exon 2 of 2) 5579 NM_001093725 92312 Hs.591496 NM_001093725 ENSG00000254726 MEX3A MEX-3A|RKHD4|RNF162 mex-3 RNA binding family member A protein-coding chr10-711 chr10 78846265 78846497 + 10.5 0.000 Intergenic MIRb|SINE|MIR 221067 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr12-508 chr12 49330811 49331043 + 10.5 0.000 exon (NM_005480, exon 13 of 15) exon (NM_005480, exon 13 of 15) 6261 NM_001008223 338761 Hs.380386 NM_001008223 ENSG00000186897 C1QL4 C1QTNF11|CTRP11 complement C1q like 4 protein-coding chr2-588 chr2 26798125 26798357 + 10.5 0.000 Intergenic MER21A|LTR|ERVL 12185 NM_001809 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding chr4-541 chr4 40220186 40220418 + 10.5 0.000 intron (NM_001278360, intron 2 of 3) intron (NM_001278360, intron 2 of 3) 23271 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chrX-190 chrX 132791699 132791931 + 10.5 0.000 intron (NM_001077188, intron 3 of 5) AluJr|SINE|Alu 124173 NR_046691 100874102 Hs.619341 NR_046691 ENSG00000235849 HS6ST2-AS1 - HS6ST2 antisense RNA 1 ncRNA chrX-294 chrX 153222373 153222605 + 10.5 0.000 Intergenic Intergenic 43205 NM_004988 4100 Hs.72879 NM_004988 ENSG00000198681 MAGEA1 CT1.1|MAGE1 MAGE family member A1 protein-coding chr1-436 chr1 239994858 239995090 + 10.5 0.000 Intergenic Intergenic -12550 NR_036695 645884 Hs.613280 NR_036695 RPS7P5 RPS7_2_183 ribosomal protein S7 pseudogene 5 pseudo chr5-557 chr5 867382 867614 + 10.5 0.000 intron (NM_001009877, intron 14 of 15) MSTA-int|LTR|ERVL-MaLR -16512 NM_024786 79844 Hs.654874 NM_024786 ENSG00000188818 ZDHHC11 ZNF399 zinc finger DHHC-type containing 11 protein-coding chr1-757 chr1 52272603 52272835 + 10.5 0.000 intron (NM_007324, intron 6 of 17) AluSx1|SINE|Alu 93486 NM_032449 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr9-621 chr9 90966531 90966763 + 10.5 0.000 Intergenic Intergenic 108485 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr1-588 chr1 3470358 3470590 + 10.5 0.000 intron (NM_014448, intron 6 of 14) intron (NM_014448, intron 6 of 14) 15809 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chrX-134 chrX 86187253 86187485 + 10.5 0.000 intron (NM_001139514, intron 1 of 11) intron (NM_001139514, intron 1 of 11) 38918 NM_053281 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding chr3-747 chr3 42443988 42444220 + 10.5 0.000 Intergenic Intergenic -33494 NM_144634 131375 Hs.234895 NM_144634 ENSG00000157093 LYZL4 LYC4|LYZA lysozyme like 4 protein-coding chr11-759 chr11 1337268 1337500 + 10.5 0.000 Intergenic CpG 27676 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chrX-149 chrX 133549590 133549822 + 10.5 0.000 intron (NM_001164619, intron 6 of 6) (TCCC)n|Simple_repeat|Simple_repeat -134217 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr14-465 chr14 101174082 101174314 + 10.5 0.000 Intergenic Intergenic 53342 NR_146490 101929422 NR_146490 ENSG00000259004 LINC02285 - long intergenic non-protein coding RNA 2285 ncRNA chr13-348 chr13 112892073 112892305 + 10.5 0.000 Intergenic Intergenic 76449 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr6-183 chr6 27732262 27732494 + 10.5 0.000 Intergenic L1MD2|LINE|L1 -29366 NR_038929 100131289 Hs.200573 NR_038929 LOC100131289 - uncharacterized LOC100131289 ncRNA chr9-648 chr9 106929021 106929253 + 10.5 0.000 exon (NM_021224, exon 3 of 13) exon (NM_021224, exon 3 of 13) 65971 NM_001347997 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr1-1221 chr1 5915628 5915860 + 10.5 0.000 intron (NR_111987, intron 11 of 32) intron (NR_111987, intron 11 of 32) -53003 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA chr17-543 chr17 29926368 29926600 + 10.5 0.000 intron (NM_001282129, intron 1 of 15) AluJb|SINE|Alu -3419 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding chr2-399 chr2 171541693 171541925 + 10.5 0.000 intron (NM_001256909, intron 2 of 3) intron (NM_001256909, intron 2 of 3) 19335 NM_024843 79901 Hs.221941 NM_024843 ENSG00000071967 CYBRD1 CYB561A2|DCYTB|FRRS3 cytochrome b reductase 1 protein-coding chr19-800 chr19 16574871 16575103 + 10.5 0.000 TTS (NM_004831) TTS (NM_004831) -2572 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr5-711 chr5 149699344 149699576 + 10.5 0.000 Intergenic AluJr|SINE|Alu -30850 NM_133263 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding KI270736.1-4 KI270736.1 157245 157477 + 10.5 0.000 NA NA NA NA chr19-734 chr19 288033 288265 + 10.5 0.000 exon (NM_177543, exon 2 of 6) exon (NM_177543, exon 2 of 6) 2990 NM_177543 8612 Hs.465506 NM_003712 ENSG00000141934 PLPP2 LPP2|PAP-2c|PAP2-g|PPAP2C phospholipid phosphatase 2 protein-coding chr9-341 chr9 135788379 135788611 + 10.5 0.000 intron (NM_001272003, intron 29 of 30) intron (NM_001272003, intron 29 of 30) 86310 NM_020822 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-823 chr2 172449794 172450026 + 10.5 0.000 intron (NM_001365530, intron 1 of 25) AluSp|SINE|Alu 16112 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr2-1146 chr2 235940400 235940632 + 10.5 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 227870 NM_001485 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr10-644 chr10 34793376 34793608 + 10.5 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 21804 NM_001184794 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr2-568 chr2 236526048 236526280 + 10.5 0.000 Intergenic AluYa5|SINE|Alu -18629 NM_001270584 79781 Hs.591594 NM_024726 ENSG00000132321 IQCA1 4930465P12Rik|DRC11|IQCA IQ motif containing with AAA domain 1 protein-coding chr21-99 chr21 42852822 42853054 + 10.5 0.000 intron (NM_001260476, intron 9 of 10) intron (NM_001260476, intron 9 of 10) 26337 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr17-804 chr17 50707725 50707957 + 10.5 0.000 promoter-TSS (NM_052855) promoter-TSS (NM_052855) 73 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr4-559 chr4 67871350 67871582 + 10.5 0.000 intron (NM_004262, intron 1 of 9) MamGypsy2-I|LTR|Gypsy 12536 NM_004262 9407 Hs.132195 NM_004262 ENSG00000153802 TMPRSS11D HAT transmembrane serine protease 11D protein-coding chr20-274 chr20 37396256 37396488 + 10.5 0.000 intron (NM_198291, intron 8 of 13) intron (NM_198291, intron 8 of 13) 50244 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr1-1105 chr1 43394072 43394304 + 10.5 0.000 intron (NM_015284, intron 1 of 70) MER5A1|DNA|hAT-Charlie 4289 NM_015284 23334 Hs.643560 NM_015284 ENSG00000198198 SZT2 C1orf84|EIEE18|KIAA0467|SZT2A|SZT2B SZT2 subunit of KICSTOR complex protein-coding chr17-267 chr17 16132691 16132923 + 10.5 0.000 intron (NM_001190440, intron 13 of 44) (T)n|Simple_repeat|Simple_repeat 20389 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr8-313 chr8 58858338 58858570 + 10.5 0.000 intron (NM_014729, intron 3 of 8) intron (NM_014729, intron 3 of 8) -198601 NM_003580 8439 Hs.372000 NM_003580 ENSG00000035681 NSMAF FAN|GRAMD5 neutral sphingomyelinase activation associated factor protein-coding chr16-616 chr16 52592693 52592925 + 10.5 0.000 intron (NR_033920, intron 1 of 3) intron (NR_033920, intron 1 of 3) 14166 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr16-224 chr16 4943429 4943661 + 10.5 0.000 Intergenic Intergenic -6397 NM_002705 5493 Hs.192233 NM_002705 ENSG00000118898 PPL - periplakin protein-coding chr2-796 chr2 99168865 99169097 + 10.5 0.000 TTS (NM_138798) TTS (NM_138798) 12077 NM_001320417 129531 Hs.14222 NM_138798 ENSG00000158411 MITD1 - microtubule interacting and trafficking domain containing 1 protein-coding chr10-295 chr10 125000517 125000749 + 10.5 0.000 intron (NM_001290214, intron 5 of 10) intron (NM_001290214, intron 5 of 10) 5385 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr15-459 chr15 88622351 88622583 + 10.5 0.000 intron (NM_022767, intron 1 of 3) LTR2B|LTR|ERV1 1127 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr21-92 chr21 34834226 34834458 + 10.5 0.000 intron (NM_001122607, intron 4 of 4) intron (NM_001122607, intron 4 of 4) 54357 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr9-275 chr9 16634417 16634649 + 10.3 0.000 intron (NM_001317940, intron 2 of 5) AluY|SINE|Alu -92281 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr13-60 chr13 54698721 54698953 + 10.3 0.000 Intergenic AluY|SINE|Alu -386789 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA chr8-516 chr8 82204923 82205155 + 10.3 0.000 Intergenic Intergenic -362753 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding chr10-308 chr10 19145505 19145737 + 10.3 0.000 intron (NM_001142308, intron 10 of 39) AluSz|SINE|Alu 96820 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding chr2-653 chr2 109530655 109530887 + 10.3 0.000 Intergenic Intergenic 82896 NM_001321514 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chrX-34 chrX 45667902 45668134 + 10.3 0.000 Intergenic Intergenic -63070 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr6-508 chr6 18308158 18308390 + 10.3 0.000 Intergenic Intergenic -43744 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr19-837 chr19 41720353 41720585 + 10.3 0.000 intron (NM_001308398, intron 7 of 8) intron (NM_001308398, intron 7 of 8) 11843 NM_004363 1048 Hs.709196 NM_004363 ENSG00000105388 CEACAM5 CD66e|CEA carcinoembryonic antigen related cell adhesion molecule 5 protein-coding chr1-1300 chr1 27575185 27575417 + 10.3 0.000 intron (NM_001029882, intron 1 of 6) CpG 28193 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr6-333 chr6 35525409 35525641 + 10.3 0.000 Intergenic AluJo|SINE|Alu -12629 NM_001289395 7287 Hs.485208 NM_003322 ENSG00000112041 TULP1 LCA15|RP14|TUBL1 TUB like protein 1 protein-coding chr2-392 chr2 101151456 101151688 + 10.3 0.000 promoter-TSS (NM_001330348) promoter-TSS (NM_001330348) -88 NR_135594 100506286 Hs.679790 NR_135594 ENSG00000272902 TBC1D8-AS1 - TBC1 domain family member 8 antisense RNA 1 ncRNA chr11-677 chr11 14325048 14325280 + 10.3 0.000 intron (NM_001177314, intron 1 of 5) MIR|SINE|MIR 33321 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr16-367 chr16 62196142 62196374 + 10.3 0.000 Intergenic Intergenic -159820 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr3-678 chr3 185050018 185050250 + 10.3 0.000 intron (NM_001009921, intron 46 of 46) (T)n|Simple_repeat|Simple_repeat 102926 NM_001025266 285382 Hs.245793 NM_001025266 ENSG00000187068 C3orf70 - chromosome 3 open reading frame 70 protein-coding chr1-774 chr1 99509360 99509592 + 10.3 0.000 Intergenic Intergenic -21672 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr14-365 chr14 99000910 99001142 + 10.3 0.000 Intergenic Intergenic 271171 NM_001282237 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr2-611 chr2 45933291 45933523 + 10.3 0.000 intron (NM_005400, intron 2 of 14) L1ME3A|LINE|L1 281732 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr1-1422 chr1 111028755 111028987 + 10.3 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -64927 NM_001006945 55791 Hs.25245 NM_018372 ENSG00000121931 LRIF1 C1orf103|HBiX1|RIF1 ligand dependent nuclear receptor interacting factor 1 protein-coding chr1-1406 chr1 92584052 92584284 + 10.3 0.000 intron (NM_001350198, intron 18 of 19) intron (NM_001350198, intron 18 of 19) -97243 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr2-332 chr2 88835977 88836209 + 10.3 0.000 Intergenic Intergenic 23723 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr16-428 chr16 30821028 30821260 + 10.3 0.000 Intergenic CpG -33939 NM_001080417 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr3-858 chr3 143972674 143972906 + 10.3 0.000 promoter-TSS (NM_001134470) promoter-TSS (NM_001134470) -291 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr9-646 chr9 101670479 101670711 + 10.3 0.000 exon (NM_133445, exon 3 of 9) exon (NM_133445, exon 3 of 9) 67985 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding chrX-178 chrX 49924107 49924339 + 10.3 0.000 intron (NM_001127899, intron 2 of 14) AluSx|SINE|Alu 1627 NM_001127899 1184 Hs.166486 NM_000084 ENSG00000171365 CLCN5 CLC5|CLCK2|ClC-5|DENTS|NPHL1|NPHL2|XLRH|XRN|hCIC-K2 chloride voltage-gated channel 5 protein-coding chr5-242 chr5 66478237 66478469 + 10.3 0.000 Intergenic MER4E1|LTR|ERV1 33251 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA chr9-523 chr9 90254578 90254810 + 10.3 0.000 Intergenic Intergenic 178795 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr2-1027 chr2 127687290 127687522 + 10.3 0.000 Intergenic AluJr|SINE|Alu -5620 NM_001161404 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr7-496 chr7 71445115 71445347 + 10.3 0.000 intron (NM_022479, intron 5 of 10) AluSx1|SINE|Alu -137461 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr2-548 chr2 160409130 160409362 + 10.3 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) -1364 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr10-762 chr10 101442718 101442950 + 10.3 0.000 intron (NM_001256856, intron 2 of 13) intron (NM_001256856, intron 2 of 13) 88669 NM_003939 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr4-159 chr4 99201032 99201264 + 10.3 0.000 intron (NR_037884, intron 3 of 9) AluJo|SINE|Alu 18098 NR_132990 130 Hs.586161 NM_000672 ENSG00000172955 ADH6 ADH-5 alcohol dehydrogenase 6 (class V) protein-coding chr10-434 chr10 41888593 41888825 + 10.3 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 479336 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr1-1465 chr1 156176030 156176262 + 10.3 0.000 intron (NM_001370567, intron 13 of 13) AluJb|SINE|Alu -17786 NR_104411 9673 Hs.532375 NM_014655 ENSG00000160785 SLC25A44 - solute carrier family 25 member 44 protein-coding chr21-133 chr21 31584228 31584460 + 10.3 0.000 Intergenic SVA_D|Retroposon|SVA 25111 NM_001321023 150051 Hs.708976 NM_001321023 LOC150051 - uncharacterized LOC150051 protein-coding chr10-749 chr10 96073872 96074104 + 10.3 0.000 intron (NR_134322, intron 2 of 3) intron (NR_134322, intron 2 of 3) -9589 NR_036113 100422892 NR_036113 ENSG00000266407 MIR3157 mir-3157 microRNA 3157 ncRNA chr12-445 chr12 93773916 93774148 + 10.3 0.000 intron (NM_001320100, intron 2 of 2) AluJb|SINE|Alu -36209 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr21-135 chr21 32044727 32044959 + 10.3 0.000 Intergenic Intergenic 41452 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA chrX-254 chrX 81170859 81171091 + 10.3 0.000 intron (NM_030763, intron 1 of 6) MIRb|SINE|MIR 30938 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr11-313 chr11 60865766 60865998 + 10.3 0.000 Intergenic AluSc8|SINE|Alu -1660 NM_207341 22917 Hs.172130 NM_207341 ENSG00000149506 ZP1 HEL163|OOMD|OOMD1 zona pellucida glycoprotein 1 protein-coding chr11-979 chr11 123432961 123433193 + 10.3 0.000 intron (NM_001367421, intron 2 of 20) AluSq2|SINE|Alu 2808 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr7-780 chr7 98839341 98839573 + 10.3 0.000 Intergenic Intergenic 30557 NM_001134450 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr4-639 chr4 143397975 143398207 + 10.3 0.000 intron (NM_207123, intron 1 of 10) intron (NM_207123, intron 1 of 10) 54631 NR_036091 100423017 NR_036091 ENSG00000265623 MIR3139 - microRNA 3139 ncRNA chr7-500 chr7 76108520 76108752 + 10.3 0.000 non-coding (NR_135079, exon 1 of 6) non-coding (NR_135079, exon 1 of 6) 126 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr10-661 chr10 48450593 48450825 + 10.3 0.000 non-coding (NR_144645, exon 9 of 10) non-coding (NR_144645, exon 9 of 10) 42941 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr12-654 chr12 59546863 59547095 + 10.3 0.000 Intergenic SATR1|Satellite|Satellite -49050 NM_001270622 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr13-294 chr13 49988178 49988410 + 10.3 0.000 intron (NR_152566, intron 13 of 13) AluSc|SINE|Alu 8207 NR_037407 100500908 NR_037407 ENSG00000264864 MIR3613 - microRNA 3613 ncRNA chr8-385 chr8 32243297 32243529 + 10.3 0.000 intron (NM_013962, intron 1 of 4) AluSz6|SINE|Alu -197333 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr1-1227 chr1 6769904 6770136 + 10.3 0.000 Intergenic AluY|SINE|Alu 14960 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr1-421 chr1 143247217 143247449 + 10.3 0.000 Intergenic Intergenic 175259 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr1-1262 chr1 16896851 16897083 + 10.3 0.000 TTS (NR_004400).4 TTS (NR_004400).4 987 NR_004421 6060 NR_004421 ENSG00000207389 RNU1-4 HSD2|HSD5|HSD6|HSD7|RNU1|RNU1D2|RNU1E2|RNU1F1|RNU1G1|RNU1G2|U1B2|U1D2|U1E2|U1F RNA, U1 small nuclear 4 snRNA chr10-54 chr10 41883880 41884112 + 10.3 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 484049 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr4-458 chr4 122604645 122604877 + 10.3 0.000 Intergenic AluSx|SINE|Alu -14222 NR_104126 100996941 Hs.439487 NR_104126 ENSG00000227145 IL21-AS1 - IL21 antisense RNA 1 ncRNA chr7-676 chr7 23490534 23490766 + 10.3 0.000 non-coding (NR_026676, exon 1 of 1) non-coding (NR_026676, exon 1 of 1) 262 NR_026676 256355 Hs.367935 NR_026676 ENSG00000232818 RPS2P32 RPS2_14_794 ribosomal protein S2 pseudogene 32 pseudo chr12-222 chr12 65778308 65778540 + 10.3 0.000 intron (NR_026825, intron 1 of 1) intron (NR_026825, intron 1 of 1) -46036 NM_001330190 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr1-1092 chr1 23908827 23909059 + 10.3 0.000 intron (NM_001841, intron 1 of 1) intron (NM_001841, intron 1 of 1) 4419 NM_001841 1269 Hs.73037 NM_001841 ENSG00000188822 CNR2 CB-2|CB2|CX5 cannabinoid receptor 2 protein-coding chr6-210 chr6 35891630 35891862 + 10.3 0.000 intron (NR_034069, intron 2 of 15) AluSq2|SINE|Alu 29352 NM_003137 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr10-324 chr10 50624051 50624283 + 10.3 0.000 promoter-TSS (NR_126411) promoter-TSS (NR_126411) -211 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr1-1514 chr1 182839498 182839730 + 10.3 0.000 promoter-TSS (NR_148933) promoter-TSS (NR_148933) -23 NR_148933 647070 Hs.191518 NR_148933 LOC647070 - uncharacterized LOC647070 ncRNA chr17-816 chr17 59228786 59229018 + 10.3 0.000 intron (NM_182569, intron 1 of 9) intron (NM_182569, intron 1 of 9) 8391 NM_001165994 284161 Hs.631744 NM_182569 ENSG00000153982 GDPD1 GDE4 glycerophosphodiester phosphodiesterase domain containing 1 protein-coding chr14-354 chr14 68743616 68743848 + 10.3 0.000 Intergenic Intergenic 50182 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr7-738 chr7 56243184 56243416 + 10.3 0.000 Intergenic AluSc8|SINE|Alu -126883 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding chr5-206 chr5 68862361 68862593 + 10.3 0.000 Intergenic Intergenic 167450 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr4-306 chr4 156096097 156096329 + 10.3 0.000 Intergenic AluSc|SINE|Alu -142347 NM_001334 1519 Hs.75262 NM_001334 ENSG00000256043 CTSO CTSO1 cathepsin O protein-coding chr18-131 chr18 46967406 46967638 + 10.1 0.000 intron (NM_001353904, intron 3 of 13) (GT)n|Simple_repeat|Simple_repeat -2878 NM_001242907 100506888 Hs.729823 NM_001242907 ENSG00000274744 ELOA3D ELOA3L2|TCEB3CL2 elongin A3 family member D protein-coding chr2-1123 chr2 217975587 217975819 + 10.1 0.000 Intergenic L2a|LINE|L2 -3004 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr12-745 chr12 124546046 124546278 + 10.1 0.000 intron (NM_001077261, intron 1 of 47) MIRb|SINE|MIR 21450 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr18-39 chr18 56344065 56344297 + 10.1 0.000 Intergenic AluSz6|SINE|Alu -152919 NR_148972 642484 NR_148972 ENSG00000206129 LOC642484 - uncharacterized LOC642484 ncRNA chr1-1172 chr1 185069318 185069550 + 10.1 0.000 intron (NM_007212, intron 1 of 6) AluJb|SINE|Alu 23876 NM_007212 6045 Hs.591490 NM_007212 ENSG00000121481 RNF2 BAP-1|BAP1|DING|HIPI3|RING1B|RING2 ring finger protein 2 protein-coding chr19-854 chr19 46945874 46946106 + 10.1 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -73847 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr19-810 chr19 19640450 19640682 + 10.1 0.000 exon (NM_001288999, exon 5 of 20) exon (NM_001288999, exon 5 of 20) 3091 NM_001288998 51291 Hs.49427 NM_016573 ENSG00000089639 GMIP ARHGAP46 GEM interacting protein protein-coding chr16-493 chr16 3671651 3671883 + 10.1 0.000 exon (NM_016292, exon 11 of 18) exon (NM_016292, exon 11 of 18) 17063 NM_001351825 1773 Hs.629638 NM_005223 ENSG00000213918 DNASE1 DNL1|DRNI deoxyribonuclease 1 protein-coding chr11-959 chr11 118577146 118577378 + 10.1 0.000 intron (NM_001142281, intron 1 of 8) AluSx3|SINE|Alu 4853 NM_001655 372 Hs.33642 NM_001655 ENSG00000095139 ARCN1 COPD|SRMMD archain 1 protein-coding chr16-381 chr16 87431359 87431591 + 10.1 0.000 intron (NM_015144, intron 3 of 12) AluY|SINE|Alu 39139 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr4-281 chr4 952562 952794 + 10.1 0.000 intron (NM_001297424, intron 5 of 8) intron (NM_001297424, intron 5 of 8) 20218 NM_032326 84286 Hs.478936 NM_032326 ENSG00000127419 TMEM175 hTMEM175 transmembrane protein 175 protein-coding chr11-500 chr11 34445444 34445676 + 10.1 0.000 intron (NM_001752, intron 1 of 12) intron (NM_001752, intron 1 of 12) 6626 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr6-625 chr6 154562727 154562959 + 10.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -52158 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr16-672 chr16 80353896 80354128 + 10.1 0.000 intron (NR_120307, intron 2 of 5) MLT1H|LTR|ERVL-MaLR -186722 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding chr6-646 chr6 168078740 168078972 + 10.1 0.000 intron (NR_110312, intron 2 of 15) intron (NR_110312, intron 2 of 15) 356 NM_024919 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr9-663 chr9 116905837 116906069 + 10.1 0.000 intron (NM_014010, intron 9 of 21) intron (NM_014010, intron 9 of 21) 218648 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr7-324 chr7 74533040 74533272 + 10.1 0.000 intron (NM_016328, intron 9 of 26) AluSx|SINE|Alu -62812 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr20-135 chr20 31553183 31553415 + 10.1 0.000 intron (NM_178580, intron 7 of 12) AluSg|SINE|Alu 19964 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr7-655 chr7 4944532 4944764 + 10.1 0.000 intron (NR_072989, intron 1 of 8) intron (NR_072989, intron 1 of 8) 14539 NM_001270375 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding chr17-826 chr17 63674001 63674233 + 10.1 0.000 intron (NM_203351, intron 7 of 16) intron (NM_203351, intron 7 of 16) 26008 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr16-330 chr16 74777804 74778036 + 10.1 0.000 Intergenic AluSp|SINE|Alu -3100 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr12-682 chr12 90115435 90115667 + 10.1 0.000 Intergenic L1MA4A|LINE|L1 167858 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA chr5-264 chr5 3169065 3169297 + 10.1 0.000 Intergenic AluSz|SINE|Alu -8654 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr21-76 chr21 10662320 10662552 + 10.1 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 140922 NM_199259 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr4-547 chr4 49711414 49711646 + 10.1 0.000 Intergenic SAR|Satellite|Satellite 724888 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr8-571 chr8 125619416 125619648 + 10.1 0.000 Intergenic MER103C|DNA|hAT-Charlie 187323 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr9-724 chr9 134297660 134297892 + 10.1 0.000 Intergenic Intergenic -2379 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr21-36 chr21 45982030 45982262 + 10.1 0.000 intron (NM_001848, intron 1 of 34) CpG 397 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr4-487 chr4 1894622 1894854 + 10.1 0.000 intron (NM_007331, intron 2 of 10) L1MEd|LINE|L1 1956 NM_007331 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr20-152 chr20 61537 61769 + 10.1 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -26019 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr17-869 chr17 80469644 80469876 + 10.1 0.000 3' UTR (NM_002522, exon 5 of 5) 3' UTR (NM_002522, exon 5 of 5) 6847 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr3-659 chr3 124172303 124172535 + 10.1 0.000 intron (NM_001024660, intron 1 of 59) intron (NM_001024660, intron 1 of 59) 39490 NR_049798 100847021 NR_049798 ENSG00000266383 MIR5002 - microRNA 5002 ncRNA chr1-908 chr1 41485777 41486009 + 10.1 0.000 Intergenic Intergenic -1210 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr8-111 chr8 70402619 70402851 + 10.1 0.000 intron (NM_001321703, intron 1 of 22) CpG 655 NM_001321707 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr11-668 chr11 3673850 3674082 + 10.1 0.000 Intergenic AluJr|SINE|Alu -2582 NM_001303035 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr6-189 chr6 109395383 109395615 + 10.1 0.000 intron (NM_001286361, intron 5 of 5) MER3|DNA|hAT-Charlie -12687 NM_001142401 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr14-402 chr14 56631651 56631883 + 10.1 0.000 intron (NM_017799, intron 12 of 15) MER50|LTR|ERV1 51969 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding chr15-342 chr15 88044224 88044456 + 10.1 0.000 intron (NM_001007156, intron 13 of 15) AluY|SINE|Alu -98072 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr20-89 chr20 32856001 32856233 + 10.1 0.000 Intergenic AluSz|SINE|Alu -2806 NM_001143967 388795 NM_001143967 ENSG00000215529 EFCAB8 - EF-hand calcium binding domain 8 protein-coding chr1-1398 chr1 86343309 86343541 + 10.1 0.000 Intergenic HERVH48-int|LTR|ERV1 14262 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr15-460 chr15 89203655 89203887 + 10.1 0.000 Intergenic Intergenic 17808 NM_000326 6017 Hs.1933 NM_000326 ENSG00000140522 RLBP1 CRALBP retinaldehyde binding protein 1 protein-coding chr13-148 chr13 71762649 71762881 + 9.91 0.000 intron (NM_080759, intron 1 of 10) AluSp|SINE|Alu 104427 NM_004392 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr1-1377 chr1 70505875 70506107 + 9.91 0.000 Intergenic AluJb|SINE|Alu 94723 NM_001902 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr9-294 chr9 76571669 76571901 + 9.91 0.000 Intergenic LSU-rRNA_Hsa|rRNA|rRNA 71152 NM_001097636 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr20-147 chr20 51825968 51826200 + 9.91 0.000 Intergenic AluSx1|SINE|Alu -23563 NM_020436 57167 Hs.517113 NM_020436 ENSG00000101115 SALL4 DRRS|HSAL4|ZNF797 spalt like transcription factor 4 protein-coding chr6-605 chr6 138738931 138739163 + 9.91 0.000 intron (NR_161205, intron 2 of 2) AluSx1|SINE|Alu -34473 NM_015439 25901 Hs.412019 NM_015439 ENSG00000024862 CCDC28A C6orf80|CCRL1AP coiled-coil domain containing 28A protein-coding chr12-471 chr12 121107837 121108069 + 9.91 0.000 Intergenic L1M1|LINE|L1 -24923 NR_033951 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr9-110 chr9 129800514 129800746 + 9.91 0.000 Intergenic AluSz|SINE|Alu -2513 NR_133948 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding chr6-299 chr6 154519118 154519350 + 9.91 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -8549 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr6-227 chr6 89125690 89125922 + 9.91 0.000 Intergenic AluSx1|SINE|Alu -7735 NM_080743 135295 Hs.254414 NM_080743 ENSG00000154548 SRSF12 SFRS13B|SFRS19|SRrp35 serine and arginine rich splicing factor 12 protein-coding chr16-78 chr16 34062989 34063221 + 9.91 0.000 Intergenic Intergenic -100473 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr9-595 chr9 33413274 33413506 + 9.91 0.000 Intergenic AluY|SINE|Alu -10708 NR_134513 364 Hs.455323 NM_001170 ENSG00000165269 AQP7 AQP7L|AQPap|GLYCQTL aquaporin 7 protein-coding chr20-252 chr20 3878137 3878369 + 9.91 0.000 Intergenic AluSx3|SINE|Alu -10528 NM_024960 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr20-263 chr20 33512510 33512742 + 9.91 0.000 intron (NM_001032999, intron 1 of 10) L1ME3A|LINE|L1 22530 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr12-591 chr12 23184390 23184622 + 9.91 0.000 intron (NR_120471, intron 1 of 4) FLAM_C|SINE|Alu 8870 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr5-406 chr5 72996134 72996366 + 9.91 0.000 intron (NM_001146032, intron 5 of 24) AluSq|SINE|Alu 40209 NM_138782 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr5-660 chr5 115667749 115667981 + 9.91 0.000 intron (NR_104674, intron 1 of 4) AluSg|SINE|Alu 4787 NR_104674 102467217 Hs.147738 NR_104674 LOC102467217 - uncharacterized LOC102467217 ncRNA chr13-96 chr13 89434708 89434940 + 9.91 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 65685 NR_131228 105370308 Hs.599406 NR_131228 ENSG00000226037 LINC01040 TCONS_00021682 long intergenic non-protein coding RNA 1040 ncRNA chr1-1015 chr1 203026274 203026506 + 9.91 0.000 promoter-TSS (NM_001304332) promoter-TSS (NM_001304332) -101 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr22-399 chr22 38330671 38330903 + 9.91 0.000 intron (NM_001289912, intron 5 of 14) AluSx3|SINE|Alu -12703 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr4-490 chr4 2442117 2442349 + 9.91 0.000 intron (NM_001193282, intron 4 of 15) intron (NM_001193282, intron 4 of 15) 23278 NM_001193282 402160 Hs.443116 NM_001193282 ENSG00000206113 CFAP99 - cilia and flagella associated protein 99 protein-coding chr1-1091 chr1 23678433 23678665 + 9.91 0.000 Intergenic MER5A1|DNA|hAT-Charlie -13230 NM_001199802 6135 Hs.719951 NM_000975 ENSG00000142676 RPL11 DBA7|GIG34|L11|uL5 ribosomal protein L11 protein-coding chr10-539 chr10 32346931 32347163 + 9.91 0.000 promoter-TSS (NR_104163) promoter-TSS (NR_104163) 111 NM_001272019 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr19-306 chr19 40435372 40435604 + 9.91 0.000 Intergenic AluSz|SINE|Alu 7110 NM_013368 29946 Hs.515412 NM_013368 ENSG00000167565 SERTAD3 RBT1 SERTA domain containing 3 protein-coding chr13-288 chr13 48026096 48026328 + 9.91 0.000 Intergenic AluSz|SINE|Alu -11355 NR_136687 55270 Hs.144407 NM_018283 ENSG00000136159 NUDT15 MTH2|NUDT15D nudix hydrolase 15 protein-coding chr11-491 chr11 3661264 3661496 + 9.91 0.000 exon (NM_004314, exon 4 of 5) exon (NM_004314, exon 4 of 5) 10004 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr14-233 chr14 84622214 84622446 + 9.91 0.000 Intergenic L1MEc|LINE|L1 -649602 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr2-707 chr2 202149533 202149765 + 9.91 0.000 intron (NM_001277372, intron 13 of 23) intron (NM_001277372, intron 13 of 23) -32591 NR_135243 729224 Hs.623895 NR_135243 KIAA2012-AS1 - KIAA2012 antisense RNA 1 ncRNA chr3-653 chr3 113618967 113619199 + 9.91 0.000 intron (NR_136285, intron 16 of 20) AluSx|SINE|Alu 24207 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA chr14-249 chr14 33955143 33955375 + 9.91 0.000 Intergenic L1MB5|LINE|L1 -4185 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr3-267 chr3 20192501 20192733 + 9.91 0.000 Intergenic AluSx|SINE|Alu -6384 NM_001012413 151648 Hs.105153 NM_138484 ENSG00000129810 SGO1 CAID|NY-BR-85|SGO|SGOL1 shugoshin 1 protein-coding chr10-831 chr10 132379077 132379309 + 9.91 0.000 3' UTR (NM_030626, exon 11 of 11) 3' UTR (NM_030626, exon 11 of 11) -18007 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr12-574 chr12 3278336 3278568 + 9.91 0.000 exon (NM_006675, exon 4 of 9) exon (NM_006675, exon 4 of 9) 87670 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr1-1144 chr1 116819925 116820157 + 9.91 0.000 Intergenic Intergenic 65611 NM_001328609 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding chr11-882 chr11 68138886 68139118 + 9.91 0.000 Intergenic AluSx1|SINE|Alu -17611 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr20-250 chr20 3209921 3210153 + 9.91 0.000 intron (NM_001267623, intron 1 of 5) intron (NM_001267623, intron 1 of 5) 539 NM_033453 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr9-628 chr9 93871941 93872173 + 9.91 0.000 Intergenic Intergenic 52700 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA chr15-464 chr15 89823343 89823575 + 9.91 0.000 Intergenic Intergenic -8607 NM_001150 290 Hs.1239 NM_001150 ENSG00000166825 ANPEP APN|CD13|GP150|LAP1|P150|PEPN alanyl aminopeptidase, membrane protein-coding chr19-825 chr19 36099130 36099362 + 9.91 0.000 intron (NM_001083961, intron 21 of 31) AluSx1|SINE|Alu -11957 NM_001302757 728361 Hs.143920 NM_001270948 ENSG00000105261 OVOL3 HOVO3 ovo like zinc finger 3 protein-coding chr4-78 chr4 49651300 49651532 + 9.91 0.000 Intergenic (GAATG)n|Satellite|Satellite 664774 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr5-498 chr5 56078929 56079161 + 9.91 0.000 Intergenic Intergenic 83878 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr2-924 chr2 40897656 40897888 + 9.91 0.000 Intergenic L2a|LINE|L2 -385337 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr1-1496 chr1 167455070 167455302 + 9.91 0.000 intron (NM_000734, intron 1 of 7) CpG 63343 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr13-199 chr13 104149621 104149853 + 9.91 0.000 Intergenic L1M5|LINE|L1 724537 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr14-482 chr14 104373371 104373603 + 9.91 0.000 Intergenic Intergenic 149903 NR_146612 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr11-846 chr11 64604490 64604722 + 9.91 0.000 Intergenic Intergenic 13386 NM_001276326 116085 Hs.174424 NM_144585 ENSG00000197891 SLC22A12 OAT4L|RST|URAT1 solute carrier family 22 member 12 protein-coding GL000216.2-7 GL000216.2 632 864 + 9.91 0.000 NA NA NA NA chr2-1136 chr2 230890053 230890285 + 9.91 0.000 intron (NR_038238, intron 1 of 3) MSTB1|LTR|ERVL-MaLR 3623 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr9-690 chr9 126964432 126964664 + 9.91 0.000 intron (NM_001190729, intron 2 of 17) MIRb|SINE|MIR 2323 NM_001366401 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr1-1340 chr1 42388476 42388708 + 9.91 0.000 intron (NM_173642, intron 1 of 4) AluSg7|SINE|Alu 7800 NM_173642 284716 Hs.420244 NM_173642 ENSG00000177181 RIMKLA FAM80A|NAAGS|NAAGS-II ribosomal modification protein rimK like family member A protein-coding chr11-730 chr11 117281582 117281814 + 9.91 0.000 exon (NM_001278249, exon 10 of 15) exon (NM_001278249, exon 10 of 15) -9648 NR_037803 100379571 Hs.736305 NR_037803 BACE1-AS BACE1-AS1|BACE1AS|NCRNA00177 BACE1 antisense RNA ncRNA chr9-556 chr9 134010372 134010604 + 9.91 0.000 Intergenic ERVL-E-int|LTR|ERVL -14988 NR_149319 266655 Hs.654869 NM_001355256 ENSG00000235106 BRD3OS LINC00094|LP2477|NCRNA00094 BRD3 opposite strand protein-coding chr4-608 chr4 115917478 115917710 + 9.91 0.000 Intergenic Intergenic -382131 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chrX-146 chrX 119864719 119864951 + 9.91 0.000 Intergenic AluJo|SINE|Alu 6898 NM_006978 7737 Hs.458365 NM_006978 ENSG00000125352 RNF113A Cwc24|RNF113|TTD5|ZNF183 ring finger protein 113A protein-coding chr9-354 chr9 37453260 37453492 + 9.91 0.000 intron (NM_014872, intron 1 of 1) AluJo|SINE|Alu 12074 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr1-1397 chr1 86319343 86319575 + 9.91 0.000 Intergenic Intergenic 38228 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr2-928 chr2 42533666 42533898 + 9.91 0.000 intron (NM_001282755, intron 2 of 17) AluSc8|SINE|Alu -34263 NM_001282756 57504 Hs.435413 NM_020744 ENSG00000057935 MTA3 - metastasis associated 1 family member 3 protein-coding chr4-213 chr4 49652372 49652604 + 9.91 0.000 Intergenic (GAATG)n|Satellite|Satellite 665846 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr2-1061 chr2 173964722 173964954 + 9.91 0.000 promoter-TSS (NM_001017371) promoter-TSS (NM_001017371) 864 NM_003111 6670 Hs.531587 NM_003111 ENSG00000172845 SP3 SPR2 Sp3 transcription factor protein-coding chr7-589 chr7 67434007 67434239 + 9.91 0.000 Intergenic AluSq2|SINE|Alu 98147 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr12-570 chr12 2737548 2737780 + 9.71 0.000 Intergenic Intergenic -46507 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chr9-406 chr9 30100205 30100437 + 9.71 0.000 Intergenic L1MA10|LINE|L1 308133 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA chr7-357 chr7 39414522 39414754 + 9.71 0.000 intron (NM_001370959, intron 6 of 9) CpG -8292 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr4-171 chr4 920326 920558 + 9.71 0.000 intron (NM_005255, intron 1 of 27) intron (NM_005255, intron 1 of 27) 11874 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr2-868 chr2 453113 453345 + 9.71 0.000 Intergenic Intergenic 39426 NR_146436 727944 NR_146436 ENSG00000223985 LINC01874 - long intergenic non-protein coding RNA 1874 ncRNA chr14-288 chr14 61318103 61318335 + 9.71 0.000 Intergenic AluJb|SINE|Alu -3224 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr14-440 chr14 80583977 80584209 + 9.71 0.000 intron (NM_152446, intron 19 of 24) intron (NM_152446, intron 19 of 24) -353036 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr4-645 chr4 146142356 146142588 + 9.71 0.000 Intergenic AluSq2|SINE|Alu -20559 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr7-228 chr7 25141459 25141691 + 9.71 0.000 intron (NM_138811, intron 9 of 9) AluSc5|SINE|Alu -16214 NM_018947 54205 Hs.437060 NM_018947 ENSG00000172115 CYCS CYC|HCS|THC4 cytochrome c, somatic protein-coding chr6-298 chr6 152627933 152628165 + 9.71 0.000 intron (NM_182961, intron 3 of 145) (A)n|Simple_repeat|Simple_repeat 8802 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr2-469 chr2 109214333 109214565 + 9.71 0.000 intron (NM_001099289, intron 1 of 9) L1PA6|LINE|L1 -72861 NR_036223 100422863 NR_036223 ENSG00000264934 MIR4265 - microRNA 4265 ncRNA chr18-153 chr18 26184788 26185020 + 9.71 0.000 intron (NM_144662, intron 6 of 6) AluSq2|SINE|Alu -41541 NR_121653 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding chr12-604 chr12 30410070 30410302 + 9.71 0.000 Intergenic AluSc8|SINE|Alu 267058 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding chr1-1028 chr1 209097344 209097576 + 9.71 0.000 Intergenic MIRb|SINE|MIR 125006 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr4-658 chr4 158684254 158684486 + 9.71 0.000 intron (NM_001281737, intron 2 of 11) AluSx1|SINE|Alu 2262 NM_001281738 2110 Hs.155729 NM_004453 ENSG00000171503 ETFDH ETFQO|MADD electron transfer flavoprotein dehydrogenase protein-coding chr16-376 chr16 81827036 81827268 + 9.71 0.000 intron (NM_002661, intron 2 of 32) intron (NM_002661, intron 2 of 32) 47861 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr19-594 chr19 12941250 12941482 + 9.71 0.000 TTS (NR_106770) TTS (NR_106770) 882 NR_106770 102466659 NR_106770 ENSG00000274417 MIR6515 hsa-mir-6515|mir-6515 microRNA 6515 ncRNA chr16-664 chr16 75000060 75000292 + 9.71 0.000 intron (NM_032268, intron 1 of 4) CpG 1152 NM_032268 84937 Hs.427284 NM_032268 ENSG00000186187 ZNRF1 NIN283 zinc and ring finger 1 protein-coding chr16-246 chr16 70282250 70282482 + 9.71 0.000 intron (NM_001605, intron 2 of 20) MIRb|SINE|MIR 7143 NM_001605 16 Hs.315137 NM_001605 ENSG00000090861 AARS CMT2N|EIEE29 alanyl-tRNA synthetase protein-coding chr12-430 chr12 52995188 52995420 + 9.71 0.000 Intergenic AluJb|SINE|Alu -11152 NM_001417 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr10-409 chr10 130790501 130790733 + 9.71 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 172051 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr2-382 chr2 42925160 42925392 + 9.71 0.000 Intergenic Intergenic 114267 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA chr17-846 chr17 75843830 75844062 + 9.71 0.000 intron (NM_199242, intron 1 of 31) intron (NM_199242, intron 1 of 31) 771 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr5-616 chr5 61631777 61632009 + 9.71 0.000 Intergenic Intergenic -5867 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA chr10-732 chr10 88565140 88565372 + 9.71 0.000 intron (NM_018363, intron 4 of 6) intron (NM_018363, intron 4 of 6) 18062 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding GL000225.1-16 GL000225.1 104119 104351 + 9.71 0.000 NA NA NA NA chr3-596 chr3 2849875 2850107 + 9.71 0.000 intron (NM_175607, intron 7 of 24) AluSg|SINE|Alu -42224 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr12-327 chr12 123397541 123397773 + 9.71 0.000 intron (NR_136910, intron 5 of 8) intron (NR_136910, intron 5 of 8) 6382 NM_001324506 387893 Hs.443735 NM_020382 ENSG00000183955 KMT5A PR-Set7|PR/SET07|SET07|SET8|SETD8 lysine methyltransferase 5A protein-coding chr16-571 chr16 4053907 4054139 + 9.71 0.000 intron (NM_001116, intron 2 of 10) L2a|LINE|L2 62419 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr16-447 chr16 66893619 66893851 + 9.71 0.000 Intergenic AluSx|SINE|Alu 13220 NM_001329932 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr11-558 chr11 18199842 18200074 + 9.71 0.000 Intergenic L1MD2|LINE|L1 -9180 NR_026564 494141 Hs.446327 NR_026541 ENSG00000189332 SLC25A51P4 - SLC25A51 pseudogene 4 pseudo chr10-281 chr10 66978855 66979087 + 9.71 0.000 intron (NM_178011, intron 2 of 2) AluSx1|SINE|Alu 33182 NR_111911 101928961 Hs.687014 NR_111911 LOC101928961 - uncharacterized LOC101928961 ncRNA chr10-658 chr10 47417931 47418163 + 9.71 0.000 Intergenic Intergenic -3572 NR_134499 105378292 Hs.131331 NR_134499 LOC105378292 - uncharacterized LOC105378292 ncRNA chr4-640 chr4 144221344 144221576 + 9.71 0.000 Intergenic MIRc|SINE|MIR -80742 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr10-637 chr10 32239099 32239331 + 9.71 0.000 Intergenic AluSx1|SINE|Alu 107943 NM_001272019 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr12-586 chr12 15013578 15013810 + 9.71 0.000 Intergenic Intergenic 11861 NR_120466 101928340 Hs.401232 NR_120466 ENSG00000255727 LINC01489 - long intergenic non-protein coding RNA 1489 ncRNA chr6-334 chr6 36013129 36013361 + 9.71 0.000 intron (NM_001193476, intron 2 of 19) AluSx|SINE|Alu 11255 NM_138718 116369 Hs.435836 NM_052961 ENSG00000112053 SLC26A8 SPGF3|TAT1 solute carrier family 26 member 8 protein-coding KI270736.1-10 KI270736.1 58512 58744 + 9.71 0.000 NA NA NA NA chr11-769 chr11 4183282 4183514 + 9.71 0.000 Intergenic MamRep1879|DNA|hAT-Tip100? -3754 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr15-250 chr15 41904865 41905097 + 9.71 0.000 intron (NM_139265, intron 5 of 5) intron (NM_139265, intron 5 of 5) -10928 NM_016642 51332 Hs.709819 NM_016642 ENSG00000137877 SPTBN5 BSPECV|HUBSPECV|HUSPECV spectrin beta, non-erythrocytic 5 protein-coding chr1-1093 chr1 24126798 24127030 + 9.71 0.000 intron (NM_021258, intron 5 of 6) AluSz|SINE|Alu -14779 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr10-374 chr10 37093488 37093720 + 9.71 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -32253 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr2-546 chr2 137590675 137590907 + 9.71 0.000 intron (NM_001316349, intron 17 of 27) L1M5|LINE|L1 337141 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA chr19-514 chr19 1832826 1833058 + 9.71 0.000 intron (NM_020695, intron 1 of 15) intron (NM_020695, intron 1 of 15) 10853 NR_152847 100288123 Hs.662426 NR_034114 ENSG00000267244 LOC100288123 - uncharacterized LOC100288123 ncRNA chr2-465 chr2 105851209 105851441 + 9.71 0.000 promoter-TSS (NM_001004720) promoter-TSS (NM_001004720) -522 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr14-357 chr14 72960031 72960263 + 9.71 0.000 TTS (NR_147990) TTS (NR_147990) 26809 NM_178441 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr11-642 chr11 108498309 108498541 + 9.51 0.000 promoter-TSS (NM_153705) promoter-TSS (NM_153705) -41 NM_001363503 143888 Hs.83286 NM_153705 ENSG00000178202 POGLUT3 KDELC2 protein O-glucosyltransferase 3 protein-coding chr6-286 chr6 89651214 89651446 + 9.51 0.000 intron (NM_014611, intron 95 of 101) AluSx1|SINE|Alu -12583 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding chr5-352 chr5 145291238 145291470 + 9.51 0.000 Intergenic AluSc|SINE|Alu 543988 NM_138492 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding chr16-706 chr16 87603186 87603418 + 9.51 0.000 exon (NM_001271605, exon 1 of 2) exon (NM_001271605, exon 1 of 2) 794 NM_020655 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr6-441 chr6 70621504 70621736 + 9.51 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -46263 NM_001281439 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr4-222 chr4 128112519 128112751 + 9.51 0.000 intron (NR_146772, intron 9 of 19) AluSx1|SINE|Alu 51323 NM_032239 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr10-75 chr10 41883096 41883328 + 9.51 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 484833 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr3-710 chr3 13298363 13298595 + 9.51 0.000 Intergenic MIR3|SINE|MIR 121843 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding chr5-502 chr5 72163003 72163235 + 9.51 0.000 intron (NM_005909, intron 2 of 6) AluSg|SINE|Alu -6348 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA chr16-596 chr16 29926659 29926891 + 9.51 0.000 promoter-TSS (NR_110933) promoter-TSS (NR_110933) -549 NM_178863 253980 Hs.534590 NM_178863 ENSG00000174943 KCTD13 BACURD1|FKSG86|PDIP1|POLDIP1|hBACURD1 potassium channel tetramerization domain containing 13 protein-coding chr1-732 chr1 20612711 20612943 + 9.51 0.000 intron (NM_001785, intron 2 of 3) AluSg|SINE|Alu -20631 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chr7-587 chr7 64475067 64475299 + 9.51 0.000 Intergenic Intergenic 41490 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo chr20-115 chr20 17574780 17575012 + 9.51 0.000 intron (NM_006870, intron 1 of 3) AluJr|SINE|Alu 4821 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr11-534 chr11 125913053 125913285 + 9.51 0.000 intron (NM_013264, intron 8 of 11) AluY|SINE|Alu 8661 NM_013264 29118 Hs.420263 NM_013264 ENSG00000109832 DDX25 GRTH DEAD-box helicase 25 protein-coding chr10-544 chr10 53362484 53362716 + 9.51 0.000 Intergenic Intergenic -590900 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr12-490 chr12 4695650 4695882 + 9.51 0.000 Intergenic Intergenic 24336 NR_110112 101929549 Hs.663336 NR_110112 ENSG00000255474 GAU1 GALNT8-DT GALNT8 antisense upstream 1 ncRNA chr11-771 chr11 6298681 6298913 + 9.51 0.000 Intergenic Intergenic 21704 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr3-657 chr3 116870916 116871148 + 9.51 0.000 Intergenic Tigger12c|DNA|TcMar-Tigger -20665 NR_039649 100616485 NR_039649 ENSG00000265433 MIR4447 - microRNA 4447 ncRNA chr17-684 chr17 78487059 78487291 + 9.51 0.000 intron (NM_173628, intron 44 of 80) MIR|SINE|MIR 2265 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr2-1098 chr2 202234390 202234622 + 9.51 0.000 intron (NR_163943, intron 1 of 5) intron (NR_163943, intron 1 of 5) 4091 NM_001371392 chr10-499 chr10 118396721 118396953 + 9.51 0.000 Intergenic AluSp|SINE|Alu 39729 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr8-595 chr8 141853940 141854172 + 9.51 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -67743 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr4-629 chr4 135857695 135857927 + 9.51 0.000 Intergenic Intergenic 30282 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA chr15-58 chr15 59407213 59407445 + 9.51 0.000 Intergenic AluY|SINE|Alu -30857 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr9-727 chr9 134377783 134378015 + 9.51 0.000 intron (NM_002957, intron 1 of 9) intron (NM_002957, intron 1 of 9) -1396 NM_001291920 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr12-339 chr12 12725488 12725720 + 9.51 0.000 promoter-TSS (NM_001130415) promoter-TSS (NM_001130415) -313 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr19-821 chr19 34404313 34404545 + 9.51 0.000 promoter-TSS (NM_001353433) promoter-TSS (NM_001353433) 30 NM_032346 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr22-235 chr22 25191011 25191243 + 9.51 0.000 intron (NM_001145206, intron 10 of 10) intron (NM_001145206, intron 10 of 10) -8731 NM_004076 1417 Hs.533022 NM_004076 ENSG00000100053 CRYBB3 CATCN2|CRYB3|CTRCT22 crystallin beta B3 protein-coding chr17-142 chr17 15959365 15959597 + 9.51 0.000 intron (NM_000676, intron 1 of 1) intron (NM_000676, intron 1 of 1) 14564 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr21-51 chr21 29019250 29019482 + 9.51 0.000 promoter-TSS (NM_016940) promoter-TSS (NM_016940) 5 NM_001320724 10069 Hs.713123 NM_016940 ENSG00000156253 RWDD2B C21orf6|GL011 RWD domain containing 2B protein-coding chr8-518 chr8 85057645 85057877 + 9.51 0.000 Intergenic Intergenic -49477 NM_001349638 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding chr10-298 chr10 341958 342190 + 9.51 0.000 intron (NM_014974, intron 28 of 36) intron (NM_014974, intron 28 of 36) 162080 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr19-791 chr19 12995405 12995637 + 9.51 0.000 promoter-TSS (NM_002501) promoter-TSS (NM_002501) 46 NM_002501 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chrX-219 chrX 39583520 39583752 + 9.51 0.000 Intergenic Intergenic -77580 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chrX-203 chrX 19882630 19882862 + 9.51 0.000 intron (NM_031892, intron 1 of 17) intron (NM_031892, intron 1 of 17) 4854 NM_001353891 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr17-798 chr17 48781917 48782149 + 9.51 0.000 intron (NM_001130918, intron 13 of 15) MLT1A0|LTR|ERVL-MaLR 12291 NM_173623 284076 Hs.91930 NM_173623 ENSG00000170703 TTLL6 TTL.6 tubulin tyrosine ligase like 6 protein-coding chr5-495 chr5 45863339 45863571 + 9.51 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -167075 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding chr19-577 chr19 7520091 7520323 + 9.51 0.000 exon (NM_018083, exon 2 of 2) exon (NM_018083, exon 2 of 2) -2417 NM_020533 57192 Hs.631858 NM_020533 ENSG00000090674 MCOLN1 MG-2|ML1|ML4|MLIV|MST080|MSTP080|TRP-ML1|TRPM-L1|TRPML1 mucolipin 1 protein-coding chr6-271 chr6 36858056 36858288 + 9.51 0.000 intron (NM_016059, intron 2 of 3) AluSx3|SINE|Alu -13672 NM_001286636 221477 Hs.433381 NM_152734 ENSG00000198663 C6orf89 BRAP|PS1TP5TP1 chromosome 6 open reading frame 89 protein-coding chr10-530 chr10 13221391 13221623 + 9.51 0.000 TTS (NM_001303118) TTS (NM_001303118) 4238 NR_125730 103625684 NR_125730 ENSG00000207357 RNU6-2 U6-2 RNA, U6 small nuclear 2 snRNA chr7-673 chr7 19940536 19940768 + 9.51 0.000 intron (NR_110114, intron 5 of 5) intron (NR_110114, intron 5 of 5) -167035 NM_001366628 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chrX-131 chrX 76173074 76173306 + 9.51 0.000 intron (NM_016500, intron 1 of 5) intron (NM_016500, intron 1 of 5) 128 NM_016500 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr1-1356 chr1 52208370 52208602 + 9.51 0.000 intron (NM_007324, intron 1 of 17) intron (NM_007324, intron 1 of 17) 66392 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chrX-162 chrX 19812608 19812840 + 9.51 0.000 intron (NM_031892, intron 2 of 17) AluSx|SINE|Alu -12951 NM_001024666 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr4-228 chr4 182660978 182661210 + 9.51 0.000 intron (NM_001080477, intron 6 of 27) intron (NM_001080477, intron 6 of 27) 256159 NM_001351744 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr13-203 chr13 111441691 111441923 + 9.51 0.000 Intergenic L2a|LINE|L2 121165 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding chr3-256 chr3 138173922 138174154 + 9.51 0.000 intron (NM_016216, intron 1 of 7) AluSq|SINE|Alu 883 NM_016216 51163 Hs.477700 NM_016216 ENSG00000138231 DBR1 - debranching RNA lariats 1 protein-coding chr14-360 chr14 82413093 82413325 + 9.51 0.000 Intergenic Intergenic -229423 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr10-646 chr10 34847533 34847765 + 9.51 0.000 Intergenic AluSx|SINE|Alu 31881 NR_108043 100505601 Hs.549790 NR_108043 ENSG00000226386 PARD3-AS1 - PARD3 antisense RNA 1 ncRNA chr8-482 chr8 38018448 38018680 + 9.51 0.000 Intergenic AluSx|SINE|Alu -11970 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr21-77 chr21 15730107 15730339 + 9.51 0.000 5' UTR (NM_001352561, exon 1 of 24) 5' UTR (NM_001352561, exon 1 of 24) 241 NM_001352560 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr6-415 chr6 169586762 169586994 + 9.51 0.000 intron (NM_182552, intron 23 of 25) Tigger2|DNA|TcMar-Tigger 115151 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr1-694 chr1 204151826 204152058 + 9.51 0.000 5' UTR (NM_001297761, exon 1 of 7) 5' UTR (NM_001297761, exon 1 of 7) 102 NM_001297762 55224 Hs.497469 NM_018208 ENSG00000143845 ETNK2 EKI2|HMFT1716 ethanolamine kinase 2 protein-coding chr16-582 chr16 10699784 10700016 + 9.51 0.000 Intergenic SATR2|Satellite|Satellite -4970 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr1-733 chr1 20872591 20872823 + 9.51 0.000 intron (NM_003760, intron 15 of 31) L1ME3A|LINE|L1 -86019 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr5-307 chr5 154652697 154652929 + 9.51 0.000 Intergenic AluSx|SINE|Alu -30166 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr13-263 chr13 34069874 34070106 + 9.51 0.000 Intergenic Intergenic 251841 NM_002915 5983 Hs.115474 NM_002915 ENSG00000133119 RFC3 RFC38 replication factor C subunit 3 protein-coding chr2-922 chr2 38696229 38696461 + 9.51 0.000 intron (NM_138801, intron 4 of 6) AluSq2|SINE|Alu 30231 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr3-450 chr3 138959818 138960050 + 9.51 0.000 Intergenic AluSx1|SINE|Alu 12717 NM_001040061 401089 Hs.591303 NM_001040061 ENSG00000206262 FOXL2NB C3orf72 FOXL2 neighbor protein-coding chr11-709 chr11 69695723 69695955 + 9.51 0.000 Intergenic Intergenic 8183 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr21-147 chr21 37073541 37073773 + 9.51 0.000 promoter-TSS (NM_153681) promoter-TSS (NM_153681) 403 NM_001320703 7267 Hs.368214 NM_003316 ENSG00000182670 TTC3 DCRR1|RNF105|TPRDIII tetratricopeptide repeat domain 3 protein-coding chr5-368 chr5 6016786 6017018 + 9.51 0.000 Intergenic Intergenic 320390 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA chr16-554 chr16 1327379 1327611 + 9.51 0.000 TTS (NM_003345) TTS (NM_003345) -6150 NM_001286464 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr8-384 chr8 31215053 31215285 + 9.31 0.000 Intergenic AluJr4|SINE|Alu -181813 NM_001015508 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr17-653 chr17 49646520 49646752 + 9.31 0.000 promoter-TSS (NM_001370731) promoter-TSS (NM_001370731) -118 NM_001370730 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding GL000220.1-2 GL000220.1 119781 120013 + 9.31 0.000 NA NA NA NA chr17-793 chr17 47355479 47355711 + 9.31 0.000 intron (NM_152347, intron 9 of 24) AluSc|SINE|Alu 31640 NM_152347 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding chr2-693 chr2 176977749 176977981 + 9.31 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 234546 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA chr10-824 chr10 127150293 127150525 + 9.31 0.000 intron (NM_001039762, intron 5 of 5) intron (NM_001039762, intron 5 of 5) 46182 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr15-344 chr15 94393927 94394159 + 9.31 0.000 intron (NM_018349, intron 13 of 21) AluSx|SINE|Alu 38113 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding chr2-1063 chr2 174605894 174606126 + 9.31 0.000 intron (NM_001077269, intron 1 of 7) intron (NM_001077269, intron 1 of 7) 28595 NM_003387 7456 Hs.128067 NM_003387 ENSG00000115935 WIPF1 PRPL-2|WAS2|WASPIP|WIP WAS/WASL interacting protein family member 1 protein-coding chr1-845 chr1 15738780 15739012 + 9.31 0.000 intron (NM_207348, intron 4 of 4) MIRb|SINE|MIR 2638 NM_207348 284723 Hs.631867 NM_207348 ENSG00000162461 SLC25A34 - solute carrier family 25 member 34 protein-coding chr9-349 chr9 7242409 7242641 + 9.31 0.000 Intergenic Intergenic 485175 NR_148677 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr21-52 chr21 31188830 31189062 + 9.31 0.000 intron (NM_001353686, intron 13 of 27) intron (NM_001353686, intron 13 of 27) -28006 NM_001353685 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr12-560 chr12 542435 542667 + 9.31 0.000 intron (NM_173593, intron 3 of 19) intron (NM_173593, intron 3 of 19) 43935 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr16-576 chr16 5653435 5653667 + 9.31 0.000 Intergenic Intergenic 21084 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA chr4-555 chr4 59200598 59200830 + 9.31 0.000 Intergenic LTR16|LTR|ERVL 187141 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA chr7-509 chr7 94375316 94375548 + 9.31 0.000 intron (NR_147206, intron 5 of 5) intron (NR_147206, intron 5 of 5) 16760 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr19-819 chr19 33762776 33763008 + 9.31 0.000 intron (NM_001127895, intron 3 of 4) AluSx1|SINE|Alu -33978 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr6-451 chr6 104318153 104318385 + 9.31 0.000 Intergenic AluY|SINE|Alu 541277 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr12-700 chr12 106704060 106704292 + 9.31 0.000 intron (NM_001206691, intron 8 of 17) L2a|LINE|L2 19447 NM_032491 5992 Hs.388827 NM_002920 ENSG00000111783 RFX4 NYD-SP10 regulatory factor X4 protein-coding chr14-429 chr14 74413502 74413734 + 9.31 0.000 intron (NM_001105579, intron 1 of 3) L1ME4a|LINE|L1 12592 NM_001105579 646658 Hs.12400 NM_001105579 ENSG00000183379 SYNDIG1L CAPUCIN|DSPC1|IFITMD4|TMEM90A synapse differentiation inducing 1 like protein-coding chr21-136 chr21 32450301 32450533 + 9.31 0.000 intron (NM_001320744, intron 1 of 5) intron (NM_001320744, intron 1 of 5) 37711 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr11-306 chr11 15042724 15042956 + 9.31 0.000 Intergenic Intergenic -30753 NM_000728 797 Hs.534305 NM_000728 ENSG00000175868 CALCB CALC2|CGRP-II|CGRP2 calcitonin related polypeptide beta protein-coding chr6-384 chr6 133395135 133395367 + 9.31 0.000 intron (NM_172103, intron 3 of 18) L2a|LINE|L2 153752 NM_001301013 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr6-607 chr6 141386513 141386745 + 9.31 0.000 Intergenic AluSz6|SINE|Alu 702170 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr10-503 chr10 121186403 121186635 + 9.31 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 335157 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding chr4-609 chr4 118829542 118829774 + 9.31 0.000 intron (NM_014822, intron 2 of 22) AluSp|SINE|Alu 6468 NM_014822 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr8-506 chr8 70122279 70122511 + 9.31 0.000 intron (NM_001321711, intron 20 of 21) AluJr|SINE|Alu -51143 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr16-355 chr16 28545052 28545284 + 9.31 0.000 Intergenic L1ME3G|LINE|L1 -6194 NM_012385 26471 Hs.513463 NM_012385 ENSG00000176046 NUPR1 COM1|P8 nuclear protein 1, transcriptional regulator protein-coding chr9-380 chr9 130084276 130084508 + 9.31 0.000 intron (NM_020960, intron 6 of 17) AluSz|SINE|Alu 30486 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr17-294 chr17 3858922 3859154 + 9.31 0.000 Intergenic MER21B|LTR|ERVL -12792 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chr12-707 chr12 109167528 109167760 + 9.31 0.000 intron (NM_001093, intron 3 of 52) (TA)n|Simple_repeat|Simple_repeat 51057 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr5-465 chr5 163333174 163333406 + 9.31 0.000 Intergenic AluY|SINE|Alu -104281 NM_001364021 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding chr6-352 chr6 56764106 56764338 + 9.31 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 79443 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr19-860 chr19 48119326 48119558 + 9.31 0.000 intron (NM_000234, intron 24 of 27) intron (NM_000234, intron 24 of 27) -8590 NM_001159322 8605 Hs.631562 NM_003706 ENSG00000105499 PLA2G4C CPLA2-gamma phospholipase A2 group IVC protein-coding chr2-557 chr2 190010931 190011163 + 9.31 0.000 Intergenic L1MA7|LINE|L1 51682 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding chr3-679 chr3 186675845 186676077 + 9.31 0.000 intron (NM_000412, intron 6 of 6) AluSp|SINE|Alu 10009 NM_000412 3273 Hs.1498 NM_000412 ENSG00000113905 HRG HPRG|HRGP|THPH11 histidine rich glycoprotein protein-coding chr2-1127 chr2 219571306 219571538 + 9.31 0.000 promoter-TSS (NM_002191) promoter-TSS (NM_002191) 117 NM_015311 23363 Hs.526594 NM_015311 ENSG00000124006 OBSL1 - obscurin like 1 protein-coding chr2-877 chr2 8742128 8742360 + 9.31 0.000 intron (NM_001348739, intron 24 of 28) AluJo|SINE|Alu 60188 NM_002166 3398 Hs.180919 NM_002166 ENSG00000115738 ID2 GIG8|ID2A|ID2H|bHLHb26 inhibitor of DNA binding 2 protein-coding chr4-673 chr4 182448140 182448372 + 9.31 0.000 intron (NM_001080477, intron 3 of 27) CpG 204854 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr4-341 chr4 39496184 39496416 + 9.31 0.000 Intergenic AluSp|SINE|Alu 16045 NR_026854 401127 Hs.383197 NR_026854 ENSG00000224097 LOC401127 - WD repeat domain 5 pseudogene pseudo chr8-605 chr8 143289469 143289701 + 9.31 0.000 Intergenic CpG -1832 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr7-617 chr7 129530166 129530398 + 9.31 0.000 Intergenic AluJr|SINE|Alu 27751 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr12-691 chr12 100388016 100388248 + 9.31 0.000 intron (NM_001145288, intron 2 of 10) L2a|LINE|L2 31058 NM_001145288 246213 Hs.116871 NM_139319 ENSG00000179520 SLC17A8 DFNA25|VGLUT3 solute carrier family 17 member 8 protein-coding chr16-726 chr16 89896317 89896549 + 9.31 0.000 intron (NM_014972, intron 9 of 17) AluJr|SINE|Alu -21446 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr14-441 chr14 81431658 81431890 + 9.31 0.000 intron (NM_001366850, intron 1 of 7) AluSq|SINE|Alu -3999 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr4-397 chr4 169347039 169347271 + 9.31 0.000 Intergenic Intergenic -76199 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr22-321 chr22 10722834 10723066 + 9.11 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 238579 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr12-231 chr12 120246738 120246970 + 9.11 0.000 intron (NM_002859, intron 1 of 10) AluSc8|SINE|Alu 3309 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr1-1512 chr1 180674445 180674677 + 9.11 0.000 intron (NR_137330, intron 1 of 12) intron (NR_137330, intron 1 of 12) 42539 NM_001135669 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr17-831 chr17 66935544 66935776 + 9.11 0.000 Intergenic AluJr|SINE|Alu -29047 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr7-767 chr7 82079452 82079684 + 9.11 0.000 intron (NM_000722, intron 7 of 38) AluSx|SINE|Alu 70391 NR_110077 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr1-914 chr1 45782186 45782418 + 9.11 0.000 Intergenic AluY|SINE|Alu -21305 NM_001324320 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr12-261 chr12 107318180 107318412 + 9.11 0.000 promoter-TSS (NM_001347943) promoter-TSS (NM_001347943) -138 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr22-262 chr22 20545358 20545590 + 9.11 0.000 intron (NM_001003891, intron 2 of 17) AluSz|SINE|Alu 37427 NM_001293237 51586 Hs.517421 NM_015889 ENSG00000099917 MED15 ARC105|CAG7A|CTG7A|PCQAP|TIG-1|TIG1|TNRC7 mediator complex subunit 15 protein-coding chr1-937 chr1 69107754 69107986 + 9.11 0.000 intron (NR_146608, intron 3 of 4) AluY|SINE|Alu 51972 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA chr17-733 chr17 16431912 16432144 + 9.11 0.000 exon (NM_016113, exon 12 of 15) exon (NM_016113, exon 12 of 15) -6959 NR_027173 125144 Hs.368934 NM_152350 ENSG00000175061 SNHG29 C17orf45|C17orf76-AS1|FAM211A-AS1|LRRC75A-AS1|NCRNA00188|TSAP19 small nucleolar RNA host gene 29 ncRNA chr4-259 chr4 92318466 92318698 + 9.11 0.000 intron (NM_001286838, intron 1 of 14) AluJb|SINE|Alu 14183 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr6-362 chr6 94534137 94534369 + 9.11 0.000 Intergenic MER4A|LTR|ERV1 815950 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA chr13-130 chr13 107786311 107786543 + 9.11 0.000 TTS (NR_046848) TTS (NR_046848) 49031 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA chr8-499 chr8 60639782 60640014 + 9.11 0.000 Intergenic L1MC1|LINE|L1 -38842 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr11-630 chr11 83069941 83070173 + 9.11 0.000 intron (NM_014488, intron 1 of 5) intron (NM_014488, intron 1 of 5) 1405 NM_001286061 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr1-1071 chr1 7075528 7075760 + 9.11 0.000 intron (NM_001349608, intron 2 of 21) intron (NM_001349608, intron 2 of 21) 290190 NM_001349612 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr2-741 chr2 238752176 238752408 + 9.11 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 95615 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr7-801 chr7 107908585 107908817 + 9.11 0.000 intron (NM_001289752, intron 7 of 12) L2c|LINE|L2 17518 NM_000108 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr8-405 chr8 95958984 95959216 + 9.11 0.000 Intergenic AluJb|SINE|Alu -10752 NR_036611 100500773 Hs.741582 NR_036611 LOC100500773 - serine and arginine rich splicing factor 3 pseudogene pseudo chr6-93 chr6 137267252 137267484 + 9.11 0.000 Intergenic L1MC5a|LINE|L1 -47938 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr16-459 chr16 71533964 71534196 + 9.11 0.000 intron (NM_001166395, intron 1 of 1) LTR107_Mam|LTR|LTR 7654 NM_001166395 10164 Hs.251383 NM_005769 ENSG00000140835 CHST4 GST3|GlcNAc6ST2|HECGLCNAC6ST|LSST carbohydrate sulfotransferase 4 protein-coding chr1-1003 chr1 182480225 182480457 + 9.11 0.000 intron (NM_001366934, intron 7 of 22) AluJr4|SINE|Alu 30195 NM_001366934 353299 Hs.121200 NM_032267 ENSG00000121446 RGSL1 RGSL|RGSL2 regulator of G protein signaling like 1 protein-coding chr5-259 chr5 173936896 173937128 + 9.11 0.000 intron (NM_001308192, intron 3 of 8) AluSx1|SINE|Alu 43961 NM_001308193 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr11-384 chr11 34362944 34363176 + 9.11 0.000 Intergenic AluSp|SINE|Alu -5050 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr14-383 chr14 33692617 33692849 + 9.11 0.000 intron (NM_001165893, intron 5 of 10) intron (NM_001165893, intron 5 of 10) -16204 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA chr2-797 chr2 101060997 101061229 + 9.11 0.000 intron (NM_001102426, intron 2 of 19) AluSx1|SINE|Alu 58824 NM_000993 6160 Hs.469473 NM_000993 ENSG00000071082 RPL31 L31 ribosomal protein L31 protein-coding chr5-390 chr5 54311481 54311713 + 9.11 0.000 Intergenic Intergenic -1024 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr13-174 chr13 41988907 41989139 + 9.11 0.000 Intergenic L3|LINE|CR1 27854 NR_039974 100507240 Hs.147766 NR_039974 ENSG00000278338 VWA8-AS1 - VWA8 antisense RNA 1 (head to head) ncRNA chr1-1274 chr1 19499911 19500143 + 9.11 0.000 Intergenic AluJo|SINE|Alu -14488 NM_004930 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr10-625 chr10 22830734 22830966 + 9.11 0.000 Intergenic AluSx1|SINE|Alu -97174 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding chr1-1235 chr1 9131114 9131346 + 9.11 0.000 Intergenic AluJr|SINE|Alu -2128 NM_024980 80045 Hs.632367 NM_024980 ENSG00000180758 GPR157 - G protein-coupled receptor 157 protein-coding KI270730.1-2 KI270730.1 109852 110084 + 9.11 0.000 NA NA NA NA chr4-678 chr4 183661239 183661471 + 9.11 0.000 intron (NM_199053, intron 1 of 30) intron (NM_199053, intron 1 of 30) 2062 NM_021942 60684 Hs.443240 NM_021942 ENSG00000168538 TRAPPC11 C4orf41|FOIGR|GRY|LGMD2S|LGMDR18 trafficking protein particle complex 11 protein-coding chr6-311 chr6 392982 393214 + 9.11 0.000 non-coding (NR_046000, exon 2 of 10) non-coding (NR_046000, exon 2 of 10) 1346 NR_046000 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr8-560 chr8 122566243 122566475 + 9.11 0.000 intron (NR_131202, intron 2 of 3) MLT1H1|LTR|ERVL-MaLR 2285 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA chr7-262 chr7 6376059 6376291 + 9.11 0.000 intron (NM_006908, intron 1 of 5) intron (NM_006908, intron 1 of 5) 1648 NM_006908 5879 Hs.413812 NM_006908 ENSG00000136238 RAC1 MIG5|MRD48|Rac-1|TC-25|p21-Rac1 Rac family small GTPase 1 protein-coding chrX-147 chrX 120572347 120572579 + 9.11 0.000 intron (NM_003588, intron 2 of 21) AluSq2|SINE|Alu 3366 NM_003588 8450 Hs.102914 NM_003588 ENSG00000158290 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding chr20-67 chr20 13658028 13658260 + 9.11 0.000 Intergenic AluSx1|SINE|Alu -19208 NR_136628 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding chr18-78 chr18 79435204 79435436 + 9.11 0.000 intron (NM_001278672, intron 3 of 8) intron (NM_001278672, intron 3 of 8) 35021 NM_001278672 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr13-310 chr13 71496044 71496276 + 9.11 0.000 intron (NM_004392, intron 2 of 6) AluSz6|SINE|Alu 371032 NM_004392 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr17-541 chr17 28566187 28566419 + 9.11 0.000 intron (NM_033198, intron 3 of 11) AluSz|SINE|Alu 5221 NM_033198 94005 Hs.462550 NM_033198 ENSG00000087111 PIGS GPIBD18 phosphatidylinositol glycan anchor biosynthesis class S protein-coding chr22-254 chr22 50486663 50486895 + 9.11 0.000 promoter-TSS (NM_017584) promoter-TSS (NM_017584) -80 NM_017584 55586 Hs.129227 NM_017584 ENSG00000100253 MIOX ALDRL6 myo-inositol oxygenase protein-coding chr1-1240 chr1 9688085 9688317 + 9.11 0.000 promoter-TSS (NR_126366) promoter-TSS (NR_126366) -627 NR_126366 101929074 Hs.661762 NR_126366 ENSG00000231789 PIK3CD-AS2 - PIK3CD antisense RNA 2 ncRNA chr3-243 chr3 45303386 45303618 + 9.11 0.000 Intergenic AluSc8|SINE|Alu -77215 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr16-204 chr16 11630440 11630672 + 9.11 0.000 Intergenic Intergenic -37899 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr19-387 chr19 16697852 16698084 + 9.11 0.000 Intergenic L1ME1|LINE|L1 -21879 NM_001007525 284434 Hs.406014 NM_001007525 ENSG00000188039 NWD1 - NACHT and WD repeat domain containing 1 protein-coding chr10-788 chr10 111125556 111125788 + 9.11 0.000 Intergenic Intergenic 11381 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA chr17-325 chr17 68074629 68074861 + 9.11 0.000 Intergenic MER33|DNA|hAT-Charlie -26810 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr9-366 chr9 110048560 110048792 + 9.11 0.000 promoter-TSS (NM_001198656) promoter-TSS (NM_001198656) 78 NM_001004065 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr4-663 chr4 164992592 164992824 + 8.92 0.000 Intergenic AluSz|SINE|Alu -15051 NM_001012414 391712 Hs.654633 NM_001012414 ENSG00000183439 TRIM61 RNF35 tripartite motif containing 61 protein-coding chr8-341 chr8 103371437 103371669 + 8.92 0.000 promoter-TSS (NM_001256099) promoter-TSS (NM_001256099) 15 NM_138455 115908 Hs.405614 NM_138455 ENSG00000164932 CTHRC1 - collagen triple helix repeat containing 1 protein-coding chr22-355 chr22 50620406 50620638 + 8.92 0.000 Intergenic AluSp|SINE|Alu 7630 NM_001085425 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr1-747 chr1 39095421 39095653 + 8.92 0.000 intron (NM_012090, intron 1 of 92) AluSc|SINE|Alu 11370 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr10-549 chr10 69965968 69966200 + 8.92 0.000 Intergenic Intergenic -86762 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr17-720 chr17 5299545 5299777 + 8.92 0.000 intron (NM_001291581, intron 1 of 16) intron (NM_001291581, intron 1 of 16) 17377 NM_001083585 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr9-751 chr9 136599765 136599997 + 8.92 0.000 Intergenic Intergenic 17300 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr10-386 chr10 72692364 72692596 + 8.92 0.000 promoter-TSS (NM_001270680) promoter-TSS (NM_001270680) -139 NM_001270680 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr21-78 chr21 24645698 24645930 + 8.92 0.000 Intergenic L1PB4|LINE|L1 -194736 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA chr1-229 chr1 201339493 201339725 + 8.92 0.000 Intergenic AluSq|SINE|Alu 38071 NM_000364 7139 Hs.533613 NM_000364 ENSG00000118194 TNNT2 CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT troponin T2, cardiac type protein-coding chr16-617 chr16 52698884 52699116 + 8.92 0.000 Intergenic MER30|DNA|hAT-Charlie -92025 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr16-434 chr16 47077227 47077459 + 8.92 0.000 TTS (NM_018092) TTS (NM_018092) 66602 NM_001201477 81831 Hs.645802 NM_018092 ENSG00000171208 NETO2 BTCL2|NEOT2 neuropilin and tolloid like 2 protein-coding chr4-660 chr4 159358730 159358962 + 8.92 0.000 3' UTR (NM_014247, exon 24 of 24) 3' UTR (NM_014247, exon 24 of 24) 91037 NM_014247 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr17-565 chr17 49909006 49909238 + 8.92 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -60068 NM_138281 1748 Hs.591167 NM_001934 ENSG00000108813 DLX4 BP1|DLX7|DLX8|DLX9|OFC15 distal-less homeobox 4 protein-coding chr7-628 chr7 155368767 155368999 + 8.92 0.000 promoter-TSS (NR_103545) promoter-TSS (NR_103545) -950 NR_103545 338436 Hs.521326 NR_103545 ENSG00000204960 BLACE - B cell acute lymphoblastic leukemia expressed ncRNA chr19-547 chr19 694143 694375 + 8.92 0.000 intron (NM_001308209, intron 2 of 4) intron (NM_001308209, intron 2 of 4) 1193 NM_214710 400668 Hs.245146 NM_214710 ENSG00000185198 PRSS57 NSP4|PRSSL1|UNQ782 serine protease 57 protein-coding chr7-402 chr7 143306481 143306713 + 8.92 0.000 3' UTR (NM_001224, exon 12 of 12) 3' UTR (NM_001224, exon 12 of 12) -9514 NR_046453 1180 Hs.121483 NM_000083 ENSG00000188037 CLCN1 CLC1 chloride voltage-gated channel 1 protein-coding chr11-535 chr11 133326386 133326618 + 8.92 0.000 intron (NM_001012393, intron 1 of 7) (GT)n|Simple_repeat|Simple_repeat 205999 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr14-487 chr14 104782536 104782768 + 8.92 0.000 intron (NM_001014431, intron 2 of 13) intron (NM_001014431, intron 2 of 13) 10949 NM_005163 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr8-500 chr8 63555287 63555519 + 8.92 0.000 Intergenic Intergenic 89554 NR_125825 102724612 Hs.97639 NR_125825 ENSG00000253894 LOC102724612 - uncharacterized LOC102724612 ncRNA chr8-315 chr8 62100872 62101104 + 8.92 0.000 Intergenic AluSx1|SINE|Alu -147866 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding chr4-556 chr4 60646585 60646817 + 8.92 0.000 Intergenic Intergenic -275918 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr5-294 chr5 138768443 138768675 + 8.92 0.000 intron (NM_001323982, intron 2 of 18) FAM|SINE|Alu -14635 NR_134244 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr18-201 chr18 24374392 24374624 + 8.92 0.000 intron (NM_080597, intron 2 of 27) intron (NM_080597, intron 2 of 27) 23316 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr8-265 chr8 70861416 70861648 + 8.92 0.000 Intergenic AluJo|SINE|Alu 192193 NM_001287259 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr5-462 chr5 159147778 159148010 + 8.92 0.000 Intergenic AluSq|SINE|Alu 47411 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr17-636 chr17 28862267 28862499 + 8.92 0.000 promoter-TSS (NR_039885) promoter-TSS (NR_039885) -653 NR_039885 100616385 NR_039885 ENSG00000284085 MIR4732 mir-4732 microRNA 4732 ncRNA chr21-114 chr21 37398828 37399060 + 8.92 0.000 intron (NM_001347723, intron 1 of 10) intron (NM_001347723, intron 1 of 10) -19961 NM_130436 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr3-932 chr3 196968909 196969141 + 8.92 0.000 promoter-TSS (NM_025163) promoter-TSS (NM_025163) -192 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr13-200 chr13 105072736 105072968 + 8.92 0.000 Intergenic Intergenic -393015 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr15-181 chr15 65022564 65022796 + 8.92 0.000 intron (NM_139242, intron 3 of 8) L1MC5a|LINE|L1 6959 NM_139242 123263 Hs.531615 NM_139242 ENSG00000103707 MTFMT COXPD15|FMT1|MC1DN27 mitochondrial methionyl-tRNA formyltransferase protein-coding chr4-602 chr4 108718702 108718934 + 8.92 0.000 Intergenic AluSx|SINE|Alu 44235 NM_031279 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr2-782 chr2 75715408 75715640 + 8.92 0.000 Intergenic Intergenic -4609 NM_003203 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr1-1332 chr1 39505932 39506164 + 8.92 0.000 intron (NM_181809, intron 1 of 6) L1MC4a|LINE|L1 -8818 NR_132962 192217 Hs.472491 NR_132962 ENSG00000237624 OXCT2P1 OXCT2P 3-oxoacid CoA-transferase 2 pseudogene 1 pseudo chr12-557 chr12 232524 232756 + 8.92 0.000 intron (NM_001190997, intron 5 of 12) intron (NM_001190997, intron 5 of 12) -18483 NM_001206931 6539 Hs.437174 NM_003044 ENSG00000111181 SLC6A12 BGT-1|BGT1|GAT2 solute carrier family 6 member 12 protein-coding chr11-934 chr11 94255949 94256181 + 8.92 0.000 Intergenic Intergenic -49572 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr22-331 chr22 29261992 29262224 + 8.92 0.000 intron (NR_138044, intron 3 of 6) L1M4|LINE|L1 5873 NR_138044 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr17-276 chr17 50166637 50166869 + 8.92 0.000 intron (NR_135553, intron 1 of 8) (CA)n|Simple_repeat|Simple_repeat 748 NM_000023 6442 Hs.463412 NM_000023 ENSG00000108823 SGCA 50DAG|ADL|DAG2|DMDA2|LGMD2D|LGMDR3|SCARMD1|adhalin sarcoglycan alpha protein-coding chr6-306 chr6 163117729 163117961 + 8.72 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) -63684 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA chr14-494 chr14 105215527 105215759 + 8.72 0.000 intron (NM_001242788, intron 14 of 16) (CA)n|Simple_repeat|Simple_repeat 32242 NM_145685 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr16-520 chr16 66384162 66384394 + 8.72 0.000 intron (NM_001795, intron 2 of 11) AluSz|SINE|Alu 17587 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr2-946 chr2 48290678 48290910 + 8.72 0.000 Intergenic L1ME3B|LINE|L1 -23888 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr4-615 chr4 123443562 123443794 + 8.72 0.000 Intergenic Intergenic 44138 NM_005841 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr20-272 chr20 36720609 36720841 + 8.72 0.000 intron (NM_032013, intron 2 of 15) intron (NM_032013, intron 2 of 15) 25365 NM_032013 57446 Hs.437338 NM_022477 ENSG00000101079 NDRG3 - NDRG family member 3 protein-coding chr8-401 chr8 71327640 71327872 + 8.72 0.000 intron (NM_001370336, intron 5 of 17) intron (NM_001370336, intron 5 of 17) 28950 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr1-1169 chr1 177587173 177587405 + 8.72 0.000 Intergenic Intergenic -113235 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr4-442 chr4 77647681 77647913 + 8.72 0.000 Intergenic L1MA1|LINE|L1 136044 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr17-824 chr17 62683310 62683542 + 8.72 0.000 intron (NM_006039, intron 20 of 29) AluSp|SINE|Alu -22780 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr12-413 chr12 48081468 48081700 + 8.72 0.000 intron (NR_051992, intron 7 of 18) AluJr|SINE|Alu -23669 NM_001354747 5213 Hs.75160 NM_000289 ENSG00000152556 PFKM ATP-PFK|GSD7|PFK-1|PFK-A|PFK1|PFKA|PFKX|PPP1R122 phosphofructokinase, muscle protein-coding chr15-399 chr15 57225011 57225243 + 8.72 0.000 intron (NM_207040, intron 1 of 12) intron (NM_207040, intron 1 of 12) 5697 NM_207040 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding chr4-542 chr4 40223310 40223542 + 8.72 0.000 intron (NM_001278360, intron 2 of 3) Tigger1|DNA|TcMar-Tigger 26395 NM_004310 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chrX-138 chrX 99653961 99654193 + 8.72 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 756196 NM_001184880 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr10-655 chr10 43203732 43203964 + 8.72 0.000 intron (NM_145313, intron 2 of 12) intron (NM_145313, intron 2 of 12) 25891 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr5-705 chr5 142142924 142143156 + 8.72 0.000 intron (NM_030571, intron 6 of 7) intron (NM_030571, intron 6 of 7) 34261 NM_030571 80762 Hs.9788 NM_030571 ENSG00000131507 NDFIP1 N4WBP5 Nedd4 family interacting protein 1 protein-coding chr16-79 chr16 34063805 34064037 + 8.72 0.000 Intergenic Intergenic -99657 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr10-622 chr10 21066852 21067084 + 8.72 0.000 intron (NM_001173484, intron 2 of 6) intron (NM_001173484, intron 2 of 6) -107022 NR_046283 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA chr20-253 chr20 3882102 3882334 + 8.72 0.000 Intergenic AluSx|SINE|Alu -6563 NM_024960 80025 Hs.114180 NM_024960 ENSG00000125779 PANK2 C20orf48|HARP|HSS|NBIA1|PKAN pantothenate kinase 2 protein-coding chr20-134 chr20 31073482 31073714 + 8.72 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -184066 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr12-712 chr12 110300239 110300471 + 8.72 0.000 intron (NM_170665, intron 5 of 19) AluY|SINE|Alu 19108 NM_170665 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chrX-130 chrX 74580366 74580598 + 8.72 0.000 Intergenic AluSx|SINE|Alu 34142 NM_016120 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr16-622 chr16 57098458 57098690 + 8.72 0.000 intron (NM_152727, intron 1 of 15) L3|LINE|CR1 5991 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr9-754 chr9 137417896 137418128 + 8.72 0.000 intron (NM_001286823, intron 1 of 7) intron (NM_001286823, intron 1 of 7) 5150 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr10-470 chr10 86948087 86948319 + 8.72 0.000 intron (NM_024756, intron 1 of 6) AluJo|SINE|Alu -7556 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr1-776 chr1 104398810 104399042 + 8.72 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 325903 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo chr20-166 chr20 28898021 28898253 + 8.72 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat -182253 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr20-171 chr20 32397116 32397348 + 8.72 0.000 intron (NM_015338, intron 3 of 11) AluSx3|SINE|Alu 38167 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr17-678 chr17 76838488 76838720 + 8.72 0.000 Intergenic Intergenic -17562 NR_135284 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA GL000194.1-1 GL000194.1 56201 56433 + 8.72 0.000 NA NA NA NA chr22-416 chr22 42685577 42685809 + 8.72 0.000 Intergenic AluSx1|SINE|Alu 35177 NR_146459 53947 Hs.105956 NM_017436 ENSG00000128274 A4GALT A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK alpha 1,4-galactosyltransferase (P blood group) protein-coding chr11-780 chr11 9977397 9977629 + 8.72 0.000 intron (NM_030962, intron 13 of 39) intron (NM_030962, intron 13 of 39) 138371 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr2-608 chr2 44928889 44929121 + 8.72 0.000 intron (NR_147195, intron 1 of 1) CpG 9883 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr6-592 chr6 127090986 127091218 + 8.72 0.000 Intergenic L1PA8|LINE|L1 -27569 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr5-501 chr5 65926345 65926577 + 8.72 0.000 promoter-TSS (NM_001253698) promoter-TSS (NM_001253698) -93 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr6-510 chr6 18864901 18865133 + 8.72 0.000 Intergenic Intergenic 293233 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chrX-163 chrX 20592937 20593169 + 8.72 0.000 Intergenic AluSc|SINE|Alu -326144 NM_004586 6197 Hs.445387 NM_004586 ENSG00000177189 RPS6KA3 CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2 ribosomal protein S6 kinase A3 protein-coding chr3-644 chr3 73012724 73012956 + 8.72 0.000 intron (NM_001318025, intron 2 of 7) intron (NM_001318025, intron 2 of 7) 16029 NM_001318025 151987 Hs.431092 NM_174907 ENSG00000163605 PPP4R2 PP4R2 protein phosphatase 4 regulatory subunit 2 protein-coding chr9-355 chr9 69155046 69155278 + 8.72 0.000 intron (NM_001369870, intron 2 of 23) AluSx1|SINE|Alu -18893 NM_201629 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr5-585 chr5 32568425 32568657 + 8.72 0.000 Intergenic AluSc5|SINE|Alu -17016 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr11-974 chr11 122666831 122667063 + 8.52 0.000 intron (NM_001363365, intron 1 of 13) intron (NM_001363365, intron 1 of 13) 11225 NM_032873 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr6-283 chr6 80322147 80322379 + 8.52 0.000 intron (NR_134945, intron 10 of 10) AluSg|SINE|Alu 215592 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr12-657 chr12 61650771 61651003 + 8.52 0.000 Intergenic Intergenic 541952 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr5-533 chr5 149604621 149604853 + 8.52 0.000 intron (NM_001001669, intron 3 of 12) AluSz6|SINE|Alu 23239 NM_001001669 389337 Hs.256206 NM_001001669 ENSG00000183111 ARHGEF37 - Rho guanine nucleotide exchange factor 37 protein-coding chr16-372 chr16 72459299 72459531 + 8.52 0.000 intron (NR_159371, intron 3 of 5) AluY|SINE|Alu 205555 NR_159372 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr17-706 chr17 1860957 1861189 + 8.52 0.000 intron (NM_001355120, intron 5 of 16) L1MEc|LINE|L1 31068 NM_002945 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr5-355 chr5 154988138 154988370 + 8.52 0.000 Intergenic AluJb|SINE|Alu -25501 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding chr14-167 chr14 67926432 67926664 + 8.52 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 102956 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr2-887 chr2 12625825 12626057 + 8.52 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -90931 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr4-451 chr4 108498684 108498916 + 8.52 0.000 Intergenic AluJb|SINE|Alu -58433 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr4-452 chr4 109664332 109664564 + 8.52 0.000 intron (NM_017918, intron 4 of 7) AluJr|SINE|Alu 38997 NR_133012 839 Hs.654616 NM_001226 ENSG00000138794 CASP6 MCH2 caspase 6 protein-coding chr18-172 chr18 72394875 72395107 + 8.52 0.000 Intergenic AluSp|SINE|Alu 149351 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding chr3-643 chr3 71281885 71282117 + 8.52 0.000 intron (NR_146142, intron 5 of 19) AluSx1|SINE|Alu -7757 NR_126463 104502416 Hs.658538 NR_126463 ENSG00000244203 FOXP1-AS1 - FOXP1 antisense RNA 1 ncRNA chr15-320 chr15 56180613 56180845 + 8.52 0.000 intron (NM_001370561, intron 4 of 11) AluSx|SINE|Alu 9203 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding chr11-525 chr11 101726177 101726409 + 8.52 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -142286 NM_004621 7225 Hs.159003 NM_004621 ENSG00000137672 TRPC6 FSGS2|TRP6 transient receptor potential cation channel subfamily C member 6 protein-coding chr5-606 chr5 55392310 55392542 + 8.52 0.000 intron (NM_015360, intron 19 of 26) AluSz|SINE|Alu 84437 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding chr15-103 chr15 44260823 44261055 + 8.52 0.000 Intergenic L1ME3B|LINE|L1 -27780 NM_138423 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr8-298 chr8 34032675 34032907 + 8.52 0.000 Intergenic L2a|LINE|L2 -432685 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr8-295 chr8 25195308 25195540 + 8.52 0.000 intron (NM_024940, intron 1 of 51) L2b|LINE|L2 10735 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr12-506 chr12 45954608 45954840 + 8.52 0.000 intron (NM_004719, intron 3 of 14) AluJo|SINE|Alu 35850 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr15-476 chr15 93323971 93324203 + 8.52 0.000 Intergenic Intergenic 118021 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding chr20-294 chr20 63717231 63717463 + 8.52 0.000 intron (NM_181485, intron 2 of 6) (T)n|Simple_repeat|Simple_repeat 9319 NM_181485 84619 Hs.590868 NM_032527 ENSG00000197114 ZGPAT GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP zinc finger CCCH-type and G-patch domain containing protein-coding chr3-780 chr3 61041389 61041621 + 8.52 0.000 intron (NR_148922, intron 3 of 3) intron (NR_148922, intron 3 of 3) 209947 NM_001320900 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr2-466 chr2 106194234 106194466 + 8.52 0.000 promoter-TSS (NM_001253875) promoter-TSS (NM_001253875) -11 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr17-842 chr17 74251467 74251699 + 8.52 0.000 intron (NM_001330453, intron 10 of 13) L2|LINE|L2 3217 NM_052869 94015 Hs.27935 NM_032646 ENSG00000141540 TTYH2 C17orf29 tweety family member 2 protein-coding chr17-659 chr17 59465182 59465414 + 8.52 0.000 intron (NR_110813, intron 2 of 2) intron (NR_110813, intron 2 of 2) 61559 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA chr7-349 chr7 6624645 6624877 + 8.52 0.000 TTS (NM_017560) TTS (NM_017560) 9151 NM_017560 54753 Hs.592170 NM_017560 ENSG00000236609 ZNF853 - zinc finger protein 853 protein-coding chr10-58 chr10 41899695 41899927 + 8.52 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 468234 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr9-250 chr9 5695448 5695680 + 8.52 0.000 intron (NM_001206557, intron 3 of 24) intron (NM_001206557, intron 3 of 24) 66445 NM_001206557 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr14-359 chr14 77921285 77921517 + 8.52 0.000 intron (NM_001366487, intron 8 of 11) MIRc|SINE|MIR 121292 NR_158989 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr12-279 chr12 7029018 7029250 + 8.52 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -10658 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr6-302 chr6 157473935 157474167 + 8.52 0.000 intron (NM_024630, intron 1 of 8) AluSx1|SINE|Alu -55081 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr2-723 chr2 219648485 219648717 + 8.52 0.000 Intergenic Intergenic 20971 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr18-169 chr18 62693189 62693421 + 8.52 0.000 Intergenic AluSx1|SINE|Alu -22236 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr6-255 chr6 158819032 158819264 + 8.52 0.000 promoter-TSS (NM_003379) promoter-TSS (NM_003379) 220 NM_001111077 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr11-469 chr11 90961360 90961592 + 8.52 0.000 Intergenic L1MA7|LINE|L1 -92274 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr12-307 chr12 68173321 68173553 + 8.32 0.000 Intergenic AluSx3|SINE|Alu -13697 NM_000619 3458 Hs.856 NM_000619 ENSG00000111537 IFNG IFG|IFI interferon gamma protein-coding chr1-1085 chr1 15906266 15906498 + 8.32 0.000 intron (NM_015001, intron 3 of 14) intron (NM_015001, intron 3 of 14) -58235 NR_024279 729614 Hs.119298 NR_024279 ENSG00000179743 FLJ37453 - uncharacterized LOC729614 ncRNA chr1-1327 chr1 37966753 37966985 + 8.32 0.000 intron (NM_006802, intron 15 of 16) AluSp|SINE|Alu -19812 NR_158630 3633 Hs.449942 NM_005540 ENSG00000204084 INPP5B 5PTase inositol polyphosphate-5-phosphatase B protein-coding chrX-189 chrX 131806088 131806320 + 8.32 0.000 intron (NR_026975, intron 2 of 12) AluSx|SINE|Alu 24439 NR_152876 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA chr9-428 chr9 84306975 84307207 + 8.32 0.000 intron (NM_022127, intron 4 of 18) AluJb|SINE|Alu 33667 NR_037638 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr2-1018 chr2 114446933 114447165 + 8.32 0.000 intron (NM_001321910, intron 1 of 26) (T)n|Simple_repeat|Simple_repeat 4408 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr20-278 chr20 44259387 44259619 + 8.32 0.000 intron (NM_001256740, intron 3 of 3) AluSx|SINE|Alu 12195 NM_001256739 78997 Hs.517059 NM_024034 ENSG00000124194 GDAP1L1 dJ881L22.1|dJ995J12.1.1 ganglioside induced differentiation associated protein 1 like 1 protein-coding chr3-624 chr3 47482139 47482371 + 8.32 0.000 Intergenic MIRc|SINE|MIR -6314 NM_012235 22937 Hs.531789 NM_012235 ENSG00000114650 SCAP - SREBF chaperone protein-coding chr3-218 chr3 57684026 57684258 + 8.32 0.000 intron (NM_152678, intron 1 of 19) AluSg7|SINE|Alu 8935 NM_152678 201627 Hs.91085 NM_152678 ENSG00000174839 DENND6A AFI1A|FAM116A DENN domain containing 6A protein-coding chr18-242 chr18 71226740 71226972 + 8.32 0.000 Intergenic Intergenic 352100 NR_038326 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA chr2-1093 chr2 199338240 199338472 + 8.32 0.000 intron (NM_001172509, intron 7 of 10) AluSz|SINE|Alu 119583 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding chr12-743 chr12 124344568 124344800 + 8.32 0.000 exon (NM_001206654, exon 33 of 48) exon (NM_001206654, exon 33 of 48) -7442 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr12-547 chr12 123807680 123807912 + 8.32 0.000 intron (NM_207437, intron 17 of 77) intron (NM_207437, intron 17 of 77) 45301 NM_207437 196385 Hs.622654 NM_207437 ENSG00000197653 DNAH10 - dynein axonemal heavy chain 10 protein-coding chr9-507 chr9 8480945 8481177 + 8.32 0.000 intron (NM_130392, intron 14 of 30) AluY|SINE|Alu 252885 NM_130392 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr19-847 chr19 44791558 44791790 + 8.32 0.000 intron (NM_012116, intron 6 of 10) AluSz|SINE|Alu 13784 NM_012116 23624 Hs.466907 NM_012116 ENSG00000142273 CBLC CBL-3|CBL-SL|RNF57 Cbl proto-oncogene C protein-coding chr17-517 chr17 7851569 7851801 + 8.32 0.000 exon (NM_001348716, exon 17 of 23) exon (NM_001348716, exon 17 of 23) -3381 NM_001319941 92162 Hs.389669 NM_203411 ENSG00000167874 TMEM88 - transmembrane protein 88 protein-coding chr6-169 chr6 134224903 134225135 + 8.32 0.000 intron (NM_001143676, intron 2 of 13) AluSc8|SINE|Alu -47158 NM_001143677 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr1-788 chr1 161027588 161027820 + 8.32 0.000 Intergenic AluSg|SINE|Alu -6552 NM_016946 50848 Hs.517293 NM_016946 ENSG00000158769 F11R CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 F11 receptor protein-coding chrX-96 chrX 54454555 54454787 + 8.32 0.000 intron (NM_004463, intron 12 of 17) Tigger3a|DNA|TcMar-Tigger 14267 NM_058163 90121 Hs.522662 NM_058163 ENSG00000158526 TSR2 DBA14|DT1P1A10|WGG1 TSR2 ribosome maturation factor protein-coding chr11-949 chr11 110127941 110128173 + 8.32 0.000 intron (NM_033390, intron 1 of 5) intron (NM_033390, intron 1 of 5) 34665 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr3-805 chr3 86330050 86330282 + 8.32 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -151777 NR_135563 101927494 Hs.385622 NR_135563 ENSG00000241328 LINC02070 - long intergenic non-protein coding RNA 2070 ncRNA chr15-231 chr15 98689057 98689289 + 8.32 0.000 intron (NM_000875, intron 1 of 20) (TTGG)n|Simple_repeat|Simple_repeat -37952 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr14-434 chr14 76057893 76058125 + 8.32 0.000 intron (NR_045664, intron 3 of 7) MER5A|DNA|hAT-Charlie 72246 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding chr19-428 chr19 4673174 4673406 + 8.32 0.000 Intergenic AluJb|SINE|Alu -2887 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr9-539 chr9 123653809 123654041 + 8.32 0.000 intron (NM_001352968, intron 7 of 18) MIRb|SINE|MIR -168303 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chrX-113 chrX 40119086 40119318 + 8.32 0.000 intron (NM_001123384, intron 1 of 13) L1ME3A|LINE|L1 -21244 NM_017745 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr10-725 chr10 86857669 86857901 + 8.32 0.000 intron (NM_004329, intron 2 of 12) MLT1F1|LTR|ERVL-MaLR -97974 NM_001330120 6623 Hs.349470 NM_003087 ENSG00000173267 SNCG BCSG1|SR synuclein gamma protein-coding chr7-787 chr7 100609626 100609858 + 8.32 0.000 Intergenic AluSx3|SINE|Alu -2420 NM_001040097 64598 Hs.521086 NM_023948 ENSG00000106330 MOSPD3 CDS3|NET30 motile sperm domain containing 3 protein-coding chr7-865 chr7 151167178 151167410 + 8.32 0.000 exon (NM_001098834, exon 1 of 2) exon (NM_001098834, exon 1 of 2) 254 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr7-870 chr7 152558383 152558615 + 8.32 0.000 Intergenic Intergenic 94375 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr16-610 chr16 31908989 31909221 + 8.32 0.000 intron (NR_049749, intron 4 of 4) L1M1|LINE|L1 35298 NM_003414 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding chr3-755 chr3 46868392 46868624 + 8.32 0.000 Intergenic Intergenic -5025 NM_000258 4634 Hs.517939 NM_000258 ENSG00000160808 MYL3 CMH8|MLC-lV/sb|MLC1SB|MLC1V|VLC1|VLCl myosin light chain 3 protein-coding chr1-1077 chr1 10586491 10586723 + 8.32 0.000 intron (NM_004565, intron 3 of 8) L1ME3B|LINE|L1 111657 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr19-682 chr19 9086212 9086444 + 8.32 0.000 Intergenic Intergenic -6917 NM_001004456 125963 Hs.553577 NM_001004456 ENSG00000170929 OR1M1 OR19-5|OR19-6 olfactory receptor family 1 subfamily M member 1 protein-coding chr19-864 chr19 48743273 48743505 + 8.32 0.000 intron (NM_182575, intron 6 of 9) intron (NM_182575, intron 6 of 9) 2543 NM_001321865 284359 Hs.400688 NM_182575 ENSG00000182264 IZUMO1 IZUMO|OBF izumo sperm-egg fusion 1 protein-coding chr1-775 chr1 100960782 100961014 + 8.32 0.000 intron (NM_133496, intron 8 of 10) intron (NM_133496, intron 8 of 10) 64808 NM_001144884 148867 Hs.533903 NM_133496 ENSG00000162695 SLC30A7 ZNT7|ZnT-7|ZnTL2 solute carrier family 30 member 7 protein-coding chr2-1115 chr2 213556130 213556362 + 8.32 0.000 intron (NR_047660, intron 9 of 14) L1M1|LINE|L1 -201821 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr14-317 chr14 99945126 99945358 + 8.32 0.000 Intergenic AluSq|SINE|Alu -26180 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr9-430 chr9 86081022 86081254 + 8.32 0.000 intron (NM_177937, intron 1 of 9) AluJr|SINE|Alu 18420 NM_016548 51280 Hs.494337 NM_016548 ENSG00000135052 GOLM1 C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 golgi membrane protein 1 protein-coding chr4-653 chr4 152387582 152387814 + 8.32 0.000 intron (NM_033632, intron 2 of 11) intron (NM_033632, intron 2 of 11) -5169 NM_001013415 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr7-778 chr7 98286439 98286671 + 8.32 0.000 intron (NM_001159491, intron 2 of 2) intron (NM_001159491, intron 2 of 2) 4869 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chrX-188 chrX 126698787 126699019 + 8.32 0.000 Intergenic L1M4a2|LINE|L1 -120826 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr14-373 chr14 105464057 105464289 + 8.32 0.000 intron (NM_001203258, intron 13 of 20) CpG-7813 -8772 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr16-466 chr16 79371863 79372095 + 8.32 0.000 Intergenic MIR|SINE|MIR 228758 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr9-712 chr9 131861704 131861936 + 8.32 0.000 intron (NM_001253881, intron 6 of 6) AluJr4|SINE|Alu -121876 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr3-618 chr3 32249341 32249573 + 8.32 0.000 intron (NM_001320308, intron 1 of 2) L1MB7|LINE|L1 10777 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr20-304 chr20 3141956 3142188 + 8.32 0.000 intron (NR_038395, intron 6 of 6) AluJb|SINE|Alu 17793 NM_014948 22888 Hs.654646 NM_014948 ENSG00000185019 UBOX5 RNF37|UBCE7IP5|UIP5|hUIP5 U-box domain containing 5 protein-coding chr2-225 chr2 64953085 64953317 + 8.32 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -20754 NR_036586 400958 Hs.591565 NR_036586 LINC02245 - long intergenic non-protein coding RNA 2245 ncRNA chr8-478 chr8 36812278 36812510 + 8.32 0.000 intron (NM_001031836, intron 7 of 26) AluSx1|SINE|Alu 28020 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr5-185 chr5 104662618 104662850 + 8.32 0.000 Intergenic AluSg|SINE|Alu -436740 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr2-960 chr2 62474604 62474836 + 8.32 0.000 Intergenic Intergenic 31475 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr2-642 chr2 88511228 88511460 + 8.32 0.000 Intergenic Intergenic -13305 NM_152670 200523 Hs.132104 NM_152670 ENSG00000172073 TEX37 C2orf51|TSC21 testis expressed 37 protein-coding chr13-227 chr13 56856472 56856704 + 8.32 0.000 Intergenic L1PA8|LINE|L1 -284330 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr19-879 chr19 53815069 53815301 + 8.32 0.000 intron (NM_144687, intron 1 of 9) intron (NM_144687, intron 1 of 9) 9218 NM_001277126 91662 Hs.631573 NM_033297 ENSG00000142405 NLRP12 CLR19.3|FCAS2|NALP12|PAN6|PYPAF7|RNO|RNO2 NLR family pyrin domain containing 12 protein-coding chr7-486 chr7 54487546 54487778 + 8.32 0.000 Intergenic Intergenic -54663 NM_182546 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding chr8-540 chr8 103630411 103630643 + 8.32 0.000 intron (NM_001348497, intron 1 of 22) AluSq2|SINE|Alu -128617 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr2-1050 chr2 167508117 167508349 + 8.12 0.000 Intergenic Intergenic -310439 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding chr12-667 chr12 76066037 76066269 + 8.12 0.000 intron (NM_001330232, intron 2 of 13) intron (NM_001330232, intron 2 of 13) 18532 NM_139207 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr20-280 chr20 45827330 45827562 + 8.12 0.000 promoter-TSS (NM_003279) promoter-TSS (NM_003279) -134 NM_003279 7125 Hs.182421 NM_003279 ENSG00000101470 TNNC2 - troponin C2, fast skeletal type protein-coding chr8-280 chr8 3197347 3197579 + 8.12 0.000 intron (NM_033225, intron 33 of 69) AluYm1|SINE|Alu -469012 NR_125425 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA chr5-555 chr5 493786 494018 + 8.12 0.000 intron (NM_001284351, intron 1 of 16) intron (NM_001284351, intron 1 of 16) 20666 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr19-719 chr19 46573415 46573647 + 8.12 0.000 intron (NM_001370550, intron 1 of 2) AluSq2|SINE|Alu 27385 NM_001370550 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding chr11-670 chr11 8698110 8698342 + 8.12 0.000 intron (NM_005418, intron 19 of 22) intron (NM_005418, intron 19 of 22) 12787 NR_002977 677826 Hs.745552 NR_002977 ENSG00000212607 SNORA3B ACA3-2|SNORA45|SNORA45B small nucleolar RNA, H/ACA box 3B snoRNA chr10-428 chr10 29613087 29613319 + 8.12 0.000 intron (NM_001323599, intron 3 of 38) intron (NM_001323599, intron 3 of 38) -10857 NR_030634 100126327 NR_030634 ENSG00000216035 MIR938 MIRN938|hsa-mir-938 microRNA 938 ncRNA chr4-308 chr4 160960296 160960528 + 8.12 0.000 Intergenic MLT2B3|LTR|ERVL -1062321 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr15-332 chr15 74805710 74805942 + 8.12 0.000 Intergenic L2c|LINE|L2 -7009 NM_021819 79748 Hs.620644 NM_021819 ENSG00000140506 LMAN1L ERGIC-53L|ERGL lectin, mannose binding 1 like protein-coding chr3-580 chr3 183277375 183277607 + 8.12 0.000 intron (NM_015078, intron 14 of 29) intron (NM_015078, intron 14 of 29) 24238 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr18-233 chr18 59358422 59358654 + 8.12 0.000 intron (NM_005570, intron 1 of 12) intron (NM_005570, intron 1 of 12) 727 NM_005570 3998 Hs.465295 NM_005570 ENSG00000074695 LMAN1 ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58 lectin, mannose binding 1 protein-coding chr15-407 chr15 63036065 63036297 + 8.12 0.000 Intergenic Intergenic -6566 NM_001301244 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr19-683 chr19 11544561 11544793 + 8.12 0.000 intron (NM_001308341, intron 3 of 7) AluJo|SINE|Alu 5826 NM_001308341 1264 Hs.465929 NM_001299 ENSG00000130176 CNN1 HEL-S-14|SMCC|Sm-Calp calponin 1 protein-coding chr8-596 chr8 141872490 141872722 + 8.12 0.000 Intergenic Intergenic -86293 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr6-438 chr6 50712246 50712478 + 8.12 0.000 Intergenic Intergenic -1182 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding chr3-621 chr3 42627146 42627378 + 8.12 0.000 intron (NM_001349126, intron 8 of 18) intron (NM_001349126, intron 8 of 18) -26184 NM_001201572 9117 Hs.445892 NM_004206 ENSG00000093183 SEC22C SEC22L3 SEC22 homolog C, vesicle trafficking protein protein-coding chr5-527 chr5 139621549 139621781 + 8.12 0.000 intron (NM_181838, intron 6 of 7) AluJr|SINE|Alu -25634 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr9-200 chr9 132882373 132882605 + 8.12 0.000 intron (NM_018956, intron 1 of 4) AluJb|SINE|Alu 3591 NM_018956 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr6-263 chr6 11916046 11916278 + 8.12 0.000 Intergenic Intergenic 85082 NR_125853 101928253 Hs.128163 NR_125853 LOC101928253 - uncharacterized LOC101928253 ncRNA chr1-1589 chr1 225888697 225888929 + 8.12 0.000 intron (NM_020997, intron 1 of 3) intron (NM_020997, intron 1 of 3) 333 NM_020997 10637 Hs.656214 NM_020997 ENSG00000243709 LEFTY1 LEFTB|LEFTYB left-right determination factor 1 protein-coding chr3-484 chr3 33718474 33718706 + 8.12 0.000 promoter-TSS (NM_001365633) promoter-TSS (NM_001365633) -336 NM_001365627 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr14-253 chr14 51837525 51837757 + 8.12 0.000 Intergenic AluSx|SINE|Alu -22971 NM_053064 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr17-660 chr17 61234574 61234806 + 8.12 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 133014 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr10-650 chr10 41865818 41866050 + 8.12 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 502111 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr3-395 chr3 165453058 165453290 + 8.12 0.000 intron (NR_125764, intron 3 of 5) (A)n|Simple_repeat|Simple_repeat 246214 NR_125764 103695433 Hs.570689 NR_125764 LINC01322 - long intergenic non-protein coding RNA 1322 ncRNA chr9-348 chr9 6770569 6770801 + 8.12 0.000 intron (NR_148680, intron 1 of 21) intron (NR_148680, intron 1 of 21) 13335 NR_148677 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr1-529 chr1 6691093 6691325 + 8.12 0.000 intron (NM_018198, intron 1 of 15) intron (NM_018198, intron 1 of 15) 10607 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr3-236 chr3 2820841 2821073 + 8.12 0.000 intron (NM_175607, intron 7 of 24) AluSx1|SINE|Alu -71258 NM_175613 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr12-333 chr12 132757909 132758141 + 8.12 0.000 intron (NM_015114, intron 1 of 12) MER58A|DNA|hAT-Charlie 3807 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr10-368 chr10 22765702 22765934 + 8.12 0.000 Intergenic Intergenic -51240 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr2-785 chr2 84815296 84815528 + 8.12 0.000 intron (NM_001370, intron 75 of 76) LTR84b|LTR|ERVL 65672 NM_001080824 129293 Hs.469134 NM_001080824 ENSG00000186854 TRABD2A C2orf89|TIKI1 TraB domain containing 2A protein-coding chr5-360 chr5 168535164 168535396 + 8.12 0.000 Intergenic Intergenic 5975 NM_001355274 345630 Hs.166262 NM_001355274 ENSG00000188573 FBLL1 - fibrillarin like 1 protein-coding chr10-534 chr10 21525631 21525863 + 8.12 0.000 promoter-TSS (NM_207371) promoter-TSS (NM_207371) -65 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr15-431 chr15 74136279 74136511 + 8.12 0.000 3' UTR (NM_020851, exon 3 of 3) 3' UTR (NM_020851, exon 3 of 3) 5809 NM_020851 57611 Hs.254775 NM_020851 ENSG00000167178 ISLR2 LINX immunoglobulin superfamily containing leucine rich repeat 2 protein-coding chr8-543 chr8 106858421 106858653 + 8.12 0.000 Intergenic Intergenic -88293 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr2-921 chr2 38673691 38673923 + 8.12 0.000 intron (NM_138801, intron 1 of 6) AluY|SINE|Alu 7693 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding chr7-741 chr7 63056397 63056629 + 8.12 0.000 Intergenic Intergenic 247543 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr5-633 chr5 76580092 76580324 + 8.12 0.000 intron (NM_006633, intron 5 of 35) AluSx1|SINE|Alu 28761 NR_134278 101929109 Hs.665172 NR_134278 ENSG00000249713 LOC101929109 - uncharacterized LOC101929109 ncRNA chr1-1152 chr1 150942325 150942557 + 8.12 0.000 intron (NM_001243491, intron 5 of 8) AluSc|SINE|Alu 16078 NM_001145415 9869 Hs.643565 NM_012432 ENSG00000143379 SETDB1 ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 SET domain bifurcated histone lysine methyltransferase 1 protein-coding chr11-932 chr11 93850069 93850301 + 7.93 0.000 intron (NM_001144871, intron 1 of 3) CpG 433 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr8-337 chr8 100970754 100970986 + 7.93 0.000 Intergenic AluY|SINE|Alu -17488 NM_003406 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr16-517 chr16 65498633 65498865 + 7.93 0.000 intron (NR_027755, intron 2 of 8) (T)n|Simple_repeat|Simple_repeat 77551 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr7-748 chr7 67450466 67450698 + 7.93 0.000 Intergenic AluJb|SINE|Alu 114606 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chrX-158 chrX 154137110 154137342 + 7.93 0.000 Intergenic Intergenic -7017 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr20-297 chr20 62435 62667 + 7.93 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -25121 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr1-1129 chr1 88997978 88998210 + 7.93 0.000 Intergenic L1M2|LINE|L1 -5134 NM_001349448 56267 Hs.481898 NM_001008661 ENSG00000137944 KYAT3 CCBL2|KAT3|KATIII kynurenine aminotransferase 3 protein-coding chr19-322 chr19 4648815 4649047 + 7.93 0.000 intron (NM_001167942, intron 1 of 1) AluSq|SINE|Alu 8914 NM_001167942 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr2-1091 chr2 197373266 197373498 + 7.93 0.000 Intergenic AluSz|SINE|Alu 61711 NM_012433 23451 Hs.632554 NM_012433 ENSG00000115524 SF3B1 Hsh155|MDS|PRP10|PRPF10|SAP155|SF3b155 splicing factor 3b subunit 1 protein-coding chr1-1182 chr1 204686597 204686829 + 7.93 0.000 promoter-TSS (NM_201630) promoter-TSS (NM_201630) -975 NM_201630 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding chr5-617 chr5 61734991 61735223 + 7.93 0.000 intron (NR_105000, intron 2 of 2) intron (NR_105000, intron 2 of 2) 591 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA chr2-1005 chr2 106198657 106198889 + 7.93 0.000 Intergenic Intergenic -4434 NM_001253875 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding chr13-151 chr13 95654050 95654282 + 7.93 0.000 Intergenic AluSx|SINE|Alu -9460 NM_198968 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr1-1053 chr1 237126128 237126360 + 7.93 0.000 intron (NM_001035, intron 1 of 104) AluSx1|SINE|Alu 84060 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding chr15-289 chr15 78370422 78370654 + 7.93 0.000 Intergenic Intergenic 30185 NM_004378 1381 Hs.346950 NM_004378 ENSG00000166426 CRABP1 CRABP|CRABP-I|CRABPI|RBP5 cellular retinoic acid binding protein 1 protein-coding chr18-82 chr18 10527104 10527336 + 7.93 0.000 intron (NM_003826, intron 1 of 11) intron (NM_003826, intron 1 of 11) 1193 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr9-513 chr9 18419602 18419834 + 7.93 0.000 Intergenic L1MD2|LINE|L1 -54435 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr12-709 chr12 109674887 109675119 + 7.93 0.000 Intergenic AluSx|SINE|Alu -38822 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chrX-279 chrX 127963216 127963448 + 7.93 0.000 Intergenic L1PB1|LINE|L1 89071 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding chr1-1337 chr1 40958553 40958785 + 7.93 0.000 Intergenic L1ME2|LINE|L1 -21027 NR_125440 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chr1-795 chr1 180467345 180467577 + 7.93 0.000 intron (NM_032360, intron 3 of 7) AluJo|SINE|Alu -29071 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr16-653 chr16 71613632 71613864 + 7.93 0.000 Intergenic AluSz|SINE|Alu -12436 NM_052858 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr5-353 chr5 147599943 147600175 + 7.93 0.000 intron (NR_038902, intron 3 of 3) intron (NR_038902, intron 3 of 3) 40065 NR_038902 153469 Hs.184323 NR_038902 ENSG00000280780 JAKMIP2-AS1 - JAKMIP2 antisense RNA 1 ncRNA chr12-187 chr12 101471657 101471889 + 7.93 0.000 Intergenic AluJo|SINE|Alu -3563 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr7-685 chr7 28734046 28734278 + 7.93 0.000 intron (NM_001011666, intron 3 of 6) intron (NM_001011666, intron 3 of 6) 48029 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr18-171 chr18 67197455 67197687 + 7.93 0.000 Intergenic FAM|SINE|Alu 115987 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA chr12-702 chr12 107573316 107573548 + 7.93 0.000 intron (NM_001018072, intron 3 of 16) (TGGA)n|Simple_repeat|Simple_repeat -7442 NM_001017523 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr11-717 chr11 82707402 82707634 + 7.93 0.000 Intergenic Intergenic 26346 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding chr8-582 chr8 131901219 131901451 + 7.93 0.000 Intergenic Intergenic -2758 NM_001323554 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr10-217 chr10 12374843 12375075 + 7.93 0.000 intron (NM_153498, intron 1 of 10) AluSx3|SINE|Alu -14023 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr12-258 chr12 76111743 76111975 + 7.93 0.000 Intergenic AluSx|SINE|Alu -27174 NM_004537 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr4-432 chr4 49650459 49650691 + 7.93 0.000 Intergenic (GAATG)n|Satellite|Satellite 663933 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr16-618 chr16 54852783 54853015 + 7.93 0.000 Intergenic Intergenic -4666 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA chr14-388 chr14 39199219 39199451 + 7.93 0.000 Intergenic L1M5|LINE|L1 24081 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding chr5-732 chr5 166369490 166369722 + 7.93 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 556764 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA chr2-772 chr2 53603637 53603869 + 7.93 0.000 Intergenic AluJb|SINE|Alu -164030 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr3-640 chr3 67304207 67304439 + 7.93 0.000 Intergenic Intergenic 78859 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA chr11-841 chr11 63740449 63740681 + 7.93 0.000 intron (NM_001265589, intron 3 of 8) AluSx3|SINE|Alu 28210 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding ML143345.1-1 ML143345.1 44152 44384 + 7.93 0.000 NA NA NA NA chr15-210 chr15 62744326 62744558 + 7.93 0.000 intron (NM_015059, intron 29 of 55) FLAM_A|SINE|Alu -79515 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr16-239 chr16 63581259 63581491 + 7.93 0.000 Intergenic L2c|LINE|L2 1540688 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr10-610 chr10 12874929 12875161 + 7.93 0.000 Intergenic Intergenic 126668 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr10-606 chr10 9120914 9121146 + 7.93 0.000 Intergenic AluSc|SINE|Alu -154583 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr4-585 chr4 89890022 89890254 + 7.93 0.000 intron (NM_001371403, intron 1 of 8) L1ME2|LINE|L1 -4716 NM_007351 22915 Hs.268107 NM_007351 ENSG00000138722 MMRN1 ECM|EMILIN4|GPIa*|MMRN multimerin 1 protein-coding chr9-530 chr9 96836077 96836309 + 7.93 0.000 intron (NM_001346995, intron 2 of 3) MSTA1-int|LTR|ERVL-MaLR 18321 NM_001346995 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr22-381 chr22 31125136 31125368 + 7.93 0.000 exon (NM_001284286, exon 3 of 14) exon (NM_001284286, exon 3 of 14) 2286 NM_001284285 27124 Hs.517549 NM_014422 ENSG00000185133 INPP5J INPP5|PIB5PA|PIPP inositol polyphosphate-5-phosphatase J protein-coding chr18-88 chr18 38452425 38452657 + 7.93 0.000 Intergenic HAL1|LINE|L1 795406 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr12-191 chr12 109193119 109193351 + 7.93 0.000 intron (NM_001093, intron 15 of 52) AluSz6|SINE|Alu 76648 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr8-493 chr8 48081467 48081699 + 7.93 0.000 Intergenic L1MB8|LINE|L1 73152 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr3-352 chr3 31992018 31992250 + 7.93 0.000 TTS (NM_001137674) TTS (NM_001137674) -10284 NM_001174060 114884 Hs.150122 NM_017784 ENSG00000144645 OSBPL10 ORP10|OSBP9 oxysterol binding protein like 10 protein-coding chr5-243 chr5 73083769 73084001 + 7.93 0.000 intron (NM_001146032, intron 23 of 24) AluSz|SINE|Alu -36690 NM_001161342 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr15-334 chr15 75633496 75633728 + 7.93 0.000 Intergenic AluJo|SINE|Alu 6711 NM_018285 55272 Hs.513043 NM_018285 ENSG00000177971 IMP3 BRMS2|C15orf12|MRPS4 IMP U3 small nucleolar ribonucleoprotein 3 protein-coding chr11-767 chr11 3667680 3667912 + 7.93 0.000 intron (NM_020402, intron 3 of 4) intron (NM_020402, intron 3 of 4) 3588 NM_020402 57053 Hs.732806 NM_020402 ENSG00000129749 CHRNA10 - cholinergic receptor nicotinic alpha 10 subunit protein-coding chr13-223 chr13 47663114 47663346 + 7.93 0.000 Intergenic AluSx3|SINE|Alu 269392 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr10-718 chr10 81914716 81914948 + 7.93 0.000 intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 37145 NR_163252 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr5-467 chr5 168569246 168569478 + 7.93 0.000 intron (NM_024594, intron 1 of 6) AluY|SINE|Alu -8389 NR_029520 406895 NR_029520 ENSG00000199035 MIR103A1 MIR103-1|MIRN103-1|mir-103a-1 microRNA 103a-1 ncRNA chr15-306 chr15 17080762 17080994 + 7.93 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3201866 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chrX-57 chrX 127299786 127300018 + 7.93 0.000 Intergenic L1PA13|LINE|L1 480173 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr1-1244 chr1 10867264 10867496 + 7.93 0.000 Intergenic CpG -70734 NM_017766 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr4-35 chr4 49110646 49110878 + 7.93 0.000 Intergenic (CATTC)n|Satellite|Satellite 124120 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr7-519 chr7 101400108 101400340 + 7.93 0.000 intron (NM_133457, intron 1 of 12) intron (NM_133457, intron 1 of 12) 37349 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr12-727 chr12 118378359 118378591 + 7.93 0.000 intron (NM_022491, intron 1 of 11) MER2|DNA|TcMar-Tigger 1920 NM_022491 64426 Hs.416630 NM_022491 ENSG00000111707 SUDS3 SAP45|SDS3 SDS3 homolog, SIN3A corepressor complex component protein-coding chr7-347 chr7 6457064 6457296 + 7.93 0.000 Intergenic AluSx|SINE|Alu -9168 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr3-685 chr3 196359740 196359972 + 7.93 0.000 intron (NM_015562, intron 10 of 10) AluSx1|SINE|Alu -21436 NR_037950 100534611 Hs.733180 NR_037950 TM4SF19-TCTEX1D2 - TM4SF19-TCTEX1D2 readthrough (NMD candidate) ncRNA chr13-228 chr13 67872435 67872667 + 7.93 0.000 Intergenic Intergenic 500164 NR_130792 100874145 Hs.508194 NR_130792 ENSG00000230040 LINC00364 LncRNA00364 long intergenic non-protein coding RNA 364 ncRNA chr12-343 chr12 29745514 29745746 + 7.93 0.000 intron (NM_001367875, intron 5 of 19) AluSx|SINE|Alu 38312 NM_001193451 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr9-402 chr9 18740257 18740489 + 7.93 0.000 intron (NM_001040272, intron 15 of 28) intron (NM_001040272, intron 15 of 28) 167067 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr9-292 chr9 69173961 69174193 + 7.93 0.000 promoter-TSS (NM_004817) promoter-TSS (NM_004817) 22 NM_201629 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr12-313 chr12 103576148 103576380 + 7.73 0.000 Intergenic AluSc8|SINE|Alu -11009 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr7-696 chr7 36515357 36515589 + 7.73 0.000 intron (NM_001177506, intron 20 of 21) (AC)n|Simple_repeat|Simple_repeat 84647 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr5-342 chr5 116902518 116902750 + 7.73 0.000 Intergenic Intergenic -140425 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr15-245 chr15 41091499 41091731 + 7.73 0.000 intron (NM_017553, intron 5 of 35) L1PA10|LINE|L1 24631 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr15-274 chr15 65860916 65861148 + 7.73 0.000 Intergenic AluSc8|SINE|Alu -8459 NM_004663 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr7-524 chr7 107844120 107844352 + 7.73 0.000 Intergenic Intergenic -41003 NM_000111 1811 Hs.1650 NM_000111 ENSG00000091138 SLC26A3 CLD|DRA solute carrier family 26 member 3 protein-coding chr12-531 chr12 74312453 74312685 + 7.73 0.000 Intergenic AluY|SINE|Alu -19938 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr17-746 chr17 18940465 18940697 + 7.73 0.000 Intergenic L1MC1|LINE|L1 -10095 NM_001282417 125206 Hs.462418 NM_152351 ENSG00000154025 SLC5A10 SGLT-5|SGLT5 solute carrier family 5 member 10 protein-coding chr3-612 chr3 25308284 25308516 + 7.73 0.000 intron (NM_001290216, intron 4 of 10) L3|LINE|CR1 -32402 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-699 chr3 11531742 11531974 + 7.73 0.000 intron (NM_001349238, intron 17 of 17) AluJb|SINE|Alu 36940 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-793 chr11 15713585 15713817 + 7.73 0.000 Intergenic Intergenic 69816 NM_001293172 102724957 Hs.512245 NM_001293172 LOC102724957 - uncharacterized LOC102724957 protein-coding chr4-667 chr4 171812882 171813114 + 7.73 0.000 promoter-TSS (NM_001034845) promoter-TSS (NM_001034845) -406 NM_001034845 442117 Hs.386236 NM_001034845 ENSG00000174473 GALNTL6 GALNACT20|GALNT17|GalNAc-T6L polypeptide N-acetylgalactosaminyltransferase like 6 protein-coding chr5-686 chr5 134495647 134495879 + 7.73 0.000 Intergenic Intergenic -10789 NR_105045 101927934 Hs.535775 NR_105045 ENSG00000251169 LINC01843 - long intergenic non-protein coding RNA 1843 ncRNA chr13-154 chr13 105429969 105430201 + 7.73 0.000 Intergenic AluSx3|SINE|Alu -35782 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr7-634 chr7 931022 931254 + 7.73 0.000 intron (NM_006869, intron 2 of 10) GA-rich|Low_complexity|Low_complexity -3922 NM_001284310 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr10-144 chr10 22665523 22665755 + 7.73 0.000 intron (NM_005028, intron 1 of 9) AluJo|SINE|Alu 48469 NM_001330062 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding chr9-717 chr9 133802195 133802427 + 7.73 0.000 intron (NM_001134398, intron 9 of 29) (AC)n|Simple_repeat|Simple_repeat -62356 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr15-187 chr15 75355587 75355819 + 7.73 0.000 TTS (NM_006715) TTS (NM_006715) -2018 NR_030360 693216 NR_030360 ENSG00000284343 MIR631 MIRN631|hsa-mir-631 microRNA 631 ncRNA chr12-749 chr12 124749189 124749421 + 7.73 0.000 Intergenic AluSq2|SINE|Alu 90366 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr11-351 chr11 64196268 64196500 + 7.73 0.000 intron (NM_001282653, intron 5 of 13) AluSx1|SINE|Alu 10213 NM_006819 10963 Hs.337295 NM_006819 ENSG00000168439 STIP1 HEL-S-94n|HOP|IEF-SSP-3521|P60|STI1|STI1L stress induced phosphoprotein 1 protein-coding chr7-399 chr7 135892565 135892797 + 7.73 0.000 Intergenic AluYk3|SINE|Alu 84678 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding KI270729.1-8 KI270729.1 10402 10634 + 7.73 0.000 NA NA NA NA chr9-583 chr9 20646321 20646553 + 7.73 0.000 Intergenic Intergenic -11872 NM_017794 54914 Hs.136247 NM_017794 ENSG00000188352 FOCAD KIAA1797 focadhesin protein-coding chr4-25 chr4 49118886 49119118 + 7.73 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 132360 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr18-207 chr18 31684771 31685003 + 7.73 0.000 promoter-TSS (NM_004775) promoter-TSS (NM_004775) -142 NM_004775 9331 Hs.591063 NM_004775 ENSG00000118276 B4GALT6 B4Gal-T6|beta4Gal-T6 beta-1,4-galactosyltransferase 6 protein-coding chr1-767 chr1 85052929 85053161 + 7.73 0.000 Intergenic AluY|SINE|Alu -4505 NM_001253693 55283 Hs.535239 NM_018298 ENSG00000055732 MCOLN3 TRP-ML3|TRPML3 mucolipin 3 protein-coding chr11-991 chr11 132745536 132745768 + 7.73 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 197985 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr7-558 chr7 145150384 145150616 + 7.73 0.000 Intergenic L2a|LINE|L2 -314447 NM_001350894 27010 Hs.660232 NM_022445 ENSG00000196511 TPK1 HTPK1|PP20|THMD5 thiamin pyrophosphokinase 1 protein-coding chr6-582 chr6 112973474 112973706 + 7.73 0.000 Intergenic Intergenic 459857 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA ML143345.1-2 ML143345.1 74639 74871 + 7.73 0.000 NA NA NA NA chr8-461 chr8 28119516 28119748 + 7.73 0.000 intron (NM_018091, intron 7 of 14) L1ME2z|LINE|L1 26493 NM_001284220 55140 Hs.491336 NM_018091 ENSG00000134014 ELP3 KAT9 elongator acetyltransferase complex subunit 3 protein-coding chr16-490 chr16 2769896 2770128 + 7.73 0.000 intron (NM_016333, intron 12 of 14) L2c|LINE|L2 7268 NM_007108 6923 Hs.172772 NM_007108 ENSG00000103363 ELOB SIII|TCEB2 elongin B protein-coding chr2-589 chr2 27180464 27180696 + 7.73 0.000 Intergenic Intergenic -31451 NM_080592 51374 Hs.9527 NM_016085 ENSG00000138085 ATRAID APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18 all-trans retinoic acid induced differentiation factor protein-coding chr2-1047 chr2 160379104 160379336 + 7.73 0.000 intron (NM_002897, intron 1 of 13) AluSz6|SINE|Alu 28662 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr7-569 chr7 4832587 4832819 + 7.73 0.000 intron (NM_018059, intron 4 of 14) AluSz|SINE|Alu 4747 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr13-340 chr13 107880159 107880391 + 7.73 0.000 Intergenic L1PA15|LINE|L1 -12779 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding chr1-1487 chr1 163810670 163810902 + 7.73 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -387595 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr2-1036 chr2 141185981 141186213 + 7.73 0.000 intron (NM_018557, intron 7 of 90) AluSx1|SINE|Alu -599412 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr1-1118 chr1 56333559 56333791 + 7.73 0.000 Intergenic Intergenic -81288 NR_147163 105378744 Hs.183974 NR_147163 ENSG00000223956 LINC01767 - long intergenic non-protein coding RNA 1767 ncRNA chr4-644 chr4 146137662 146137894 + 7.73 0.000 Intergenic AluJb|SINE|Alu -15865 NR_038331 100505545 Hs.122199 NR_038331 ENSG00000248809 LINC01095 - long intergenic non-protein coding RNA 1095 ncRNA chr16-304 chr16 14061446 14061678 + 7.73 0.000 Intergenic Intergenic -9500 NM_001365420 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr20-362 chr20 43054303 43054535 + 7.53 0.000 intron (NM_133170, intron 1 of 31) AluJb|SINE|Alu 85676 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr1-1607 chr1 236078781 236079013 + 7.53 0.000 Intergenic AluSx|SINE|Alu -13807 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr18-214 chr18 43038131 43038363 + 7.53 0.000 intron (NM_001272077, intron 1 of 5) L1MC4|LINE|L1 77438 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr4-244 chr4 49632557 49632789 + 7.53 0.000 Intergenic (GAATG)n|Satellite|Satellite 646031 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr4-193 chr4 139169732 139169964 + 7.53 0.000 intron (NM_001371324, intron 1 of 10) AluY|SINE|Alu 7370 NM_001371339 chr4-524 chr4 14536120 14536352 + 7.53 0.000 intron (NR_126435, intron 5 of 6) AluSx3|SINE|Alu 351933 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA GL000225.1-31 GL000225.1 137591 137823 + 7.53 0.000 NA NA NA NA chrX-288 chrX 140484049 140484281 + 7.53 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 20895 NM_005634 6658 Hs.157429 NM_005634 ENSG00000134595 SOX3 GHDX|MRGH|PHP|PHPX|SOXB SRY-box transcription factor 3 protein-coding chr19-851 chr19 45545549 45545781 + 7.53 0.000 TTS (NM_025136) TTS (NM_025136) 38186 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr9-248 chr9 137650537 137650769 + 7.53 0.000 intron (NM_001354612, intron 1 of 8) L1M4|LINE|L1 31648 NM_001145527 79813 Hs.495511 NM_024757 ENSG00000181090 EHMT1 EHMT1-IT1|EUHMTASE1|Eu-HMTase1|FP13812|GLP|GLP1|KLEFS1|KMT1D euchromatic histone lysine methyltransferase 1 protein-coding chr1-647 chr1 67277426 67277658 + 7.53 0.000 Intergenic L1PA7|LINE|L1 -29822 NM_001258215 3595 Hs.479347 NM_001559 ENSG00000081985 IL12RB2 - interleukin 12 receptor subunit beta 2 protein-coding chr11-381 chr11 18656369 18656601 + 7.53 0.000 Intergenic AluSx1|SINE|Alu -22143 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr20-211 chr20 34650594 34650826 + 7.53 0.000 intron (NM_080476, intron 2 of 11) AluSx|SINE|Alu 26575 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr8-216 chr8 65687920 65688152 + 7.53 0.000 intron (NM_001145839, intron 3 of 6) AluSx|SINE|Alu 18163 NM_001145838 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr1-1566 chr1 209789223 209789455 + 7.53 0.000 intron (NM_006147, intron 8 of 8) intron (NM_006147, intron 8 of 8) -4780 NM_152485 148304 Hs.497642 NM_152485 ENSG00000162757 C1orf74 URLC4 chromosome 1 open reading frame 74 protein-coding chr8-389 chr8 38090895 38091127 + 7.53 0.000 Intergenic HERV1_I-int|LTR|ERV1 -14482 NM_001282272 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr2-885 chr2 11420058 11420290 + 7.53 0.000 Intergenic Intergenic 26193 NR_047499 100874055 Hs.102428 NR_047499 ENSG00000224177 LINC00570 ncRNA-a5 long intergenic non-protein coding RNA 570 ncRNA chr1-1522 chr1 184903790 184904022 + 7.53 0.000 intron (NM_052966, intron 1 of 13) AluSz|SINE|Alu 70602 NM_052966 116496 Hs.518662 NM_052966 ENSG00000135842 NIBAN1 C1orf24|FAM129A|GIG39|NIBAN niban apoptosis regulator 1 protein-coding chr3-850 chr3 138946175 138946407 + 7.53 0.000 promoter-TSS (NM_001040061) promoter-TSS (NM_001040061) 846 NM_023067 668 Hs.289292 NM_023067 ENSG00000183770 FOXL2 BPES|BPES1|PFRK|PINTO|POF3 forkhead box L2 protein-coding chr14-462 chr14 100283332 100283564 + 7.53 0.000 TTS (NM_003403) TTS (NM_003403) 6091 NR_106822 102466730 NR_106822 ENSG00000283840 MIR6764 hsa-mir-6764 microRNA 6764 ncRNA chr7-750 chr7 69148215 69148447 + 7.53 0.000 Intergenic AluSx1|SINE|Alu 449293 NR_108105 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr21-23 chr21 25451545 25451777 + 7.53 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -19960 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA chr12-708 chr12 109603184 109603416 + 7.53 0.000 Intergenic Intergenic 29506 NM_001114185 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chrX-98 chrX 71489578 71489810 + 7.53 0.000 intron (NR_104387, intron 38 of 39) intron (NR_104387, intron 38 of 39) 2755 NR_002226 27160 Hs.721806 NR_002226 ENSG00000243468 INGX ING1-like|ING2 inhibitor of growth family, X-linked (pseudogene) pseudo chr2-512 chr2 227714644 227714876 + 7.53 0.000 promoter-TSS (NM_001371411) promoter-TSS (NM_001371411) -136 NM_001371411 chr11-430 chr11 46930818 46931050 + 7.53 0.000 Intergenic AluJr|SINE|Alu -5755 NM_001003676 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr9-362 chr9 99387180 99387412 + 7.53 0.000 Intergenic AluSc8|SINE|Alu -12039 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr6-587 chr6 122090503 122090735 + 7.53 0.000 Intergenic Intergenic -308932 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr21-139 chr21 33989053 33989285 + 7.53 0.000 Intergenic Intergenic 12787 NR_134561 101928126 Hs.436879 NR_134561 LOC101928126 - uncharacterized LOC101928126 ncRNA chr14-385 chr14 35404569 35404801 + 7.53 0.000 promoter-TSS (NM_020529) promoter-TSS (NM_020529) 69 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr16-534 chr16 86093533 86093765 + 7.53 0.000 Intergenic MIR|SINE|MIR -102532 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr13-256 chr13 27237213 27237445 + 7.53 0.000 promoter-TSS (NR_120429) promoter-TSS (NR_120429) -72 NR_120429 102723332 Hs.133166 NR_120429 LINC00412 - long intergenic non-protein coding RNA 412 ncRNA chr4-358 chr4 84864271 84864503 + 7.53 0.000 intron (NM_014991, intron 3 of 67) AluSx|SINE|Alu -101229 NR_152771 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr14-375 chr14 21094817 21095049 + 7.53 0.000 intron (NM_001102454, intron 1 of 4) intron (NM_001102454, intron 1 of 4) 3722 NM_016423 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr1-1224 chr1 6275162 6275394 + 7.53 0.000 intron (NM_181866, intron 8 of 8) intron (NM_181866, intron 8 of 8) -14180 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr1-1610 chr1 238325305 238325537 + 7.53 0.000 Intergenic AluSx|SINE|Alu 160596 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr12-442 chr12 80118803 80119035 + 7.53 0.000 intron (NM_001368062, intron 1 of 62) intron (NM_001368062, intron 1 of 62) 19382 NM_001368062 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr7-608 chr7 111465381 111465613 + 7.53 0.000 intron (NM_001350961, intron 4 of 7) intron (NM_001350961, intron 4 of 7) 96794 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr1-1187 chr1 214702060 214702292 + 7.53 0.000 Intergenic L1MD1|LINE|L1 98981 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding chr9-529 chr9 96619678 96619910 + 7.53 0.000 promoter-TSS (NM_003671) promoter-TSS (NM_003671) 49 NM_003671 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chr10-656 chr10 44882251 44882483 + 7.53 0.000 intron (NR_033842, intron 2 of 7) intron (NR_033842, intron 2 of 7) -28949 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr8-317 chr8 65615276 65615508 + 7.53 0.000 intron (NM_018120, intron 3 of 6) intron (NM_018120, intron 3 of 6) 18785 NM_018120 55156 Hs.269542 NM_018120 ENSG00000104442 ARMC1 Arcp armadillo repeat containing 1 protein-coding chr9-596 chr9 33861757 33861989 + 7.53 0.000 intron (NM_017811, intron 1 of 4) AluSx3|SINE|Alu 44713 NM_017811 54926 Hs.643648 NM_017811 ENSG00000107341 UBE2R2 CDC34B|E2-CDC34B|UBC3B ubiquitin conjugating enzyme E2 R2 protein-coding chr16-515 chr16 64583101 64583333 + 7.53 0.000 Intergenic AluJb|SINE|Alu 538846 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr14-473 chr14 103084117 103084349 + 7.53 0.000 promoter-TSS (NM_001330236) promoter-TSS (NM_001330236) 23 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr22-123 chr22 36402782 36403014 + 7.53 0.000 Intergenic AluSg4|SINE|Alu -14831 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr11-703 chr11 65562990 65563222 + 7.53 0.000 Intergenic AluY|SINE|Alu -4878 NM_001130144 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr13-338 chr13 104407413 104407645 + 7.53 0.000 Intergenic L1MD1|LINE|L1 982329 NR_126374 104326190 Hs.334381 NR_126374 ENSG00000234551 LINC01309 TCONS_l2_00007459 long intergenic non-protein coding RNA 1309 ncRNA chr6-300 chr6 154623952 154624184 + 7.53 0.000 Intergenic AluSx1|SINE|Alu -109310 NM_014892 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr6-531 chr6 42864104 42864336 + 7.53 0.000 intron (NM_001318819, intron 13 of 13) AluSx1|SINE|Alu -15396 NR_134563 285855 Hs.520133 NM_198486 ENSG00000146223 RPL7L1 dJ475N16.4 ribosomal protein L7 like 1 protein-coding chr6-538 chr6 47346148 47346380 + 7.33 0.000 Intergenic AluSx3|SINE|Alu -36359 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr15-244 chr15 41041942 41042174 + 7.33 0.000 intron (NM_017553, intron 24 of 35) AluSz|SINE|Alu 74188 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr7-413 chr7 7923152 7923384 + 7.33 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 45484 NR_110018 100505921 Hs.634989 NR_110018 LOC100505921 - uncharacterized LOC100505921 ncRNA chr5-359 chr5 161163090 161163322 + 7.33 0.000 Intergenic AluSx4|SINE|Alu -224580 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA chr10-303 chr10 11829661 11829893 + 7.33 0.000 intron (NM_153256, intron 1 of 3) intron (NM_153256, intron 1 of 3) 6421 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding chr17-755 chr17 26937633 26937865 + 7.33 0.000 Intergenic (GAATG)n|Satellite|Satellite 151492 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr2-251 chr2 230600778 230601010 + 7.33 0.000 Intergenic AluSg|SINE|Alu 99635 NR_040038 151475 Hs.528154 NR_040038 ENSG00000226125 LINC01907 - long intergenic non-protein coding RNA 1907 ncRNA chr2-846 chr2 209560368 209560600 + 7.33 0.000 intron (NM_001039538, intron 2 of 14) AluJr|SINE|Alu -18852 NM_001363913 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr16-578 chr16 6239327 6239559 + 7.33 0.000 intron (NM_018723, intron 1 of 15) intron (NM_018723, intron 1 of 15) 219740 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr15-240 chr15 38677487 38677719 + 7.33 0.000 Intergenic AluJb|SINE|Alu -18995 NR_160786 chr10-542 chr10 36077813 36078045 + 7.33 0.000 Intergenic L1PA11|LINE|L1 299627 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA chr17-143 chr17 21969299 21969531 + 7.33 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -233580 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr15-432 chr15 74754311 74754543 + 7.33 0.000 intron (NM_000761, intron 6 of 6) AluJb|SINE|Alu 5582 NM_000761 1544 Hs.1361 NM_000761 ENSG00000140505 CYP1A2 CP12|CYPIA2|P3-450|P450(PA) cytochrome P450 family 1 subfamily A member 2 protein-coding chr19-584 chr19 10743698 10743930 + 7.33 0.000 intron (NM_001005362, intron 1 of 19) AluY|SINE|Alu 25410 NR_030368 693223 NR_030368 ENSG00000207972 MIR638 MIRN638|hsa-mir-638 microRNA 638 ncRNA chr22-270 chr22 24365738 24365970 + 7.33 0.000 intron (NM_015330, intron 13 of 16) (T)n|Simple_repeat|Simple_repeat 23746 NM_001254733 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr9-639 chr9 98636429 98636661 + 7.33 0.000 intron (NM_005458, intron 1 of 18) AluSx3|SINE|Alu 72390 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr12-551 chr12 129932393 129932625 + 7.33 0.000 Intergenic AluSx1|SINE|Alu -28484 NM_133448 121256 Hs.507268 NM_133448 ENSG00000151952 TMEM132D MOLT|PPP1R153 transmembrane protein 132D protein-coding chr14-498 chr14 105309762 105309994 + 7.33 0.000 intron (NM_001243127, intron 1 of 23) AluSg7|SINE|Alu -4870 NM_015197 23241 Hs.525626 NM_015197 ENSG00000179364 PACS2 EIEE66|PACS-2|PACS1L phosphofurin acidic cluster sorting protein 2 protein-coding chr17-367 chr17 59135208 59135440 + 7.33 0.000 intron (NM_182620, intron 1 of 3) AluSx1|SINE|Alu 2548 NR_030411 768216 NR_030411 ENSG00000211514 MIR454 MIRN454|hsa-mir-454|mir-454 microRNA 454 ncRNA chr22-184 chr22 33306741 33306973 + 7.33 0.000 intron (NM_133642, intron 11 of 14) AluSx3|SINE|Alu 129812 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA chr12-166 chr12 122805144 122805376 + 7.33 0.000 intron (NR_027918, intron 9 of 12) intron (NR_027918, intron 9 of 12) -29488 NM_001303099 9026 Hs.524815 NM_003959 ENSG00000130787 HIP1R HIP12|HIP3|ILWEQ huntingtin interacting protein 1 related protein-coding chr22-368 chr22 24955845 24956077 + 7.33 0.000 Intergenic AluY|SINE|Alu -9266 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr18-71 chr18 36480902 36481134 + 7.33 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 182400 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA chr9-175 chr9 32828617 32828849 + 7.33 0.000 Intergenic AluYe5|SINE|Alu 45193 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr10-469 chr10 86483656 86483888 + 7.33 0.000 intron (NM_001318328, intron 4 of 18) Tigger3b|DNA|TcMar-Tigger 38012 NM_001318328 23063 Hs.203099 NM_015045 ENSG00000062650 WAPL FOE|KIAA0261|WAPAL WAPL cohesin release factor protein-coding chrX-256 chrX 83678898 83679130 + 7.33 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 170724 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr3-544 chr3 127304169 127304401 + 7.33 0.000 Intergenic Intergenic -16239 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding chr14-144 chr14 39187435 39187667 + 7.33 0.000 Intergenic AluSx|SINE|Alu 12297 NM_002687 5411 Hs.409965 NM_002687 ENSG00000100941 PNN DRS|DRSP|SDK3|memA pinin, desmosome associated protein protein-coding chr15-330 chr15 73543823 73544055 + 7.33 0.000 intron (NM_001042367, intron 3 of 5) intron (NM_001042367, intron 3 of 5) 25604 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chrX-177 chrX 48920941 48921173 + 7.33 0.000 TTS (NM_001136158) TTS (NM_001136158) -2033 NM_006875 11040 Hs.727148 NM_006875 ENSG00000102096 PIM2 - Pim-2 proto-oncogene, serine/threonine kinase protein-coding chr1-965 chr1 147369051 147369283 + 7.33 0.000 Intergenic AluSz|SINE|Alu 126025 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr1-1489 chr1 165399489 165399721 + 7.13 0.000 Intergenic AluSz|SINE|Alu 25379 NM_001256571 6258 Hs.26550 NM_006917 ENSG00000143171 RXRG NR2B3|RXRC retinoid X receptor gamma protein-coding chr14-337 chr14 28309522 28309754 + 7.13 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner 455681 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA chr2-1058 chr2 172860463 172860695 + 7.13 0.000 intron (NM_001282899, intron 1 of 27) (T)n|Simple_repeat|Simple_repeat 541 NM_001282900 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr10-351 chr10 119037785 119038017 + 7.13 0.000 intron (NM_003750, intron 20 of 21) intron (NM_003750, intron 20 of 21) 8187 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr18-174 chr18 76822571 76822803 + 7.13 0.000 promoter-TSS (NR_040024) promoter-TSS (NR_040024) 80 NM_001306089 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr7-185 chr7 70712013 70712245 + 7.13 0.000 intron (NM_015570, intron 6 of 18) AluJb|SINE|Alu -420015 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr11-557 chr11 18194178 18194410 + 7.13 0.000 Intergenic Intergenic -14844 NR_026564 494141 Hs.446327 NR_026541 ENSG00000189332 SLC25A51P4 - SLC25A51 pseudogene 4 pseudo chrX-172 chrX 41506660 41506892 + 7.13 0.000 Intergenic Intergenic 59316 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr8-473 chr8 32859389 32859621 + 7.13 0.000 Intergenic L1PA15|LINE|L1 137670 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr5-540 chr5 155834902 155835134 + 7.13 0.000 Intergenic AluSx1|SINE|Alu -491739 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr1-970 chr1 150919374 150919606 + 7.13 0.000 Intergenic MER5A1|DNA|hAT-Charlie -6773 NM_001366417 9869 Hs.643565 NM_012432 ENSG00000143379 SETDB1 ESET|H3-K9-HMTase4|KG1T|KMT1E|TDRD21 SET domain bifurcated histone lysine methyltransferase 1 protein-coding chr10-667 chr10 60573397 60573629 + 7.13 0.000 promoter-TSS (NM_001204404) promoter-TSS (NM_001204404) -557 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr11-683 chr11 57337196 57337428 + 7.13 0.000 Intergenic AluSx1|SINE|Alu -1040 NM_002559 5024 Hs.146738 NM_002559 ENSG00000109991 P2RX3 P2X3 purinergic receptor P2X 3 protein-coding chr5-412 chr5 78689290 78689522 + 7.13 0.000 Intergenic AluSp|SINE|Alu -40634 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr6-647 chr6 168133457 168133689 + 7.13 0.000 Intergenic Intergenic -52016 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr8-485 chr8 38548197 38548429 + 7.13 0.000 Intergenic AluY|SINE|Alu -19651 NM_001303531 389649 Hs.546586 NM_207412 ENSG00000196166 C8orf86 - chromosome 8 open reading frame 86 protein-coding chr8-299 chr8 36481747 36481979 + 7.13 0.000 Intergenic L1MC4|LINE|L1 -302511 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr12-656 chr12 61146188 61146420 + 7.13 0.000 Intergenic AluY|SINE|Alu 1046535 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr11-605 chr11 67147449 67147681 + 7.13 0.000 intron (NR_027473, intron 2 of 20) intron (NR_027473, intron 2 of 20) 28302 NM_012308 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr7-621 chr7 145848109 145848341 + 7.13 0.000 Intergenic Intergenic -926046 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding chr13-196 chr13 99421193 99421425 + 7.13 0.000 Intergenic MLT1I|LTR|ERVL-MaLR 65178 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr19-820 chr19 34324396 34324628 + 7.13 0.000 intron (NM_014686, intron 3 of 13) AluJo|SINE|Alu -40228 NM_001289789 2821 Hs.466471 NM_000175 ENSG00000105220 GPI AMF|GNPI|NLK|PGI|PHI|SA-36|SA36 glucose-6-phosphate isomerase protein-coding chr4-38 chr4 49147226 49147458 + 7.13 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 160700 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr4-558 chr4 66831516 66831748 + 7.13 0.000 Intergenic AluSc|SINE|Alu 554808 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr17-810 chr17 55485359 55485591 + 7.13 0.000 Intergenic AluJo|SINE|Alu -63640 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr4-418 chr4 14111832 14112064 + 7.13 0.000 promoter-TSS (NR_033931) promoter-TSS (NR_033931) -20 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr3-629 chr3 52298773 52299005 + 7.13 0.000 Intergenic Intergenic -4581 NR_029677 406925 NR_029677 ENSG00000207926 MIR135A1 MIRN135-1|MIRN135A1|mir-135a-1 microRNA 135a-1 ncRNA chr10-541 chr10 34658015 34658247 + 7.13 0.000 intron (NM_001184789, intron 2 of 22) AluY|SINE|Alu 157165 NM_001184794 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr11-480 chr11 125552449 125552681 + 7.13 0.000 Intergenic HUERS-P3b-int|LTR|ERV1 -16912 NM_004879 9538 Hs.643514 NM_004879 ENSG00000149547 EI24 EPG4|PIG8|TP53I8 EI24 autophagy associated transmembrane protein protein-coding chr12-504 chr12 43882337 43882569 + 7.13 0.000 intron (NM_001286213, intron 2 of 6) AluSq2|SINE|Alu 46372 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr15-300 chr15 92179646 92179878 + 7.13 0.000 Intergenic Intergenic -214119 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding chrX-208 chrX 24572227 24572459 + 7.13 0.000 intron (NM_004845, intron 7 of 7) intron (NM_004845, intron 7 of 7) 75004 NM_001163265 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr21-54 chr21 35287756 35287988 + 7.13 0.000 Intergenic L1MA6|LINE|L1 -238574 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr15-366 chr15 41363208 41363440 + 7.13 0.000 intron (NM_001243144, intron 5 of 8) intron (NM_001243144, intron 5 of 8) 30443 NM_018454 51203 Hs.615092 NM_016359 ENSG00000137804 NUSAP1 ANKT|BM037|LNP|NUSAP|PRO0310p1|Q0310|SAPL nucleolar and spindle associated protein 1 protein-coding chr3-466 chr3 196438074 196438306 + 7.13 0.000 Intergenic AluJr|SINE|Alu -5763 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr17-478 chr17 57969970 57970202 + 7.13 0.000 Intergenic Intergenic -14674 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr5-734 chr5 169610492 169610724 + 7.13 0.000 Intergenic L1M1|LINE|L1 26528 NM_001329640 54908 Hs.368710 NM_017785 ENSG00000040275 SPDL1 CCDC99 spindle apparatus coiled-coil protein 1 protein-coding chr19-771 chr19 7466250 7466482 + 7.13 0.000 intron (NM_001130955, intron 13 of 19) AluSx|SINE|Alu 22669 NM_001270539 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr13-291 chr13 49231467 49231699 + 7.13 0.000 Intergenic AluJb|SINE|Alu 11245 NM_001507 2862 Hs.248126 NM_001507 ENSG00000102539 MLNR GPR38|MTLR1 motilin receptor protein-coding chr3-419 chr3 6455273 6455505 + 7.13 0.000 Intergenic Intergenic 350060 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr18-191 chr18 11874681 11874913 + 7.13 0.000 intron (NM_001369387, intron 10 of 11) intron (NM_001369387, intron 10 of 11) 17044 NM_001261444 2774 Hs.136295 NM_002071 ENSG00000141404 GNAL DYT25 G protein subunit alpha L protein-coding chr15-474 chr15 93030254 93030486 + 7.13 0.000 Intergenic L2a|LINE|L2 42786 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr8-565 chr8 124622635 124622867 + 7.13 0.000 intron (NM_001282971, intron 3 of 14) AluSz|SINE|Alu 83628 NM_005005 4715 Hs.15977 NM_005005 ENSG00000147684 NDUFB9 B22|CI-B22|LYRM3|MC1DN24|UQOR22 NADH:ubiquinone oxidoreductase subunit B9 protein-coding chr6-326 chr6 17645343 17645575 + 7.13 0.000 intron (NM_005124, intron 14 of 21) AluJr|SINE|Alu 45157 NM_016255 51439 Hs.95260 NM_016255 ENSG00000137414 FAM8A1 AHCP family with sequence similarity 8 member A1 protein-coding chr2-1066 chr2 176541983 176542215 + 7.13 0.000 Intergenic AluJr|SINE|Alu 58953 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr13-269 chr13 38550250 38550482 + 6.93 0.000 intron (NR_126377, intron 2 of 2) L1MA1|LINE|L1 -17358 NR_046999 100874147 Hs.555371 NR_046999 LINC00366 - long intergenic non-protein coding RNA 366 ncRNA chrX-42 chrX 101038221 101038453 + 6.93 0.000 intron (NM_001167972, intron 3 of 12) AluSp|SINE|Alu 13774 NM_024917 79979 Hs.496501 NM_024917 ENSG00000188917 TRMT2B CXorf34|dJ341D10.3 tRNA methyltransferase 2 homolog B protein-coding chr3-831 chr3 122346850 122347082 + 6.93 0.000 Intergenic AluSz|SINE|Alu 21718 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr14-363 chr14 89534026 89534258 + 6.93 0.000 intron (NM_001085471, intron 1 of 6) AluSx|SINE|Alu -42074 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr19-435 chr19 16568936 16569168 + 6.93 0.000 intron (NM_024881, intron 2 of 5) AluSc|SINE|Alu 3363 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr1-1233 chr1 9036728 9036960 + 6.93 0.000 3' UTR (NM_001328620, exon 12 of 12) 3' UTR (NM_001328620, exon 12 of 12) -10499 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr3-772 chr3 56440500 56440732 + 6.93 0.000 intron (NR_132749, intron 1 of 17) AluJo|SINE|Alu 27851 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr9-608 chr9 68853896 68854128 + 6.93 0.000 intron (NM_003558, intron 4 of 15) LTR78|LTR|ERV1 73947 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr13-285 chr13 46470618 46470850 + 6.93 0.000 Intergenic AluSx|SINE|Alu -3958 NR_120426 101929344 Hs.491939 NR_120426 LINC01198 - long intergenic non-protein coding RNA 1198 ncRNA chr11-735 chr11 119588843 119589075 + 6.93 0.000 Intergenic Intergenic 140241 NM_002855 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr7-388 chr7 110273267 110273499 + 6.93 0.000 Intergenic AluSz|SINE|Alu -313170 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo chr14-226 chr14 74737857 74738089 + 6.93 0.000 3' UTR (NM_001318508, exon 8 of 8) 3' UTR (NM_001318508, exon 8 of 8) 24829 NM_001318508 51077 Hs.579828 NM_015962 ENSG00000119616 FCF1 Bka|C14orf111|CGI-35|UTP24 FCF1 rRNA-processing protein protein-coding chr20-335 chr20 33750501 33750733 + 6.93 0.000 intron (NM_001282933, intron 4 of 14) AluJr4|SINE|Alu 18621 NM_001282933 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 HIES3 zinc finger protein 341 protein-coding chr9-543 chr9 126709492 126709724 + 6.93 0.000 Intergenic Intergenic 95165 NM_001174147 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr5-649 chr5 101835252 101835484 + 6.93 0.000 Intergenic AluSq2|SINE|Alu 460916 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr20-395 chr20 62291800 62292032 + 6.93 0.000 intron (NM_001363878, intron 14 of 14) intron (NM_001363878, intron 14 of 14) -10980 NM_175573 11047 Hs.90107 NM_007002 ENSG00000130706 ADRM1 ARM-1|ARM1|GP110 adhesion regulating molecule 1 protein-coding chr13-273 chr13 40967644 40967876 + 6.93 0.000 intron (NM_001370329, intron 2 of 9) AluJo|SINE|Alu 14522 NM_001145353 1997 Hs.135646 NM_172373 ENSG00000120690 ELF1 EFTUD1|RIA1 E74 like ETS transcription factor 1 protein-coding chr1-1132 chr1 95058261 95058493 + 6.93 0.000 intron (NM_001305242, intron 2 of 4) AluSz|SINE|Alu -3219 NR_132786 101928098 Hs.730090 NR_132786 ENSG00000230427 LOC101928098 - uncharacterized LOC101928098 ncRNA chr22-344 chr22 38087764 38087996 + 6.93 0.000 intron (NM_025045, intron 10 of 13) intron (NM_025045, intron 10 of 13) -4717 NM_013356 23539 Hs.745256 NM_013356 ENSG00000100156 SLC16A8 MCT3|REMP solute carrier family 16 member 8 protein-coding chr16-580 chr16 10225071 10225303 + 6.93 0.000 Intergenic Intergenic -42279 NM_000833 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr15-258 chr15 53173037 53173269 + 6.93 0.000 Intergenic Intergenic 56788 NR_147181 105370822 Hs.527821 NR_147181 ENSG00000259237 LINC02490 - long intergenic non-protein coding RNA 2490 ncRNA chrX-95 chrX 52933078 52933310 + 6.93 0.000 Intergenic AluJo|SINE|Alu 23561 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156 member B protein-coding chr2-598 chr2 36816385 36816617 + 6.93 0.000 Intergenic BLACKJACK|DNA|hAT-Blackjack 119794 NM_001177971 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr10-378 chr10 59835902 59836134 + 6.93 0.000 intron (NM_005436, intron 2 of 8) AluJo|SINE|Alu 70538 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding chr12-609 chr12 40100875 40101107 + 6.93 0.000 intron (NM_052885, intron 1 of 9) intron (NM_052885, intron 1 of 9) 5090 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr1-1083 chr1 14278134 14278366 + 6.93 0.000 Intergenic L1MC5|LINE|L1 141723 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chrX-173 chrX 42335507 42335739 + 6.93 0.000 Intergenic L1PA8A|LINE|L1 -412069 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr11-917 chr11 77922077 77922309 + 6.93 0.000 intron (NM_033547, intron 13 of 22) AluSx1|SINE|Alu 72475 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr2-535 chr2 60876302 60876534 + 6.93 0.000 intron (NR_033980, intron 1 of 2) AluSx4|SINE|Alu 4896 NR_033980 400957 Hs.170358 NR_033980 ENSG00000228414 LINC01185 - long intergenic non-protein coding RNA 1185 ncRNA chr15-429 chr15 72591109 72591341 + 6.93 0.000 3' UTR (NM_005744, exon 14 of 14) 3' UTR (NM_005744, exon 14 of 14) 4008 NR_030359 693215 NR_030359 ENSG00000283798 MIR630 MIRN630|hsa-mir-630 microRNA 630 ncRNA chr4-429 chr4 48657378 48657610 + 6.93 0.000 intron (NM_015030, intron 3 of 63) intron (NM_015030, intron 3 of 63) 122805 NM_015030 285527 Hs.595553 NM_015030 ENSG00000075539 FRYL AF4p12|KIAA0826|MOR2 FRY like transcription coactivator protein-coding chr15-226 chr15 90014800 90015032 + 6.74 0.000 intron (NM_198526, intron 1 of 4) AluSp|SINE|Alu 8161 NR_036135 100422841 NR_036135 ENSG00000265871 MIR3174 - microRNA 3174 ncRNA chr5-706 chr5 143592779 143593011 + 6.74 0.000 Intergenic Intergenic -86965 NR_049829 100846991 NR_049829 ENSG00000266478 MIR5197 - microRNA 5197 ncRNA chr10-605 chr10 9083873 9084105 + 6.74 0.000 Intergenic AluSx4|SINE|Alu 186000 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chr1-260 chr1 7013111 7013343 + 6.74 0.000 intron (NM_001349608, intron 2 of 21) AluSz6|SINE|Alu 227773 NM_001349612 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr16-271 chr16 30319180 30319412 + 6.74 0.000 intron (NR_002453, intron 1 of 12) AluSx|SINE|Alu 16078 NR_002453 595101 Hs.654650 NR_002453 ENSG00000183604 SMG1P5 - SMG1 pseudogene 5 pseudo chr20-311 chr20 7095775 7096007 + 6.74 0.000 Intergenic AluSc|SINE|Alu 158311 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA chr17-304 chr17 30770542 30770774 + 6.74 0.000 TTS (NR_024187) TTS (NR_024187) 54034 NM_015986 51379 Hs.649372 NM_015986 ENSG00000176390 CRLF3 CREME-9|CREME9|CRLM9|CYTOR4|FRWS|p48.2 cytokine receptor like factor 3 protein-coding chr4-591 chr4 98319683 98319915 + 6.74 0.000 intron (NM_021159, intron 2 of 14) AluSz|SINE|Alu 58415 NM_021159 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding KI270937.1-1 KI270937.1 83187 83419 + 6.74 0.000 NA NA NA NA chr3-652 chr3 108621515 108621747 + 6.74 0.000 intron (NM_014648, intron 5 of 32) L1MA2|LINE|L1 31909 NM_014648 9666 Hs.409210 NM_014648 ENSG00000198919 DZIP3 PPP1R66|UURF2|hRUL138 DAZ interacting zinc finger protein 3 protein-coding chr4-466 chr4 157212725 157212957 + 6.74 0.000 Intergenic AluYb8|SINE|Alu -7743 NM_001083619 2891 Hs.32763 NM_000826 ENSG00000120251 GRIA2 GLUR2|GLURB|GluA2|GluR-K2|HBGR2 glutamate ionotropic receptor AMPA type subunit 2 protein-coding chr1-1008 chr1 199991281 199991513 + 6.74 0.000 Intergenic AluSp|SINE|Alu -36313 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr19-795 chr19 14697252 14697484 + 6.74 0.000 intron (NM_001352240, intron 4 of 12) AluJr|SINE|Alu 7320 NM_001352244 84449 Hs.515215 NM_032433 ENSG00000160961 ZNF333 - zinc finger protein 333 protein-coding chr1-1525 chr1 188556950 188557182 + 6.74 0.000 Intergenic Intergenic 1113438 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA chr1-170 chr1 100623871 100624103 + 6.74 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 23017 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr8-581 chr8 130376899 130377131 + 6.74 0.000 intron (NM_001247996, intron 2 of 30) intron (NM_001247996, intron 2 of 30) 66645 NM_001247996 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr18-250 chr18 79155603 79155835 + 6.74 0.000 intron (NR_148360, intron 7 of 31) intron (NR_148360, intron 7 of 31) 86325 NR_148360 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr6-537 chr6 44342575 44342807 + 6.74 0.000 promoter-TSS (NM_145026) promoter-TSS (NM_145026) 31 NM_145026 221409 Hs.135283 NM_145026 ENSG00000249481 SPATS1 DDIP|SPATA8|SRSP1 spermatogenesis associated serine rich 1 protein-coding chr19-818 chr19 31427809 31428041 + 6.74 0.000 Intergenic Intergenic -78489 NR_138035 57616 Hs.278436 NM_020856 ENSG00000121297 TSHZ3 TSH3|ZNF537 teashirt zinc finger homeobox 3 protein-coding chr14-350 chr14 63872663 63872895 + 6.74 0.000 intron (NM_015180, intron 1 of 114) AluSx1|SINE|Alu 19775 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr22-409 chr22 40420108 40420340 + 6.74 0.000 intron (NM_020831, intron 11 of 14) intron (NM_020831, intron 11 of 14) 43216 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr8-127 chr8 140876923 140877155 + 6.74 0.000 intron (NM_001352737, intron 3 of 32) AluSx1|SINE|Alu 123965 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr7-681 chr7 25305496 25305728 + 6.74 0.000 Intergenic Intergenic -77126 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding chr18-149 chr18 13568023 13568255 + 6.74 0.000 intron (NM_181482, intron 4 of 5) AluSx|SINE|Alu -42975 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA chr13-181 chr13 49971839 49972071 + 6.74 0.000 Intergenic AluJb|SINE|Alu 24546 NR_037407 100500908 NR_037407 ENSG00000264864 MIR3613 - microRNA 3613 ncRNA chr7-709 chr7 45706398 45706630 + 6.74 0.000 intron (NM_021116, intron 17 of 19) L1MC2|LINE|L1 62504 NR_024271 641977 Hs.723477 NR_024271 ENSG00000214765 SEPTIN7P2 SEPT13|SEPT7B|SEPT7P2 septin 7 pseudogene 2 pseudo chr6-292 chr6 119096529 119096761 + 6.74 0.000 intron (NM_001288576, intron 1 of 15) AluYb8|SINE|Alu -17981 NM_024581 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr4-564 chr4 71273591 71273823 + 6.74 0.000 intron (NM_001098484, intron 3 of 25) L4_B_Mam|LINE|RTE-X -65346 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr22-243 chr22 39442457 39442689 + 6.74 0.000 Intergenic AluSz6|SINE|Alu 10413 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA chr7-790 chr7 101508395 101508627 + 6.74 0.000 intron (NM_133457, intron 3 of 12) AluJr|SINE|Alu 60495 NR_103748 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr22-387 chr22 35396051 35396283 + 6.74 0.000 Intergenic AluY|SINE|Alu -3973 NM_006739 4174 Hs.517582 NM_006739 ENSG00000100297 MCM5 CDC46|MGORS8|P1-CDC46 minichromosome maintenance complex component 5 protein-coding chr22-249 chr22 43392664 43392896 + 6.74 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat -7551 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr13-335 chr13 100331837 100332069 + 6.74 0.000 intron (NR_148031, intron 17 of 22) AluSq4|SINE|Alu 149062 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr11-442 chr11 64417899 64418131 + 6.74 0.000 Intergenic L1MB3|LINE|L1 -31042 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr1-233 chr1 180795 181027 + 6.74 0.000 Intergenic (ACCCTA)n|Simple_repeat|Simple_repeat -1477 NR_148357 102725121 Hs.712940 NR_148357 LOC102725121 - DEAD/H-box helicase 11 pseudogene pseudo chr16-414 chr16 14162059 14162291 + 6.74 0.000 intron (NM_001308142, intron 3 of 16) AluJb|SINE|Alu -24511 NM_001365411 57496 Hs.49143 NM_014048 ENSG00000186260 MRTFB MKL2|MRTF-B|NPD001 myocardin related transcription factor B protein-coding chr7-429 chr7 78031892 78032124 + 6.74 0.000 intron (NM_001301128, intron 20 of 20) intron (NM_001301128, intron 20 of 20) 191878 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr5-750 chr5 180481637 180481869 + 6.74 0.000 Intergenic AluY|SINE|Alu -12626 NM_001370473 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding chr11-309 chr11 34379561 34379793 + 6.74 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -21667 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr13-118 chr13 62393888 62394120 + 6.74 0.000 Intergenic LTR27E|LTR|ERV1 70347 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr10-314 chr10 29859052 29859284 + 6.74 0.000 Intergenic AluJr|SINE|Alu -122232 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr16-633 chr16 65081451 65081683 + 6.74 0.000 intron (NM_001330576, intron 1 of 11) AluY|SINE|Alu 40496 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr21-128 chr21 17423483 17423715 + 6.54 0.000 Intergenic AluSz|SINE|Alu -15291 NR_037586 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr15-164 chr15 40529561 40529793 + 6.54 0.000 Intergenic AluY|SINE|Alu 2873 NR_002208 359821 Hs.678598 NR_002208 MRPL42P5 - mitochondrial ribosomal protein L42 pseudogene 5 pseudo chr16-467 chr16 82611270 82611502 + 6.54 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -15583 NM_001220491 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr5-575 chr5 16276947 16277179 + 6.54 0.000 Intergenic SVA_F|Retroposon|SVA 96822 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr6-261 chr6 10290564 10290796 + 6.54 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -113822 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr1-633 chr1 43670317 43670549 + 6.54 0.000 intron (NM_014663, intron 10 of 21) AluJo|SINE|Alu 20284 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr11-498 chr11 14476650 14476882 + 6.54 0.000 intron (NM_016451, intron 12 of 21) (T)n|Simple_repeat|Simple_repeat 23092 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chr7-740 chr7 62757045 62757277 + 6.54 0.000 Intergenic ALR/Alpha|Satellite|centr 546895 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo chr9-604 chr9 36528239 36528471 + 6.54 0.000 Intergenic AluSz|SINE|Alu -44507 NM_001256687 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr13-226 chr13 51466437 51466669 + 6.54 0.000 Intergenic Intergenic 13208 NR_103812 100507398 Hs.594897 NR_103812 ENSG00000236778 INTS6-AS1 - INTS6 antisense RNA 1 ncRNA chrX-65 chrX 114968336 114968568 + 6.54 0.000 Intergenic AluSx1|SINE|Alu 49164 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr4-215 chr4 70253703 70253935 + 6.54 0.000 Intergenic AluSc8|SINE|Alu 11203 NM_005212 1448 Hs.54415 NM_005212 ENSG00000171209 CSN3 CNS10|CSN10|CSNK|KCA casein kappa protein-coding chr18-135 chr18 52282121 52282353 + 6.54 0.000 Intergenic (AT)n|Simple_repeat|Simple_repeat -57960 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding chr10-554 chr10 72929448 72929680 + 6.54 0.000 intron (NM_152635, intron 7 of 8) AluJb|SINE|Alu 25242 NM_001318125 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr7-764 chr7 79705855 79706087 + 6.54 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 252011 NR_038344 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chrY-15 chrY 11022909 11023141 + 6.54 0.000 Intergenic Intergenic 1112227 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr4-668 chr4 172188687 172188919 + 6.54 0.000 intron (NM_001034845, intron 2 of 12) L2b|LINE|L2 -375196 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr14-297 chr14 68724364 68724596 + 6.54 0.000 Intergenic AluSp|SINE|Alu 69434 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr1-1432 chr1 119753307 119753539 + 6.54 0.000 intron (NM_005518, intron 6 of 9) (AC)n|Simple_repeat|Simple_repeat 15509 NM_005518 3158 Hs.59889 NM_005518 ENSG00000134240 HMGCS2 - 3-hydroxy-3-methylglutaryl-CoA synthase 2 protein-coding chr2-599 chr2 36875387 36875619 + 6.54 0.000 intron (NM_003162, intron 10 of 17) AluJr|SINE|Alu 91033 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr8-438 chr8 18623510 18623742 + 6.54 0.000 intron (NM_015310, intron 11 of 15) AluJr|SINE|Alu 185241 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr19-502 chr19 53450878 53451110 + 6.54 0.000 TTS (NR_110551) TTS (NR_110551) 4767 NM_001289953 388561 Hs.433293 NM_001008401 ENSG00000160336 ZNF761 ZNF468 zinc finger protein 761 protein-coding chr13-218 chr13 35976270 35976502 + 6.54 0.000 intron (NM_001330071, intron 3 of 16) intron (NM_001330071, intron 3 of 16) -120525 NM_001195415 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr20-309 chr20 5918753 5918985 + 6.54 0.000 intron (NM_001819, intron 3 of 4) intron (NM_001819, intron 3 of 4) 7359 NM_001819 1114 Hs.516874 NM_001819 ENSG00000089199 CHGB SCG1 chromogranin B protein-coding chr14-362 chr14 85630163 85630395 + 6.54 0.000 3' UTR (NM_013231, exon 2 of 2) 3' UTR (NM_013231, exon 2 of 2) 96930 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr16-708 chr16 87686559 87686791 + 6.54 0.000 intron (NM_020655, intron 3 of 4) intron (NM_020655, intron 3 of 4) 79311 NM_001351937 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr19-877 chr19 52908707 52908939 + 6.54 0.000 intron (NM_001310127, intron 2 of 2) AluSz6|SINE|Alu 9108 NM_001310127 388559 NM_001310127 ENSG00000213793 ZNF888 - zinc finger protein 888 protein-coding chr6-493 chr6 10960893 10961125 + 6.54 0.000 intron (NM_001040274, intron 26 of 29) AluSq2|SINE|Alu -6920 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr7-557 chr7 140913385 140913617 + 6.54 0.000 intron (NR_148928, intron 1 of 17) AluSc5|SINE|Alu 11428 NR_148928 673 Hs.324250 NM_004333 ENSG00000157764 BRAF B-RAF1|B-raf|BRAF1|NS7|RAFB1 B-Raf proto-oncogene, serine/threonine kinase protein-coding chr7-592 chr7 72342119 72342351 + 6.54 0.000 intron (NM_001363460, intron 1 of 5) AluJr4|SINE|Alu -4844 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding chr9-431 chr9 86260762 86260994 + 6.54 0.000 Intergenic AluSx1|SINE|Alu -1221 NM_001276366 389766 Hs.632073 NM_001010907 ENSG00000187753 C9orf153 bA507D14.1 chromosome 9 open reading frame 153 protein-coding chr16-718 chr16 89092740 89092972 + 6.34 0.000 promoter-TSS (NM_001243279) promoter-TSS (NM_001243279) -953 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr13-238 chr13 100358991 100359223 + 6.34 0.000 intron (NR_148031, intron 18 of 22) AluSx|SINE|Alu 121908 NR_047686 100885777 Hs.662554 NR_047686 PCCA-AS1 - PCCA antisense RNA 1 ncRNA chr1-1265 chr1 17563113 17563345 + 6.34 0.000 intron (NR_137287, intron 1 of 29) L2a|LINE|L2 -17324 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr12-453 chr12 104169647 104169879 + 6.34 0.000 Intergenic AluSx|SINE|Alu -31553 NM_006166 4801 Hs.84928 NM_006166 ENSG00000120837 NFYB CBF-A|CBF-B|HAP3|NF-YB nuclear transcription factor Y subunit beta protein-coding chr6-443 chr6 73224992 73225224 + 6.34 0.000 intron (NM_001126063, intron 1 of 2) AluY|SINE|Alu 388 NM_001126063 100129128 Hs.663639 NM_001126063 ENSG00000256980 KHDC1L - KH domain containing 1 like protein-coding chr7-468 chr7 30005991 30006223 + 6.34 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -15818 NM_001145514 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chr2-728 chr2 227921096 227921328 + 6.34 0.000 intron (NM_178821, intron 11 of 12) intron (NM_178821, intron 11 of 12) 49581 NM_178821 164781 Hs.424594 NM_178821 ENSG00000123977 DAW1 ODA16|WDR69 dynein assembly factor with WD repeats 1 protein-coding chr9-564 chr9 368708 368940 + 6.34 0.000 intron (NM_001193536, intron 14 of 46) AluSq2|SINE|Alu 95776 NM_001193536 81704 Hs.132599 NM_203447 ENSG00000107099 DOCK8 HEL-205|MRD2|ZIR8 dedicator of cytokinesis 8 protein-coding chr2-214 chr2 154610627 154610859 + 6.34 0.000 Intergenic Intergenic -87838 NM_001260508 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding chr2-948 chr2 48643578 48643810 + 6.34 0.000 intron (NM_172311, intron 6 of 10) AluSx1|SINE|Alu 25838 NM_006872 11036 Hs.732016 NM_006872 ENSG00000242441 GTF2A1L ALF general transcription factor IIA subunit 1 like protein-coding chr14-435 chr14 76118432 76118664 + 6.34 0.000 Intergenic Intergenic -33337 NM_001322031 55668 Hs.410231 NM_017926 ENSG00000089916 GPATCH2L C14orf118 G-patch domain containing 2 like protein-coding chr4-584 chr4 88987718 88987950 + 6.34 0.000 intron (NM_014883, intron 4 of 23) AluYc|SINE|Alu 69351 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr2-1074 chr2 178824483 178824715 + 6.34 0.000 Intergenic AluSx|SINE|Alu -17176 NM_133432 7273 Hs.134602 NM_003319 ENSG00000155657 TTN CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD titin protein-coding chr5-291 chr5 133900313 133900545 + 6.34 0.000 Intergenic (CCA)n|Simple_repeat|Simple_repeat -13248 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr16-671 chr16 79597708 79597940 + 6.34 0.000 3' UTR (NM_001031804, exon 1 of 1) 3' UTR (NM_001031804, exon 1 of 1) 2913 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr7-236 chr7 73674352 73674584 + 6.34 0.000 Intergenic Intergenic 6637 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr5-524 chr5 139239159 139239391 + 6.34 0.000 Intergenic AluSg7|SINE|Alu -34477 NM_001282278 9782 Hs.268939 NM_018834 ENSG00000015479 MATR3 ALS21|MPD2|VCPDM matrin 3 protein-coding chr11-898 chr11 73286476 73286708 + 6.34 0.000 intron (NM_001277207, intron 2 of 2) L3|LINE|CR1 14450 NM_001277204 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding chr7-552 chr7 137696317 137696549 + 6.34 0.000 intron (NM_001321708, intron 1 of 32) (T)n|Simple_repeat|Simple_repeat 149899 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr1-243 chr1 86452078 86452310 + 6.34 0.000 intron (NM_006536, intron 12 of 13) L2c|LINE|L2 -16733 NM_001285 1179 Hs.194659 NM_001285 ENSG00000016490 CLCA1 CACC|CACC1|CLCRG1|CaCC-1|GOB5|hCLCA1|hCaCC-1 chloride channel accessory 1 protein-coding chr7-369 chr7 55899241 55899473 + 6.34 0.000 intron (NM_182633, intron 1 of 6) AluY|SINE|Alu 11901 NM_001366796 349075 Hs.660834 NM_182633 ENSG00000178665 ZNF713 - zinc finger protein 713 protein-coding chr12-390 chr12 9693786 9694018 + 6.34 0.000 intron (NM_001004419, intron 5 of 5) AluJb|SINE|Alu 24189 NM_001197317 29121 Hs.268326 NM_013269 ENSG00000069493 CLEC2D CLAX|LLT1|OCIL C-type lectin domain family 2 member D protein-coding chr17-883 chr17 82148976 82149208 + 6.34 0.000 intron (NM_001367828, intron 13 of 16) (TGGA)n|Simple_repeat|Simple_repeat -50856 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr2-1049 chr2 160850605 160850837 + 6.34 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -286234 NM_133484 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr6-552 chr6 79098506 79098738 + 6.34 0.000 Intergenic Intergenic -20368 NM_017934 55023 Hs.511817 NM_017934 ENSG00000146247 PHIP BRWD2|DCAF14|DIDOD|WDR11|ndrp pleckstrin homology domain interacting protein protein-coding ML143345.1-4 ML143345.1 35936 36168 + 6.34 0.000 NA NA NA NA chr20-258 chr20 21170272 21170504 + 6.34 0.000 intron (NM_018474, intron 6 of 12) L1MA2|LINE|L1 44306 NM_001352434 55857 Hs.187635 NM_018474 ENSG00000088970 KIZ C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69 kizuna centrosomal protein protein-coding chr22-217 chr22 38674714 38674946 + 6.34 0.000 TTS (NM_015373) TTS (NM_015373) -7127 NM_020243 56993 Hs.595072 NM_020243 ENSG00000100216 TOMM22 1C9-2|MST065|MSTP065|TOM22 translocase of outer mitochondrial membrane 22 protein-coding chr1-1031 chr1 212243588 212243820 + 6.34 0.000 intron (NR_125984, intron 1 of 3) AluSx3|SINE|Alu -8968 NR_125982 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr22-377 chr22 29399891 29400123 + 6.34 0.000 Intergenic AluY|SINE|Alu -11424 NM_145730 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr16-233 chr16 34085219 34085451 + 6.34 0.000 Intergenic Intergenic -78243 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr14-232 chr14 83784250 83784482 + 6.34 0.000 Intergenic AluSx3|SINE|Alu 1141734 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr3-684 chr3 196307958 196308190 + 6.34 0.000 intron (NM_152773, intron 2 of 4) AluSq2|SINE|Alu 10166 NM_001351628 255758 Hs.733180 NM_152773 ENSG00000213123 TCTEX1D2 SRTD17 Tctex1 domain containing 2 protein-coding chr19-480 chr19 35078218 35078450 + 6.34 0.000 intron (NR_024561, intron 3 of 3) AluSz6|SINE|Alu 27937 NR_024561 100128675 Hs.633989 NR_024561 ENSG00000227392 HPN-AS1 - HPN antisense RNA 1 ncRNA chr5-539 chr5 152275508 152275740 + 6.34 0.000 Intergenic L2a|LINE|L2 129655 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding chr6-477 chr6 167651997 167652229 + 6.34 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 27110 NR_117091 401286 Hs.487182 NR_117091 ENSG00000272549 LINC02538 - long intergenic non-protein coding RNA 2538 ncRNA chr14-165 chr14 64963005 64963237 + 6.14 0.000 intron (NM_001330182, intron 1 of 7) AluSx|SINE|Alu 9215 NM_198686 376267 Hs.512492 NM_198686 ENSG00000139998 RAB15 - RAB15, member RAS oncogene family protein-coding chr21-44 chr21 35984076 35984308 + 6.14 0.000 intron (NR_110418, intron 3 of 5) intron (NR_110418, intron 3 of 5) 20475 NR_110418 101928269 Hs.589909 NR_110418 LOC101928269 - uncharacterized LOC101928269 ncRNA chr18-204 chr18 28176816 28177048 + 6.14 0.000 intron (NM_001792, intron 1 of 15) CpG 198 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding KQ031384.1-3 KQ031384.1 450226 450458 + 6.14 0.000 NA NA NA NA chr8-282 chr8 14493148 14493380 + 6.14 0.000 intron (NM_001322881, intron 2 of 6) intron (NM_001322881, intron 2 of 6) 360246 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA chr13-295 chr13 50278517 50278749 + 6.14 0.000 intron (NR_109974, intron 2 of 6) AluSx|SINE|Alu 106615 NR_002183 145165 Hs.511834 NM_153290 ST13P4 FAM10A4|FAM10A4P ST13, Hsp70 interacting protein pseudogene 4 pseudo chr5-674 chr5 131825873 131826105 + 6.14 0.000 intron (NM_001303622, intron 11 of 12) L1MEd|LINE|L1 -28972 NM_001008738 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr19-770 chr19 6979203 6979435 + 6.14 0.000 intron (NR_024075, intron 6 of 15) L1M5|LINE|L1 11527 NR_024075 326342 Hs.688043 NM_001080498 ENSG00000268758 ADGRE4P EMR4|EMR4P|FIRE|GPR127|PGR16 adhesion G protein-coupled receptor E4, pseudogene pseudo chr5-731 chr5 163977563 163977795 + 6.14 0.000 Intergenic Intergenic 472060 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr19-711 chr19 41251382 41251614 + 6.14 0.000 intron (NM_001278599, intron 11 of 16) AluSq2|SINE|Alu -11059 NM_144732 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr4-77 chr4 49149354 49149586 + 6.14 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 162828 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr16-427 chr16 30717435 30717667 + 6.14 0.000 intron (NM_006662, intron 18 of 33) AluJr|SINE|Alu 7014 NR_002966 677813 Hs.689718 NR_002966 ENSG00000206755 SNORA30 ACA30|SNORA30A small nucleolar RNA, H/ACA box 30 snoRNA chr3-673 chr3 173010361 173010593 + 6.14 0.000 intron (NM_031955, intron 4 of 10) L1P4b|LINE|L1 130758 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding chrX-145 chrX 119472031 119472263 + 6.14 0.000 TTS (NM_001152) TTS (NM_001152) -3027 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr17-634 chr17 28444896 28445128 + 6.14 0.000 Intergenic AluJb|SINE|Alu -28632 NM_001145975 9058 Hs.102307 NM_003984 ENSG00000007216 SLC13A2 NADC1|NaCT|NaDC-1|SDCT1 solute carrier family 13 member 2 protein-coding chr2-696 chr2 180980463 180980695 + 6.14 0.000 promoter-TSS (NM_006357) promoter-TSS (NM_006357) -26 NM_006357 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding chr18-141 chr18 59011713 59011945 + 6.14 0.000 Intergenic Intergenic -23850 NR_024021 390858 Hs.716280 NR_024021 OACYLP ACYL3P O-acyltransferase like, pseudogene pseudo chr17-783 chr17 42343216 42343448 + 6.14 0.000 intron (NM_001369512, intron 4 of 23) intron (NM_001369512, intron 4 of 23) 45110 NM_001369517 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr7-427 chr7 73627115 73627347 + 6.14 0.000 Intergenic Intergenic -2709 NR_134541 51085 Hs.647055 NM_032951 ENSG00000009950 MLXIPL CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14 MLX interacting protein like protein-coding ML143345.1-9 ML143345.1 79663 79895 + 6.14 0.000 NA NA NA NA chr18-200 chr18 24090580 24090812 + 6.14 0.000 intron (NM_001135993, intron 6 of 13) L1MB8|LINE|L1 -22631 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chrY-9 chrY 10776397 10776629 + 5.94 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat 865715 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr16-581 chr16 10673428 10673660 + 5.94 0.000 intron (NM_144674, intron 5 of 6) intron (NM_144674, intron 5 of 6) 21386 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr12-585 chr12 13482488 13482720 + 5.94 0.000 Intergenic AluSz6|SINE|Alu -105859 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr2-809 chr2 127243775 127244007 + 5.94 0.000 Intergenic AluJb|SINE|Alu -23592 NM_001367502 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr12-529 chr12 69265485 69265717 + 5.94 0.000 intron (NM_007007, intron 9 of 9) AluSp|SINE|Alu 7617 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA chr20-353 chr20 38875902 38876134 + 5.94 0.000 intron (NM_015568, intron 2 of 10) AluSq2|SINE|Alu -50399 NM_030919 81610 Hs.726442 NM_030919 ENSG00000101447 FAM83D C20orf129|CHICA|dJ616B8.3 family with sequence similarity 83 member D protein-coding chr4-513 chr4 7831266 7831498 + 5.94 0.000 intron (NM_198595, intron 6 of 16) intron (NM_198595, intron 6 of 16) 40926 NM_001371090 chr2-1020 chr2 117947589 117947821 + 5.94 0.000 intron (NM_019044, intron 15 of 23) AluY|SINE|Alu 66365 NM_019044 54520 Hs.107845 NM_019044 ENSG00000125633 CCDC93 - coiled-coil domain containing 93 protein-coding chr3-578 chr3 181594076 181594308 + 5.94 0.000 intron (NR_075091, intron 4 of 7) AluSc|SINE|Alu -16142 NR_075090 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA chr5-499 chr5 60699244 60699476 + 5.94 0.000 intron (NM_001145208, intron 1 of 9) intron (NM_001145208, intron 1 of 9) 806 NM_018369 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr3-381 chr3 116949793 116950025 + 5.94 0.000 Intergenic Intergenic 28478 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr10-756 chr10 99327920 99328152 + 5.94 0.000 Intergenic AluSq2|SINE|Alu -1063 NR_144311 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr15-456 chr15 86724238 86724470 + 5.94 0.000 intron (NM_152336, intron 23 of 24) L2|LINE|L2 -208526 NR_135682 105370954 Hs.668501 NR_135682 ENSG00000259636 LOC105370954 - uncharacterized LOC105370954 ncRNA chr8-396 chr8 53397208 53397440 + 5.94 0.000 Intergenic AluY|SINE|Alu 126641 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA chr5-733 chr5 167126904 167127136 + 5.94 0.000 intron (NM_001122679, intron 1 of 29) intron (NM_001122679, intron 1 of 29) 41381 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr2-913 chr2 34132044 34132276 + 5.94 0.000 intron (NR_126403, intron 4 of 5) MER57A-int|LTR|ERV1 64934 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA KI270735.1-1 KI270735.1 39586 39818 + 5.94 0.000 NA NA NA NA chr10-310 chr10 27086648 27086880 + 5.94 0.000 intron (NM_014915, intron 4 of 33) AluSx1|SINE|Alu 13734 NM_014915 22852 Hs.361041 NM_014915 ENSG00000107890 ANKRD26 THC2|bA145E8.1 ankyrin repeat domain 26 protein-coding chr3-417 chr3 196581111 196581343 + 5.94 0.000 intron (NM_001105573, intron 2 of 2) AluSc|SINE|Alu -12553 NM_001345912 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr12-713 chr12 110361827 110362059 + 5.94 0.000 Intergenic AluSc8|SINE|Alu 41787 NM_001137664 51434 Hs.719935 NM_016238 ENSG00000196510 ANAPC7 APC7 anaphase promoting complex subunit 7 protein-coding chr5-625 chr5 69125613 69125845 + 5.94 0.000 intron (NM_022902, intron 14 of 15) AluYm1|SINE|Alu 31715 NM_022902 64924 Hs.631975 NM_022902 ENSG00000145740 SLC30A5 ZNT5|ZNTL1|ZTL1|ZnT-5 solute carrier family 30 member 5 protein-coding chr3-785 chr3 64001852 64002084 + 5.94 0.000 3' UTR (NM_000333, exon 13 of 13) 3' UTR (NM_000333, exon 13 of 13) -2054 NR_038286 100507062 Hs.152536 NR_038286 ENSG00000239653 PSMD6-AS2 - PSMD6 antisense RNA 2 ncRNA chr12-579 chr12 6503661 6503893 + 5.94 0.000 intron (NM_014865, intron 2 of 31) intron (NM_014865, intron 2 of 31) -6445 NR_004387 692148 NR_004387 ENSG00000239002 SCARNA10 U85 small Cajal body-specific RNA 10 ncRNA chr13-183 chr13 52023704 52023936 + 5.94 0.000 promoter-TSS (NM_021645) promoter-TSS (NM_021645) -871 NM_021645 9724 Hs.512963 NM_021645 ENSG00000253797 UTP14C 2700066J21Rik|KIAA0266|UTP14B UTP14C small subunit processome component protein-coding chr7-282 chr7 74357918 74358150 + 5.94 0.000 intron (NM_032421, intron 6 of 15) AluSg|SINE|Alu 68559 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chrY-11 chrY 10956449 10956681 + 5.94 0.000 Intergenic (TCCAC)n|Simple_repeat|Simple_repeat 1045767 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr12-237 chr12 124044723 124044955 + 5.94 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 71624 NM_001204299 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding chr1-1099 chr1 33748968 33749200 + 5.94 0.000 intron (NM_052896, intron 13 of 69) L1M6|LINE|L1 -111391 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding chr8-464 chr8 28907693 28907925 + 5.94 0.000 intron (NM_024567, intron 2 of 10) intron (NM_024567, intron 2 of 10) 16495 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr5-592 chr5 36623735 36623967 + 5.94 0.000 intron (NM_001289939, intron 2 of 8) AluSx3|SINE|Alu 17245 NM_004172 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding chr1-183 chr1 248945948 248946180 + 5.75 0.000 Intergenic (AGGGTT)n|Simple_repeat|Simple_repeat 39821 NM_001017434 267002 Hs.602037 NM_170725 ENSG00000185220 PGBD2 - piggyBac transposable element derived 2 protein-coding chr1-1007 chr1 199860939 199861171 + 5.75 0.000 Intergenic AluSx|SINE|Alu -166655 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr3-554 chr3 134300819 134301051 + 5.75 0.000 Intergenic AluY|SINE|Alu -12641 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr6-126 chr6 151144229 151144461 + 5.75 0.000 Intergenic AluY|SINE|Alu 41670 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr7-756 chr7 74670593 74670825 + 5.75 0.000 intron (NM_001163636, intron 1 of 33) AluSx3|SINE|Alu 12991 NM_033001 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr1-543 chr1 36065930 36066162 + 5.75 0.000 3' UTR (NM_024852, exon 19 of 19) 3' UTR (NM_024852, exon 19 of 19) -18048 NM_014466 27285 Hs.127111 NM_014466 ENSG00000092850 TEKT2 TEKTB1|TEKTIN-T|h-tektin-t tektin 2 protein-coding chr14-468 chr14 102428119 102428351 + 5.75 0.000 intron (NM_014844, intron 6 of 19) (T)n|Simple_repeat|Simple_repeat 65294 NM_001172631 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chrX-220 chrX 39929736 39929968 + 5.75 0.000 Intergenic Intergenic 92291 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr3-631 chr3 53049208 53049440 + 5.75 0.000 Intergenic AluY|SINE|Alu -3251 NM_016329 51460 Hs.343679 NM_016329 ENSG00000163935 SFMBT1 RU1|SFMBT|hSFMBT Scm like with four mbt domains 1 protein-coding chr7-711 chr7 46281760 46281992 + 5.75 0.000 Intergenic Intergenic -360604 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr7-864 chr7 151098616 151098848 + 5.75 0.000 intron (NM_001350103, intron 1 of 18) AluSx|SINE|Alu 12257 NM_001350102 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr10-543 chr10 49941646 49941878 + 5.75 0.000 promoter-TSS (NM_001365871) promoter-TSS (NM_001365871) 265 NR_136755 8505 Hs.535298 NM_003631 ENSG00000227345 PARG PARG99 poly(ADP-ribose) glycohydrolase protein-coding chr6-511 chr6 21184737 21184969 + 5.75 0.000 intron (NM_017774, intron 13 of 15) AluJb|SINE|Alu 327039 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr4-109 chr4 49096708 49096940 + 5.75 0.000 Intergenic (CATTC)n|Satellite|Satellite 110182 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr8-410 chr8 114023037 114023269 + 5.75 0.000 Intergenic Intergenic -586214 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr16-272 chr16 30676981 30677213 + 5.75 0.000 Intergenic AluSx4|SINE|Alu 18666 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr9-452 chr9 109500809 109501041 + 5.75 0.000 Intergenic AluJo|SINE|Alu -2618 NM_001145368 5774 Hs.436429 NM_002829 ENSG00000070159 PTPN3 PTP-H1|PTPH1 protein tyrosine phosphatase non-receptor type 3 protein-coding chr5-288 chr5 123581217 123581449 + 5.75 0.000 intron (NM_001044723, intron 5 of 12) (TTTGTT)n|Simple_repeat|Simple_repeat 35916 NM_004384 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr12-675 chr12 82819383 82819615 + 5.55 0.000 intron (NM_001320321, intron 1 of 10) AluSq2|SINE|Alu 132344 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr19-530 chr19 33682087 33682319 + 5.55 0.000 intron (NM_001127895, intron 2 of 4) AluSz|SINE|Alu -2325 NM_022467 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr12-329 chr12 124817260 124817492 + 5.55 0.000 intron (NR_160424, intron 2 of 11) intron (NR_160424, intron 2 of 11) 22295 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr16-431 chr16 34097052 34097284 + 5.55 0.000 Intergenic Intergenic -66410 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr10-770 chr10 102519418 102519650 + 5.55 0.000 intron (NM_001178133, intron 2 of 10) AluSq2|SINE|Alu 15562 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr19-861 chr19 48281697 48281929 + 5.55 0.000 intron (NM_001331098, intron 4 of 5) AluJr|SINE|Alu 10526 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chrX-43 chrX 117235262 117235494 + 5.55 0.000 Intergenic Intergenic -417518 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr3-616 chr3 28575561 28575793 + 5.55 0.000 intron (NR_038840, intron 1 of 4) CpG 399 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr19-549 chr19 772418 772650 + 5.55 0.000 Intergenic Intergenic 21422 NR_135168 126353 Hs.439180 NM_173481 ENSG00000099812 MISP C19orf21|MISP1 mitotic spindle positioning protein-coding chr2-441 chr2 39180583 39180815 + 5.55 0.000 intron (NM_001009565, intron 7 of 7) AluSz|SINE|Alu 48889 NM_001346911 344387 Hs.403201 NM_001009565 ENSG00000205111 CDKL4 - cyclin dependent kinase like 4 protein-coding chr4-390 chr4 154835568 154835800 + 5.55 0.000 Intergenic AluY|SINE|Alu 54179 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr6-512 chr6 22076481 22076713 + 5.55 0.000 intron (NR_015410, intron 8 of 11) AluSx3|SINE|Alu 70596 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr5-627 chr5 72925214 72925446 + 5.55 0.000 Intergenic LTR12C|LTR|ERV1 -30711 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr2-905 chr2 30292804 30293036 + 5.55 0.000 Intergenic AluSq2|SINE|Alu -53726 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chrX-184 chrX 115732854 115733086 + 5.55 0.000 Intergenic CpG -107994 NR_147172 106029310 Hs.571742 NR_147172 DANT1 - DXZ4 associated non-coding transcript 1, proximal ncRNA chr18-194 chr18 21806090 21806322 + 5.55 0.000 intron (NM_020774, intron 10 of 20) AluJr|SINE|Alu 19579 NR_029675 406922 NR_029675 ENSG00000283927 MIR133A1 MIRN133A1|mir-133a-1 microRNA 133a-1 ncRNA chr22-328 chr22 23297089 23297321 + 5.55 0.000 intron (NM_004327, intron 16 of 22) AluJo|SINE|Alu -29411 NR_149133 102724679 Hs.517462 NR_149133 ENSG00000236611 LINC02556 - long intergenic non-protein coding RNA 2556 ncRNA chr4-241 chr4 42608231 42608463 + 5.55 0.000 intron (NM_001105529, intron 5 of 35) intron (NM_001105529, intron 5 of 35) 48758 NM_006095 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr7-602 chr7 100042649 100042881 + 5.55 0.000 intron (NM_001346579, intron 5 of 5) intron (NM_001346579, intron 5 of 5) -7009 NM_145914 7589 Hs.632294 NM_145914 ENSG00000166529 ZSCAN21 NY-REN-21|ZNF38|Zipro1 zinc finger and SCAN domain containing 21 protein-coding chr19-859 chr19 48017732 48017964 + 5.55 0.000 intron (NM_022142, intron 4 of 6) AluJr|SINE|Alu 23216 NM_022142 64100 Hs.104894 NM_022142 ENSG00000169393 ELSPBP1 E12|EDDM12|EL149|HE12 epididymal sperm binding protein 1 protein-coding chr11-505 chr11 63778325 63778557 + 5.55 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -9666 NM_001144936 65998 Hs.191073 NM_001144936 ENSG00000188070 C11orf95 - chromosome 11 open reading frame 95 protein-coding chr22-369 chr22 25740333 25740565 + 5.55 0.000 Intergenic AluSq2|SINE|Alu -1739 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr19-648 chr19 50397278 50397510 + 5.55 0.000 intron (NR_046402, intron 1 of 25) AluSz|SINE|Alu -1458 NM_001308632 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr3-798 chr3 73747364 73747596 + 5.55 0.000 Intergenic AluJr|SINE|Alu -61764 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr19-318 chr19 58607438 58607625 + 5.55 0.000 Intergenic (GGGTTA)n|Simple_repeat|Simple_repeat 32132 NR_026052 65996 Hs.541177 NM_023939 ENSG00000213753 CENPBD1P1 - CENPB DNA-binding domains containing 1 pseudogene 1 pseudo chr2-545 chr2 135148551 135148783 + 5.55 0.000 intron (NM_001172435, intron 17 of 24) AluSz|SINE|Alu 12039 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA chr7-647 chr7 2459030 2459262 + 5.55 0.000 Intergenic AluSx1|SINE|Alu 17237 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr2-792 chr2 96775790 96776022 + 5.55 0.000 intron (NM_020184, intron 1 of 6) AluJr|SINE|Alu 15004 NM_020184 26504 Hs.175043 NM_020184 ENSG00000158158 CNNM4 ACDP4 cyclin and CBS domain divalent metal cation transport mediator 4 protein-coding chr17-404 chr17 42730394 42730626 + 5.55 0.000 intron (NM_001321079, intron 1 of 19) AluY|SINE|Alu 14530 NM_001321082 2145 Hs.194669 NM_001991 ENSG00000108799 EZH1 KMT6B enhancer of zeste 1 polycomb repressive complex 2 subunit protein-coding chr3-388 chr3 141031890 141032122 + 5.55 0.000 Intergenic AluSx1|SINE|Alu -19341 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding chr4-407 chr4 1850690 1850922 + 5.55 0.000 intron (NM_012318, intron 1 of 13) AluSq2|SINE|Alu 5350 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr4-409 chr4 2209368 2209600 + 5.55 0.000 intron (NM_181808, intron 4 of 25) AluSg|SINE|Alu 32637 NM_001303143 79441 Hs.665869 NM_024511 ENSG00000214367 HAUS3 C4orf15|IT1|dgt3 HAUS augmin like complex subunit 3 protein-coding chr17-737 chr17 17410252 17410484 + 5.55 0.000 Intergenic L2a|LINE|L2 -66632 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr19-850 chr19 45225618 45225850 + 5.35 0.000 intron (NM_138568, intron 5 of 9) AluSq|SINE|Alu 8477 NM_138568 90332 Hs.337557 NM_138568 ENSG00000283632 EXOC3L2 XTP7 exocyst complex component 3 like 2 protein-coding chr15-302 chr15 96850530 96850762 + 5.35 0.000 Intergenic Intergenic 67211 NR_158221 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr7-379 chr7 88640812 88641044 + 5.35 0.000 Intergenic AluSx1|SINE|Alu -118772 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding chr2-270 chr2 77963898 77964130 + 5.35 0.000 intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) -8988 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA chr10-720 chr10 84083107 84083339 + 5.35 0.000 Intergenic AluSx1|SINE|Alu -56286 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr2-667 chr2 139185485 139185717 + 5.35 0.000 Intergenic AluSc5|SINE|Alu 288277 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr13-219 chr13 40771718 40771950 + 5.35 0.000 promoter-TSS (NM_005830) promoter-TSS (NM_005830) -644 NM_005830 10240 Hs.596607 NM_005830 ENSG00000102738 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding chr2-883 chr2 10815978 10816210 + 5.35 0.000 intron (NM_001282704, intron 3 of 14) AluSq|SINE|Alu -3255 NM_001282707 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr12-485 chr12 130733990 130734222 + 5.35 0.000 Intergenic AluSc|SINE|Alu -17801 NM_001351233 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding chr8-387 chr8 33723880 33724112 + 5.35 0.000 Intergenic AluJo|SINE|Alu -123890 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding chr9-627 chr9 93117864 93118096 + 5.35 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 16271 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr16-380 chr16 85500893 85501125 + 5.35 0.000 Intergenic AluYj4|SINE|Alu -110400 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr3-869 chr3 153173324 153173556 + 5.35 0.000 Intergenic AluSx|SINE|Alu 11214 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr6-278 chr6 62635394 62635626 + 5.15 0.000 Intergenic Charlie1b|DNA|hAT-Charlie -349283 NM_001350622 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding chr10-380 chr10 68819145 68819377 + 5.15 0.000 Intergenic AluSx3|SINE|Alu -8270 NM_152709 219736 Hs.37636 NM_152709 ENSG00000165730 STOX1 C10orf24 storkhead box 1 protein-coding chr3-506 chr3 52100990 52101222 + 5.15 0.000 intron (NM_015426, intron 9 of 10) L1MCc|LINE|L1 -35994 NR_027331 100128378 Hs.640106 NM_001123039 LINC00696 C3orf74 long intergenic non-protein coding RNA 696 ncRNA chr7-605 chr7 102504586 102504818 + 5.15 0.000 intron (NM_001277335, intron 5 of 19) AluSx|SINE|Alu 13075 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr4-340 chr4 38736108 38736340 + 5.15 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 46766 NM_001195108 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr2-967 chr2 65600790 65601022 + 5.15 0.000 Intergenic SVA_D|Retroposon|SVA -168307 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr12-311 chr12 94600117 94600349 + 5.15 0.000 intron (NM_020698, intron 1 of 3) intron (NM_020698, intron 1 of 3) 15768 NM_001301036 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr7-424 chr7 57491665 57491897 + 5.15 0.000 Intergenic Intergenic 41604 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr20-310 chr20 6987086 6987318 + 5.15 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 219516 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chrX-90 chrX 20130198 20130430 + 5.15 0.000 intron (NM_001412, intron 6 of 6) AluSx3|SINE|Alu 6099 NR_023358 100158262 NR_023358 SCARNA9L - small Cajal body-specific RNA 9 like ncRNA chr1-873 chr1 26312902 26313134 + 5.15 0.000 intron (NM_145345, intron 1 of 14) intron (NM_145345, intron 1 of 14) -4940 NM_001803 1043 Hs.276770 NM_001803 ENSG00000169442 CD52 CDW52|EDDM5|HE5 CD52 molecule protein-coding chr1-1143 chr1 114379523 114379755 + 5.15 0.000 Intergenic AluJb|SINE|Alu 131564 NM_015906 51592 Hs.26837 NM_015906 ENSG00000197323 TRIM33 ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA tripartite motif containing 33 protein-coding chr15-394 chr15 55489664 55489896 + 5.15 0.000 intron (NM_001033560, intron 4 of 8) intron (NM_001033560, intron 4 of 8) 8804 NR_037923 100533483 Hs.285051 NR_037923 ENSG00000261771 DNAAF4-CCPG1 DYX1C1-CCPG1 DNAAF4-CCPG1 readthrough (NMD candidate) ncRNA chr2-1033 chr2 131474299 131474531 + 5.15 0.000 Intergenic AluSz|SINE|Alu -1704 NM_080386 113457 Hs.503749 NM_080386 ENSG00000075886 TUBA3D H2-ALPHA|KTCN9|TUBA2 tubulin alpha 3d protein-coding chr5-516 chr5 117001667 117001899 + 5.15 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -239574 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA chr4-562 chr4 70828657 70828889 + 5.15 0.000 intron (NM_001098477, intron 5 of 9) AluSq2|SINE|Alu 10730 NM_001098477 2926 Hs.309763 NM_002092 ENSG00000132463 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding chr1-1322 chr1 35725431 35725663 + 5.15 0.000 intron (NM_001330490, intron 24 of 24) (CCCCA)n|Simple_repeat|Simple_repeat -6663 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr12-528 chr12 68575442 68575674 + 5.15 0.000 Intergenic AluSx1|SINE|Alu -35341 NM_001010942 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr14-364 chr14 95711148 95711380 + 5.15 0.000 intron (NM_001098725, intron 3 of 3) AluY|SINE|Alu 2861 NM_021966 8115 Hs.2484 NM_021966 ENSG00000100721 TCL1A TCL1 T cell leukemia/lymphoma 1A protein-coding chr5-380 chr5 31263286 31263518 + 5.15 0.000 intron (NM_001362435, intron 1 of 10) AluSq2|SINE|Alu 69716 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding GL000216.2-9 GL000216.2 80119 80351 + 5.15 0.000 NA NA NA NA ML143345.1-5 ML143345.1 28757 28989 + 5.15 0.000 NA NA NA NA KQ031384.1-5 KQ031384.1 462889 463121 + 5.15 0.000 NA NA NA NA chr7-461 chr7 4685128 4685360 + 5.15 0.000 intron (NM_001037165, intron 1 of 8) AluSc8|SINE|Alu 2949 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr17-825 chr17 62846787 62847019 + 5.15 0.000 Intergenic AluSx|SINE|Alu 38401 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA chr3-422 chr3 9883061 9883293 + 5.15 0.000 Intergenic AluSx|SINE|Alu -2923 NM_001199551 63924 Hs.567562 NM_022094 ENSG00000187288 CIDEC CIDE-3|CIDE3|FPLD5|FSP27 cell death inducing DFFA like effector c protein-coding chr14-409 chr14 62335688 62335920 + 5.15 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -195831 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA chr11-527 chr11 103477727 103477959 + 5.15 0.000 intron (NM_001377, intron 88 of 88) AluY|SINE|Alu 368417 NM_001080463 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding KQ031384.1-2 KQ031384.1 451029 451261 + 5.15 0.000 NA NA NA NA chr11-395 chr11 69974732 69974964 + 4.95 0.000 Intergenic Intergenic 89076 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA KI270737.1-1 KI270737.1 30953 31185 + 4.95 0.000 NA NA NA NA chr10-818 chr10 125445710 125445942 + 4.95 0.000 Intergenic Intergenic -128545 NR_023362 100169752 Hs.652647 NR_023362 ENSG00000237675 TEX36-AS1 - TEX36 antisense RNA 1 ncRNA chr19-429 chr19 5197889 5198121 + 4.95 0.000 Intergenic AluSx1|SINE|Alu 142807 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr18-106 chr18 62531696 62531928 + 4.95 0.000 intron (NR_126534, intron 1 of 14) AluJb|SINE|Alu 8787 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr18-167 chr18 58044180 58044412 + 4.95 0.000 promoter-TSS (NM_001144967) promoter-TSS (NM_001144967) 70 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr18-157 chr18 38368146 38368378 + 4.95 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 711127 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chrX-71 chrX 22252513 22252745 + 4.95 0.000 intron (NR_073010, intron 8 of 11) intron (NR_073010, intron 8 of 11) -20284 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr8-373 chr8 488793 489025 + 4.95 0.000 TTS (NM_175075) TTS (NM_175075) 26843 NM_001369716 157695 Hs.289293 NM_175075 ENSG00000180190 TDRP C8orf42|Inm01|TDRP1|TDRP2 testis development related protein protein-coding chr1-1115 chr1 53789670 53789902 + 4.95 0.000 intron (NR_033142, intron 13 of 16) AluSq2|SINE|Alu 48510 NM_018087 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding ML143345.1-6 ML143345.1 22012 22244 + 4.95 0.000 NA NA NA NA chr16-422 chr16 24559995 24560227 + 4.95 0.000 intron (NM_018703, intron 8 of 16) AluY|SINE|Alu 20524 NM_032626 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding chr1-1198 chr1 235802099 235802331 + 4.95 0.000 intron (NM_000081, intron 8 of 52) AluSg|SINE|Alu 50845 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chrX-92 chrX 29800863 29801095 + 4.95 0.000 intron (NM_014271, intron 6 of 10) AluSp|SINE|Alu 226701 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr20-159 chr20 5087564 5087796 + 4.95 0.000 intron (NM_001330987, intron 3 of 3) intron (NM_001330987, intron 3 of 3) 25396 NM_001009923 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr4-177 chr4 49108358 49108590 + 4.95 0.000 Intergenic (CATTC)n|Satellite|Satellite 121832 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr11-809 chr11 35873217 35873449 + 4.95 0.000 Intergenic MIR|SINE|MIR -70648 NM_001304263 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr19-806 chr19 17773903 17774135 + 4.95 0.000 intron (NM_001161357, intron 11 of 28) AluSx1|SINE|Alu -21119 NM_014256 10331 Hs.69009 NM_014256 ENSG00000179913 B3GNT3 B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding chr7-674 chr7 22923907 22924139 + 4.95 0.000 Intergenic AluSz6|SINE|Alu 67410 NR_003075 692210 NR_003075 ENSG00000221740 SNORD93 HBII-336 small nucleolar RNA, C/D box 93 snoRNA chr20-137 chr20 35015373 35015605 + 4.95 0.000 intron (NM_199368, intron 10 of 18) AluSx1|SINE|Alu -25017 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr15-318 chr15 52170999 52171231 + 4.95 0.000 intron (NM_006578, intron 1 of 10) AluSx|SINE|Alu 8810 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr13-266 chr13 36131019 36131251 + 4.95 0.000 5' UTR (NM_004734, exon 1 of 18) 5' UTR (NM_004734, exon 1 of 18) 247 NM_004734 9201 Hs.507755 NM_004734 ENSG00000133083 DCLK1 CL1|CLICK1|DCAMKL1|DCDC3A|DCLK doublecortin like kinase 1 protein-coding chr2-456 chr2 83369758 83369990 + 4.95 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -152940 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr1-784 chr1 143222143 143222375 + 4.95 0.000 Intergenic Intergenic 200333 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo chr11-380 chr11 12329771 12330003 + 4.76 0.000 intron (NM_032867, intron 6 of 8) (A)n|Simple_repeat|Simple_repeat 42987 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr11-889 chr11 70905697 70905929 + 4.76 0.000 intron (NM_012309, intron 9 of 24) AluSq2|SINE|Alu -33445 NR_037437 100500844 NR_037437 ENSG00000263744 MIR3664 mir-3664 microRNA 3664 ncRNA chr15-358 chr15 34454963 34455195 + 4.76 0.000 Intergenic AluYb8|SINE|Alu -17271 NR_027409 23015 Hs.182982 NM_181077 ENSG00000175265 GOLGA8A GM88|GOLGA8B golgin A8 family member A protein-coding chr4-126 chr4 49154380 49154612 + 4.76 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 167854 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr22-385 chr22 35194318 35194550 + 4.76 0.000 intron (NR_126356, intron 2 of 5) intron (NR_126356, intron 2 of 5) 36622 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr5-553 chr5 234230 234462 + 4.76 0.000 intron (NM_001294332, intron 7 of 13) AluY|SINE|Alu 16026 NM_004168 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding ML143345.1-8 ML143345.1 33622 33854 + 4.76 0.000 NA NA NA NA chr5-510 chr5 97275183 97275415 + 4.76 0.000 Intergenic AluY|SINE|Alu -92052 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr8-488 chr8 42458505 42458737 + 4.76 0.000 intron (NM_006749, intron 5 of 10) AluJr|SINE|Alu 42610 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr10-751 chr10 96766940 96767172 + 4.76 0.000 Intergenic AluY|SINE|Alu 16790 NR_026712 728658 Hs.645344 NR_026712 ENSG00000236552 RPL13AP5 RPL13A_8_1086|bA196N24.2 ribosomal protein L13a pseudogene 5 pseudo chr1-1006 chr1 197939716 197939948 + 4.76 0.000 Intergenic L1PA13|LINE|L1 22460 NM_001370213 56956 Hs.442578 NM_020204 ENSG00000143355 LHX9 - LIM homeobox 9 protein-coding chr13-214 chr13 33298094 33298326 + 4.76 0.000 intron (NM_001243476, intron 5 of 17) AluSz|SINE|Alu -12455 NM_178006 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr3-535 chr3 119684300 119684532 + 4.76 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -7020 NM_005694 10063 Hs.534383 NM_005694 ENSG00000138495 COX17 - cytochrome c oxidase copper chaperone COX17 protein-coding chr12-359 chr12 85064004 85064236 + 4.56 0.000 intron (NM_001079910, intron 8 of 26) L1MA3|LINE|L1 27769 NM_001079910 84125 Hs.402200 NM_032165 ENSG00000133640 LRRIQ1 - leucine rich repeats and IQ motif containing 1 protein-coding chr6-564 chr6 87066465 87066697 + 4.56 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 28525 NM_000735 1081 Hs.119689 NM_000735 ENSG00000135346 CGA CG-ALPHA|FSHA|GPA1|GPHA1|GPHa|HCG|LHA|TSHA glycoprotein hormones, alpha polypeptide protein-coding chr5-147 chr5 11487 11719 + 4.56 0.000 Intergenic (TAACCC)n|Simple_repeat|Simple_repeat -80565 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr8-324 chr8 80438689 80438921 + 4.56 0.000 Intergenic AluSz6|SINE|Alu -46788 NM_001277145 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr13-97 chr13 92051094 92051326 + 4.56 0.000 intron (NM_004466, intron 6 of 7) AluSc|SINE|Alu 300997 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr15-467 chr15 90867749 90867981 + 4.56 0.000 promoter-TSS (NM_002569) promoter-TSS (NM_002569) -723 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr17-715 chr17 3574801 3575033 + 4.56 0.000 intron (NM_018727, intron 12 of 15) AluSx|SINE|Alu -17105 NM_001258205 162514 Hs.446255 NM_145068 ENSG00000167723 TRPV3 FNEPPK2|OLMS|VRL3 transient receptor potential cation channel subfamily V member 3 protein-coding ML143345.1-7 ML143345.1 64904 65136 + 4.56 0.000 NA NA NA NA chr3-913 chr3 186645652 186645884 + 4.56 0.000 intron (NM_001308079, intron 2 of 4) AluSc5|SINE|Alu 5369 NM_001308079 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr8-471 chr8 30967271 30967503 + 4.56 0.000 Intergenic MADE1|DNA|TcMar-Mariner -54379 NM_001350162 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr2-391 chr2 84450309 84450541 + 4.56 0.000 intron (NM_003849, intron 1 of 8) (A)n|Simple_repeat|Simple_repeat 8855 NM_003849 8802 Hs.270428 NM_003849 ENSG00000163541 SUCLG1 GALPHA|MTDPS9|SUCLA1 succinate-CoA ligase alpha subunit protein-coding chr4-540 chr4 39520968 39521200 + 4.36 0.000 intron (NM_001184701, intron 1 of 10) AluSx1|SINE|Alu 6355 NM_001184700 7358 Hs.572518 NM_003359 ENSG00000109814 UGDH GDH|UDP-GlcDH|UDPGDH|UGD UDP-glucose 6-dehydrogenase protein-coding chr18-109 chr18 76851155 76851387 + 4.36 0.000 intron (NM_001306089, intron 2 of 30) AluSz6|SINE|Alu 27111 NM_007345 7776 Hs.719137 NM_007345 ENSG00000130856 ZNF236 ZNF236A|ZNF236B zinc finger protein 236 protein-coding chr16-683 chr16 83203561 83203793 + 4.36 0.000 intron (NM_001220490, intron 3 of 12) AluY|SINE|Alu -213379 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA chr10-477 chr10 94577971 94578203 + 4.36 0.000 intron (NM_001289074, intron 11 of 22) AluYb8|SINE|Alu 32299 NM_001289068 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr2-562 chr2 211669108 211669340 + 4.36 0.000 intron (NM_001042599, intron 14 of 26) AluSz|SINE|Alu 757136 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr8-388 chr8 37811029 37811261 + 4.36 0.000 intron (NM_032777, intron 1 of 18) intron (NM_032777, intron 1 of 18) 14262 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr1-1117 chr1 54948620 54948852 + 4.36 0.000 Intergenic AluY|SINE|Alu -31892 NM_182532 199964 Hs.663950 NM_182532 ENSG00000143001 TMEM61 - transmembrane protein 61 protein-coding chr3-668 chr3 139004371 139004603 + 4.36 0.000 3' UTR (NM_001134659, exon 1 of 1) 3' UTR (NM_001134659, exon 1 of 1) 1781 NM_001134659 729627 Hs.121314 NM_001134659 ENSG00000206260 PRR23A - proline rich 23A protein-coding chr17-663 chr17 73210661 73210893 + 4.36 0.000 intron (NM_001289410, intron 1 of 1) AluJo|SINE|Alu 16940 NM_001289412 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A - family with sequence similarity 104 member A protein-coding chr6-353 chr6 57063339 57063571 + 4.36 0.000 Intergenic AluSz|SINE|Alu 16708 NM_001286276 57691 Hs.709521 NM_020931 ENSG00000168116 KIAA1586 - KIAA1586 protein-coding chr14-225 chr14 74677391 74677623 + 4.36 0.000 intron (NM_001039479, intron 5 of 19) AluSx4|SINE|Alu 35573 NM_001039479 9870 Hs.497417 NM_014821 ENSG00000119682 AREL1 FIEL1|KIAA0317 apoptosis resistant E3 ubiquitin protein ligase 1 protein-coding chr9-706 chr9 130399038 130399270 + 4.36 0.000 intron (NM_001291815, intron 75 of 97) AluJr|SINE|Alu -45553 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr11-657 chr11 130028552 130028784 + 4.36 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -25833 NM_001367893 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7|TRIS PR/SET domain 10 protein-coding chr12-455 chr12 106035294 106035526 + 4.36 0.000 Intergenic Intergenic 104623 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr10-369 chr10 23420212 23420444 + 4.36 0.000 Intergenic AluSx|SINE|Alu -18941 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr21-106 chr21 14146650 14146882 + 4.16 0.000 intron (NM_198996, intron 8 of 9) L2a|LINE|L2 60183 NM_198996 149998 Hs.139907 NM_145317 ENSG00000188992 LIPI CT17|LPDL|PLA1C|PRED5|mPA-PLA1 beta lipase I protein-coding chr8-408 chr8 108400640 108400872 + 4.16 0.000 Intergenic AluSz|SINE|Alu -42827 NR_138033 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr10-390 chr10 94342638 94342870 + 4.16 0.000 intron (NM_022451, intron 13 of 20) L1MC4a|LINE|L1 20185 NM_022451 64318 Hs.74899 NM_022451 ENSG00000173145 NOC3L AD24|C10orf117|FAD24 NOC3 like DNA replication regulator protein-coding chr4-394 chr4 162092835 162093067 + 4.16 0.000 intron (NM_020116, intron 2 of 15) AluSg|SINE|Alu 70218 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr4-332 chr4 12027086 12027318 + 4.16 0.000 Intergenic AluY|SINE|Alu -196249 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA chr1-1296 chr1 27036385 27036617 + 4.16 0.000 Intergenic AluSx3|SINE|Alu -23651 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr4-436 chr4 57221833 57222065 + 4.16 0.000 Intergenic AluJr|SINE|Alu -111564 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chrX-186 chrX 119455593 119455825 + 3.96 0.000 Intergenic AluSx1|SINE|Alu 12553 NR_134915 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr11-939 chr11 100083181 100083413 + 3.96 0.000 intron (NM_001243270, intron 12 of 23) AluSq|SINE|Alu 527152 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr2-1109 chr2 207741735 207741967 + 3.96 0.000 intron (NM_001330218, intron 6 of 9) AluSx3|SINE|Alu -12956 NR_039934 100616361 NR_039934 ENSG00000284079 MIR4775 - microRNA 4775 ncRNA chr10-758 chr10 100358493 100358725 + 3.96 0.000 intron (NM_005063, intron 5 of 5) AluYb8|SINE|Alu 11376 NM_005063 6319 Hs.558396 NM_005063 ENSG00000099194 SCD FADS5|MSTP008|SCD1|SCDOS|hSCD1 stearoyl-CoA desaturase protein-coding chr3-649 chr3 94038432 94038664 + 3.96 0.000 intron (NR_135621, intron 4 of 8) AluSq2|SINE|Alu -9951 NM_001001850 415117 Hs.679768 NM_001001850 ENSG00000178750 STX19 - syntaxin 19 protein-coding chr10-649 chr10 35896529 35896761 + 3.96 0.000 Intergenic Intergenic 118343 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA KI270438.1-8 KI270438.1 46607 46839 + 3.96 0.000 NA NA NA NA ML143345.1-10 ML143345.1 17954 18186 + 3.96 0.000 NA NA NA NA chr10-761 chr10 101184667 101184899 + 3.96 0.000 intron (NR_120620, intron 3 of 5) HERVH-int|LTR|ERV1 8461 NR_120620 101927396 Hs.551648 NR_120620 ENSG00000237579 LINC01514 - long intergenic non-protein coding RNA 1514 ncRNA chr8-477 chr8 35558027 35558259 + 3.96 0.000 intron (NM_001322818, intron 2 of 16) AluSq2|SINE|Alu 13751 NM_001322818 137970 Hs.238889 NM_080872 ENSG00000156687 UNC5D PRO34692|Unc5h4 unc-5 netrin receptor D protein-coding chr20-230 chr20 44353329 44353561 + 3.76 0.000 Intergenic AluSq2|SINE|Alu -2254 NM_001287182 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding KQ031384.1-4 KQ031384.1 462392 462624 + 3.76 0.000 NA NA NA NA chr10-402 chr10 115081605 115081837 + 3.76 0.000 Intergenic AluYa5|SINE|Alu -11644 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr10-563 chr10 86620051 86620283 + 3.57 0.000 Intergenic AluJb|SINE|Alu -34380 NM_033282 94233 Hs.283922 NM_033282 ENSG00000122375 OPN4 MOP opsin 4 protein-coding chr7-739 chr7 57176664 57176896 + 3.57 0.000 intron (NR_030766, intron 3 of 3) AluSx1|SINE|Alu 3376 NR_030766 642006 Hs.562648 NR_030766 GUSBP10 - GUSB pseudogene 10 pseudo chr4-431 chr4 49139602 49139834 + 3.37 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 153076 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chrX-167 chrX 26980868 26981100 + 2.77 0.000 Intergenic L1PB4|LINE|L1 422647 NR_001559 139538 Hs.447377 NR_001559 ENSG00000259849 VENTXP1 CT18|NA88A|VENTX2P1 VENT homeobox pseudogene 1 pseudo