PeakID (cmd=annotatePeaks.pl diffpeaks_462_vs_394.txt hg38 -raw) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type KI270467.1-1 KI270467.1 2215 2459 + 810.6 0.000 NA NA NA NA KI270467.1-2 KI270467.1 3295 3539 + 769.3 0.000 NA NA NA NA ML143380.1-1 ML143380.1 79722 79966 + 357.1 0.000 NA NA NA NA KI270466.1-1 KI270466.1 967 1211 + 260.5 0.000 NA NA NA NA chr21-1 chr21 8234376 8234620 + 232.5 0.000 intron (NR_003287, intron 1 of 2) (TCTC)n|Simple_repeat|Simple_repeat -15007 NR_128716 103504739 NR_128716 ENSG00000277379 MIR6724-3 hsa-mir-6724-3 microRNA 6724-3 ncRNA chr12-1 chr12 17282247 17282491 + 227.0 0.000 Intergenic L1PB1|LINE|L1 293622 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo ML143380.1-2 ML143380.1 79044 79288 + 205.3 0.000 NA NA NA NA chr3-1 chr3 93470476 93470720 + 152.6 0.000 Intergenic SAR|Satellite|Satellite 503483 NM_001314077 5627 Hs.64016 NM_000313 ENSG00000184500 PROS1 PROS|PS21|PS22|PS23|PS24|PS25|PSA|THPH5|THPH6 protein S protein-coding chr8-1 chr8 102239211 102239455 + 151.8 0.000 promoter-TSS (NM_001172478) promoter-TSS (NM_001172478) -118 NR_125415 101927221 Hs.492445 NR_125415 ENSG00000246263 UBR5-AS1 - UBR5 antisense RNA 1 ncRNA chrX-1 chrX 16786180 16786424 + 144.5 0.000 promoter-TSS (NM_018360) promoter-TSS (NM_018360) -130 NM_001168683 55787 Hs.555961 NM_018360 ENSG00000086712 TXLNG CXorf15|ELRG|FIAT|LSR5|TXLNGX taxilin gamma protein-coding KI270438.1-1 KI270438.1 109322 109566 + 138.8 0.000 NA NA NA NA chr3-6 chr3 41962162 41962406 + 129.4 0.000 promoter-TSS (NM_001322500) promoter-TSS (NM_001322500) -181 NM_001322501 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding chr10-1 chr10 123154200 123154444 + 129.3 0.000 promoter-TSS (NM_001007793) promoter-TSS (NM_001007793) 78 NM_001007793 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding chr17-3 chr17 28951595 28951839 + 128.2 0.000 promoter-TSS (NM_020889) promoter-TSS (NM_020889) -199 NM_020889 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr14-4 chr14 91060686 91060930 + 127.8 0.000 promoter-TSS (NM_001322234) promoter-TSS (NM_001322234) -159 NM_182398 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding KI270438.1-2 KI270438.1 103980 104224 + 125.3 0.000 NA NA NA NA chr19-15 chr19 20052150 20052394 + 123.1 0.000 Intergenic CpG -12767 NM_033196 91120 Hs.306298 NM_033196 ENSG00000197124 ZNF682 BC39498_3 zinc finger protein 682 protein-coding chr12-4 chr12 55973670 55973914 + 122.8 0.000 promoter-TSS (NM_001252037) promoter-TSS (NM_001252037) -121 NM_001252036 5869 Hs.157659 NM_002868 ENSG00000111540 RAB5B - RAB5B, member RAS oncogene family protein-coding chr1-4 chr1 206203045 206203289 + 122.5 0.000 promoter-TSS (NR_134239) promoter-TSS (NR_134239) -292 NM_001123168 729533 Hs.339665 NM_001123168 ENSG00000196550 FAM72A LMPIP|Ugene|p17 family with sequence similarity 72 member A protein-coding chr5-2 chr5 49658986 49659230 + 122.5 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 782180 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr11-15 chr11 123062281 123062525 + 122.0 0.000 promoter-TSS (NM_153201) promoter-TSS (NM_153201) -267 NM_006597 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr19-18 chr19 7829721 7829965 + 120.4 0.000 promoter-TSS (NM_145245) promoter-TSS (NM_145245) -375 NM_145245 115704 Hs.26870 NM_145245 ENSG00000142459 EVI5L - ecotropic viral integration site 5 like protein-coding chr19-21 chr19 18522268 18522512 + 116.3 0.000 promoter-TSS (NM_006532) promoter-TSS (NM_006532) -320 NM_006532 8178 Hs.515260 NM_006532 ENSG00000105656 ELL C19orf17|ELL1|MEN|PPP1R68 elongation factor for RNA polymerase II protein-coding chr16-7 chr16 34588085 34588329 + 116.1 0.000 Intergenic Intergenic -206727 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr13-2 chr13 97433053 97433297 + 116.0 0.000 promoter-TSS (NM_021033) promoter-TSS (NM_021033) -994 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr11-20 chr11 59615922 59616166 + 113.2 0.000 promoter-TSS (NM_002556) promoter-TSS (NM_002556) -270 NM_002556 5007 Hs.597091 NM_002556 ENSG00000110048 OSBP OSBP1 oxysterol binding protein protein-coding chr19-4 chr19 49766430 49766674 + 113.2 0.000 promoter-TSS (NM_014203) promoter-TSS (NM_014203) -449 NM_130787 160 Hs.467125 NM_014203 ENSG00000196961 AP2A1 ADTAA|AP2-ALPHA|CLAPA1 adaptor related protein complex 2 subunit alpha 1 protein-coding chr13-1 chr13 110715521 110715765 + 112.9 0.000 exon (NM_005537, exon 1 of 2) intron (NM_001267728, intron 1 of 1) 206 NM_001267728 3621 Hs.46700 NM_005537 ENSG00000153487 ING1 p24ING1c|p33|p33ING1|p33ING1b|p47|p47ING1a inhibitor of growth family member 1 protein-coding chr12-2 chr12 54279584 54279828 + 112.9 0.000 TTS (NR_157844) TTS (NR_157844) 416 NM_012117 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr19-17 chr19 3626891 3627135 + 109.6 0.000 promoter-TSS (NM_021231) promoter-TSS (NM_021231) -198 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr11-18 chr11 13668439 13668683 + 107.5 0.000 promoter-TSS (NM_032228) promoter-TSS (NM_032228) -107 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding chr17-13 chr17 59155456 59155700 + 107.4 0.000 promoter-TSS (NM_018304) promoter-TSS (NM_018304) -168 NM_018304 55771 Hs.631750 NM_018304 ENSG00000068489 PRR11 - proline rich 11 protein-coding chr16-8 chr16 87951076 87951320 + 105.5 0.000 promoter-TSS (NM_079837) promoter-TSS (NM_079837) -236 NM_079837 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr16-6 chr16 53503321 53503565 + 104.9 0.000 promoter-TSS (NM_001012398) promoter-TSS (NM_001012398) -139 NM_001308325 64400 Hs.380897 NM_022476 ENSG00000166971 AKTIP FT1|FTS AKT interacting protein protein-coding chr19-16 chr19 8525790 8526034 + 104.0 0.000 intron (NM_012335, intron 24 of 27) intron (NM_012335, intron 24 of 27) -11745 NM_001146175 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr7-9 chr7 149028527 149028771 + 104.0 0.000 promoter-TSS (NR_163906) promoter-TSS (NR_163906) -144 NM_001371245 chr11-5 chr11 695086 695330 + 103.7 0.000 promoter-TSS (NM_174940) promoter-TSS (NM_174940) -383 NM_001276253 283232 Hs.448664 NM_174940 ENSG00000177042 TMEM80 - transmembrane protein 80 protein-coding chr19-29 chr19 12736957 12737201 + 103.7 0.000 promoter-TSS (NM_004317) promoter-TSS (NM_004317) -418 NM_004317 439 Hs.465985 NM_004317 ENSG00000198356 GET3 ARSA-I|ARSA1|ASNA-I|ASNA1|TRC40 guided entry of tail-anchored proteins factor 3, ATPase protein-coding chr17-15 chr17 81860729 81860973 + 102.8 0.000 promoter-TSS (NM_000918) promoter-TSS (NM_000918) -316 NM_000918 5034 Hs.464336 NM_000918 ENSG00000185624 P4HB CLCRP1|DSI|ERBA2L|GIT|P4Hbeta|PDI|PDIA1|PHDB|PO4DB|PO4HB|PROHB prolyl 4-hydroxylase subunit beta protein-coding chr8-3 chr8 73972198 73972442 + 102.8 0.000 promoter-TSS (NM_001204864) promoter-TSS (NM_001204864) -33 NM_001204860 6921 Hs.533437 NM_005648 ENSG00000154582 ELOC SIII|TCEB1 elongin C protein-coding chr3-11 chr3 36993188 36993432 + 102.5 0.000 promoter-TSS (NM_000249) promoter-TSS (NM_000249) -40 NM_001354630 4292 Hs.195364 NM_000249 ENSG00000076242 MLH1 COCA2|FCC2|HNPCC|HNPCC2|hMLH1 mutL homolog 1 protein-coding chr3-3 chr3 130111845 130112089 + 102.2 0.000 promoter-TSS (NR_024252) promoter-TSS (NR_024252) 260 NR_146653 105374104 Hs.587226 NR_146653 ENSG00000249846 LINC02021 - long intergenic non-protein coding RNA 2021 ncRNA chr17-4 chr17 82458491 82458735 + 101.9 0.000 promoter-TSS (NM_001083608) promoter-TSS (NM_001083608) -51 NM_031968 26502 Hs.256526 NM_012336 ENSG00000141562 NARF IOP2 nuclear prelamin A recognition factor protein-coding chr16-10 chr16 28950663 28950907 + 101.6 0.000 promoter-TSS (NM_032815) promoter-TSS (NM_032815) -212 NM_032815 84901 Hs.513470 NM_032815 ENSG00000176953 NFATC2IP ESC2|NIP45|RAD60 nuclear factor of activated T cells 2 interacting protein protein-coding chr2-8 chr2 62705331 62705575 + 100.9 0.000 promoter-TSS (NM_001354221) promoter-TSS (NM_001354221) -171 NM_001354212 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr9-7 chr9 124297592 124297836 + 100.4 0.000 intron (NM_001166171, intron 2 of 10) intron (NM_001166171, intron 2 of 10) 5294 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr11-22 chr11 108222807 108223051 + 100.2 0.000 promoter-TSS (NM_002519) promoter-TSS (NM_002519) 97 NM_001351835 472 Hs.367437 NM_000051 ENSG00000149311 ATM AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1 ATM serine/threonine kinase protein-coding chr19-13 chr19 8390100 8390344 + 99.5 0.000 promoter-TSS (NR_049795) promoter-TSS (NR_049795) -138 NM_004218 9230 Hs.558403 NM_004218 ENSG00000185236 RAB11B H-YPT3|NDAGSCW RAB11B, member RAS oncogene family protein-coding chr11-24 chr11 125111682 125111926 + 99.3 0.000 promoter-TSS (NR_047588) promoter-TSS (NR_047588) -41 NR_047587 219854 Hs.7626 NM_001080546 ENSG00000150433 TMEM218 - transmembrane protein 218 protein-coding chr11-21 chr11 125592537 125592781 + 99.2 0.000 promoter-TSS (NM_001278504) promoter-TSS (NM_001278504) -91 NR_132372 105369550 Hs.732083 NR_132372 ENSG00000149557 STT3A-AS1 - STT3A antisense RNA 1 ncRNA chr3-7 chr3 186109114 186109358 + 99.2 0.000 promoter-TSS (NM_004454) promoter-TSS (NM_004454) -147 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding KI270438.1-3 KI270438.1 104753 104997 + 98.4 0.000 NA NA NA NA chr1-13 chr1 150561380 150561624 + 97.4 0.000 TTS (NM_001288607) TTS (NM_001288607) 9573 NR_036211 100422997 NR_036211 ENSG00000264553 MIR4257 - microRNA 4257 ncRNA chr6-2 chr6 52284885 52285129 + 96.9 0.000 promoter-TSS (NM_001366371) promoter-TSS (NM_001366371) -265 NM_001366374 4172 Hs.179565 NM_002388 ENSG00000112118 MCM3 HCC5|P1-MCM3|P1.h|RLFB minichromosome maintenance complex component 3 protein-coding chr19-56 chr19 37317672 37317916 + 96.5 0.000 promoter-TSS (NM_001329766) promoter-TSS (NM_001329766) -88 NR_138108 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr11-14 chr11 64778609 64778853 + 96.3 0.000 promoter-TSS (NM_001346409) promoter-TSS (NM_001346409) 113 NM_201997 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr19-19 chr19 16111546 16111790 + 95.6 0.000 promoter-TSS (NM_005370) promoter-TSS (NM_005370) -221 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding chr11-28 chr11 75814966 75815210 + 94.3 0.000 promoter-TSS (NR_144531) promoter-TSS (NR_144531) -122 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr7-4 chr7 100538952 100539196 + 93.4 0.000 promoter-TSS (NM_006076) promoter-TSS (NM_006076) -129 NM_006076 3268 Hs.521083 NM_006076 ENSG00000106351 AGFG2 HRBL|RABR ArfGAP with FG repeats 2 protein-coding chr5-8 chr5 109409991 109410235 + 93.3 0.000 promoter-TSS (NM_014819) promoter-TSS (NM_014819) -139 NM_014819 9867 Hs.483036 NM_014819 ENSG00000198961 PJA2 Neurodap1|RNF131 praja ring finger ubiquitin ligase 2 protein-coding chr10-5 chr10 16817382 16817626 + 93.1 0.000 promoter-TSS (NM_012425) promoter-TSS (NM_012425) -50 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr3-9 chr3 131381571 131381815 + 92.7 0.000 promoter-TSS (NM_152395) promoter-TSS (NM_152395) 22 NM_001171905 131870 Hs.282050 NM_152395 ENSG00000198585 NUDT16 - nudix hydrolase 16 protein-coding chr2-5 chr2 3518944 3519188 + 91.8 0.000 intron (NM_018269, intron 1 of 3) CpG 465 NM_018269 55256 Hs.502773 NM_018269 ENSG00000182551 ADI1 APL1|ARD|Fe-ARD|HMFT1638|MTCBP1|Ni-ARD|SIPL|mtnD acireductone dioxygenase 1 protein-coding chr14-8 chr14 73026988 73027232 + 91.0 0.000 promoter-TSS (NM_001281734) promoter-TSS (NM_001281734) -4 NM_001281734 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding chr3-13 chr3 179562764 179563008 + 90.9 0.000 promoter-TSS (NM_178042) promoter-TSS (NM_178042) 6 NM_177989 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding chr19-63 chr19 44401400 44401644 + 90.9 0.000 promoter-TSS (NM_001291488) promoter-TSS (NM_001291488) 86 NM_001291488 26974 Hs.709428 NM_152354 ENSG00000267508 ZNF285 ZNF285A zinc finger protein 285 protein-coding chr1-34 chr1 110338902 110339146 + 90.7 0.000 promoter-TSS (NM_001201545) promoter-TSS (NM_001201545) 147 NR_036595 440600 Hs.649375 NR_036595 ENSG00000227963 RBM15-AS1 AS-RBM15 RBM15 antisense RNA 1 ncRNA chr10-10 chr10 102502752 102502996 + 89.1 0.000 promoter-TSS (NM_005736) promoter-TSS (NM_005736) -162 NM_005736 10121 Hs.153961 NM_005736 ENSG00000138107 ACTR1A ARP1|Arp1A|CTRN1 actin related protein 1A protein-coding chr5-16 chr5 178153875 178154119 + 88.5 0.000 promoter-TSS (NM_001034833) promoter-TSS (NM_001034833) -37 NM_017838 55651 Hs.744074 NM_017838 ENSG00000145912 NHP2 DKCB2|NHP2P|NOLA2 NHP2 ribonucleoprotein protein-coding chr4-3 chr4 3955584 3955828 + 88.3 0.000 promoter-TSS (NR_130740) promoter-TSS (NR_130740) -278 NR_130742 348926 Hs.591720 NR_024253 ENSG00000251669 FAM86EP - family with sequence similarity 86, member A pseudogene pseudo chr16-14 chr16 68448491 68448735 + 88.3 0.000 promoter-TSS (NM_018667) promoter-TSS (NM_018667) -105 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr19-24 chr19 15418980 15419224 + 87.5 0.000 promoter-TSS (NR_111971) promoter-TSS (NR_111971) -114 NR_111971 26993 Hs.399800 NM_014371 ENSG00000011243 AKAP8L HA95|HAP95|NAKAP|NAKAP95 A-kinase anchoring protein 8 like protein-coding chr3-21 chr3 93979936 93980180 + 87.4 0.000 promoter-TSS (NM_001174150) promoter-TSS (NM_001174150) -81 NM_001174151 200894 Hs.533086 NM_144996 ENSG00000169379 ARL13B ARL2L1|JBTS8 ADP ribosylation factor like GTPase 13B protein-coding chr19-42 chr19 39411881 39412125 + 86.2 0.000 promoter-TSS (NM_001351693) promoter-TSS (NM_001351693) -666 NM_001351693 64857 Hs.631574 NM_022835 ENSG00000090924 PLEKHG2 ARHGEF42|CLG|CTB-60E11.4|LDAMD pleckstrin homology and RhoGEF domain containing G2 protein-coding chr12-6 chr12 49110720 49110964 + 86.0 0.000 promoter-TSS (NM_001300750) promoter-TSS (NM_001300750) 58 NM_001300750 55716 Hs.272838 NM_018113 ENSG00000139636 LMBR1L LIMR limb development membrane protein 1 like protein-coding chr16-41 chr16 57735343 57735587 + 85.9 0.000 promoter-TSS (NM_005886) promoter-TSS (NM_005886) -305 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr3-4 chr3 38024937 38025181 + 85.9 0.000 promoter-TSS (NR_024071) promoter-TSS (NR_024071) -539 NM_001130964 5333 Hs.80776 NM_006225 ENSG00000187091 PLCD1 NDNC3|PLC-III phospholipase C delta 1 protein-coding chr4-9 chr4 49657503 49657747 + 85.6 0.000 Intergenic (GAATG)n|Satellite|Satellite 670983 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr9-10 chr9 137200781 137201025 + 85.3 0.000 promoter-TSS (NM_001128228) promoter-TSS (NM_001128228) -162 NM_001128228 286262 Hs.323445 NM_173691 ENSG00000176058 TPRN C9orf75|DFNB79 taperin protein-coding chr1-47 chr1 150568542 150568786 + 85.0 0.000 intron (NR_104133, intron 2 of 3) intron (NR_104133, intron 2 of 3) 5888 NR_104133 574406 Hs.516243 NM_001025493 ENSG00000203804 ADAMTSL4-AS1 C1orf138 ADAMTSL4 antisense RNA 1 ncRNA chr7-29 chr7 151028243 151028487 + 84.7 0.000 promoter-TSS (NM_007188) promoter-TSS (NM_007188) -57 NM_001282293 11194 Hs.647118 NM_007188 ENSG00000197150 ABCB8 EST328128|M-ABC1|MABC1 ATP binding cassette subfamily B member 8 protein-coding chr11-42 chr11 4608101 4608345 + 84.5 0.000 promoter-TSS (NM_001304496) promoter-TSS (NM_001304496) 8 NM_018073 55128 Hs.523438 NM_018073 ENSG00000167333 TRIM68 GC109|RNF137|SS-56|SS56 tripartite motif containing 68 protein-coding chr4-7 chr4 37686488 37686732 + 84.4 0.000 promoter-TSS (NM_001085399) promoter-TSS (NM_001085399) -234 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr7-3 chr7 66628673 66628917 + 83.8 0.000 promoter-TSS (NM_153033) promoter-TSS (NM_153033) -86 NM_001167961 154881 Hs.546627 NM_153033 ENSG00000243335 KCTD7 CLN14|EPM3 potassium channel tetramerization domain containing 7 protein-coding chr10-12 chr10 132065840 132066084 + 83.6 0.000 promoter-TSS (NM_001323090) promoter-TSS (NM_001323090) 16 NM_001323088 282973 Hs.106254 NM_194303 ENSG00000188385 JAKMIP3 C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5 Janus kinase and microtubule interacting protein 3 protein-coding chr6-9 chr6 42984450 42984694 + 82.9 0.000 promoter-TSS (NM_180977) promoter-TSS (NM_180977) 2 NM_180976 5528 Hs.533308 NM_006245 ENSG00000112640 PPP2R5D B56D|B56delta|MRD35 protein phosphatase 2 regulatory subunit B'delta protein-coding chr19-62 chr19 41263782 41264026 + 82.7 0.000 promoter-TSS (NM_001321208) promoter-TSS (NM_001321208) -468 NM_001321208 11100 Hs.155218 NM_007040 ENSG00000105323 HNRNPUL1 E1B-AP5|E1BAP5|HNRPUL1 heterogeneous nuclear ribonucleoprotein U like 1 protein-coding chr19-92 chr19 49869467 49869711 + 82.4 0.000 3' UTR (NM_001278160, exon 5 of 5) 3' UTR (NM_001278160, exon 5 of 5) -2013 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding chr6-1 chr6 20212513 20212757 + 82.3 0.000 promoter-TSS (NM_001080480) promoter-TSS (NM_001080480) -166 NM_001080480 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr2-18 chr2 175168257 175168501 + 81.8 0.000 promoter-TSS (NR_030630) promoter-TSS (NR_030630) -173 NM_001256094 1386 Hs.592510 NM_001880 ENSG00000115966 ATF2 CRE-BP1|CREB-2|CREB2|HB16|TREB7 activating transcription factor 2 protein-coding chr11-50 chr11 6234809 6235053 + 81.5 0.000 promoter-TSS (NM_001098794) promoter-TSS (NM_001098794) -295 NM_032127 84067 Hs.501793 NM_032127 ENSG00000051009 FAM160A2 C11orf56|FHIP family with sequence similarity 160 member A2 protein-coding chr9-19 chr9 133030613 133030857 + 81.2 0.000 promoter-TSS (NR_135119) promoter-TSS (NR_135119) 60 NM_001286709 9328 Hs.495417 NM_012087 ENSG00000148308 GTF3C5 TFIIIC63|TFIIICepsilon|TFiiiC2-63 general transcription factor IIIC subunit 5 protein-coding chr11-69 chr11 62841343 62841587 + 80.9 0.000 intron (NM_001369451, intron 1 of 11) intron (NM_001369451, intron 1 of 11) 344 NM_001369451 54663 Hs.654620 NM_018093 ENSG00000133316 WDR74 Nsa1 WD repeat domain 74 protein-coding chr1-15 chr1 85276530 85276774 + 80.9 0.000 promoter-TSS (NM_003921) promoter-TSS (NM_003921) -20 NM_001320715 8915 Hs.193516 NM_003921 ENSG00000142867 BCL10 CARMEN|CIPER|CLAP|IMD37|c-E10|mE10 BCL10 immune signaling adaptor protein-coding chr9-14 chr9 35072584 35072828 + 80.7 0.000 promoter-TSS (NM_007126) promoter-TSS (NM_007126) -38 NM_001354927 7415 Hs.529782 NM_007126 ENSG00000165280 VCP CDC48|TERA|p97 valosin containing protein protein-coding chr19-53 chr19 42242615 42242859 + 80.6 0.000 promoter-TSS (NM_019884) promoter-TSS (NM_019884) -135 NM_019884 2931 Hs.466828 NM_019884 ENSG00000105723 GSK3A - glycogen synthase kinase 3 alpha protein-coding chr11-34 chr11 14892164 14892408 + 80.4 0.000 promoter-TSS (NM_024514) promoter-TSS (NM_024514) -81 NM_024514 120227 Hs.371427 NM_024514 ENSG00000186104 CYP2R1 - cytochrome P450 family 2 subfamily R member 1 protein-coding chr16-27 chr16 4802744 4802988 + 80.3 0.000 promoter-TSS (NM_024589) promoter-TSS (NM_024589) 84 NM_024589 79641 Hs.459795 NM_024589 ENSG00000067836 ROGDI KTZS rogdi atypical leucine zipper protein-coding chr7-27 chr7 128739136 128739380 + 80.0 0.000 promoter-TSS (NM_001219) promoter-TSS (NM_001219) -101 NM_001130674 813 Hs.7753 NM_001219 ENSG00000128595 CALU - calumenin protein-coding chr6-4 chr6 116616198 116616442 + 79.7 0.000 promoter-TSS (NM_001161664) promoter-TSS (NM_001161664) -159 NM_001010892 345895 Hs.160380 NM_001010892 ENSG00000111834 RSPH4A CILD11|RSHL3|RSPH6B|dJ412I7.1 radial spoke head component 4A protein-coding chr16-23 chr16 77190765 77191009 + 79.5 0.000 promoter-TSS (NM_001286639) promoter-TSS (NM_001286639) -303 NM_001286639 22879 Hs.513743 NM_014940 ENSG00000103111 MON1B HSRG1|SAND2|SRG1 MON1 homolog B, secretory trafficking associated protein-coding chr12-23 chr12 132908538 132908782 + 79.2 0.000 Intergenic CpG 20818 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA chr11-25 chr11 3797616 3797860 + 78.9 0.000 promoter-TSS (NM_001365127) promoter-TSS (NM_001365127) 14 NM_001256235 27315 Hs.133968 NM_014489 ENSG00000148985 PGAP2 CWH43-N|FRAG1|HPMRS3|MRT17|MRT21 post-GPI attachment to proteins 2 protein-coding chr12-19 chr12 52069644 52069888 + 78.8 0.000 promoter-TSS (NM_021934) promoter-TSS (NM_021934) -208 NM_021934 60673 Hs.9911 NM_021934 ENSG00000123395 ATG101 C12orf44 autophagy related 101 protein-coding chr7-10 chr7 1537249 1537493 + 78.8 0.000 intron (NM_002360, intron 1 of 2) intron (NM_002360, intron 1 of 2) -2491 NR_149036 100128653 Hs.656985 NR_149036 LOC100128653 - uncharacterized LOC100128653 ncRNA chr1-38 chr1 150697161 150697405 + 78.6 0.000 promoter-TSS (NM_018178) promoter-TSS (NM_018178) -129 NM_018178 55204 Hs.203699 NM_018178 ENSG00000143457 GOLPH3L GPP34R golgi phosphoprotein 3 like protein-coding chr1-32 chr1 150163186 150163430 + 78.5 0.000 intron (NR_135098, intron 1 of 3) intron (NR_135098, intron 1 of 3) 2580 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr19-33 chr19 17470152 17470396 + 78.3 0.000 promoter-TSS (NM_198580) promoter-TSS (NM_198580) -250 NM_198580 376497 Hs.363138 NM_198580 ENSG00000130304 SLC27A1 ACSVL5|FATP|FATP-1|FATP1 solute carrier family 27 member 1 protein-coding chr7-21 chr7 77696270 77696514 + 78.0 0.000 promoter-TSS (NR_134251) promoter-TSS (NR_134251) -67 NM_198467 222194 Hs.72451 NM_198467 ENSG00000187257 RSBN1L - round spermatid basic protein 1 like protein-coding chr2-33 chr2 33599299 33599543 + 77.9 0.000 promoter-TSS (NM_001304538) promoter-TSS (NM_001304538) -59 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding chr7-60 chr7 135509885 135510129 + 77.7 0.000 promoter-TSS (NM_001190847) promoter-TSS (NM_001190847) 95 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding chr7-37 chr7 7640482 7640726 + 77.3 0.000 promoter-TSS (NM_001302348) promoter-TSS (NM_001302348) -148 NM_001302348 729852 Hs.652371 NM_001302348 ENSG00000219545 UMAD1 RPA3-AS1|RPA3OS UBAP1-MVB12-associated (UMA) domain containing 1 protein-coding chr5-15 chr5 146203333 146203577 + 77.1 0.000 promoter-TSS (NM_018989) promoter-TSS (NM_018989) -150 NM_018989 54439 Hs.61441 NM_018989 ENSG00000091009 RBM27 ARRS1|Psc1|ZC3H18|ZC3H20 RNA binding motif protein 27 protein-coding chr7-7 chr7 1160201 1160445 + 77.1 0.000 promoter-TSS (NM_001365383) promoter-TSS (NM_001365383) -51 NR_110069 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr1-24 chr1 113390073 113390317 + 76.7 0.000 promoter-TSS (NM_152900) promoter-TSS (NM_152900) -320 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding chr4-22 chr4 10106609 10106853 + 76.4 0.000 intron (NM_017491, intron 2 of 14) intron (NM_017491, intron 2 of 14) 10068 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr15-5 chr15 89088071 89088315 + 76.1 0.000 promoter-TSS (NM_152924) promoter-TSS (NM_152924) -263 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr14-5 chr14 99481103 99481347 + 75.9 0.000 promoter-TSS (NM_001099402) promoter-TSS (NM_001099402) -184 NM_001099402 8812 Hs.510409 NM_003858 ENSG00000090061 CCNK CPR4|IDDHDF cyclin K protein-coding chr10-11 chr10 56361347 56361591 + 75.8 0.000 promoter-TSS (NM_032997) promoter-TSS (NM_032997) -196 NM_001005413 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding chr4-8 chr4 51842928 51843172 + 75.6 0.000 promoter-TSS (NM_001287757) promoter-TSS (NM_001287757) 50 NM_001287757 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr2-25 chr2 63588636 63588880 + 75.4 0.000 promoter-TSS (NM_015910) promoter-TSS (NM_015910) -205 NM_001316374 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr9-12 chr9 92764930 92765174 + 75.4 0.000 promoter-TSS (NM_015250) promoter-TSS (NM_015250) -219 NM_001003800 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr19-30 chr19 48624048 48624292 + 75.4 0.000 promoter-TSS (NM_001204160) promoter-TSS (NM_001204160) -859 NM_001204160 56848 Hs.528006 NM_020126 ENSG00000063176 SPHK2 SK 2|SK-2|SPK 2|SPK-2 sphingosine kinase 2 protein-coding chr4-21 chr4 3292584 3292828 + 75.4 0.000 Intergenic CpG -21441 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr3-14 chr3 51941874 51942118 + 75.3 0.000 promoter-TSS (NM_005485) promoter-TSS (NM_005485) -92 NM_004704 9136 Hs.153768 NM_004704 ENSG00000114767 RRP9 RNU3IP2|U3-55K ribosomal RNA processing 9, U3 small nucleolar RNA binding protein protein-coding chr3-10 chr3 50292432 50292676 + 75.3 0.000 promoter-TSS (NM_006764) promoter-TSS (NM_006764) 41 NM_006764 7866 Hs.315177 NM_006764 ENSG00000214706 IFRD2 IFNRP|SKMc15|SM15 interferon related developmental regulator 2 protein-coding chr1-6 chr1 88992762 88993006 + 74.8 0.000 promoter-TSS (NM_001349448) promoter-TSS (NM_001349448) 76 NM_019610 494115 Hs.481898 NM_019610 ENSG00000213516 RBMXL1 RBM1 RBMX like 1 protein-coding chr3-33 chr3 88059002 88059246 + 74.5 0.000 promoter-TSS (NM_003663) promoter-TSS (NM_003663) -119 NM_001008390 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding chr19-89 chr19 56140904 56141148 + 74.5 0.000 promoter-TSS (NM_001253792) promoter-TSS (NM_001253792) -261 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr2-21 chr2 48314264 48314508 + 74.4 0.000 promoter-TSS (NM_002158) promoter-TSS (NM_002158) -296 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr1-33 chr1 26234114 26234358 + 74.4 0.000 promoter-TSS (NM_001281517) promoter-TSS (NM_001281517) 36 NM_001319944 64793 Hs.63795 NM_022778 ENSG00000130695 CEP85 CCDC21 centrosomal protein 85 protein-coding chr1-70 chr1 62436439 62436683 + 74.1 0.000 promoter-TSS (NM_003368) promoter-TSS (NM_003368) 257 NM_001017416 7398 Hs.35086 NM_003368 ENSG00000162607 USP1 UBP ubiquitin specific peptidase 1 protein-coding chr10-7 chr10 125231519 125231763 + 74.1 0.000 Intergenic Intergenic -70611 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr11-44 chr11 66616305 66616549 + 73.8 0.000 promoter-TSS (NM_001198845) promoter-TSS (NM_001198845) -155 NM_001198845 100526737 Hs.523822 NM_001198845 ENSG00000248643 RBM14-RBM4 COAZ|PSP2|RBM14|SIP RBM14-RBM4 readthrough protein-coding chr19-37 chr19 13156085 13156329 + 73.8 0.000 Intergenic CpG 5796 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr14-18 chr14 24442595 24442839 + 73.5 0.000 promoter-TSS (NM_001290293) promoter-TSS (NM_001290293) 84 NM_020195 56948 Hs.643552 NM_020195 ENSG00000100445 SDR39U1 C14orf124|HCDI short chain dehydrogenase/reductase family 39U member 1 protein-coding chr2-28 chr2 197500091 197500335 + 73.2 0.000 promoter-TSS (NM_001202485) promoter-TSS (NM_001202485) 61 NM_199440 3329 Hs.595053 NM_002156 ENSG00000144381 HSPD1 CPN60|GROEL|HLD4|HSP-60|HSP60|HSP65|HuCHA60|SPG13 heat shock protein family D (Hsp60) member 1 protein-coding chr7-18 chr7 7182305 7182549 + 73.0 0.000 promoter-TSS (NM_020156) promoter-TSS (NM_020156) -188 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr7-31 chr7 39949513 39949757 + 72.9 0.000 promoter-TSS (NR_158201) promoter-TSS (NR_158201) -216 NR_158201 112267983 Hs.587424 NR_158201 LOC112267983 - uncharacterized LOC112267983 ncRNA chr10-43 chr10 126867618 126867862 + 72.7 0.000 Intergenic MIRc|SINE|MIR -37669 NM_001290223 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr11-26 chr11 47408204 47408448 + 72.6 0.000 promoter-TSS (NM_152264) promoter-TSS (NM_152264) -169 NM_152264 91252 Hs.523664 NM_152264 ENSG00000165915 SLC39A13 EDSSPD3|LZT-Hs9|SCDEDS|ZIP13 solute carrier family 39 member 13 protein-coding chr5-18 chr5 140401472 140401716 + 72.4 0.000 promoter-TSS (NM_017978) promoter-TSS (NM_017978) -220 NM_020690 404734 Hs.594084 NM_020690 ENSG00000254996 ANKHD1-EIF4EBP3 MASK-BP3|MASK-BP3ARF ANKHD1-EIF4EBP3 readthrough protein-coding chr4-5 chr4 9152892 9153136 + 72.4 0.000 Intergenic CpG -20159 NM_001358418 100287045 NM_001358418 ENSG00000229924 FAM90A26 FAM90A26P family with sequence similarity 90 member A26 protein-coding chr2-30 chr2 88627575 88627819 + 72.3 0.000 promoter-TSS (NR_135540) promoter-TSS (NR_135540) -132 NR_135540 101928403 Hs.434326 NR_135540 ENSG00000234028 EIF2AK3-DT - EIF2AK3 divergent transcript ncRNA chr12-13 chr12 116738077 116738321 + 72.3 0.000 promoter-TSS (NM_001353625) promoter-TSS (NM_001353625) -92 NM_001109903 84900 Hs.437195 NM_032814 ENSG00000135119 RNFT2 TMEM118 ring finger protein, transmembrane 2 protein-coding chr5-17 chr5 69166943 69167187 + 72.1 0.000 promoter-TSS (NM_031966) promoter-TSS (NM_031966) 55 NM_001354844 891 Hs.23960 NM_031966 ENSG00000134057 CCNB1 CCNB cyclin B1 protein-coding chr5-10 chr5 49666114 49666358 + 72.1 0.000 Intergenic (CATTC)n|Satellite|Satellite 775052 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr16-25 chr16 19555378 19555622 + 72.0 0.000 promoter-TSS (NR_158161) promoter-TSS (NR_158161) -203 NM_001365293 57020 Hs.654964 NM_020314 ENSG00000103544 VPS35L C16orf62 VPS35 endosomal protein sorting factor like protein-coding chr9-17 chr9 34989442 34989686 + 72.0 0.000 promoter-TSS (NM_001135004) promoter-TSS (NM_001135004) -77 NM_001349725 25822 Hs.237506 NM_012266 ENSG00000137094 DNAJB5 Hsc40 DnaJ heat shock protein family (Hsp40) member B5 protein-coding chr22-15 chr22 41448435 41448679 + 72.0 0.000 Intergenic Intergenic -1756 NM_016272 10766 Hs.474978 NM_016272 ENSG00000183864 TOB2 APRO5|TOB4|TOBL|TROB2 transducer of ERBB2, 2 protein-coding chr3-31 chr3 38137131 38137375 + 71.5 0.000 promoter-TSS (NM_001607) promoter-TSS (NM_001607) -11 NR_024024 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr3-32 chr3 194769211 194769455 + 71.5 0.000 promoter-TSS (NR_146990) promoter-TSS (NR_146990) -624 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr17-48 chr17 48048118 48048362 + 71.4 0.000 promoter-TSS (NM_001330261) promoter-TSS (NM_001330261) -119 NM_001330262 4779 Hs.514284 NM_003204 ENSG00000082641 NFE2L1 LCR-F1|NRF1|TCF11 nuclear factor, erythroid 2 like 1 protein-coding chr14-32 chr14 23321137 23321381 + 71.4 0.000 promoter-TSS (NM_001360551) promoter-TSS (NM_001360551) -198 NM_001360551 8106 Hs.707712 NM_004643 ENSG00000100836 PABPN1 OPMD|PAB2|PABII|PABP-2|PABP2 poly(A) binding protein nuclear 1 protein-coding chr14-9 chr14 63641899 63642143 + 71.2 0.000 promoter-TSS (NM_001008726) promoter-TSS (NM_001008726) -150 NM_001258272 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding chr5-1 chr5 49658413 49658657 + 71.2 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 782753 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding chr16-40 chr16 29944031 29944275 + 71.1 0.000 Intergenic L2c|LINE|L2 -17926 NM_001369689 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr7-41 chr7 128862744 128862988 + 71.1 0.000 promoter-TSS (NM_001198909) promoter-TSS (NM_001198909) 10 NM_001198909 9296 Hs.78089 NM_004231 ENSG00000128524 ATP6V1F ATP6S14|VATF|Vma7 ATPase H+ transporting V1 subunit F protein-coding chr2-22 chr2 96858010 96858254 + 70.9 0.000 promoter-TSS (NM_016466) promoter-TSS (NM_016466) -116 NM_016466 51239 Hs.709507 NM_016466 ENSG00000213337 ANKRD39 - ankyrin repeat domain 39 protein-coding chr11-38 chr11 45918024 45918268 + 70.9 0.000 promoter-TSS (NM_057174) promoter-TSS (NM_057174) -23 NM_057174 9409 Hs.100915 NM_004813 ENSG00000121680 PEX16 PBD8A|PBD8B peroxisomal biogenesis factor 16 protein-coding chr9-24 chr9 129036383 129036627 + 70.3 0.000 promoter-TSS (NR_138425) promoter-TSS (NR_138425) -121 NR_138424 84895 Hs.632693 NM_032809 ENSG00000148343 MIGA2 C9orf54|FAM73B mitoguardin 2 protein-coding chr17-34 chr17 3048915 3049159 + 70.2 0.000 Intergenic CpG 14570 NM_014566 8386 Hs.553508 NM_014566 ENSG00000262628 OR1D5 C17orf2|OR17-2|OR17-30|OR17-31|OR1D4 olfactory receptor family 1 subfamily D member 5 protein-coding chr11-45 chr11 85628304 85628548 + 70.2 0.000 promoter-TSS (NM_001193538) promoter-TSS (NM_001193538) -53 NM_001351274 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr1-31 chr1 11980207 11980451 + 70.0 0.000 5' UTR (NM_014874, exon 1 of 19) 5' UTR (NM_014874, exon 1 of 19) 148 NM_001127660 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr12-16 chr12 14803502 14803746 + 70.0 0.000 promoter-TSS (NM_175874) promoter-TSS (NM_175874) -46 NM_175874 144608 Hs.659951 NM_175874 ENSG00000182993 C12orf60 - chromosome 12 open reading frame 60 protein-coding chr13-4 chr13 49444109 49444353 + 69.9 0.000 promoter-TSS (NR_135324) promoter-TSS (NR_135324) -43 NM_001160308 83852 Hs.631789 NM_031915 ENSG00000136169 SETDB2 C13orf4|CLLD8|CLLL8|KMT1F SET domain bifurcated histone lysine methyltransferase 2 protein-coding chr11-49 chr11 77994755 77994999 + 69.6 0.000 promoter-TSS (NM_033547) promoter-TSS (NM_033547) -209 NM_033547 92105 Hs.533723 NM_033547 ENSG00000149262 INTS4 INT4|MST093 integrator complex subunit 4 protein-coding chr3-51 chr3 107522865 107523109 + 69.6 0.000 promoter-TSS (NM_001142568) promoter-TSS (NM_001142568) 25 NM_001142568 56987 Hs.124366 NM_020235 ENSG00000114439 BBX ARTC1|HBP2|HSPC339|MDS001 BBX high mobility group box domain containing protein-coding chr16-30 chr16 88811899 88812143 + 69.3 0.000 promoter-TSS (NM_000485) promoter-TSS (NM_000485) -93 NM_000485 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr7-38 chr7 124929895 124930139 + 69.3 0.000 promoter-TSS (NR_003102) promoter-TSS (NR_003102) -34 NR_003104 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr9-13 chr9 15422581 15422825 + 69.1 0.000 promoter-TSS (NR_161435) promoter-TSS (NR_161435) -81 NM_001039697 6619 Hs.546299 NM_003084 ENSG00000164975 SNAPC3 PTFbeta|SNAP50 small nuclear RNA activating complex polypeptide 3 protein-coding chr19-65 chr19 49641983 49642227 + 69.1 0.000 promoter-TSS (NM_021228) promoter-TSS (NM_021228) -104 NM_021228 58506 Hs.103521 NM_021228 ENSG00000126461 SCAF1 SRA1 SR-related CTD associated factor 1 protein-coding chr10-24 chr10 17238637 17238881 + 68.9 0.000 Intergenic Intergenic -8774 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA chr1-35 chr1 161166088 161166332 + 68.8 0.000 promoter-TSS (NM_001122764) promoter-TSS (NM_001122764) -216 NM_001365400 5498 Hs.517373 NM_000309 ENSG00000143224 PPOX PPO|V290M|VP protoporphyrinogen oxidase protein-coding chr21-9 chr21 36430166 36430410 + 68.3 0.000 Intergenic Intergenic 36179 NM_012130 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr19-116 chr19 34926887 34927131 + 68.3 0.000 promoter-TSS (NR_110749) promoter-TSS (NR_110749) 106 NM_001099438 90075 Hs.657402 NM_194325 ENSG00000168661 ZNF30 KOX28 zinc finger protein 30 protein-coding chr19-88 chr19 49496069 49496313 + 67.9 0.000 promoter-TSS (NM_001015) promoter-TSS (NM_001015) -243 NM_001015 6205 Hs.433529 NM_001015 ENSG00000142534 RPS11 S11 ribosomal protein S11 protein-coding chr10-32 chr10 97640430 97640674 + 67.7 0.000 promoter-TSS (NM_018425) promoter-TSS (NM_018425) -134 NM_018425 55361 Hs.25300 NM_018425 ENSG00000155252 PI4K2A PI4KII|PIK42A phosphatidylinositol 4-kinase type 2 alpha protein-coding chr7-35 chr7 129224650 129224894 + 67.7 0.000 promoter-TSS (NM_015328) promoter-TSS (NM_015328) -258 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr1-73 chr1 222754426 222754670 + 67.7 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR 14864 NM_001324080 400823 Hs.697608 NM_207468 ENSG00000197520 FAM177B - family with sequence similarity 177 member B protein-coding chr17-30 chr17 31901603 31901847 + 67.7 0.000 promoter-TSS (NM_018428) promoter-TSS (NM_018428) -17 NM_018428 55813 Hs.589862 NM_018428 ENSG00000108651 UTP6 C17orf40|HCA66 UTP6 small subunit processome component protein-coding chr7-40 chr7 108569690 108569934 + 67.4 0.000 promoter-TSS (NM_001130475) promoter-TSS (NM_001130475) -44 NM_001287601 168451 Hs.707689 NM_182529 ENSG00000177683 THAP5 - THAP domain containing 5 protein-coding chr5-24 chr5 41904039 41904283 + 67.3 0.000 promoter-TSS (NM_175921) promoter-TSS (NM_175921) -183 NM_175921 285636 Hs.29899 NM_175921 ENSG00000205765 C5orf51 - chromosome 5 open reading frame 51 protein-coding chr8-9 chr8 144104188 144104432 + 67.3 0.000 promoter-TSS (NM_030974) promoter-TSS (NM_030974) -151 NM_032272 84232 Hs.19673 NM_032272 ENSG00000179632 MAF1 - MAF1 homolog, negative regulator of RNA polymerase III protein-coding chr4-16 chr4 687245 687489 + 67.3 0.000 intron (NM_001294341, intron 1 of 9) intron (NM_001294341, intron 1 of 9) 1784 NM_001294341 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chr3-42 chr3 121749736 121749980 + 67.1 0.000 promoter-TSS (NM_001366284) promoter-TSS (NM_001366284) -91 NM_001256488 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding chr3-8 chr3 50299369 50299613 + 67.0 0.000 promoter-TSS (NM_001200031) promoter-TSS (NM_001200031) -86 NM_003549 8372 Hs.129910 NM_003549 ENSG00000186792 HYAL3 HYAL-3|LUCA-3|LUCA3 hyaluronidase 3 protein-coding chr2-107 chr2 238728844 238729088 + 66.8 0.000 Intergenic Intergenic 118941 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA chr11-103 chr11 62553347 62553591 + 66.8 0.000 Intergenic Intergenic -6663 NM_024060 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr11-53 chr11 65419056 65419300 + 66.8 0.000 Intergenic Intergenic -3620 NR_028272 283131 Hs.523789 NR_002802 ENSG00000245532 NEAT1 LINC00084|NCRNA00084|TncRNA|VINC nuclear paraspeckle assembly transcript 1 ncRNA chr2-24 chr2 24047357 24047601 + 66.7 0.000 promoter-TSS (NM_001142319) promoter-TSS (NM_001142319) -53 NM_001142319 80304 Hs.24624 NM_025203 ENSG00000163026 WDCP C2orf44|MMAP|PP384 WD repeat and coiled coil containing protein-coding GL000225.1-1 GL000225.1 67403 67647 + 66.7 0.000 NA NA NA NA chr9-29 chr9 133944774 133945018 + 66.5 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 47428 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr4-18 chr4 39527477 39527721 + 66.5 0.000 promoter-TSS (NM_001184701) promoter-TSS (NM_001184701) -160 NM_003359 7358 Hs.572518 NM_003359 ENSG00000109814 UGDH GDH|UDP-GlcDH|UDPGDH|UGD UDP-glucose 6-dehydrogenase protein-coding chr3-22 chr3 48635439 48635683 + 66.4 0.000 promoter-TSS (NM_134426) promoter-TSS (NM_134426) -100 NM_134426 65010 Hs.631925 NM_022911 ENSG00000225697 SLC26A6 - solute carrier family 26 member 6 protein-coding chr9-43 chr9 136352567 136352811 + 66.4 0.000 promoter-TSS (NM_001145639) promoter-TSS (NM_001145639) -368 NM_001145639 26086 Hs.239370 NM_015597 ENSG00000160360 GPSM1 AGS3 G protein signaling modulator 1 protein-coding chr20-1 chr20 17682289 17682533 + 66.4 0.000 promoter-TSS (NM_004587) promoter-TSS (NM_004587) -128 NM_004587 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr13-11 chr13 50082110 50082354 + 66.2 0.000 promoter-TSS (NR_002605) promoter-TSS (NR_002605) 63 NR_002605 10301 Hs.591229 NM_005887 ENSG00000176124 DLEU1 BCMS|BCMS1|DLB1|DLEU2|LEU1|LEU2|LINC00021|NCRNA00021|XTP6 deleted in lymphocytic leukemia 1 ncRNA chr12-24 chr12 57078730 57078974 + 66.2 0.000 promoter-TSS (NM_015257) promoter-TSS (NM_015257) -61 NM_015257 23306 Hs.591040 NM_015257 ENSG00000166881 NEMP1 TMEM194|TMEM194A nuclear envelope integral membrane protein 1 protein-coding chr3-17 chr3 160755414 160755658 + 66.1 0.000 promoter-TSS (NM_139245) promoter-TSS (NM_139245) -695 NM_139245 151742 Hs.389027 NM_139245 ENSG00000163590 PPM1L PP2C-epsilon|PP2CE|PPM1-LIKE protein phosphatase, Mg2+/Mn2+ dependent 1L protein-coding chr12-12 chr12 6613918 6614162 + 66.1 0.000 Intergenic Intergenic -6661 NM_001363606 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr2-32 chr2 237085608 237085852 + 65.8 0.000 promoter-TSS (NM_006710) promoter-TSS (NM_006710) -159 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr19-187 chr19 40285433 40285677 + 65.8 0.000 promoter-TSS (NM_001243028) promoter-TSS (NM_001243028) -210 NM_001243027 208 Hs.631535 NM_001626 ENSG00000105221 AKT2 HIHGHH|PKBB|PKBBETA|PRKBB|RAC-BETA AKT serine/threonine kinase 2 protein-coding chr17-20 chr17 82698685 82698929 + 65.8 0.000 promoter-TSS (NM_006822) promoter-TSS (NM_006822) -109 NM_006822 10966 Hs.484068 NM_006822 ENSG00000141542 RAB40B RAR|SEC4L RAB40B, member RAS oncogene family protein-coding chr3-37 chr3 153161242 153161486 + 65.6 0.000 promoter-TSS (NM_002886) promoter-TSS (NM_002886) -862 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr7-16 chr7 72828120 72828364 + 65.5 0.000 promoter-TSS (NM_001145440) promoter-TSS (NM_001145440) -42 NM_001145440 441250 Hs.488614 NM_001145440 ENSG00000277149 TYW1B LINC00069|NCRNA00069|RSAFD2 tRNA-yW synthesizing protein 1 homolog B protein-coding chr7-1 chr7 76997408 76997652 + 65.3 0.000 intron (NR_023383, intron 2 of 10) (GT)n|Simple_repeat|Simple_repeat 16708 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr16-29 chr16 74666820 74667064 + 65.3 0.000 promoter-TSS (NM_018124) promoter-TSS (NM_018124) -65 NM_001370542 55159 Hs.567525 NM_018124 ENSG00000168411 RFWD3 FANCW|RNF201 ring finger and WD repeat domain 3 protein-coding chrX-2 chrX 125577549 125577793 + 65.2 0.000 Intergenic L1MA3|LINE|L1 257800 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr19-83 chr19 58544012 58544256 + 65.2 0.000 promoter-TSS (NM_005762) promoter-TSS (NM_005762) 70 NM_005762 10155 Hs.467408 NM_005762 ENSG00000130726 TRIM28 KAP1|PPP1R157|RNF96|TF1B|TIF1B tripartite motif containing 28 protein-coding chr6-40 chr6 156953573 156953817 + 65.0 0.000 intron (NM_020732, intron 5 of 19) intron (NM_020732, intron 5 of 19) -82732 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr1-69 chr1 36149508 36149752 + 64.9 0.000 promoter-TSS (NR_073097) promoter-TSS (NR_073097) -116 NR_073098 27095 Hs.523131 NM_014408 ENSG00000054116 TRAPPC3 BET3 trafficking protein particle complex 3 protein-coding chr17-44 chr17 75046913 75047157 + 64.7 0.000 promoter-TSS (NR_110834) promoter-TSS (NR_110834) -66 NM_006356 10476 Hs.514465 NM_006356 ENSG00000167863 ATP5PD APT5H|ATP5H|ATPQ ATP synthase peripheral stalk subunit d protein-coding chr5-60 chr5 34007776 34008020 + 64.7 0.000 exon (NM_014324, exon 1 of 5) exon (NM_014324, exon 1 of 5) 152 NM_001167595 23600 Hs.508343 NM_014324 ENSG00000242110 AMACR AMACRD|CBAS4|P504S|RACE|RM alpha-methylacyl-CoA racemase protein-coding chr2-51 chr2 24084571 24084815 + 64.6 0.000 promoter-TSS (NM_001206802) promoter-TSS (NM_001206802) 141 NM_004881 9540 Hs.50649 NM_004881 ENSG00000115129 TP53I3 PIG3 tumor protein p53 inducible protein 3 protein-coding chr4-31 chr4 184734083 184734327 + 64.4 0.000 promoter-TSS (NM_024629) promoter-TSS (NM_024629) -109 NR_104593 79682 Hs.575032 NM_024629 ENSG00000151725 CENPU CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 centromere protein U protein-coding chr3-34 chr3 15601661 15601905 + 64.3 0.000 promoter-TSS (NM_001281724) promoter-TSS (NM_001281724) 38 NM_001370658 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding chr19-138 chr19 36489636 36489880 + 64.3 0.000 promoter-TSS (NM_001145343) promoter-TSS (NM_001145343) 131 NR_036504 728752 Hs.729762 NR_036504 ENSG00000267309 LOC728752 - uncharacterized LOC728752 ncRNA chr1-7 chr1 244451877 244452121 + 64.3 0.000 promoter-TSS (NM_001126) promoter-TSS (NM_001126) 61 NM_001365073 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr16-37 chr16 46689299 46689543 + 64.1 0.000 promoter-TSS (NM_014321) promoter-TSS (NM_014321) -238 NM_014321 23594 Hs.49760 NM_014321 ENSG00000091651 ORC6 ORC6L origin recognition complex subunit 6 protein-coding chr8-5 chr8 22673296 22673540 + 64.1 0.000 Intergenic Intergenic -4270 NR_156436 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr13-13 chr13 94601596 94601840 + 64.1 0.000 promoter-TSS (NM_180989) promoter-TSS (NM_180989) -139 NM_180989 160897 Hs.439363 NM_180989 ENSG00000152749 GPR180 ITR G protein-coupled receptor 180 protein-coding chr10-56 chr10 93437327 93437571 + 64.0 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 44885 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr14-6 chr14 105162501 105162745 + 64.0 0.000 intron (NM_145159, intron 2 of 24) intron (NM_145159, intron 2 of 24) 6153 NM_002226 3714 Hs.433445 NM_002226 ENSG00000184916 JAG2 HJ2|SER2 jagged canonical Notch ligand 2 protein-coding chr19-113 chr19 3971178 3971422 + 63.7 0.000 promoter-TSS (NM_001348) promoter-TSS (NM_001348) -201 NM_001348 1613 Hs.631844 NM_001348 ENSG00000167657 DAPK3 DLK|ZIP|ZIPK death associated protein kinase 3 protein-coding chr19-172 chr19 33177187 33177431 + 63.7 0.000 Intergenic CpG -17021 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr19-52 chr19 23250312 23250556 + 63.7 0.000 promoter-TSS (NM_001355406) promoter-TSS (NM_001355406) -40 NM_001355406 440519 Hs.675814 NM_001355404 ENSG00000196081 ZNF724 ZNF724P zinc finger protein 724 protein-coding chr14-35 chr14 23469390 23469634 + 63.5 0.000 promoter-TSS (NM_015514) promoter-TSS (NM_015514) -191 NM_015514 25983 Hs.9043 NM_015514 ENSG00000129460 NGDN C14orf120|CANu1|LCP5|NGD|lpd-2 neuroguidin protein-coding chr1-80 chr1 27672197 27672441 + 63.5 0.000 promoter-TSS (NM_002038) promoter-TSS (NM_002038) -127 NM_022872 2537 Hs.523847 NM_002038 ENSG00000126709 IFI6 6-16|FAM14C|G1P3|IFI-6-16|IFI616 interferon alpha inducible protein 6 protein-coding chr2-52 chr2 159202729 159202973 + 63.5 0.000 intron (NM_001350065, intron 20 of 27) intron (NM_001350065, intron 20 of 27) 16016 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr2-39 chr2 219229653 219229897 + 63.5 0.000 promoter-TSS (NM_018089) promoter-TSS (NM_018089) -31 NM_018089 55139 Hs.437647 NM_018089 ENSG00000163516 ANKZF1 Vms1|ZNF744 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 protein-coding chr19-68 chr19 50025413 50025657 + 63.4 0.000 promoter-TSS (NM_001308420) promoter-TSS (NM_001308420) 13 NM_001025778 51231 Hs.443330 NM_016440 ENSG00000105053 VRK3 - VRK serine/threonine kinase 3 protein-coding chr8-2 chr8 65260432 65260676 + 63.4 0.000 Intergenic L1MA1|LINE|L1 -80214 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr1-59 chr1 40531510 40531754 + 63.4 0.000 promoter-TSS (NM_152373) promoter-TSS (NM_152373) -5 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr7-44 chr7 66592226 66592470 + 63.1 0.000 promoter-TSS (NR_111973) promoter-TSS (NR_111973) 59 NR_111974 493754 Hs.732409 NR_002933 ENSG00000229180 GS1-124K5.11 - RAB guanine nucleotide exchange factor 1 pseudogene pseudo chr19-31 chr19 16660158 16660402 + 62.9 0.000 promoter-TSS (NM_024104) promoter-TSS (NM_024104) -123 NM_024104 79086 Hs.356467 NM_024104 ENSG00000214046 SMIM7 C19orf42 small integral membrane protein 7 protein-coding chr9-27 chr9 97633350 97633594 + 62.7 0.000 promoter-TSS (NM_001351506) promoter-TSS (NM_001351506) 49 NM_001351507 4686 Hs.595669 NM_002486 ENSG00000136937 NCBP1 CBP80|NCBP|Sto1 nuclear cap binding protein subunit 1 protein-coding chr19-97 chr19 45770470 45770714 + 62.7 0.000 exon (NM_001288764, exon 16 of 16) exon (NM_001288764, exon 16 of 16) -1340 NM_175875 147912 Hs.43314 NM_175875 ENSG00000177045 SIX5 BOR2|DMAHP SIX homeobox 5 protein-coding chr10-23 chr10 73997802 73998046 + 62.6 0.000 promoter-TSS (NM_003373) promoter-TSS (NM_003373) -190 NM_014000 7414 Hs.643896 NM_003373 ENSG00000035403 VCL CMD1W|CMH15|HEL114|MV|MVCL vinculin protein-coding chr10-31 chr10 28532772 28533016 + 62.3 0.000 promoter-TSS (NR_033805) promoter-TSS (NR_033805) 115 NM_100264 51322 Hs.743224 NM_016628 ENSG00000095787 WAC BM-016|DESSH|PRO1741|Wwp4 WW domain containing adaptor with coiled-coil protein-coding chr17-58 chr17 45061006 45061250 + 62.3 0.000 promoter-TSS (NM_001321326) promoter-TSS (NM_001321326) 1 NM_001288654 79877 Hs.463148 NM_024819 ENSG00000172992 DCAKD - dephospho-CoA kinase domain containing protein-coding chr1-86 chr1 42846422 42846666 + 62.1 0.000 promoter-TSS (NM_015911) promoter-TSS (NM_015911) -29 NM_015911 51058 Hs.20879 NM_015911 ENSG00000164011 ZNF691 Zfp691 zinc finger protein 691 protein-coding chr4-56 chr4 152352703 152352947 + 62.1 0.000 promoter-TSS (NM_018315) promoter-TSS (NM_018315) 1 NM_018315 55294 Hs.561245 NM_018315 ENSG00000109670 FBXW7 AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4 F-box and WD repeat domain containing 7 protein-coding chr1-87 chr1 43206888 43207132 + 62.1 0.000 intron (NM_001195831, intron 10 of 23) intron (NM_001195831, intron 10 of 23) -34440 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding chrX-5 chrX 69672446 69672690 + 62.1 0.000 intron (NM_001005613, intron 2 of 2) 5S|rRNA|rRNA 56455 NM_001005610 1896 Hs.105407 NM_001399 ENSG00000158813 EDA ECTD1|ED1|ED1-A1|ED1-A2|EDA-A1|EDA-A2|EDA1|EDA2|HED|HED1|ODT1|STHAGX1|TNLG7C|XHED|XLHED ectodysplasin A protein-coding chr10-42 chr10 3107568 3107812 + 61.8 0.000 intron (NM_001242339, intron 10 of 23) intron (NM_001242339, intron 10 of 23) 3081 NM_001323070 5214 Hs.26010 NM_002627 ENSG00000067057 PFKP ATP-PFK|PFK-C|PFK-P|PFKF phosphofructokinase, platelet protein-coding chr2-17 chr2 73233226 73233470 + 61.8 0.000 promoter-TSS (NM_032319) promoter-TSS (NM_032319) -64 NR_144358 84279 Hs.61268 NM_032319 ENSG00000135617 PRADC1 C2orf7|PAP21 protease associated domain containing 1 protein-coding chrX-4 chrX 47650675 47650919 + 61.7 0.000 promoter-TSS (NM_001114123) promoter-TSS (NM_001114123) -193 NM_005229 2002 Hs.181128 NM_005229 ENSG00000126767 ELK1 - ETS transcription factor ELK1 protein-coding chr19-66 chr19 53879284 53879528 + 61.7 0.000 Intergenic Intergenic -2791 NM_001316329 5582 Hs.631564 NM_002739 ENSG00000126583 PRKCG PKC-gamma|PKCC|PKCG|PKCI(3)|PKCgamma|SCA14 protein kinase C gamma protein-coding chr1-120 chr1 147757667 147757911 + 61.4 0.000 3' UTR (NM_005266, exon 2 of 2) 3' UTR (NM_005266, exon 2 of 2) 2813 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding chr11-77 chr11 95789542 95789786 + 61.2 0.000 promoter-TSS (NM_001363604) promoter-TSS (NM_001363604) 118 NM_144664 143684 Hs.288304 NM_144664 ENSG00000077458 FAM76B - family with sequence similarity 76 member B protein-coding chr3-44 chr3 50359473 50359717 + 61.2 0.000 promoter-TSS (NM_007024) promoter-TSS (NM_007024) -74 NM_007024 11070 Hs.91566 NM_007024 ENSG00000126062 TMEM115 PL6 transmembrane protein 115 protein-coding chr12-33 chr12 55996963 55997207 + 61.2 0.000 promoter-TSS (NM_000456) promoter-TSS (NM_000456) -191 NM_001032386 6821 Hs.558403 NM_000456 ENSG00000139531 SUOX - sulfite oxidase protein-coding chr19-73 chr19 48493081 48493325 + 61.2 0.000 intron (NM_001080434, intron 13 of 15) CpG 19986 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr19-55 chr19 40348365 40348609 + 60.8 0.000 promoter-TSS (NM_001256441) promoter-TSS (NM_001256441) 30 NR_156465 126526 Hs.631557 NM_178830 ENSG00000160392 C19orf47 - chromosome 19 open reading frame 47 protein-coding chr11-182 chr11 71928742 71928986 + 60.8 0.000 promoter-TSS (NR_029192) promoter-TSS (NR_029192) 142 NR_024147 55298 Hs.368554 NM_018320 ENSG00000137522 RNF121 - ring finger protein 121 protein-coding chr11-92 chr11 65720587 65720831 + 60.8 0.000 exon (NM_032193, exon 1 of 4) exon (NM_032193, exon 1 of 4) 229 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr1-91 chr1 155308621 155308865 + 60.8 0.000 promoter-TSS (NM_002004) promoter-TSS (NM_002004) -5 NM_001242825 2224 Hs.335918 NM_002004 ENSG00000160752 FDPS FPPS|FPS|POROK9 farnesyl diphosphate synthase protein-coding chr10-44 chr10 132517286 132517530 + 60.8 0.000 intron (NR_158224, intron 2 of 3) intron (NR_158224, intron 2 of 3) 19515 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr3-47 chr3 31532371 31532615 + 60.5 0.000 promoter-TSS (NM_178862) promoter-TSS (NM_178862) -432 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding chr21-19 chr21 37267430 37267674 + 60.5 0.000 promoter-TSS (NM_006052) promoter-TSS (NM_006052) -218 NM_006052 10311 Hs.369488 NM_006052 ENSG00000157538 VPS26C DCRA|DSCR3|DSCRA VPS26 endosomal protein sorting factor C protein-coding GL000224.1-1 GL000224.1 3771 4015 + 60.3 0.000 NA NA NA NA chr11-171 chr11 132220542 132220786 + 60.3 0.000 intron (NM_016522, intron 3 of 6) intron (NM_016522, intron 3 of 6) -63638 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr7-97 chr7 100673467 100673711 + 60.2 0.000 promoter-TSS (NM_005273) promoter-TSS (NM_005273) -151 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr17-26 chr17 28335609 28335853 + 60.0 0.000 promoter-TSS (NM_001267778) promoter-TSS (NM_001267778) -30 NM_021137 7126 Hs.76090 NM_021137 ENSG00000109079 TNFAIP1 B12|B61|BTBD34|EDP1|hBACURD2 TNF alpha induced protein 1 protein-coding chr22-29 chr22 46007905 46008149 + 60.0 0.000 non-coding (NR_027240, exon 1 of 1) non-coding (NR_027240, exon 1 of 1) 1411 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr13-9 chr13 96053314 96053558 + 60.0 0.000 promoter-TSS (NM_020121) promoter-TSS (NM_020121) -35 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr5-43 chr5 132737329 132737573 + 60.0 0.000 promoter-TSS (NM_001300791) promoter-TSS (NM_001300791) 95 NM_007054 11127 Hs.43670 NM_007054 ENSG00000131437 KIF3A FLA10|KLP-20 kinesin family member 3A protein-coding chr3-95 chr3 52154626 52154870 + 59.9 0.000 promoter-TSS (NM_001161580) promoter-TSS (NM_001161580) -325 NM_001161580 25886 Hs.476306 NM_015426 ENSG00000164087 POC1A PIX2|SOFT|WDR51A POC1 centriolar protein A protein-coding chr1-104 chr1 11805839 11806083 + 59.7 0.000 promoter-TSS (NR_046428) promoter-TSS (NR_046428) -135 NR_046428 1185 Hs.193043 NM_001286 ENSG00000011021 CLCN6 CLC-6 chloride voltage-gated channel 6 protein-coding chr11-57 chr11 63974384 63974628 + 59.7 0.000 promoter-TSS (NM_004074) promoter-TSS (NM_004074) -114 NM_004074 1351 Hs.743989 NM_004074 ENSG00000176340 COX8A COX|COX8|COX8-2|COX8L|VIII|VIII-L cytochrome c oxidase subunit 8A protein-coding chr9-47 chr9 130712504 130712748 + 59.6 0.000 Intergenic CpG -1255 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr16-38 chr16 75517229 75517473 + 59.6 0.000 Intergenic CpG 17819 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding chr15-17 chr15 41774167 41774411 + 59.6 0.000 promoter-TSS (NM_014994) promoter-TSS (NM_014994) -195 NR_049762 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr1-50 chr1 44674091 44674335 + 59.4 0.000 promoter-TSS (NM_001145636) promoter-TSS (NM_001145636) 268 NM_001300747 79639 Hs.22157 NM_024587 ENSG00000126106 TMEM53 NET4 transmembrane protein 53 protein-coding chr3-25 chr3 115147209 115147453 + 59.3 0.000 promoter-TSS (NM_001348803) promoter-TSS (NM_001348803) -43 NM_001348803 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr8-24 chr8 106725923 106726167 + 59.1 0.000 promoter-TSS (NM_001198535) promoter-TSS (NM_001198535) -62 NM_001198535 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chrX-14 chrX 134373121 134373365 + 59.1 0.000 promoter-TSS (NM_001015877) promoter-TSS (NM_001015877) -69 NM_032458 84295 Hs.356501 NM_032335 ENSG00000156531 PHF6 BFLS|BORJ|CENP-31 PHD finger protein 6 protein-coding chr10-64 chr10 73252557 73252801 + 59.0 0.000 promoter-TSS (NR_134459) promoter-TSS (NR_134459) -35 NM_016065 51021 Hs.180312 NM_016065 ENSG00000182180 MRPS16 CGI-132|COXPD2|MRP-S16|RPMS16 mitochondrial ribosomal protein S16 protein-coding chr1-139 chr1 154974399 154974643 + 59.0 0.000 promoter-TSS (NM_001826) promoter-TSS (NM_001826) -121 NR_024163 1163 Hs.374378 NM_001826 ENSG00000173207 CKS1B CKS1|PNAS-16|PNAS-18|ckshs1 CDC28 protein kinase regulatory subunit 1B protein-coding chr6-32 chr6 75243650 75243894 + 58.8 0.000 promoter-TSS (NR_158783) promoter-TSS (NR_158783) 29 NR_158783 1347 Hs.70312 NM_001865 ENSG00000112695 COX7A2 COX7AL|COX7AL1|COXVIIAL|COXVIIa-L|VIIAL cytochrome c oxidase subunit 7A2 protein-coding chr7-114 chr7 157310070 157310314 + 58.8 0.000 Intergenic Intergenic -26812 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr1-64 chr1 53838348 53838592 + 58.7 0.000 promoter-TSS (NM_018087) promoter-TSS (NM_018087) -174 NM_001168551 55706 Hs.476525 NM_018087 ENSG00000058804 NDC1 NET3|TMEM48 NDC1 transmembrane nucleoporin protein-coding chr8-35 chr8 60951085 60951329 + 58.5 0.000 Intergenic Intergenic 16541 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr21-7 chr21 33915820 33916064 + 58.5 0.000 promoter-TSS (NM_001697) promoter-TSS (NM_001697) -138 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr10-14 chr10 79399486 79399730 + 58.5 0.000 intron (NM_153367, intron 2 of 3) MIR3|SINE|MIR 46016 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr12-39 chr12 401589 401833 + 58.5 0.000 promoter-TSS (NM_032358) promoter-TSS (NM_032358) 67 NM_032358 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr1-48 chr1 2246366 2246610 + 58.5 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 18169 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr6-27 chr6 1481381 1481625 + 58.4 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -91092 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr4-33 chr4 102827967 102828211 + 58.4 0.000 promoter-TSS (NM_181886) promoter-TSS (NM_181886) 34 NR_131186 105377348 Hs.661187 NR_131185 ENSG00000246560 UBE2D3-AS1 - UBE2D3 antisense RNA 1 ncRNA chr11-113 chr11 830271 830515 + 58.4 0.000 intron (NM_001286606, intron 5 of 8) CpG-3790 2133 NM_173584 283229 Hs.660936 NM_173584 ENSG00000177685 CRACR2B EFCAB4A calcium release activated channel regulator 2B protein-coding chr9-46 chr9 2015087 2015331 + 58.4 0.000 promoter-TSS (NM_003070) promoter-TSS (NM_003070) -138 NM_003070 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding chr8-56 chr8 130232849 130233093 + 58.2 0.000 intron (NM_001362925, intron 4 of 29) intron (NM_001362925, intron 4 of 29) 63562 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr7-42 chr7 56051502 56051746 + 58.2 0.000 promoter-TSS (NM_001009186) promoter-TSS (NM_001009186) -141 NM_001762 908 Hs.82916 NM_001762 ENSG00000146731 CCT6A CCT-zeta|CCT-zeta-1|CCT6|Cctz|HTR3|MoDP-2|TCP-1-zeta|TCP20|TCPZ|TTCP20 chaperonin containing TCP1 subunit 6A protein-coding chr5-23 chr5 142770204 142770448 + 58.2 0.000 promoter-TSS (NM_001135608) promoter-TSS (NM_001135608) -51 NM_015071 23092 Hs.654668 NM_015071 ENSG00000145819 ARHGAP26 GRAF|GRAF1|OPHN1L|OPHN1L1 Rho GTPase activating protein 26 protein-coding chr12-31 chr12 54280441 54280685 + 58.1 0.000 promoter-TSS (NM_031157) promoter-TSS (NM_031157) -163 NM_002136 3178 Hs.546261 NM_002136 ENSG00000135486 HNRNPA1 ALS19|ALS20|HNRPA1|HNRPA1L3|IBMPFD3|UP 1|hnRNP A1|hnRNP-A1 heterogeneous nuclear ribonucleoprotein A1 protein-coding chr5-22 chr5 172733610 172733854 + 57.9 0.000 Intergenic Intergenic -21771 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr22-31 chr22 42070713 42070957 + 57.8 0.000 promoter-TSS (NM_001362850) promoter-TSS (NM_001362850) 7 NM_001362848 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding chr2-26 chr2 203014613 203014857 + 57.8 0.000 promoter-TSS (NM_001114132) promoter-TSS (NM_001114132) -144 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr16-73 chr16 68310966 68311210 + 57.6 0.000 promoter-TSS (NM_019023) promoter-TSS (NM_019023) -26 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr17-73 chr17 77427589 77427833 + 57.6 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 22634 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr3-128 chr3 150062547 150062791 + 57.5 0.000 Intergenic Intergenic -33774 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr1-40 chr1 3313209 3313453 + 57.5 0.000 intron (NM_022114, intron 3 of 16) (AGCGGAG)n|Simple_repeat|Simple_repeat -141334 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chrX-8 chrX 49191012 49191256 + 57.5 0.000 intron (NM_003179, intron 6 of 6) intron (NM_003179, intron 6 of 6) -4761 NM_006150 4007 Hs.732712 NM_006150 ENSG00000012211 PRICKLE3 LMO6|Pk3 prickle planar cell polarity protein 3 protein-coding chr10-93 chr10 43129326 43129570 + 57.5 0.000 3' UTR (NM_020975, exon 20 of 20) 3' UTR (NM_020975, exon 20 of 20) -8997 NM_018590 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding chr7-77 chr7 133252898 133253142 + 57.3 0.000 promoter-TSS (NM_001037126) promoter-TSS (NM_001037126) -47 NM_001037126 60412 Hs.321273 NM_021807 ENSG00000131558 EXOC4 SEC8|SEC8L1|Sec8p exocyst complex component 4 protein-coding chr22-30 chr22 37844337 37844581 + 57.3 0.000 promoter-TSS (NM_138797) promoter-TSS (NM_138797) -12 NR_146279 129138 Hs.135259 NM_138797 ENSG00000100124 ANKRD54 LIAR ankyrin repeat domain 54 protein-coding chr17-38 chr17 28041321 28041565 + 57.3 0.000 Intergenic A-rich|Low_complexity|Low_complexity -1234 NM_016231 51701 Hs.208759 NM_016231 ENSG00000087095 NLK - nemo like kinase protein-coding chr16-51 chr16 29815921 29816165 + 57.2 0.000 promoter-TSS (NM_024516) promoter-TSS (NM_024516) -109 NM_024516 79447 Hs.702841 NM_024516 ENSG00000280789 PAGR1 C16orf53|GAS|PA1 PAXIP1 associated glutamate rich protein 1 protein-coding chr1-189 chr1 109687702 109687946 + 57.2 0.000 promoter-TSS (NM_000561) promoter-TSS (NM_000561) 7 NM_146421 2944 Hs.301961 NM_000561 ENSG00000134184 GSTM1 GST1|GSTM1-1|GSTM1a-1a|GSTM1b-1b|GTH4|GTM1|H-B|MU|MU-1 glutathione S-transferase mu 1 protein-coding chr7-45 chr7 99438866 99439110 + 57.2 0.000 promoter-TSS (NM_015545) promoter-TSS (NM_015545) 45 NM_006693 10898 Hs.489287 NM_006693 ENSG00000160917 CPSF4 CPSF30|NAR|NEB-1|NEB1 cleavage and polyadenylation specific factor 4 protein-coding chr9-48 chr9 136372837 136373081 + 57.2 0.000 intron (NM_052814, intron 1 of 12) intron (NM_052814, intron 1 of 12) 710 NM_052814 64170 Hs.694071 NM_052813 ENSG00000187796 CARD9 CANDF2|hCARD9 caspase recruitment domain family member 9 protein-coding chr15-43 chr15 74598416 74598660 + 57.0 0.000 TTS (NM_006465) TTS (NM_006465) -9834 NM_003992 1198 Hs.511790 NM_001292 ENSG00000179335 CLK3 PHCLK3|PHCLK3/152 CDC like kinase 3 protein-coding chr1-58 chr1 16978747 16978991 + 56.9 0.000 intron (NM_001135247, intron 1 of 8) intron (NM_001135247, intron 1 of 8) 1751 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr3-73 chr3 128123780 128124024 + 56.9 0.000 promoter-TSS (NM_001319084) promoter-TSS (NM_001319084) -90 NM_001319084 8607 Hs.272822 NM_003707 ENSG00000175792 RUVBL1 ECP-54|ECP54|INO80H|NMP 238|NMP238|PONTIN|Pontin52|RVB1|TIH1|TIP49|TIP49A RuvB like AAA ATPase 1 protein-coding chr6-10 chr6 152983160 152983404 + 56.9 0.000 promoter-TSS (NM_012177) promoter-TSS (NM_012177) -241 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding chr3-66 chr3 167734763 167735007 + 56.9 0.000 promoter-TSS (NM_145860) promoter-TSS (NM_145860) 7 NM_007217 11235 Hs.478150 NM_007217 ENSG00000114209 PDCD10 CCM3|TFAR15 programmed cell death 10 protein-coding chr3-45 chr3 186570483 186570727 + 56.7 0.000 promoter-TSS (NM_016306) promoter-TSS (NM_016306) -62 NM_001134415 55171 Hs.518469 NM_018138 ENSG00000113838 TBCCD1 - TBCC domain containing 1 protein-coding chr19-181 chr19 48993516 48993760 + 56.7 0.000 promoter-TSS (NR_135578) promoter-TSS (NR_135578) 190 NM_001321191 10856 Hs.515846 NM_006666 ENSG00000183207 RUVBL2 CGI-46|ECP-51|ECP51|INO80J|REPTIN|RVB2|TAP54-beta|TIH2|TIP48|TIP49B RuvB like AAA ATPase 2 protein-coding chr19-166 chr19 42219920 42220164 + 56.5 0.000 promoter-TSS (NR_073047) promoter-TSS (NR_073047) 92 NM_001270614 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr14-30 chr14 59188470 59188714 + 56.5 0.000 promoter-TSS (NM_001270520) promoter-TSS (NM_001270520) -75 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr2-69 chr2 233854511 233854755 + 56.5 0.000 promoter-TSS (NM_001282963) promoter-TSS (NM_001282963) -67 NM_001282962 55355 Hs.532968 NM_018410 ENSG00000123485 HJURP FAKTS|URLC9|hFLEG1 Holliday junction recognition protein protein-coding chr18-19 chr18 57737678 57737922 + 56.5 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 65515 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chr11-55 chr11 67508174 67508418 + 56.4 0.000 promoter-TSS (NM_001271849) promoter-TSS (NM_001271849) -134 NM_001271849 10263 Hs.523835 NM_005851 ENSG00000167797 CDK2AP2 DOC-1R|p14 cyclin dependent kinase 2 associated protein 2 protein-coding chr19-146 chr19 6737681 6737925 + 56.4 0.000 promoter-TSS (NM_001080452) promoter-TSS (NM_001080452) -181 NM_001080452 56927 Hs.167641 NM_020171 ENSG00000125734 GPR108 LUSTR2 G protein-coupled receptor 108 protein-coding chr16-76 chr16 75254436 75254680 + 56.4 0.000 intron (NM_001170720, intron 1 of 7) (CA)n|Simple_repeat|Simple_repeat -2934 NM_001170717 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr2-38 chr2 241508590 241508834 + 56.4 0.000 promoter-TSS (NM_001271977) promoter-TSS (NM_001271977) -17 NM_001282307 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr16-119 chr16 30762059 30762303 + 56.4 0.000 promoter-TSS (NM_001286572) promoter-TSS (NM_001286572) 63 NM_001195620 90835 Hs.724010 NM_001014979 ENSG00000196118 CCDC189 C16orf93 coiled-coil domain containing 189 protein-coding chr3-90 chr3 194871717 194871961 + 56.4 0.000 Intergenic Intergenic -103130 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr4-57 chr4 169010281 169010525 + 56.2 0.000 promoter-TSS (NM_032783) promoter-TSS (NM_032783) -148 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr10-9 chr10 511132 511376 + 56.1 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -117310 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr20-13 chr20 46406333 46406577 + 56.1 0.000 promoter-TSS (NR_146919) promoter-TSS (NR_146919) 160 NM_001318253 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr6-103 chr6 34324867 34325111 + 56.1 0.000 intron (NM_001202470, intron 6 of 8) intron (NM_001202470, intron 6 of 8) 67680 NM_006703 11165 Hs.188882 NM_006703 ENSG00000272325 NUDT3 DIPP|DIPP-1|DIPP1 nudix hydrolase 3 protein-coding chr17-67 chr17 951720 951964 + 56.1 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 27934 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr2-37 chr2 89585601 89585845 + 55.9 0.000 promoter-TSS (NR_160761) promoter-TSS (NR_160761) -58 NR_160761 107985911 NR_160761 LOC107985911 - lymphocyte specific protein 1 pseudogene pseudo chr1-9 chr1 2133291 2133535 + 55.6 0.000 intron (NM_001033582, intron 1 of 14) CpG 28697 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr9-66 chr9 124256483 124256727 + 55.6 0.000 Intergenic Intergenic -1001 NM_001166167 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr4-37 chr4 67545358 67545602 + 55.6 0.000 promoter-TSS (NM_001812) promoter-TSS (NM_001812) 23 NM_001362481 1060 Hs.479867 NM_001812 ENSG00000145241 CENPC CENP-C|CENPC1|MIF2|hcp-4 centromere protein C protein-coding chr5-53 chr5 95555093 95555337 + 55.5 0.000 promoter-TSS (NM_014639) promoter-TSS (NM_014639) 114 NM_198150 153642 Hs.585051 NM_198150 ENSG00000164291 ARSK TSULF arylsulfatase family member K protein-coding chr4-43 chr4 47485241 47485485 + 55.3 0.000 promoter-TSS (NM_020453) promoter-TSS (NM_020453) 88 NM_020453 57205 Hs.437241 NM_020453 ENSG00000145246 ATP10D ATPVD ATPase phospholipid transporting 10D (putative) protein-coding chr12-42 chr12 26274824 26275068 + 55.3 0.000 Intergenic Intergenic 79373 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr1-132 chr1 7117720 7117964 + 55.3 0.000 intron (NM_001349608, intron 3 of 21) intron (NM_001349608, intron 3 of 21) 271912 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr14-33 chr14 45134333 45134577 + 55.2 0.000 promoter-TSS (NM_002013) promoter-TSS (NM_002013) 26 NM_002013 2287 Hs.509226 NM_002013 ENSG00000100442 FKBP3 FKBP-25|FKBP-3|FKBP25|PPIase FKBP prolyl isomerase 3 protein-coding chr14-29 chr14 35826238 35826482 + 55.2 0.000 promoter-TSS (NM_032352) promoter-TSS (NM_032352) 22 NM_032352 84312 Hs.525299 NM_032352 ENSG00000100916 BRMS1L BRMS1 BRMS1 like transcriptional repressor protein-coding chr8-10 chr8 109539482 109539726 + 55.2 0.000 promoter-TSS (NM_004215) promoter-TSS (NM_004215) -96 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr7-66 chr7 149838247 149838491 + 55.0 0.000 promoter-TSS (NM_001099220) promoter-TSS (NM_001099220) -6 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr11-66 chr11 74493196 74493440 + 55.0 0.000 promoter-TSS (NM_001319240) promoter-TSS (NM_001319240) -67 NM_001319240 100287896 Hs.591971 NM_198519 LOC100287896 - uncharacterized LOC100287896 protein-coding chr11-60 chr11 844139 844383 + 55.0 0.000 promoter-TSS (NM_001025237) promoter-TSS (NM_001025237) 180 NM_001025234 7106 Hs.654836 NM_003271 ENSG00000214063 TSPAN4 NAG-2|NAG2|TETRASPAN|TM4SF7|TSPAN-4 tetraspanin 4 protein-coding chr3-46 chr3 9843826 9844070 + 54.9 0.000 promoter-TSS (NM_001351736) promoter-TSS (NM_001351736) 60 NM_001351736 285367 Hs.33719 NM_173659 ENSG00000156990 RPUSD3 - RNA pseudouridine synthase D3 protein-coding chr7-121 chr7 157271921 157272165 + 54.9 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -64961 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr14-53 chr14 101948190 101948434 + 54.9 0.000 Intergenic CpG -16261 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr22-72 chr22 41946846 41947090 + 54.9 0.000 promoter-TSS (NM_001304370) promoter-TSS (NM_001304370) 184 NM_001304371 79019 Hs.208912 NM_024053 ENSG00000100162 CENPM C22orf18|CENP-M|PANE1 centromere protein M protein-coding chr5-68 chr5 146182612 146182856 + 54.9 0.000 promoter-TSS (NM_001317964) promoter-TSS (NM_001317964) 53 NM_016460 51520 Hs.432674 NM_016460 ENSG00000133706 LARS HSPC192|ILFS1|LARS1|LEURS|LEUS|LFIS|LRS|PIG44|RNTLS|hr025Cl leucyl-tRNA synthetase protein-coding chr15-16 chr15 89575315 89575559 + 54.9 0.000 promoter-TSS (NM_152259) promoter-TSS (NM_152259) -32 NM_152259 90381 Hs.441708 NM_152259 ENSG00000140534 TICRR C15orf42|SLD3|Treslin TOPBP1 interacting checkpoint and replication regulator protein-coding chr14-44 chr14 99683888 99684132 + 54.7 0.000 promoter-TSS (NM_006668) promoter-TSS (NM_006668) -288 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chr19-58 chr19 8832637 8832881 + 54.7 0.000 promoter-TSS (NM_144693) promoter-TSS (NM_144693) -455 NM_144693 148156 Hs.349444 NM_144693 ENSG00000167785 ZNF558 - zinc finger protein 558 protein-coding chr19-169 chr19 7479612 7479856 + 54.7 0.000 intron (NM_080662, intron 3 of 4) L1MC1|LINE|L1 9301 NM_080662 92960 Hs.515100 NM_080662 ENSG00000104883 PEX11G - peroxisomal biogenesis factor 11 gamma protein-coding chr2-59 chr2 202294822 202295066 + 54.6 0.000 intron (NM_015934, intron 9 of 14) AluSg7|SINE|Alu 1893 NR_003031 692058 NR_003031 ENSG00000238317 SNORD11 HBII-95 small nucleolar RNA, C/D box 11 snoRNA chr12-52 chr12 123232913 123233157 + 54.6 0.000 promoter-TSS (NM_001194995) promoter-TSS (NM_001194995) 106 NR_103517 10198 Hs.577404 NM_022782 ENSG00000051825 MPHOSPH9 MPP-9|MPP9 M-phase phosphoprotein 9 protein-coding chr21-8 chr21 39183436 39183680 + 54.6 0.000 promoter-TSS (NM_203433) promoter-TSS (NM_203433) -44 NR_049728 8624 Hs.473838 NM_003720 ENSG00000183527 PSMG1 C21LRP|DSCR2|LRPC21|PAC-1|PAC1 proteasome assembly chaperone 1 protein-coding chr5-84 chr5 38783261 38783505 + 54.4 0.000 intron (NR_109951, intron 2 of 3) MIR3|SINE|MIR 62446 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA chr3-29 chr3 134364326 134364570 + 54.4 0.000 intron (NM_001278683, intron 5 of 9) intron (NM_001278683, intron 5 of 9) 3414 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr19-117 chr19 48720870 48721114 + 54.4 0.000 exon (NM_017805, exon 12 of 12) exon (NM_017805, exon 12 of 12) -1267 NM_001130915 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding chr12-91 chr12 67828018 67828262 + 54.4 0.000 Intergenic Intergenic -98665 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr1-61 chr1 45583306 45583550 + 54.3 0.000 promoter-TSS (NM_001195193) promoter-TSS (NM_001195193) -560 NM_001195193 4678 Hs.319334 NM_002482 ENSG00000132780 NASP FLB7527|HMDRA1|PRO1999 nuclear autoantigenic sperm protein protein-coding chr7-63 chr7 16645860 16646104 + 54.3 0.000 promoter-TSS (NM_001159767) promoter-TSS (NM_001159767) -152 NM_001159767 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr14-14 chr14 35292161 35292405 + 54.3 0.000 promoter-TSS (NM_002791) promoter-TSS (NM_002791) -34 NR_104110 5687 Hs.446260 NM_002791 ENSG00000100902 PSMA6 IOTA|PROS27|p27K proteasome subunit alpha 6 protein-coding chr7-56 chr7 101244822 101245066 + 54.1 0.000 intron (NM_016068, intron 1 of 4) CpG 137 NM_016068 51024 Hs.423968 NM_016068 ENSG00000214253 FIS1 CGI-135|TTC11 fission, mitochondrial 1 protein-coding chr11-90 chr11 74949045 74949289 + 54.1 0.000 promoter-TSS (NM_182969) promoter-TSS (NM_182969) -76 NM_001270381 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr6-5 chr6 41072759 41073003 + 54.1 0.000 promoter-TSS (NM_001329692) promoter-TSS (NM_001329692) -93 NM_021705 4800 Hs.10441 NM_002505 ENSG00000001167 NFYA CBF-A|CBF-B|HAP2|NF-YA nuclear transcription factor Y subunit alpha protein-coding chr11-61 chr11 859684 859928 + 54.1 0.000 intron (NM_001025235, intron 3 of 8) intron (NM_001025235, intron 3 of 8) 15360 NM_001025237 7106 Hs.654836 NM_003271 ENSG00000214063 TSPAN4 NAG-2|NAG2|TETRASPAN|TM4SF7|TSPAN-4 tetraspanin 4 protein-coding chr21-16 chr21 33542717 33542961 + 54.1 0.000 promoter-TSS (NM_032195) promoter-TSS (NM_032195) 50 NM_001136005 2618 Hs.473648 NM_000819 ENSG00000159131 GART AIRS|GARS|GARTF|PAIS|PGFT|PRGS phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase protein-coding chr5-36 chr5 176388687 176388931 + 54.0 0.000 promoter-TSS (NM_001317975) promoter-TSS (NM_001317975) 58 NM_138820 192286 Hs.534575 NM_138820 ENSG00000146066 HIGD2A RCF1b HIG1 hypoxia inducible domain family member 2A protein-coding chr10-55 chr10 84424817 84425061 + 54.0 0.000 promoter-TSS (NM_001284243) promoter-TSS (NM_001284243) 0 NM_001284243 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr12-14 chr12 112125382 112125626 + 53.8 0.000 promoter-TSS (NM_001143906) promoter-TSS (NM_001143906) -41 NM_001143906 10906 Hs.5148 NM_006700 ENSG00000135148 TRAFD1 FLN29 TRAF-type zinc finger domain containing 1 protein-coding chr6-111 chr6 7827266 7827510 + 53.8 0.000 intron (NM_001718, intron 1 of 6) intron (NM_001718, intron 1 of 6) 82689 NM_001145549 81567 Hs.150837 NM_022085 ENSG00000239264 TXNDC5 ENDOPDI|ERP46|HCC-2|HCC2|PDIA15|STRF8|UNQ364 thioredoxin domain containing 5 protein-coding chr10-54 chr10 70405533 70405777 + 53.8 0.000 intron (NM_004096, intron 1 of 2) intron (NM_004096, intron 1 of 2) 1510 NM_004096 1979 Hs.621200 NM_004096 ENSG00000148730 EIF4EBP2 4EBP2|PHASII eukaryotic translation initiation factor 4E binding protein 2 protein-coding chr6-37 chr6 13711951 13712195 + 53.8 0.000 promoter-TSS (NM_005493) promoter-TSS (NM_005493) -238 NM_005493 10048 Hs.708182 NM_005493 ENSG00000010017 RANBP9 BPM-L|BPM90|RANBPM|RanBP7 RAN binding protein 9 protein-coding chr19-41 chr19 35644415 35644659 + 53.8 0.000 intron (NM_014209, intron 6 of 6) CpG-14290 2792 NM_014209 2116 Hs.194061 NM_014209 ENSG00000105672 ETV2 ER71|ETSRP71 ETS variant 2 protein-coding chr12-29 chr12 6336402 6336646 + 53.8 0.000 intron (NR_144351, intron 1 of 8) intron (NR_144351, intron 1 of 8) 5552 NM_001346091 7132 Hs.279594 NM_001065 ENSG00000067182 TNFRSF1A CD120a|FPF|TBP1|TNF-R|TNF-R-I|TNF-R55|TNFAR|TNFR1|TNFR55|TNFR60|p55|p55-R|p60 TNF receptor superfamily member 1A protein-coding chr19-158 chr19 53867560 53867804 + 53.7 0.000 promoter-TSS (NM_001290191) promoter-TSS (NM_001290191) -183 NM_001020819 91663 Hs.380906 NM_138373 ENSG00000179820 MYADM SB135 myeloid associated differentiation marker protein-coding chr22-23 chr22 20858788 20859032 + 53.7 0.000 promoter-TSS (NM_001362863) promoter-TSS (NM_001362863) -97 NM_004782 9342 Hs.108002 NM_004782 ENSG00000099940 SNAP29 CEDNIK|SNAP-29 synaptosome associated protein 29 protein-coding chr5-77 chr5 43078999 43079243 + 53.7 0.000 intron (NR_102752, intron 2 of 2) LTR23|LTR|ERV1 -11682 NR_104651 648987 Hs.649468 NR_034085 ENSG00000177738 LOC648987 - uncharacterized LOC648987 ncRNA chr7-94 chr7 32204384 32204628 + 53.7 0.000 intron (NM_001322059, intron 2 of 17) intron (NM_001322059, intron 2 of 17) 94822 NM_001322058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-137 chr1 145979488 145979732 + 53.5 0.000 TTS (NM_001330685) TTS (NM_001330685) 14920 NM_032305 84265 Hs.591456 NM_032305 ENSG00000121851 POLR3GL RPC32HOM|flj32422 RNA polymerase III subunit G like protein-coding chr19-128 chr19 11559175 11559419 + 53.5 0.000 promoter-TSS (NM_032377) promoter-TSS (NM_032377) -61 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr16-83 chr16 4293953 4294197 + 53.5 0.000 Intergenic Intergenic -20686 NM_001318918 84662 Hs.592087 NM_032575 ENSG00000126603 GLIS2 NKL|NPHP7 GLIS family zinc finger 2 protein-coding chr11-189 chr11 64270088 64270332 + 53.5 0.000 TTS (NM_000932) TTS (NM_000932) -14129 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr11-102 chr11 34438625 34438869 + 53.5 0.000 promoter-TSS (NM_001752) promoter-TSS (NM_001752) -187 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr10-90 chr10 98361233 98361477 + 53.4 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 33952 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr2-29 chr2 9423251 9423495 + 53.4 0.000 promoter-TSS (NM_001321834) promoter-TSS (NM_001321834) 155 NR_134956 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr2-44 chr2 130342682 130342926 + 53.2 0.000 promoter-TSS (NM_001321119) promoter-TSS (NM_001321119) -123 NM_001321118 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr19-72 chr19 37907010 37907254 + 53.2 0.000 promoter-TSS (NM_001291088) promoter-TSS (NM_001291088) -76 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr20-27 chr20 23350418 23350662 + 53.2 0.000 promoter-TSS (NM_013248) promoter-TSS (NM_013248) -251 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr13-26 chr13 110799738 110799982 + 53.1 0.000 Intergenic Intergenic 13224 NR_135280 283486 Hs.447504 NR_135280 ENSG00000259831 LINC00567 - long intergenic non-protein coding RNA 567 ncRNA chr19-180 chr19 45406409 45406653 + 53.1 0.000 promoter-TSS (NM_001297590) promoter-TSS (NM_001297590) -113 NM_012099 10849 Hs.710495 NM_012099 ENSG00000117877 CD3EAP ASE-1|ASE1|CAST|PAF49 CD3e molecule associated protein protein-coding chr8-36 chr8 86508472 86508716 + 53.1 0.000 promoter-TSS (NM_016033) promoter-TSS (NM_016033) 92 NM_016033 51115 Hs.145386 NM_016033 ENSG00000176623 RMDN1 CGI-90|FAM82B|RMD-1|RMD1 regulator of microtubule dynamics 1 protein-coding chr19-262 chr19 12294713 12294957 + 52.9 0.000 promoter-TSS (NM_001164276) promoter-TSS (NM_001164276) 48 NM_001353550 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr16-105 chr16 57300423 57300667 + 52.9 0.000 Intergenic tRNA-Leu-CTG|tRNA|tRNA -15873 NM_015993 51090 Hs.632215 NM_015993 ENSG00000102934 PLLP PMLP|TM4SF11 plasmolipin protein-coding chr17-71 chr17 13018046 13018290 + 52.9 0.000 promoter-TSS (NM_018127) promoter-TSS (NM_018127) -104 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr10-49 chr10 95693913 95694157 + 52.9 0.000 promoter-TSS (NM_015631) promoter-TSS (NM_015631) -108 NM_015631 26123 Hs.438991 NM_015631 ENSG00000119977 TCTN3 C10orf61|JBTS18|OFD4|TECT3 tectonic family member 3 protein-coding chrX-6 chrX 153928264 153928508 + 52.9 0.000 TTS (NM_001256120) TTS (NM_001256120) -2122 NM_001666 393 Hs.701324 NM_001666 ENSG00000089820 ARHGAP4 C1|RGC1|RhoGAP4|SrGAP4|p115 Rho GTPase activating protein 4 protein-coding chr3-79 chr3 142976745 142976989 + 52.8 0.000 intron (NR_125393, intron 2 of 4) intron (NR_125393, intron 2 of 4) 12809 NR_125393 101927832 Hs.710007 NR_125393 ENSG00000241570 PAQR9-AS1 - PAQR9 antisense RNA 1 ncRNA chr16-50 chr16 69726444 69726688 + 52.8 0.000 promoter-TSS (NM_001025433) promoter-TSS (NM_001025433) -6 NM_000903 1728 Hs.406515 NM_000903 ENSG00000181019 NQO1 DHQU|DIA4|DTD|NMOR1|NMORI|QR1 NAD(P)H quinone dehydrogenase 1 protein-coding chr8-20 chr8 65645023 65645267 + 52.8 0.000 intron (NM_001145839, intron 1 of 6) CpG 411 NM_014637 9650 Hs.584788 NM_014637 ENSG00000066855 MTFR1 CHPPR|FAM54A2 mitochondrial fission regulator 1 protein-coding chr2-40 chr2 231514262 231514506 + 52.5 0.000 promoter-TSS (NR_024079) promoter-TSS (NR_024079) -45 NR_024079 151477 Hs.375211 NM_173513 ENSG00000181798 LINC00471 C2orf52 long intergenic non-protein coding RNA 471 ncRNA chr2-208 chr2 109514109 109514353 + 52.5 0.000 Intergenic Intergenic 99436 NM_001321513 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr3-26 chr3 133573350 133573594 + 52.5 0.000 promoter-TSS (NM_017548) promoter-TSS (NM_017548) -214 NM_017548 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr8-32 chr8 30540030 30540274 + 52.3 0.000 intron (NM_001008710, intron 5 of 8) intron (NM_001008710, intron 5 of 8) -98428 NM_001206847 100507341 Hs.659493 NM_001206847 ENSG00000253457 SMIM18 - small integral membrane protein 18 protein-coding chr19-135 chr19 55605256 55605500 + 52.3 0.000 Intergenic CpG 5090 NM_153219 147807 Hs.440291 NM_153219 ENSG00000171443 ZNF524 - zinc finger protein 524 protein-coding chr9-18 chr9 126914616 126914860 + 52.3 0.000 promoter-TSS (NM_001366399) promoter-TSS (NM_001366399) -36 NM_001190729 9649 Hs.432842 NM_014636 ENSG00000136828 RALGPS1 RALGEF2|RALGPS1A Ral GEF with PH domain and SH3 binding motif 1 protein-coding chr4-25 chr4 49644553 49644797 + 52.3 0.000 Intergenic (GAATG)n|Satellite|Satellite 658033 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr17-52 chr17 28812574 28812818 + 52.2 0.000 promoter-TSS (NM_001288634) promoter-TSS (NM_001288634) -225 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr6-25 chr6 136250330 136250574 + 52.2 0.000 promoter-TSS (NM_138419) promoter-TSS (NM_138419) -141 NM_001318738 113115 Hs.121536 NM_138419 ENSG00000146410 MTFR2 DUFD1|FAM54A mitochondrial fission regulator 2 protein-coding chr9-49 chr9 120714410 120714654 + 52.2 0.000 promoter-TSS (NM_001080497) promoter-TSS (NM_001080497) -62 NM_001080497 1955 Hs.744903 NM_001080497 ENSG00000106780 MEGF9 EGFL5 multiple EGF like domains 9 protein-coding chr7-86 chr7 44848144 44848388 + 52.0 0.000 promoter-TSS (NM_201517) promoter-TSS (NM_201517) -140 NM_201517 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding chr10-84 chr10 133689287 133689531 + 51.7 0.000 Intergenic BSR/Beta|Satellite|Satellite -62614 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding chr16-71 chr16 29811282 29811526 + 51.7 0.000 promoter-TSS (NM_145239) promoter-TSS (NM_145239) -789 NM_145239 112476 Hs.655071 NM_145239 ENSG00000167371 PRRT2 BFIC2|BFIS2|DSPB3|DYT10|EKD1|FICCA|ICCA|IFITMD1|PKC proline rich transmembrane protein 2 protein-coding chr2-155 chr2 241702416 241702660 + 51.7 0.000 intron (NM_032329, intron 1 of 7) CpG 499 NM_001330162 84289 Hs.529172 NM_032329 ENSG00000168395 ING5 p28ING5 inhibitor of growth family member 5 protein-coding chr16-128 chr16 67055829 67056073 + 51.7 0.000 intron (NM_001368708, intron 3 of 4) intron (NM_001368708, intron 3 of 4) 26802 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding chr1-228 chr1 32394564 32394808 + 51.7 0.000 promoter-TSS (NR_125352) promoter-TSS (NR_125352) -245 NR_125352 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr1-173 chr1 19659772 19660016 + 51.6 0.000 Intergenic Intergenic -4981 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr1-88 chr1 109426302 109426546 + 51.6 0.000 promoter-TSS (NM_001199773) promoter-TSS (NM_001199773) 24 NM_002790 5686 Hs.485246 NM_002790 ENSG00000143106 PSMA5 PSC5|ZETA proteasome subunit alpha 5 protein-coding chr15-15 chr15 72117614 72117858 + 51.6 0.000 promoter-TSS (NM_145204) promoter-TSS (NM_145204) 414 NM_006901 4649 Hs.513000 NM_006901 ENSG00000066933 MYO9A CMS24 myosin IXA protein-coding chr14-63 chr14 67816515 67816759 + 51.6 0.000 promoter-TSS (NM_015346) promoter-TSS (NM_015346) -47 NM_015346 23503 Hs.98041 NM_015346 ENSG00000072121 ZFYVE26 FYVE-CENT|SPG15 zinc finger FYVE-type containing 26 protein-coding chr2-124 chr2 20149333 20149577 + 51.6 0.000 Intergenic MIRb|SINE|MIR 75675 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2-71 chr2 23617478 23617722 + 51.4 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 232421 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr10-51 chr10 110918579 110918823 + 51.4 0.000 promoter-TSS (NR_136749) promoter-TSS (NR_136749) 235 NM_001195306 92482 Hs.232543 NM_001195304 ENSG00000214413 BBIP1 BBIP10|BBS18|NCRNA00081|bA348N5.3 BBSome interacting protein 1 protein-coding chr5-65 chr5 38872279 38872523 + 51.4 0.000 intron (NM_003999, intron 2 of 17) L2c|LINE|L2 26389 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr11-115 chr11 61871247 61871491 + 51.4 0.000 Intergenic Intergenic 6909 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr15-63 chr15 36428271 36428515 + 51.4 0.000 Intergenic Intergenic -151233 NM_001321761 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr4-42 chr4 42657197 42657441 + 51.3 0.000 promoter-TSS (NM_006095) promoter-TSS (NM_006095) -214 NM_006095 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding chr19-150 chr19 43575457 43575701 + 51.3 0.000 promoter-TSS (NM_006297) promoter-TSS (NM_006297) -1 NM_006297 7515 Hs.98493 NM_006297 ENSG00000073050 XRCC1 RCC|SCAR26 X-ray repair cross complementing 1 protein-coding chr11-131 chr11 75554381 75554625 + 51.3 0.000 Intergenic Intergenic -7750 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr5-58 chr5 140647561 140647805 + 51.3 0.000 promoter-TSS (NM_006083) promoter-TSS (NM_006083) 102 NM_001185012 4695 Hs.75914 NM_002488 ENSG00000131495 NDUFA2 B8|CD14|CIB8|MC1DN13 NADH:ubiquinone oxidoreductase subunit A2 protein-coding chr19-99 chr19 36054099 36054343 + 51.3 0.000 promoter-TSS (NM_173636) promoter-TSS (NM_173636) 64 NM_152658 199745 Hs.350209 NM_152658 ENSG00000161277 THAP8 - THAP domain containing 8 protein-coding chr10-37 chr10 104232217 104232461 + 51.1 0.000 promoter-TSS (NM_025145) promoter-TSS (NM_025145) 38 NM_025145 80217 Hs.288927 NM_025145 ENSG00000197748 CFAP43 C10orf79|SPGF19|WDR96|bA373N18.2 cilia and flagella associated protein 43 protein-coding chr1-194 chr1 206535210 206535454 + 51.1 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) -21832 NM_182665 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr17-146 chr17 29132062 29132306 + 51.1 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 8205 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr2-45 chr2 61853833 61854077 + 51.1 0.000 exon (NM_001201543, exon 1 of 7) exon (NM_001201543, exon 1 of 7) 105 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr3-76 chr3 150546508 150546752 + 51.0 0.000 promoter-TSS (NM_001319046) promoter-TSS (NM_001319046) -48 NM_001319043 83939 Hs.655782 NM_032025 ENSG00000144895 EIF2A CDA02|EIF-2A|MST089|MSTP004|MSTP089 eukaryotic translation initiation factor 2A protein-coding chr5-76 chr5 31532037 31532281 + 51.0 0.000 promoter-TSS (NM_001100412) promoter-TSS (NM_001100412) -66 NM_013235 29102 Hs.97997 NM_013235 ENSG00000113360 DROSHA ETOHI2|HSA242976|RANSE3L|RN3|RNASE3L|RNASEN drosha ribonuclease III protein-coding chr19-129 chr19 15223369 15223613 + 51.0 0.000 Intergenic CpG 8957 NM_024794 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr9-102 chr9 99254002 99254246 + 51.0 0.000 Intergenic Intergenic 31842 NM_006808 10952 Hs.191887 NM_006808 ENSG00000106803 SEC61B - SEC61 translocon beta subunit protein-coding chr18-11 chr18 3448139 3448383 + 50.8 0.000 intron (NM_173207, intron 1 of 2) CpG 719 NM_173207 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr2-184 chr2 31401692 31401936 + 50.8 0.000 intron (NM_000379, intron 3 of 35) intron (NM_000379, intron 3 of 35) 12928 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr10-101 chr10 369959 370203 + 50.8 0.000 intron (NM_014974, intron 17 of 36) intron (NM_014974, intron 17 of 36) 190087 NM_001202468 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr16-68 chr16 89301690 89301934 + 50.8 0.000 intron (NR_045839, intron 5 of 9) intron (NR_045839, intron 5 of 9) 5684 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr9-120 chr9 129110968 129111212 + 50.8 0.000 promoter-TSS (NM_001271832) promoter-TSS (NM_001271832) 140 NM_021131 5524 Hs.400740 NM_021131 ENSG00000119383 PTPA PP2A|PPP2R4|PR53 protein phosphatase 2 phosphatase activator protein-coding chr20-5 chr20 49278032 49278276 + 50.7 0.000 promoter-TSS (NR_036659) promoter-TSS (NR_036659) -24 NR_003605 441951 Hs.356766 NR_003604 ENSG00000177410 ZFAS1 C20orf199|HSUP1|HSUP2|NCRNA00275|ZNFX1-AS1 ZNFX1 antisense RNA 1 ncRNA chr2-78 chr2 102064270 102064514 + 50.7 0.000 Intergenic Intergenic -5998 NM_001320978 3554 Hs.701982 NM_000877 ENSG00000115594 IL1R1 CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80 interleukin 1 receptor type 1 protein-coding chr15-21 chr15 82262500 82262744 + 50.7 0.000 promoter-TSS (NM_001348700) promoter-TSS (NM_001348700) -94 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr5-92 chr5 140691144 140691388 + 50.7 0.000 promoter-TSS (NM_001363535) promoter-TSS (NM_001363535) 104 NM_002109 3035 Hs.528050 NM_002109 ENSG00000170445 HARS CMT2W|HRS|USH3B histidyl-tRNA synthetase protein-coding chr19-141 chr19 55407817 55408061 + 50.7 0.000 promoter-TSS (NM_014501) promoter-TSS (NM_014501) -151 NM_014501 27338 Hs.396393 NM_014501 ENSG00000108106 UBE2S E2-EPF|E2EPF|EPF5 ubiquitin conjugating enzyme E2 S protein-coding chr1-62 chr1 230978846 230979090 + 50.7 0.000 promoter-TSS (NM_001346992) promoter-TSS (NM_001346992) -107 NM_024525 79573 Hs.424788 NM_024525 ENSG00000143643 TTC13 - tetratricopeptide repeat domain 13 protein-coding chr11-47 chr11 64241098 64241342 + 50.7 0.000 promoter-TSS (NM_001370360) promoter-TSS (NM_001370360) 88 NM_001135208 2286 Hs.227729 NM_004470 ENSG00000173486 FKBP2 FKBP-13|FKBP13|PPIase FKBP prolyl isomerase 2 protein-coding chr4-26 chr4 158671981 158672225 + 50.5 0.000 promoter-TSS (NM_004453) promoter-TSS (NM_004453) 2 NM_001281737 2110 Hs.155729 NM_004453 ENSG00000171503 ETFDH ETFQO|MADD electron transfer flavoprotein dehydrogenase protein-coding chr7-75 chr7 64665939 64666183 + 50.5 0.000 promoter-TSS (NM_001282359) promoter-TSS (NM_001282359) -22 NM_001282360 51427 Hs.50216 NM_016220 ENSG00000196247 ZNF107 Y8|ZFD25|ZNF588|smap-7 zinc finger protein 107 protein-coding chr12-57 chr12 75391041 75391285 + 50.4 0.000 promoter-TSS (NM_001355025) promoter-TSS (NM_001355025) 74 NM_001270396 144321 Hs.406728 NM_152436 ENSG00000180481 GLIPR1L2 - GLIPR1 like 2 protein-coding chr7-71 chr7 91264367 91264611 + 50.4 0.000 promoter-TSS (NM_003505) promoter-TSS (NM_003505) 56 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr16-81 chr16 70289418 70289662 + 50.4 0.000 promoter-TSS (NM_001257174) promoter-TSS (NM_001257174) -31 NM_001605 16 Hs.315137 NM_001605 ENSG00000090861 AARS CMT2N|EIEE29 alanyl-tRNA synthetase protein-coding chr15-37 chr15 80072378 80072622 + 50.4 0.000 promoter-TSS (NM_001242915) promoter-TSS (NM_001242915) -61 NM_001242915 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding chr11-108 chr11 834888 835132 + 50.4 0.000 intron (NM_004357, intron 2 of 8) intron (NM_004357, intron 2 of 8) 2058 NM_004357 977 Hs.654379 NM_004357 ENSG00000177697 CD151 GP27|MER2|PETA-3|RAPH|SFA1|TSPAN24 CD151 molecule (Raph blood group) protein-coding chr22-16 chr22 46250182 46250426 + 50.4 0.000 promoter-TSS (NM_207327) promoter-TSS (NM_207327) -11 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr9-107 chr9 36276904 36277148 + 50.2 0.000 promoter-TSS (NM_001128227) promoter-TSS (NM_001128227) 30 NM_001190388 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chr13-41 chr13 113837101 113837345 + 50.2 0.000 intron (NM_000820, intron 6 of 14) intron (NM_000820, intron 6 of 14) 21613 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr12-26 chr12 6753495 6753739 + 50.2 0.000 promoter-TSS (NM_005439) promoter-TSS (NM_005439) -476 NR_026581 8079 Hs.524214 NM_005439 ENSG00000089693 MLF2 NTN4 myeloid leukemia factor 2 protein-coding chr6-20 chr6 87472980 87473224 + 50.0 0.000 intron (NM_001168398, intron 1 of 6) CpG 128 NM_006416 10559 Hs.423163 NM_006416 ENSG00000164414 SLC35A1 CDG2F|CMPST|CST|hCST solute carrier family 35 member A1 protein-coding chr22-58 chr22 37791835 37792079 + 50.0 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -13150 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr8-16 chr8 140464401 140464645 + 50.0 0.000 Intergenic CpG -5944 NM_031466 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding chr6-74 chr6 158488102 158488346 + 49.9 0.000 intron (NM_020245, intron 8 of 13) intron (NM_020245, intron 8 of 13) -48212 NM_020823 57583 Hs.99145 NM_020823 ENSG00000146433 TMEM181 GPR178|KIAA1423 transmembrane protein 181 protein-coding chr6-12 chr6 53359413 53359657 + 49.9 0.000 Intergenic CpG -10356 NM_001242830 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr1-98 chr1 153958568 153958812 + 49.9 0.000 promoter-TSS (NM_181715) promoter-TSS (NM_181715) -78 NM_181715 200186 Hs.406392 NM_181715 ENSG00000160741 CRTC2 TORC-2|TORC2 CREB regulated transcription coactivator 2 protein-coding chr1-85 chr1 42767026 42767270 + 49.9 0.000 promoter-TSS (NM_024097) promoter-TSS (NM_024097) -64 NM_022356 64175 Hs.720014 NM_022356 ENSG00000117385 P3H1 GROS1|LEPRE1|OI8 prolyl 3-hydroxylase 1 protein-coding chr19-205 chr19 42113639 42113883 + 49.9 0.000 intron (NM_001207026, intron 5 of 12) L2b|LINE|L2 18685 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr19-162 chr19 11738986 11739230 + 49.9 0.000 promoter-TSS (NM_017507) promoter-TSS (NM_017507) -162 NM_017507 55552 Hs.142167 NM_017507 ENSG00000197933 ZNF823 HSZFP36 zinc finger protein 823 protein-coding chr3-192 chr3 19889327 19889571 + 49.7 0.000 intron (NM_001330688, intron 11 of 14) HERVL40-int|LTR|ERVL 44768 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr1-128 chr1 169794787 169795031 + 49.7 0.000 promoter-TSS (NM_001366771) promoter-TSS (NM_001366771) -2 NM_033418 92342 Hs.33922 NM_033418 ENSG00000171806 METTL18 AsTP2|C1orf156|HPM1 methyltransferase like 18 protein-coding chr2-86 chr2 234949809 234950053 + 49.7 0.000 Intergenic Intergenic -2086 NM_014521 23677 Hs.516777 NM_014521 ENSG00000130147 SH3BP4 BOG25|TTP SH3 domain binding protein 4 protein-coding chr22-95 chr22 31496195 31496439 + 49.6 0.000 promoter-TSS (NM_001258327) promoter-TSS (NM_001258327) 178 NM_001258325 9814 Hs.62209 NM_014775 ENSG00000198089 SFI1 PISD|PPP1R139|hSfi1p SFI1 centrin binding protein protein-coding chr9-21 chr9 136346029 136346273 + 49.6 0.000 intron (NM_001145638, intron 9 of 13) intron (NM_001145638, intron 9 of 13) -6906 NM_001145639 26086 Hs.239370 NM_015597 ENSG00000160360 GPSM1 AGS3 G protein signaling modulator 1 protein-coding chr17-59 chr17 57662993 57663237 + 49.6 0.000 intron (NM_138962, intron 11 of 13) intron (NM_138962, intron 11 of 13) -54703 NR_110807 101927539 Hs.680439 NR_110807 ENSG00000263499 LOC101927539 - uncharacterized LOC101927539 ncRNA chr1-72 chr1 201170801 201171045 + 49.6 0.000 intron (NM_001288564, intron 1 of 5) CpG 659 NM_001288564 252839 Hs.181444 NM_016456 ENSG00000116857 TMEM9 DERM4|TMEM9A transmembrane protein 9 protein-coding chr22-108 chr22 37905052 37905296 + 49.6 0.000 Intergenic Intergenic -1123 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr18-27 chr18 76460006 76460250 + 49.6 0.000 intron (NM_014643, intron 2 of 6) intron (NM_014643, intron 2 of 6) -31524 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr2-16 chr2 44168587 44168831 + 49.6 0.000 promoter-TSS (NM_002706) promoter-TSS (NM_002706) -94 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr9-57 chr9 86354264 86354508 + 49.6 0.000 promoter-TSS (NM_024617) promoter-TSS (NM_024617) 24 NM_001185059 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr6-85 chr6 152301941 152302185 + 49.4 0.000 exon (NM_033071, exon 91 of 146) exon (NM_033071, exon 91 of 146) -78467 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr3-41 chr3 98522878 98523122 + 49.4 0.000 promoter-TSS (NM_001040182) promoter-TSS (NM_001040182) 66 NM_001040199 56650 Hs.531371 NM_019895 ENSG00000080822 CLDND1 C3orf4|GENX-3745|Z38 claudin domain containing 1 protein-coding chr9-130 chr9 107282942 107283186 + 49.4 0.000 promoter-TSS (NM_002874) promoter-TSS (NM_002874) -215 NM_002874 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr19-71 chr19 21851985 21852229 + 49.3 0.000 promoter-TSS (NM_001256648) promoter-TSS (NM_001256648) -39 NM_001256653 7594 Hs.534365 NM_003423 ENSG00000198521 ZNF43 HTF6|KOX27|ZNF39L1 zinc finger protein 43 protein-coding chr5-44 chr5 150036548 150036792 + 49.3 0.000 exon (NM_001366501, exon 11 of 19) exon (NM_001366501, exon 11 of 19) 35931 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr22-116 chr22 29267998 29268242 + 49.3 0.000 promoter-TSS (NM_001163287) promoter-TSS (NM_001163287) 43 NM_001329536 25807 Hs.106730 NM_012265 ENSG00000100263 RHBDD3 C22orf3|HS984G1A|PTAG rhomboid domain containing 3 protein-coding chr19-228 chr19 37217882 37218126 + 49.3 0.000 promoter-TSS (NM_001345947) promoter-TSS (NM_001345947) -210 NM_001345947 163087 Hs.590975 NM_152604 ENSG00000188283 ZNF383 HSD17 zinc finger protein 383 protein-coding chr10-78 chr10 82190695 82190939 + 49.1 0.000 intron (NM_001165973, intron 2 of 10) MLT1L|LTR|ERVL-MaLR 42103 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr11-101 chr11 34105380 34105624 + 49.1 0.000 promoter-TSS (NM_024662) promoter-TSS (NM_024662) -127 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding chr15-12 chr15 63048117 63048361 + 49.1 0.000 promoter-TSS (NM_001365782) promoter-TSS (NM_001365782) -250 NM_001018008 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr10-36 chr10 103659994 103660238 + 49.1 0.000 intron (NM_001365079, intron 2 of 8) intron (NM_001365079, intron 2 of 8) 18099 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr10-30 chr10 71851188 71851432 + 49.1 0.000 promoter-TSS (NM_002778) promoter-TSS (NM_002778) -59 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr5-98 chr5 138178680 138178924 + 49.1 0.000 promoter-TSS (NM_001300962) promoter-TSS (NM_001300962) -133 NM_001164326 10902 Hs.519337 NM_006696 ENSG00000112983 BRD8 SMAP|SMAP2|p120 bromodomain containing 8 protein-coding chr11-212 chr11 34302544 34302788 + 49.1 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 55344 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr17-47 chr17 41688658 41688902 + 49.1 0.000 promoter-TSS (NM_005801) promoter-TSS (NM_005801) -105 NM_005801 10209 Hs.150580 NM_005801 ENSG00000173812 EIF1 A121|EIF-1|EIF1A|ISO1|SUI1 eukaryotic translation initiation factor 1 protein-coding chr17-105 chr17 18183500 18183744 + 49.1 0.000 promoter-TSS (NM_017758) promoter-TSS (NM_017758) -206 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr11-184 chr11 83286022 83286266 + 49.1 0.000 exon (NM_001286116, exon 1 of 9) exon (NM_001286116, exon 1 of 9) 263 NM_001286117 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr6-21 chr6 20401620 20401864 + 49.0 0.000 promoter-TSS (NM_001949) promoter-TSS (NM_001949) -137 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding chr19-143 chr19 1566695 1566939 + 49.0 0.000 intron (NM_203304, intron 1 of 1) CpG 1241 NM_203304 399664 Hs.436495 NM_203304 ENSG00000181588 MEX3D MEX-3D|MEX3|OK/SW-cl.4|RKHD1|RNF193|TINO mex-3 RNA binding family member D protein-coding chr10-117 chr10 72009500 72009744 + 49.0 0.000 3' UTR (NM_004273, exon 3 of 3) 3' UTR (NM_004273, exon 3 of 3) 45227 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr9-77 chr9 35114208 35114452 + 48.8 0.000 intron (NM_025182, intron 1 of 8) intron (NM_025182, intron 1 of 8) 1532 NR_134455 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr22-60 chr22 36529149 36529393 + 48.8 0.000 promoter-TSS (NM_003753) promoter-TSS (NM_003753) -105 NR_156418 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding chr20-62 chr20 10434408 10434652 + 48.8 0.000 promoter-TSS (NM_170784) promoter-TSS (NM_170784) -291 NM_170784 8195 Hs.472119 NM_018848 ENSG00000125863 MKKS BBS6|HMCS|KMS|MKS McKusick-Kaufman syndrome protein-coding chr17-61 chr17 77958393 77958637 + 48.7 0.000 Intergenic CpG -45722 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding chr8-40 chr8 13574703 13574947 + 48.7 0.000 intron (NM_001348082, intron 1 of 16) intron (NM_001348082, intron 1 of 16) 7956 NM_001007090 157773 Hs.104941 NM_001007090 ENSG00000164743 C8orf48 - chromosome 8 open reading frame 48 protein-coding chrX-22 chrX 53422298 53422542 + 48.7 0.000 promoter-TSS (NM_144968) promoter-TSS (NM_144968) 308 NM_001281463 8243 Hs.211602 NM_006306 ENSG00000072501 SMC1A CDLS2|DXS423E|SB1.8|SMC1|SMC1L1|SMC1alpha|SMCB structural maintenance of chromosomes 1A protein-coding chr2-141 chr2 26244655 26244899 + 48.7 0.000 promoter-TSS (NM_001281513) promoter-TSS (NM_001281513) 29 NM_001281512 3032 Hs.515848 NM_000183 ENSG00000138029 HADHB ECHB|MSTP029|MTPB|TP-BETA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta protein-coding chr19-189 chr19 45902881 45903125 + 48.5 0.000 promoter-TSS (NM_001012643) promoter-TSS (NM_001012643) -390 NM_001012643 339344 Hs.515478 NM_001012643 ENSG00000176182 MYPOP P42pop Myb related transcription factor, partner of profilin protein-coding chr3-104 chr3 52670794 52671038 + 48.5 0.000 intron (NM_001366074, intron 5 of 30) MLT1J|LTR|ERVL-MaLR 14683 NM_001350077 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr12-113 chr12 45914209 45914453 + 48.5 0.000 Intergenic Intergenic 76243 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr15-56 chr15 72758209 72758453 + 48.5 0.000 intron (NM_001365225, intron 4 of 6) intron (NM_001365225, intron 4 of 6) -24504 NR_040107 100287559 Hs.562587 NR_040107 ENSG00000260898 ADPGK-AS1 - ADPGK antisense RNA 1 ncRNA chr15-131 chr15 74873081 74873325 + 48.5 0.000 exon (NM_005697, exon 1 of 9) exon (NM_005697, exon 1 of 9) 162 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr10-62 chr10 37857759 37858003 + 48.4 0.000 promoter-TSS (NR_147995) promoter-TSS (NR_147995) 203 NM_001352482 57209 Hs.528423 NM_021045 ENSG00000198105 ZNF248 bA162G10.3 zinc finger protein 248 protein-coding chr19-213 chr19 3185574 3185818 + 48.4 0.000 promoter-TSS (NM_001321463) promoter-TSS (NM_001321463) -234 NM_020170 56926 Hs.657032 NM_020170 ENSG00000125912 NCLN NET59 nicalin protein-coding chr19-199 chr19 51108308 51108552 + 48.4 0.000 promoter-TSS (NM_145232) promoter-TSS (NM_145232) -21 NM_145232 90353 Hs.148425 NM_145232 ENSG00000142544 CTU1 ATPBD3|NCS6 cytosolic thiouridylase subunit 1 protein-coding chr4-74 chr4 148442442 148442686 + 48.4 0.000 promoter-TSS (NM_001166104) promoter-TSS (NM_001166104) -150 NR_148974 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr5-72 chr5 77492161 77492405 + 48.2 0.000 promoter-TSS (NM_018268) promoter-TSS (NM_018268) 33 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr9-88 chr9 37465475 37465719 + 48.2 0.000 promoter-TSS (NM_014872) promoter-TSS (NM_014872) -147 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr5-26 chr5 134226061 134226305 + 48.1 0.000 promoter-TSS (NR_149151) promoter-TSS (NR_149151) -110 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr9-81 chr9 110125280 110125524 + 48.1 0.000 promoter-TSS (NM_001136562) promoter-TSS (NM_001136562) -99 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr11-132 chr11 83156692 83156936 + 48.1 0.000 promoter-TSS (NM_015885) promoter-TSS (NM_015885) -317 NM_015885 51585 Hs.128959 NM_015885 ENSG00000165494 PCF11 - PCF11 cleavage and polyadenylation factor subunit protein-coding chr4-94 chr4 55853554 55853798 + 48.1 0.000 promoter-TSS (NM_018261) promoter-TSS (NM_018261) 26 NM_018261 55763 Hs.269665 NM_018261 ENSG00000090989 EXOC1 BM-102|SEC3|SEC3L1|SEC3P exocyst complex component 1 protein-coding chr2-64 chr2 202375584 202375828 + 47.9 0.000 promoter-TSS (NM_001204) promoter-TSS (NM_001204) -621 NM_001204 659 Hs.471119 NM_001204 ENSG00000204217 BMPR2 BMPR-II|BMPR3|BMR2|BRK-3|POVD1|PPH1|T-ALK bone morphogenetic protein receptor type 2 protein-coding chr2-158 chr2 71227180 71227424 + 47.9 0.000 promoter-TSS (NM_020459) promoter-TSS (NM_020459) -199 NM_020459 400961 Hs.416735 NM_020459 ENSG00000124374 PAIP2B - poly(A) binding protein interacting protein 2B protein-coding chr1-162 chr1 6579672 6579916 + 47.9 0.000 promoter-TSS (NM_005341) promoter-TSS (NM_005341) -200 NM_001278647 3104 Hs.502330 NM_005341 ENSG00000204859 ZBTB48 HKR3|TZAP|ZNF855|pp9964 zinc finger and BTB domain containing 48 protein-coding chr3-125 chr3 86793850 86794094 + 47.9 0.000 Intergenic Intergenic 197177 NM_001320494 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr11-43 chr11 44565226 44565470 + 47.9 0.000 promoter-TSS (NM_002231) promoter-TSS (NM_002231) -315 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding chr14-56 chr14 80941684 80941928 + 47.8 0.000 promoter-TSS (NR_157142) promoter-TSS (NR_157142) -68 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding chr11-159 chr11 57322589 57322833 + 47.8 0.000 intron (NM_033396, intron 1 of 11) intron (NM_033396, intron 1 of 11) 2241 NM_033396 85456 Hs.530730 NM_033396 ENSG00000149115 TNKS1BP1 TAB182 tankyrase 1 binding protein 1 protein-coding chr17-167 chr17 26885317 26885561 + 47.8 0.000 Intergenic ALR/Alpha|Satellite|centr 203802 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr22-101 chr22 46229845 46230089 + 47.8 0.000 intron (NM_001001928, intron 6 of 7) intron (NM_001001928, intron 6 of 7) 20326 NM_207327 150383 Hs.103110 NM_207327 ENSG00000205643 CDPF1 C22orf40 cysteine rich DPF motif domain containing 1 protein-coding chr18-16 chr18 63970041 63970285 + 47.8 0.000 promoter-TSS (NM_001348367) promoter-TSS (NM_001348367) 82 NM_001366198 5271 Hs.368077 NM_002640 ENSG00000166401 SERPINB8 C18orf53|CAP2|PI-8|PI8|PSS5 serpin family B member 8 protein-coding chr1-259 chr1 54200059 54200303 + 47.8 0.000 promoter-TSS (NM_001353356) promoter-TSS (NM_001353356) 14 NM_001330602 51253 Hs.584908 NM_016491 ENSG00000116221 MRPL37 L2mt|L37mt|MRP-L2|MRP-L37|MRPL2|RPML2 mitochondrial ribosomal protein L37 protein-coding chr3-103 chr3 31004377 31004621 + 47.6 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -109838 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding chr19-102 chr19 48795390 48795634 + 47.6 0.000 intron (NM_001164773, intron 8 of 8) intron (NM_001164773, intron 8 of 8) 15517 NM_001164773 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr16-53 chr16 23641300 23641544 + 47.6 0.000 promoter-TSS (NM_024675) promoter-TSS (NM_024675) -44 NM_032486 84516 Hs.435941 NM_032486 ENSG00000166847 DCTN5 - dynactin subunit 5 protein-coding chr12-92 chr12 77065451 77065695 + 47.6 0.000 promoter-TSS (NM_203394) promoter-TSS (NM_203394) -4 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr12-55 chr12 52054337 52054581 + 47.6 0.000 exon (NM_001202233, exon 3 of 8) exon (NM_001202233, exon 3 of 8) 3017 NM_173157 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-167 chr1 85584123 85584367 + 47.6 0.000 TTS (NM_001554) TTS (NM_001554) 3484 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr20-31 chr20 45935283 45935527 + 47.6 0.000 intron (NM_022104, intron 1 of 16) intron (NM_022104, intron 1 of 16) 722 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr1-256 chr1 33472545 33472789 + 47.6 0.000 promoter-TSS (NM_145238) promoter-TSS (NM_145238) 22 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr17-240 chr17 6752579 6752823 + 47.5 0.000 Intergenic Intergenic -2746 NM_001353135 54739 Hs.441975 NM_017523 ENSG00000132530 XAF1 BIRC4BP|HSXIAPAF1|XIAPAF1 XIAP associated factor 1 protein-coding chr16-184 chr16 72291710 72291954 + 47.5 0.000 intron (NR_126330, intron 9 of 13) intron (NR_126330, intron 9 of 13) -119382 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr5-75 chr5 177546511 177546755 + 47.5 0.000 intron (NM_001190946, intron 1 of 8) intron (NM_001190946, intron 1 of 8) 7462 NM_001366500 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr1-235 chr1 50968261 50968505 + 47.5 0.000 promoter-TSS (NM_001262) promoter-TSS (NM_001262) -312 NM_001262 1031 Hs.525324 NM_001262 ENSG00000123080 CDKN2C INK4C|p18|p18-INK4C cyclin dependent kinase inhibitor 2C protein-coding chr18-29 chr18 9913554 9913798 + 47.5 0.000 promoter-TSS (NM_003574) promoter-TSS (NM_003574) -340 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr20-10 chr20 35454920 35455164 + 47.5 0.000 promoter-TSS (NR_031620) promoter-TSS (NR_031620) -293 NM_001319138 8200 Hs.1573 NM_000557 ENSG00000125965 GDF5 BDA1C|BMP-14|BMP14|CDMP1|LAP-4|LAP4|OS5|SYM1B|SYNS2 growth differentiation factor 5 protein-coding chr12-64 chr12 108515129 108515373 + 47.3 0.000 promoter-TSS (NM_007076) promoter-TSS (NM_007076) -26 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr4-24 chr4 6269562 6269806 + 47.3 0.000 promoter-TSS (NM_001145853) promoter-TSS (NM_001145853) -166 NM_006005 7466 Hs.518602 NM_006005 ENSG00000109501 WFS1 CTRCT41|WFRS|WFS|WFSL wolframin ER transmembrane glycoprotein protein-coding chr9-65 chr9 5628786 5629030 + 47.3 0.000 promoter-TSS (NM_020829) promoter-TSS (NM_020829) -199 NM_020829 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr1-121 chr1 161197131 161197375 + 47.3 0.000 intron (NM_005099, intron 1 of 8) intron (NM_005099, intron 1 of 8) 1801 NM_005099 9507 Hs.211604 NM_005099 ENSG00000158859 ADAMTS4 ADAMTS-2|ADAMTS-4|ADMP-1 ADAM metallopeptidase with thrombospondin type 1 motif 4 protein-coding chr9-79 chr9 95091665 95091909 + 47.3 0.000 Intergenic Intergenic -5693 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr2-150 chr2 151409849 151410093 + 47.3 0.000 promoter-TSS (NM_001177663) promoter-TSS (NM_001177663) 69 NM_001177663 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding chr6-97 chr6 129501561 129501805 + 47.2 0.000 intron (NM_000426, intron 58 of 64) intron (NM_000426, intron 58 of 64) 208494 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr19-186 chr19 17391030 17391274 + 47.2 0.000 Intergenic CpG -13810 NM_031310 83483 Hs.107125 NM_031310 ENSG00000130300 PLVAP DIAR10|FELS|PV-1|PV1|gp68 plasmalemma vesicle associated protein protein-coding chr7-112 chr7 87876300 87876544 + 47.2 0.000 promoter-TSS (NM_006716) promoter-TSS (NM_006716) -62 NM_018843 55972 Hs.208414 NM_018843 ENSG00000075303 SLC25A40 MCFP solute carrier family 25 member 40 protein-coding chr1-247 chr1 201904659 201904903 + 47.2 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 16104 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr13-32 chr13 31162269 31162513 + 47.2 0.000 promoter-TSS (NM_001349704) promoter-TSS (NM_001349704) -3 NM_001286505 10808 Hs.743267 NM_006644 ENSG00000120694 HSPH1 HSP105|HSP105A|HSP105B|NY-CO-25 heat shock protein family H (Hsp110) member 1 protein-coding chr2-58 chr2 130355878 130356122 + 47.0 0.000 promoter-TSS (NM_001142370) promoter-TSS (NM_001142370) -56 NM_014369 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr2-354 chr2 222656109 222656353 + 47.0 0.000 promoter-TSS (NM_005687) promoter-TSS (NM_005687) -139 NM_005687 10056 Hs.471452 NM_005687 ENSG00000116120 FARSB FARSLB|FRSB|HSPC173|NEDBLLA|PheHB|PheRS|RILDBC phenylalanyl-tRNA synthetase subunit beta protein-coding chr17-147 chr17 43170116 43170360 + 47.0 0.000 promoter-TSS (NM_001291572) promoter-TSS (NM_001291572) 165 NR_110868 101929767 Hs.640892 NR_110868 LOC101929767 - uncharacterized LOC101929767 ncRNA chr11-174 chr11 7192867 7193111 + 47.0 0.000 Intergenic L1MA9|LINE|L1 -41777 NR_031683 100313774 NR_031683 ENSG00000221703 MIR302E MIRN302E microRNA 302e ncRNA chr7-166 chr7 124992938 124993182 + 47.0 0.000 intron (NR_125719, intron 2 of 7) intron (NR_125719, intron 2 of 7) -63077 NR_003104 25913 Hs.31968 NM_015450 ENSG00000128513 POT1 CMM10|GLM9|HPOT1 protection of telomeres 1 protein-coding chr2-72 chr2 27370269 27370513 + 46.9 0.000 promoter-TSS (NM_001318965) promoter-TSS (NM_001318965) -62 NM_001318966 8890 Hs.169474 NM_015636 ENSG00000115211 EIF2B4 EIF-2B|EIF2B|EIF2Bdelta eukaryotic translation initiation factor 2B subunit delta protein-coding chr3-78 chr3 142225429 142225673 + 46.9 0.000 promoter-TSS (NR_033289) promoter-TSS (NR_033289) 34 NM_001039547 256356 Hs.135904 NM_152776 ENSG00000175066 GK5 - glycerol kinase 5 protein-coding chr10-70 chr10 70267457 70267701 + 46.9 0.000 intron (NM_022146, intron 1 of 3) intron (NM_022146, intron 1 of 3) 16425 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr9-116 chr9 13139904 13140148 + 46.9 0.000 exon (NM_001330637, exon 28 of 47) exon (NM_001330637, exon 28 of 47) 139538 NM_001261406 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr6-36 chr6 169386544 169386788 + 46.9 0.000 Intergenic MIR3|SINE|MIR -132552 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr3-146 chr3 27533901 27534145 + 46.9 0.000 Intergenic Intergenic -49639 NM_001321103 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr19-195 chr19 5790660 5790904 + 46.7 0.000 intron (NM_020175, intron 1 of 12) CpG 381 NM_020175 56931 Hs.284297 NM_020175 ENSG00000141994 DUS3L DUS3 dihydrouridine synthase 3 like protein-coding chr20-25 chr20 41618368 41618612 + 46.7 0.000 promoter-TSS (NM_032221) promoter-TSS (NM_032221) -113 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding chr11-95 chr11 706466 706710 + 46.7 0.000 5' UTR (NM_001367390, exon 1 of 12) 5' UTR (NM_001367390, exon 1 of 12) 357 NM_022772 64787 Hs.55016 NM_022772 ENSG00000177106 EPS8L2 DFNB106|EPS8R2 EPS8 like 2 protein-coding chr7-137 chr7 44791653 44791897 + 46.7 0.000 Intergenic Intergenic -4906 NM_021130 5478 Hs.356331 NM_021130 ENSG00000196262 PPIA CYPA|CYPH|HEL-S-69p peptidylprolyl isomerase A protein-coding chr10-76 chr10 75359296 75359540 + 46.7 0.000 intron (NR_038225, intron 3 of 3) intron (NR_038225, intron 3 of 3) -42110 NR_024421 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr6-42 chr6 80106401 80106645 + 46.7 0.000 promoter-TSS (NM_183050) promoter-TSS (NM_183050) -87 NM_001318975 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr11-52 chr11 30323020 30323264 + 46.7 0.000 promoter-TSS (NM_152316) promoter-TSS (NM_152316) 38 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr7-118 chr7 74993972 74994216 + 46.7 0.000 intron (NM_001145064, intron 1 of 8) intron (NM_001145064, intron 1 of 8) 29389 NM_001145064 729438 Hs.594823 NM_001145064 ENSG00000274070 CASTOR2 GATSL1|GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 protein-coding chr1-390 chr1 146377024 146377268 + 46.6 0.000 TTS (NR_004400).6 TTS (NR_004400).6 339 NR_004421 6060 NR_004421 ENSG00000207389 RNU1-4 HSD2|HSD5|HSD6|HSD7|RNU1|RNU1D2|RNU1E2|RNU1F1|RNU1G1|RNU1G2|U1B2|U1D2|U1E2|U1F RNA, U1 small nuclear 4 snRNA chr19-214 chr19 13037191 13037435 + 46.6 0.000 intron (NM_001365984, intron 1 of 9) intron (NM_001365984, intron 1 of 9) 12534 NM_001365984 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr18-23 chr18 54776264 54776508 + 46.6 0.000 Intergenic LTR84b|LTR|ERVL -52091 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr3-147 chr3 45085292 45085536 + 46.6 0.000 3' UTR (NM_022842, exon 9 of 9) 3' UTR (NM_022842, exon 9 of 9) 55271 NM_001308394 7123 Hs.476092 NM_003278 ENSG00000163815 CLEC3B TN|TNA C-type lectin domain family 3 member B protein-coding chr14-64 chr14 22919283 22919527 + 46.4 0.000 promoter-TSS (NR_120599) promoter-TSS (NR_120599) -51 NR_120600 100505758 Hs.655707 NR_120599 ENSG00000237054 PRMT5-AS1 - PRMT5 antisense RNA 1 ncRNA chr2-90 chr2 102227785 102228029 + 46.4 0.000 intron (NM_001351447, intron 7 of 9) intron (NM_001351447, intron 7 of 9) 40593 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding chr7-160 chr7 23713922 23714166 + 46.4 0.000 intron (NM_031414, intron 3 of 23) Tigger3b|DNA|TcMar-Tigger 3825 NR_048542 56164 Hs.309767 NM_031414 ENSG00000196335 STK31 SGK396|TDRD8 serine/threonine kinase 31 protein-coding chr16-122 chr16 77722448 77722692 + 46.4 0.000 promoter-TSS (NM_001105663) promoter-TSS (NM_001105663) 56 NM_001105663 283927 Hs.282665 NM_001105663 ENSG00000140876 NUDT7 - nudix hydrolase 7 protein-coding chr10-46 chr10 68407228 68407472 + 46.4 0.000 promoter-TSS (NM_017987) promoter-TSS (NM_017987) -56 NM_001042417 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding chr11-163 chr11 6481413 6481657 + 46.4 0.000 promoter-TSS (NM_001370411) promoter-TSS (NM_001370411) 34 NM_012192 26515 Hs.54943 NM_012192 ENSG00000132286 TIMM10B FXC1|TIM10B|Tim9b translocase of inner mitochondrial membrane 10B protein-coding chr19-245 chr19 50658213 50658457 + 46.3 0.000 TTS (NM_016148) TTS (NM_016148) 8890 NM_001195076 342918 Hs.531650 NM_001195076 ENSG00000235034 C19orf81 - chromosome 19 open reading frame 81 protein-coding chr1-369 chr1 227563462 227563706 + 46.3 0.000 promoter-TSS (NM_001367910) promoter-TSS (NM_001367910) 28 NM_001367911 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding chr16-111 chr16 30585537 30585781 + 46.3 0.000 promoter-TSS (NM_152458) promoter-TSS (NM_152458) 38 NM_152458 146540 Hs.513509 NM_152458 ENSG00000197162 ZNF785 ZNF688 zinc finger protein 785 protein-coding chr8-115 chr8 74350424 74350668 + 46.3 0.000 exon (NM_001362931, exon 1 of 6) exon (NM_001362931, exon 1 of 6) 143 NM_018972 54332 Hs.168950 NM_018972 ENSG00000104381 GDAP1 CMT4|CMT4A|CMTRIA ganglioside induced differentiation associated protein 1 protein-coding chr20-23 chr20 32357981 32358225 + 46.3 0.000 promoter-TSS (NM_001363734) promoter-TSS (NM_001363734) -241 NM_015338 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr3-333 chr3 38165027 38165271 + 46.1 0.000 promoter-TSS (NM_005109) promoter-TSS (NM_005109) -388 NM_005109 9943 Hs.475970 NM_005109 ENSG00000172939 OXSR1 OSR1 oxidative stress responsive kinase 1 protein-coding chr9-192 chr9 35646613 35646857 + 46.1 0.000 non-coding (NR_135130, exon 2 of 2) non-coding (NR_135130, exon 2 of 2) 465 NR_135130 101926948 Hs.639412 NR_135130 LOC101926948 - uncharacterized LOC101926948 ncRNA chr17-131 chr17 75667157 75667401 + 46.1 0.000 promoter-TSS (NM_004259) promoter-TSS (NM_004259) -59 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr3-87 chr3 116005422 116005666 + 46.1 0.000 intron (NM_001318915, intron 3 of 8) intron (NM_001318915, intron 3 of 8) -100418 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA chr7-162 chr7 33129283 33129527 + 46.0 0.000 promoter-TSS (NM_001348037) promoter-TSS (NM_001348037) 120 NM_001348036 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding chr22-33 chr22 38218587 38218831 + 46.0 0.000 TTS (NM_012264) TTS (NM_012264) 6011 NR_132774 106635525 NR_132774 SNORA92 - small nucleolar RNA, H/ACA box 92 snoRNA chr6-35 chr6 161229256 161229500 + 46.0 0.000 intron (NM_020133, intron 2 of 8) intron (NM_020133, intron 2 of 8) 44683 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr5-62 chr5 97183231 97183475 + 46.0 0.000 promoter-TSS (NM_001159749) promoter-TSS (NM_001159749) -106 NM_018343 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding chr15-32 chr15 85794779 85795023 + 46.0 0.000 promoter-TSS (NM_022480) promoter-TSS (NM_022480) 24 NM_022480 64410 Hs.498371 NM_022480 ENSG00000183655 KLHL25 ENC-2|ENC2 kelch like family member 25 protein-coding chr12-65 chr12 2890659 2890903 + 46.0 0.000 promoter-TSS (NM_001160408) promoter-TSS (NM_001160408) -110 NM_003324 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr1-169 chr1 197201385 197201629 + 46.0 0.000 promoter-TSS (NM_001257965) promoter-TSS (NM_001257965) 3 NM_001257965 23418 Hs.126135 NM_012076 ENSG00000134376 CRB1 LCA8|RP12 crumbs cell polarity complex component 1 protein-coding chr1-75 chr1 164558821 164559065 + 46.0 0.000 promoter-TSS (NM_001353131) promoter-TSS (NM_001353131) -417 NM_001204961 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr10-103 chr10 6136477 6136721 + 46.0 0.000 Intergenic Intergenic -8322 NM_001145443 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr11-303 chr11 126992152 126992396 + 46.0 0.000 intron (NM_001301097, intron 1 of 15) L3|LINE|CR1 -3732 NR_036126 100422918 NR_036126 ENSG00000266215 MIR3167 - microRNA 3167 ncRNA chr3-105 chr3 57227377 57227621 + 46.0 0.000 promoter-TSS (NM_012096) promoter-TSS (NM_012096) -230 NM_012096 26060 Hs.476415 NM_012096 ENSG00000157500 APPL1 APPL|DIP13alpha|MODY14 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 protein-coding chr19-327 chr19 56314971 56315215 + 46.0 0.000 promoter-TSS (NM_001322064) promoter-TSS (NM_001322064) -254 NM_001322064 79149 Hs.177688 NM_024303 ENSG00000131848 ZSCAN5A ZNF495|ZSCAN5 zinc finger and SCAN domain containing 5A protein-coding chr15-71 chr15 64093781 64094025 + 46.0 0.000 promoter-TSS (NM_032231) promoter-TSS (NM_032231) -65 NM_032231 84191 Hs.439548 NM_032231 ENSG00000166797 CIAO2A CIA2A|FAM96A cytosolic iron-sulfur assembly component 2A protein-coding chr8-111 chr8 94018543 94018787 + 45.8 0.000 Intergenic Intergenic 101718 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr3-77 chr3 113696720 113696964 + 45.8 0.000 promoter-TSS (NR_111981) promoter-TSS (NR_111981) -196 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr10-75 chr10 71713273 71713517 + 45.8 0.000 3' UTR (NM_001168390, exon 2 of 2) 3' UTR (NM_001168390, exon 2 of 2) 6383 NM_001164375 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr2-160 chr2 125405863 125406107 + 45.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger 712000 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr13-25 chr13 102596589 102596833 + 45.8 0.000 promoter-TSS (NM_003291) promoter-TSS (NM_003291) -275 NM_001367947 7174 Hs.432424 NM_003291 ENSG00000134900 TPP2 TPP-2|TPP-II|TPPII tripeptidyl peptidase 2 protein-coding chr19-127 chr19 1040765 1041009 + 45.8 0.000 intron (NM_019112, intron 1 of 46) intron (NM_019112, intron 1 of 46) 784 NM_019112 10347 Hs.134514 NM_019112 ENSG00000064687 ABCA7 ABCA-SSN|ABCX|AD9 ATP binding cassette subfamily A member 7 protein-coding chr16-136 chr16 31064990 31065234 + 45.8 0.000 promoter-TSS (NM_001172669) promoter-TSS (NM_001172669) -24 NM_001172670 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr12-73 chr12 64404255 64404499 + 45.8 0.000 promoter-TSS (NM_007235) promoter-TSS (NM_007235) -15 NM_007235 11260 Hs.85951 NM_007235 ENSG00000184575 XPOT XPO3 exportin for tRNA protein-coding chr14-157 chr14 63893719 63893963 + 45.7 0.000 intron (NM_015180, intron 1 of 114) intron (NM_015180, intron 1 of 114) 40837 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr11-85 chr11 67401617 67401861 + 45.7 0.000 exon (NM_002708, exon 1 of 7) exon (NM_002708, exon 1 of 7) 119 NM_206873 5499 Hs.183994 NM_002708 ENSG00000172531 PPP1CA PP-1A|PP1A|PP1alpha|PPP1A protein phosphatase 1 catalytic subunit alpha protein-coding chr7-324 chr7 94632461 94632705 + 45.7 0.000 intron (NM_001346717, intron 1 of 9) intron (NM_001346717, intron 1 of 9) 23550 NM_001362809 8910 Hs.371199 NM_003919 ENSG00000127990 SGCE DYT11|ESG|epsilon-SG sarcoglycan epsilon protein-coding chr10-135 chr10 91409565 91409809 + 45.5 0.000 promoter-TSS (NR_104291) promoter-TSS (NR_104291) 452 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding chr17-166 chr17 7587500 7587744 + 45.5 0.000 TTS (NM_006942) TTS (NM_006942) 2472 NM_006942 6665 Hs.95582 NM_006942 ENSG00000129194 SOX15 SOX20|SOX26|SOX27 SRY-box transcription factor 15 protein-coding chr17-74 chr17 80454790 80455034 + 45.5 0.000 Intergenic CpG 21695 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr18-13 chr18 12407751 12407995 + 45.5 0.000 promoter-TSS (NM_006553) promoter-TSS (NM_006553) -56 NM_006553 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr5-175 chr5 62937693 62937937 + 45.5 0.000 Intergenic MLT1L|LTR|ERVL-MaLR 358996 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding chr17-244 chr17 28854941 28855185 + 45.5 0.000 promoter-TSS (NM_005702) promoter-TSS (NM_005702) 47 NM_005702 26284 Hs.3426 NM_005702 ENSG00000132591 ERAL1 CEGA|ERA|ERA-W|ERAL1A|ERAL1B|H-ERA|HERA-A|HERA-B|PRLTS6 Era like 12S mitochondrial rRNA chaperone 1 protein-coding chr14-47 chr14 63204075 63204319 + 45.5 0.000 promoter-TSS (NM_020663) promoter-TSS (NM_020663) -246 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding chr18-65 chr18 36309672 36309916 + 45.5 0.000 intron (NM_001281740, intron 1 of 28) intron (NM_001281740, intron 1 of 28) 12081 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr18-49 chr18 32921533 32921777 + 45.4 0.000 Intergenic MER44B|DNA|TcMar-Tigger -148632 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding chr11-218 chr11 65899604 65899848 + 45.4 0.000 intron (NM_005438, intron 1 of 3) CpG 662 NM_001300844 8061 Hs.283565 NM_005438 ENSG00000175592 FOSL1 FRA|FRA1|fra-1 FOS like 1, AP-1 transcription factor subunit protein-coding chr20-19 chr20 25696651 25696895 + 45.4 0.000 promoter-TSS (NM_015655) promoter-TSS (NM_015655) 80 NM_015655 26152 Hs.61881 NM_015655 ENSG00000130684 ZNF337 - zinc finger protein 337 protein-coding chr19-197 chr19 36054646 36054890 + 45.2 0.000 promoter-TSS (NM_173636) promoter-TSS (NM_173636) -6 NR_138539 199745 Hs.350209 NM_152658 ENSG00000161277 THAP8 - THAP domain containing 8 protein-coding chr2-157 chr2 32010770 32011014 + 45.2 0.000 promoter-TSS (NM_015955) promoter-TSS (NM_015955) 116 NM_001301833 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding chr22-50 chr22 38201929 38202173 + 45.2 0.000 promoter-TSS (NM_012323) promoter-TSS (NM_012323) 57 NM_012323 23764 Hs.517617 NM_012323 ENSG00000185022 MAFF U-MAF|hMafF MAF bZIP transcription factor F protein-coding chr11-145 chr11 31509661 31509905 + 45.2 0.000 promoter-TSS (NM_019040) promoter-TSS (NM_019040) 16 NM_019040 26610 Hs.175534 NM_019040 ENSG00000109911 ELP4 AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 elongator acetyltransferase complex subunit 4 protein-coding chr1-49 chr1 43707339 43707583 + 45.2 0.000 promoter-TSS (NM_001350621) promoter-TSS (NM_001350621) -36 NM_174965 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding chr18-18 chr18 27922029 27922273 + 45.1 0.000 Intergenic Intergenic 114490 NM_001308176 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr12-38 chr12 121399760 121400004 + 45.1 0.000 promoter-TSS (NM_001256858) promoter-TSS (NM_001256858) -201 NM_001256858 80196 Hs.292804 NM_025126 ENSG00000170633 RNF34 CARP-1|CARP1|RFI|RIF|RIFF|hRFI ring finger protein 34 protein-coding chr1-277 chr1 162696447 162696691 + 45.1 0.000 intron (NM_006182, intron 2 of 17) intron (NM_006182, intron 2 of 17) 64105 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr3-238 chr3 155979771 155980015 + 45.1 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 109243 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr15-78 chr15 85668039 85668283 + 45.1 0.000 intron (NM_007200, intron 13 of 36) intron (NM_007200, intron 13 of 36) 48211 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr19-182 chr19 1021188 1021432 + 45.1 0.000 promoter-TSS (NM_033420) promoter-TSS (NM_033420) -187 NM_033420 91304 Hs.515003 NM_033420 ENSG00000182087 TMEM259 ASBABP1|C19orf6|MBRL|MEMBRALIN|R32184_3 transmembrane protein 259 protein-coding chr9-166 chr9 137188745 137188989 + 45.1 0.000 promoter-TSS (NM_013366) promoter-TSS (NM_013366) 191 NM_003731 8636 Hs.530314 NM_003731 ENSG00000176101 SSNA1 N14|NA-14|NA14 SS nuclear autoantigen 1 protein-coding chr7-106 chr7 132065770 132066014 + 44.9 0.000 Intergenic Intergenic 155672 NR_110836 101928782 Hs.571369 NR_110836 ENSG00000224865 LOC101928782 - uncharacterized LOC101928782 ncRNA chr19-208 chr19 49208259 49208503 + 44.9 0.000 intron (NM_001321281, intron 18 of 22) LTR13|LTR|ERVK 50589 NM_001321282 54795 Hs.467101 NM_017636 ENSG00000130529 TRPM4 LTrpC4|PFHB1B|TRPM4B|hTRPM4 transient receptor potential cation channel subfamily M member 4 protein-coding chr16-147 chr16 85306353 85306597 + 44.9 0.000 promoter-TSS (NR_049816) promoter-TSS (NR_049816) -150 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr12-127 chr12 66036335 66036579 + 44.9 0.000 Intergenic Intergenic -5391 NR_146530 105369810 NR_146530 ENSG00000256259 LINC02425 - long intergenic non-protein coding RNA 2425 ncRNA chr8-58 chr8 25248303 25248547 + 44.9 0.000 intron (NM_024940, intron 2 of 51) intron (NM_024940, intron 2 of 51) 63736 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr1-101 chr1 1908961 1909205 + 44.9 0.000 Intergenic CpG -6177 NM_001330313 163688 Hs.85902 NM_138705 ENSG00000169885 CALML6 CAGLP calmodulin like 6 protein-coding chr9-16 chr9 135907684 135907928 + 44.9 0.000 promoter-TSS (NM_015447) promoter-TSS (NM_015447) -260 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr5-166 chr5 127371504 127371748 + 44.8 0.000 intron (NM_001308121, intron 5 of 13) intron (NM_001308121, intron 5 of 13) 80830 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr6-86 chr6 158648745 158648989 + 44.8 0.000 Intergenic Intergenic -1147 NM_001242395 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr7-62 chr7 12211085 12211329 + 44.8 0.000 promoter-TSS (NM_018374) promoter-TSS (NM_018374) -87 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr19-326 chr19 55087127 55087371 + 44.8 0.000 intron (NM_017729, intron 13 of 14) CpG-15149 6857 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr7-211 chr7 103074651 103074895 + 44.8 0.000 promoter-TSS (NM_001161011) promoter-TSS (NM_001161011) 23 NM_001111038 222235 Hs.660029 NM_145032 ENSG00000161040 FBXL13 DRC6|Fbl13 F-box and leucine rich repeat protein 13 protein-coding chr17-62 chr17 78879687 78879931 + 44.8 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 23392 NM_001243541 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr17-115 chr17 51153367 51153611 + 44.8 0.000 promoter-TSS (NM_000269) promoter-TSS (NM_000269) -47 NR_037149 654364 Hs.463456 NM_001018136 ENSG00000011052 NME1-NME2 NM23-LV|NMELV NME1-NME2 readthrough protein-coding chr4-89 chr4 37826637 37826881 + 44.8 0.000 promoter-TSS (NM_018290) promoter-TSS (NM_018290) 73 NM_018290 55276 Hs.23363 NM_018290 ENSG00000169299 PGM2 MSTP006 phosphoglucomutase 2 protein-coding chr3-28 chr3 100709371 100709615 + 44.8 0.000 promoter-TSS (NM_006070) promoter-TSS (NM_006070) -1 NM_006070 10342 Hs.518123 NM_006070 ENSG00000114354 TFG HMSNP|SPG57|TF6|TRKT3 trafficking from ER to golgi regulator protein-coding chrX-44 chrX 11759349 11759593 + 44.8 0.000 promoter-TSS (NM_006800) promoter-TSS (NM_006800) -176 NM_006800 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding chr7-88 chr7 101100290 101100534 + 44.8 0.000 Intergenic Intergenic 14931 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr18-25 chr18 24076334 24076578 + 44.6 0.000 intron (NM_001135993, intron 4 of 13) intron (NM_001135993, intron 4 of 13) -36871 NM_001292030 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr5-52 chr5 58582897 58583141 + 44.6 0.000 promoter-TSS (NM_138453) promoter-TSS (NM_138453) -56 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr6-89 chr6 85660274 85660518 + 44.6 0.000 Intergenic Intergenic 16972 NR_002743 26799 NR_002743 SNORD50A RNU50|U50 small nucleolar RNA, C/D box 50A snoRNA chr2-129 chr2 72561936 72562180 + 44.6 0.000 intron (NR_135774, intron 7 of 19) intron (NR_135774, intron 7 of 19) 263975 NM_001321730 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding chr21-18 chr21 42879393 42879637 + 44.6 0.000 promoter-TSS (NM_001260477) promoter-TSS (NM_001260477) 24 NM_018669 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr7-138 chr7 55325482 55325726 + 44.6 0.000 Intergenic Intergenic -39844 NM_018697 55915 Hs.595384 NM_018697 ENSG00000132434 LANCL2 GPR69B|TASP LanC like 2 protein-coding chr1-154 chr1 117121647 117121891 + 44.6 0.000 promoter-TSS (NM_025188) promoter-TSS (NM_025188) -20 NM_025188 80263 Hs.301526 NM_025188 ENSG00000134253 TRIM45 RNF99 tripartite motif containing 45 protein-coding chr18-15 chr18 9334701 9334945 + 44.6 0.000 promoter-TSS (NM_020648) promoter-TSS (NM_020648) 50 NM_020648 57045 Hs.514685 NM_020648 ENSG00000128791 TWSG1 TSG twisted gastrulation BMP signaling modulator 1 protein-coding chr8-38 chr8 140577805 140578049 + 44.5 0.000 intron (NM_001164623, intron 2 of 17) intron (NM_001164623, intron 2 of 17) 57706 NM_012154 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr17-46 chr17 76737334 76737578 + 44.5 0.000 promoter-TSS (NM_001353018) promoter-TSS (NM_001353018) -45 NM_003016 6427 Hs.584801 NM_003016 ENSG00000161547 SRSF2 PR264|SC-35|SC35|SFRS2|SFRS2A|SRp30b serine and arginine rich splicing factor 2 protein-coding chr6-102 chr6 26474091 26474335 + 44.5 0.000 intron (NR_038992, intron 3 of 3) MER57C2|LTR|ERV1 8296 NR_038992 285819 Hs.575357 NR_038992 LOC285819 - uncharacterized LOC285819 ncRNA chr1-71 chr1 172532772 172533016 + 44.5 0.000 promoter-TSS (NM_001282751) promoter-TSS (NM_001282751) -224 NM_001282751 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding chr2-197 chr2 222959388 222959632 + 44.5 0.000 Intergenic LTR16A2|LTR|ERVL -92420 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr16-108 chr16 53588 53832 + 44.5 0.000 promoter-TSS (NM_016310) promoter-TSS (NM_016310) -102 NM_016310 51728 Hs.632223 NM_016310 ENSG00000161980 POLR3K C11|C11-RNP3|My010|RPC10|RPC11|RPC12.5 RNA polymerase III subunit K protein-coding chr2-63 chr2 134918295 134918539 + 44.5 0.000 promoter-TSS (NM_058241) promoter-TSS (NM_058241) 189 NR_036549 100129961 Hs.729028 NR_036549 CCNT2-AS1 - CCNT2 antisense RNA 1 ncRNA chr10-181 chr10 91923725 91923969 + 44.5 0.000 promoter-TSS (NM_003972) promoter-TSS (NM_003972) 77 NM_003972 9044 Hs.500526 NM_003972 ENSG00000095564 BTAF1 MOT1|TAF(II)170|TAF172|TAFII170 B-TFIID TATA-box binding protein associated factor 1 protein-coding chr11-208 chr11 72793664 72793908 + 44.5 0.000 promoter-TSS (NM_006645) promoter-TSS (NM_006645) -81 NM_006645 10809 Hs.188606 NM_006645 ENSG00000214530 STARD10 CGI-52|NY-CO-28|PCTP2|SDCCAG28 StAR related lipid transfer domain containing 10 protein-coding chr11-233 chr11 34988490 34988734 + 44.5 0.000 intron (NM_003477, intron 9 of 10) intron (NM_003477, intron 9 of 10) 46775 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr9-68 chr9 2843974 2844218 + 44.5 0.000 promoter-TSS (NM_014878) promoter-TSS (NM_014878) -1 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chrX-7 chrX 149539491 149539735 + 44.5 0.000 promoter-TSS (NM_001324274) promoter-TSS (NM_001324274) 139 NR_027455 100131434 Hs.669775 NM_001039766 ENSG00000241769 LINC00893 - long intergenic non-protein coding RNA 893 ncRNA chr16-78 chr16 90077330 90077574 + 44.3 0.000 Intergenic CpG -1522 NM_001098173 11105 Hs.406695 NM_052996 ENSG00000126856 PRDM7 PFM4|ZNF910 PR/SET domain 7 protein-coding chr13-19 chr13 51584148 51584392 + 44.3 0.000 promoter-TSS (NM_052950) promoter-TSS (NM_052950) -192 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr12-66 chr12 57520404 57520648 + 44.3 0.000 promoter-TSS (NM_001195054) promoter-TSS (NM_001195054) -9 NM_001195054 1649 Hs.505777 NM_004083 ENSG00000175197 DDIT3 AltDDIT3|C/EBPzeta|CEBPZ|CHOP|CHOP-10|CHOP10|GADD153 DNA damage inducible transcript 3 protein-coding chr14-39 chr14 64540370 64540614 + 44.3 0.000 promoter-TSS (NR_110550) promoter-TSS (NR_110550) 24 NM_021979 3306 Hs.432648 NM_021979 ENSG00000126803 HSPA2 HSP70-2|HSP70-3 heat shock protein family A (Hsp70) member 2 protein-coding chr6-23 chr6 159790227 159790471 + 44.3 0.000 promoter-TSS (NM_014161) promoter-TSS (NM_014161) -97 NM_001318817 29074 Hs.416998 NM_014161 ENSG00000112110 MRPL18 HSPC071|L18mt|MRP-L18 mitochondrial ribosomal protein L18 protein-coding chr17-178 chr17 82213346 82213590 + 44.3 0.000 promoter-TSS (NM_001316321) promoter-TSS (NM_001316321) -626 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr1-122 chr1 200409922 200410166 + 44.2 0.000 promoter-TSS (NM_001281294) promoter-TSS (NM_001281294) -8 NM_001281294 23528 Hs.59757 NM_012482 ENSG00000162702 ZNF281 ZBP-99|ZNP-99 zinc finger protein 281 protein-coding chr12-18 chr12 4321008 4321252 + 44.2 0.000 promoter-TSS (NM_020375) promoter-TSS (NM_020375) -83 NM_020375 57103 Hs.504545 NM_020375 ENSG00000078237 TIGAR C12orf5|FR2BP TP53 induced glycolysis regulatory phosphatase protein-coding chr1-144 chr1 16904870 16905114 + 44.2 0.000 Intergenic CpG 9012 NR_004421 6060 NR_004421 ENSG00000207389 RNU1-4 HSD2|HSD5|HSD6|HSD7|RNU1|RNU1D2|RNU1E2|RNU1F1|RNU1G1|RNU1G2|U1B2|U1D2|U1E2|U1F RNA, U1 small nuclear 4 snRNA chr5-63 chr5 137754407 137754651 + 44.2 0.000 promoter-TSS (NM_006805) promoter-TSS (NM_006805) -166 NM_006805 10949 Hs.96996 NM_006805 ENSG00000177733 HNRNPA0 HNRPA0 heterogeneous nuclear ribonucleoprotein A0 protein-coding chr19-206 chr19 43935008 43935252 + 44.0 0.000 5' UTR (NM_003425, exon 1 of 10) 5' UTR (NM_003425, exon 1 of 10) 152 NM_003425 7596 Hs.381285 NM_003425 ENSG00000124459 ZNF45 KOX5|ZNF13 zinc finger protein 45 protein-coding chr7-76 chr7 100429190 100429434 + 44.0 0.000 promoter-TSS (NM_017984) promoter-TSS (NM_017984) -135 NM_001363486 56257 Hs.178011 NM_019606 ENSG00000146834 MEPCE BCDIN3 methylphosphate capping enzyme protein-coding chr4-100 chr4 16270135 16270379 + 44.0 0.000 Intergenic MIR|SINE|MIR 43594 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr22-90 chr22 41308031 41308275 + 44.0 0.000 intron (NM_017590, intron 1 of 22) intron (NM_017590, intron 1 of 22) -5784 NM_001317930 5905 Hs.183800 NM_002883 ENSG00000100401 RANGAP1 Fug1|RANGAP|SD Ran GTPase activating protein 1 protein-coding chr7-184 chr7 140696644 140696888 + 43.8 0.000 promoter-TSS (NM_004546) promoter-TSS (NM_004546) 58 NM_004546 4708 Hs.655788 NM_004546 ENSG00000090266 NDUFB2 AGGG|CI-AGGG NADH:ubiquinone oxidoreductase subunit B2 protein-coding chr2-35 chr2 10812648 10812892 + 43.8 0.000 promoter-TSS (NM_005742) promoter-TSS (NM_005742) 15 NM_005742 10130 Hs.212102 NM_005742 ENSG00000143870 PDIA6 ERP5|P5|TXNDC7 protein disulfide isomerase family A member 6 protein-coding chr12-186 chr12 127810155 127810399 + 43.8 0.000 Intergenic Intergenic -71340 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA chr19-185 chr19 17337239 17337483 + 43.8 0.000 promoter-TSS (NM_032620) promoter-TSS (NM_032620) -192 NM_133644 84705 Hs.334885 NM_032620 ENSG00000130299 GTPBP3 COXPD23|GTPBG3|MSS1|MTGP1|THDF1 GTP binding protein 3, mitochondrial protein-coding chr18-8 chr18 12991236 12991480 + 43.8 0.000 promoter-TSS (NM_032142) promoter-TSS (NM_032142) -4 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding chr15-76 chr15 63089339 63089583 + 43.8 0.000 Intergenic Intergenic -32400 NM_001288585 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr1-178 chr1 91022065 91022309 + 43.8 0.000 promoter-TSS (NM_016620) promoter-TSS (NM_016620) 68 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr1-451 chr1 223701084 223701328 + 43.8 0.000 promoter-TSS (NM_001146068) promoter-TSS (NM_001146068) -387 NM_001146068 824 Hs.350899 NM_001748 ENSG00000162909 CAPN2 CANP2|CANPL2|CANPml|mCANP calpain 2 protein-coding chr14-46 chr14 105088134 105088378 + 43.8 0.000 Intergenic CpG -5891 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr13-82 chr13 46354938 46355182 + 43.8 0.000 intron (NM_025113, intron 10 of 14) intron (NM_025113, intron 10 of 14) 32192 NM_001286763 80183 Hs.98117 NM_025113 ENSG00000102445 RUBCNL C13orf18|KIAA0226L|PACER rubicon like autophagy enhancer protein-coding chr11-241 chr11 65849769 65850013 + 43.8 0.000 intron (NM_152760, intron 2 of 12) intron (NM_152760, intron 2 of 12) 8289 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding chr7-143 chr7 130921452 130921696 + 43.8 0.000 non-coding (NR_109780, exon 4 of 4) non-coding (NR_109780, exon 4 of 4) 8110 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr7-225 chr7 44986662 44986906 + 43.7 0.000 promoter-TSS (NR_152597) promoter-TSS (NR_152597) -88 NR_152597 285958 Hs.25892 NR_003697 ENSG00000232956 SNHG15 C7orf40|Linc-Myo1g|MYO1GUT small nucleolar RNA host gene 15 ncRNA chr3-50 chr3 66500983 66501227 + 43.7 0.000 promoter-TSS (NM_015541).2 promoter-TSS (NM_015541).2 -684 NM_015541 26018 Hs.518055 NM_015541 ENSG00000144749 LRIG1 LIG-1|LIG1 leucine rich repeats and immunoglobulin like domains 1 protein-coding chr1-136 chr1 100249845 100250089 + 43.7 0.000 promoter-TSS (NM_001918) promoter-TSS (NM_001918) -133 NM_001918 1629 Hs.709187 NM_001918 ENSG00000137992 DBT BCATE2|BCKAD-E2|BCKADE2|BCOADC-E2|E2|E2B dihydrolipoamide branched chain transacylase E2 protein-coding chr17-142 chr17 15699481 15699725 + 43.7 0.000 promoter-TSS (NM_001130842) promoter-TSS (NM_001130842) -149 NM_020652 57335 Hs.585799 NM_020652 ENSG00000187607 ZNF286A ZNF286 zinc finger protein 286A protein-coding chr16-89 chr16 30650592 30650836 + 43.7 0.000 promoter-TSS (NM_001320464) promoter-TSS (NM_001320464) -64 NM_001320464 78994 Hs.293629 NM_024031 ENSG00000156858 PRR14 - proline rich 14 protein-coding chr4-105 chr4 56436175 56436419 + 43.7 0.000 promoter-TSS (NM_001079524) promoter-TSS (NM_001079524) 37 NM_001079525 10606 Hs.518774 NM_006452 ENSG00000128050 PAICS ADE2|ADE2H1|AIRC|PAIS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase protein-coding chr14-17 chr14 105086907 105087151 + 43.7 0.000 Intergenic CpG -7118 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr16-99 chr16 87317208 87317452 + 43.5 0.000 promoter-TSS (NM_001195124) promoter-TSS (NM_001195124) 62 NM_001195125 100506581 Hs.729380 NM_001195124 ENSG00000260456 C16orf95 - chromosome 16 open reading frame 95 protein-coding chr4-54 chr4 99060338 99060582 + 43.5 0.000 intron (NM_015143, intron 10 of 10) AluY|SINE|Alu 28328 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr1-225 chr1 21703724 21703968 + 43.5 0.000 intron (NM_001350167, intron 20 of 26) AluJr4|SINE|Alu -34489 NM_001350526 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr17-93 chr17 3667970 3668214 + 43.5 0.000 promoter-TSS (NM_001014764) promoter-TSS (NM_001014764) 486 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding chr14-31 chr14 61762222 61762466 + 43.4 0.000 promoter-TSS (NM_003082) promoter-TSS (NM_003082) -76 NM_003082 6617 Hs.179312 NM_003082 ENSG00000023608 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex polypeptide 1 protein-coding chr7-153 chr7 2757844 2758088 + 43.4 0.000 intron (NM_007353, intron 2 of 3) intron (NM_007353, intron 2 of 3) 5174 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr22-107 chr22 37199241 37199485 + 43.4 0.000 promoter-TSS (NM_001365878) promoter-TSS (NM_001365878) 60 NM_001365878 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr12-204 chr12 26299187 26299431 + 43.4 0.000 Intergenic Intergenic 103736 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr20-16 chr20 35541877 35542121 + 43.2 0.000 promoter-TSS (NM_015966) promoter-TSS (NM_015966) -79 NM_198398 51614 Hs.472558 NM_015966 ENSG00000125991 ERGIC3 C20orf47|C2orf47|CGI-54|Erv46|NY-BR-84|PRO0989|SDBCAG84|dJ477O4.2 ERGIC and golgi 3 protein-coding chr7-53 chr7 112206394 112206638 + 43.2 0.000 promoter-TSS (NM_021994) promoter-TSS (NM_021994) -117 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr15-196 chr15 25372529 25372773 + 43.2 0.000 intron (NM_001354542, intron 4 of 11) MLT1J2|LTR|ERVL-MaLR 65578 NM_001354505 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr9-37 chr9 134641496 134641740 + 43.2 0.000 promoter-TSS (NM_000093) promoter-TSS (NM_000093) -187 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr5-102 chr5 33649863 33650107 + 43.2 0.000 intron (NM_001324512, intron 7 of 21) intron (NM_001324512, intron 7 of 21) 209209 NM_001258438 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr10-189 chr10 109430214 109430458 + 43.2 0.000 Intergenic Intergenic 492910 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding chr6-67 chr6 37819126 37819370 + 43.2 0.000 promoter-TSS (NM_021943) promoter-TSS (NM_021943) -479 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr6-48 chr6 11093693 11093937 + 43.2 0.000 promoter-TSS (NM_001135575) promoter-TSS (NM_001135575) -19 NM_001135575 221710 Hs.656600 NM_001135575 ENSG00000224531 SMIM13 C6orf228 small integral membrane protein 13 protein-coding chr11-158 chr11 18526894 18527138 + 43.2 0.000 promoter-TSS (NM_006292) promoter-TSS (NM_006292) -74 NM_006292 7251 Hs.523512 NM_006292 ENSG00000074319 TSG101 TSG10|VPS23 tumor susceptibility 101 protein-coding chr7-113 chr7 101122013 101122257 + 43.2 0.000 Intergenic Intergenic -4954 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr19-140 chr19 49877719 49877963 + 43.1 0.000 promoter-TSS (NM_032375) promoter-TSS (NM_032375) 139 NM_024682 79735 Hs.631587 NM_024682 ENSG00000104946 TBC1D17 - TBC1 domain family member 17 protein-coding chr7-293 chr7 64307222 64307466 + 43.1 0.000 Intergenic Intergenic -6529 NM_001294255 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chrX-18 chrX 52995548 52995792 + 43.1 0.000 promoter-TSS (NM_001242489) promoter-TSS (NM_001242489) -198 NM_001242497 29057 Hs.6451 NM_014138 ENSG00000268350 FAM156A PRO0659|TMEM29 family with sequence similarity 156 member A protein-coding chr6-70 chr6 128882970 128883214 + 43.1 0.000 promoter-TSS (NM_001079823) promoter-TSS (NM_001079823) -46 NM_001079823 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr11-135 chr11 61962414 61962658 + 42.9 0.000 exon (NM_004183, exon 10 of 11) exon (NM_004183, exon 10 of 11) 5098 NM_002032 2495 Hs.524910 NM_002032 ENSG00000167996 FTH1 FHC|FTH|FTHL6|HFE5|PIG15|PLIF ferritin heavy chain 1 protein-coding chr18-12 chr18 36829000 36829244 + 42.9 0.000 promoter-TSS (NR_148565) promoter-TSS (NR_148565) -5 NR_136303 57536 Hs.4045 NM_020776 ENSG00000150477 KIAA1328 - KIAA1328 protein-coding chr18-34 chr18 26090908 26091152 + 42.9 0.000 promoter-TSS (NM_005637) promoter-TSS (NM_005637) 187 NM_001308201 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chr7-58 chr7 87345397 87345641 + 42.9 0.000 promoter-TSS (NR_015381) promoter-TSS (NR_015381) -27 NR_015381 11257 Hs.274329 NM_007233 ENSG00000182165 TP53TG1 LINC00096|NCRNA00096|P53TG1|P53TG1-D|TP53AP1 TP53 target 1 ncRNA chr13-91 chr13 44905016 44905260 + 42.9 0.000 Intergenic Intergenic 84333 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr9-125 chr9 113485444 113485688 + 42.8 0.000 intron (NM_001282923, intron 4 of 22) intron (NM_001282923, intron 4 of 22) -15861 NM_001276261 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr12-188 chr12 1443712 1443956 + 42.8 0.000 intron (NR_027948, intron 18 of 19) intron (NR_027948, intron 18 of 19) -56657 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr6-136 chr6 15969206 15969450 + 42.8 0.000 Intergenic Intergenic -159758 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr17-68 chr17 16535707 16535951 + 42.8 0.000 Intergenic CpG 33375 NM_020653 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding chr11-352 chr11 20112410 20112654 + 42.8 0.000 intron (NM_182964, intron 36 of 37) intron (NM_182964, intron 36 of 37) 47943 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr2-228 chr2 144836607 144836851 + 42.8 0.000 intron (NR_033870, intron 2 of 4) intron (NR_033870, intron 2 of 4) 168762 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr17-98 chr17 7833855 7834099 + 42.8 0.000 TTS (NM_020877) TTS (NM_020877) -5929 NM_001348716 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr4-47 chr4 24795453 24795697 + 42.6 0.000 promoter-TSS (NM_003102) promoter-TSS (NM_003102) 2 NM_003102 6649 Hs.2420 NM_003102 ENSG00000109610 SOD3 EC-SOD superoxide dismutase 3 protein-coding chr13-74 chr13 30119535 30119779 + 42.6 0.000 Intergenic Intergenic -10782 NR_046998 100874146 Hs.574116 NR_046998 ENSG00000224511 LINC00365 - long intergenic non-protein coding RNA 365 ncRNA chr9-105 chr9 134403886 134404130 + 42.6 0.000 intron (NM_002957, intron 2 of 9) intron (NM_002957, intron 2 of 9) -2552 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr6-19 chr6 85643127 85643371 + 42.6 0.000 promoter-TSS (NM_001159673) promoter-TSS (NM_001159673) -327 NM_001159673 10492 Hs.571177 NM_006372 ENSG00000135316 SYNCRIP GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q synaptotagmin binding cytoplasmic RNA interacting protein protein-coding chr19-367 chr19 13621480 13621724 + 42.6 0.000 Intergenic MIR|SINE|MIR -110150 NM_001320561 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr3-80 chr3 46979504 46979748 + 42.6 0.000 promoter-TSS (NM_015175) promoter-TSS (NM_015175) -57 NM_015175 23218 Hs.437043 NM_015175 ENSG00000160796 NBEAL2 BDPLT4|GPS neurobeachin like 2 protein-coding chr4-65 chr4 185396342 185396586 + 42.6 0.000 promoter-TSS (NM_181726) promoter-TSS (NM_181726) -377 NM_181726 353322 Hs.508154 NM_181726 ENSG00000186352 ANKRD37 Lrp2bp ankyrin repeat domain 37 protein-coding chr11-160 chr11 62706127 62706371 + 42.6 0.000 promoter-TSS (NM_032667) promoter-TSS (NM_032667) 66 NM_001130702 26580 Hs.533709 NM_032667 ENSG00000168000 BSCL2 GNG3LG|HMN5|PELD|SPG17 BSCL2 lipid droplet biogenesis associated, seipin protein-coding chr19-190 chr19 47047953 47048197 + 42.6 0.000 intron (NM_017854, intron 1 of 2) intron (NM_017854, intron 1 of 2) 549 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chrX-26 chrX 72181287 72181531 + 42.5 0.000 promoter-TSS (NM_001170747) promoter-TSS (NM_001170747) -267 NM_001170747 5303 Hs.655623 NM_006223 ENSG00000102309 PIN4 EPVH|PAR14|PAR17 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 protein-coding chr6-33 chr6 87589887 87590131 + 42.5 0.000 promoter-TSS (NM_001350505) promoter-TSS (NM_001350505) -22 NM_020320 57038 Hs.485910 NM_020320 ENSG00000146282 RARS2 ArgRS|DALRD2|PCH6|PRO1992|RARSL arginyl-tRNA synthetase 2, mitochondrial protein-coding chr5-118 chr5 157385002 157385246 + 42.5 0.000 intron (NM_001037333, intron 28 of 30) intron (NM_001037333, intron 28 of 30) -39447 NM_001001343 408263 Hs.437066 NM_001001343 ENSG00000172568 FNDC9 C5orf40 fibronectin type III domain containing 9 protein-coding chr3-180 chr3 196287638 196287882 + 42.5 0.000 promoter-TSS (NM_001312673) promoter-TSS (NM_001312673) -34 NM_005017 5130 Hs.135997 NM_005017 ENSG00000161217 PCYT1A CCTA|CT|CTA|CTPCT|PCYT1|SMDCRD phosphate cytidylyltransferase 1, choline, alpha protein-coding chr9-95 chr9 137277561 137277805 + 42.5 0.000 promoter-TSS (NM_017723) promoter-TSS (NM_017723) -43 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr3-149 chr3 49007198 49007442 + 42.5 0.000 promoter-TSS (NM_018031) promoter-TSS (NM_018031) -71 NM_001320546 11180 Hs.654815 NM_018031 ENSG00000178252 WDR6 - WD repeat domain 6 protein-coding chr7-96 chr7 94657859 94658103 + 42.5 0.000 intron (NM_001172437, intron 1 of 1) intron (NM_001172437, intron 1 of 1) 1611 NM_001040152 23089 Hs.147492 NM_015068 ENSG00000242265 PEG10 EDR|HB-1|MEF3L|Mar2|Mart2|RGAG3|RTL2|SIRH1 paternally expressed 10 protein-coding chr2-225 chr2 118738630 118738874 + 42.5 0.000 Intergenic Intergenic 109431 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding chr5-160 chr5 40835213 40835457 + 42.5 0.000 promoter-TSS (NM_000997) promoter-TSS (NM_000997) -113 NM_000997 6167 Hs.80545 NM_000997 ENSG00000145592 RPL37 L37 ribosomal protein L37 protein-coding chr1-179 chr1 95072575 95072819 + 42.3 0.000 intron (NM_144988, intron 1 of 3) CpG 254 NR_131032 199857 Hs.408927 NM_144988 ENSG00000172339 ALG14 CMS15 ALG14 UDP-N-acetylglucosaminyltransferase subunit protein-coding chr19-342 chr19 1507787 1508031 + 42.3 0.000 intron (NM_001367197, intron 8 of 12) intron (NM_001367197, intron 8 of 12) 5110 NM_213604 339366 Hs.371674 NM_213604 ENSG00000185761 ADAMTSL5 THSD6 ADAMTS like 5 protein-coding chr12-97 chr12 68686736 68686980 + 42.3 0.000 promoter-TSS (NR_038930) promoter-TSS (NR_038930) 1 NR_038930 100507250 Hs.600731 NR_038930 ENSG00000247363 LOC100507250 - uncharacterized LOC100507250 ncRNA chr11-151 chr11 64166079 64166323 + 42.3 0.000 promoter-TSS (NM_014067) promoter-TSS (NM_014067) -88 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr2-179 chr2 201781020 201781264 + 42.3 0.000 promoter-TSS (NM_001135745) promoter-TSS (NM_001135745) -209 NM_020919 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr7-48 chr7 6081392 6081636 + 42.3 0.000 Intergenic CpG -22285 NM_001134335 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding chr22-19 chr22 50474963 50475207 + 42.3 0.000 promoter-TSS (NM_002972) promoter-TSS (NM_002972) -50 NM_002972 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr1-206 chr1 150552315 150552559 + 42.2 0.000 TTS (NR_036211) TTS (NR_036211) 508 NR_036211 100422997 NR_036211 ENSG00000264553 MIR4257 - microRNA 4257 ncRNA chr12-100 chr12 120291498 120291742 + 42.2 0.000 TTS (NR_003137) TTS (NR_003137) 283 NR_003137 26834 NR_003137 ENSG00000202538 RNU4-2 RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c RNA, U4 small nuclear 2 snRNA chr1-202 chr1 37859679 37859923 + 42.2 0.000 promoter-TSS (NM_005955) promoter-TSS (NM_005955) -209 NM_005955 4520 Hs.471991 NM_005955 ENSG00000188786 MTF1 MTF-1|ZRF metal regulatory transcription factor 1 protein-coding chr1-52 chr1 2194830 2195074 + 42.2 0.000 promoter-TSS (NM_001256945) promoter-TSS (NM_001256945) -177 NM_001256947 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr5-263 chr5 55869032 55869276 + 42.2 0.000 intron (NM_001242636, intron 3 of 14) intron (NM_001242636, intron 3 of 14) 15832 NM_001242639 133396 Hs.55378 NM_139017 ENSG00000164509 IL31RA CRL|CRL3|GLM-R|GLMR|GPL|IL-31RA|PLCA2|PRO21384|hGLM-R interleukin 31 receptor A protein-coding chr19-155 chr19 58558736 58558980 + 42.2 0.000 promoter-TSS (NR_027334) promoter-TSS (NR_027334) -247 NM_003969 9040 Hs.406068 NM_003969 ENSG00000130725 UBE2M UBC-RS2|UBC12|hUbc12 ubiquitin conjugating enzyme E2 M protein-coding chr12-137 chr12 8949739 8949983 + 42.2 0.000 promoter-TSS (NM_001207024) promoter-TSS (NM_001207024) -100 NM_001207024 4074 Hs.134084 NM_002355 ENSG00000003056 M6PR CD-M6PR|CD-MPR|MPR 46|MPR-46|MPR46|SMPR mannose-6-phosphate receptor, cation dependent protein-coding chr6-104 chr6 38131630 38131874 + 42.2 0.000 intron (NM_021943, intron 5 of 5) intron (NM_021943, intron 5 of 5) 312025 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding chr7-81 chr7 135211616 135211860 + 42.2 0.000 promoter-TSS (NM_001362736) promoter-TSS (NM_001362736) -212 NM_001362738 29062 Hs.459858 NM_014149 ENSG00000105875 WDR91 HSPC049|SORF-1|SORF1 WD repeat domain 91 protein-coding chr11-129 chr11 72813950 72814194 + 42.2 0.000 promoter-TSS (NM_033388) promoter-TSS (NM_033388) -339 NM_001318766 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr3-173 chr3 150469773 150470017 + 42.0 0.000 Intergenic Intergenic 61597 NR_130136 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr16-157 chr16 71484325 71484569 + 42.0 0.000 intron (NM_006961, intron 2 of 5) intron (NM_006961, intron 2 of 5) 4877 NM_006961 7567 Hs.660076 NM_006961 ENSG00000157429 ZNF19 KOX12 zinc finger protein 19 protein-coding chr3-174 chr3 151037857 151038101 + 42.0 0.000 intron (NR_024066, intron 1 of 5) intron (NR_024066, intron 1 of 5) -48819 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr4-62 chr4 151760976 151761220 + 42.0 0.000 promoter-TSS (NM_004564) promoter-TSS (NM_004564) -75 NM_001363341 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr6-207 chr6 52517629 52517873 + 42.0 0.000 intron (NM_012288, intron 2 of 10) MamSINE1|SINE|tRNA-RTE 59309 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr9-202 chr9 131608599 131608843 + 42.0 0.000 intron (NM_198679, intron 11 of 23) intron (NM_198679, intron 11 of 23) 63198 NM_001365666 642515 NM_001365666 ENSG00000283526 PRRT1B DSPD2|IFITMD8 proline rich transmembrane protein 1B protein-coding chr1-521 chr1 235624677 235624921 + 42.0 0.000 intron (NM_001098721, intron 1 of 3) intron (NM_001098721, intron 1 of 3) 24985 NM_001098722 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding chr22-82 chr22 38284074 38284318 + 42.0 0.000 Intergenic Intergenic -11186 NM_012264 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr2-60 chr2 218568153 218568397 + 42.0 0.000 promoter-TSS (NM_005444) promoter-TSS (NM_005444) 76 NM_020935 57695 Hs.166068 NM_020935 ENSG00000135913 USP37 - ubiquitin specific peptidase 37 protein-coding chr9-334 chr9 111362601 111362845 + 41.9 0.000 intron (NM_001363756, intron 48 of 48) MIRb|SINE|MIR -32499 NM_205859 26248 Hs.381312 NM_205859 ENSG00000171133 OR2K2 HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P olfactory receptor family 2 subfamily K member 2 protein-coding chr19-360 chr19 55653782 55654026 + 41.9 0.000 promoter-TSS (NM_007279) promoter-TSS (NM_007279) -146 NM_007279 11338 Hs.528007 NM_007279 ENSG00000063244 U2AF2 U2AF65 U2 small nuclear RNA auxiliary factor 2 protein-coding chr16-115 chr16 3021754 3021998 + 41.9 0.000 TTS (NM_017885) TTS (NM_017885) 1508 NM_016639 51330 Hs.355899 NM_016639 ENSG00000006327 TNFRSF12A CD266|FN14|TWEAKR TNF receptor superfamily member 12A protein-coding chr17-136 chr17 43483736 43483980 + 41.7 0.000 promoter-TSS (NM_001302623) promoter-TSS (NM_001302623) -7 NM_001322216 1659 Hs.463105 NM_004941 ENSG00000067596 DHX8 DDX8|Dhr2|HRH1|PRP22|PRPF22 DEAH-box helicase 8 protein-coding chr1-401 chr1 240191006 240191250 + 41.7 0.000 intron (NM_001348094, intron 4 of 14) intron (NM_001348094, intron 4 of 14) 99245 NM_001305424 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding KI270729.1-2 KI270729.1 5722 5966 + 41.7 0.000 NA NA NA NA chr12-103 chr12 6735726 6735970 + 41.7 0.000 Intergenic L1MD2|LINE|L1 11561 NM_001164093 50813 Hs.530823 NM_016319 ENSG00000111652 COPS7A CSN7|CSN7A|SGN7a COP9 signalosome subunit 7A protein-coding chr1-307 chr1 38012504 38012748 + 41.7 0.000 promoter-TSS (NM_016037) promoter-TSS (NM_016037) -108 NM_016037 51118 Hs.472038 NM_016037 ENSG00000183520 UTP11 CGI-94|CGI94|UTP11L UTP11 small subunit processome component protein-coding chr16-170 chr16 74700824 74701068 + 41.7 0.000 promoter-TSS (NM_152649) promoter-TSS (NM_152649) -84 NM_152649 197259 Hs.119878 NM_152649 ENSG00000168404 MLKL hMLKL mixed lineage kinase domain like pseudokinase protein-coding chr1-427 chr1 228103274 228103518 + 41.7 0.000 promoter-TSS (NM_024319) promoter-TSS (NM_024319) -71 NR_130975 79169 Hs.445952 NM_024319 ENSG00000143793 C1orf35 MMTAG2 chromosome 1 open reading frame 35 protein-coding chr3-118 chr3 139389506 139389750 + 41.6 0.000 promoter-TSS (NM_004766) promoter-TSS (NM_004766) 19 NM_004766 9276 Hs.681616 NM_004766 ENSG00000184432 COPB2 MCPH19|beta'-COP coatomer protein complex subunit beta 2 protein-coding chr4-102 chr4 148026158 148026402 + 41.6 0.000 intron (NM_024605, intron 19 of 22) intron (NM_024605, intron 19 of 22) 243685 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr15-86 chr15 91867664 91867908 + 41.6 0.000 intron (NR_135775, intron 1 of 10) intron (NR_135775, intron 1 of 10) 13482 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr9-90 chr9 127715659 127715903 + 41.6 0.000 promoter-TSS (NM_001317037) promoter-TSS (NM_001317037) -105 NM_001345979 138428 Hs.653265 NM_001002913 ENSG00000187024 PTRH1 C9orf115|PTH1 peptidyl-tRNA hydrolase 1 homolog protein-coding chr9-93 chr9 130446281 130446525 + 41.4 0.000 intron (NM_054012, intron 1 of 14) intron (NM_054012, intron 1 of 14) 1442 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr10-77 chr10 79488371 79488615 + 41.4 0.000 Intergenic Intergenic 22489 NR_136625 729815 Hs.564060 NR_136624 ENSG00000235705 LOC729815 - uncharacterized LOC729815 ncRNA chr3-215 chr3 194003196 194003440 + 41.4 0.000 intron (NR_033944, intron 1 of 2) CpG 341 NR_033944 647323 Hs.652830 NR_033944 ENSG00000214146 LINC02026 - long intergenic non-protein coding RNA 2026 ncRNA chr10-3 chr10 41859815 41860059 + 41.4 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 508108 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr15-106 chr15 96428707 96428951 + 41.4 0.000 Intergenic Intergenic 95064 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr13-23 chr13 110615533 110615777 + 41.4 0.000 promoter-TSS (NM_001242881) promoter-TSS (NM_001242881) 71 NM_018210 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr9-122 chr9 97039167 97039411 + 41.4 0.000 promoter-TSS (NM_001333) promoter-TSS (NM_001333) -147 NM_001333 1515 Hs.610096 NM_001333 ENSG00000136943 CTSV CATL2|CTSL2|CTSU cathepsin V protein-coding chr13-98 chr13 101455981 101456225 + 41.4 0.000 intron (NM_001271755, intron 2 of 9) intron (NM_001271755, intron 2 of 9) 3428 NM_001271754 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr20-70 chr20 45857383 45857627 + 41.4 0.000 promoter-TSS (NM_080752) promoter-TSS (NM_080752) -76 NR_037628 140831 Hs.292135 NM_080752 ENSG00000132801 ZSWIM3 C20orf164|PPP1R174 zinc finger SWIM-type containing 3 protein-coding chr1-158 chr1 212035402 212035646 + 41.3 0.000 promoter-TSS (NM_016448) promoter-TSS (NM_016448) -29 NM_001286230 51514 Hs.656473 NM_016448 ENSG00000143476 DTL CDT2|DCAF2|L2DTL|RAMP denticleless E3 ubiquitin protein ligase homolog protein-coding chr5-122 chr5 81420335 81420579 + 41.3 0.000 3' UTR (NM_001256732, exon 17 of 17) 3' UTR (NM_001256732, exon 17 of 17) -26323 NM_130767 134526 Hs.591756 NM_130767 ENSG00000172497 ACOT12 CACH-1|Cach|STARD15|THEAL acyl-CoA thioesterase 12 protein-coding chrX-36 chrX 47541223 47541467 + 41.3 0.000 Intergenic Intergenic -19755 NM_001256196 369 Hs.446641 NM_001654 ENSG00000078061 ARAF A-RAF|ARAF1|PKS2|RAFA1 A-Raf proto-oncogene, serine/threonine kinase protein-coding chr19-300 chr19 12440558 12440802 + 41.3 0.000 intron (NM_005815, intron 1 of 3) CpG 341 NM_005815 10224 Hs.636894 NM_005815 ENSG00000180855 ZNF443 ZK1 zinc finger protein 443 protein-coding chr16-146 chr16 58629906 58630150 + 41.3 0.000 promoter-TSS (NM_001265612) promoter-TSS (NM_001265612) -202 NM_206999 23019 Hs.460923 NM_016284 ENSG00000125107 CNOT1 AD-005|CDC39|NOT1|NOT1H CCR4-NOT transcription complex subunit 1 protein-coding chr8-150 chr8 16416309 16416553 + 41.3 0.000 Intergenic Intergenic -223640 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding chr1-163 chr1 9473110 9473354 + 41.3 0.000 Intergenic Intergenic -44236 NR_104622 100506022 Hs.131775 NR_104622 ENSG00000284693 LINC02606 - long intergenic non-protein coding RNA 2606 ncRNA chr8-68 chr8 66747988 66748232 + 41.3 0.000 intron (NM_001033578, intron 1 of 16) intron (NM_001033578, intron 1 of 16) 19924 NR_002734 26255 Hs.647156 NR_002734 ENSG00000213005 PTTG3P PTTG3|rcPTTG1 pituitary tumor-transforming 3, pseudogene pseudo chr10-108 chr10 80136226 80136470 + 41.3 0.000 intron (NM_001012973, intron 1 of 3) intron (NM_001012973, intron 1 of 3) 3618 NM_001331125 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr15-28 chr15 64460364 64460608 + 41.3 0.000 Intergenic CpG -38934 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding chr15-75 chr15 85296661 85296905 + 41.3 0.000 Intergenic Intergenic 56432 NM_001310153 100133220 Hs.454625 NM_001310153 GOLGA6L3 - golgin A6 family like 3 protein-coding chr8-17 chr8 66613286 66613530 + 41.1 0.000 promoter-TSS (NM_001080416) promoter-TSS (NM_001080416) -190 NM_001080416 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr2-269 chr2 99278959 99279203 + 41.1 0.000 Intergenic Intergenic 22116 NM_174898 129530 Hs.164589 NM_174898 ENSG00000144214 LYG1 SALW1939 lysozyme g1 protein-coding chr2-55 chr2 41840795 41841039 + 41.1 0.000 Intergenic CpG -36638 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chrY-1 chrY 11333087 11333331 + 41.1 0.000 Intergenic CpG 1088381 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr19-235 chr19 56368075 56368319 + 41.1 0.000 promoter-TSS (NR_003127) promoter-TSS (NR_003127) 76 NR_033418 147947 Hs.467326 NM_194319 ENSG00000240225 ZNF542P ZNF542 zinc finger protein 542, pseudogene pseudo chr2-340 chr2 74483019 74483263 + 41.1 0.000 promoter-TSS (NM_022492) promoter-TSS (NM_022492) 60 NR_027749 64427 Hs.557709 NM_022492 ENSG00000115282 TTC31 - tetratricopeptide repeat domain 31 protein-coding chr12-67 chr12 106987021 106987265 + 41.1 0.000 promoter-TSS (NM_025198) promoter-TSS (NM_025198) 3 NM_001033050 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chr10-106 chr10 13586802 13587046 + 41.1 0.000 promoter-TSS (NM_003675) promoter-TSS (NM_003675) -41 NM_003675 8559 Hs.660649 NM_003675 ENSG00000165630 PRPF18 PRP18|hPrp18 pre-mRNA processing factor 18 protein-coding chr13-79 chr13 95924696 95924940 + 41.0 0.000 intron (NM_020121, intron 20 of 38) MLT1F|LTR|ERVL-MaLR 128583 NM_020121 55757 Hs.193226 NM_020121 ENSG00000102595 UGGT2 HUGT2|UGCGL2|UGT2 UDP-glucose glycoprotein glucosyltransferase 2 protein-coding chr22-77 chr22 17628718 17628962 + 41.0 0.000 promoter-TSS (NM_001039367) promoter-TSS (NM_001039367) -18 NM_001039367 529 Hs.517338 NM_001696 ENSG00000131100 ATP6V1E1 ARCL2C|ATP6E|ATP6E2|ATP6V1E|P31|Vma4 ATPase H+ transporting V1 subunit E1 protein-coding chr9-53 chr9 121201759 121202003 + 41.0 0.000 promoter-TSS (NM_016322) promoter-TSS (NM_016322) -12 NM_016322 51552 Hs.371563 NM_016322 ENSG00000119396 RAB14 FBP|RAB-14 RAB14, member RAS oncogene family protein-coding chr17-87 chr17 17512021 17512265 + 41.0 0.000 intron (NM_148173, intron 4 of 6) intron (NM_148173, intron 4 of 6) -15748 NM_001199989 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr6-71 chr6 136822628 136822872 + 41.0 0.000 exon (NM_000288, exon 1 of 10) exon (NM_000288, exon 1 of 10) 158 NM_000288 5191 Hs.280932 NM_000288 ENSG00000112357 PEX7 PBD9B|PTS2R|RCDP1|RD peroxisomal biogenesis factor 7 protein-coding chr13-21 chr13 113562483 113562727 + 41.0 0.000 Intergenic Intergenic -22083 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr2-76 chr2 208266006 208266250 + 41.0 0.000 promoter-TSS (NM_015040) promoter-TSS (NM_015040) -127 NM_015040 200576 Hs.744997 NM_015040 ENSG00000115020 PIKFYVE CFD|FAB1|HEL37|PIP5K|PIP5K3|ZFYVE29 phosphoinositide kinase, FYVE-type zinc finger containing protein-coding chr2-386 chr2 12588296 12588540 + 41.0 0.000 Intergenic MER44B|DNA|TcMar-Tigger -128454 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr5-158 chr5 10192356 10192600 + 41.0 0.000 Intergenic Intergenic 57410 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr7-128 chr7 47392476 47392720 + 41.0 0.000 intron (NM_022748, intron 16 of 30) intron (NM_022748, intron 16 of 30) 72205 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr12-110 chr12 6663217 6663461 + 41.0 0.000 promoter-TSS (NM_001127583) promoter-TSS (NM_001127583) -220 NM_001127586 51147 Hs.524210 NM_016162 ENSG00000111653 ING4 my036|p29ING4 inhibitor of growth family member 4 protein-coding chr1-183 chr1 1074152 1074396 + 41.0 0.000 promoter-TSS (NM_001205252) promoter-TSS (NM_001205252) 32 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr4-96 chr4 127632713 127632957 + 40.8 0.000 promoter-TSS (NM_015693) promoter-TSS (NM_015693) -122 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr19-265 chr19 45455912 45456156 + 40.8 0.000 Intergenic Intergenic -4487 NM_001369412 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr14-48 chr14 73752540 73752784 + 40.8 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -6085 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr12-99 chr12 110048328 110048572 + 40.8 0.000 non-coding (NR_148516, exon 1 of 2) non-coding (NR_148516, exon 1 of 2) 197 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr2-148 chr2 105037818 105038062 + 40.8 0.000 promoter-TSS (NM_182640) promoter-TSS (NM_182640) -129 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding chr11-87 chr11 2097482 2097726 + 40.8 0.000 Intergenic Intergenic 36605 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr14-77 chr14 60165413 60165657 + 40.8 0.000 promoter-TSS (NM_001322281) promoter-TSS (NM_001322281) -42 NM_001322282 51635 Hs.59719 NM_016029 ENSG00000100612 DHRS7 CGI-86|SDR34C1|retDSR4|retSDR4 dehydrogenase/reductase 7 protein-coding chr2-296 chr2 128374262 128374506 + 40.8 0.000 Intergenic Intergenic -55516 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr7-124 chr7 6483987 6484231 + 40.8 0.000 promoter-TSS (NM_006854) promoter-TSS (NM_006854) 43 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr14-87 chr14 75281361 75281605 + 40.8 0.000 3' UTR (NM_005252, exon 4 of 4) 3' UTR (NM_005252, exon 4 of 4) 2655 NM_005252 2353 Hs.25647 NM_005252 ENSG00000170345 FOS AP-1|C-FOS|p55 Fos proto-oncogene, AP-1 transcription factor subunit protein-coding chr9-108 chr9 114387713 114387957 + 40.8 0.000 intron (NM_030767, intron 1 of 21) intron (NM_030767, intron 1 of 21) 147 NM_001317950 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr14-76 chr14 50560468 50560712 + 40.8 0.000 intron (NM_015915, intron 1 of 13) CpG 565 NM_015915 51062 Hs.584905 NM_015915 ENSG00000198513 ATL1 AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1 atlastin GTPase 1 protein-coding chr1-317 chr1 111739308 111739552 + 40.8 0.000 promoter-TSS (NR_038951) promoter-TSS (NR_038951) -35 NM_019099 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr6-64 chr6 135054714 135054958 + 40.7 0.000 promoter-TSS (NM_001363686) promoter-TSS (NM_001363686) -14 NM_006620 10767 Hs.378532 NM_006620 ENSG00000112339 HBS1L EF-1a|ERFS|HBS1|HSPC276|eRF3c HBS1 like translational GTPase protein-coding chr10-71 chr10 104268978 104269222 + 40.7 0.000 promoter-TSS (NR_039702) promoter-TSS (NR_039702) -84 NM_183239 119391 Hs.107384 NM_183239 ENSG00000065621 GSTO2 GSTO 2-2|bA127L20.1 glutathione S-transferase omega 2 protein-coding chr4-116 chr4 14856542 14856786 + 40.7 0.000 intron (NR_126435, intron 2 of 6) intron (NR_126435, intron 2 of 6) 31505 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA chr12-187 chr12 751178 751422 + 40.7 0.000 Intergenic Intergenic -1279 NM_014823 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr11-343 chr11 114295024 114295268 + 40.7 0.000 promoter-TSS (NM_006169) promoter-TSS (NM_006169) -667 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr7-219 chr7 6577427 6577671 + 40.7 0.000 promoter-TSS (NM_001371292) promoter-TSS (NM_001371292) 95 NM_001371295 chr12-109 chr12 4604866 4605110 + 40.7 0.000 exon (NM_003845, exon 9 of 13) exon (NM_003845, exon 9 of 13) 125 NM_001282286 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding chr19-463 chr19 40603802 40604046 + 40.7 0.000 intron (NM_001042545, intron 1 of 29) CpG 2555 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr4-106 chr4 141246292 141246536 + 40.7 0.000 Intergenic MamRTE1|LINE|RTE-BovB 25519 NM_001292002 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding chr7-192 chr7 44116165 44116409 + 40.5 0.000 intron (NM_006230, intron 7 of 10) intron (NM_006230, intron 7 of 10) 5438 NR_039792 100616346 NR_039792 ENSG00000284412 MIR4649 mir-4649 microRNA 4649 ncRNA chr10-442 chr10 114261136 114261380 + 40.5 0.000 exon (NM_001320804, exon 5 of 14) exon (NM_001320804, exon 5 of 14) 21644 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr3-49 chr3 48088931 48089175 + 40.5 0.000 promoter-TSS (NM_030885) promoter-TSS (NM_030885) -205 NM_030885 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr10-123 chr10 126315707 126315951 + 40.5 0.000 intron (NM_001288974, intron 2 of 18) intron (NM_001288974, intron 2 of 18) 72648 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr4-55 chr4 127965267 127965511 + 40.4 0.000 promoter-TSS (NM_001319305) promoter-TSS (NM_001319305) -17 NM_001366046 80167 Hs.143995 NM_025097 ENSG00000164074 ABHD18 C4orf29 abhydrolase domain containing 18 protein-coding chr2-11 chr2 112054940 112055184 + 40.4 0.000 promoter-TSS (NM_032824) promoter-TSS (NM_032824) -207 NM_001329914 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr3-296 chr3 190345190 190345434 + 40.4 0.000 Intergenic Intergenic -22866 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding chr17-347 chr17 57948793 57949037 + 40.4 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 6497 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr15-38 chr15 90994538 90994782 + 40.4 0.000 promoter-TSS (NM_003981) promoter-TSS (NM_003981) -125 NM_003981 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr3-98 chr3 196740177 196740421 + 40.4 0.000 intron (NM_002577, intron 1 of 14) CpG 442 NM_002577 5062 Hs.518530 NM_002577 ENSG00000180370 PAK2 PAK65|PAKgamma p21 (RAC1) activated kinase 2 protein-coding chr7-226 chr7 47724718 47724962 + 40.4 0.000 Intergenic Intergenic -36636 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr3-290 chr3 139302333 139302577 + 40.4 0.000 Intergenic Intergenic -41539 NM_001363893 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr11-118 chr11 76860842 76861086 + 40.4 0.000 promoter-TSS (NM_018367) promoter-TSS (NM_018367) 46 NM_001300954 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr9-360 chr9 110157048 110157292 + 40.2 0.000 intron (NM_147150, intron 9 of 9) intron (NM_147150, intron 9 of 9) 31669 NM_001136562 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr14-50 chr14 77097992 77098236 + 40.2 0.000 promoter-TSS (NM_033426) promoter-TSS (NM_033426) -144 NM_033426 85457 Hs.709066 NM_033426 ENSG00000198894 CIPC KIAA1737 CLOCK interacting pacemaker protein-coding chr12-266 chr12 15882114 15882358 + 40.2 0.000 promoter-TSS (NM_007178) promoter-TSS (NM_007178) -151 NM_007178 11171 Hs.743971 NM_007178 ENSG00000023734 STRAP MAWD|PT-WD|UNRIP serine/threonine kinase receptor associated protein protein-coding chr7-111 chr7 66115266 66115510 + 40.2 0.000 intron (NM_001040648, intron 1 of 2) intron (NM_001040648, intron 1 of 2) 541 NM_014478 27297 Hs.300684 NM_014478 ENSG00000241258 CRCP CGRP-RCP|CGRPRCP|RCP|RCP9|RPC9 CGRP receptor component protein-coding chr4-124 chr4 185839235 185839479 + 40.2 0.000 intron (NM_021069, intron 1 of 20) intron (NM_021069, intron 1 of 20) -27101 NM_003603 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr5-37 chr5 177497619 177497863 + 40.2 0.000 promoter-TSS (NM_213636) promoter-TSS (NM_213636) -136 NM_213636 9260 Hs.533040 NM_005451 ENSG00000196923 PDLIM7 LMP1|LMP3 PDZ and LIM domain 7 protein-coding chr19-221 chr19 1213799 1214043 + 40.2 0.000 intron (NM_000455, intron 1 of 9) intron (NM_000455, intron 1 of 9) 8122 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr6-128 chr6 106591664 106591908 + 40.1 0.000 intron (NM_032730, intron 6 of 8) intron (NM_032730, intron 6 of 8) 37712 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr14-103 chr14 53217606 53217850 + 40.1 0.000 Intergenic LTR12C|LTR|ERV1 64374 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr17-294 chr17 77429853 77430097 + 40.1 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -20774 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr8-65 chr8 143940616 143940860 + 40.1 0.000 intron (NM_000445, intron 2 of 32) intron (NM_000445, intron 2 of 32) -1141 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr1-300 chr1 222371396 222371640 + 40.1 0.000 Intergenic Intergenic 176586 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr4-44 chr4 158210425 158210669 + 40.1 0.000 promoter-TSS (NM_018342) promoter-TSS (NM_018342) 61 NM_018342 55314 Hs.176227 NM_018342 ENSG00000164124 TMEM144 - transmembrane protein 144 protein-coding chr11-203 chr11 33700879 33701123 + 39.9 0.000 promoter-TSS (NM_001166692) promoter-TSS (NM_001166692) -261 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr7-135 chr7 2018799 2019043 + 39.9 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 70131 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr5-164 chr5 96662002 96662246 + 39.9 0.000 promoter-TSS (NM_001042440) promoter-TSS (NM_001042440) 87 NM_001042442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr9-191 chr9 6412971 6413215 + 39.9 0.000 promoter-TSS (NR_046386) promoter-TSS (NR_046386) -58 NR_046386 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr8-14 chr8 144901561 144901805 + 39.9 0.000 promoter-TSS (NM_001363101) promoter-TSS (NM_001363101) -230 NM_001363098 58500 Hs.532277 NM_021061 ENSG00000196150 ZNF250 ZFP647|ZNF647 zinc finger protein 250 protein-coding chr17-141 chr17 7035892 7036136 + 39.9 0.000 promoter-TSS (NM_201566) promoter-TSS (NM_201566) -1 NM_201566 201232 Hs.448010 NM_201566 ENSG00000174327 SLC16A13 MCT13 solute carrier family 16 member 13 protein-coding chr1-276 chr1 150507916 150508160 + 39.9 0.000 promoter-TSS (NM_004425) promoter-TSS (NM_004425) -71 NM_001202858 1893 Hs.81071 NM_004425 ENSG00000143369 ECM1 URBWD extracellular matrix protein 1 protein-coding chr22-64 chr22 35300079 35300323 + 39.9 0.000 intron (NR_156428, intron 1 of 13) intron (NR_156428, intron 1 of 13) 307 NR_024195 10043 Hs.474705 NM_005488 ENSG00000100284 TOM1 - target of myb1 membrane trafficking protein protein-coding chr12-71 chr12 53006152 53006396 + 39.9 0.000 promoter-TSS (NM_001417) promoter-TSS (NM_001417) -182 NM_001417 1975 Hs.648394 NM_001417 ENSG00000063046 EIF4B EIF-4B|PRO1843 eukaryotic translation initiation factor 4B protein-coding chr2-305 chr2 224754244 224754488 + 39.9 0.000 Intergenic Intergenic -168969 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chrY-5 chrY 11305196 11305440 + 39.9 0.000 Intergenic BSR/Beta|Satellite|Satellite 1116272 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr1-410 chr1 28369487 28369731 + 39.8 0.000 promoter-TSS (NM_001350161) promoter-TSS (NM_001350161) -131 NM_001350159 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr1-313 chr1 58903805 58904049 + 39.8 0.000 Intergenic CpG -116549 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr11-466 chr11 65261730 65261974 + 39.8 0.000 promoter-TSS (NM_002689) promoter-TSS (NM_002689) -110 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr19-70 chr19 16628145 16628389 + 39.8 0.000 promoter-TSS (NM_004831) promoter-TSS (NM_004831) -63 NM_004831 9441 Hs.715040 NM_004831 ENSG00000105085 MED26 CRSP7|CRSP70 mediator complex subunit 26 protein-coding chr11-156 chr11 117210791 117211035 + 39.8 0.000 intron (NM_004716, intron 12 of 16) AluSz6|SINE|Alu -8999 NR_045215 100652768 Hs.732365 NR_045215 LOC100652768 - uncharacterized LOC100652768 ncRNA chr13-70 chr13 49247660 49247904 + 39.8 0.000 promoter-TSS (NM_001193478) promoter-TSS (NM_001193478) 58 NR_135318 105370203 Hs.569238 NR_135318 LOC105370203 - uncharacterized LOC105370203 ncRNA chr14-231 chr14 103664170 103664414 + 39.8 0.000 intron (NM_182923, intron 5 of 14) AluSz|SINE|Alu 35104 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr16-66 chr16 46884152 46884396 + 39.8 0.000 promoter-TSS (NM_133443) promoter-TSS (NM_133443) -88 NM_133443 84706 Hs.460693 NM_133443 ENSG00000166123 GPT2 ALT2|GPT 2|MRT49 glutamic--pyruvic transaminase 2 protein-coding chr18-46 chr18 22932964 22933208 + 39.8 0.000 promoter-TSS (NR_039895) promoter-TSS (NR_039895) -242 NM_002894 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr11-238 chr11 65355746 65355990 + 39.8 0.000 exon (NM_145719, exon 2 of 2) exon (NM_145719, exon 2 of 2) 1117 NM_145719 220359 Hs.632121 NM_145719 ENSG00000173825 TIGD3 - tigger transposable element derived 3 protein-coding chr9-155 chr9 34049287 34049531 + 39.8 0.000 promoter-TSS (NM_018449) promoter-TSS (NM_018449) -210 NM_001370059 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr3-171 chr3 136250345 136250589 + 39.8 0.000 exon (NM_001178014, exon 1 of 16) exon (NM_001178014, exon 1 of 16) 127 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding GL000225.1-2 GL000225.1 81014 81258 + 39.8 0.000 NA NA NA NA chr1-211 chr1 93989023 93989267 + 39.8 0.000 Intergenic Intergenic -79547 NM_001308253 2730 Hs.315562 NM_002061 ENSG00000023909 GCLM GLCLR glutamate-cysteine ligase modifier subunit protein-coding chr8-54 chr8 92965534 92965778 + 39.8 0.000 promoter-TSS (NM_001191036) promoter-TSS (NM_001191036) -67 NM_001191036 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr2-380 chr2 240687163 240687407 + 39.8 0.000 non-coding (NR_149021, exon 1 of 3) non-coding (NR_149021, exon 1 of 3) 951 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr6-122 chr6 158057542 158057786 + 39.6 0.000 intron (NM_003898, intron 6 of 26) LTR79|LTR|ERVL 40571 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr3-321 chr3 171028293 171028537 + 39.6 0.000 Intergenic CpG -1695 NM_001278659 6514 Hs.167584 NM_000340 ENSG00000163581 SLC2A2 GLUT2 solute carrier family 2 member 2 protein-coding chr2-174 chr2 86194994 86195238 + 39.6 0.000 intron (NM_006839, intron 1 of 14) CpG 654 NM_006839 10989 Hs.148559 NM_006839 ENSG00000132305 IMMT HMP|MICOS60|MINOS2|Mic60|P87|P87/89|P89|PIG4|PIG52 inner membrane mitochondrial protein protein-coding chr8-13 chr8 143291236 143291480 + 39.6 0.000 promoter-TSS (NM_030895) promoter-TSS (NM_030895) -59 NM_030895 79943 Hs.512740 NM_030895 ENSG00000185730 ZNF696 - zinc finger protein 696 protein-coding chr17-111 chr17 8295280 8295524 + 39.6 0.000 promoter-TSS (NM_001320872) promoter-TSS (NM_001320872) -2 NM_001320871 399512 Hs.118918 NM_201520 ENSG00000125434 SLC25A35 - solute carrier family 25 member 35 protein-coding chr19-191 chr19 49443566 49443810 + 39.6 0.000 Intergenic CpG -2161 NM_020309 57030 Hs.375616 NM_020309 ENSG00000104888 SLC17A7 BNPI|VGLUT1 solute carrier family 17 member 7 protein-coding chr1-368 chr1 213987822 213988066 + 39.6 0.000 promoter-TSS (NM_002763) promoter-TSS (NM_002763) -29 NM_001270616 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding chr12-167 chr12 52060262 52060506 + 39.6 0.000 TTS (NM_001202233) TTS (NM_001202233) 8942 NM_173157 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr11-279 chr11 64996812 64997056 + 39.6 0.000 promoter-TSS (NM_138456) promoter-TSS (NM_138456) 37 NM_138456 116071 Hs.124840 NM_138456 ENSG00000168062 BATF2 SARI basic leucine zipper ATF-like transcription factor 2 protein-coding chr12-69 chr12 30754860 30755104 + 39.6 0.000 promoter-TSS (NM_001319846) promoter-TSS (NM_001319846) -31 NM_001319845 65981 Hs.234355 NM_023925 ENSG00000110888 CAPRIN2 C1QDC1|EEG-1|EEG1|RNG140 caprin family member 2 protein-coding chr4-63 chr4 152779744 152779988 + 39.6 0.000 promoter-TSS (NM_001025593) promoter-TSS (NM_001025593) -71 NM_001287433 27236 Hs.416089 NM_014447 ENSG00000164144 ARFIP1 HSU52521 ADP ribosylation factor interacting protein 1 protein-coding chr3-211 chr3 155070980 155071224 + 39.6 0.000 intron (NM_001354642, intron 1 of 22) intron (NM_001354642, intron 1 of 22) -8570 NM_000902 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr3-124 chr3 14452866 14453110 + 39.6 0.000 intron (NR_103507, intron 5 of 13) intron (NR_103507, intron 5 of 13) 50382 NR_103507 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr3-69 chr3 98901647 98901891 + 39.5 0.000 promoter-TSS (NM_080927) promoter-TSS (NM_080927) -74 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr11-276 chr11 62556182 62556426 + 39.5 0.000 Intergenic Intergenic 4002 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA chr9-129 chr9 37412541 37412785 + 39.5 0.000 Intergenic Intergenic -10033 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding chr7-148 chr7 5823020 5823264 + 39.5 0.000 promoter-TSS (NR_023382) promoter-TSS (NR_023382) -18 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr11-149 chr11 18634317 18634561 + 39.5 0.000 promoter-TSS (NM_194285) promoter-TSS (NM_194285) -97 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr8-34 chr8 92966050 92966294 + 39.5 0.000 promoter-TSS (NM_001171795) promoter-TSS (NM_001171795) -28 NM_001171797 286144 Hs.440643 NM_001171795 ENSG00000205133 TRIQK C8orf83|PRO0845|UPF0599 triple QxxK/R motif containing protein-coding chr13-31 chr13 76991920 76992164 + 39.5 0.000 promoter-TSS (NM_001366624) promoter-TSS (NM_001366624) -39 NM_006493 1203 Hs.30213 NM_006493 ENSG00000102805 CLN5 - CLN5 intracellular trafficking protein protein-coding chr10-80 chr10 95561255 95561499 + 39.5 0.000 promoter-TSS (NM_024991) promoter-TSS (NM_024991) -6 NM_001290295 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding chr9-329 chr9 37487339 37487583 + 39.5 0.000 intron (NM_001282766, intron 2 of 12) L2b|LINE|L2 1513 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding chr8-131 chr8 60652064 60652308 + 39.5 0.000 Intergenic CpG -26554 NM_017780 55636 Hs.20395 NM_017780 ENSG00000171316 CHD7 CRG|HH5|IS3|KAL5 chromodomain helicase DNA binding protein 7 protein-coding chr4-99 chr4 10109507 10109751 + 39.5 0.000 intron (NM_017491, intron 2 of 14) intron (NM_017491, intron 2 of 14) 7170 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr17-224 chr17 732743 732987 + 39.5 0.000 intron (NM_001318007, intron 1 of 3) CpG 269 NM_024792 79850 Hs.154396 NM_024792 ENSG00000167695 TLCD3A CT120|FAM57A TLC domain containing 3A protein-coding chr4-244 chr4 118989263 118989507 + 39.5 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 100531 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr3-200 chr3 62109589 62109833 + 39.3 0.000 intron (NM_002841, intron 5 of 29) LTR41C|LTR|ERVL 209236 NR_038283 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA chr7-193 chr7 73895006 73895250 + 39.3 0.000 Intergenic Intergenic 33969 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr7-131 chr7 105679033 105679277 + 39.3 0.000 promoter-TSS (NM_001318229) promoter-TSS (NM_001318229) 0 NM_001318229 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr19-322 chr19 40716753 40716997 + 39.3 0.000 promoter-TSS (NM_024876) promoter-TSS (NM_024876) 11 NM_024876 79934 Hs.130712 NM_024876 ENSG00000123815 COQ8B ADCK4|NPHS9 coenzyme Q8B protein-coding chr6-98 chr6 151446231 151446475 + 39.3 0.000 intron (NM_017909, intron 1 of 11) AluJb|SINE|Alu 5773 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr10-111 chr10 103452178 103452422 + 39.3 0.000 promoter-TSS (NR_024552) promoter-TSS (NR_024552) 70 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr9-70 chr9 97697288 97697532 + 39.3 0.000 promoter-TSS (NR_149091) promoter-TSS (NR_149091) -1 NR_149093 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding chr17-177 chr17 62614235 62614479 + 39.3 0.000 3' UTR (NM_001284333, exon 23 of 23) 3' UTR (NM_001284333, exon 23 of 23) -13313 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr5-154 chr5 151699136 151699380 + 39.3 0.000 Intergenic Intergenic -12343 NM_001309443 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr22-176 chr22 29306344 29306588 + 39.3 0.000 promoter-TSS (NM_001362985) promoter-TSS (NM_001362985) -557 NM_152236 10634 Hs.322852 NM_006478 ENSG00000185340 GAS2L1 GAR22 growth arrest specific 2 like 1 protein-coding chr11-117 chr11 69443414 69443658 + 39.3 0.000 Intergenic CpG 17881 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr1-115 chr1 224356827 224357071 + 39.3 0.000 promoter-TSS (NM_014184) promoter-TSS (NM_014184) 70 NM_001277200 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr10-128 chr10 33661905 33662149 + 39.2 0.000 Intergenic Intergenic 110653 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr17-208 chr17 18682187 18682431 + 39.2 0.000 promoter-TSS (NM_001368134) promoter-TSS (NM_001368134) 5 NR_160540 729288 Hs.534279 NM_001145045 ENSG00000249459 ZNF286B FOXO3B|ZNF286C|ZNF286L|ZNF590 zinc finger protein 286B (pseudogene) pseudo chr7-95 chr7 73557048 73557292 + 39.2 0.000 promoter-TSS (NR_036682) promoter-TSS (NR_036682) 66 NR_036682 9275 Hs.647051 NM_001707 ENSG00000106635 BCL7B - BAF chromatin remodeling complex subunit BCL7B protein-coding chr2-121 chr2 201451430 201451674 + 39.2 0.000 promoter-TSS (NM_001206864) promoter-TSS (NM_001206864) -94 NM_015049 66008 Hs.152774 NM_015049 ENSG00000115993 TRAK2 ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 trafficking kinesin protein 2 protein-coding chr10-109 chr10 92243261 92243505 + 39.2 0.000 promoter-TSS (NM_001178137) promoter-TSS (NM_001178137) -104 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding chr3-75 chr3 113019483 113019727 + 39.2 0.000 promoter-TSS (NM_001319111) promoter-TSS (NM_001319111) 66 NM_001319110 25871 Hs.591288 NM_015412 ENSG00000163608 NEPRO C3orf17|NET17 nucleolus and neural progenitor protein protein-coding chr14-94 chr14 100375453 100375697 + 39.2 0.000 promoter-TSS (NM_001350947) promoter-TSS (NM_001350947) -228 NM_004184 7453 Hs.497599 NM_004184 ENSG00000140105 WARS GAMMA-2|HMN9|IFI53|IFP53 tryptophanyl-tRNA synthetase protein-coding chr7-157 chr7 102117780 102118024 + 39.2 0.000 intron (NM_001913, intron 8 of 22) intron (NM_001913, intron 8 of 22) -167239 NM_020979 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-280 chr1 212470121 212470365 + 39.2 0.000 Intergenic Intergenic 37323 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr8-67 chr8 47627752 47627996 + 39.2 0.000 intron (NM_001080394, intron 10 of 19) intron (NM_001080394, intron 10 of 19) -26214 NM_001352959 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr1-481 chr1 39829970 39830214 + 39.2 0.000 Intergenic L2c|LINE|L2 41116 NR_135805 101929536 Hs.552820 NR_135805 ENSG00000261798 LOC101929536 - uncharacterized LOC101929536 ncRNA chr19-159 chr19 1269114 1269358 + 39.2 0.000 promoter-TSS (NR_023313) promoter-TSS (NR_023313) -32 NM_001280 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr1-239 chr1 113073050 113073294 + 39.2 0.000 promoter-TSS (NR_103777) promoter-TSS (NR_103777) -26 NM_014813 9860 Hs.448972 NM_014813 ENSG00000198799 LRIG2 LIG-2|LIG2|UFS2 leucine rich repeats and immunoglobulin like domains 2 protein-coding chr20-103 chr20 17959711 17959955 + 39.2 0.000 intron (NM_001282454, intron 1 of 12) intron (NM_001282454, intron 1 of 12) 3113 NR_003045 692086 Hs.680747 NR_003045 ENSG00000212232 SNORD17 HBI-43 small nucleolar RNA, C/D box 17 snoRNA chr18-43 chr18 74746167 74746411 + 39.2 0.000 intron (NM_001146190, intron 2 of 3) Tigger3b|DNA|TcMar-Tigger 115326 NM_017757 55628 Hs.536490 NM_017757 ENSG00000215421 ZNF407 - zinc finger protein 407 protein-coding chr3-623 chr3 159530016 159530260 + 39.2 0.000 intron (NM_001197108, intron 1 of 6) L1MA4|LINE|L1 238474 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr5-108 chr5 154445660 154445904 + 39.0 0.000 promoter-TSS (NM_001131062) promoter-TSS (NM_001131062) 40 NR_037897 386627 Hs.652021 NR_037897 SAP30L-AS1 GALNT10-AS1 SAP30L antisense RNA 1 (head to head) ncRNA chr8-206 chr8 23330520 23330764 + 39.0 0.000 intron (NM_002318, intron 5 of 13) intron (NM_002318, intron 5 of 13) -5566 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr9-169 chr9 77177085 77177329 + 39.0 0.000 promoter-TSS (NM_015186) promoter-TSS (NM_015186) -238 NM_001018038 23230 Hs.459790 NM_015186 ENSG00000197969 VPS13A CHAC|CHOREIN vacuolar protein sorting 13 homolog A protein-coding chr1-393 chr1 161132534 161132778 + 39.0 0.000 promoter-TSS (NM_001330765) promoter-TSS (NM_001330765) 11 NM_001330765 9191 Hs.744092 NM_004216 ENSG00000158796 DEDD CASP8IP1|DEDD1|DEFT|FLDED1|KE05 death effector domain containing protein-coding chr12-146 chr12 92146124 92146368 + 39.0 0.000 promoter-TSS (NM_001731) promoter-TSS (NM_001731) 161 NR_135037 101928617 Hs.434392 NR_135036 LOC101928617 - uncharacterized LOC101928617 ncRNA chr1-229 chr1 33389480 33389724 + 39.0 0.000 Intergenic Intergenic -14009 NM_198040 1912 Hs.524271 NM_004427 ENSG00000134686 PHC2 EDR2|HPH2|PH2 polyhomeotic homolog 2 protein-coding chr3-120 chr3 183884951 183885195 + 39.0 0.000 promoter-TSS (NR_136893) promoter-TSS (NR_136893) -193 NM_018622 55486 Hs.478469 NM_018622 ENSG00000175193 PARL PRO2207|PSARL|PSARL1|PSENIP2|RHBDS1 presenilin associated rhomboid like protein-coding chr19-389 chr19 18848215 18848459 + 39.0 0.000 intron (NM_002911, intron 3 of 23) intron (NM_002911, intron 3 of 23) 16378 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr11-524 chr11 75347904 75348148 + 38.9 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 3635 NM_020251 408 Hs.503284 NM_004041 ENSG00000137486 ARRB1 ARB1|ARR1 arrestin beta 1 protein-coding chr12-425 chr12 74890241 74890485 + 38.9 0.000 Intergenic Intergenic 319385 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding chrX-12 chrX 149939919 149940163 + 38.9 0.000 intron (NR_027456, intron 1 of 11) intron (NR_027456, intron 1 of 11) 1493 NR_027456 100272228 Hs.496916 NR_027456 ENSG00000235703 LINC00894 - long intergenic non-protein coding RNA 894 ncRNA chr13-55 chr13 36712885 36713129 + 38.9 0.000 Intergenic Intergenic 38987 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding chr10-371 chr10 88932616 88932860 + 38.9 0.000 promoter-TSS (NR_125373) promoter-TSS (NR_125373) 54 NR_125373 100132116 NR_125373 ENSG00000180139 ACTA2-AS1 UC001kfo|ZXF1|uc001kfo.1 ACTA2 antisense RNA 1 ncRNA chr15-121 chr15 90249335 90249579 + 38.9 0.000 promoter-TSS (NR_104604) promoter-TSS (NR_104604) -75 NR_104604 440307 Hs.632164 NM_001029964 ENSG00000213471 TTLL13P TTLL13 tubulin tyrosine ligase like 13, pseudogene pseudo chr8-50 chr8 86342340 86342584 + 38.9 0.000 promoter-TSS (NM_007013) promoter-TSS (NM_007013) -85 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr17-194 chr17 2407179 2407423 + 38.9 0.000 intron (NR_028335, intron 2 of 2) intron (NR_028335, intron 2 of 2) -6241 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr7-234 chr7 129435009 129435253 + 38.7 0.000 intron (NM_020704, intron 1 of 20) intron (NM_020704, intron 1 of 20) 699 NM_001134336 57464 Hs.489988 NM_020704 ENSG00000128578 STRIP2 FAM40B|FAR11B striatin interacting protein 2 protein-coding chr19-395 chr19 34677459 34677703 + 38.7 0.000 promoter-TSS (NM_001289189) promoter-TSS (NM_001289189) -58 NM_001289186 55900 Hs.436350 NM_018443 ENSG00000089335 ZNF302 HSD16|MST154|MSTP154|ZNF135L|ZNF140L|ZNF327 zinc finger protein 302 protein-coding chr7-170 chr7 20330401 20330645 + 38.7 0.000 promoter-TSS (NM_002214) promoter-TSS (NM_002214) -377 NM_002214 3696 Hs.592171 NM_002214 ENSG00000105855 ITGB8 - integrin subunit beta 8 protein-coding chrX-42 chrX 100820229 100820473 + 38.7 0.000 promoter-TSS (NM_001325) promoter-TSS (NM_001325) -8 NM_001325 1478 Hs.132370 NM_001325 ENSG00000101811 CSTF2 CstF-64 cleavage stimulation factor subunit 2 protein-coding chr19-234 chr19 53869214 53869458 + 38.7 0.000 promoter-TSS (NM_001020818) promoter-TSS (NM_001020818) -55 NM_001290189 91663 Hs.380906 NM_138373 ENSG00000179820 MYADM SB135 myeloid associated differentiation marker protein-coding chr1-238 chr1 96721782 96722026 + 38.7 0.000 promoter-TSS (NR_125356) promoter-TSS (NR_125356) 120 NM_001300990 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr11-168 chr11 65652751 65652995 + 38.7 0.000 TTS (NM_001243985) TTS (NM_001243985) 3681 NR_039709 100616284 NR_039709 ENSG00000265874 MIR4489 mir-4489 microRNA 4489 ncRNA chr9-680 chr9 113675520 113675764 + 38.7 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 81513 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr1-244 chr1 156291407 156291651 + 38.7 0.000 promoter-TSS (NM_001323617) promoter-TSS (NM_001323617) -31 NM_001323617 23381 Hs.516837 NM_015327 ENSG00000198952 SMG5 EST1B|LPTS-RP1|LPTSRP1|SMG-5 SMG5 nonsense mediated mRNA decay factor protein-coding chr22-70 chr22 17084815 17085059 + 38.7 0.000 promoter-TSS (NM_001289905) promoter-TSS (NM_001289905) -22 NM_014339 23765 Hs.48353 NM_014339 ENSG00000177663 IL17RA CANDF5|CD217|CDw217|IL-17RA|IL17R|IMD51|hIL-17R interleukin 17 receptor A protein-coding chr10-133 chr10 80132714 80132958 + 38.7 0.000 intron (NM_001012973, intron 1 of 3) CpG 106 NM_001331125 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr5-111 chr5 100595528 100595772 + 38.7 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR 60276 NM_198507 345757 Hs.356108 NM_198507 ENSG00000174132 FAM174A HGS_RE408|NS5ATP6|TMEM157|UNQ1912 family with sequence similarity 174 member A protein-coding chr10-13 chr10 41877781 41878025 + 38.7 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 490142 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr9-354 chr9 70954241 70954485 + 38.7 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -85311 NM_024971 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr16-185 chr16 84599594 84599838 + 38.7 0.000 intron (NM_021149, intron 2 of 3) intron (NM_021149, intron 2 of 3) 18362 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr19-293 chr19 57363153 57363397 + 38.7 0.000 promoter-TSS (NM_173631) promoter-TSS (NM_173631) -160 NM_173631 284306 Hs.446620 NM_173631 ENSG00000152433 ZNF547 MIP-2A|SEDLP1|TRAPPC2.19|TRAPPC2B|TRAPPC2P1 zinc finger protein 547 protein-coding chr13-101 chr13 30389306 30389550 + 38.7 0.000 Intergenic Intergenic -15514 NR_024464 100188949 Hs.439791 NR_024464 ENSG00000238121 LINC00426 - long intergenic non-protein coding RNA 426 ncRNA chr17-180 chr17 1908827 1909071 + 38.6 0.000 Intergenic Intergenic 78944 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr11-111 chr11 66677895 66678139 + 38.6 0.000 promoter-TSS (NM_031492) promoter-TSS (NM_031492) -130 NM_031492 83759 Hs.618713 NM_031492 ENSG00000173914 RBM4B RBM30|RBM4L|ZCCHC15|ZCCHC21B|ZCRB3B RNA binding motif protein 4B protein-coding chr6-193 chr6 41318726 41318970 + 38.6 0.000 Intergenic Intergenic -16760 NM_001199510 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding chr19-352 chr19 36838399 36838643 + 38.6 0.000 promoter-TSS (NM_001242802) promoter-TSS (NM_001242802) -134 NM_206894 388536 Hs.282067 NM_206894 ENSG00000197863 ZNF790 - zinc finger protein 790 protein-coding chr15-35 chr15 25831018 25831262 + 38.6 0.000 intron (NM_024490, intron 1 of 20) intron (NM_024490, intron 1 of 20) 17685 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr5-55 chr5 131797089 131797333 + 38.6 0.000 promoter-TSS (NM_001008738) promoter-TSS (NM_001008738) -194 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding chr1-403 chr1 245969355 245969599 + 38.6 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 447935 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr15-18 chr15 58933638 58933882 + 38.6 0.000 promoter-TSS (NR_135043) promoter-TSS (NR_135043) -81 NM_024755 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding chr7-216 chr7 2175437 2175681 + 38.6 0.000 intron (NM_001013837, intron 10 of 18) HAL1|LINE|L1 57386 NM_003550 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr9-226 chr9 80061995 80062239 + 38.6 0.000 Intergenic LFSINE_Vert|SINE|tRNA 87094 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chrX-35 chrX 18984771 18985015 + 38.6 0.000 promoter-TSS (NM_000292) promoter-TSS (NM_000292) -779 NM_000292 5256 Hs.54941 NM_000292 ENSG00000044446 PHKA2 GSD9A|PHK|PYK|PYKL|XLG|XLG2 phosphorylase kinase regulatory subunit alpha 2 protein-coding chr19-579 chr19 8174660 8174904 + 38.6 0.000 Intergenic Intergenic -25190 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chrX-43 chrX 153934865 153935109 + 38.6 0.000 promoter-TSS (NM_001256120) promoter-TSS (NM_001256120) 50 NM_001256120 8260 Hs.433291 NM_003491 ENSG00000102030 NAA10 ARD1|ARD1A|ARD1P|DXS707|MCOPS1|NATD|OGDNS|TE2|hARD1 N(alpha)-acetyltransferase 10, NatA catalytic subunit protein-coding chr19-332 chr19 40425859 40426103 + 38.6 0.000 promoter-TSS (NM_013376) promoter-TSS (NM_013376) 11 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr2-132 chr2 105261133 105261377 + 38.6 0.000 intron (NM_001328646, intron 11 of 11) intron (NM_001328646, intron 11 of 11) 19512 NM_007227 11250 Hs.590903 NM_007227 ENSG00000135973 GPR45 PSP24|PSP24(ALPHA)|PSP24A G protein-coupled receptor 45 protein-coding chr4-20 chr4 18021949 18022193 + 38.4 0.000 promoter-TSS (NM_001365658) promoter-TSS (NM_001365658) -196 NM_001365660 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr7-224 chr7 44573927 44574171 + 38.4 0.000 5' UTR (NM_001257189, exon 1 of 13) 5' UTR (NM_001257189, exon 1 of 13) 489 NM_019082 54606 Hs.654762 NM_019082 ENSG00000136271 DDX56 DDX21|DDX26|NOH61 DEAD-box helicase 56 protein-coding chr17-126 chr17 41777580 41777824 + 38.4 0.000 intron (NM_001352776, intron 1 of 15) (AGGCTG)n|Simple_repeat|Simple_repeat 8393 NM_001352777 3728 Hs.514174 NM_002230 ENSG00000173801 JUP CTNNG|DP3|DPIII|PDGB|PKGB junction plakoglobin protein-coding chr14-91 chr14 104973354 104973598 + 38.4 0.000 intron (NM_138420, intron 1 of 6) intron (NM_138420, intron 1 of 6) -2969 NM_001350929 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr2-262 chr2 236642734 236642978 + 38.4 0.000 Intergenic Intergenic 73031 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr3-61 chr3 141738111 141738355 + 38.4 0.000 promoter-TSS (NM_014245) promoter-TSS (NM_014245) 24 NM_183237 9616 Hs.134623 NM_014245 ENSG00000114125 RNF7 CKBBP1|ROC2|SAG|rbx2 ring finger protein 7 protein-coding chr20-45 chr20 49046221 49046465 + 38.4 0.000 promoter-TSS (NM_001256135) promoter-TSS (NM_001256135) 31 NM_001362762 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding chr9-209 chr9 92293600 92293844 + 38.4 0.000 promoter-TSS (NM_002161) promoter-TSS (NM_002161) 34 NR_073446 3376 Hs.445403 NM_002161 ENSG00000196305 IARS GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 isoleucyl-tRNA synthetase protein-coding chr19-387 chr19 18001127 18001371 + 38.4 0.000 5' UTR (NM_001025604, exon 1 of 8) 5' UTR (NM_001025604, exon 1 of 8) 125 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr1-650 chr1 98384510 98384754 + 38.4 0.000 Intergenic Intergenic 173921 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr1-195 chr1 231691651 231691895 + 38.4 0.000 intron (NM_001164556, intron 1 of 4) intron (NM_001164556, intron 1 of 4) 64958 NM_001164556 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr17-216 chr17 75060100 75060344 + 38.4 0.000 intron (NM_015353, intron 4 of 5) intron (NM_015353, intron 4 of 5) 12997 NM_015353 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr1-398 chr1 212857928 212858172 + 38.3 0.000 promoter-TSS (NR_027285) promoter-TSS (NR_027285) 88 NR_027285 642946 Hs.552649 NR_027285 ENSG00000198468 FLVCR1-DT FLVCR1-AS1|LQK1|NCRNA00292 FLVCR1 divergent transcript ncRNA chr11-234 chr11 35491579 35491823 + 38.3 0.000 intron (NM_015430, intron 3 of 11) intron (NM_015430, intron 3 of 11) 33915 NM_015430 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr16-91 chr16 69311097 69311341 + 38.3 0.000 promoter-TSS (NM_013245) promoter-TSS (NM_013245) -131 NM_013245 27183 Hs.128420 NM_013245 ENSG00000132612 VPS4A SKD1|SKD1A|SKD2|VPS4|VPS4-1 vacuolar protein sorting 4 homolog A protein-coding chr11-219 chr11 67043973 67044217 + 38.3 0.000 intron (NM_001318775, intron 4 of 6) intron (NM_001318775, intron 4 of 6) -1548 NR_106920 102465518 NR_106920 ENSG00000283326 MIR6860 hsa-mir-6860 microRNA 6860 ncRNA chr12-128 chr12 98418688 98418932 + 38.3 0.000 Intergenic Intergenic 38335 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr4-136 chr4 152536114 152536358 + 38.3 0.000 promoter-TSS (NM_001257069) promoter-TSS (NM_001257069) -28 NR_033797 54553 Hs.142307 NR_033797 ENSG00000268471 MIR4453HG DKFZP434I0714|LINC02486 MIR4453 host gene ncRNA chr10-60 chr10 103368568 103368812 + 38.3 0.000 intron (NM_139052, intron 1 of 9) CpG 714 NM_139052 6877 Hs.96103 NM_006951 ENSG00000148835 TAF5 TAF(II)100|TAF2D|TAFII-100|TAFII100 TATA-box binding protein associated factor 5 protein-coding chr3-111 chr3 125990361 125990605 + 38.3 0.000 Intergenic CpG 21305 NM_001012337 152015 Hs.663128 NM_001012337 ENSG00000114547 ROPN1B - rhophilin associated tail protein 1B protein-coding chr11-494 chr11 12704202 12704446 + 38.3 0.000 intron (NM_021961, intron 2 of 12) intron (NM_021961, intron 2 of 12) 29903 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chrX-63 chrX 74008370 74008614 + 38.1 0.000 intron (NR_024582, intron 3 of 4) L1M4b|LINE|L1 64168 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr17-232 chr17 64145854 64146098 + 38.1 0.000 promoter-TSS (NR_132278) promoter-TSS (NR_132278) 6 NR_132278 105376843 Hs.405444 NR_132278 ENSG00000266402 SNHG25 - small nucleolar RNA host gene 25 ncRNA chr5-219 chr5 172766657 172766901 + 38.1 0.000 Intergenic Intergenic 4416 NM_004417 1843 Hs.171695 NM_004417 ENSG00000120129 DUSP1 CL100|HVH1|MKP-1|MKP1|PTPN10 dual specificity phosphatase 1 protein-coding chr19-216 chr19 23687007 23687251 + 38.1 0.000 promoter-TSS (NM_138330) promoter-TSS (NM_138330) 83 NM_138330 171392 Hs.264345 NM_138330 ENSG00000197372 ZNF675 TBZF|TIZ zinc finger protein 675 protein-coding chr12-87 chr12 88035532 88035776 + 38.1 0.000 exon (NM_001009894, exon 1 of 7) exon (NM_001009894, exon 1 of 7) 118 NM_001009894 91298 Hs.591009 NM_001009894 ENSG00000133641 C12orf29 - chromosome 12 open reading frame 29 protein-coding chr2-393 chr2 53632716 53632960 + 38.1 0.000 Intergenic Intergenic -134945 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr19-291 chr19 45423631 45423875 + 38.1 0.000 promoter-TSS (NM_001369419) promoter-TSS (NM_001369419) 164 NM_001166049 2067 Hs.435981 NM_001983 ENSG00000012061 ERCC1 COFS4|RAD10|UV20 ERCC excision repair 1, endonuclease non-catalytic subunit protein-coding chr1-288 chr1 2290958 2291202 + 38.1 0.000 intron (NM_003036, intron 1 of 6) CpG 61581 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr13-121 chr13 98557188 98557432 + 38.1 0.000 intron (NM_001032296, intron 1 of 10) L2c|LINE|L2 19841 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr2-142 chr2 28894509 28894753 + 38.1 0.000 promoter-TSS (NM_015131) promoter-TSS (NM_015131) -36 NM_015131 23160 Hs.622982 NM_015131 ENSG00000163811 WDR43 NET12|UTP5 WD repeat domain 43 protein-coding chr14-92 chr14 54773198 54773442 + 38.1 0.000 intron (NM_015589, intron 8 of 11) intron (NM_015589, intron 8 of 11) 18487 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr19-467 chr19 44259775 44260019 + 38.1 0.000 promoter-TSS (NM_001330529) promoter-TSS (NM_001330529) 17 NM_001207005 353355 Hs.466891 NM_181756 ENSG00000159915 ZNF233 - zinc finger protein 233 protein-coding chr15-22 chr15 58770981 58771225 + 38.1 0.000 promoter-TSS (NR_135474) promoter-TSS (NR_135474) -129 NR_135474 101928725 Hs.572321 NR_135474 ENSG00000245975 LOC101928725 - uncharacterized LOC101928725 ncRNA chr10-242 chr10 35421722 35421966 + 38.1 0.000 intron (NM_001282853, intron 2 of 10) intron (NM_001282853, intron 2 of 10) 84970 NM_001282852 219771 Hs.14745 NM_145012 ENSG00000108100 CCNY C10orf9|CBCP1|CCNX|CFP1 cyclin Y protein-coding chr4-133 chr4 108361211 108361455 + 38.1 0.000 Intergenic Intergenic 189213 NR_029373 641518 Hs.535760 NR_029373 ENSG00000232021 LEF1-AS1 LEF1NAT LEF1 antisense RNA 1 ncRNA chr19-324 chr19 45730793 45731037 + 38.1 0.000 promoter-TSS (NM_001080469) promoter-TSS (NM_001080469) -19 NM_001080469 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr11-221 chr11 119417627 119417871 + 38.0 0.000 TTS (NM_001311162) TTS (NM_001311162) 4813 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr8-122 chr8 134778242 134778486 + 38.0 0.000 Intergenic Intergenic 22243 NR_029666 407030 NR_029666 ENSG00000207582 MIR30B MIRN30B|mir-30b microRNA 30b ncRNA chr7-201 chr7 2354217 2354461 + 38.0 0.000 promoter-TSS (NM_001362791) promoter-TSS (NM_001362791) 253 NM_001362793 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr3-414 chr3 140529177 140529421 + 38.0 0.000 intron (NM_022131, intron 8 of 16) intron (NM_022131, intron 8 of 16) -20510 NR_108084 101927808 Hs.581236 NR_108084 ENSG00000250433 CLSTN2-AS1 - CLSTN2 antisense RNA 1 ncRNA chr19-202 chr19 10568836 10569080 + 38.0 0.000 promoter-TSS (NM_079421) promoter-TSS (NM_079421) 21 NM_001800 1032 Hs.435051 NM_001800 ENSG00000129355 CDKN2D INK4D|p19|p19-INK4D cyclin dependent kinase inhibitor 2D protein-coding chr6-118 chr6 106870045 106870289 + 38.0 0.000 Intergenic L3|LINE|CR1 -82626 NR_147987 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA chr10-66 chr10 97498435 97498679 + 38.0 0.000 promoter-TSS (NM_001289404) promoter-TSS (NM_001289404) 52 NM_001330128 64210 Hs.500721 NM_022362 ENSG00000155229 MMS19 CIAO4|MET18|MMS19L|hMMS19 MMS19 homolog, cytosolic iron-sulfur assembly component protein-coding chr3-239 chr3 158709689 158709933 + 38.0 0.000 intron (NM_206963, intron 3 of 5) intron (NM_206963, intron 3 of 5) 22646 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr11-140 chr11 63838794 63839038 + 38.0 0.000 promoter-TSS (NM_001163297) promoter-TSS (NM_001163297) -12 NM_001039469 2011 Hs.567261 NM_004954 ENSG00000072518 MARK2 EMK-1|EMK1|PAR-1|Par-1b|Par1b microtubule affinity regulating kinase 2 protein-coding chr16-285 chr16 235474 235718 + 38.0 0.000 intron (NM_032039, intron 1 of 12) intron (NM_032039, intron 1 of 12) 775 NM_032039 83986 Hs.513225 NM_032039 ENSG00000167930 FAM234A C16orf9|ITFG3|gs19 family with sequence similarity 234 member A protein-coding chr1-130 chr1 222617642 222617886 + 38.0 0.000 promoter-TSS (NM_001324062) promoter-TSS (NM_001324062) -333 NM_198551 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr18-21 chr18 11980926 11981170 + 38.0 0.000 promoter-TSS (NM_014214) promoter-TSS (NM_014214) -459 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr8-18 chr8 98825953 98826197 + 38.0 0.000 promoter-TSS (NM_001256313) promoter-TSS (NM_001256313) -387 NM_006281 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding chr16-79 chr16 30527157 30527401 + 38.0 0.000 promoter-TSS (NM_024671) promoter-TSS (NM_024671) -713 NM_024671 79724 Hs.85658 NM_024671 ENSG00000169957 ZNF768 - zinc finger protein 768 protein-coding chr7-139 chr7 99919533 99919777 + 38.0 0.000 promoter-TSS (NM_033017) promoter-TSS (NM_033017) -125 NM_033091 89122 Hs.50749 NM_033017 ENSG00000146833 TRIM4 RNF87 tripartite motif containing 4 protein-coding chr2-277 chr2 216373647 216373891 + 37.8 0.000 Intergenic Intergenic -1286 NM_020814 57574 Hs.170388 NM_020814 ENSG00000144583 MARCH4 MARCH-IV|RNF174 membrane associated ring-CH-type finger 4 protein-coding chr17-253 chr17 80984726 80984970 + 37.8 0.000 Intergenic Intergenic -6993 NM_024591 79643 Hs.514560 NM_024591 ENSG00000176108 CHMP6 VPS20 charged multivesicular body protein 6 protein-coding chr3-27 chr3 155870350 155870594 + 37.8 0.000 promoter-TSS (NM_003875) promoter-TSS (NM_003875) -178 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr2-598 chr2 36376465 36376709 + 37.8 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 20809 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr16-109 chr16 23678613 23678857 + 37.8 0.000 promoter-TSS (NM_005030) promoter-TSS (NM_005030) -154 NM_005030 5347 Hs.592049 NM_005030 ENSG00000166851 PLK1 PLK|STPK13 polo like kinase 1 protein-coding chr16-159 chr16 87493039 87493283 + 37.8 0.000 Intergenic CpG-10077 -1026 NR_110943 101928737 Hs.579009 NR_110943 ENSG00000260750 LOC101928737 - uncharacterized LOC101928737 ncRNA chr17-364 chr17 82239575 82239819 + 37.8 0.000 TTS (NM_001206952) TTS (NM_001206952) 3029 NR_106845 102465472 NR_106845 ENSG00000284574 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA chr1-96 chr1 42958920 42959164 + 37.8 0.000 promoter-TSS (NR_033967) promoter-TSS (NR_033967) -7 NR_033967 440584 Hs.260928 NR_033967 ENSG00000227533 SLC2A1-AS1 - SLC2A1 antisense RNA 1 ncRNA chrX-28 chrX 103686794 103687038 + 37.8 0.000 promoter-TSS (NM_001142429) promoter-TSS (NM_001142429) -98 NM_001142426 9643 Hs.326387 NM_012286 ENSG00000123562 MORF4L2 MORFL2|MRGX mortality factor 4 like 2 protein-coding chr11-321 chr11 113553359 113553603 + 37.8 0.000 Intergenic MIRb|SINE|MIR -78083 NM_000795 1813 Hs.73893 NM_000795 ENSG00000149295 DRD2 D2DR|D2R dopamine receptor D2 protein-coding chr1-236 chr1 70410988 70411232 + 37.8 0.000 promoter-TSS (NM_153742) promoter-TSS (NM_153742) -108 NM_153742 1491 Hs.19904 NM_001902 ENSG00000116761 CTH - cystathionine gamma-lyase protein-coding chr4-202 chr4 23728475 23728719 + 37.8 0.000 Intergenic Intergenic 152695 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr7-163 chr7 38178075 38178319 + 37.8 0.000 promoter-TSS (NM_001363345) promoter-TSS (NM_001363345) -48 NM_001363340 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr11-377 chr11 125772806 125773050 + 37.8 0.000 Intergenic Intergenic 5900 NM_212555 399967 Hs.369185 NM_212555 ENSG00000196844 PATE2 C11orf38|PATE-M|UNQ3112 prostate and testis expressed 2 protein-coding chr9-284 chr9 134592362 134592606 + 37.8 0.000 Intergenic Intergenic -49321 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr15-208 chr15 83112597 83112841 + 37.8 0.000 intron (NM_001353883, intron 1 of 7) intron (NM_001353883, intron 1 of 7) 5074 NM_023003 53346 Hs.513094 NM_023003 ENSG00000136404 TM6SF1 - transmembrane 6 superfamily member 1 protein-coding chr14-110 chr14 20469327 20469571 + 37.8 0.000 promoter-TSS (NM_000270) promoter-TSS (NM_000270) 70 NM_000270 4860 Hs.75514 NM_000270 ENSG00000198805 PNP NP|PRO1837|PUNP purine nucleoside phosphorylase protein-coding chr11-288 chr11 121810369 121810613 + 37.6 0.000 Intergenic Intergenic 289353 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr9-126 chr9 122828387 122828631 + 37.6 0.000 promoter-TSS (NM_005388) promoter-TSS (NM_005388) 79 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr8-232 chr8 66219722 66219966 + 37.6 0.000 Intergenic Intergenic 27730 NR_039979 100505659 Hs.529729 NR_039979 ENSG00000253138 LINC00967 - long intergenic non-protein coding RNA 967 ncRNA chr6-139 chr6 26351641 26351885 + 37.6 0.000 Intergenic MER44D|DNA|TcMar-Tigger -13396 NM_001197248 11118 Hs.376046 NM_007047 ENSG00000186470 BTN3A2 BT3.2|BTF4|BTN3.2|CD277 butyrophilin subfamily 3 member A2 protein-coding chr4-69 chr4 88823222 88823466 + 37.6 0.000 promoter-TSS (NM_001265580) promoter-TSS (NM_001265580) 17 NM_001015045 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr16-247 chr16 83305180 83305424 + 37.6 0.000 intron (NM_001220489, intron 4 of 12) intron (NM_001220489, intron 4 of 12) -203044 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA chr22-128 chr22 20320231 20320475 + 37.6 0.000 promoter-TSS (NM_033257) promoter-TSS (NM_033257) -293 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr10-201 chr10 63629612 63629856 + 37.6 0.000 Intergenic Intergenic -107844 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr22-53 chr22 50525703 50525947 + 37.6 0.000 promoter-TSS (NM_001169111) promoter-TSS (NM_001169111) -220 NM_005138 9997 Hs.180903 NM_005138 ENSG00000130489 SCO2 CEMCOX1|ECGF1|Gliostatin|MYP6|PD-ECGF|SCO1L|TP|TYMP|TdRPase SCO cytochrome c oxidase assembly protein 2 protein-coding chr5-200 chr5 9947474 9947718 + 37.6 0.000 Intergenic Intergenic -43772 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr20-99 chr20 40868938 40869182 + 37.6 0.000 Intergenic Intergenic -111653 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr2-105 chr2 222291131 222291375 + 37.5 0.000 intron (NM_181457, intron 4 of 7) CpG -6894 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr11-532 chr11 102047363 102047607 + 37.5 0.000 promoter-TSS (NM_001363505) promoter-TSS (NM_001363505) 47 NM_001363505 85016 Hs.98328 NM_032930 ENSG00000137691 CFAP300 C11orf70|CILD38 cilia and flagella associated protein 300 protein-coding chr8-105 chr8 22440956 22441200 + 37.5 0.000 5' UTR (NM_001243975, exon 1 of 13) 5' UTR (NM_001243975, exon 1 of 13) 108 NM_001243974 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr16-75 chr16 1826729 1826973 + 37.5 0.000 promoter-TSS (NM_031208) promoter-TSS (NM_031208) -26 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr4-201 chr4 13980406 13980650 + 37.5 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger -131440 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr5-21 chr5 103258459 103258703 + 37.5 0.000 promoter-TSS (NM_001316969) promoter-TSS (NM_001316969) -182 NM_033211 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr7-557 chr7 29723234 29723478 + 37.5 0.000 intron (NR_158194, intron 5 of 8) intron (NR_158194, intron 5 of 8) -37535 NR_027347 100271874 Hs.729709 NR_027347 ZNRF2P2 - zinc and ring finger 2 pseudogene 2 pseudo chr11-213 chr11 61297913 61298157 + 37.5 0.000 Intergenic MER134|DNA?|DNA? -2719 NM_152718 220001 Hs.60640 NM_152718 ENSG00000167992 VWCE URG11|VWC1 von Willebrand factor C and EGF domains protein-coding chr13-24 chr13 30870427 30870671 + 37.5 0.000 Intergenic Intergenic -12013 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr10-156 chr10 101588040 101588284 + 37.5 0.000 promoter-TSS (NM_001329743) promoter-TSS (NM_001329743) 95 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding chr1-224 chr1 16367169 16367413 + 37.5 0.000 promoter-TSS (NM_001271869) promoter-TSS (NM_001271869) 49 NM_001114600 26099 Hs.252967 NM_001114600 ENSG00000055070 SZRD1 C1orf144 SUZ RNA binding domain containing 1 protein-coding chr1-391 chr1 150550709 150550953 + 37.5 0.000 intron (NM_001288608, intron 2 of 19) intron (NM_001288608, intron 2 of 19) -1098 NR_036211 100422997 NR_036211 ENSG00000264553 MIR4257 - microRNA 4257 ncRNA chr6-107 chr6 160088545 160088789 + 37.5 0.000 intron (NM_000876, intron 42 of 47) intron (NM_000876, intron 42 of 47) -4415 NR_003288 729603 Hs.674810 NR_003288 ENSG00000213073 LOC729603 - calcineurin like EF-hand protein 1 pseudogene pseudo chr1-166 chr1 36306856 36307100 + 37.5 0.000 promoter-TSS (NM_024676) promoter-TSS (NM_024676) -129 NM_024676 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr12-129 chr12 104596185 104596429 + 37.5 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 4674 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr3-164 chr3 195494567 195494811 + 37.5 0.000 Intergenic Intergenic 48636 NM_001291504 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr11-139 chr11 117209433 117209677 + 37.5 0.000 intron (NM_004716, intron 12 of 16) L2b|LINE|L2 -7641 NR_045215 100652768 Hs.732365 NR_045215 LOC100652768 - uncharacterized LOC100652768 ncRNA chr20-109 chr20 2237191 2237435 + 37.5 0.000 Intergenic Intergenic 30385 NR_161305 388780 Hs.132163 NR_161305 LOC388780 - uncharacterized LOC388780 ncRNA chr3-329 chr3 23916804 23917048 + 37.3 0.000 promoter-TSS (NM_001253383) promoter-TSS (NM_001253383) 120 NM_020345 28512 Hs.173202 NM_020345 ENSG00000197885 NKIRAS1 KBRAS1|kappaB-Ras1 NFKB inhibitor interacting Ras like 1 protein-coding chr6-126 chr6 46652851 46653095 + 37.3 0.000 promoter-TSS (NM_004277) promoter-TSS (NM_004277) -2 NM_001204051 9481 Hs.40510 NM_004277 ENSG00000153291 SLC25A27 UCP4 solute carrier family 25 member 27 protein-coding chr11-229 chr11 85719138 85719382 + 37.3 0.000 promoter-TSS (NM_001365834) promoter-TSS (NM_001365834) -80 NM_206929 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr7-151 chr7 100889873 100890117 + 37.3 0.000 promoter-TSS (NM_001015072) promoter-TSS (NM_001015072) -280 NM_001015072 402682 Hs.534845 NM_001015072 ENSG00000176125 UFSP1 UFSP UFM1 specific peptidase 1 (inactive) protein-coding chr9-74 chr9 95510857 95511101 + 37.3 0.000 intron (NM_001083603, intron 1 of 23) CpG-28534 -2430 NM_001354918 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr12-75 chr12 114684169 114684413 + 37.3 0.000 promoter-TSS (NM_005996) promoter-TSS (NM_005996) -116 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chrX-19 chrX 15335461 15335705 + 37.3 0.000 promoter-TSS (NM_002641) promoter-TSS (NM_002641) -29 NR_033836 5277 Hs.137154 NM_002641 ENSG00000165195 PIGA GPI3|MCAHS2|PIG-A|PNH1 phosphatidylinositol glycan anchor biosynthesis class A protein-coding chr1-265 chr1 208219793 208220037 + 37.3 0.000 intron (NM_025179, intron 1 of 31) intron (NM_025179, intron 1 of 31) 24469 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr10-34 chr10 73414026 73414270 + 37.3 0.000 promoter-TSS (NM_001320880) promoter-TSS (NM_001320880) -90 NM_001320880 310 Hs.631827 NM_001156 ENSG00000138279 ANXA7 ANX7|SNX|SYNEXIN annexin A7 protein-coding chr2-175 chr2 97645851 97646095 + 37.2 0.000 promoter-TSS (NM_001862) promoter-TSS (NM_001862) -89 NM_001862 1329 Hs.1342 NM_001862 ENSG00000135940 COX5B COXVB cytochrome c oxidase subunit 5B protein-coding chr9-253 chr9 123131222 123131466 + 37.2 0.000 intron (NR_033234, intron 17 of 18) L2c|LINE|L2 -15867 NR_026677 81571 Hs.708072 NM_030814 ENSG00000236901 MIR600HG C9orf45|GL012|NCRNA00287 MIR600 host gene ncRNA chr9-150 chr9 75028310 75028554 + 37.2 0.000 promoter-TSS (NM_152420) promoter-TSS (NM_152420) -2 NR_135282 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr2-311 chr2 24793122 24793366 + 37.2 0.000 promoter-TSS (NR_136184) promoter-TSS (NR_136184) 129 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr10-170 chr10 97539741 97539985 + 37.2 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -32578 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr1-301 chr1 223846133 223846377 + 37.2 0.000 promoter-TSS (NM_001031685) promoter-TSS (NM_001031685) -283 NM_005426 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding chr1-359 chr1 153627295 153627539 + 37.2 0.000 promoter-TSS (NM_001024213) promoter-TSS (NM_001024213) -149 NM_001024212 6284 Hs.516505 NM_005979 ENSG00000189171 S100A13 - S100 calcium binding protein A13 protein-coding chr1-201 chr1 32964799 32965043 + 37.2 0.000 promoter-TSS (NM_001127361) promoter-TSS (NM_001127361) -112 NM_153341 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr7-373 chr7 16668045 16668289 + 37.2 0.000 intron (NM_001362717, intron 2 of 11) intron (NM_001362717, intron 2 of 11) 6953 NM_001362719 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding chr16-80 chr16 30658510 30658754 + 37.2 0.000 5' UTR (NM_001105079, exon 1 of 18) 5' UTR (NM_001105079, exon 1 of 18) 201 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding chr9-207 chr9 35161962 35162206 + 37.2 0.000 promoter-TSS (NM_001371186) promoter-TSS (NM_001371186) 75 NM_001330653 10497 Hs.493791 NM_006377 ENSG00000198722 UNC13B MUNC13|UNC13|Unc13h2 unc-13 homolog B protein-coding chr6-337 chr6 163529718 163529962 + 37.0 0.000 intron (NM_206853, intron 3 of 6) intron (NM_206853, intron 3 of 6) 115122 NM_206854 9444 Hs.510324 NM_006775 ENSG00000112531 QKI Hqk|QK|QK1|QK3|hqkI QKI, KH domain containing RNA binding protein-coding chr3-99 chr3 32685106 32685350 + 37.0 0.000 promoter-TSS (NM_015442) promoter-TSS (NM_015442) 40 NM_001256741 25904 Hs.444851 NM_015442 ENSG00000182973 CNOT10 - CCR4-NOT transcription complex subunit 10 protein-coding chr10-87 chr10 25016412 25016656 + 37.0 0.000 promoter-TSS (NR_072992) promoter-TSS (NR_072992) -78 NM_024838 79896 Hs.645274 NM_024838 ENSG00000185875 THNSL1 TSH1 threonine synthase like 1 protein-coding chr4-158 chr4 139184214 139184458 + 37.0 0.000 Intergenic MIR|SINE|MIR -7118 NM_001371338 chr8-79 chr8 94895137 94895381 + 37.0 0.000 promoter-TSS (NM_001354516) promoter-TSS (NM_001354516) -5 NM_057749 9134 Hs.521693 NM_004702 ENSG00000175305 CCNE2 CYCE2 cyclin E2 protein-coding chr8-44 chr8 106657575 106657819 + 37.0 0.000 promoter-TSS (NM_181354) promoter-TSS (NM_181354) -111 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr12-231 chr12 110039050 110039294 + 37.0 0.000 3' UTR (NM_033121, exon 15 of 15) 3' UTR (NM_033121, exon 15 of 15) 9475 NR_148516 400073 Hs.44817 NM_207435 ENSG00000174456 C12orf76 - chromosome 12 open reading frame 76 protein-coding chr10-208 chr10 124063914 124064158 + 37.0 0.000 intron (NM_001270765, intron 1 of 5) intron (NM_001270765, intron 1 of 5) 28370 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr21-17 chr21 46458638 46458882 + 37.0 0.000 promoter-TSS (NM_206890) promoter-TSS (NM_206890) -131 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr6-291 chr6 127464187 127464431 + 37.0 0.000 intron (NM_001012279, intron 7 of 11) MER5B|DNA|hAT-Charlie -4920 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr13-59 chr13 75549333 75549577 + 37.0 0.000 promoter-TSS (NM_001287394) promoter-TSS (NM_001287394) -16 NM_001287394 170622 Hs.508266 NM_203495 ENSG00000188243 COMMD6 Acrg COMM domain containing 6 protein-coding chr6-182 chr6 148342574 148342818 + 37.0 0.000 promoter-TSS (NM_015278) promoter-TSS (NM_015278) -142 NM_001346506 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr7-205 chr7 66493516 66493760 + 37.0 0.000 promoter-TSS (NR_134573) promoter-TSS (NR_134573) 6 NR_134573 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr14-117 chr14 23555992 23556236 + 37.0 0.000 promoter-TSS (NM_024328) promoter-TSS (NM_024328) 132 NM_001126339 79178 Hs.655179 NM_024328 ENSG00000259431 THTPA THTP|THTPASE thiamine triphosphatase protein-coding chr19-399 chr19 40465715 40465959 + 36.9 0.000 promoter-TSS (NM_000713) promoter-TSS (NM_000713) -92 NM_000713 645 Hs.515785 NM_000713 ENSG00000090013 BLVRB BVRB|FLR|HEL-S-10|SDR43U1 biliverdin reductase B protein-coding chr10-210 chr10 126421915 126422159 + 36.9 0.000 promoter-TSS (NR_073453) promoter-TSS (NR_073453) -158 NR_073453 101101772 Hs.562258 NR_073453 ENSG00000235180 LINC00601 - long intergenic non-protein coding RNA 601 ncRNA chr12-79 chr12 7018588 7018832 + 36.9 0.000 promoter-TSS (NM_005768) promoter-TSS (NM_005768) -234 NM_005768 10162 Hs.655248 NM_005768 ENSG00000111684 LPCAT3 C3F|LPCAT|LPLAT 5|LPSAT|MBOAT5|OACT5|nessy lysophosphatidylcholine acyltransferase 3 protein-coding chr19-320 chr19 35740345 35740589 + 36.9 0.000 exon (NM_001346006, exon 3 of 5) exon (NM_001346006, exon 3 of 5) 1985 NM_001346004 79713 Hs.352548 NM_024660 ENSG00000126246 IGFLR1 TMEM149 IGF like family receptor 1 protein-coding chr15-51 chr15 45402189 45402433 + 36.9 0.000 promoter-TSS (NM_001321015) promoter-TSS (NM_001321015) -10 NM_001323640 79029 Hs.369657 NM_024063 ENSG00000171763 SPATA5L1 - spermatogenesis associated 5 like 1 protein-coding chr17-148 chr17 58219276 58219520 + 36.9 0.000 promoter-TSS (NM_001330397) promoter-TSS (NM_001330397) -93 NM_017777 54903 Hs.408843 NM_017777 ENSG00000011143 MKS1 BBS13|JBTS28|MES|MKS|POC12 MKS transition zone complex subunit 1 protein-coding chr19-328 chr19 1241642 1241886 + 36.9 0.000 promoter-TSS (NM_001687) promoter-TSS (NM_001687) 13 NM_001001975 513 Hs.418668 NM_001687 ENSG00000099624 ATP5F1D ATP5D|MC5DN5 ATP synthase F1 subunit delta protein-coding chr14-78 chr14 69766888 69767132 + 36.9 0.000 promoter-TSS (NM_006925) promoter-TSS (NM_006925) -132 NM_001320214 6430 Hs.632326 NM_006925 ENSG00000100650 SRSF5 HRS|SFRS5|SRP40 serine and arginine rich splicing factor 5 protein-coding chr6-53 chr6 71489788 71490032 + 36.9 0.000 Intergenic Intergenic 68883 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr2-335 chr2 38720862 38721106 + 36.7 0.000 intron (NM_138801, intron 4 of 6) MLT1G3|LTR|ERVL-MaLR 30377 NM_001031684 6432 Hs.309090 NM_006276 ENSG00000115875 SRSF7 9G8|AAG3|SFRS7 serine and arginine rich splicing factor 7 protein-coding chr11-209 chr11 75499495 75499739 + 36.7 0.000 intron (NM_030792, intron 1 of 16) intron (NM_030792, intron 1 of 16) 25956 NM_001351168 81544 Hs.503297 NM_030792 ENSG00000158555 GDPD5 GDE2|PP1665 glycerophosphodiester phosphodiesterase domain containing 5 protein-coding chr16-210 chr16 53080649 53080893 + 36.7 0.000 intron (NM_025134, intron 1 of 38) intron (NM_025134, intron 1 of 38) 25780 NM_025134 80205 Hs.59159 NM_015287 ENSG00000177200 CHD9 AD013|CHD-9|CReMM|KISH2|PRIC320 chromodomain helicase DNA binding protein 9 protein-coding chr2-173 chr2 68467273 68467517 + 36.7 0.000 promoter-TSS (NM_173545) promoter-TSS (NM_173545) -101 NM_001024680 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding chr15-118 chr15 69414886 69415130 + 36.7 0.000 promoter-TSS (NR_132970) promoter-TSS (NR_132970) 21 NR_132971 145694 Hs.147229 NR_132969 ENSG00000259426 LOC145694 - uncharacterized LOC145694 ncRNA chr1-133 chr1 36385927 36386171 + 36.7 0.000 promoter-TSS (NM_001282547) promoter-TSS (NM_001282547) -125 NM_001282547 83931 Hs.471768 NM_032017 ENSG00000196182 STK40 SHIK|SgK495 serine/threonine kinase 40 protein-coding chr5-299 chr5 154221536 154221780 + 36.7 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 30925 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr13-76 chr13 75482352 75482596 + 36.7 0.000 promoter-TSS (NM_014832) promoter-TSS (NM_014832) -305 NM_014832 9882 Hs.210891 NM_014832 ENSG00000136111 TBC1D4 AS160|NIDDM5 TBC1 domain family member 4 protein-coding chr3-268 chr3 29280729 29280973 + 36.7 0.000 promoter-TSS (NM_014483) promoter-TSS (NM_014483) 88 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr2-122 chr2 207258586 207258830 + 36.7 0.000 Intergenic Intergenic -1737 NR_146973 105373852 Hs.516721 NR_146973 LINC01802 - long intergenic non-protein coding RNA 1802 ncRNA chr19-219 chr19 57411081 57411325 + 36.7 0.000 promoter-TSS (NM_006959) promoter-TSS (NM_006959) 42 NM_006959 7565 Hs.729403 NM_006959 ENSG00000186272 ZNF17 HPF3|KOX10 zinc finger protein 17 protein-coding chr1-354 chr1 59151109 59151353 + 36.7 0.000 Intergenic Intergenic -4424 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr4-209 chr4 80238056 80238300 + 36.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger -28410 NM_004464 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr3-153 chr3 195270974 195271218 + 36.6 0.000 promoter-TSS (NM_152531) promoter-TSS (NM_152531) 63 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr1-254 chr1 27234305 27234549 + 36.6 0.000 promoter-TSS (NM_015023) promoter-TSS (NM_015023) -205 NM_001276252 23038 Hs.469154 NM_015023 ENSG00000142784 WDTC1 ADP|DCAF9 WD and tetratricopeptide repeats 1 protein-coding chr19-263 chr19 14476903 14477147 + 36.6 0.000 TTS (NM_202468) TTS (NM_202468) -1671 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr20-92 chr20 25136719 25136963 + 36.6 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 11152 NR_027093 284798 Hs.334934 NR_027091 ENSG00000230725 LOC284798 - uncharacterized LOC284798 ncRNA chr1-337 chr1 151190013 151190257 + 36.6 0.000 promoter-TSS (NM_001271088) promoter-TSS (NM_001271088) 62 NM_001271088 6944 Hs.2430 NM_005997 ENSG00000163159 VPS72 CFL1|Swc2|TCFL1|YL-1|YL1 vacuolar protein sorting 72 homolog protein-coding chr11-162 chr11 68010232 68010476 + 36.6 0.000 promoter-TSS (NM_000694) promoter-TSS (NM_000694) 27 NM_001290059 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr17-187 chr17 29158558 29158802 + 36.6 0.000 intron (NM_001346765, intron 2 of 42) intron (NM_001346765, intron 2 of 42) 18093 NM_001346767 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr2-389 chr2 37231533 37231777 + 36.6 0.000 promoter-TSS (NM_144736) promoter-TSS (NM_144736) -3 NM_001350024 55471 Hs.433466 NM_018607 ENSG00000003509 NDUFAF7 C2orf56|MidA|PRO1853 NADH:ubiquinone oxidoreductase complex assembly factor 7 protein-coding chr9-276 chr9 111958134 111958378 + 36.6 0.000 Intergenic LTR91|LTR|ERVL 26156 NR_039814 100616114 NR_039814 ENSG00000266315 MIR4668 mir-4668 microRNA 4668 ncRNA chr1-396 chr1 198937312 198937556 + 36.6 0.000 promoter-TSS (NR_040073) promoter-TSS (NR_040073) -5 NR_040073 100131234 Hs.711077 NR_040073 MIR181A1HG - MIR181A1 host gene ncRNA chr2-181 chr2 219543687 219543931 + 36.6 0.000 promoter-TSS (NM_001195731) promoter-TSS (NM_001195731) 0 NM_024536 79586 Hs.516711 NM_024536 ENSG00000123989 CHPF CHSY2|CSS2 chondroitin polymerizing factor protein-coding chr1-113 chr1 109667895 109668139 + 36.6 0.000 promoter-TSS (NM_001142368) promoter-TSS (NM_001142368) -5 NM_001142368 2946 Hs.279837 NM_000848 ENSG00000213366 GSTM2 GST4|GSTM|GSTM2-2|GTHMUS glutathione S-transferase mu 2 protein-coding chr17-218 chr17 76353933 76354177 + 36.6 0.000 promoter-TSS (NM_002766) promoter-TSS (NM_002766) -139 NM_002766 5635 Hs.77498 NM_002766 ENSG00000161542 PRPSAP1 PAP39 phosphoribosyl pyrophosphate synthetase associated protein 1 protein-coding chr13-124 chr13 102192124 102192368 + 36.6 0.000 intron (NM_175929, intron 1 of 4) MLT1A-int|LTR|ERVL-MaLR 118440 NM_001321931 2259 Hs.508616 NM_004115 ENSG00000102466 FGF14 FGF-14|FHF-4|FHF4|SCA27 fibroblast growth factor 14 protein-coding chr10-47 chr10 97687326 97687570 + 36.6 0.000 promoter-TSS (NM_021732) promoter-TSS (NM_021732) -207 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr18-4 chr18 32092398 32092642 + 36.4 0.000 promoter-TSS (NM_198128) promoter-TSS (NM_198128) -86 NM_001191324 51444 Hs.302408 NM_016271 ENSG00000134758 RNF138 HSD-4|NARF|STRIN|hNARF ring finger protein 138 protein-coding chr1-321 chr1 203316758 203317002 + 36.4 0.000 Intergenic Intergenic 11361 NM_006763 7832 Hs.519162 NM_006763 ENSG00000159388 BTG2 APRO1|PC3|TIS21 BTG anti-proliferation factor 2 protein-coding chr4-159 chr4 161936730 161936974 + 36.4 0.000 intron (NM_001128428, intron 3 of 14) HAL1|LINE|L1 -85881 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr12-182 chr12 111570037 111570281 + 36.4 0.000 intron (NM_001310121, intron 1 of 25) L3|LINE|CR1 29156 NM_002973 6311 Hs.76253 NM_002973 ENSG00000204842 ATXN2 ATX2|SCA2|TNRC13 ataxin 2 protein-coding chr11-112 chr11 95089738 95089982 + 36.4 0.000 promoter-TSS (NM_015036) promoter-TSS (NM_015036) 14 NM_015036 23052 Hs.167115 NM_015036 ENSG00000149218 ENDOD1 - endonuclease domain containing 1 protein-coding chr21-14 chr21 7258677 7258921 + 36.4 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -171838 NM_001322047 102724843 Hs.743984 NM_001322047 LOC102724843 - uncharacterized LOC102724843 protein-coding chr11-264 chr11 86152251 86152495 + 36.4 0.000 Intergenic Intergenic -82513 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr19-244 chr19 49867399 49867643 + 36.4 0.000 promoter-TSS (NM_007254) promoter-TSS (NM_007254) 55 NM_007254 11284 Hs.78016 NM_007254 ENSG00000039650 PNKP AOA4|EIEE10|MCSZ|PNK polynucleotide kinase 3'-phosphatase protein-coding chr7-788 chr7 129859262 129859506 + 36.4 0.000 intron (NM_001202498, intron 3 of 6) intron (NM_001202498, intron 3 of 6) -84370 NR_029615 406959 NR_029615 ENSG00000207691 MIR183 MIRN183|miR-183|miRNA183 microRNA 183 ncRNA chr1-421 chr1 117929496 117929740 + 36.4 0.000 promoter-TSS (NM_017686) promoter-TSS (NM_017686) 3 NM_017686 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding chr8-43 chr8 30083017 30083261 + 36.4 0.000 promoter-TSS (NM_001284239) promoter-TSS (NM_001284239) 69 NM_001284239 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding chr1-297 chr1 156054514 156054758 + 36.4 0.000 promoter-TSS (NM_020131) promoter-TSS (NM_020131) -90 NM_014017 28956 Hs.632483 NM_014017 ENSG00000116586 LAMTOR2 ENDAP|HSPC003|MAPBPIP|MAPKSP1AP|ROBLD3|Ragulator2|p14 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 protein-coding chr16-166 chr16 55499940 55500184 + 36.4 0.000 intron (NM_001127891, intron 11 of 12) intron (NM_001127891, intron 11 of 12) -9010 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr6-218 chr6 150925362 150925606 + 36.4 0.000 intron (NM_001350486, intron 10 of 27) intron (NM_001350486, intron 10 of 27) 58998 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-297 chr2 161308407 161308651 + 36.4 0.000 5' UTR (NM_005805, exon 1 of 12) 5' UTR (NM_005805, exon 1 of 12) 104 NM_005805 10213 Hs.740477 NM_005805 ENSG00000115233 PSMD14 PAD1|POH1|RPN11 proteasome 26S subunit, non-ATPase 14 protein-coding chr7-84 chr7 32495327 32495571 + 36.4 0.000 promoter-TSS (NM_001130710) promoter-TSS (NM_001130710) -40 NM_015060 23080 Hs.128056 NM_015060 ENSG00000105778 AVL9 KIAA0241 AVL9 cell migration associated protein-coding chr17-213 chr17 39573560 39573804 + 36.4 0.000 Intergenic CpG 34238 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr15-40 chr15 64703170 64703414 + 36.3 0.000 promoter-TSS (NM_002537) promoter-TSS (NM_002537) -11 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr19-381 chr19 2295077 2295321 + 36.3 0.000 intron (NM_001101391, intron 1 of 1) MLT1C|LTR|ERVL-MaLR 12955 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr19-446 chr19 10119766 10120010 + 36.3 0.000 promoter-TSS (NM_003755) promoter-TSS (NM_003755) 11 NM_003755 8666 Hs.529059 NM_003755 ENSG00000130811 EIF3G EIF3-P42|EIF3S4|eIF3-delta|eIF3-p44 eukaryotic translation initiation factor 3 subunit G protein-coding chr8-154 chr8 26640826 26641070 + 36.3 0.000 intron (NM_001244604, intron 8 of 13) intron (NM_001244604, intron 8 of 13) 62543 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr4-83 chr4 41214415 41214659 + 36.3 0.000 promoter-TSS (NM_004307) promoter-TSS (NM_004307) 5 NM_004307 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr15-289 chr15 57667388 57667632 + 36.3 0.000 intron (NR_104369, intron 11 of 12) intron (NR_104369, intron 11 of 12) -39011 NM_001018102 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding chr17-259 chr17 40054447 40054691 + 36.3 0.000 promoter-TSS (NM_001330211) promoter-TSS (NM_001330211) -161 NR_052017 9862 Hs.462983 NM_014815 ENSG00000008838 MED24 ARC100|CRSP100|CRSP4|DRIP100|MED5|THRAP4|TRAP100 mediator complex subunit 24 protein-coding chr1-389 chr1 113905129 113905373 + 36.3 0.000 promoter-TSS (NM_001308312) promoter-TSS (NM_001308312) -75 NM_022836 64858 Hs.591412 NM_022836 ENSG00000118655 DCLRE1B APOLLO|SNM1B|SNMIB DNA cross-link repair 1B protein-coding chr1-213 chr1 150282257 150282501 + 36.3 0.000 promoter-TSS (NM_144697) promoter-TSS (NM_144697) -175 NM_001300838 148523 Hs.54680 NM_144697 ENSG00000159208 CIART C1orf51|CHRONO|GM129 circadian associated repressor of transcription protein-coding chr8-49 chr8 63038849 63039093 + 36.3 0.000 promoter-TSS (NM_003878) promoter-TSS (NM_003878) -165 NM_003878 8836 Hs.78619 NM_003878 ENSG00000137563 GGH GH gamma-glutamyl hydrolase protein-coding chr6-131 chr6 117602512 117602756 + 36.3 0.000 promoter-TSS (NM_020399) promoter-TSS (NM_020399) -123 NM_001017408 57120 Hs.191539 NM_020399 ENSG00000047932 GOPC CAL|FIG|GOPC1|PIST|dJ94G16.2 golgi associated PDZ and coiled-coil motif containing protein-coding chr18-41 chr18 62522730 62522974 + 36.3 0.000 promoter-TSS (NM_017742) promoter-TSS (NM_017742) -173 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr1-598 chr1 100351427 100351671 + 36.3 0.000 promoter-TSS (NM_033312) promoter-TSS (NM_033312) -918 NM_033313 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr8-57 chr8 22109366 22109610 + 36.3 0.000 promoter-TSS (NM_024815) promoter-TSS (NM_024815) -69 NM_024815 79873 Hs.527101 NM_024815 ENSG00000275074 NUDT18 MTH3 nudix hydrolase 18 protein-coding chr19-415 chr19 11346338 11346582 + 36.3 0.000 promoter-TSS (NM_198536) promoter-TSS (NM_198536) -59 NM_001080503 126075 Hs.631636 NM_001080503 ENSG00000183401 CCDC159 - coiled-coil domain containing 159 protein-coding chr20-254 chr20 5578288 5578532 + 36.3 0.000 exon (NM_019593, exon 8 of 20) exon (NM_019593, exon 8 of 20) 32596 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr2-287 chr2 74198567 74198811 + 36.1 0.000 promoter-TSS (NM_006636) promoter-TSS (NM_006636) 74 NM_006636 10797 Hs.469030 NM_006636 ENSG00000065911 MTHFD2 NMDMC methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase protein-coding chr14-37 chr14 105301118 105301362 + 36.1 0.000 promoter-TSS (NM_001519) promoter-TSS (NM_001519) -239 NM_001242790 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr1-320 chr1 200739000 200739244 + 36.1 0.000 promoter-TSS (NM_203459) promoter-TSS (NM_203459) -450 NM_203459 23271 Hs.23585 NM_203459 ENSG00000118200 CAMSAP2 CAMSAP1L1 calmodulin regulated spectrin associated protein family member 2 protein-coding chr2-50 chr2 10123967 10124211 + 36.1 0.000 intron (NM_001034, intron 4 of 9) intron (NM_001034, intron 4 of 9) 1350 NM_001034 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr11-223 chr11 36431893 36432137 + 36.1 0.000 intron (NM_001160167, intron 5 of 8) intron (NM_001160167, intron 5 of 8) 31018 NM_001160169 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr11-354 chr11 57530795 57531039 + 36.1 0.000 promoter-TSS (NM_012456) promoter-TSS (NM_012456) -163 NM_012456 26519 Hs.235750 NM_012456 ENSG00000134809 TIMM10 TIM10|TIM10A|TIMM10A translocase of inner mitochondrial membrane 10 protein-coding chr5-203 chr5 43121248 43121492 + 36.1 0.000 promoter-TSS (NM_001330717) promoter-TSS (NM_001330717) -91 NM_001330711 7690 Hs.535804 NM_003432 ENSG00000172262 ZNF131 ZBTB35|pHZ-10 zinc finger protein 131 protein-coding chr3-232 chr3 75641138 75641382 + 36.1 0.000 Intergenic Intergenic 10497 NR_031714 100302212 NR_031714 ENSG00000283894 MIR1324 MIRN1324|hsa-mir-1324 microRNA 1324 ncRNA chr12-244 chr12 65279028 65279272 + 36.1 0.000 intron (NM_001193461, intron 1 of 6) CpG 163 NM_001193461 253827 Hs.339024 NM_198080 ENSG00000174099 MSRB3 DFNB74 methionine sulfoxide reductase B3 protein-coding chr7-167 chr7 1559329 1559573 + 36.1 0.000 Intergenic Intergenic -3246 NM_001097620 202915 Hs.592174 NM_152689 ENSG00000164855 TMEM184A SDMG1 transmembrane protein 184A protein-coding chr21-41 chr21 29130311 29130555 + 36.1 0.000 promoter-TSS (NM_001371372) promoter-TSS (NM_001371372) -211 NM_001286620 56911 Hs.222802 NM_020152 ENSG00000156265 MAP3K7CL C21orf7|HC21ORF7|TAK1L|TAKL|TAKL-1|TAKL-2|TAKL-4 MAP3K7 C-terminal like protein-coding chr12-112 chr12 27474495 27474739 + 36.1 0.000 intron (NM_001145010, intron 3 of 8) intron (NM_001145010, intron 3 of 8) 7807 NM_001145010 341346 Hs.282121 NM_001145010 ENSG00000165935 SMCO2 C12orf70 single-pass membrane protein with coiled-coil domains 2 protein-coding chr2-117 chr2 73071132 73071376 + 36.1 0.000 promoter-TSS (NM_001330404) promoter-TSS (NM_001330404) 70 NM_001330403 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr7-54 chr7 975389 975633 + 36.1 0.000 promoter-TSS (NM_001031617) promoter-TSS (NM_001031617) 38 NM_001031617 90639 Hs.121593 NM_001031617 ENSG00000240230 COX19 - cytochrome c oxidase assembly factor COX19 protein-coding chrX-106 chrX 153708574 153708818 + 36.1 0.000 intron (NM_005745, intron 4 of 7) intron (NM_005745, intron 4 of 7) 15405 NM_001139457 10134 Hs.522817 NM_005745 ENSG00000185825 BCAP31 6C6-AG|BAP31|CDM|DDCH|DXS1357E B cell receptor associated protein 31 protein-coding chr2-144 chr2 61764290 61764534 + 36.1 0.000 Intergenic CpG 89648 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr11-486 chr11 409310 409554 + 36.1 0.000 intron (NM_001135054, intron 2 of 9) intron (NM_001135054, intron 2 of 9) 5567 NM_001135054 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr17-359 chr17 78763635 78763879 + 36.0 0.000 intron (NM_004762, intron 1 of 12) MER44A|DNA|TcMar-Tigger 18451 NM_001365039 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr20-82 chr20 18466884 18467128 + 36.0 0.000 promoter-TSS (NM_001351683) promoter-TSS (NM_001351683) 24 NM_001367614 55184 Hs.472225 NM_018152 ENSG00000089091 DZANK1 ANKRD64|C20orf12|C20orf84 double zinc ribbon and ankyrin repeat domains 1 protein-coding chr10-130 chr10 50605136 50605380 + 36.0 0.000 intron (NM_147156, intron 1 of 10) MamRep1879|DNA|hAT-Tip100? 18698 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr10-244 chr10 50497723 50497967 + 36.0 0.000 intron (NM_147156, intron 3 of 10) intron (NM_147156, intron 3 of 10) 126111 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr2-512 chr2 159399802 159400046 + 36.0 0.000 intron (NM_001329858, intron 16 of 36) Tigger15a|DNA|TcMar-Tigger -113221 NM_152528 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding chr2-280 chr2 1730567 1730811 + 36.0 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 13826 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr19-510 chr19 28705122 28705366 + 36.0 0.000 intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) 22450 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo chr12-126 chr12 54300886 54301130 + 36.0 0.000 promoter-TSS (NM_001136023) promoter-TSS (NM_001136023) 7 NM_001136023 4778 Hs.75643 NM_006163 ENSG00000123405 NFE2 NF-E2|p45 nuclear factor, erythroid 2 protein-coding chr8-183 chr8 18084139 18084383 + 36.0 0.000 promoter-TSS (NM_177924) promoter-TSS (NM_177924) -154 NM_177924 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr14-226 chr14 102028726 102028970 + 36.0 0.000 intron (NM_001376, intron 48 of 77) MER58A|DNA|hAT-Charlie 58196 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr22-168 chr22 40346482 40346726 + 36.0 0.000 exon (NM_001123378, exon 1 of 12) exon (NM_001123378, exon 1 of 12) 104 NM_001123378 158 Hs.75527 NM_000026 ENSG00000239900 ADSL AMPS|ASASE|ASL adenylosuccinate lyase protein-coding chr4-224 chr4 169620260 169620504 + 36.0 0.000 promoter-TSS (NM_001243372) promoter-TSS (NM_001243372) -196 NM_001243372 1182 Hs.481186 NM_001829 ENSG00000109572 CLCN3 CLC3|ClC-3 chloride voltage-gated channel 3 protein-coding chr17-323 chr17 901454 901698 + 36.0 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -8056 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr14-98 chr14 67533014 67533258 + 36.0 0.000 promoter-TSS (NM_020715) promoter-TSS (NM_020715) -154 NM_020715 57475 Hs.594236 NM_020715 ENSG00000054690 PLEKHH1 - pleckstrin homology, MyTH4 and FERM domain containing H1 protein-coding chr1-94 chr1 248838101 248838345 + 36.0 0.000 promoter-TSS (NM_024836) promoter-TSS (NM_024836) -1 NM_024836 79894 Hs.521151 NM_024836 ENSG00000171161 ZNF672 - zinc finger protein 672 protein-coding chr3-431 chr3 194395965 194396209 + 36.0 0.000 3' UTR (NM_004488, exon 2 of 2) 3' UTR (NM_004488, exon 2 of 2) 3179 NM_004488 2814 Hs.73734 NM_004488 ENSG00000178732 GP5 CD42d|GPV glycoprotein V platelet protein-coding chr10-299 chr10 110502074 110502318 + 36.0 0.000 intron (NM_004419, intron 1 of 3) intron (NM_004419, intron 1 of 3) 4289 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr7-209 chr7 94301184 94301428 + 35.8 0.000 Intergenic Intergenic 90886 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr7-371 chr7 12715652 12715896 + 35.8 0.000 Intergenic Intergenic 28141 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding chr2-82 chr2 24123400 24123644 + 35.8 0.000 promoter-TSS (NM_199346) promoter-TSS (NM_199346) 53 NM_001145710 375190 Hs.710370 NM_198553 ENSG00000219626 FAM228B - family with sequence similarity 228 member B protein-coding chr4-197 chr4 7557475 7557719 + 35.8 0.000 intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 97569 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr19-257 chr19 55487427 55487671 + 35.8 0.000 promoter-TSS (NM_001195267) promoter-TSS (NM_001195267) -887 NM_001195267 284297 Hs.554182 NM_182571 ENSG00000179954 SSC5D S5D-SRCRB scavenger receptor cysteine rich family member with 5 domains protein-coding chr2-217 chr2 204452528 204452772 + 35.8 0.000 Intergenic Intergenic -92825 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr6-46 chr6 148578303 148578547 + 35.8 0.000 Intergenic Intergenic 69274 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr11-256 chr11 27218663 27218907 + 35.8 0.000 promoter-TSS (NR_125768) promoter-TSS (NR_125768) -17 NR_125768 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr6-43 chr6 26383047 26383291 + 35.8 0.000 promoter-TSS (NM_001197239) promoter-TSS (NM_001197239) 61 NM_006995 10385 Hs.373938 NM_006995 ENSG00000124508 BTN2A2 BT2.2|BTF2|BTN2.2 butyrophilin subfamily 2 member A2 protein-coding chr1-539 chr1 29709175 29709419 + 35.8 0.000 Intergenic Intergenic 328315 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr11-109 chr11 6612222 6612466 + 35.8 0.000 promoter-TSS (NM_006284) promoter-TSS (NM_006284) -128 NM_006284 6881 Hs.5158 NM_006284 ENSG00000166337 TAF10 TAF2A|TAF2H|TAFII30 TATA-box binding protein associated factor 10 protein-coding chr10-229 chr10 103054094 103054338 + 35.8 0.000 intron (NM_199076, intron 2 of 6) intron (NM_199076, intron 2 of 6) 99605 NM_001351174 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr7-175 chr7 101882130 101882374 + 35.8 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 64626 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr3-336 chr3 47781911 47782155 + 35.8 0.000 promoter-TSS (NM_003074) promoter-TSS (NM_003074) -140 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding chr10-447 chr10 119113906 119114150 + 35.8 0.000 intron (NM_001303113, intron 3 of 7) intron (NM_001303113, intron 3 of 7) 9915 NM_001303112 404636 Hs.434241 NM_207009 ENSG00000119979 DENND10 FAM45A DENN domain containing 10 protein-coding chr3-166 chr3 47009363 47009607 + 35.8 0.000 3' UTR (NM_015175, exon 54 of 54) 3' UTR (NM_015175, exon 54 of 54) -2057 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr10-253 chr10 116947265 116947509 + 35.8 0.000 intron (NM_001127211, intron 7 of 16) LFSINE_Vert|SINE|tRNA 57800 NM_018330 57698 Hs.501140 NM_018330 ENSG00000187164 SHTN1 KIAA1598|shootin-1 shootin 1 protein-coding chr1-514 chr1 214297034 214297278 + 35.8 0.000 intron (NM_020197, intron 1 of 11) MER5B|DNA|hAT-Charlie 15997 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr12-153 chr12 55829602 55829846 + 35.8 0.000 promoter-TSS (NM_032364) promoter-TSS (NM_032364) -88 NM_032364 85406 Hs.709320 NM_032364 ENSG00000135392 DNAJC14 DNAJ|DRIP78|HDJ3|LIP6 DnaJ heat shock protein family (Hsp40) member C14 protein-coding chr12-155 chr12 108832975 108833219 + 35.8 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) 3909 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr3-209 chr3 134331487 134331731 + 35.8 0.000 Intergenic Intergenic 18033 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr17-164 chr17 4997532 4997776 + 35.8 0.000 promoter-TSS (NM_001167985) promoter-TSS (NM_001167985) -44 NM_001167985 388324 Hs.658926 NM_213726 ENSG00000196388 INCA1 HSD45 inhibitor of CDK, cyclin A1 interacting protein 1 protein-coding chr14-34 chr14 50831145 50831389 + 35.8 0.000 promoter-TSS (NM_020921) promoter-TSS (NM_020921) -146 NM_016350 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr5-121 chr5 72320193 72320437 + 35.8 0.000 promoter-TSS (NM_001284403) promoter-TSS (NM_001284403) -52 NM_001284405 79810 Hs.126906 NM_024754 ENSG00000049883 PTCD2 - pentatricopeptide repeat domain 2 protein-coding chr3-362 chr3 184811957 184812201 + 35.8 0.000 promoter-TSS (NM_015303) promoter-TSS (NM_015303) -64 NM_001349294 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding chr2-299 chr2 178413668 178413912 + 35.7 0.000 non-coding (NR_110206, exon 1 of 3) non-coding (NR_110206, exon 1 of 3) 131 NR_110206 101927027 Hs.715694 NR_110204 ENSG00000223960 CHROMR CHROME|PRKRA-AS1 cholesterol induced regulator of metabolism RNA ncRNA chr13-30 chr13 110706233 110706477 + 35.7 0.000 promoter-TSS (NM_001352253) promoter-TSS (NM_001352253) 160 NM_001352252 79587 Hs.508725 NM_024537 ENSG00000134905 CARS2 COXPD27|cysRS cysteinyl-tRNA synthetase 2, mitochondrial protein-coding chr1-293 chr1 38138663 38138907 + 35.7 0.000 Intergenic Intergenic 49554 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr1-302 chr1 11934458 11934702 + 35.7 0.000 promoter-TSS (NM_000302) promoter-TSS (NM_000302) -137 NM_000302 5351 Hs.75093 NM_000302 ENSG00000083444 PLOD1 EDS6|EDSKCL1|LH|LH1|LLH|PLOD procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 protein-coding chr11-365 chr11 72223501 72223745 + 35.7 0.000 Intergenic CpG -1144 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr11-633 chr11 105047181 105047425 + 35.7 0.000 Intergenic Intergenic -1968 NM_001017534 114769 Hs.348365 NM_052889 ENSG00000204397 CARD16 COP|COP1|PSEUDO-ICE caspase recruitment domain family member 16 protein-coding chr17-77 chr17 5191791 5192035 + 35.7 0.000 promoter-TSS (NM_032530) promoter-TSS (NM_032530) -45 NM_032530 84622 Hs.658402 NM_032530 ENSG00000180626 ZNF594 - zinc finger protein 594 protein-coding chr4-134 chr4 121711565 121711809 + 35.7 0.000 Intergenic Intergenic -14707 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr19-359 chr19 55216476 55216720 + 35.7 0.000 Intergenic Intergenic -7097 NM_001161440 5794 Hs.179770 NM_002842 ENSG00000080031 PTPRH R-PTP-H|SAP1 protein tyrosine phosphatase receptor type H protein-coding chr1-562 chr1 182391724 182391968 + 35.7 0.000 promoter-TSS (NM_001033044) promoter-TSS (NM_001033044) -56 NM_001033044 2752 Hs.132016 NM_002065 ENSG00000135821 GLUL GLNS|GS|PIG43|PIG59 glutamate-ammonia ligase protein-coding chr10-152 chr10 44981294 44981538 + 35.7 0.000 intron (NM_032023, intron 3 of 10) L1MB1|LINE|L1 -2607 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr16-132 chr16 11742704 11742948 + 35.7 0.000 promoter-TSS (NM_001324024) promoter-TSS (NM_001324024) 31 NR_136673 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr13-109 chr13 23673435 23673679 + 35.7 0.000 3' UTR (NM_001204458, exon 10 of 10) 3' UTR (NM_001204458, exon 10 of 10) 94197 NM_018647 55504 Hs.149168 NM_018647 ENSG00000127863 TNFRSF19 TAJ|TAJ-alpha|TRADE|TROY TNF receptor superfamily member 19 protein-coding chr16-97 chr16 81007006 81007250 + 35.7 0.000 promoter-TSS (NM_001351968) promoter-TSS (NM_001351968) -209 NR_147838 56942 Hs.55028 NM_020188 ENSG00000103121 CMC2 2310061C15Rik|C16orf61|DC13 C-X9-C motif containing 2 protein-coding chr5-124 chr5 141923853 141924097 + 35.7 0.000 intron (NM_014773, intron 1 of 11) CpG 104 NM_001142603 9812 Hs.210532 NM_014773 ENSG00000081791 DELE1 DELE|KIAA0141 DAP3 binding cell death enhancer 1 protein-coding chr4-67 chr4 84666551 84666795 + 35.7 0.000 Intergenic L1MA3|LINE|L1 83546 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr11-361 chr11 65871718 65871962 + 35.5 0.000 intron (NM_016938, intron 3 of 10) intron (NM_016938, intron 3 of 10) 960 NM_016938 30008 Hs.731454 NM_016938 ENSG00000172638 EFEMP2 ARCL1B|FBLN4|MBP1|UPH1 EGF containing fibulin extracellular matrix protein 2 protein-coding chr8-91 chr8 102754147 102754391 + 35.5 0.000 Intergenic Intergenic -52553 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr7-109 chr7 43869602 43869846 + 35.5 0.000 promoter-TSS (NM_032014) promoter-TSS (NM_032014) -207 NM_032014 64951 Hs.284286 NM_032014 ENSG00000062582 MRPS24 HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47 mitochondrial ribosomal protein S24 protein-coding chr11-248 chr11 117316099 117316343 + 35.5 0.000 promoter-TSS (NM_012104) promoter-TSS (NM_012104) 35 NM_138971 23621 Hs.504003 NM_012104 ENSG00000186318 BACE1 ASP2|BACE|HSPC104 beta-secretase 1 protein-coding chr20-42 chr20 23362035 23362279 + 35.5 0.000 promoter-TSS (NM_022482) promoter-TSS (NM_022482) -25 NM_001317012 64412 Hs.709462 NM_022482 ENSG00000125812 GZF1 JLSM|ZBTB23|ZNF336 GDNF inducible zinc finger protein 1 protein-coding chr3-36 chr3 132722402 132722646 + 35.5 0.000 promoter-TSS (NM_153240) promoter-TSS (NM_153240) -65 NR_037804 100532724 Hs.511991 NR_037804 ENSG00000274810 NPHP3-ACAD11 NPHP3 NPHP3-ACAD11 readthrough (NMD candidate) ncRNA chr11-295 chr11 59669007 59669251 + 35.5 0.000 promoter-TSS (NM_152716) promoter-TSS (NM_152716) -92 NM_152716 219988 Hs.591960 NM_152716 ENSG00000166889 PATL1 Pat1b|hPat1b PAT1 homolog 1, processing body mRNA decay factor protein-coding chr9-75 chr9 133992112 133992356 + 35.5 0.000 promoter-TSS (NM_003371) promoter-TSS (NM_003371) 90 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr10-645 chr10 71998911 71999155 + 35.5 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 34638 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr6-229 chr6 112149811 112150055 + 35.5 0.000 intron (NM_001105206, intron 17 of 38) intron (NM_001105206, intron 17 of 38) 62342 NM_001033564 619208 Hs.591340 NM_001033564 ENSG00000203778 FAM229B C6orf225 family with sequence similarity 229 member B protein-coding chr8-51 chr8 28401931 28402175 + 35.5 0.000 Intergenic CpG -15593 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr20-194 chr20 5657448 5657692 + 35.5 0.000 Intergenic Intergenic -46564 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr2-293 chr2 121530981 121531225 + 35.5 0.000 TTS (NR_023343) TTS (NR_023343) 223 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA chr8-11 chr8 124998169 124998413 + 35.5 0.000 promoter-TSS (NM_003129) promoter-TSS (NM_003129) -93 NR_134457 105375744 Hs.575534 NR_134457 ENSG00000253513 LOC105375744 - uncharacterized LOC105375744 ncRNA chr1-198 chr1 26432066 26432310 + 35.5 0.000 promoter-TSS (NM_001243564) promoter-TSS (NM_001243564) -94 NM_001319959 79947 Hs.369385 NM_024887 ENSG00000117682 DHDDS CIT|CPT|DEDSM|DS|HDS|RP59|hCIT dehydrodolichyl diphosphate synthase subunit protein-coding chr9-229 chr9 119811077 119811321 + 35.5 0.000 Intergenic Intergenic -123861 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr15-128 chr15 55498161 55498405 + 35.4 0.000 non-coding (NR_037923, exon 1 of 16) non-coding (NR_037923, exon 1 of 16) 301 NR_037923 100533483 Hs.285051 NR_037923 ENSG00000261771 DNAAF4-CCPG1 DYX1C1-CCPG1 DNAAF4-CCPG1 readthrough (NMD candidate) ncRNA chr16-139 chr16 57480345 57480589 + 35.4 0.000 promoter-TSS (NM_001369621) promoter-TSS (NM_001369621) -90 NM_001369619 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr2-367 chr2 169095716 169095960 + 35.4 0.000 3' UTR (NM_001289763, exon 5 of 5) 3' UTR (NM_001289763, exon 5 of 5) 14731 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr6-163 chr6 156021709 156021953 + 35.4 0.000 Intergenic LTR16A|LTR|ERVL 75034 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA chr11-253 chr11 2902204 2902448 + 35.4 0.000 promoter-TSS (NM_001315501).2 promoter-TSS (NM_001315501).2 48 NM_001315502 5002 Hs.50868 NM_002555 ENSG00000110628 SLC22A18 BWR1A|BWSCR1A|HET|IMPT1|ITM|ORCTL2|SLC22A1L|TSSC5|p45-BWR1A solute carrier family 22 member 18 protein-coding chr16-118 chr16 18926492 18926736 + 35.4 0.000 promoter-TSS (NM_015092) promoter-TSS (NM_015092) -210 NM_015092 23049 Hs.460179 NM_015092 ENSG00000157106 SMG1 61E3.4|ATX|LIP SMG1 nonsense mediated mRNA decay associated PI3K related kinase protein-coding chr14-236 chr14 50920491 50920735 + 35.4 0.000 exon (NM_001163940, exon 6 of 19) exon (NM_001163940, exon 6 of 19) 23870 NM_001163940 5836 Hs.282417 NM_002863 ENSG00000100504 PYGL GSD6 glycogen phosphorylase L protein-coding chr10-192 chr10 124999590 124999834 + 35.4 0.000 intron (NM_001290214, intron 5 of 10) intron (NM_001290214, intron 5 of 10) 6306 NM_001363508 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr9-343 chr9 131373530 131373774 + 35.4 0.000 Intergenic CpG -56438 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr7-110 chr7 65006592 65006836 + 35.4 0.000 promoter-TSS (NR_145414) promoter-TSS (NR_145414) -27 NR_145414 2086 Hs.250693 NM_001007253 ENSG00000213462 ERV3-1 ERV-R|ERV3|ERVR|HERV-R|HERVR|envR endogenous retrovirus group 3 member 1, envelope protein-coding chr1-308 chr1 40241829 40242073 + 35.4 0.000 Intergenic Intergenic -5986 NM_001008740 127391 Hs.406265 NM_001008740 ENSG00000188800 TMCO2 dJ39G22.2 transmembrane and coiled-coil domains 2 protein-coding chr9-172 chr9 100429351 100429595 + 35.4 0.000 promoter-TSS (NM_001198806) promoter-TSS (NM_001198806) -41 NM_001198806 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr1-610 chr1 173824592 173824836 + 35.4 0.000 promoter-TSS (NM_001127181) promoter-TSS (NM_001127181) 41 NM_001365213 55157 Hs.647707 NM_018122 ENSG00000117593 DARS2 ASPRS|LBSL|MT-ASPRS|mtAspRS aspartyl-tRNA synthetase 2, mitochondrial protein-coding chr12-121 chr12 113184761 113185005 + 35.4 0.000 promoter-TSS (NM_001286215) promoter-TSS (NM_001286215) 595 NM_001111322 79039 Hs.506861 NM_024072 ENSG00000123064 DDX54 DP97 DEAD-box helicase 54 protein-coding chr9-310 chr9 128094312 128094556 + 35.4 0.000 intron (NM_001006642, intron 1 of 9) intron (NM_001006642, intron 1 of 9) 2970 NM_001265614 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr10-455 chr10 14648396 14648640 + 35.4 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) -44117 NM_001282697 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr5-380 chr5 120055984 120056228 + 35.4 0.000 Intergenic Intergenic -408172 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr15-29 chr15 82750361 82750605 + 35.4 0.000 promoter-TSS (NR_110099) promoter-TSS (NR_110099) -81 NR_110100 100505616 Hs.513091 NR_110096 ENSG00000250988 SNHG21 FSD2-AS1|SCARNA15HG small nucleolar RNA host gene 21 ncRNA chr2-169 chr2 20051725 20051969 + 35.4 0.000 promoter-TSS (NM_014713) promoter-TSS (NM_014713) -219 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr15-193 chr15 95247224 95247468 + 35.4 0.000 Intergenic Intergenic 79754 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA chr10-116 chr10 71860441 71860685 + 35.2 0.000 Intergenic Intergenic -9312 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr5-151 chr5 132265800 132266044 + 35.2 0.000 intron (NM_001131027, intron 2 of 5) intron (NM_001131027, intron 2 of 5) 8226 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr1-636 chr1 31007265 31007509 + 35.2 0.000 intron (NM_001020658, intron 3 of 21) intron (NM_001020658, intron 3 of 21) -39150 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr1-533 chr1 16324401 16324645 + 35.2 0.000 intron (NM_018994, intron 1 of 9) intron (NM_018994, intron 1 of 9) 27957 NM_018994 54455 Hs.522384 NM_018994 ENSG00000037637 FBXO42 Fbx42|JFK F-box protein 42 protein-coding chr1-240 chr1 117366806 117367050 + 35.2 0.000 promoter-TSS (NM_006699) promoter-TSS (NM_006699) -521 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr1-520 chr1 233543768 233544012 + 35.2 0.000 Intergenic Intergenic -70216 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding chr1-77 chr1 20786731 20786975 + 35.2 0.000 promoter-TSS (NM_016287) promoter-TSS (NM_016287) -165 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr20-46 chr20 56439811 56440055 + 35.2 0.000 intron (NM_001164116, intron 3 of 6) intron (NM_001164116, intron 3 of 6) 27673 NM_020356 57091 Hs.473144 NM_020356 ENSG00000087589 CASS4 C20orf32|CAS4|HEFL|HEPL Cas scaffold protein family member 4 protein-coding chr2-136 chr2 231666480 231666724 + 35.2 0.000 Intergenic Intergenic -41923 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr12-158 chr12 120201123 120201367 + 35.2 0.000 promoter-TSS (NR_038924) promoter-TSS (NR_038924) -34 NM_053275 6175 Hs.546285 NM_001002 ENSG00000089157 RPLP0 L10E|LP0|P0|PRLP0|RPP0 ribosomal protein lateral stalk subunit P0 protein-coding chr9-211 chr9 121074954 121075198 + 35.2 0.000 promoter-TSS (NM_001317163) promoter-TSS (NM_001317163) 121 NM_001369893 11064 Hs.653263 NM_007018 ENSG00000119397 CNTRL CEP1|CEP110|FAN|bA165P4.1 centriolin protein-coding chr4-92 chr4 47836729 47836973 + 35.2 0.000 intron (NR_125881, intron 1 of 2) CpG 1216 NM_001278586 10699 Hs.518618 NM_006587 ENSG00000145244 CORIN ATC2|CRN|Lrp4|PEE5|TMPRSS10 corin, serine peptidase protein-coding chr19-425 chr19 37779646 37779890 + 35.2 0.000 promoter-TSS (NM_001172689) promoter-TSS (NM_001172689) -178 NM_001172690 126231 Hs.531262 NM_152360 ENSG00000189144 ZNF573 - zinc finger protein 573 protein-coding chr7-336 chr7 155257611 155257855 + 35.2 0.000 Intergenic Intergenic -40039 NM_001346593 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr13-88 chr13 32829521 32829765 + 35.2 0.000 intron (NR_047020, intron 4 of 4) MER4B|LTR|ERV1 82009 NR_047020 100874167 Hs.406290 NR_047020 LINC00423 - long intergenic non-protein coding RNA 423 ncRNA chr5-67 chr5 134411853 134412097 + 35.2 0.000 promoter-TSS (NM_080656) promoter-TSS (NM_080656) -94 NM_080656 91368 Hs.156506 NM_080656 ENSG00000237190 CDKN2AIPNL C2AIL CDKN2A interacting protein N-terminal like protein-coding chr7-51 chr7 4775432 4775676 + 35.2 0.000 promoter-TSS (NM_014855) promoter-TSS (NM_014855) -69 NM_001364858 9907 Hs.558440 NM_014855 ENSG00000242802 AP5Z1 KIAA0415|SPG48|zeta adaptor related protein complex 5 subunit zeta 1 protein-coding chr10-255 chr10 133378222 133378466 + 35.2 0.000 promoter-TSS (NM_152911) promoter-TSS (NM_152911) -918 NM_207127 196743 Hs.501578 NM_152911 ENSG00000148832 PAOX PAO polyamine oxidase protein-coding chr2-237 chr2 232550648 232550892 + 35.2 0.000 promoter-TSS (NM_004846) promoter-TSS (NM_004846) -36 NM_001330202 9470 Hs.292026 NM_004846 ENSG00000135930 EIF4E2 4E-LP|4EHP|EIF4EL3|IF4e|h4EHP eukaryotic translation initiation factor 4E family member 2 protein-coding chr15-184 chr15 70875140 70875384 + 35.1 0.000 intron (NM_001284357, intron 2 of 16) intron (NM_001284357, intron 2 of 16) 17171 NM_020147 56906 Hs.591123 NM_020147 ENSG00000129028 THAP10 - THAP domain containing 10 protein-coding chr11-255 chr11 17077652 17077896 + 35.1 0.000 promoter-TSS (NM_001017) promoter-TSS (NM_001017) -107 NM_001017 6207 Hs.446588 NM_001017 ENSG00000110700 RPS13 S13 ribosomal protein S13 protein-coding chr1-260 chr1 94418060 94418304 + 35.1 0.000 promoter-TSS (NM_001122674) promoter-TSS (NM_001122674) -195 NM_001122674 5825 Hs.700576 NM_002858 ENSG00000117528 ABCD3 ABC43|CBAS5|PMP70|PXMP1|ZWS2 ATP binding cassette subfamily D member 3 protein-coding chr8-84 chr8 22597498 22597742 + 35.1 0.000 3' UTR (NM_176871, exon 10 of 10) 3' UTR (NM_176871, exon 10 of 10) -1979 NM_001013842 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr2-502 chr2 109611805 109612049 + 35.1 0.000 intron (NM_001321509, intron 1 of 10) L1MD1|LINE|L1 1740 NM_001321513 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr9-512 chr9 39464478 39464722 + 35.1 0.000 promoter-TSS (NR_003528) promoter-TSS (NR_003528) -74 NR_003528 401509 Hs.449445 NM_001032297 ZNF658B - zinc finger protein 658B (pseudogene) pseudo chr7-64 chr7 26200816 26201060 + 35.1 0.000 promoter-TSS (NM_007276) promoter-TSS (NM_007276) -192 NM_031243 3181 Hs.487774 NM_002137 ENSG00000122566 HNRNPA2B1 HNRNPA2|HNRNPB1|HNRPA2|HNRPA2B1|HNRPB1|IBMPFD2|RNPA2|SNRPB1 heterogeneous nuclear ribonucleoprotein A2/B1 protein-coding chrX-27 chrX 41333942 41334186 + 35.1 0.000 promoter-TSS (NM_001193416) promoter-TSS (NM_001193416) -98 NM_001193416 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr4-157 chr4 130563716 130563960 + 35.1 0.000 Intergenic LTR42|LTR|ERVL 187477 NR_147186 105377420 NR_147186 LINC02479 - long intergenic non-protein coding RNA 2479 ncRNA chr2-246 chr2 55269188 55269432 + 35.1 0.000 promoter-TSS (NM_001321002) promoter-TSS (NM_001321002) -62 NM_001321002 4528 Hs.149894 NM_002453 ENSG00000085760 MTIF2 - mitochondrial translational initiation factor 2 protein-coding chr1-316 chr1 109100019 109100263 + 35.1 0.000 promoter-TSS (NR_003023) promoter-TSS (NR_003023) -52 NR_003023 677766 Hs.550815 NR_003023 ENSG00000278249 SCARNA2 HBII-382|mgU2-25/61 small Cajal body-specific RNA 2 ncRNA chr4-79 chr4 1870522 1870766 + 35.1 0.000 promoter-TSS (NM_001042424) promoter-TSS (NM_001042424) -749 NM_001042424 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr1-459 chr1 12052076 12052320 + 35.1 0.000 Intergenic Intergenic -11105 NM_001243 943 Hs.1314 NM_001243 ENSG00000120949 TNFRSF8 CD30|D1S166E|Ki-1 TNF receptor superfamily member 8 protein-coding chr12-96 chr12 68365285 68365529 + 35.1 0.000 Intergenic Intergenic -32993 NM_001354974 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr10-61 chr10 31603596 31603840 + 35.1 0.000 Intergenic CpG -203963 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr22-99 chr22 46267706 46267950 + 35.1 0.000 promoter-TSS (NM_017931) promoter-TSS (NM_017931) -180 NM_017931 55020 Hs.435832 NM_017931 ENSG00000075234 TTC38 LL22NC03-5H6.5 tetratricopeptide repeat domain 38 protein-coding chr5-268 chr5 127011186 127011430 + 35.1 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 19250 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr4-68 chr4 87391165 87391409 + 34.9 0.000 promoter-TSS (NM_016245) promoter-TSS (NM_016245) -99 NM_016245 51170 Hs.594923 NM_016245 ENSG00000198189 HSD17B11 17-BETA-HSD11|17-BETA-HSDXI|17BHSD11|DHRS8|PAN1B|RETSDR2|SDR16C2 hydroxysteroid 17-beta dehydrogenase 11 protein-coding chr19-236 chr19 58440216 58440460 + 34.9 0.000 promoter-TSS (NM_003433) promoter-TSS (NM_003433) -185 NM_003433 7691 Hs.156169 NM_003433 ENSG00000131849 ZNF132 pHZ-12 zinc finger protein 132 protein-coding chr10-98 chr10 110497684 110497928 + 34.9 0.000 promoter-TSS (NM_004419) promoter-TSS (NM_004419) -101 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr5-89 chr5 103120179 103120423 + 34.9 0.000 promoter-TSS (NM_001345876) promoter-TSS (NM_001345876) 0 NM_001345875 23262 Hs.212046 NM_015216 ENSG00000145725 PPIP5K2 CFAP160|DFNB100|HISPPD1|IP7K2|VIP2 diphosphoinositol pentakisphosphate kinase 2 protein-coding KI270587.1-1 KI270587.1 675 919 + 34.9 0.000 NA NA NA NA chr20-15 chr20 58389040 58389284 + 34.9 0.000 promoter-TSS (NM_004738) promoter-TSS (NM_004738) 43 NM_004738 9217 Hs.182625 NM_004738 ENSG00000124164 VAPB ALS8|VAMP-B|VAP-B VAMP associated protein B and C protein-coding chr20-76 chr20 56392228 56392472 + 34.9 0.000 promoter-TSS (NM_001033522) promoter-TSS (NM_001033522) -13 NM_198434 6790 Hs.250822 NM_003600 ENSG00000087586 AURKA AIK|ARK1|AURA|BTAK|PPP1R47|STK15|STK6|STK7 aurora kinase A protein-coding chr9-208 chr9 68779810 68780054 + 34.9 0.000 promoter-TSS (NM_138333) promoter-TSS (NM_138333) -133 NM_138333 116224 Hs.655572 NM_138333 ENSG00000187866 FAM122A C9orf42 family with sequence similarity 122A protein-coding chr14-171 chr14 60622797 60623041 + 34.9 0.000 Intergenic Intergenic -16297 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA chr12-82 chr12 63843773 63844017 + 34.9 0.000 promoter-TSS (NM_020762) promoter-TSS (NM_020762) -805 NM_020762 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr4-357 chr4 173125250 173125494 + 34.9 0.000 Intergenic MIRc|SINE|MIR -43439 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding chr22-124 chr22 45612713 45612957 + 34.9 0.000 Intergenic Intergenic -7188 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr3-86 chr3 105366597 105366841 + 34.9 0.000 promoter-TSS (NM_001627) promoter-TSS (NM_001627) 6 NM_001243283 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr20-116 chr20 34303211 34303455 + 34.9 0.000 promoter-TSS (NM_001322084) promoter-TSS (NM_001322084) 22 NM_000687 191 Hs.388004 NM_000687 ENSG00000101444 AHCY SAHH|adoHcyase adenosylhomocysteinase protein-coding chr11-169 chr11 66568273 66568517 + 34.9 0.000 exon (NM_003793, exon 1 of 13) exon (NM_003793, exon 1 of 13) 211 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr16-85 chr16 31459326 31459570 + 34.9 0.000 5' UTR (NM_001105247, exon 1 of 6) 5' UTR (NM_001105247, exon 1 of 6) 452 NM_001105247 79798 Hs.732945 NM_024742 ENSG00000140691 ARMC5 AIMAH2 armadillo repeat containing 5 protein-coding chr9-138 chr9 6006969 6007213 + 34.9 0.000 promoter-TSS (NR_039811) promoter-TSS (NR_039811) -735 NR_039811 100616288 NR_039811 ENSG00000263575 MIR4665 mir-4665 microRNA 4665 ncRNA chr4-153 chr4 10019035 10019279 + 34.9 0.000 intron (NM_001001290, intron 2 of 12) CpG-21045 2340 NM_020041 56606 Hs.444612 NM_020041 ENSG00000109667 SLC2A9 GLUT9|GLUTX|UAQTL2|URATv1 solute carrier family 2 member 9 protein-coding chr12-134 chr12 752277 752521 + 34.9 0.000 promoter-TSS (NM_014823) promoter-TSS (NM_014823) -180 NM_014823 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr1-447 chr1 172144749 172144993 + 34.9 0.000 promoter-TSS (NR_038397) promoter-TSS (NR_038397) -36 NR_038397 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr3-92 chr3 49469956 49470200 + 34.9 0.000 promoter-TSS (NM_004393) promoter-TSS (NM_004393) -54 NM_001177642 1605 Hs.76111 NM_004393 ENSG00000173402 DAG1 156DAG|A3a|AGRNR|DAG|LGMDR16|MDDGA9|MDDGC7|MDDGC9 dystroglycan 1 protein-coding chr16-313 chr16 56383128 56383372 + 34.9 0.000 intron (NM_001144, intron 10 of 13) L2a|LINE|L2 41739 NM_001323511 267 Hs.295137 NM_001144 ENSG00000159461 AMFR GP78|RNF45 autocrine motility factor receptor protein-coding chr17-185 chr17 21284483 21284727 + 34.9 0.000 promoter-TSS (NM_145109) promoter-TSS (NM_145109) -106 NM_145109 5606 Hs.514012 NM_002756 ENSG00000034152 MAP2K3 MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2 mitogen-activated protein kinase kinase 3 protein-coding chr7-242 chr7 23106100 23106344 + 34.9 0.000 promoter-TSS (NM_018846) promoter-TSS (NM_018846) 437 NR_033328 55975 Hs.654817 NM_018846 ENSG00000122550 KLHL7 CISS3|KLHL6|SBBI26 kelch like family member 7 protein-coding chr20-78 chr20 33811151 33811395 + 34.9 0.000 promoter-TSS (NR_110623) promoter-TSS (NR_110623) -75 NM_176812 128866 Hs.472471 NM_176812 ENSG00000101421 CHMP4B C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4 charged multivesicular body protein 4B protein-coding chr20-65 chr20 45336758 45337002 + 34.9 0.000 intron (NM_002999, intron 1 of 4) intron (NM_002999, intron 1 of 4) 11544 NM_002999 6385 Hs.632267 NM_002999 ENSG00000124145 SDC4 SYND4 syndecan 4 protein-coding chr1-400 chr1 226662783 226663027 + 34.9 0.000 intron (NR_103784, intron 1 of 1) intron (NR_103784, intron 1 of 1) 12163 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr2-209 chr2 112481043 112481287 + 34.9 0.000 promoter-TSS (NM_153712) promoter-TSS (NM_153712) -991 NM_153712 150465 Hs.358997 NM_153712 ENSG00000114999 TTL - tubulin tyrosine ligase protein-coding chr17-435 chr17 5516253 5516497 + 34.9 0.000 intron (NM_014922, intron 14 of 15) L3|LINE|CR1 -15369 NM_001162371 728392 Hs.104305 NM_001162371 ENSG00000286190 LOC728392 - uncharacterized LOC728392 protein-coding chr6-180 chr6 144216233 144216477 + 34.9 0.000 Intergenic CpG 65838 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding chr4-320 chr4 54541611 54541855 + 34.9 0.000 Intergenic LTR85a|LTR|Gypsy? 65398 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr1-594 chr1 87226400 87226644 + 34.9 0.000 intron (NM_001290053, intron 2 of 3) intron (NM_001290053, intron 2 of 3) 13853 NM_001290053 101927844 Hs.694591 NM_001290053 LINC02801 - long intergenic non-protein coding RNA 2801 protein-coding chr12-142 chr12 53496292 53496536 + 34.8 0.000 intron (NM_006301, intron 1 of 14) intron (NM_006301, intron 1 of 14) 3044 NM_001193511 7786 Hs.713539 NM_006301 ENSG00000139625 MAP3K12 DLK|MEKK12|MUK|ZPK|ZPKP1 mitogen-activated protein kinase kinase kinase 12 protein-coding chr3-339 chr3 49813639 49813883 + 34.8 0.000 exon (NM_003335, exon 1 of 24) exon (NM_003335, exon 1 of 24) 192 NM_003335 7318 Hs.16695 NM_003335 ENSG00000182179 UBA7 D8|UBA1B|UBE1L|UBE2 ubiquitin like modifier activating enzyme 7 protein-coding chrX-47 chrX 44542947 44543191 + 34.8 0.000 promoter-TSS (NM_173794) promoter-TSS (NM_173794) -210 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding chr20-146 chr20 36848355 36848599 + 34.8 0.000 intron (NM_080627, intron 1 of 14) MIRc|SINE|MIR 11396 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr9-154 chr9 132669737 132669981 + 34.8 0.000 promoter-TSS (NM_012204) promoter-TSS (NM_012204) 124 NR_136309 64794 Hs.660767 NM_022779 ENSG00000125485 DDX31 PPP1R25 DEAD-box helicase 31 protein-coding chr2-207 chr2 96208684 96208928 + 34.8 0.000 promoter-TSS (NM_020151) promoter-TSS (NM_020151) 29 NM_020151 56910 Hs.469331 NM_020151 ENSG00000084090 STARD7 GTT1 StAR related lipid transfer domain containing 7 protein-coding chr2-180 chr2 219206533 219206777 + 34.8 0.000 promoter-TSS (NM_138802) promoter-TSS (NM_138802) -127 NM_138802 130617 Hs.534540 NM_138802 ENSG00000158552 ZFAND2B AIRAPL zinc finger AN1-type containing 2B protein-coding chr4-655 chr4 2066500 2066744 + 34.8 0.000 3' UTR (NM_178557, exon 3 of 3) 3' UTR (NM_178557, exon 3 of 3) 7295 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr20-141 chr20 25407605 25407849 + 34.8 0.000 promoter-TSS (NR_134574) promoter-TSS (NR_134574) 44 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr1-55 chr1 150974788 150975032 + 34.8 0.000 promoter-TSS (NM_022075) promoter-TSS (NM_022075) -75 NM_022075 29956 Hs.744017 NM_013384 ENSG00000143418 CERS2 L3|LASS2|SP260|TMSG1 ceramide synthase 2 protein-coding chr3-93 chr3 49940002 49940246 + 34.8 0.000 promoter-TSS (NM_005777) promoter-TSS (NM_005777) -26 NR_146071 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr2-177 chr2 132416472 132416716 + 34.8 0.000 promoter-TSS (NM_001508) promoter-TSS (NM_001508) -211 NM_001508 2863 Hs.432395 NM_001508 ENSG00000183840 GPR39 - G protein-coupled receptor 39 protein-coding chr2-537 chr2 241507785 241508029 + 34.8 0.000 intron (NM_001282305, intron 1 of 10) CpG 438 NM_001271978 10494 Hs.516807 NM_006374 ENSG00000115694 STK25 SOK1|YSK1 serine/threonine kinase 25 protein-coding chr8-93 chr8 125556393 125556637 + 34.8 0.000 Intergenic Intergenic 124306 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr8-600 chr8 18661113 18661357 + 34.8 0.000 intron (NM_015310, intron 9 of 15) intron (NM_015310, intron 9 of 15) 147632 NM_206909 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr7-319 chr7 43926409 43926653 + 34.6 0.000 promoter-TSS (NM_015983) promoter-TSS (NM_015983) 95 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr13-14 chr13 52652625 52652869 + 34.6 0.000 promoter-TSS (NM_006704) promoter-TSS (NM_006704) -89 NM_001320831 10910 Hs.281902 NM_006704 ENSG00000165416 SUGT1 SGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone protein-coding chr18-26 chr18 74495902 74496146 + 34.6 0.000 promoter-TSS (NM_018235) promoter-TSS (NM_018235) -339 NM_001370248 55748 Hs.149185 NM_018235 ENSG00000133313 CNDP2 CN2|CPGL|HEL-S-13|HsT2298|PEPA carnosine dipeptidase 2 protein-coding chr13-49 chr13 45418218 45418462 + 34.6 0.000 promoter-TSS (NM_001010875) promoter-TSS (NM_001010875) 33 NM_001010875 253512 Hs.591230 NM_001010875 ENSG00000174032 SLC25A30 KMCP1 solute carrier family 25 member 30 protein-coding chr14-71 chr14 67600125 67600369 + 34.6 0.000 promoter-TSS (NM_001363694) promoter-TSS (NM_001363694) 21 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr8-384 chr8 28365717 28365961 + 34.6 0.000 intron (NM_018660, intron 1 of 9) intron (NM_018660, intron 1 of 9) 20621 NM_018660 55893 Hs.435535 NM_018660 ENSG00000186918 ZNF395 HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14 zinc finger protein 395 protein-coding chr14-124 chr14 104753872 104754116 + 34.6 0.000 intron (NM_021709, intron 1 of 2) L2c|LINE|L2 847 NM_006427 10572 Hs.112058 NM_006427 ENSG00000184990 SIVA1 CD27BP|SIVA|Siva-1|Siva-2 SIVA1 apoptosis inducing factor protein-coding chr8-128 chr8 31107343 31107587 + 34.6 0.000 intron (NM_000553, intron 18 of 34) intron (NM_000553, intron 18 of 34) -74109 NM_001323312 29942 Hs.373778 NM_013357 ENSG00000172733 PURG PURG-A|PURG-B|PURGA|PURGB purine rich element binding protein G protein-coding chr14-168 chr14 34496942 34497186 + 34.6 0.000 Intergenic Intergenic -34824 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr3-343 chr3 58471322 58471566 + 34.6 0.000 Intergenic Intergenic -20652 NM_001128214 200845 Hs.13982 NM_153331 ENSG00000168301 KCTD6 KCASH3 potassium channel tetramerization domain containing 6 protein-coding chr2-989 chr2 143398222 143398466 + 34.6 0.000 intron (NM_018460, intron 6 of 13) intron (NM_018460, intron 6 of 13) 268925 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr2-570 chr2 210955596 210955840 + 34.6 0.000 Intergenic Intergenic 338147 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr6-45 chr6 96521702 96521946 + 34.6 0.000 promoter-TSS (NM_015323) promoter-TSS (NM_015323) 18 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding chr11-202 chr11 16738373 16738617 + 34.6 0.000 promoter-TSS (NM_001367872) promoter-TSS (NM_001367872) -18 NM_001367872 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding chr22-167 chr22 38057090 38057334 + 34.6 0.000 promoter-TSS (NM_012407) promoter-TSS (NM_012407) -43 NM_001039584 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr11-275 chr11 60906471 60906715 + 34.6 0.000 promoter-TSS (NM_014502) promoter-TSS (NM_014502) -8 NM_014502 27339 Hs.502705 NM_014502 ENSG00000110107 PRPF19 NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4 pre-mRNA processing factor 19 protein-coding chr22-189 chr22 50783454 50783698 + 34.6 0.000 promoter-TSS (NM_001350017) promoter-TSS (NM_001350017) 60 NM_001350014 11158 Hs.446425 NM_007081 ENSG00000079974 RABL2B - RAB, member of RAS oncogene family like 2B protein-coding chr1-305 chr1 26276243 26276487 + 34.6 0.000 intron (NM_022778, intron 12 of 13) intron (NM_022778, intron 12 of 13) -3721 NM_031286 83442 Hs.109051 NM_031286 ENSG00000142669 SH3BGRL3 HEL-S-297|SH3BP-1|TIP-B1 SH3 domain binding glutamate rich protein like 3 protein-coding chr6-162 chr6 151044974 151045218 + 34.6 0.000 intron (NM_001350486, intron 26 of 27) intron (NM_001350486, intron 26 of 27) 38088 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr17-339 chr17 35713321 35713565 + 34.6 0.000 intron (NM_001030006, intron 20 of 21) intron (NM_001030006, intron 20 of 21) -18196 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr13-100 chr13 29923895 29924139 + 34.6 0.000 intron (NR_047501, intron 1 of 1) intron (NR_047501, intron 1 of 1) 2634 NR_047501 100861573 Hs.585619 NR_047501 ENSG00000224405 LINC00572 - long intergenic non-protein coding RNA 572 ncRNA chr6-113 chr6 36986272 36986516 + 34.6 0.000 non-coding (NR_130739, exon 1 of 12) non-coding (NR_130739, exon 1 of 12) 157 NR_130739 23787 Hs.485262 NM_014341 ENSG00000137409 MTCH1 CGI-64|PIG60|PSAP|SLC25A49 mitochondrial carrier 1 protein-coding chr2-352 chr2 214069306 214069550 + 34.5 0.000 intron (NR_047660, intron 12 of 14) intron (NR_047660, intron 12 of 14) 311361 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr19-285 chr19 18426164 18426408 + 34.5 0.000 intron (NM_001009998, intron 1 of 16) intron (NM_001009998, intron 1 of 16) 6888 NM_032627 170463 Hs.515259 NM_032627 ENSG00000130511 SSBP4 - single stranded DNA binding protein 4 protein-coding chr10-121 chr10 102121332 102121576 + 34.5 0.000 promoter-TSS (NM_001113407) promoter-TSS (NM_001113407) -981 NM_001113407 8861 Hs.454418 NM_003893 ENSG00000198728 LDB1 CLIM-2|CLIM2|LDB-1|NLI LIM domain binding 1 protein-coding chrX-48 chrX 65534728 65534972 + 34.5 0.000 promoter-TSS (NM_031206) promoter-TSS (NM_031206) -44 NM_001170649 81887 Hs.522675 NM_031206 ENSG00000001497 LAS1L Las1-like|WTS|dJ475B7.2 LAS1 like, ribosome biogenesis factor protein-coding chr16-212 chr16 66007814 66008058 + 34.5 0.000 Intergenic Intergenic -358755 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr7-145 chr7 152463767 152464011 + 34.5 0.000 promoter-TSS (NR_027387) promoter-TSS (NR_027387) -235 NR_027387 100128822 Hs.647112 NR_027387 ENSG00000261455 LINC01003 - long intergenic non-protein coding RNA 1003 ncRNA chr13-75 chr13 45206377 45206621 + 34.5 0.000 intron (NM_004128, intron 4 of 7) intron (NM_004128, intron 4 of 7) -5454 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr20-37 chr20 3686960 3687204 + 34.5 0.000 3' UTR (NM_001367089, exon 20 of 20) 3' UTR (NM_001367089, exon 20 of 20) -4392 NM_025220 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr10-158 chr10 113385129 113385373 + 34.5 0.000 Intergenic Intergenic -165580 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr2-929 chr2 43855707 43855951 + 34.5 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 16858 NM_022437 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr6-81 chr6 122789334 122789578 + 34.5 0.000 exon (NM_006714, exon 1 of 8) exon (NM_006714, exon 1 of 8) 198 NM_006714 10924 Hs.486357 NM_006714 ENSG00000172594 SMPDL3A ASM3A|ASML3a|yR36GH4.1 sphingomyelin phosphodiesterase acid like 3A protein-coding chr9-152 chr9 96654479 96654723 + 34.5 0.000 intron (NM_153698, intron 2 of 5) intron (NM_153698, intron 2 of 5) 716 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding chr11-283 chr11 66438860 66439104 + 34.5 0.000 promoter-TSS (NR_120588) promoter-TSS (NR_120588) -134 NM_170739 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding chr17-143 chr17 18039022 18039266 + 34.5 0.000 promoter-TSS (NM_024052) promoter-TSS (NM_024052) 24 NM_145691 91647 Hs.528889 NM_145691 ENSG00000171953 ATPAF2 ATP12|ATP12p|LP3663|MC5DN1 ATP synthase mitochondrial F1 complex assembly factor 2 protein-coding chr15-111 chr15 41283985 41284229 + 34.5 0.000 non-coding (NR_026757, exon 1 of 4) non-coding (NR_026757, exon 1 of 4) 117 NR_026757 729082 Hs.380164 NR_026757 ENSG00000247556 OIP5-AS1 cyrano|linc-OIP5 OIP5 antisense RNA 1 ncRNA chr22-112 chr22 47328835 47329079 + 34.5 0.000 Intergenic Intergenic -16614 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr2-307 chr2 240981320 240981564 + 34.5 0.000 intron (NM_001351305, intron 27 of 31) intron (NM_001351305, intron 27 of 31) -13991 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr11-631 chr11 86940624 86940868 + 34.5 0.000 intron (NR_120591, intron 3 of 4) intron (NR_120591, intron 3 of 4) 14649 NM_012193 8322 Hs.591968 NM_012193 ENSG00000174804 FZD4 CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4 frizzled class receptor 4 protein-coding chr14-189 chr14 99968183 99968427 + 34.5 0.000 Intergenic L2b|LINE|L2 -3117 NM_001330221 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr19-299 chr19 10403548 10403792 + 34.3 0.000 promoter-TSS (NR_031592) promoter-TSS (NR_031592) -128 NM_007065 11140 Hs.160958 NM_007065 ENSG00000105401 CDC37 P50CDC37 cell division cycle 37 protein-coding chr3-214 chr3 190513776 190514020 + 34.3 0.000 promoter-TSS (NM_001167930) promoter-TSS (NM_001167930) -187 NM_001167930 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr10-57 chr10 131981855 131982099 + 34.3 0.000 promoter-TSS (NM_004052) promoter-TSS (NM_004052) 36 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr4-225 chr4 183174200 183174444 + 34.3 0.000 intron (NM_024949, intron 1 of 22) HAL1|LINE|L1 66312 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr6-41 chr6 169701926 169702170 + 34.3 0.000 promoter-TSS (NM_001317342) promoter-TSS (NM_001317342) 15 NM_001350625 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding chr10-174 chr10 33238109 33238353 + 34.3 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 96436 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr1-553 chr1 149886734 149886978 + 34.3 0.000 promoter-TSS (NM_003528) promoter-TSS (NM_003528) -119 NM_003517 8338 Hs.408067 NM_003517 ENSG00000184260 HIST2H2AC H2A|H2A-GL101|H2A/q|H2AFQ histone cluster 2 H2A family member c protein-coding chr14-198 chr14 85607664 85607908 + 34.3 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 74437 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr21-3 chr21 43262448 43262692 + 34.3 0.000 Intergenic Intergenic 69469 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA chr1-716 chr1 85607303 85607547 + 34.3 0.000 Intergenic Intergenic 26664 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding chr15-242 chr15 81897368 81897612 + 34.3 0.000 Intergenic Intergenic 148528 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr18-42 chr18 70154626 70154870 + 34.2 0.000 intron (NM_001318520, intron 14 of 47) intron (NM_001318520, intron 14 of 47) 50939 NM_001318520 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding chr17-400 chr17 27294033 27294277 + 34.2 0.000 promoter-TSS (NR_145520) promoter-TSS (NR_145520) 41 NM_134265 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding chr15-260 chr15 60389174 60389418 + 34.2 0.000 intron (NM_004039, intron 1 of 12) intron (NM_004039, intron 1 of 12) 8690 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr17-257 chr17 7627696 7627940 + 34.2 0.000 promoter-TSS (NM_001289115) promoter-TSS (NM_001289115) 3 NM_001320847 112483 Hs.10846 NM_133491 ENSG00000141504 SAT2 SSAT2 spermidine/spermine N1-acetyltransferase family member 2 protein-coding chr9-726 chr9 134150812 134151056 + 34.2 0.000 intron (NM_052821, intron 7 of 12) L1M5|LINE|L1 11142 NM_052821 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr5-185 chr5 157948871 157949115 + 34.2 0.000 Intergenic Intergenic -89848 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr19-210 chr19 58451501 58451745 + 34.2 0.000 promoter-TSS (NM_207395) promoter-TSS (NM_207395) 1 NM_207395 388569 Hs.186970 NM_207395 ENSG00000249471 ZNF324B - zinc finger protein 324B protein-coding chr22-139 chr22 47154805 47155049 + 34.2 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -190644 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr19-401 chr19 45103268 45103512 + 34.2 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 10211 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr19-374 chr19 41397363 41397607 + 34.2 0.000 promoter-TSS (NM_000709) promoter-TSS (NM_000709) -126 NM_020158 56915 Hs.283741 NM_020158 ENSG00000077348 EXOSC5 RRP41B|RRP46|Rrp46p|hRrp46p|p12B exosome component 5 protein-coding chr13-54 chr13 35771933 35772177 + 34.2 0.000 3' UTR (NM_001330072, exon 17 of 17) 3' UTR (NM_001330072, exon 17 of 17) 74328 NR_132115 100507114 Hs.236298 NR_132115 ENSG00000236036 LINC00445 - long intergenic non-protein coding RNA 445 ncRNA chr4-182 chr4 184453442 184453686 + 34.2 0.000 intron (NM_002199, intron 1 of 8) intron (NM_002199, intron 1 of 8) 20986 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr1-904 chr1 246647292 246647536 + 34.2 0.000 exon (NM_001139459, exon 9 of 9) exon (NM_001139459, exon 9 of 9) -76995 NM_016002 51097 Hs.498397 NM_016002 ENSG00000143653 SCCPDH CGI-49|NET11 saccharopine dehydrogenase (putative) protein-coding chr18-68 chr18 3451629 3451873 + 34.2 0.000 5' UTR (NM_170695, exon 1 of 3) 5' UTR (NM_170695, exon 1 of 3) 158 NM_173210 7050 Hs.373550 NM_003244 ENSG00000177426 TGIF1 HPE4|TGIF TGFB induced factor homeobox 1 protein-coding chr3-249 chr3 48473245 48473489 + 34.2 0.000 promoter-TSS (NM_001272082) promoter-TSS (NM_001272082) -209 NM_001272082 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr9-86 chr9 34458387 34458631 + 34.2 0.000 promoter-TSS (NM_001184941) promoter-TSS (NM_001184941) 61 NM_001184943 203259 Hs.493771 NM_147202 ENSG00000164970 FAM219A C9orf25 family with sequence similarity 219 member A protein-coding chr22-137 chr22 46074051 46074295 + 34.2 0.000 Intergenic Intergenic -3152 NR_148973 642648 Hs.631363 NR_148973 LOC642648 - uncharacterized LOC642648 ncRNA chr15-129 chr15 68277662 68277906 + 34.2 0.000 promoter-TSS (NM_015322) promoter-TSS (NM_015322) 39 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr18-30 chr18 36129562 36129806 + 34.2 0.000 promoter-TSS (NM_001324468) promoter-TSS (NM_001324468) -215 NM_001242879 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr20-181 chr20 53901079 53901323 + 34.2 0.000 Intergenic Intergenic -25492 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr12-312 chr12 1474788 1475032 + 34.2 0.000 intron (NR_027948, intron 19 of 19) intron (NR_027948, intron 19 of 19) -25581 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr6-92 chr6 145735302 145735546 + 34.0 0.000 promoter-TSS (NM_001360057) promoter-TSS (NM_001360057) 96 NM_001360071 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr2-372 chr2 186486028 186486272 + 34.0 0.000 promoter-TSS (NM_018471) promoter-TSS (NM_018471) -110 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding chr16-181 chr16 67667928 67668172 + 34.0 0.000 exon (NM_001012984, exon 3 of 4) exon (NM_001012984, exon 3 of 4) 1236 NM_001012984 388284 Hs.632208 NM_001012984 ENSG00000159761 C16orf86 - chromosome 16 open reading frame 86 protein-coding chr2-267 chr2 47034262 47034506 + 34.0 0.000 intron (NM_001288951, intron 15 of 20) intron (NM_001288951, intron 15 of 20) -92529 NM_001171508 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr10-151 chr10 44959386 44959630 + 34.0 0.000 promoter-TSS (NM_032023) promoter-TSS (NM_032023) 181 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr12-108 chr12 4031303 4031547 + 34.0 0.000 Intergenic (GCGCC)n|Simple_repeat|Simple_repeat -157977 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr2-201 chr2 27050710 27050954 + 34.0 0.000 promoter-TSS (NM_001035507) promoter-TSS (NM_001035507) -568 NR_046730 100874031 Hs.132725 NR_046730 ENSG00000231636 AGBL5-AS1 - AGBL5 antisense RNA 1 ncRNA chr2-426 chr2 231961451 231961695 + 34.0 0.000 promoter-TSS (NM_001257282) promoter-TSS (NM_001257282) -10 NM_001257282 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr12-150 chr12 6534403 6534647 + 34.0 0.000 promoter-TSS (NM_001289746) promoter-TSS (NM_001289746) 8 NM_002046 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr3-288 chr3 128650778 128651022 + 34.0 0.000 promoter-TSS (NM_002950) promoter-TSS (NM_002950) -82 NM_002950 6184 Hs.518244 NM_002950 ENSG00000163902 RPN1 OST1|RBPH1 ribophorin I protein-coding chr3-337 chr3 49351838 49352082 + 34.0 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 6393 NM_001329503 2876 Hs.76686 NM_000581 ENSG00000233276 GPX1 GPXD|GSHPX1 glutathione peroxidase 1 protein-coding chr10-427 chr10 88880466 88880710 + 34.0 0.000 5' UTR (NM_020799, exon 1 of 11) 5' UTR (NM_020799, exon 1 of 11) 343 NM_020799 57559 Hs.16229 NM_020799 ENSG00000138134 STAMBPL1 ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 STAM binding protein like 1 protein-coding chr5-94 chr5 57173785 57174029 + 34.0 0.000 promoter-TSS (NM_001331037) promoter-TSS (NM_001331037) -41 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr2-95 chr2 47906651 47906895 + 34.0 0.000 promoter-TSS (NM_001190274) promoter-TSS (NM_001190274) -980 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr3-100 chr3 49021879 49022123 + 34.0 0.000 promoter-TSS (NM_018114) promoter-TSS (NM_018114) -120 NM_199069 25915 Hs.31387 NM_199069 ENSG00000178057 NDUFAF3 2P1|C3orf60|E3-3|MC1DN18 NADH:ubiquinone oxidoreductase complex assembly factor 3 protein-coding chr18-62 chr18 11908299 11908543 + 34.0 0.000 promoter-TSS (NR_040242) promoter-TSS (NR_040242) -104 NR_040241 65258 Hs.712666 NM_023075 ENSG00000154889 MPPE1 PGAP5 metallophosphoesterase 1 protein-coding chr6-167 chr6 17042681 17042925 + 34.0 0.000 Intergenic L1ME1|LINE|L1 -59455 NM_001190766 401236 Hs.677399 NM_001190766 ENSG00000230873 STMND1 - stathmin domain containing 1 protein-coding chr11-64 chr11 805138 805382 + 34.0 0.000 promoter-TSS (NM_145887) promoter-TSS (NM_145887) -29 NM_145887 55367 Hs.592290 NM_018494 ENSG00000177595 PIDD1 LRDD|PIDD p53-induced death domain protein 1 protein-coding chr2-281 chr2 17977169 17977413 + 34.0 0.000 Intergenic Intergenic 98624 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding chr15-100 chr15 65517523 65517767 + 34.0 0.000 promoter-TSS (NR_135486) promoter-TSS (NR_135486) 44 NM_130434 54878 Hs.458609 NM_017743 ENSG00000074603 DPP8 DP8|DPRP-1|DPRP1|MST097|MSTP097|MSTP135|MSTP141 dipeptidyl peptidase 8 protein-coding chr13-337 chr13 63636778 63637022 + 34.0 0.000 Intergenic Intergenic -100535 NR_002171 283491 Hs.363054 NR_002171 OR7E156P - olfactory receptor family 7 subfamily E member 156 pseudogene pseudo chr16-266 chr16 80938006 80938250 + 33.9 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -45532 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr9-227 chr9 113187971 113188215 + 33.9 0.000 intron (NM_015258, intron 13 of 27) intron (NM_015258, intron 13 of 27) 33184 NM_015258 23307 Hs.522351 NM_015258 ENSG00000119321 FKBP15 FKBP133|KIAA0674|PPP1R76 FKBP prolyl isomerase 15 protein-coding chr11-291 chr11 17209210 17209454 + 33.9 0.000 Intergenic Intergenic -1346 NM_002645 5286 Hs.175343 NM_002645 ENSG00000011405 PIK3C2A CPK|OCSKD|PI3-K-C2(ALPHA)|PI3-K-C2A|PI3K-C2-alpha|PI3K-C2alpha phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha protein-coding chr14-121 chr14 89549789 89550033 + 33.9 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) -26305 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA chr11-290 chr11 5280615 5280859 + 33.9 0.000 Intergenic Intergenic -10792 NM_005330 3046 Hs.655195 NM_005330 ENSG00000213931 HBE1 HBE hemoglobin subunit epsilon 1 protein-coding chr6-179 chr6 136289835 136290079 + 33.9 0.000 promoter-TSS (NM_001301038) promoter-TSS (NM_001301038) -106 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding chr11-479 chr11 95068582 95068826 + 33.9 0.000 non-coding (NR_103726, exon 2 of 2) non-coding (NR_103726, exon 2 of 2) 1827 NM_032102 10929 Hs.476680 NM_032102 ENSG00000263465 SRSF8 DSM-1|SFRS2B|SRP46 serine and arginine rich splicing factor 8 protein-coding chr10-321 chr10 69337600 69337844 + 33.9 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 18875 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr15-139 chr15 52529191 52529435 + 33.9 0.000 promoter-TSS (NM_000259) promoter-TSS (NM_000259) -263 NM_000259 4644 Hs.21213 NM_000259 ENSG00000197535 MYO5A GS1|MYH12|MYO5|MYR12 myosin VA protein-coding chr20-22 chr20 5126588 5126832 + 33.9 0.000 promoter-TSS (NM_002592) promoter-TSS (NM_002592) -88 NM_002592 5111 Hs.147433 NM_002592 ENSG00000132646 PCNA ATLD2 proliferating cell nuclear antigen protein-coding chr1-360 chr1 154001767 154002011 + 33.9 0.000 exon (NM_207308, exon 36 of 40) exon (NM_207308, exon 36 of 40) 11127 NM_001030 6232 Hs.546291 NM_001030 ENSG00000177954 RPS27 DBA17|MPS-1|MPS1|S27 ribosomal protein S27 protein-coding chr11-334 chr11 65850733 65850977 + 33.9 0.000 exon (NM_152760, exon 6 of 13) exon (NM_152760, exon 6 of 13) 7325 NM_005507 1072 Hs.170622 NM_005507 ENSG00000172757 CFL1 CFL|HEL-S-15|cofilin cofilin 1 protein-coding chr3-160 chr3 127588988 127589232 + 33.9 0.000 intron (NM_001353001, intron 1 of 11) intron (NM_001353001, intron 1 of 11) 1623 NM_001353002 131601 Hs.6418 NM_016372 ENSG00000163870 TPRA1 GPR175|TMEM227|TPRA40 transmembrane protein adipocyte associated 1 protein-coding chr6-115 chr6 53547942 53548186 + 33.9 0.000 Intergenic CpG -2963 NM_001197115 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr4-405 chr4 39637673 39637917 + 33.9 0.000 intron (NM_001317896, intron 1 of 5) intron (NM_001317896, intron 1 of 5) 1070 NM_174921 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr3-220 chr3 138921841 138922085 + 33.9 0.000 Intergenic MIR3|SINE|MIR 22057 NR_121649 103344930 Hs.195033 NR_121649 ENSG00000244578 LINC01391 - long intergenic non-protein coding RNA 1391 ncRNA chr2-344 chr2 132438610 132438854 + 33.9 0.000 intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 5021 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA chr3-201 chr3 64685614 64685858 + 33.9 0.000 intron (NR_038264, intron 1 of 5) CpG 866 NR_038264 100507098 Hs.660881 NR_038264 ENSG00000241684 ADAMTS9-AS2 - ADAMTS9 antisense RNA 2 ncRNA chr16-138 chr16 56989410 56989654 + 33.9 0.000 promoter-TSS (NM_001330552) promoter-TSS (NM_001330552) -25 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr6-50 chr6 166382927 166383171 + 33.9 0.000 promoter-TSS (NR_073093) promoter-TSS (NR_073093) -36 NR_073093 51660 Hs.172755 NM_016098 ENSG00000060762 MPC1 BRP44L|CGI-129|MPYCD|SLC54A1 mitochondrial pyruvate carrier 1 protein-coding chr13-27 chr13 23889340 23889584 + 33.9 0.000 promoter-TSS (NM_001135816) promoter-TSS (NM_001135816) -4 NM_001135816 542767 Hs.642624 NM_001014442 PCOTH C1QTNF9B-AS1 Pro-X-Gly collagen triple helix like repeat containing protein-coding chr4-220 chr4 121668446 121668690 + 33.9 0.000 intron (NM_001154, intron 12 of 12) intron (NM_001154, intron 12 of 12) 28412 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr14-66 chr14 54509815 54510059 + 33.9 0.000 promoter-TSS (NM_006568) promoter-TSS (NM_006568) 31 NM_006568 10668 Hs.59106 NM_006568 ENSG00000100532 CGRRF1 CGR19|RNF197 cell growth regulator with ring finger domain 1 protein-coding chr3-243 chr3 197960115 197960359 + 33.9 0.000 promoter-TSS (NR_026787) promoter-TSS (NR_026787) 20 NR_026786 89782 Hs.518540 NM_033029 ENSG00000185621 LMLN GP63|INV|IX14|LMNL1|MSP leishmanolysin like peptidase protein-coding chrX-55 chrX 49269146 49269390 + 33.7 0.000 promoter-TSS (NM_033215) promoter-TSS (NM_033215) -525 NM_033215 89801 Hs.433652 NM_033215 ENSG00000049769 PPP1R3F HB2E|LL0XNC01-7P3.1|R3F protein phosphatase 1 regulatory subunit 3F protein-coding chr6-152 chr6 13615275 13615519 + 33.7 0.000 promoter-TSS (NM_001317724) promoter-TSS (NM_001317724) 62 NM_016167 51406 Hs.306242 NM_016167 ENSG00000225921 NOL7 C6orf90|PQBP3|RARG-1|dJ223E5.2 nucleolar protein 7 protein-coding chr16-124 chr16 2033472 2033716 + 33.7 0.000 intron (NM_001252073, intron 1 of 5) intron (NM_001252073, intron 1 of 5) 300 NM_001252075 9351 Hs.440896 NM_004785 ENSG00000065054 SLC9A3R2 E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1 SLC9A3 regulator 2 protein-coding chr11-185 chr11 6683357 6683601 + 33.7 0.000 promoter-TSS (NM_022061) promoter-TSS (NM_022061) -139 NM_022061 63875 Hs.523456 NM_022061 ENSG00000158042 MRPL17 L17mt|LIP2|MRP-L17|MRP-L26|RPL17L|RPML26 mitochondrial ribosomal protein L17 protein-coding chr11-150 chr11 59106863 59107107 + 33.7 0.000 promoter-TSS (NM_198947) promoter-TSS (NM_198947) -200 NM_001142704 374393 Hs.186579 NM_198947 ENSG00000189057 FAM111B CANP|POIKTMP family with sequence similarity 111 member B protein-coding chr1-645 chr1 53512200 53512444 + 33.7 0.000 intron (NM_147193, intron 7 of 9) intron (NM_147193, intron 7 of 9) 52923 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr13-189 chr13 98495862 98496106 + 33.7 0.000 intron (NM_001032296, intron 2 of 10) intron (NM_001032296, intron 2 of 10) 26141 NM_003576 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr9-61 chr9 37120441 37120685 + 33.7 0.000 promoter-TSS (NM_032226) promoter-TSS (NM_032226) -35 NM_001289121 84186 Hs.654700 NM_032226 ENSG00000147905 ZCCHC7 AIR1|HSPC086 zinc finger CCHC-type containing 7 protein-coding chr19-275 chr19 2540880 2541124 + 33.7 0.000 intron (NM_052847, intron 3 of 4) CpG 64875 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr19-350 chr19 19732967 19733211 + 33.7 0.000 promoter-TSS (NM_021030) promoter-TSS (NM_021030) 23 NM_021030 7561 Hs.659932 NM_021030 ENSG00000105708 ZNF14 GIOT-4|KOX6 zinc finger protein 14 protein-coding chr16-257 chr16 34586693 34586937 + 33.7 0.000 Intergenic Intergenic -205335 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr17-157 chr17 48972424 48972668 + 33.7 0.000 Intergenic Intergenic -3950 NM_004123 2695 Hs.1454 NM_004123 ENSG00000159224 GIP - gastric inhibitory polypeptide protein-coding chr5-255 chr5 10551432 10551676 + 33.7 0.000 Intergenic Intergenic -12516 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr1-522 chr1 244214409 244214653 + 33.7 0.000 Intergenic Intergenic -138104 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr4-268 chr4 86831359 86831603 + 33.7 0.000 intron (NM_197965, intron 3 of 5) intron (NM_197965, intron 3 of 5) 17903 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr2-442 chr2 45293195 45293439 + 33.7 0.000 Intergenic Intergenic -38376 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA chr2-271 chr2 120856722 120856966 + 33.7 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 64563 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr2-238 chr2 15360076 15360320 + 33.7 0.000 intron (NR_052013, intron 32 of 50) Tigger3b|DNA|TcMar-Tigger 201136 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding chr5-88 chr5 154858433 154858677 + 33.7 0.000 promoter-TSS (NM_001301073) promoter-TSS (NM_001301073) 38 NM_001301082 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr6-467 chr6 132133114 132133358 + 33.7 0.000 promoter-TSS (NR_146223) promoter-TSS (NR_146223) -742 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr7-298 chr7 101856948 101857192 + 33.7 0.000 intron (NM_181552, intron 1 of 23) intron (NM_181552, intron 1 of 23) 39444 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr13-133 chr13 75621288 75621532 + 33.7 0.000 5' UTR (NM_005358, exon 1 of 30) 5' UTR (NM_005358, exon 1 of 30) 976 NM_005358 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr17-54 chr17 59331506 59331750 + 33.7 0.000 promoter-TSS (NM_001005404) promoter-TSS (NM_001005404) -27 NM_001005404 388403 Hs.463613 NM_001005404 ENSG00000175155 YPEL2 FKSG4 yippee like 2 protein-coding chr4-331 chr4 89134958 89135202 + 33.7 0.000 Intergenic MIR|SINE|MIR 22263 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr3-302 chr3 25790122 25790366 + 33.7 0.000 promoter-TSS (NM_001145294) promoter-TSS (NM_001145294) 154 NM_017897 54995 Hs.55781 NM_017897 ENSG00000151093 OXSM CEM1|FASN2D|KASI|KS 3-oxoacyl-ACP synthase, mitochondrial protein-coding chr2-167 chr2 241161617 241161861 + 33.6 0.000 intron (NM_001282413, intron 5 of 8) intron (NM_001282413, intron 5 of 8) 11272 NM_002712 5510 Hs.36587 NM_002712 ENSG00000115685 PPP1R7 SDS22 protein phosphatase 1 regulatory subunit 7 protein-coding chr1-332 chr1 45521935 45522179 + 33.6 0.000 promoter-TSS (NM_002574) promoter-TSS (NM_002574) -119 NM_002574 5052 Hs.180909 NM_002574 ENSG00000117450 PRDX1 MSP23|NKEF-A|NKEFA|PAG|PAGA|PAGB|PRX1|PRXI|TDPX2 peroxiredoxin 1 protein-coding chr10-224 chr10 79159310 79159554 + 33.6 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 90466 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr12-98 chr12 76084598 76084842 + 33.6 0.000 promoter-TSS (NM_004537) promoter-TSS (NM_004537) -35 NM_139207 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr6-168 chr6 18226652 18226896 + 33.6 0.000 intron (NM_003472, intron 9 of 10) LTR5_Hs|LTR|ERVK 37756 NM_003472 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding KI270744.1-1 KI270744.1 108381 108625 + 33.6 0.000 NA NA NA NA chr7-329 chr7 104979493 104979737 + 33.6 0.000 Intergenic Intergenic 11550 NR_039981 100216546 Hs.369356 NR_039981 LINC01004 - long intergenic non-protein coding RNA 1004 ncRNA chr17-343 chr17 47719523 47719767 + 33.6 0.000 Intergenic Intergenic -13591 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr20-209 chr20 40990673 40990917 + 33.6 0.000 intron (NR_145525, intron 1 of 2) intron (NR_145525, intron 1 of 2) 10082 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr19-514 chr19 33868756 33869000 + 33.6 0.000 Intergenic Intergenic 72008 NM_001129994 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr4-180 chr4 150679526 150679770 + 33.6 0.000 intron (NM_001367550, intron 37 of 56) intron (NM_001367550, intron 37 of 56) 97497 NM_006439 10586 Hs.584852 NM_006439 ENSG00000181541 MAB21L2 MCOPS14|MCSKS14 mab-21 like 2 protein-coding chr13-44 chr13 26557441 26557685 + 33.6 0.000 promoter-TSS (NM_001291965) promoter-TSS (NM_001291965) -120 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr1-314 chr1 67685076 67685320 + 33.6 0.000 promoter-TSS (NM_001199742) promoter-TSS (NM_001199742) -3 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr1-547 chr1 47569885 47570129 + 33.6 0.000 Intergenic MIRb|SINE|MIR -132690 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr3-205 chr3 113515088 113515332 + 33.6 0.000 promoter-TSS (NM_144718) promoter-TSS (NM_144718) -54 NM_144718 152185 Hs.477144 NM_144718 ENSG00000163611 SPICE1 CCDC52|SPICE spindle and centriole associated protein 1 protein-coding chr11-523 chr11 74748542 74748786 + 33.6 0.000 promoter-TSS (NM_001098638) promoter-TSS (NM_001098638) -185 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr13-39 chr13 110870115 110870359 + 33.6 0.000 promoter-TSS (NR_027701) promoter-TSS (NR_027701) 71 NR_027701 283487 Hs.245390 NM_178514 ENSG00000255874 LINC00346 C13orf29|NCRNA00346 long intergenic non-protein coding RNA 346 ncRNA chr3-684 chr3 171417852 171418096 + 33.6 0.000 intron (NM_001161563, intron 1 of 31) intron (NM_001161563, intron 1 of 31) 42431 NM_001161565 23043 Hs.34024 NM_015028 ENSG00000154310 TNIK MRT54 TRAF2 and NCK interacting kinase protein-coding chr5-74 chr5 139561162 139561406 + 33.6 0.000 promoter-TSS (NM_003339) promoter-TSS (NM_003339) -55 NM_003339 7322 Hs.108332 NM_003339 ENSG00000131508 UBE2D2 E2(17)KB2|PUBC1|UBC4|UBC4/5|UBCH4|UBCH5B ubiquitin conjugating enzyme E2 D2 protein-coding chr1-599 chr1 101200574 101200818 + 33.6 0.000 Intergenic Intergenic 35832 NR_104626 101928370 Hs.534209 NR_104626 LOC101928370 - uncharacterized LOC101928370 ncRNA chr15-48 chr15 100889454 100889698 + 33.6 0.000 intron (NM_001293815, intron 3 of 9) intron (NM_001293815, intron 3 of 9) 9745 NM_001293815 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr12-212 chr12 57865215 57865459 + 33.6 0.000 Intergenic CpG -18608 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr8-112 chr8 94823234 94823478 + 33.6 0.000 promoter-TSS (NM_017864) promoter-TSS (NM_017864) 66 NR_073444 55656 Hs.727669 NM_017864 ENSG00000164941 INTS8 C8orf52|INT8 integrator complex subunit 8 protein-coding chr7-262 chr7 5302575 5302819 + 33.4 0.000 intron (NM_001040661, intron 10 of 10) CpG 19754 NM_001300847 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr7-169 chr7 5428206 5428450 + 33.4 0.000 5' UTR (NM_001354886, exon 1 of 1) 5' UTR (NM_001354886, exon 1 of 1) 599 NM_001354886 100129484 Hs.147507 NM_001354886 LOC100129484 - uncharacterized LOC100129484 protein-coding chr5-112 chr5 112737741 112737985 + 33.4 0.000 promoter-TSS (NM_001354898) promoter-TSS (NM_001354898) -22 NM_001354906 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding chr9-160 chr9 128504591 128504835 + 33.4 0.000 promoter-TSS (NM_001003722) promoter-TSS (NM_001003722) 21 NM_001003722 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr8-100 chr8 143368691 143368935 + 33.4 0.000 promoter-TSS (NM_052924) promoter-TSS (NM_052924) -63 NM_052924 114822 Hs.521912 NM_052924 ENSG00000158106 RHPN1 ODF5|RHOPHILIN|RHPN rhophilin Rho GTPase binding protein 1 protein-coding chr15-147 chr15 38490270 38490514 + 33.4 0.000 3' UTR (NM_005739, exon 17 of 17) 3' UTR (NM_005739, exon 17 of 17) 36265 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr7-189 chr7 6447969 6448213 + 33.4 0.000 promoter-TSS (NM_139179) promoter-TSS (NM_139179) -79 NM_001142936 221955 Hs.487498 NM_139179 ENSG00000164535 DAGLB DAGLBETA|KCCR13L diacylglycerol lipase beta protein-coding chr9-291 chr9 15511024 15511268 + 33.4 0.000 promoter-TSS (NM_001317898) promoter-TSS (NM_001317898) -127 NM_001128217 11168 Hs.658434 NM_021144 ENSG00000164985 PSIP1 DFS70|LEDGF|PAIP|PSIP2|p52|p75 PC4 and SFRS1 interacting protein 1 protein-coding chr17-349 chr17 63827385 63827629 + 33.4 0.000 promoter-TSS (NM_002805) promoter-TSS (NM_002805) 76 NM_002805 5705 Hs.79387 NM_002805 ENSG00000087191 PSMC5 S8|SUG-1|SUG1|TBP10|TRIP1|p45|p45/SUG proteasome 26S subunit, ATPase 5 protein-coding chr2-361 chr2 46073553 46073797 + 33.4 0.000 intron (NM_005400, intron 10 of 14) intron (NM_005400, intron 10 of 14) -223732 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr9-382 chr9 137482148 137482392 + 33.4 0.000 intron (NM_001098537, intron 21 of 34) L1MC1|LINE|L1 -22936 NM_001130970 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr16-213 chr16 67192086 67192330 + 33.4 0.000 promoter-TSS (NM_001950) promoter-TSS (NM_001950) 53 NM_001950 1874 Hs.108371 NM_001950 ENSG00000205250 E2F4 E2F-4 E2F transcription factor 4 protein-coding chr11-383 chr11 11027367 11027611 + 33.4 0.000 Intergenic Intergenic 169272 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr8-253 chr8 23356074 23356318 + 33.4 0.000 intron (NM_002318, intron 3 of 13) L3|LINE|CR1 19988 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr7-374 chr7 17276202 17276446 + 33.4 0.000 Intergenic Intergenic -22328 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding chr1-1531 chr1 93567458 93567702 + 33.4 0.000 intron (NM_001308251, intron 6 of 7) intron (NM_001308251, intron 6 of 7) 17582 NM_001308251 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr20-90 chr20 3045964 3046208 + 33.4 0.000 promoter-TSS (NM_030811) promoter-TSS (NM_030811) 34 NM_030811 64949 Hs.18946 NM_030811 ENSG00000125901 MRPS26 C20orf193|GI008|MRP-S13|MRP-S26|MRPS13|NY-BR-87|RPMS13|dJ534B8.3 mitochondrial ribosomal protein S26 protein-coding chr1-748 chr1 15200560 15200804 + 33.4 0.000 intron (NR_135082, intron 1 of 2) intron (NR_135082, intron 1 of 2) -29058 NM_001278502 727684 Hs.667584 NM_001278501 C1orf195 - chromosome 1 open reading frame 195 protein-coding chr2-130 chr2 74654102 74654346 + 33.4 0.000 promoter-TSS (NM_004263) promoter-TSS (NM_004263) -4 NM_001271662 10505 Hs.25887 NM_004263 ENSG00000135622 SEMA4F M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M ssemaphorin 4F protein-coding chr12-76 chr12 119667733 119667977 + 33.3 0.000 promoter-TSS (NM_006253) promoter-TSS (NM_006253) -278 NM_006253 5564 Hs.741184 NM_006253 ENSG00000111725 PRKAB1 AMPK|HAMPKb protein kinase AMP-activated non-catalytic subunit beta 1 protein-coding chr16-367 chr16 58098563 58098807 + 33.3 0.000 Intergenic Intergenic 30696 NM_013242 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr17-264 chr17 68909145 68909389 + 33.3 0.000 intron (NM_001288985, intron 17 of 39) MER58A|DNA|hAT-Charlie 46125 NM_001288985 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr1-648 chr1 94783604 94783848 + 33.3 0.000 intron (NR_160783, intron 1 of 3) intron (NR_160783, intron 1 of 3) 36506 NR_160779 101928079 Hs.596857 NR_104131 ENSG00000224081 SLC44A3-AS1 LINC01057|XLOC_000303 SLC44A3 antisense RNA 1 ncRNA chr3-359 chr3 177934186 177934430 + 33.3 0.000 Intergenic Intergenic 117443 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-205 chr1 147242938 147243182 + 33.3 0.000 promoter-TSS (NM_001348452) promoter-TSS (NM_001348452) -82 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding chr18-50 chr18 35497605 35497849 + 33.3 0.000 promoter-TSS (NM_001308064) promoter-TSS (NM_001308064) -119 NM_001308064 125476 Hs.464903 NM_194281 ENSG00000153391 INO80C C18orf37|IES6|hIes6 INO80 complex subunit C protein-coding chr13-46 chr13 49313945 49314189 + 33.3 0.000 intron (NM_001079670, intron 10 of 10) intron (NM_001079670, intron 10 of 10) 66142 NM_001193478 81602 Hs.388220 NM_030911 ENSG00000102543 CDADC1 NYD-SP15|bA103J18.1 cytidine and dCMP deaminase domain containing 1 protein-coding chr22-162 chr22 46762332 46762576 + 33.3 0.000 promoter-TSS (NM_014346) promoter-TSS (NM_014346) -163 NM_001284303 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr16-234 chr16 89320477 89320721 + 33.3 0.000 promoter-TSS (NM_001242885) promoter-TSS (NM_001242885) -534 NM_001242885 100287036 Hs.656995 NM_001242885 LOC100287036 - uncharacterized LOC100287036 protein-coding chr5-227 chr5 31232302 31232546 + 33.3 0.000 intron (NM_001362435, intron 1 of 10) intron (NM_001362435, intron 1 of 10) 38738 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding chr1-570 chr1 228087736 228087980 + 33.3 0.000 intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) 4708 NM_001024227 375 Hs.286221 NM_001658 ENSG00000143761 ARF1 PVNH8 ADP ribosylation factor 1 protein-coding chr16-225 chr16 67109772 67110016 + 33.3 0.000 promoter-TSS (NM_001320540) promoter-TSS (NM_001320540) -47 NM_001320541 80262 Hs.513666 NM_025187 ENSG00000125149 C16orf70 C16orf6|LIN10|lin-10 chromosome 16 open reading frame 70 protein-coding chr8-133 chr8 94719614 94719858 + 33.3 0.000 promoter-TSS (NM_181787) promoter-TSS (NM_181787) -164 NM_181787 286148 Hs.567828 NM_181787 ENSG00000156162 DPY19L4 - dpy-19 like 4 protein-coding chr2-684 chr2 106956968 106957212 + 33.3 0.000 Intergenic Intergenic -69981 NM_032528 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding chr3-316 chr3 149300122 149300366 + 33.3 0.000 Intergenic MER72B|LTR|ERV1 33194 NM_001184723 116441 Hs.22026 NM_138786 ENSG00000163762 TM4SF18 L6D transmembrane 4 L six family member 18 protein-coding chr20-169 chr20 50725038 50725282 + 33.3 0.000 Intergenic Intergenic -6420 NM_032521 84612 Hs.589848 NM_032521 ENSG00000124171 PARD6B PAR6B par-6 family cell polarity regulator beta protein-coding chr1-453 chr1 231337970 231338214 + 33.3 0.000 promoter-TSS (NM_175876) promoter-TSS (NM_175876) -201 NM_032018 83932 Hs.554892 NM_032018 ENSG00000010072 SPRTN C1orf124|DVC1|PRO4323|spartan SprT-like N-terminal domain protein-coding chr9-222 chr9 37800897 37801141 + 33.3 0.000 exon (NM_024345, exon 1 of 7) exon (NM_024345, exon 1 of 7) 222 NM_024345 79269 Hs.118394 NM_024345 ENSG00000122741 DCAF10 WDR32 DDB1 and CUL4 associated factor 10 protein-coding chr16-233 chr16 88510391 88510635 + 33.3 0.000 intron (NM_153813, intron 3 of 9) intron (NM_153813, intron 3 of 9) 20540 NR_148997 100128882 Hs.722546 NR_148997 ENSG00000261744 LOC100128882 - uncharacterized LOC100128882 ncRNA chr15-81 chr15 99455028 99455272 + 33.3 0.000 Intergenic Intergenic -110267 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding chr3-217 chr3 32522650 32522894 + 33.3 0.000 Intergenic L1MCa|LINE|L1 -16383 NR_106753 102465247 NR_106753 ENSG00000276147 MIR548AY hsa-mir-548ay microRNA 548ay ncRNA chr3-491 chr3 119831918 119832162 + 33.3 0.000 intron (NM_001354596, intron 9 of 9) MLT1F|LTR|ERVL-MaLR 49330 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding chr6-148 chr6 107459482 107459726 + 33.3 0.000 promoter-TSS (NM_020381) promoter-TSS (NM_020381) -40 NM_020381 57107 Hs.745008 NM_020381 ENSG00000164494 PDSS2 C6orf210|COQ10D3|COQ1B|DLP1|bA59I9.3|hDLP1 decaprenyl diphosphate synthase subunit 2 protein-coding chr3-283 chr3 117399451 117399695 + 33.3 0.000 Intergenic Intergenic 291352 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr20-97 chr20 24672923 24673167 + 33.3 0.000 Intergenic Intergenic 203084 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr3-190 chr3 12663932 12664176 + 33.3 0.000 promoter-TSS (NR_148941) promoter-TSS (NR_148941) 63 NR_148941 5894 Hs.159130 NM_002880 ENSG00000132155 RAF1 CMD1NN|CRAF|NS5|Raf-1|c-Raf Raf-1 proto-oncogene, serine/threonine kinase protein-coding chr1-791 chr1 219771071 219771315 + 33.3 0.000 Intergenic Intergenic 157458 NM_018713 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr2-397 chr2 70248629 70248873 + 33.3 0.000 promoter-TSS (NM_001351517) promoter-TSS (NM_001351517) 42 NM_001351518 7072 Hs.413123 NM_022037 ENSG00000116001 TIA1 TIA-1|WDM TIA1 cytotoxic granule associated RNA binding protein protein-coding chr11-386 chr11 35530140 35530384 + 33.1 0.000 promoter-TSS (NM_001282675) promoter-TSS (NM_001282675) 38 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr1-1063 chr1 114780538 114780782 + 33.1 0.000 promoter-TSS (NM_001102396) promoter-TSS (NM_001102396) 25 NM_025073 80143 Hs.709277 NM_025073 ENSG00000052723 SIKE1 SIKE suppressor of IKBKE 1 protein-coding chr7-489 chr7 134660853 134661097 + 33.1 0.000 intron (NM_199186, intron 2 of 3) intron (NM_199186, intron 2 of 3) 14122 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr9-419 chr9 16964324 16964568 + 33.1 0.000 Intergenic Intergenic -93776 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr17-211 chr17 31581038 31581282 + 33.1 0.000 Intergenic (GCAG)n|Simple_repeat|Simple_repeat 5749 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr11-390 chr11 65290761 65291005 + 33.1 0.000 intron (NM_002689, intron 13 of 17) intron (NM_002689, intron 13 of 17) -23983 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr22-302 chr22 27113289 27113533 + 33.1 0.000 Intergenic Intergenic -52893 NM_001318329 284898 Hs.350813 NM_001318329 LOC284898 - uncharacterized LOC284898 protein-coding chr19-597 chr19 40443156 40443400 + 33.1 0.000 promoter-TSS (NM_013368) promoter-TSS (NM_013368) -680 NM_013368 29946 Hs.515412 NM_013368 ENSG00000167565 SERTAD3 RBT1 SERTA domain containing 3 protein-coding chr9-206 chr9 137029216 137029460 + 33.1 0.000 promoter-TSS (NM_212533) promoter-TSS (NM_212533) -416 NM_212533 20 Hs.421202 NM_001606 ENSG00000107331 ABCA2 ABC2 ATP binding cassette subfamily A member 2 protein-coding chr9-161 chr9 128552155 128552399 + 33.1 0.000 promoter-TSS (NM_001130438) promoter-TSS (NM_001130438) -310 NM_001195532 6709 Hs.372331 NM_003127 ENSG00000197694 SPTAN1 EIEE5|NEAS|SPTA2 spectrin alpha, non-erythrocytic 1 protein-coding chr7-290 chr7 41472618 41472862 + 33.1 0.000 Intergenic Intergenic -221179 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr3-313 chr3 122384141 122384385 + 33.1 0.000 promoter-TSS (NM_014367) promoter-TSS (NM_014367) 81 NM_014367 26355 Hs.584881 NM_014367 ENSG00000114023 FAM162A C3orf28|E2IG5|HGTD-P family with sequence similarity 162 member A protein-coding chr12-119 chr12 109097949 109098193 + 33.1 0.000 promoter-TSS (NM_003362) promoter-TSS (NM_003362) -101 NM_003362 7374 Hs.191334 NM_003362 ENSG00000076248 UNG DGU|HIGM4|HIGM5|UDG|UNG1|UNG15|UNG2 uracil DNA glycosylase protein-coding chr16-241 chr16 30571785 30572029 + 33.1 0.000 5' UTR (NM_145271, exon 1 of 3) 5' UTR (NM_145271, exon 1 of 3) 500 NM_001024683 146542 Hs.301463 NM_145271 ENSG00000229809 ZNF688 - zinc finger protein 688 protein-coding chr1-480 chr1 36350983 36351227 + 33.1 0.000 intron (NM_001282546, intron 6 of 10) intron (NM_001282546, intron 6 of 10) -26951 NM_018166 55194 Hs.87016 NM_018166 ENSG00000142694 EVA1B C1orf78|FAM176B eva-1 homolog B protein-coding chr1-964 chr1 203007249 203007493 + 33.1 0.000 promoter-TSS (NR_136531) promoter-TSS (NR_136531) -3 NM_138391 92703 Hs.497443 NM_138391 ENSG00000163444 TMEM183A C1orf37 transmembrane protein 183A protein-coding chr7-164 chr7 91940799 91941043 + 33.1 0.000 promoter-TSS (NM_005751) promoter-TSS (NM_005751) 46 NM_005751 10142 Hs.651221 NM_005751 ENSG00000127914 AKAP9 AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO A-kinase anchoring protein 9 protein-coding chr22-201 chr22 17910614 17910858 + 33.1 0.000 intron (NM_015241, intron 1 of 31) intron (NM_015241, intron 1 of 31) -3850 NM_001122731 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr4-61 chr4 125314830 125315074 + 33.1 0.000 Intergenic CpG -1460 NM_024582 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr3-188 chr3 193593047 193593291 + 33.1 0.000 promoter-TSS (NM_130834) promoter-TSS (NM_130834) 25 NM_130833 4976 Hs.594504 NM_015560 ENSG00000198836 OPA1 BERHS|MGM1|MTDPS14|NPG|NTG|largeG OPA1 mitochondrial dynamin like GTPase protein-coding chr4-179 chr4 146333673 146333917 + 33.1 0.000 intron (NM_001317816, intron 4 of 10) L2b|LINE|L2 -74788 NR_107003 102465837 NR_107003 ENSG00000278438 MIR7849 hsa-mir-7849 microRNA 7849 ncRNA chr8-116 chr8 81111789 81112033 + 33.1 0.000 5' UTR (NM_018440, exon 1 of 9) 5' UTR (NM_018440, exon 1 of 9) 157 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr16-300 chr16 11682725 11682969 + 33.1 0.000 intron (NR_136673, intron 9 of 9) intron (NR_136673, intron 9 of 9) 14392 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr10-368 chr10 68988705 68988949 + 33.1 0.000 promoter-TSS (NM_015634) promoter-TSS (NM_015634) 24 NM_015634 26128 Hs.279580 NM_015634 ENSG00000198954 KIF1BP KBP|KIAA1279|TTC20 KIF1 binding protein protein-coding chrX-94 chrX 46929659 46929903 + 33.1 0.000 intron (NM_014735, intron 1 of 10) intron (NM_014735, intron 1 of 10) 17360 NM_014735 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr6-69 chr6 110815506 110815750 + 33.1 0.000 promoter-TSS (NM_015076) promoter-TSS (NM_015076) 4 NM_001300963 23097 Hs.744895 NM_015076 ENSG00000155111 CDK19 CDC2L6|CDK11|bA346C16.3 cyclin dependent kinase 19 protein-coding chr11-225 chr11 64878456 64878700 + 33.1 0.000 promoter-TSS (NM_006795) promoter-TSS (NM_006795) 31 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr1-220 chr1 3543250 3543494 + 33.1 0.000 intron (NM_001409, intron 4 of 36) CpG 17418 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr12-279 chr12 62934342 62934586 + 33.1 0.000 intron (NM_020700, intron 1 of 9) CpG 686 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr4-183 chr4 185774865 185775109 + 33.1 0.000 intron (NM_001145672, intron 1 of 20) intron (NM_001145672, intron 1 of 20) 867 NM_001145673 8470 Hs.481342 NM_003603 ENSG00000154556 SORBS2 ARGBP2|PRO0618 sorbin and SH3 domain containing 2 protein-coding chr4-174 chr4 103198429 103198673 + 33.0 0.000 promoter-TSS (NM_001286734) promoter-TSS (NM_001286734) -208 NM_001813 1062 Hs.75573 NM_001813 ENSG00000138778 CENPE CENP-E|KIF10|MCPH13|PPP1R61 centromere protein E protein-coding chr12-101 chr12 949574 949818 + 33.0 0.000 promoter-TSS (NR_123713) promoter-TSS (NR_123713) -2 NM_134424 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding chr3-196 chr3 43379441 43379685 + 33.0 0.000 intron (NM_001204831, intron 11 of 12) L1PB1|LINE|L1 -27601 NR_046757 100873954 Hs.600984 NR_046757 SNRK-AS1 - SNRK antisense RNA 1 ncRNA chr4-213 chr4 87819313 87819557 + 33.0 0.000 Intergenic L1PB1|LINE|L1 -1963 NM_001184694 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding chr1-958 chr1 167820007 167820251 + 33.0 0.000 intron (NM_018417, intron 30 of 32) intron (NM_018417, intron 30 of 32) 94005 NM_001297772 55811 Hs.320892 NM_018417 ENSG00000143199 ADCY10 HCA2|HEL-S-7a|SAC|SACI|Sacy|hsAC adenylate cyclase 10 protein-coding chr19-250 chr19 11766904 11767148 + 33.0 0.000 promoter-TSS (NM_152355) promoter-TSS (NM_152355) 26 NM_152355 126068 Hs.675132 NM_152355 ENSG00000197044 ZNF441 - zinc finger protein 441 protein-coding chr7-376 chr7 23474267 23474511 + 33.0 0.000 Intergenic CpG -3898 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding chr1-557 chr1 165698564 165698808 + 33.0 0.000 promoter-TSS (NR_036683) promoter-TSS (NR_036683) -23 NM_000696 223 Hs.2533 NM_000696 ENSG00000143149 ALDH9A1 ALDH4|ALDH7|ALDH9|E3|TMABADH aldehyde dehydrogenase 9 family member A1 protein-coding chr10-188 chr10 108911789 108912033 + 33.0 0.000 Intergenic Intergenic -842618 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA chr18-116 chr18 55589842 55590086 + 33.0 0.000 promoter-TSS (NM_001369582) promoter-TSS (NM_001369582) -153 NM_001369577 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding chr11-429 chr11 65489548 65489792 + 33.0 0.000 Intergenic Intergenic -8068 NR_144567 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr7-315 chr7 5563006 5563250 + 33.0 0.000 Intergenic Intergenic -29688 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr8-355 chr8 106510170 106510414 + 33.0 0.000 intron (NM_001198532, intron 1 of 15) L2b|LINE|L2 62368 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr20-24 chr20 3680158 3680402 + 33.0 0.000 intron (NM_153202, intron 1 of 20) intron (NM_153202, intron 1 of 20) 2410 NM_153202 80332 Hs.173716 NM_025220 ENSG00000149451 ADAM33 C20orf153|DJ964F7.1 ADAM metallopeptidase domain 33 protein-coding chr9-127 chr9 131502925 131503169 + 33.0 0.000 non-coding (NR_148392, exon 1 of 21) non-coding (NR_148392, exon 1 of 21) 129 NR_148400 10585 Hs.522449 NM_007171 ENSG00000130714 POMT1 LGMD2K|LGMDR11|MDDGA1|MDDGB1|MDDGC1|RT protein O-mannosyltransferase 1 protein-coding chr10-52 chr10 12043161 12043405 + 33.0 0.000 promoter-TSS (NM_015542) promoter-TSS (NM_015542) -113 NM_080599 26019 Hs.370689 NM_015542 ENSG00000151461 UPF2 HUPF2|RENT2|smg-3 UPF2 regulator of nonsense mediated mRNA decay protein-coding chr12-284 chr12 124786677 124786921 + 33.0 0.000 intron (NR_160424, intron 10 of 11) MLT1J2|LTR|ERVL-MaLR 52872 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr3-129 chr3 150603035 150603279 + 33.0 0.000 promoter-TSS (NM_016275) promoter-TSS (NM_016275) -164 NM_016275 51714 Hs.369052 NM_016275 ENSG00000198843 SELENOT SELT selenoprotein T protein-coding chr18-60 chr18 54828450 54828694 + 33.0 0.000 promoter-TSS (NM_004163) promoter-TSS (NM_004163) 95 NM_004163 5874 Hs.25318 NM_004163 ENSG00000041353 RAB27B C25KG RAB27B, member RAS oncogene family protein-coding chr10-223 chr10 73110325 73110569 + 33.0 0.000 promoter-TSS (NM_001283019) promoter-TSS (NM_001283019) -8 NM_001283014 25961 Hs.533657 NM_015901 ENSG00000166321 NUDT13 - nudix hydrolase 13 protein-coding chr16-217 chr16 86396675 86396919 + 32.8 0.000 Intergenic Intergenic -51118 NR_024406 732275 Hs.558087 NR_024406 ENSG00000168367 LINC00917 - long intergenic non-protein coding RNA 917 ncRNA chr18-35 chr18 3261888 3262132 + 32.8 0.000 promoter-TSS (NM_001144945) promoter-TSS (NM_001144945) -103 NM_033546 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr16-230 chr16 81076838 81077082 + 32.8 0.000 intron (NM_152337, intron 1 of 3) CpG 307 NM_152337 123775 Hs.658684 NM_152337 ENSG00000166455 C16orf46 - chromosome 16 open reading frame 46 protein-coding chr11-336 chr11 67033882 67034126 + 32.8 0.000 intron (NM_001318773, intron 3 of 8) intron (NM_001318773, intron 3 of 8) 10870 NM_177963 91683 Hs.287636 NM_177963 ENSG00000173227 SYT12 SYT11|sytXII synaptotagmin 12 protein-coding chr19-334 chr19 40613822 40614066 + 32.8 0.000 exon (NM_001042545, exon 18 of 30) exon (NM_001042545, exon 18 of 30) 12575 NM_001042545 8425 Hs.466766 NM_003573 ENSG00000090006 LTBP4 ARCL1C|LTBP-4|LTBP4L|LTBP4S latent transforming growth factor beta binding protein 4 protein-coding chr8-291 chr8 27872699 27872943 + 32.8 0.000 intron (NM_173833, intron 8 of 8) intron (NM_173833, intron 8 of 8) 13295 NR_036249 100422828 NR_036249 ENSG00000265847 MIR4287 - microRNA 4287 ncRNA chr4-192 chr4 1030052 1030296 + 32.8 0.000 Intergenic Intergenic 17710 NM_021923 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr11-366 chr11 72353049 72353293 + 32.8 0.000 intron (NM_030813, intron 6 of 16) intron (NM_030813, intron 6 of 16) 81360 NM_030813 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr19-237 chr19 1168931 1169175 + 32.8 0.000 intron (NM_014963, intron 1 of 31) CpG 5215 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr2-815 chr2 238169918 238170162 + 32.8 0.000 TTS (NM_030768) TTS (NM_030768) 11070 NM_001291832 151176 Hs.24951 NM_152521 ENSG00000178752 ERFE C1QTNF15|CTRP15|FAM132B erythroferrone protein-coding chr3-388 chr3 10205688 10205932 + 32.8 0.000 intron (NM_001570, intron 3 of 12) MER113A|DNA|hAT-Charlie 40891 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr5-180 chr5 91383476 91383720 + 32.8 0.000 promoter-TSS (NM_020801) promoter-TSS (NM_020801) -281 NM_001329672 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr4-280 chr4 186621974 186622218 + 32.8 0.000 intron (NM_005245, intron 9 of 26) intron (NM_005245, intron 9 of 26) -66529 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding chr20-167 chr20 47501569 47501813 + 32.8 0.000 promoter-TSS (NM_006534) promoter-TSS (NM_006534) -196 NM_001174087 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr10-154 chr10 97334849 97335093 + 32.8 0.000 promoter-TSS (NM_012083) promoter-TSS (NM_012083) -242 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr8-59 chr8 56211613 56211857 + 32.8 0.000 promoter-TSS (NM_001114635) promoter-TSS (NM_001114635) -54 NM_001011671 79145 Hs.436913 NM_024300 ENSG00000170791 CHCHD7 COX23 coiled-coil-helix-coiled-coil-helix domain containing 7 protein-coding chr19-308 chr19 815186 815430 + 32.8 0.000 exon (NM_024888, exon 4 of 7) exon (NM_024888, exon 4 of 7) 1724 NR_036154 100422854 NR_036154 ENSG00000263414 MIR3187 mir-3187 microRNA 3187 ncRNA chr22-233 chr22 50656529 50656773 + 32.8 0.000 Intergenic ERVL-B4-int|LTR|ERVL -17991 NM_033517 85358 Hs.149035 NM_033517 ENSG00000251322 SHANK3 DEL22q13.3|PROSAP2|PSAP2|SCZD15|SPANK-2 SH3 and multiple ankyrin repeat domains 3 protein-coding chr8-143 chr8 47941912 47942156 + 32.8 0.000 intron (NM_001081640, intron 10 of 84) intron (NM_001081640, intron 10 of 84) 18102 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr19-368 chr19 14571928 14572172 + 32.8 0.000 promoter-TSS (NM_004146) promoter-TSS (NM_004146) 16 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr1-508 chr1 160206516 160206760 + 32.8 0.000 intron (NR_123725, intron 2 of 4) intron (NR_123725, intron 2 of 4) 1254 NM_001297576 8682 Hs.517216 NM_003768 ENSG00000162734 PEA15 HMAT1|HUMMAT1H|MAT1|MAT1H|PEA-15|PED|PED-PEA15|PED/PEA15 proliferation and apoptosis adaptor protein 15 protein-coding chr1-176 chr1 38859733 38859977 + 32.8 0.000 promoter-TSS (NM_001271851) promoter-TSS (NM_001271851) -83 NM_022157 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr19-211 chr19 2785325 2785569 + 32.8 0.000 promoter-TSS (NM_003249) promoter-TSS (NM_003249) -56 NM_003249 7064 Hs.78769 NM_003249 ENSG00000172009 THOP1 EP24.15|MEPD_HUMAN|MP78|TOP thimet oligopeptidase 1 protein-coding chr3-429 chr3 188179498 188179742 + 32.8 0.000 non-coding (NR_024413, exon 1 of 1) non-coding (NR_024413, exon 1 of 1) 1077 NR_024413 401105 Hs.679026 NM_207488 ENSG00000279891 FLJ42393 AVPC1948 uncharacterized LOC401105 ncRNA chr7-228 chr7 66844983 66845227 + 32.8 0.000 promoter-TSS (NR_003934) promoter-TSS (NR_003934) -279 NR_003934 729156 Hs.709878 NR_003934 ENSG00000230583 GTF2IRD1P1 - GTF2I repeat domain containing 1 pseudogene 1 pseudo chr19-431 chr19 51394242 51394486 + 32.8 0.000 Intergenic Intergenic -3773 NR_126530 147646 Hs.148344 NM_001193623 ENSG00000262874 C19orf84 - chromosome 19 open reading frame 84 protein-coding chr14-51 chr14 88792782 88793026 + 32.8 0.000 promoter-TSS (NM_183387) promoter-TSS (NM_183387) 49 NM_183387 161436 Hs.325846 NM_183387 ENSG00000165521 EML5 EMAP-2|EMAP-5 EMAP like 5 protein-coding chr3-195 chr3 42906116 42906360 + 32.8 0.000 promoter-TSS (NM_001134656) promoter-TSS (NM_001134656) 96 NM_001134656 389114 Hs.720173 NM_207404 ENSG00000182983 ZNF662 - zinc finger protein 662 protein-coding chr12-180 chr12 10213430 10213674 + 32.8 0.000 intron (NM_001363598, intron 1 of 2) intron (NM_001363598, intron 1 of 2) 675 NM_001363598 23710 Hs.524250 NM_031412 ENSG00000139112 GABARAPL1 APG8-LIKE|APG8L|ATG8|ATG8B|ATG8L|GEC1 GABA type A receptor associated protein like 1 protein-coding KN196487.1-2 KN196487.1 2965 3209 + 32.8 0.000 NA NA NA NA chr11-100 chr11 114439259 114439503 + 32.8 0.000 promoter-TSS (NM_015523) promoter-TSS (NM_015523) -86 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding chr2-971 chr2 102436974 102437218 + 32.8 0.000 intron (NM_003853, intron 5 of 11) intron (NM_003853, intron 5 of 11) 4807 NR_039930 100616157 NR_039930 ENSG00000264764 MIR4772 mir-4772 microRNA 4772 ncRNA chr10-510 chr10 69446614 69446858 + 32.8 0.000 Intergenic Intergenic -4729 NM_012339 23555 Hs.499941 NM_012339 ENSG00000099282 TSPAN15 2700063A19Rik|NET-7|NET7|TM4SF15 tetraspanin 15 protein-coding chr4-145 chr4 70688032 70688276 + 32.8 0.000 promoter-TSS (NM_020368) promoter-TSS (NM_020368) -378 NM_020368 57050 Hs.322901 NM_020368 ENSG00000132467 UTP3 CRL1|CRLZ1|SAS10 UTP3 small subunit processome component protein-coding chr5-493 chr5 141521322 141521566 + 32.7 0.000 intron (NM_001314007, intron 27 of 28) intron (NM_001314007, intron 27 of 28) 32203 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr12-177 chr12 108838370 108838614 + 32.7 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) -1486 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr11-327 chr11 5685051 5685295 + 32.7 0.000 promoter-TSS (NM_033093) promoter-TSS (NM_033093) -99 NM_033093 85363 Hs.125300 NM_033034 ENSG00000132256 TRIM5 RNF88|TRIM5alpha tripartite motif containing 5 protein-coding chr16-303 chr16 12801545 12801789 + 32.7 0.000 intron (NM_018340, intron 1 of 3) L1M5|LINE|L1 2220 NM_001099455 55313 Hs.460002 NM_018340 ENSG00000103381 CPPED1 CSTP1 calcineurin like phosphoesterase domain containing 1 protein-coding chr11-752 chr11 72865220 72865464 + 32.7 0.000 intron (NM_014824, intron 13 of 19) intron (NM_014824, intron 13 of 19) 50931 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding chr22-339 chr22 45671123 45671367 + 32.7 0.000 promoter-TSS (NM_001167621) promoter-TSS (NM_001167621) -553 NM_001167621 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding chr1-789 chr1 205889861 205890105 + 32.7 0.000 promoter-TSS (NR_046098) promoter-TSS (NR_046098) -37 NR_046098 284581 NR_046097 LOC284581 - uncharacterized LOC284581 ncRNA chr10-119 chr10 84139296 84139540 + 32.7 0.000 promoter-TSS (NM_014394) promoter-TSS (NM_014394) -91 NM_014394 27069 Hs.352656 NM_014394 ENSG00000165678 GHITM DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 growth hormone inducible transmembrane protein protein-coding chr17-32 chr17 59842625 59842869 + 32.7 0.000 TTS (NM_001329399) TTS (NM_001329399) 1481 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr2-369 chr2 171021448 171021692 + 32.7 0.000 intron (NM_001136555, intron 10 of 18) intron (NM_001136555, intron 10 of 18) 45403 NM_001136555 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chrX-120 chrX 29858790 29859034 + 32.7 0.000 intron (NM_014271, intron 6 of 10) L2|LINE|L2 284634 NR_049877 100847047 NR_049877 ENSG00000264090 MIR4666B - microRNA 4666b ncRNA chr6-153 chr6 34630086 34630330 + 32.7 0.000 intron (NM_022758, intron 2 of 3) MER44B|DNA|TcMar-Tigger -65946 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA chr12-247 chr12 78802658 78802902 + 32.7 0.000 Intergenic Intergenic -61202 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr12-298 chr12 57459036 57459280 + 32.7 0.000 promoter-TSS (NM_001167609) promoter-TSS (NM_001167609) -627 NM_005269 2735 Hs.632702 NM_005269 ENSG00000111087 GLI1 GLI|PAPA8|PPD1 GLI family zinc finger 1 protein-coding chrX-37 chrX 91434777 91435021 + 32.7 0.000 promoter-TSS (NM_080832) promoter-TSS (NM_080832) 60 NM_080832 140886 Hs.246590 NM_080832 ENSG00000174740 PABPC5 PABP5 poly(A) binding protein cytoplasmic 5 protein-coding chr6-215 chr6 136593929 136594173 + 32.7 0.000 intron (NM_005923, intron 21 of 29) intron (NM_005923, intron 21 of 29) -35063 NR_125858 101928461 Hs.666518 NR_125858 LOC101928461 - uncharacterized LOC101928461 ncRNA chr2-149 chr2 108534018 108534262 + 32.5 0.000 promoter-TSS (NM_001193483) promoter-TSS (NM_001193483) 79 NR_135290 644903 NM_032658 ENSG00000214184 GCC2-AS1 - GCC2 antisense RNA 1 ncRNA chr22-135 chr22 42614686 42614930 + 32.5 0.000 promoter-TSS (NM_032311) promoter-TSS (NM_032311) 75 NM_001363052 84271 Hs.505802 NM_032311 ENSG00000100227 POLDIP3 PDIP3|PDIP46|SKAR DNA polymerase delta interacting protein 3 protein-coding chr8-293 chr8 29513422 29513666 + 32.5 0.000 Intergenic Intergenic -162860 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr10-180 chr10 86693921 86694165 + 32.5 0.000 intron (NM_001368064, intron 7 of 12) intron (NM_001368064, intron 7 of 12) 25479 NM_001080116 11155 Hs.657271 NM_007078 ENSG00000122367 LDB3 CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP LIM domain binding 3 protein-coding chr1-322 chr1 206685985 206686229 + 32.5 0.000 intron (NM_004759, intron 1 of 9) CpG 1202 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr14-113 chr14 54441205 54441449 + 32.5 0.000 promoter-TSS (NM_005776) promoter-TSS (NM_005776) 47 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr4-233 chr4 15681394 15681638 + 32.5 0.000 promoter-TSS (NM_001145191) promoter-TSS (NM_001145191) -311 NM_001145191 285550 Hs.399980 NM_001145191 ENSG00000237765 FAM200B C4orf53 family with sequence similarity 200 member B protein-coding chr15-239 chr15 77496686 77496930 + 32.5 0.000 Intergenic Intergenic -28787 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr1-597 chr1 100133028 100133272 + 32.5 0.000 promoter-TSS (NR_135078) promoter-TSS (NR_135078) 0 NR_135078 54482 Hs.729095 NM_019083 ENSG00000122435 TRMT13 CCDC76 tRNA methyltransferase 13 homolog protein-coding chr17-539 chr17 2687001 2687245 + 32.5 0.000 Intergenic MER5A1|DNA|hAT-Charlie 5796 NR_106834 102465465 NR_106834 ENSG00000273606 MIR6776 hsa-mir-6776 microRNA 6776 ncRNA chr14-279 chr14 102850037 102850281 + 32.5 0.000 intron (NM_145725, intron 2 of 11) intron (NM_145725, intron 2 of 11) -72497 NM_030943 81693 Hs.534494 NM_030943 ENSG00000166126 AMN PRO1028|amnionless amnion associated transmembrane protein protein-coding chr10-232 chr10 131900536 131900780 + 32.5 0.000 promoter-TSS (NM_001291310) promoter-TSS (NM_001291310) -350 NR_033191 55844 Hs.380372 NM_018461 ENSG00000175470 PPP2R2D B55D|B55delta|MDS026 protein phosphatase 2 regulatory subunit Bdelta protein-coding chr5-246 chr5 150399546 150399790 + 32.5 0.000 TTS (NM_001364084) TTS (NM_001364084) 13088 NR_157074 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr1-662 chr1 192700817 192701061 + 32.5 0.000 Intergenic Intergenic -15389 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr10-387 chr10 4704249 4704493 + 32.5 0.000 Intergenic Intergenic -26301 NR_024475 100216001 Hs.634869 NR_024475 ENSG00000231298 MANCR LINC00704 mitotically associated long non coding RNA ncRNA chr9-474 chr9 70677451 70677695 + 32.5 0.000 intron (NM_001366143, intron 9 of 25) MER39|LTR|ERV1 132511 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA chr3-363 chr3 187783204 187783448 + 32.5 0.000 Intergenic MIRc|SINE|MIR -37858 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr5-294 chr5 138575529 138575773 + 32.5 0.000 promoter-TSS (NM_004134) promoter-TSS (NM_004134) -250 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr6-347 chr6 26033518 26033762 + 32.5 0.000 promoter-TSS (NM_003513) promoter-TSS (NM_003513) -72 NM_003513 8335 Hs.248174 NM_003513 ENSG00000278463 HIST1H2AB H2A/m|H2AFM histone cluster 1 H2A family member b protein-coding chr1-417 chr1 52056119 52056363 + 32.5 0.000 promoter-TSS (NR_046405) promoter-TSS (NR_046405) -54 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr5-206 chr5 73365489 73365733 + 32.5 0.000 Intergenic Intergenic 27705 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr3-358 chr3 176373342 176373586 + 32.5 0.000 Intergenic L1MA5A|LINE|L1 128913 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA chr6-209 chr6 53815735 53815979 + 32.5 0.000 intron (NM_018214, intron 1 of 13) intron (NM_018214, intron 1 of 13) 20852 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding chr6-75 chr6 13813631 13813875 + 32.5 0.000 intron (NM_001031713, intron 1 of 8) CpG 807 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr7-385 chr7 69817128 69817372 + 32.5 0.000 intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 218775 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr3-168 chr3 58433677 58433921 + 32.5 0.000 promoter-TSS (NM_000925) promoter-TSS (NM_000925) 33 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr6-183 chr6 151431490 151431734 + 32.4 0.000 intron (NM_001271937, intron 3 of 10) MER33|DNA|hAT-Charlie 20514 NM_017909 55005 Hs.486835 NM_017909 ENSG00000155906 RMND1 C6orf96|COXPD11|RMD1|bA351K16|bA351K16.3 required for meiotic nuclear division 1 homolog protein-coding chr19-384 chr19 8513770 8514014 + 32.4 0.000 intron (NM_032370, intron 1 of 5) CpG 275 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr10-256 chr10 14173791 14174035 + 32.4 0.000 intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 99629 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA chr7-195 chr7 77536704 77536948 + 32.4 0.000 promoter-TSS (NM_002835) promoter-TSS (NM_002835) -469 NM_002835 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr8-392 chr8 48370159 48370403 + 32.4 0.000 Intergenic L1MD2|LINE|L1 -181286 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr7-127 chr7 27739945 27740189 + 32.4 0.000 promoter-TSS (NM_001362795) promoter-TSS (NM_001362795) -28 NM_001079864 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr2-1010 chr2 187217855 187218099 + 32.4 0.000 Intergenic Intergenic 230275 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr10-127 chr10 30736821 30737065 + 32.4 0.000 Intergenic Intergenic 13724 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr7-133 chr7 149239493 149239737 + 32.4 0.000 promoter-TSS (NM_012256) promoter-TSS (NM_012256) -36 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr9-263 chr9 136109460 136109704 + 32.4 0.000 Intergenic Intergenic 8849 NM_001256526 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr7-248 chr7 98854069 98854313 + 32.4 0.000 intron (NM_152913, intron 5 of 7) AluSx|SINE|Alu 15823 NM_001134450 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr16-258 chr16 53435452 53435696 + 32.4 0.000 promoter-TSS (NM_001323611) promoter-TSS (NM_001323611) -45 NM_001323611 5934 Hs.513609 NM_005611 ENSG00000103479 RBL2 P130|Rb2 RB transcriptional corepressor like 2 protein-coding chr22-174 chr22 21652239 21652483 + 32.4 0.000 promoter-TSS (NR_030622) promoter-TSS (NR_030622) -620 NR_030622 100126318 NR_030622 ENSG00000212102 MIR301B MIRN301B|mir-301b microRNA 301b ncRNA chr7-789 chr7 130292871 130293115 + 32.4 0.000 promoter-TSS (NM_001163446) promoter-TSS (NM_001163446) -141 NM_016352 51200 Hs.93764 NM_016352 ENSG00000128510 CPA4 CPA3 carboxypeptidase A4 protein-coding chr4-329 chr4 85681440 85681684 + 32.4 0.000 intron (NM_001025616, intron 2 of 9) intron (NM_001025616, intron 2 of 9) -40906 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA chr14-182 chr14 54562511 54562755 + 32.4 0.000 Intergenic Intergenic -4979 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr7-378 chr7 30750960 30751204 + 32.4 0.000 Intergenic Intergenic -1053 NR_037598 100526825 Hs.660192 NR_037598 ENSG00000254959 INMT-MINDY4 INMT-FAM188B INMT-MINDY4 readthrough (NMD candidate) ncRNA chr1-347 chr1 3369583 3369827 + 32.4 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) -84960 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr1-1050 chr1 85708200 85708444 + 32.4 0.000 5' UTR (NM_001170670, exon 1 of 11) 5' UTR (NM_001170670, exon 1 of 11) 111 NM_001170670 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr4-246 chr4 152590339 152590583 + 32.4 0.000 Intergenic Intergenic 54033 NR_039658 100616193 NR_039658 ENSG00000283792 MIR4453 - microRNA 4453 ncRNA chr6-120 chr6 135497531 135497775 + 32.4 0.000 promoter-TSS (NM_001134831) promoter-TSS (NM_001134831) 87 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding chrX-40 chrX 56233720 56233964 + 32.4 0.000 intron (NM_001324099, intron 1 of 3) intron (NM_001324099, intron 1 of 3) 684 NM_001324100 11279 Hs.646614 NM_007250 ENSG00000102349 KLF8 BKLF3|ZNF741 Kruppel like factor 8 protein-coding chr4-80 chr4 128061033 128061277 + 32.2 0.000 promoter-TSS (NM_032239) promoter-TSS (NM_032239) -157 NM_001350531 55132 Hs.654971 NM_018078 ENSG00000138709 LARP1B LARP2 La ribonucleoprotein domain family member 1B protein-coding chr6-353 chr6 52352376 52352620 + 32.2 0.000 Intergenic Intergenic -9653 NM_133367 85315 Hs.239388 NM_133367 ENSG00000170915 PAQR8 C6orf33|LMPB1|MPRB progestin and adipoQ receptor family member 8 protein-coding chr8-339 chr8 38382388 38382632 + 32.2 0.000 promoter-TSS (NM_017778) promoter-TSS (NM_017778) -238 NM_017778 54904 Hs.434966 NM_017778 ENSG00000147548 NSD3 KMT3F|KMT3G|WHISTLE|WHSC1L1|pp14328 nuclear receptor binding SET domain protein 3 protein-coding chr18-69 chr18 8859254 8859498 + 32.2 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 141995 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding chr19-557 chr19 40147598 40147842 + 32.2 0.000 Intergenic Intergenic -43706 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chr9-640 chr9 22040926 22041170 + 32.2 0.000 intron (NR_003529, intron 3 of 18) intron (NR_003529, intron 3 of 18) -31735 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr2-198 chr2 223957237 223957481 + 32.2 0.000 promoter-TSS (NM_022915) promoter-TSS (NM_022915) -104 NM_022915 65080 Hs.203559 NM_022915 ENSG00000135900 MRPL44 COXPD16|L44MT|MRP-L44 mitochondrial ribosomal protein L44 protein-coding chr17-669 chr17 948507 948751 + 32.2 0.000 intron (NM_022463, intron 1 of 7) MER5B|DNA|hAT-Charlie 31147 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-733 chr1 222654882 222655126 + 32.2 0.000 intron (NM_001300867, intron 13 of 22) intron (NM_001300867, intron 13 of 22) 10701 NM_001300867 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding chr16-194 chr16 30558321 30558565 + 32.2 0.000 promoter-TSS (NM_001172679) promoter-TSS (NM_001172679) -69 NM_033410 92595 Hs.132227 NM_033410 ENSG00000169951 ZNF764 - zinc finger protein 764 protein-coding chr12-209 chr12 49945557 49945801 + 32.2 0.000 Intergenic LTR85c|LTR|Gypsy? -5062 NM_000486 359 Hs.130730 NM_000486 ENSG00000167580 AQP2 AQP-CD|WCH-CD aquaporin 2 protein-coding chr7-300 chr7 131188657 131188901 + 32.2 0.000 intron (NM_001145354, intron 2 of 18) intron (NM_001145354, intron 2 of 18) 78685 NM_001145354 4289 Hs.44693 NM_013255 ENSG00000128585 MKLN1 TWA2 muskelin 1 protein-coding chr19-298 chr19 7920355 7920599 + 32.2 0.000 promoter-TSS (NR_030717) promoter-TSS (NR_030717) 139 NM_003083 6618 Hs.631860 NM_003083 ENSG00000104976 SNAPC2 PTFDELTA|SNAP45 small nuclear RNA activating complex polypeptide 2 protein-coding chr10-160 chr10 124736396 124736640 + 32.2 0.000 intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 7860 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr1-272 chr1 62688217 62688461 + 32.2 0.000 promoter-TSS (NM_001272001) promoter-TSS (NM_001272001) 29 NM_001272000 85440 Hs.744927 NM_033407 ENSG00000116641 DOCK7 EIEE23|ZIR2 dedicator of cytokinesis 7 protein-coding KI270729.1-4 KI270729.1 27695 27939 + 32.2 0.000 NA NA NA NA chr7-244 chr7 66205164 66205408 + 32.2 0.000 promoter-TSS (NM_003596) promoter-TSS (NM_003596) -48 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr22-187 chr22 46739094 46739338 + 32.2 0.000 promoter-TSS (NM_022766) promoter-TSS (NM_022766) -964 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr7-576 chr7 80897189 80897433 + 32.2 0.000 intron (NM_006379, intron 2 of 17) intron (NM_006379, intron 2 of 17) 21740 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr8-213 chr8 68967869 68968113 + 32.2 0.000 intron (NR_039986, intron 2 of 4) intron (NR_039986, intron 2 of 4) 136199 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr6-47 chr6 157669740 157669984 + 32.1 0.000 intron (NM_153746, intron 8 of 8) intron (NM_153746, intron 8 of 8) 140730 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr3-264 chr3 13544647 13544891 + 32.1 0.000 Intergenic Intergenic -4356 NM_001004019 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr2-608 chr2 53880932 53881176 + 32.1 0.000 intron (NM_014614, intron 41 of 46) intron (NM_014614, intron 41 of 46) -21021 NM_001164165 100302652 Hs.40763 NM_001164165 ENSG00000270898 GPR75-ASB3 ASB-3|ASB3 GPR75-ASB3 readthrough protein-coding chr14-85 chr14 68940031 68940275 + 32.1 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 39149 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chrX-53 chrX 14873073 14873317 + 32.1 0.000 promoter-TSS (NM_001330241) promoter-TSS (NM_001330241) -126 NM_152633 2187 Hs.554740 NM_152633 ENSG00000181544 FANCB FA2|FAAP90|FAAP95|FAB|FACB FA complementation group B protein-coding chr1-432 chr1 248906148 248906392 + 32.1 0.000 promoter-TSS (NM_001017434) promoter-TSS (NM_001017434) 27 NM_001017434 267002 Hs.602037 NM_170725 ENSG00000185220 PGBD2 - piggyBac transposable element derived 2 protein-coding chr8-114 chr8 143388671 143388915 + 32.1 0.000 Intergenic Intergenic 19917 NM_052924 114822 Hs.521912 NM_052924 ENSG00000158106 RHPN1 ODF5|RHOPHILIN|RHPN rhophilin Rho GTPase binding protein 1 protein-coding chr20-117 chr20 36236276 36236520 + 32.1 0.000 promoter-TSS (NM_001271874) promoter-TSS (NM_001271874) -19 NM_015511 25980 Hs.11314 NM_015511 ENSG00000131043 AAR2 C20orf4|CGI-23 AAR2 splicing factor protein-coding chr1-571 chr1 234487015 234487259 + 32.1 0.000 Intergenic Intergenic -7958 NM_005646 6894 Hs.498115 NM_005646 ENSG00000059588 TARBP1 TRM3|TRMT3|TRP-185|TRP185 TAR (HIV-1) RNA binding protein 1 protein-coding chr9-139 chr9 32644805 32645049 + 32.1 0.000 Intergenic Intergenic -9258 NM_153809 138474 Hs.591086 NM_153809 ENSG00000122728 TAF1L TAF(II)210|TAF2A2 TATA-box binding protein associated factor 1 like protein-coding chr17-149 chr17 74988045 74988289 + 32.1 0.000 intron (NM_014603, intron 1 of 4) CpG 535 NM_014603 30850 Hs.78358 NM_014603 ENSG00000109089 CDR2L HUMPPA cerebellar degeneration related protein 2 like protein-coding chr19-447 chr19 11987482 11987726 + 32.1 0.000 promoter-TSS (NR_134930) promoter-TSS (NR_134930) -13 NR_134929 101928464 Hs.631643 NR_134927 ENSG00000219665 ZNF433-AS1 - ZNF433 and ZNF878 antisense RNA 1 ncRNA chr6-138 chr6 24721116 24721360 + 32.1 0.000 Intergenic CpG -2084 NM_030939 81688 Hs.744857 NM_030939 ENSG00000112308 C6orf62 Nbla00237|XTP12|dJ30M3.2 chromosome 6 open reading frame 62 protein-coding chr7-351 chr7 106009738 106009982 + 32.1 0.000 intron (NM_152750, intron 8 of 18) intron (NM_152750, intron 8 of 18) 46596 NM_152750 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr11-938 chr11 93895348 93895592 + 32.1 0.000 Intergenic Intergenic -44852 NM_001144871 387804 Hs.512252 NM_001144871 ENSG00000214376 VSTM5 C11orf90 V-set and transmembrane domain containing 5 protein-coding chr7-202 chr7 2659768 2660012 + 32.1 0.000 intron (NM_025250, intron 13 of 13) intron (NM_025250, intron 13 of 13) -19632 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr12-56 chr12 56300281 56300525 + 32.1 0.000 promoter-TSS (NM_004077) promoter-TSS (NM_004077) -73 NM_004077 1431 Hs.743252 NM_004077 ENSG00000062485 CS - citrate synthase protein-coding chr2-801 chr2 223761039 223761283 + 32.1 0.000 intron (NR_110905, intron 5 of 5) Tigger10|DNA|TcMar-Tigger 76421 NM_001039569 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr6-239 chr6 4018385 4018629 + 31.9 0.000 Intergenic CpG -2793 NR_146785 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding chr19-515 chr19 33879964 33880208 + 31.9 0.000 Intergenic Intergenic 83216 NM_001129994 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr10-185 chr10 101032642 101032886 + 31.9 0.000 intron (NM_030971, intron 2 of 11) (TGTG)n|Simple_repeat|Simple_repeat 1525 NM_030971 81855 Hs.283844 NM_030971 ENSG00000107819 SFXN3 BA108L7.2|SFX3|SLC56A3 sideroflexin 3 protein-coding chr17-270 chr17 81200884 81201128 + 31.9 0.000 intron (NM_001319228, intron 7 of 25) L1ME2|LINE|L1 21959 NM_001319228 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr4-251 chr4 1238275 1238519 + 31.9 0.000 intron (NM_001328, intron 1 of 8) CpG-20811 10733 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr11-164 chr11 8964294 8964538 + 31.9 0.000 promoter-TSS (NR_073431) promoter-TSS (NR_073431) 26 NM_020644 56674 Hs.501853 NM_020644 ENSG00000175348 TMEM9B C11orf15 TMEM9 domain family member B protein-coding chrX-23 chrX 129982476 129982720 + 31.9 0.000 Intergenic CpG -22590 NM_001184772 63035 Hs.496748 NM_021946 ENSG00000085185 BCORL1 BCoR-L1|CXorf10 BCL6 corepressor like 1 protein-coding chr6-438 chr6 166046260 166046504 + 31.9 0.000 Intergenic Intergenic -51338 NR_147704 729681 Hs.520550 NR_147704 LOC729681 - uncharacterized LOC729681 ncRNA chr11-350 chr11 10750964 10751208 + 31.9 0.000 promoter-TSS (NM_001346279) promoter-TSS (NM_001346279) -160 NM_014633 9646 Hs.725151 NM_014633 ENSG00000198730 CTR9 SH2BP1|TSBP|p150|p150TSP CTR9 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-286 chr3 126703971 126704215 + 31.9 0.000 promoter-TSS (NM_001320610) promoter-TSS (NM_001320610) -147 NM_032343 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr3-350 chr3 138079013 138079257 + 31.9 0.000 intron (NM_001170538, intron 11 of 13) intron (NM_001170538, intron 11 of 13) 34345 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr17-250 chr17 75775281 75775525 + 31.9 0.000 Intergenic Intergenic 4376 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding chr5-201 chr5 13632679 13632923 + 31.9 0.000 Intergenic LTR33A|LTR|ERVL 311679 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr7-405 chr7 151503921 151504165 + 31.9 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 15852 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr1-473 chr1 25338224 25338468 + 31.9 0.000 promoter-TSS (NM_001321772) promoter-TSS (NM_001321772) 12 NM_014313 23585 Hs.705699 NM_014313 ENSG00000183726 TMEM50A IFNRC|SMP1 transmembrane protein 50A protein-coding chr15-124 chr15 39624765 39625009 + 31.9 0.000 intron (NM_152597, intron 10 of 11) intron (NM_152597, intron 10 of 11) 43808 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr16-329 chr16 970392 970636 + 31.9 0.000 intron (NM_001352017, intron 1 of 11) CpG 470 NM_001352021 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr4-318 chr4 49511058 49511302 + 31.9 0.000 Intergenic Intergenic 524538 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr12-300 chr12 63045388 63045632 + 31.9 0.000 Intergenic Intergenic 107300 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding chr5-136 chr5 150409750 150409994 + 31.9 0.000 intron (NR_157074, intron 1 of 6) intron (NR_157074, intron 1 of 6) 2884 NR_157074 972 Hs.436568 NM_004355 ENSG00000019582 CD74 DHLAG|HLADG|II|Ia-GAMMA|p33 CD74 molecule protein-coding chr7-250 chr7 112510383 112510627 + 31.9 0.000 Intergenic Intergenic 29514 NM_182597 286006 Hs.396189 NM_182597 ENSG00000181016 LSMEM1 C7orf53 leucine rich single-pass membrane protein 1 protein-coding chr1-968 chr1 211327476 211327720 + 31.9 0.000 intron (NM_001319207, intron 1 of 10) intron (NM_001319207, intron 1 of 10) 765 NM_001033910 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr1-335 chr1 113979276 113979520 + 31.9 0.000 promoter-TSS (NM_001286353) promoter-TSS (NM_001286353) 7 NM_001286353 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr12-345 chr12 108696445 108696689 + 31.9 0.000 intron (NM_001105237, intron 2 of 10) intron (NM_001105237, intron 2 of 10) 6431 NM_001105237 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr10-397 chr10 33365823 33366067 + 31.9 0.000 Intergenic LTR26|LTR|ERV1 -31040 NM_001024628 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr11-172 chr11 393309 393553 + 31.9 0.000 promoter-TSS (NM_007183) promoter-TSS (NM_007183) -778 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr1-857 chr1 96416128 96416372 + 31.9 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -42125 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr2-178 chr2 147844054 147844298 + 31.9 0.000 promoter-TSS (NM_001616) promoter-TSS (NM_001616) -341 NM_001278579 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr10-290 chr10 60778231 60778475 + 31.9 0.000 promoter-TSS (NM_001170406) promoter-TSS (NM_001170406) 22 NM_001170406 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding chr4-66 chr4 7207155 7207399 + 31.9 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) 14739 NM_020777 57537 Hs.479099 NM_020777 ENSG00000184985 SORCS2 - sortilin related VPS10 domain containing receptor 2 protein-coding chr11-413 chr11 6992681 6992925 + 31.9 0.000 Intergenic Intergenic 27543 NR_148988 7761 Hs.445849 NM_013249 ENSG00000149050 ZNF214 BAZ-1|BAZ1 zinc finger protein 214 protein-coding chr20-276 chr20 47546353 47546597 + 31.8 0.000 intron (NM_181659, intron 1 of 22) L2a|LINE|L2 44588 NM_181659 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr6-119 chr6 113971154 113971398 + 31.8 0.000 promoter-TSS (NR_073443) promoter-TSS (NR_073443) -128 NM_001527 3066 Hs.3352 NM_001527 ENSG00000196591 HDAC2 HD2|KDAC2|RPD3|YAF1 histone deacetylase 2 protein-coding chr3-351 chr3 139534238 139534482 + 31.8 0.000 intron (NM_001130992, intron 2 of 2) intron (NM_001130992, intron 2 of 2) 5276 NM_001365940 5947 Hs.529571 NM_002899 ENSG00000114115 RBP1 CRABP-I|CRBP|CRBP1|CRBPI|RBPC retinol binding protein 1 protein-coding chr2-400 chr2 109644395 109644639 + 31.8 0.000 Intergenic Intergenic 30153 NM_023016 65124 Hs.355455 NM_023016 ENSG00000198142 SOWAHC ANKRD57|C2orf26 sosondowah ankyrin repeat domain family member C protein-coding chr1-430 chr1 241357061 241357305 + 31.8 0.000 promoter-TSS (NM_001282773) promoter-TSS (NM_001282773) 22 NM_001364886 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding chr11-724 chr11 46475326 46475570 + 31.8 0.000 intron (NM_001267782, intron 13 of 19) intron (NM_001267782, intron 13 of 19) -23559 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr22-193 chr22 29093663 29093907 + 31.8 0.000 intron (NM_001039570, intron 1 of 8) intron (NM_001039570, intron 1 of 8) 20750 NM_032045 83999 Hs.229335 NM_032045 ENSG00000183762 KREMEN1 ECTD13|KREMEN|KRM1 kringle containing transmembrane protein 1 protein-coding chr5-150 chr5 132215339 132215583 + 31.8 0.000 intron (NM_001365681, intron 4 of 13) intron (NM_001365681, intron 4 of 13) 2457 NR_106888 102465498 NR_106888 ENSG00000283678 MIR6830 hsa-mir-6830 microRNA 6830 ncRNA chr1-1066 chr1 150233423 150233667 + 31.8 0.000 intron (NM_001280560, intron 1 of 4) intron (NM_001280560, intron 1 of 4) 1133 NM_001136479 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr22-122 chr22 41565489 41565733 + 31.8 0.000 intron (NM_014460, intron 1 of 3) AluJb|SINE|Alu 4601 NM_014460 27254 Hs.310893 NM_014460 ENSG00000172346 CSDC2 PIPPIN|dJ347H13.2 cold shock domain containing C2 protein-coding chr20-54 chr20 52191632 52191876 + 31.8 0.000 promoter-TSS (NM_022088) promoter-TSS (NM_022088) 25 NM_018197 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr10-332 chr10 97542394 97542638 + 31.8 0.000 intron (NM_024954, intron 1 of 2) intron (NM_024954, intron 1 of 2) -29925 NM_001291218 26287 Hs.73708 NM_020349 ENSG00000165887 ANKRD2 ARPP ankyrin repeat domain 2 protein-coding chr9-194 chr9 36625186 36625430 + 31.8 0.000 intron (NM_001256691, intron 6 of 15) intron (NM_001256691, intron 6 of 15) 52413 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr2-488 chr2 31270832 31271076 + 31.8 0.000 Intergenic Intergenic 36802 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr12-189 chr12 7498817 7499061 + 31.8 0.000 exon (NM_004244, exon 4 of 17) exon (NM_004244, exon 4 of 17) 4838 NM_001370146 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding chr16-376 chr16 87464661 87464905 + 31.8 0.000 intron (NM_015144, intron 1 of 12) intron (NM_015144, intron 1 of 12) 27071 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr19-474 chr19 56393376 56393620 + 31.8 0.000 promoter-TSS (NR_037159) promoter-TSS (NR_037159) 36 NM_144690 147948 Hs.244391 NM_144690 ENSG00000018869 ZNF582 - zinc finger protein 582 protein-coding chr10-65 chr10 80079055 80079299 + 31.8 0.000 promoter-TSS (NR_027428) promoter-TSS (NR_027428) 16 NR_027428 219347 Hs.524453 NR_027428 TMEM254-AS1 - TMEM254 antisense RNA 1 ncRNA chr20-38 chr20 17681254 17681498 + 31.8 0.000 intron (NM_001365613, intron 1 of 24) CpG 866 NM_001365613 6238 Hs.472213 NM_004587 ENSG00000125844 RRBP1 ES/130|ES130|RRp|hES ribosome binding protein 1 protein-coding chr1-278 chr1 180912275 180912519 + 31.8 0.000 promoter-TSS (NM_020950) promoter-TSS (NM_020950) -500 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding chr11-323 chr11 126585932 126586176 + 31.8 0.000 intron (NM_001301097, intron 1 of 15) AmnSINE1|SINE|5S-Deu-L2 -66724 NR_120532 101929427 Hs.600341 NR_120532 ENSG00000254607 LOC101929427 - uncharacterized LOC101929427 ncRNA chr11-261 chr11 65961440 65961684 + 31.8 0.000 promoter-TSS (NM_005146) promoter-TSS (NM_005146) -172 NM_005146 9092 Hs.502883 NM_005146 ENSG00000175467 SART1 Ara1|HAF|HOMS1|SART1259|SNRNP110|Snu66 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP protein-coding chr16-324 chr16 88755741 88755985 + 31.8 0.000 intron (NM_001142864, intron 1 of 50) intron (NM_001142864, intron 1 of 50) 13096 NR_120387 339059 Hs.449817 NR_120387 ENSG00000182376 LOC339059 - uncharacterized LOC339059 ncRNA chr14-204 chr14 103594419 103594663 + 31.8 0.000 Intergenic Intergenic 31581 NM_001302654 84334 Hs.598441 NM_001302652 ENSG00000256053 COA8 APOP|APOP1|APOPT1|C14orf153 cytochrome c oxidase assembly factor 8 protein-coding chr16-121 chr16 67174103 67174347 + 31.8 0.000 exon (NM_001276311, exon 2 of 4) exon (NM_001276311, exon 2 of 4) 372 NM_001276311 8996 Hs.513667 NM_003946 ENSG00000140939 NOL3 ARC|FCM|MYOCL1|MYP|NOP|NOP30 nucleolar protein 3 protein-coding chr7-270 chr7 101321923 101322167 + 31.8 0.000 promoter-TSS (NM_001287525) promoter-TSS (NM_001287525) -222 NM_001287526 64792 Hs.389104 NM_022777 ENSG00000128581 IFT22 RABL5 intraflagellar transport 22 protein-coding chr1-110 chr1 16206548 16206792 + 31.8 0.000 intron (NM_153213, intron 6 of 15) CpG 5982 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr17-158 chr17 75779793 75780037 + 31.8 0.000 promoter-TSS (NM_005324) promoter-TSS (NM_005324) -136 NM_005324 3021 Hs.180877 NM_005324 ENSG00000132475 H3F3B H3.3B H3 histone family member 3B protein-coding chr11-711 chr11 28621886 28622130 + 31.8 0.000 Intergenic Intergenic -144460 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr1-483 chr1 42924164 42924408 + 31.6 0.000 Intergenic CpG 34582 NM_006516 6513 Hs.473721 NM_006516 ENSG00000117394 SLC2A1 CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN solute carrier family 2 member 1 protein-coding chr6-307 chr6 41895415 41895659 + 31.6 0.000 promoter-TSS (NM_018561) promoter-TSS (NM_018561) -162 NM_018561 25862 Hs.593575 NM_018561 ENSG00000164663 USP49 - ubiquitin specific peptidase 49 protein-coding chr1-226 chr1 24745151 24745395 + 31.6 0.000 promoter-TSS (NM_013943) promoter-TSS (NM_013943) -174 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr2-802 chr2 224485415 224485659 + 31.6 0.000 intron (NM_001257197, intron 12 of 14) L1P3|LINE|L1 -83430 NM_001122779 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding chr22-126 chr22 19447536 19447780 + 31.6 0.000 intron (NM_173793, intron 1 of 2) CpG-18749 574 NM_001166242 128977 Hs.659565 NM_173793 ENSG00000242259 C22orf39 - chromosome 22 open reading frame 39 protein-coding chr5-109 chr5 19988113 19988357 + 31.6 0.000 promoter-TSS (NM_001349563) promoter-TSS (NM_001349563) -35 NM_001349560 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr19-264 chr19 33521820 33522064 + 31.6 0.000 promoter-TSS (NM_000285) promoter-TSS (NM_000285) -151 NM_000285 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr15-159 chr15 95972333 95972577 + 31.6 0.000 Intergenic Intergenic 155386 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr19-451 chr19 17226391 17226635 + 31.6 0.000 intron (NM_024578, intron 1 of 5) CpG 287 NM_024578 79629 Hs.422676 NM_024578 ENSG00000099330 OCEL1 FWP009|S863-9 occludin/ELL domain containing 1 protein-coding chr22-117 chr22 46484932 46485176 + 31.6 0.000 intron (NM_014246, intron 1 of 34) intron (NM_014246, intron 1 of 34) 52566 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr1-652 chr1 115546263 115546507 + 31.6 0.000 Intergenic MER102c|DNA|hAT-Charlie -95585 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr2-485 chr2 20447633 20447877 + 31.6 0.000 exon (NM_004040, exon 1 of 1) exon (NM_004040, exon 1 of 1) 681 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr7-89 chr7 102512656 102512900 + 31.6 0.000 intron (NM_001277335, intron 1 of 19) intron (NM_001277335, intron 1 of 19) 4999 NM_001277335 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr2-658 chr2 229815504 229815748 + 31.6 0.000 intron (NM_001348330, intron 9 of 41) intron (NM_001348330, intron 9 of 41) -101071 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr17-337 chr17 19331234 19331478 + 31.6 0.000 intron (NM_014964, intron 9 of 10) intron (NM_014964, intron 9 of 10) 13218 NR_031591 100302256 NR_031591 ENSG00000221540 MIR1180 MIRN1180|hsa-mir-1180|mir-1180 microRNA 1180 ncRNA chr15-115 chr15 62606447 62606691 + 31.6 0.000 Intergenic Intergenic 38612 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chr7-61 chr7 2631648 2631892 + 31.6 0.000 promoter-TSS (NM_025250) promoter-TSS (NM_025250) -216 NM_025250 80727 Hs.440899 NM_025250 ENSG00000136295 TTYH3 - tweety family member 3 protein-coding chr4-286 chr4 5758761 5759005 + 31.6 0.000 TTS (NM_001306092) TTS (NM_001306092) 47682 NM_153717 2121 Hs.646899 NM_014556 ENSG00000072840 EVC DWF-1|EVC1|EVCL EvC ciliary complex subunit 1 protein-coding chr1-753 chr1 25182607 25182851 + 31.6 0.000 Intergenic Intergenic 49773 NM_207170 25949 Hs.20013 NM_015484 ENSG00000117614 SYF2 CBPIN|NTC31|P29|fSAP29 SYF2 pre-mRNA splicing factor protein-coding chr1-454 chr1 236065026 236065270 + 31.6 0.000 promoter-TSS (NM_002508) promoter-TSS (NM_002508) -58 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr13-96 chr13 98653366 98653610 + 31.6 0.000 Intergenic Intergenic 76233 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr16-175 chr16 28863564 28863808 + 31.6 0.000 promoter-TSS (NM_001308294) promoter-TSS (NM_001308294) -71 NM_001308294 25970 Hs.15744 NM_015503 ENSG00000178188 SH2B1 PSM|SH2B SH2B adaptor protein 1 protein-coding chr9-438 chr9 124357457 124357701 + 31.6 0.000 non-coding (NR_027406, exon 1 of 1) non-coding (NR_027406, exon 1 of 1) 4106 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr17-460 chr17 78356342 78356586 + 31.6 0.000 TTS (NM_003955) TTS (NM_003955) 3615 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr8-186 chr8 22658958 22659202 + 31.6 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) 10041 NM_018688 55909 Hs.433722 NM_018688 ENSG00000147439 BIN3 - bridging integrator 3 protein-coding chr4-262 chr4 40255144 40255388 + 31.6 0.000 Intergenic Intergenic -51919 NR_121641 101060498 Hs.351492 NR_121640 ENSG00000249241 LINC02265 - long intergenic non-protein coding RNA 2265 ncRNA chr19-471 chr19 49451786 49452030 + 31.6 0.000 promoter-TSS (NM_017916) promoter-TSS (NM_017916) -94 NM_017916 55011 Hs.5245 NM_017916 ENSG00000104872 PIH1D1 NOP17|Pih1 PIH1 domain containing 1 protein-coding chr5-266 chr5 78984464 78984708 + 31.6 0.000 intron (NM_198709, intron 2 of 7) CpG 724 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr5-370 chr5 54744246 54744490 + 31.6 0.000 promoter-TSS (NR_104658) promoter-TSS (NR_104658) -110 NR_104658 102467080 Hs.637409 NR_104658 LOC102467080 - uncharacterized LOC102467080 ncRNA chr12-107 chr12 111685934 111686178 + 31.6 0.000 promoter-TSS (NM_001136538) promoter-TSS (NM_001136538) 3 NM_001136538 80724 Hs.331141 NM_025247 ENSG00000111271 ACAD10 - acyl-CoA dehydrogenase family member 10 protein-coding chr17-246 chr17 35433478 35433722 + 31.6 0.000 promoter-TSS (NM_001289009) promoter-TSS (NM_001289009) -426 NM_001289009 55106 Hs.663548 NM_018042 ENSG00000172123 SLFN12 SLFN3 schlafen family member 12 protein-coding chr2-378 chr2 232988537 232988781 + 31.6 0.000 intron (NM_019850, intron 1 of 14) L1ME4b|LINE|L1 -23955 NR_136325 101928881 Hs.570311 NR_136325 ENSG00000222001 LOC101928881 - uncharacterized LOC101928881 ncRNA chr10-226 chr10 97401096 97401340 + 31.6 0.000 exon (NM_015179, exon 1 of 34) exon (NM_015179, exon 1 of 34) 122 NM_015179 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr22-200 chr22 46595821 46596065 + 31.6 0.000 intron (NM_001366660, intron 1 of 17) intron (NM_001366660, intron 1 of 17) 18855 NM_001366660 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr16-354 chr16 1964837 1965081 + 31.6 0.000 promoter-TSS (NR_003142) promoter-TSS (NR_003142) -37 NR_003142 735301 Hs.115329 NR_003142 ENSG00000255198 SNHG9 NCRNA00062 small nucleolar RNA host gene 9 ncRNA chr19-631 chr19 37467352 37467596 + 31.6 0.000 promoter-TSS (NM_001330482) promoter-TSS (NM_001330482) -30 NM_001330482 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding chr3-319 chr3 169773493 169773737 + 31.6 0.000 promoter-TSS (NM_001185119) promoter-TSS (NM_001185119) 219 NR_033703 55892 Hs.507025 NM_018657 ENSG00000085274 MYNN OSZF|SBBIZ1|ZBTB31|ZNF902 myoneurin protein-coding chr12-267 chr12 15911300 15911544 + 31.6 0.000 promoter-TSS (NM_001300779) promoter-TSS (NM_001300779) 90 NM_001300779 51071 Hs.39429 NM_015954 ENSG00000023697 DERA CGI-26|DEOC deoxyribose-phosphate aldolase protein-coding chr5-568 chr5 24120538 24120782 + 31.6 0.000 intron (NR_131245, intron 4 of 4) L1ME1|LINE|L1 169312 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA chr2-417 chr2 199955511 199955755 + 31.6 0.000 promoter-TSS (NR_109906) promoter-TSS (NR_109906) -142 NR_004862 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr5-148 chr5 81301506 81301750 + 31.6 0.000 promoter-TSS (NM_001131036) promoter-TSS (NM_001131036) 41 NM_001131035 84240 Hs.15536 NM_032280 ENSG00000131732 ZCCHC9 PPP1R41 zinc finger CCHC-type containing 9 protein-coding chr14-294 chr14 61493283 61493527 + 31.6 0.000 intron (NM_006255, intron 10 of 13) MLT1J|LTR|ERVL-MaLR 76789 NR_110417 101927780 Hs.254789 NR_110416 ENSG00000250548 LINC01303 - long intergenic non-protein coding RNA 1303 ncRNA chr12-215 chr12 124656014 124656258 + 31.4 0.000 Intergenic Intergenic -88524 NM_001077261 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chrX-34 chrX 15854704 15854948 + 31.4 0.000 promoter-TSS (NM_001272071) promoter-TSS (NM_001272071) -13 NM_001369007 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr10-262 chr10 51244862 51245106 + 31.4 0.000 intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -54589 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA chr19-518 chr19 40750861 40751105 + 31.4 0.000 promoter-TSS (NM_001353809) promoter-TSS (NM_001353809) -220 NM_004596 6626 Hs.466775 NM_004596 ENSG00000077312 SNRPA Mud1|U1-A|U1A small nuclear ribonucleoprotein polypeptide A protein-coding chr14-314 chr14 39432251 39432495 + 31.4 0.000 5' UTR (NM_203301, exon 1 of 4) 5' UTR (NM_203301, exon 1 of 4) 127 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr3-230 chr3 53347563 53347807 + 31.4 0.000 promoter-TSS (NM_001290205) promoter-TSS (NM_001290205) -142 NM_018403 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding chr12-364 chr12 31518752 31518996 + 31.4 0.000 intron (NM_001308339, intron 1 of 22) intron (NM_001308339, intron 1 of 22) -71049 NR_046909 100874249 Hs.627628 NR_046909 ENSG00000255867 DENND5B-AS1 - DENND5B antisense RNA 1 ncRNA chr20-338 chr20 44409341 44409585 + 31.4 0.000 intron (NM_001287183, intron 4 of 10) intron (NM_001287183, intron 4 of 10) 1343 NR_037419 100500813 NR_037419 ENSG00000266151 MIR3646 - microRNA 3646 ncRNA chr6-176 chr6 110180154 110180398 + 31.4 0.000 promoter-TSS (NM_015891) promoter-TSS (NM_015891) -151 NM_015891 51362 Hs.428147 NM_015891 ENSG00000168438 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding chr9-223 chr9 70258722 70258966 + 31.4 0.000 promoter-TSS (NM_015110) promoter-TSS (NM_015110) 30 NR_039990 100507299 Hs.556816 NR_039990 SMC5-AS1 MAMDC2-AS2 SMC5 antisense RNA 1 (head to head) ncRNA chr5-239 chr5 132227296 132227540 + 31.4 0.000 promoter-TSS (NM_004199) promoter-TSS (NM_004199) -176 NM_004199 8974 Hs.519568 NM_004199 ENSG00000072682 P4HA2 MYP25 prolyl 4-hydroxylase subunit alpha 2 protein-coding chr11-483 chr11 121829240 121829484 + 31.4 0.000 Intergenic Intergenic 270482 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr2-350 chr2 197705301 197705545 + 31.4 0.000 promoter-TSS (NM_138395) promoter-TSS (NM_138395) 54 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding chr6-79 chr6 88963628 88963872 + 31.4 0.000 promoter-TSS (NM_003800) promoter-TSS (NM_003800) -132 NM_003800 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding chr5-253 chr5 371937 372181 + 31.4 0.000 intron (NM_020731, intron 3 of 11) intron (NM_020731, intron 3 of 11) 67883 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr8-189 chr8 30804420 30804664 + 31.4 0.000 intron (NM_001009552, intron 1 of 6) MER77B|LTR|ERVL 8276 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr1-975 chr1 236455468 236455712 + 31.4 0.000 intron (NM_080738, intron 4 of 5) intron (NM_080738, intron 4 of 5) 60177 NM_080738 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr14-106 chr14 105192866 105193110 + 31.4 0.000 Intergenic Intergenic -11665 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr10-337 chr10 102856083 102856327 + 31.4 0.000 intron (NM_001136200, intron 1 of 4) Tigger13a|DNA|TcMar-Tigger 1946 NM_144591 119032 Hs.34492 NM_144591 ENSG00000166275 BORCS7 C10orf32 BLOC-1 related complex subunit 7 protein-coding chr1-1296 chr1 22388759 22389003 + 31.4 0.000 Intergenic L2b|LINE|L2 -62970 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr2-500 chr2 101305726 101305970 + 31.4 0.000 intron (NM_173647, intron 1 of 6) MIRb|SINE|MIR 2853 NM_173647 284996 Hs.142074 NM_173647 ENSG00000163162 RNF149 DNAPTP2 ring finger protein 149 protein-coding chr18-144 chr18 58541817 58542061 + 31.4 0.000 intron (NM_052947, intron 4 of 12) intron (NM_052947, intron 4 of 12) -58681 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chrX-75 chrX 42237867 42238111 + 31.4 0.000 Intergenic Intergenic -314435 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding chr12-938 chr12 15629180 15629424 + 31.4 0.000 intron (NM_004447, intron 18 of 20) intron (NM_004447, intron 18 of 20) 82691 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr4-271 chr4 111323632 111323876 + 31.4 0.000 Intergenic Intergenic -463107 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA chr2-715 chr2 1613886 1614130 + 31.4 0.000 Intergenic GA-rich|Low_complexity|Low_complexity 130507 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr4-349 chr4 145920279 145920523 + 31.4 0.000 intron (NM_178835, intron 1 of 14) intron (NM_178835, intron 1 of 14) 18422 NM_178835 152485 Hs.133916 NM_178835 ENSG00000151612 ZNF827 - zinc finger protein 827 protein-coding chr9-260 chr9 133956582 133956826 + 31.3 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 35620 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr16-293 chr16 1705875 1706119 + 31.3 0.000 promoter-TSS (NM_001318852) promoter-TSS (NM_001318852) -186 NM_001318852 23162 Hs.207763 NM_015133 ENSG00000138834 MAPK8IP3 JIP-3|JIP3|JSAP1|NEDBA|SYD2|syd mitogen-activated protein kinase 8 interacting protein 3 protein-coding chr11-314 chr11 62771279 62771523 + 31.3 0.000 promoter-TSS (NM_006473) promoter-TSS (NM_006473) 5 NM_006473 10629 Hs.714400 NM_006473 ENSG00000162227 TAF6L PAF65A TATA-box binding protein associated factor 6 like protein-coding chr2-291 chr2 108719466 108719710 + 31.3 0.000 5' UTR (NM_006267, exon 1 of 29) 5' UTR (NM_006267, exon 1 of 29) 106 NM_006267 5903 Hs.199561 NM_006267 ENSG00000153201 RANBP2 ADANE|ANE1|IIAE3|NUP358|TRP1|TRP2 RAN binding protein 2 protein-coding chr11-305 chr11 775158 775402 + 31.3 0.000 intron (NR_134868, intron 1 of 7) intron (NR_134868, intron 1 of 7) 2207 NM_001318820 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr1-270 chr1 43358647 43358891 + 31.3 0.000 promoter-TSS (NM_001255) promoter-TSS (NM_001255) -212 NM_001255 991 Hs.524947 NM_001255 ENSG00000117399 CDC20 CDC20A|bA276H19.3|p55CDC cell division cycle 20 protein-coding chr20-6 chr20 25390820 25391064 + 31.3 0.000 promoter-TSS (NM_015600) promoter-TSS (NM_015600) -107 NM_001042472 26090 Hs.441550 NM_015600 ENSG00000100997 ABHD12 ABHD12A|BEM46L2|C20orf22|PHARC|dJ965G21.2|hABHD12 abhydrolase domain containing 12 protein-coding chr6-227 chr6 48826905 48827149 + 31.3 0.000 Intergenic Intergenic 636226 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr5-127 chr5 8457433 8457677 + 31.3 0.000 promoter-TSS (NR_039984) promoter-TSS (NR_039984) 9 NR_039984 729506 Hs.566412 NR_039984 ENSG00000245729 LINC02226 - long intergenic non-protein coding RNA 2226 ncRNA chr10-136 chr10 97292524 97292768 + 31.3 0.000 promoter-TSS (NR_037909) promoter-TSS (NR_037909) -9 NM_032900 84986 Hs.80305 NM_032900 ENSG00000213390 ARHGAP19 - Rho GTPase activating protein 19 protein-coding chr19-242 chr19 39540006 39540250 + 31.3 0.000 promoter-TSS (NM_153232) promoter-TSS (NM_153232) 33 NM_153232 163126 Hs.18949 NM_153232 ENSG00000176396 EID2 CRI2|EID-2 EP300 interacting inhibitor of differentiation 2 protein-coding chr5-238 chr5 126680327 126680571 + 31.3 0.000 Intergenic LTR16A1|LTR|ERVL 48744 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding chr20-21 chr20 44885510 44885754 + 31.3 0.000 promoter-TSS (NM_139323) promoter-TSS (NM_139323) -73 NM_003404 7529 Hs.643544 NM_003404 ENSG00000166913 YWHAB GW128|HEL-S-1|HS1|KCIP-1|YWHAA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta protein-coding chrX-96 chrX 53048474 53048718 + 31.3 0.000 promoter-TSS (NM_018969) promoter-TSS (NM_018969) -728 NM_018969 54328 Hs.193011 NM_018969 ENSG00000184194 GPR173 SREB3 G protein-coupled receptor 173 protein-coding chr9-82 chr9 128361986 128362230 + 31.3 0.000 TTS (NM_005094) TTS (NM_005094) -9211 NM_001135947 81605 Hs.495229 NM_030914 ENSG00000167118 URM1 C9orf74 ubiquitin related modifier 1 protein-coding chr16-523 chr16 48511154 48511398 + 31.3 0.000 Intergenic Intergenic 98904 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding chr2-154 chr2 238239822 238240066 + 31.3 0.000 promoter-TSS (NM_001142853) promoter-TSS (NM_001142853) 94 NM_001142853 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr17-237 chr17 83109714 83109958 + 31.3 0.000 Intergenic Intergenic 28690 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr2-532 chr2 231714720 231714964 + 31.3 0.000 Intergenic Intergenic 1528 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr17-639 chr17 57519402 57519646 + 31.3 0.000 intron (NM_001322250, intron 6 of 13) MIR3|SINE|MIR 4073 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr5-115 chr5 140639386 140639630 + 31.3 0.000 promoter-TSS (NM_018502) promoter-TSS (NM_018502) 81 NM_001300980 55374 Hs.534333 NM_018502 ENSG00000113119 TMCO6 PRO1580 transmembrane and coiled-coil domains 6 protein-coding chr2-1160 chr2 223269390 223269634 + 31.3 0.000 Intergenic Intergenic 217582 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr19-215 chr19 17511345 17511589 + 31.3 0.000 promoter-TSS (NM_012088) promoter-TSS (NM_012088) -182 NM_012088 25796 Hs.466165 NM_012088 ENSG00000130313 PGLS 6PGL|HEL-S-304 6-phosphogluconolactonase protein-coding chr11-1198 chr11 100849301 100849545 + 31.3 0.000 intron (NM_001367945, intron 5 of 25) intron (NM_001367945, intron 5 of 25) -84851 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA chr1-682 chr1 8598174 8598418 + 31.3 0.000 intron (NM_001042681, intron 4 of 22) intron (NM_001042681, intron 4 of 22) -103383 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr14-216 chr14 67704598 67704842 + 31.3 0.000 intron (NM_152443, intron 1 of 8) intron (NM_152443, intron 1 of 8) 2834 NM_152443 145226 Hs.415322 NM_152443 ENSG00000139988 RDH12 LCA13|RP53|SDR7C2 retinol dehydrogenase 12 protein-coding chr10-159 chr10 122954181 122954425 + 31.3 0.000 promoter-TSS (NM_024942) promoter-TSS (NM_024942) -76 NM_024942 80007 Hs.501286 NM_024942 ENSG00000119965 C10orf88 - chromosome 10 open reading frame 88 protein-coding chr9-337 chr9 124869790 124870034 + 31.3 0.000 intron (NM_030978, intron 3 of 5) CpG 7782 NM_030978 81873 Hs.132499 NM_030978 ENSG00000136950 ARPC5L ARC16-2 actin related protein 2/3 complex subunit 5 like protein-coding chr5-69 chr5 154754959 154755203 + 31.3 0.000 promoter-TSS (NM_001367718) promoter-TSS (NM_001367718) -296 NM_001367718 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr9-187 chr9 133990972 133991216 + 31.3 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 1230 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr9-101 chr9 35071981 35072225 + 31.3 0.000 5' UTR (NM_001354928, exon 1 of 17) 5' UTR (NM_001354928, exon 1 of 17) 205 NM_001354928 7415 Hs.529782 NM_007126 ENSG00000165280 VCP CDC48|TERA|p97 valosin containing protein protein-coding chr16-199 chr16 55509746 55509990 + 31.3 0.000 intron (NM_017839, intron 1 of 13) intron (NM_017839, intron 1 of 13) 796 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr20-39 chr20 23421492 23421736 + 31.3 0.000 promoter-TSS (NM_022080) promoter-TSS (NM_022080) -95 NM_001283026 63908 Hs.269471 NM_022080 ENSG00000125814 NAPB SNAP-BETA|SNAPB NSF attachment protein beta protein-coding chr17-266 chr17 78359974 78360218 + 31.3 0.000 promoter-TSS (NM_003955) promoter-TSS (NM_003955) -17 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr10-582 chr10 71260626 71260870 + 31.3 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -42520 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr2-459 chr2 130391238 130391482 + 31.3 0.000 Intergenic CpG 35304 NM_001142370 26469 Hs.516390 NM_014369 ENSG00000072135 PTPN18 BDP1|PTP-HSCF protein tyrosine phosphatase non-receptor type 18 protein-coding chr1-889 chr1 204296394 204296638 + 31.3 0.000 intron (NM_014935, intron 1 of 22) intron (NM_014935, intron 1 of 22) 63413 NM_014935 22874 Hs.253146 NM_014935 ENSG00000143850 PLEKHA6 PEPP-3|PEPP3 pleckstrin homology domain containing A6 protein-coding chr11-368 chr11 76701688 76701932 + 31.1 0.000 intron (NR_024042, intron 13 of 20) intron (NR_024042, intron 13 of 20) 19979 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr6-840 chr6 111781149 111781393 + 31.1 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) -21354 NM_001370529 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr19-316 chr19 13163944 13164188 + 31.1 0.000 Intergenic Intergenic 13655 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr14-178 chr14 23155271 23155515 + 31.1 0.000 promoter-TSS (NR_049767) promoter-TSS (NR_049767) 65 NR_049767 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr17-590 chr17 8187582 8187826 + 31.1 0.000 TTS (NM_017622) TTS (NM_017622) 759 NR_039746 100616406 NR_039746 ENSG00000283160 MIR4521 mir-4521 microRNA 4521 ncRNA chr21-82 chr21 41142097 41142341 + 31.1 0.000 non-coding (NR_024100, exon 2 of 2) non-coding (NR_024100, exon 2 of 2) 5845 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr2-601 chr2 39107183 39107427 + 31.1 0.000 intron (NM_005633, intron 1 of 22) LTR16B2|LTR|ERVL 13158 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr5-333 chr5 173829852 173830096 + 31.1 0.000 Intergenic Intergenic -39032 NR_108028 101928154 Hs.366725 NR_108028 LINC01485 - long intergenic non-protein coding RNA 1485 ncRNA chr1-495 chr1 89820899 89821143 + 31.1 0.000 promoter-TSS (NM_018103) promoter-TSS (NM_018103) -11 NM_001134479 55144 Hs.482087 NM_018103 ENSG00000171492 LRRC8D LRRC5 leucine rich repeat containing 8 VRAC subunit D protein-coding chr5-602 chr5 131679999 131680243 + 31.1 0.000 intron (NM_133372, intron 11 of 17) MER3|DNA|hAT-Charlie -44892 NM_001164389 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding chr12-102 chr12 1594775 1595019 + 31.1 0.000 promoter-TSS (NM_152441) promoter-TSS (NM_152441) -316 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding chr7-132 chr7 143380141 143380385 + 31.1 0.000 intron (NR_161353, intron 1 of 1) intron (NR_161353, intron 1 of 1) 762 NR_161353 100507507 Hs.131743 NR_161353 LOC100507507 - uncharacterized LOC100507507 ncRNA chr1-644 chr1 48916307 48916551 + 31.1 0.000 intron (NM_001323575, intron 5 of 12) intron (NM_001323575, intron 5 of 12) -139460 NR_146232 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding chr6-292 chr6 131657613 131657857 + 31.1 0.000 intron (NR_133007, intron 5 of 23) L1ME3A|LINE|L1 20433 NR_133007 5169 Hs.486489 NM_005021 ENSG00000154269 ENPP3 B10|CD203c|NPP3|PD-IBETA|PDNP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 protein-coding chr2-558 chr2 85998675 85998919 + 31.1 0.000 Intergenic Intergenic 107089 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr18-72 chr18 23586648 23586892 + 31.1 0.000 promoter-TSS (NM_000271) promoter-TSS (NM_000271) -264 NM_000271 4864 Hs.464779 NM_000271 ENSG00000141458 NPC1 NPC|POGZ|SLC65A1 NPC intracellular cholesterol transporter 1 protein-coding chr14-125 chr14 23352706 23352950 + 31.1 0.000 promoter-TSS (NM_016609) promoter-TSS (NM_016609) 84 NR_110290 51310 Hs.373498 NM_016609 ENSG00000092096 SLC22A17 24p3R|BOCT|BOIT|NGALR|NGALR2|NGALR3|hBOIT solute carrier family 22 member 17 protein-coding chr3-472 chr3 46960258 46960502 + 31.1 0.000 intron (NM_144716, intron 2 of 7) intron (NM_144716, intron 2 of 7) 16121 NR_102269 151903 Hs.631918 NM_144716 ENSG00000160799 CCDC12 - coiled-coil domain containing 12 protein-coding chr2-455 chr2 118089287 118089531 + 31.1 0.000 intron (NM_001321332, intron 1 of 5) intron (NM_001321332, intron 1 of 5) 859 NM_001321332 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding chr16-167 chr16 66830504 66830748 + 31.1 0.000 intron (NM_001018159, intron 1 of 20) CpG 350 NM_001018159 8883 Hs.460978 NM_003905 ENSG00000159593 NAE1 A-116A10.1|APPBP1|HPP1|ula-1 NEDD8 activating enzyme E1 subunit 1 protein-coding chr22-69 chr22 49853418 49853662 + 31.1 0.000 promoter-TSS (NM_014838) promoter-TSS (NM_014838) -304 NM_014838 9889 Hs.475208 NM_014838 ENSG00000100426 ZBED4 - zinc finger BED-type containing 4 protein-coding chr1-1115 chr1 245881102 245881346 + 31.1 0.000 intron (NM_022743, intron 8 of 11) intron (NM_022743, intron 8 of 11) 536188 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr11-406 chr11 236555 236799 + 31.1 0.000 promoter-TSS (NM_012239) promoter-TSS (NM_012239) 254 NM_001370322 23410 Hs.716456 NM_012239 ENSG00000142082 SIRT3 SIR2L3 sirtuin 3 protein-coding chr3-426 chr3 185254076 185254320 + 31.1 0.000 promoter-TSS (NR_106712) promoter-TSS (NR_106712) -149 NM_001166415 1962 Hs.429879 NM_001966 ENSG00000113790 EHHADH ECHD|FRTS3|L-PBE|LBFP|LBP|PBFE enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase protein-coding chr1-1045 chr1 81702904 81703148 + 31.1 0.000 intron (NM_001297704, intron 1 of 20) intron (NM_001297704, intron 1 of 20) 3256 NM_001297704 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr14-408 chr14 51554339 51554583 + 31.1 0.000 intron (NR_047477, intron 2 of 3) L1MC3|LINE|L1 45491 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr2-364 chr2 98560263 98560507 + 31.1 0.000 intron (NM_001351428, intron 17 of 24) intron (NM_001351428, intron 17 of 24) 48127 NM_001008215 493753 Hs.596537 NM_001008215 ENSG00000183513 COA5 6330578E17Rik|C2orf64|CEMCOX3|Pet191 cytochrome c oxidase assembly factor 5 protein-coding chr18-79 chr18 7038484 7038728 + 31.1 0.000 intron (NM_005559, intron 11 of 62) intron (NM_005559, intron 11 of 62) 79191 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr3-284 chr3 122975450 122975694 + 31.1 0.000 intron (NR_046079, intron 1 of 22) MIRb|SINE|MIR 562 NM_001256347 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr3-110 chr3 124033069 124033313 + 31.1 0.000 Intergenic CpG -41021 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr5-393 chr5 150112801 150113045 + 31.1 0.000 TTS (NM_001355017) TTS (NM_001355017) 449 NM_005211 1436 Hs.586219 NM_005211 ENSG00000182578 CSF1R C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R colony stimulating factor 1 receptor protein-coding chr2-115 chr2 45009873 45010117 + 31.1 0.000 promoter-TSS (NM_016932) promoter-TSS (NM_016932) -543 NM_016932 10736 Hs.101937 NM_016932 ENSG00000170577 SIX2 - SIX homeobox 2 protein-coding chr5-286 chr5 74316110 74316354 + 31.1 0.000 Intergenic Intergenic -6254 NR_105010 101929082 Hs.434316 NR_105010 ENSG00000249343 LINC01333 - long intergenic non-protein coding RNA 1333 ncRNA chr7-739 chr7 66790411 66790655 + 31.1 0.000 intron (NM_001367725, intron 6 of 10) intron (NM_001367725, intron 6 of 10) 34651 NM_001287061 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr19-646 chr19 58545586 58545830 + 31.1 0.000 intron (NM_005762, intron 2 of 16) intron (NM_005762, intron 2 of 16) 1644 NM_005762 10155 Hs.467408 NM_005762 ENSG00000130726 TRIM28 KAP1|PPP1R157|RNF96|TF1B|TIF1B tripartite motif containing 28 protein-coding chr21-34 chr21 25734938 25735182 + 31.1 0.000 promoter-TSS (NM_002040) promoter-TSS (NM_002040) 88 NM_001197297 2551 Hs.473470 NM_002040 ENSG00000154727 GABPA E4TF1-60|E4TF1A|NFT2|NRF2|NRF2A|RCH04A07 GA binding protein transcription factor subunit alpha protein-coding chr4-564 chr4 176443169 176443413 + 31.0 0.000 Intergenic Intergenic 123325 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr8-261 chr8 48536023 48536267 + 31.0 0.000 Intergenic Intergenic -15422 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr19-577 chr19 6736656 6736900 + 31.0 0.000 promoter-TSS (NR_106849) promoter-TSS (NR_106849) 0 NR_106849 102465474 NR_106849 ENSG00000283950 MIR6791 hsa-mir-6791 microRNA 6791 ncRNA chr2-218 chr2 207513975 207514219 + 31.0 0.000 Intergenic Intergenic -15865 NM_004379 1385 Hs.516646 NM_004379 ENSG00000118260 CREB1 CREB|CREB-1 cAMP responsive element binding protein 1 protein-coding chr5-381 chr5 122723721 122723965 + 31.0 0.000 intron (NR_109881, intron 3 of 11) intron (NR_109881, intron 3 of 11) 6717 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA chr2-240 chr2 25342424 25342668 + 31.0 0.000 promoter-TSS (NM_175630) promoter-TSS (NM_175630) 44 NM_175630 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr8-125 chr8 144787102 144787346 + 31.0 0.000 intron (NM_001286769, intron 1 of 5) CpG 121 NM_001286769 80778 Hs.631854 NM_030580 ENSG00000196378 ZNF34 KOX32 zinc finger protein 34 protein-coding chr2-482 chr2 9475044 9475288 + 31.0 0.000 5' UTR (NM_001320858, exon 1 of 6) 5' UTR (NM_001320858, exon 1 of 6) 111 NM_001320858 285148 Hs.667226 NM_001039613 ENSG00000134330 IAH1 - isoamyl acetate hydrolyzing esterase 1 (putative) protein-coding chr7-116 chr7 1123724 1123968 + 31.0 0.000 intron (NM_001350970, intron 2 of 2) intron (NM_001350970, intron 2 of 2) 14401 NM_001318252 84310 Hs.653258 NM_032350 ENSG00000146540 C7orf50 YCR016W chromosome 7 open reading frame 50 protein-coding chr10-267 chr10 98323515 98323759 + 31.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -55443 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr2-146 chr2 73234312 73234556 + 31.0 0.000 intron (NM_001009570, intron 1 of 6) CpG-16154 126 NM_006429 10574 Hs.368149 NM_006429 ENSG00000135624 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1 subunit 7 protein-coding chrX-91 chrX 149829745 149829989 + 31.0 0.000 intron (NR_109813, intron 1 of 2) HERVIP10B3-int|LTR|ERV1 4159 NR_109813 101241891 Hs.744829 NR_109813 ENSG00000280752 LINC00850 KUCG1 long intergenic non-protein coding RNA 850 ncRNA chr2-402 chr2 113283929 113284173 + 31.0 0.000 Intergenic Intergenic -5130 NM_003466 7849 Hs.469728 NM_003466 ENSG00000125618 PAX8 - paired box 8 protein-coding chr4-166 chr4 6688909 6689153 + 31.0 0.000 intron (NR_147207, intron 2 of 2) intron (NR_147207, intron 2 of 2) 1488 NR_147207 339988 Hs.434746 NR_147207 ENSG00000246526 LINC002481 - long intergenic non-protein coding RNA 2481 ncRNA chr2-492 chr2 67871927 67872171 + 31.0 0.000 Intergenic Intergenic -46487 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA chr2-12 chr2 89833192 89833436 + 31.0 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -195407 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo chr14-153 chr14 31026676 31026920 + 31.0 0.000 promoter-TSS (NM_014574) promoter-TSS (NM_014574) 155 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr2-473 chr2 217393658 217393902 + 31.0 0.000 intron (NR_026597, intron 8 of 12) intron (NR_026597, intron 8 of 12) 111047 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr14-309 chr14 21264196 21264440 + 31.0 0.000 intron (NM_031314, intron 1 of 8) intron (NM_031314, intron 1 of 8) 5161 NM_031314 3183 Hs.508848 NM_004500 ENSG00000092199 HNRNPC C1|C2|HNRNP|HNRPC|SNRPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein-coding chr12-228 chr12 105107740 105107984 + 31.0 0.000 promoter-TSS (NR_121211) promoter-TSS (NR_121211) 131 NM_015275 23325 Hs.12144 NM_015275 ENSG00000136051 WASHC4 KIAA1033|MRT43|SWIP WASH complex subunit 4 protein-coding chr2-569 chr2 209431784 209432028 + 31.0 0.000 intron (NM_001039538, intron 1 of 14) intron (NM_001039538, intron 1 of 14) 7859 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr5-83 chr5 193092 193336 + 31.0 0.000 intron (NM_001080478, intron 1 of 1) intron (NM_001080478, intron 1 of 1) 1719 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr10-678 chr10 103153617 103153861 + 31.0 0.000 promoter-TSS (NM_001351192) promoter-TSS (NM_001351192) 82 NM_001351174 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr3-127 chr3 136196408 136196652 + 31.0 0.000 promoter-TSS (NM_018133) promoter-TSS (NM_018133) -195 NM_018133 55167 Hs.18631 NM_018133 ENSG00000174579 MSL2 MSL-2|MSL2L1|RNF184 MSL complex subunit 2 protein-coding chr7-412 chr7 4800440 4800684 + 31.0 0.000 intron (NM_018059, intron 12 of 14) intron (NM_018059, intron 12 of 14) -11923 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr19-896 chr19 52648261 52648505 + 31.0 0.000 intron (NM_001348018, intron 3 of 5) LTR61|LTR|ERV1 -9992 NM_001105549 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr8-175 chr8 98157927 98158171 + 30.8 0.000 exon (NM_001145861, exon 16 of 16) exon (NM_001145861, exon 16 of 16) 40209 NM_015029 10940 Hs.252828 NM_015029 ENSG00000104356 POP1 ANXD2 POP1 homolog, ribonuclease P/MRP subunit protein-coding chr9-270 chr9 12923542 12923786 + 30.8 0.000 Intergenic Intergenic 48969 NR_132976 106635615 NR_132976 SNORD137 - small nucleolar RNA, C/D box 137 snoRNA chr12-132 chr12 132622640 132622884 + 30.8 0.000 TTS (NM_006231) TTS (NM_006231) 3986 NM_012226 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr17-318 chr17 63841726 63841970 + 30.8 0.000 intron (NM_001098426, intron 1 of 12) intron (NM_001098426, intron 1 of 12) 618 NM_001330439 6603 Hs.250581 NM_003077 ENSG00000108604 SMARCD2 BAF60B|CRACD2|PRO2451|Rsc6p|SGD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 protein-coding chr9-135 chr9 130053835 130054079 + 30.8 0.000 promoter-TSS (NM_001136557) promoter-TSS (NM_001136557) 51 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr3-255 chr3 134358141 134358385 + 30.8 0.000 intron (NM_001278683, intron 9 of 9) intron (NM_001278683, intron 9 of 9) 9599 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr14-333 chr14 75648377 75648621 + 30.8 0.000 TTS (NM_001195283) TTS (NM_001195283) 12377 NM_007176 11161 Hs.15106 NM_007176 ENSG00000133935 ERG28 C14orf1|NET51 ergosterol biosynthesis 28 homolog protein-coding chr16-117 chr16 3282814 3283058 + 30.8 0.000 promoter-TSS (NM_005741) promoter-TSS (NM_005741) -555 NM_005741 10127 Hs.611475 NM_005741 ENSG00000006194 ZNF263 FPM315|ZKSCAN12|ZSCAN44 zinc finger protein 263 protein-coding chr10-100 chr10 122879600 122879844 + 30.8 0.000 promoter-TSS (NR_037915) promoter-TSS (NR_037915) -81 NR_037911 196792 Hs.114648 NM_152644 ENSG00000213185 FAM24B - family with sequence similarity 24 member B protein-coding chr6-186 chr6 157922051 157922295 + 30.8 0.000 intron (NM_016224, intron 10 of 17) intron (NM_016224, intron 10 of 17) -59690 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr1-392 chr1 158999684 158999928 + 30.8 0.000 promoter-TSS (NM_001364867) promoter-TSS (NM_001364867) -170 NM_001364867 3428 Hs.380250 NM_005531 ENSG00000163565 IFI16 IFNGIP1|PYHIN2 interferon gamma inducible protein 16 protein-coding chr20-79 chr20 40279466 40279710 + 30.8 0.000 Intergenic Intergenic 275127 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA chr4-748 chr4 132458289 132458533 + 30.8 0.000 Intergenic L1PA5|LINE|L1 -132678 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr11-490 chr11 3049960 3050204 + 30.8 0.000 intron (NR_036542, intron 1 of 22) intron (NR_036542, intron 1 of 22) 7341 NR_036542 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr17-311 chr17 43171053 43171297 + 30.8 0.000 promoter-TSS (NM_001291572) promoter-TSS (NM_001291572) -39 NM_001291571 4077 Hs.277721 NM_005899 ENSG00000188554 NBR1 1A1-3B|IAI3B|M17S2|MIG19 NBR1 autophagy cargo receptor protein-coding chr19-325 chr19 47273582 47273826 + 30.8 0.000 promoter-TSS (NR_037675) promoter-TSS (NR_037675) -719 NR_037675 255783 Hs.128690 NM_178511 ENSG00000257704 INAFM1 PRR24 InaF motif containing 1 protein-coding chr19-183 chr19 9792303 9792547 + 30.8 0.000 intron (NR_148545, intron 1 of 1) CpG 755 NR_148545 100505555 Hs.445295 NR_148545 ENSG00000196605 LOC100505555 - uncharacterized LOC100505555 ncRNA chr4-504 chr4 7973635 7973879 + 30.8 0.000 intron (NM_001130084, intron 19 of 19) intron (NM_001130084, intron 19 of 19) 31624 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr4-355 chr4 165684261 165684505 + 30.8 0.000 promoter-TSS (NR_121676) promoter-TSS (NR_121676) -256 NR_121676 101928151 Hs.639858 NR_121676 ENSG00000249500 LINC01179 - long intergenic non-protein coding RNA 1179 ncRNA chr1-894 chr1 218209543 218209787 + 30.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -75628 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr17-188 chr17 43900612 43900856 + 30.8 0.000 promoter-TSS (NM_001278376) promoter-TSS (NM_001278376) -110 NM_001278376 4355 Hs.514208 NM_005374 ENSG00000108852 MPP2 DLG2 membrane palmitoylated protein 2 protein-coding chr11-818 chr11 83891027 83891271 + 30.8 0.000 intron (NM_001142700, intron 7 of 19) L2|LINE|L2 -208724 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr12-235 chr12 1553041 1553285 + 30.8 0.000 Intergenic MER103C|DNA|hAT-Charlie -20971 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr8-177 chr8 101902511 101902755 + 30.8 0.000 intron (NM_001040624, intron 4 of 7) intron (NM_001040624, intron 4 of 7) -81799 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA chr3-332 chr3 37526597 37526841 + 30.8 0.000 intron (NM_002207, intron 13 of 27) intron (NM_002207, intron 13 of 27) 74578 NM_002207 3680 Hs.113157 NM_002207 ENSG00000144668 ITGA9 ALPHA-RLC|ITGA4L|RLC integrin subunit alpha 9 protein-coding chr9-357 chr9 86585854 86586098 + 30.8 0.000 Intergenic Intergenic -231566 NM_001330718 79670 Hs.597057 NM_024617 ENSG00000083223 TUT7 PAPD6|TENT3B|ZCCHC6 terminal uridylyl transferase 7 protein-coding chr20-93 chr20 49345135 49345379 + 30.8 0.000 Intergenic Intergenic 64574 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chrX-32 chrX 78103824 78104068 + 30.8 0.000 promoter-TSS (NM_000291) promoter-TSS (NM_000291) -302 NM_000291 5230 Hs.78771 NM_000291 ENSG00000102144 PGK1 HEL-S-68p|MIG10|PGKA phosphoglycerate kinase 1 protein-coding chr1-397 chr1 206674872 206675116 + 30.8 0.000 Intergenic Intergenic -9911 NM_004759 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr11-823 chr11 117180180 117180424 + 30.8 0.000 intron (NM_001040455, intron 1 of 25) intron (NM_001040455, intron 1 of 25) 1559 NM_001040455 51092 Hs.712144 NM_015996 ENSG00000149577 SIDT2 CGI-40 SID1 transmembrane family member 2 protein-coding chrX-89 chrX 24341850 24342094 + 30.8 0.000 Intergenic Intergenic -20711 NM_001136234 100130302 Hs.717243 NM_001136234 SUPT20HL1 FAM48B1|SPT20L SUPT20H like 1 protein-coding chrX-108 chrX 14029786 14030030 + 30.8 0.000 promoter-TSS (NM_001042479) promoter-TSS (NM_001042479) -16 NM_001042480 54960 Hs.592237 NM_017856 ENSG00000046647 GEMIN8 FAM51A1 gem nuclear organelle associated protein 8 protein-coding chr4-196 chr4 3452021 3452265 + 30.8 0.000 Intergenic LTR24C|LTR|ERV1 10175 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr11-271 chr11 9573234 9573478 + 30.8 0.000 promoter-TSS (NM_003390) promoter-TSS (NM_003390) -314 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr1-1813 chr1 114320623 114320867 + 30.8 0.000 Intergenic Intergenic -166876 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr2-171 chr2 46488098 46488342 + 30.8 0.000 Intergenic Intergenic 8655 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr3-1136 chr3 78919108 78919352 + 30.8 0.000 intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 100229 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr1-1413 chr1 172909491 172909735 + 30.8 0.000 Intergenic Intergenic 141350 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr9-458 chr9 137000168 137000412 + 30.8 0.000 Intergenic Intergenic -3722 NM_004669 9022 Hs.64746 NM_004669 ENSG00000169583 CLIC3 - chloride intracellular channel 3 protein-coding chr11-451 chr11 6638005 6638249 + 30.7 0.000 intron (NM_003737, intron 2 of 20) intron (NM_003737, intron 2 of 20) 17682 NM_003737 8642 Hs.199850 NM_003737 ENSG00000166341 DCHS1 CDH19|CDH25|CDHR6|FIB1|MVP2|PCDH16|VMLDS1 dachsous cadherin-related 1 protein-coding chr2-229 chr2 152718193 152718437 + 30.7 0.000 promoter-TSS (NM_001365597) promoter-TSS (NM_001365597) -9 NR_146427 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr11-320 chr11 97966151 97966395 + 30.7 0.000 Intergenic HUERS-P3-int|LTR|ERV1 -1054676 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr1-212 chr1 109075953 109076197 + 30.7 0.000 promoter-TSS (NM_005645) promoter-TSS (NM_005645) -72 NM_005645 6884 Hs.632426 NM_005645 ENSG00000197780 TAF13 MRT60|TAF(II)18|TAF2K|TAFII-18|TAFII18 TATA-box binding protein associated factor 13 protein-coding chr22-471 chr22 21037829 21038073 + 30.7 0.000 Intergenic LTR24|LTR|ERV1 -3679 NR_030379 693234 NR_030379 ENSG00000207575 MIR649 MIRN649|hsa-mir-649 microRNA 649 ncRNA chr16-327 chr16 77382 77626 + 30.7 0.000 promoter-TSS (NM_002434) promoter-TSS (NM_002434) 485 NM_001015054 4350 Hs.459596 NM_002434 ENSG00000103152 MPG AAG|ADPG|APNG|CRA36.1|MDG|Mid1|PIG11|PIG16|anpg N-methylpurine DNA glycosylase protein-coding chr5-399 chr5 168712568 168712812 + 30.7 0.000 non-coding (NR_130737, exon 5 of 7) non-coding (NR_130737, exon 5 of 7) 5763 NR_130737 101927969 Hs.661903 NR_130737 LOC101927969 - uncharacterized LOC101927969 ncRNA chr5-378 chr5 79318976 79319220 + 30.7 0.000 intron (NM_152405, intron 10 of 10) intron (NM_152405, intron 10 of 10) 82967 NM_152405 133746 Hs.482605 NM_152405 ENSG00000152409 JMY WHAMM2|WHDC1L3 junction mediating and regulatory protein, p53 cofactor protein-coding chr20-50 chr20 57902590 57902834 + 30.7 0.000 Intergenic Intergenic -101192 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr3-191 chr3 18111927 18112171 + 30.7 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 149497 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr12-172 chr12 75511567 75511811 + 30.7 0.000 promoter-TSS (NM_007043) promoter-TSS (NM_007043) -80 NM_007043 11103 Hs.645517 NM_007043 ENSG00000111615 KRR1 HRB2|RIP-1 KRR1 small subunit processome component homolog protein-coding chr1-492 chr1 65247766 65248010 + 30.7 0.000 Intergenic Intergenic -16806 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr17-314 chr17 49788344 49788588 + 30.7 0.000 promoter-TSS (NM_001199158) promoter-TSS (NM_001199158) -215 NM_001199157 11143 Hs.21907 NM_007067 ENSG00000136504 KAT7 HBO1|HBOA|MYST2|ZC2HC7 lysine acetyltransferase 7 protein-coding chr1-684 chr1 11908362 11908606 + 30.7 0.000 TTS (NR_002754) TTS (NR_002754) 330 NR_002754 26829 NR_002754 ENSG00000199347 RNU5E-1 RNU5E|U5E RNA, U5E small nuclear 1 snRNA chr13-178 chr13 51557998 51558242 + 30.7 0.000 Intergenic L2|LINE|L2 5531 NR_039852 100616423 NR_039852 ENSG00000266611 MIR4703 - microRNA 4703 ncRNA chr2-454 chr2 114022779 114023023 + 30.7 0.000 intron (NR_148509, intron 1 of 1) MLT2C2|LTR|ERVL -42917 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA chr10-263 chr10 71888876 71889120 + 30.7 0.000 Intergenic CpG -37747 NM_001042465 5660 Hs.523004 NM_002778 ENSG00000197746 PSAP GLBA|SAP1 prosaposin protein-coding chr22-43 chr22 45997648 45997892 + 30.7 0.000 Intergenic Intergenic -8846 NR_027240 730668 Hs.640071 NR_027240 ENSG00000280424 LOC730668 - dynein heavy chain -like pseudogene pseudo chr4-348 chr4 145131082 145131326 + 30.7 0.000 Intergenic Intergenic -32663 NM_001256708 10393 Hs.480876 NM_014885 ENSG00000164162 ANAPC10 APC10|DOC1 anaphase promoting complex subunit 10 protein-coding chr1-119 chr1 27366888 27367132 + 30.7 0.000 promoter-TSS (NM_004672) promoter-TSS (NM_004672) -49 NM_001297609 9064 Hs.194694 NM_004672 ENSG00000142733 MAP3K6 ASK2|MAPKKK6|MEKK6 mitogen-activated protein kinase kinase kinase 6 protein-coding chr14-169 chr14 50311905 50312149 + 30.7 0.000 promoter-TSS (NM_015684) promoter-TSS (NM_015684) 202 NM_024884 79944 Hs.256034 NM_024884 ENSG00000087299 L2HGDH C14orf160|L2HGA L-2-hydroxyglutarate dehydrogenase protein-coding chr14-195 chr14 67695628 67695872 + 30.7 0.000 promoter-TSS (NM_001252650) promoter-TSS (NM_001252650) 14 NM_016026 51109 Hs.719925 NM_016026 ENSG00000072042 RDH11 ARSDR1|CGI82|HCBP12|MDT1|PSDR1|RALR1|RDJCSS|SCALD|SDR7C1 retinol dehydrogenase 11 protein-coding chr17-247 chr17 47323744 47323988 + 30.7 0.000 promoter-TSS (NM_152347) promoter-TSS (NM_152347) 35 NR_110880 102724508 Hs.661005 NR_110880 ENSG00000263293 THCAT158 - thyroid cancer-associated transcript 158 ncRNA chr8-289 chr8 26457882 26458126 + 30.7 0.000 Intergenic Intergenic 55868 NM_007257 10687 Hs.591838 NM_007257 ENSG00000240694 PNMA2 MA2|MM2|RGAG2 PNMA family member 2 protein-coding chr6-266 chr6 149941837 149942081 + 30.7 0.000 promoter-TSS (NM_025217) promoter-TSS (NM_025217) -55 NM_025217 80328 Hs.656778 NM_025217 ENSG00000131015 ULBP2 ALCAN-alpha|N2DL2|NKG2DL2|RAET1H|RAET1L UL16 binding protein 2 protein-coding chr16-215 chr16 75464699 75464943 + 30.7 0.000 promoter-TSS (NM_145254) promoter-TSS (NM_145254) -84 NM_001304998 124491 Hs.487510 NM_145254 ENSG00000166822 TMEM170A TMEM170 transmembrane protein 170A protein-coding chr12-200 chr12 119877280 119877524 + 30.7 0.000 promoter-TSS (NM_001206999) promoter-TSS (NM_001206999) -82 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr6-498 chr6 18434381 18434625 + 30.7 0.000 intron (NM_182757, intron 3 of 7) intron (NM_182757, intron 3 of 7) 47153 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr11-828 chr11 122038655 122038899 + 30.7 0.000 intron (NR_137178, intron 3 of 4) intron (NR_137178, intron 3 of 4) 61067 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA chr1-1541 chr1 119648272 119648516 + 30.7 0.000 promoter-TSS (NM_001080470) promoter-TSS (NM_001080470) -128 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr5-155 chr5 160421774 160422018 + 30.7 0.000 promoter-TSS (NM_004219) promoter-TSS (NM_004219) -14 NM_001282382 9232 Hs.350966 NM_004219 ENSG00000164611 PTTG1 EAP1|HPTTG|PTTG|TUTR1 PTTG1 regulator of sister chromatid separation, securin protein-coding chr16-209 chr16 46400009 46400253 + 30.7 0.000 Intergenic Intergenic 168966 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo chr2-373 chr2 187448251 187448495 + 30.7 0.000 promoter-TSS (NM_001271751) promoter-TSS (NM_001271751) -121 NM_005795 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding chr8-80 chr8 104589153 104589397 + 30.7 0.000 promoter-TSS (NM_001135703) promoter-TSS (NM_001135703) -251 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr5-139 chr5 173616692 173616936 + 30.5 0.000 promoter-TSS (NM_001159651) promoter-TSS (NM_001159651) -151 NM_001159651 91272 Hs.425091 NM_138369 ENSG00000145919 BOD1 FAM44B biorientation of chromosomes in cell division 1 protein-coding chr1-605 chr1 156146054 156146298 + 30.5 0.000 Intergenic MIRb|SINE|MIR -3768 NM_001370569 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr6-298 chr6 166691287 166691531 + 30.5 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -64158 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr4-402 chr4 34181299 34181543 + 30.5 0.000 intron (NR_147184, intron 2 of 3) intron (NR_147184, intron 2 of 3) 88326 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr7-318 chr7 37031993 37032237 + 30.5 0.000 intron (NM_001206480, intron 15 of 21) intron (NM_001206480, intron 15 of 21) 34319 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA chr2-61 chr2 69387176 69387420 + 30.5 0.000 promoter-TSS (NM_001244710) promoter-TSS (NM_001244710) -44 NM_001244710 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr11-1205 chr11 113184576 113184820 + 30.5 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 89203 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr6-223 chr6 27132652 27132896 + 30.5 0.000 promoter-TSS (NM_021064) promoter-TSS (NM_021064) 22 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr11-474 chr11 72141204 72141448 + 30.5 0.000 Intergenic L1MC4|LINE|L1 5601 NM_000804 2352 Hs.352 NM_000804 ENSG00000110203 FOLR3 FR-G|FR-gamma|FRgamma|gamma-hFR folate receptor gamma protein-coding chr10-140 chr10 118046615 118046859 + 30.5 0.000 promoter-TSS (NR_026941) promoter-TSS (NR_026941) -84 NR_026940 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA chr16-253 chr16 4768633 4768877 + 30.5 0.000 Intergenic (CGCCC)n|Simple_repeat|Simple_repeat -1593 NM_001303450 26048 Hs.513316 NM_021646 ENSG00000103199 ZNF500 ZKSCAN18|ZSCAN50 zinc finger protein 500 protein-coding chr5-281 chr5 10563709 10563953 + 30.5 0.000 promoter-TSS (NM_001164440) promoter-TSS (NM_001164440) -239 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr14-150 chr14 92794174 92794418 + 30.5 0.000 promoter-TSS (NM_005113) promoter-TSS (NM_005113) -9 NM_005113 9950 Hs.104320 NM_005113 ENSG00000066455 GOLGA5 GOLIM5|RFG5|ret-II golgin A5 protein-coding chr22-172 chr22 18068397 18068641 + 30.5 0.000 Intergenic Intergenic -9401 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr22-224 chr22 30325154 30325398 + 30.5 0.000 intron (NM_001204240, intron 1 of 8) intron (NM_001204240, intron 1 of 8) 1665 NM_031937 83874 Hs.655273 NM_031937 ENSG00000099992 TBC1D10A EPI64|TBC1D10|dJ130H16.1|dJ130H16.2 TBC1 domain family member 10A protein-coding chr1-593 chr1 66944703 66944947 + 30.5 0.000 intron (NM_001350530, intron 5 of 15) AluJb|SINE|Alu 14569 NM_001077701 57708 Hs.605432 NM_020948 ENSG00000198160 MIER1 ER1|MI-ER1 MIER1 transcriptional regulator protein-coding chr9-537 chr9 115157229 115157473 + 30.5 0.000 intron (NR_163556, intron 1 of 7) intron (NR_163556, intron 1 of 7) 15533 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr5-120 chr5 43556711 43556955 + 30.5 0.000 exon (NM_182789, exon 1 of 11) exon (NM_182789, exon 1 of 11) 244 NM_006451 10605 Hs.482038 NM_006451 ENSG00000172239 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding chr1-592 chr1 63523095 63523339 + 30.5 0.000 promoter-TSS (NM_001206739) promoter-TSS (NM_001206739) 56 NM_001347148 23421 Hs.166539 NM_014288 ENSG00000142856 ITGB3BP CENP-R|CENPR|HSU37139|NRIF3|TAP20 integrin subunit beta 3 binding protein protein-coding chr15-263 chr15 70495096 70495340 + 30.5 0.000 Intergenic Intergenic 10710 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr11-120 chr11 111602116 111602360 + 30.5 0.000 promoter-TSS (NM_015191) promoter-TSS (NM_015191) -211 NM_015191 23235 Hs.269128 NM_015191 ENSG00000170145 SIK2 LOH11CR1I|QIK|SIK-2|SNF1LK2 salt inducible kinase 2 protein-coding chr16-196 chr16 34581320 34581564 + 30.5 0.000 Intergenic Intergenic -199962 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo chr6-29 chr6 158999857 159000101 + 30.5 0.000 non-coding (NR_144434, exon 1 of 9) non-coding (NR_144434, exon 1 of 9) 208 NM_001346418 83861 Hs.154628 NM_031924 ENSG00000130363 RSPH3 CILD32|RSHL2|RSP3|dJ111C20.1 radial spoke head 3 protein-coding chr10-221 chr10 70052796 70053040 + 30.5 0.000 promoter-TSS (NM_018649) promoter-TSS (NM_018649) 72 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr3-984 chr3 77412157 77412401 + 30.5 0.000 intron (NM_001290039, intron 2 of 26) intron (NM_001290039, intron 2 of 26) 314267 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding chr3-354 chr3 158711951 158712195 + 30.5 0.000 intron (NM_206963, intron 2 of 5) intron (NM_206963, intron 2 of 5) 20384 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr2-134 chr2 126657883 126658127 + 30.5 0.000 intron (NM_016815, intron 1 of 2) intron (NM_016815, intron 1 of 2) 1847 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding chr14-451 chr14 103641209 103641453 + 30.5 0.000 intron (NM_182923, intron 1 of 14) L1MC3|LINE|L1 12143 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr3-280 chr3 101827760 101828004 + 30.5 0.000 promoter-TSS (NM_001005474) promoter-TSS (NM_001005474) -108 NM_001005474 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr1-420 chr1 111228545 111228789 + 30.5 0.000 intron (NM_001025197, intron 1 of 9) intron (NM_001025197, intron 1 of 9) 954 NM_004000 1117 Hs.514840 NM_004000 ENSG00000064886 CHI3L2 CHIL2|YKL-39|YKL39 chitinase 3 like 2 protein-coding chr1-580 chr1 19974788 19975032 + 30.5 0.000 TTS (NM_000300) TTS (NM_000300) 4749 NM_001161729 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding chr10-537 chr10 101161870 101162114 + 30.5 0.000 Intergenic Intergenic -14330 NR_120620 101927396 Hs.551648 NR_120620 ENSG00000237579 LINC01514 - long intergenic non-protein coding RNA 1514 ncRNA chr22-219 chr22 17717848 17718092 + 30.5 0.000 intron (NM_001270733, intron 1 of 1) AluJr4|SINE|Alu 11312 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr1-510 chr1 203128118 203128362 + 30.5 0.000 intron (NM_001048230, intron 1 of 2) CpG 514 NM_001365066 134 Hs.77867 NM_000674 ENSG00000163485 ADORA1 RDC7 adenosine A1 receptor protein-coding chr13-413 chr13 112914274 112914518 + 30.5 0.000 Intergenic Intergenic 54242 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr9-157 chr9 113221290 113221534 + 30.4 0.000 promoter-TSS (NM_015258) promoter-TSS (NM_015258) -132 NM_001859 1317 Hs.532315 NM_001859 ENSG00000136868 SLC31A1 COPT1|CTR1 solute carrier family 31 member 1 protein-coding chr7-652 chr7 105838884 105839128 + 30.4 0.000 intron (NM_152749, intron 2 of 3) intron (NM_152749, intron 2 of 3) 37579 NM_152749 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr19-398 chr19 36528171 36528415 + 30.4 0.000 promoter-TSS (NM_001166037) promoter-TSS (NM_001166037) -22 NM_001166038 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding chr5-358 chr5 395319 395563 + 30.4 0.000 intron (NM_020731, intron 4 of 11) intron (NM_020731, intron 4 of 11) 47719 NR_126522 116349 Hs.446702 NM_138464 ENSG00000221990 EXOC3-AS1 C5orf55 EXOC3 antisense RNA 1 ncRNA chr19-392 chr19 20039307 20039551 + 30.4 0.000 promoter-TSS (NM_033196) promoter-TSS (NM_033196) 76 NM_033196 91120 Hs.306298 NM_033196 ENSG00000197124 ZNF682 BC39498_3 zinc finger protein 682 protein-coding chr8-181 chr8 143276213 143276457 + 30.4 0.000 exon (NM_138465, exon 4 of 4) exon (NM_138465, exon 4 of 4) 5365 NR_120683 100507316 Hs.446671 NR_120682 ENSG00000253716 MINCR LINC01604 MYC-induced long non-coding RNA ncRNA chr2-1485 chr2 75789149 75789393 + 30.4 0.000 Intergenic L2a|LINE|L2 -78356 NM_003203 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding chr20-48 chr20 33686424 33686668 + 30.4 0.000 promoter-TSS (NM_005225) promoter-TSS (NM_005225) -161 NM_005225 1869 Hs.654393 NM_005225 ENSG00000101412 E2F1 E2F-1|RBAP1|RBBP3|RBP3 E2F transcription factor 1 protein-coding chr16-492 chr16 75340770 75341014 + 30.4 0.000 intron (NM_006324, intron 5 of 6) intron (NM_006324, intron 5 of 6) -72885 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr17-223 chr17 80834251 80834495 + 30.4 0.000 intron (NM_020761, intron 9 of 33) intron (NM_020761, intron 9 of 33) -28741 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr3-594 chr3 81485440 81485684 + 30.4 0.000 Intergenic Intergenic 276083 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr19-661 chr19 3533310 3533554 + 30.4 0.000 intron (NM_001136198, intron 11 of 12) intron (NM_001136198, intron 11 of 12) -5725 NM_001135580 100128569 Hs.664978 NM_001135580 ENSG00000183397 C19orf71 - chromosome 19 open reading frame 71 protein-coding chr17-284 chr17 43006707 43006951 + 30.4 0.000 promoter-TSS (NM_001330230) promoter-TSS (NM_001330230) 45 NM_001330230 3430 Hs.632258 NM_005533 ENSG00000068079 IFI35 IFP35 interferon induced protein 35 protein-coding chr2-419 chr2 205650391 205650635 + 30.4 0.000 Intergenic Intergenic -31987 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr15-275 chr15 38758138 38758382 + 30.4 0.000 Intergenic Intergenic 61662 NR_160786 chr10-142 chr10 921856 922100 + 30.4 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 9727 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr19-522 chr19 49813480 49813724 + 30.4 0.000 promoter-TSS (NM_001352262) promoter-TSS (NM_001352262) -310 NM_001363663 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ CPLANE3|FY|NTD fuzzy planar cell polarity protein protein-coding chr6-250 chr6 53048419 53048663 + 30.4 0.000 intron (NM_014920, intron 1 of 13) intron (NM_014920, intron 1 of 13) 13261 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding chr12-251 chr12 109900205 109900449 + 30.4 0.000 promoter-TSS (NM_032300) promoter-TSS (NM_032300) 53 NM_001143852 84260 Hs.410924 NM_032300 ENSG00000139437 TCHP TpMs trichoplein keratin filament binding protein-coding chr1-1142 chr1 22808382 22808626 + 30.4 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 54722 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr19-476 chr19 58386870 58387114 + 30.4 0.000 promoter-TSS (NM_001009) promoter-TSS (NM_001009) -134 NR_039910 100616168 NR_039910 ENSG00000266640 MIR4754 mir-4754 microRNA 4754 ncRNA chr2-356 chr2 238288864 238289108 + 30.4 0.000 promoter-TSS (NM_022817) promoter-TSS (NM_022817) -376 NM_022817 8864 Hs.58756 NM_003894 ENSG00000132326 PER2 FASPS|FASPS1 period circadian regulator 2 protein-coding chr6-190 chr6 34223818 34224062 + 30.4 0.000 Intergenic Intergenic -12933 NM_145901 3159 Hs.518805 NM_002131 ENSG00000137309 HMGA1 HMG-R|HMGA1A|HMGIY high mobility group AT-hook 1 protein-coding chr15-214 chr15 35827178 35827422 + 30.4 0.000 intron (NR_038251, intron 2 of 2) intron (NR_038251, intron 2 of 2) -99556 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA chr17-509 chr17 63675905 63676149 + 30.4 0.000 intron (NM_203351, intron 7 of 16) intron (NM_203351, intron 7 of 16) 24098 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr9-137 chr9 137255201 137255445 + 30.4 0.000 promoter-TSS (NM_015456) promoter-TSS (NM_015456) -4 NM_015456 25920 Hs.521809 NM_015456 ENSG00000188986 NELFB COBRA1|NELF-B negative elongation factor complex member B protein-coding chr14-95 chr14 102592249 102592493 + 30.4 0.000 promoter-TSS (NM_015156) promoter-TSS (NM_015156) -278 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr19-303 chr19 34501503 34501747 + 30.4 0.000 3' UTR (NM_001080436, exon 8 of 8) 3' UTR (NM_001080436, exon 8 of 8) 19867 NM_001080436 126374 Hs.585010 NM_001080436 ENSG00000142279 WTIP - WT1 interacting protein protein-coding chr2-1287 chr2 102514127 102514371 + 30.4 0.000 exon (NM_001011552, exon 8 of 12) exon (NM_001011552, exon 8 of 12) 41023 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr10-394 chr10 32944251 32944495 + 30.4 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) -8815 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr1-207 chr1 169486000 169486244 + 30.4 0.000 promoter-TSS (NM_001319667) promoter-TSS (NM_001319667) -152 NM_001319667 10560 Hs.30246 NM_006996 ENSG00000117479 SLC19A2 TC1|THMD1|THT1|THTR1|TRMA solute carrier family 19 member 2 protein-coding chr17-125 chr17 35063464 35063708 + 30.4 0.000 5' UTR (NM_001017368, exon 1 of 7) 5' UTR (NM_001017368, exon 1 of 7) 121 NM_001017368 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr1-905 chr1 916854 917098 + 30.4 0.000 non-coding (NR_026874, exon 4 of 4) non-coding (NR_026874, exon 4 of 4) 2716 NR_026874 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr9-484 chr9 110700920 110701164 + 30.2 0.000 intron (NM_001166281, intron 5 of 11) L2|LINE|L2 -27220 NM_001369398 4593 Hs.521653 NM_005592 ENSG00000030304 MUSK CMS9|FADS|FADS1 muscle associated receptor tyrosine kinase protein-coding chr22-212 chr22 40636632 40636876 + 30.2 0.000 promoter-TSS (NM_001282661) promoter-TSS (NM_001282661) -35 NM_001282661 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr16-191 chr16 8868823 8869067 + 30.2 0.000 promoter-TSS (NM_001278261) promoter-TSS (NM_001278261) 61 NM_014316 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr1-781 chr1 168261641 168261885 + 30.2 0.000 Intergenic L2c|LINE|L2 -14333 NR_026844 84832 Hs.537067 NR_026844 ENSG00000214262 ANKRD36BP1 ANKRD26L1|ANKRD36BL1 ankyrin repeat domain 36B pseudogene 1 pseudo chr17-82 chr17 82230943 82231187 + 30.2 0.000 intron (NM_004207, intron 1 of 4) CpG -1167 NM_001042423 9123 Hs.500761 NM_004207 ENSG00000141526 SLC16A3 MCT 3|MCT 4|MCT-3|MCT-4|MCT3|MCT4 solute carrier family 16 member 3 protein-coding chr1-809 chr1 9321304 9321548 + 30.2 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 28532 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr19-335 chr19 40715813 40716057 + 30.2 0.000 promoter-TSS (NM_001142555) promoter-TSS (NM_001142555) -816 NM_001142555 79934 Hs.130712 NM_024876 ENSG00000123815 COQ8B ADCK4|NPHS9 coenzyme Q8B protein-coding chr14-122 chr14 96104812 96105056 + 30.2 0.000 Intergenic Intergenic 65572 NM_001252507 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr1-1166 chr1 55156098 55156342 + 30.2 0.000 intron (NM_015306, intron 12 of 67) L2|LINE|L2 59144 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr12-183 chr12 120302238 120302482 + 30.2 0.000 promoter-TSS (NM_012240) promoter-TSS (NM_012240) 39 NM_012240 23409 Hs.50861 NM_012240 ENSG00000089163 SIRT4 SIR2L4 sirtuin 4 protein-coding chr3-367 chr3 10141786 10142030 + 30.2 0.000 exon (NM_000551, exon 1 of 3) exon (NM_000551, exon 1 of 3) 130 NM_198156 7428 Hs.517792 NM_000551 ENSG00000134086 VHL HRCA1|RCA1|VHL1|pVHL von Hippel-Lindau tumor suppressor protein-coding chr13-223 chr13 21014733 21014977 + 30.2 0.000 intron (NM_014572, intron 2 of 7) intron (NM_014572, intron 2 of 7) 46731 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr2-766 chr2 109335917 109336161 + 30.2 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) -22414 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr19-403 chr19 48333963 48334207 + 30.2 0.000 exon (NM_018273, exon 7 of 8) exon (NM_018273, exon 7 of 8) 8086 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr11-355 chr11 57904502 57904746 + 30.2 0.000 Intergenic AluJb|SINE|Alu -119257 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr10-402 chr10 51879448 51879692 + 30.2 0.000 intron (NM_001098512, intron 4 of 17) intron (NM_001098512, intron 4 of 17) -179975 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding chr11-284 chr11 69010965 69011209 + 30.2 0.000 intron (NM_001098515, intron 1 of 2) intron (NM_001098515, intron 1 of 2) -1267 NR_120541 101928200 Hs.703759 NR_120541 ENSG00000256508 MRGPRF-AS1 - MRGPRF antisense RNA 1 ncRNA chr3-158 chr3 49929702 49929946 + 30.2 0.000 exon (NM_032355, exon 1 of 6) exon (NM_032355, exon 1 of 6) 188 NM_001142501 84315 Hs.655014 NM_032355 ENSG00000164077 MON1A SAND1 MON1 homolog A, secretory trafficking associated protein-coding chr11-1189 chr11 78567277 78567521 + 30.2 0.000 intron (NM_024678, intron 3 of 13) MER44B|DNA|TcMar-Tigger 7465 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr2-1017 chr2 200703224 200703468 + 30.2 0.000 intron (NR_135011, intron 2 of 31) intron (NR_135011, intron 2 of 31) 7623 NR_135012 107161151 Hs.148269 NR_135011 AOX3P-AOX2P AOX3/AOX3L1 AOX3P-AOX2P readthrough, transcribed pseudogene pseudo chr20-279 chr20 51351506 51351750 + 30.2 0.000 Intergenic MER58A|DNA|hAT-Charlie 101349 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr2-68 chr2 231412339 231412583 + 30.2 0.000 Intergenic CpG 16751 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr1-348 chr1 6489990 6490234 + 30.2 0.000 intron (NM_001042663, intron 2 of 21) CpG 468 NM_001042664 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr2-263 chr2 20351109 20351353 + 30.2 0.000 promoter-TSS (NM_001352918) promoter-TSS (NM_001352918) -247 NM_001352918 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr10-248 chr10 80177939 80178183 + 30.1 0.000 intron (NM_001278409, intron 1 of 16) L3|LINE|CR1 26430 NM_001278408 311 Hs.530291 NM_001157 ENSG00000122359 ANXA11 ALS23|ANX11|CAP-50|CAP50 annexin A11 protein-coding chr2-657 chr2 227510496 227510740 + 30.1 0.000 intron (NM_004504, intron 2 of 12) intron (NM_004504, intron 2 of 12) 38446 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr5-276 chr5 176447579 176447823 + 30.1 0.000 promoter-TSS (NM_014613) promoter-TSS (NM_014613) -684 NM_014613 23197 Hs.484242 NM_014613 ENSG00000113194 FAF2 ETEA|UBXD8|UBXN3B Fas associated factor family member 2 protein-coding chr7-194 chr7 74174080 74174324 + 30.1 0.000 promoter-TSS (NM_022170) promoter-TSS (NM_022170) -154 NM_022170 7458 Hs.520943 NM_022170 ENSG00000106682 EIF4H WBSCR1|WSCR1|eIF-4H eukaryotic translation initiation factor 4H protein-coding chr6-95 chr6 36423191 36423435 + 30.1 0.000 intron (NM_152990, intron 3 of 4) CpG -19454 NM_001286580 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding chr17-191 chr17 57085002 57085246 + 30.1 0.000 promoter-TSS (NM_001370425) promoter-TSS (NM_001370425) -122 NM_003488 8165 Hs.463506 NM_003488 ENSG00000121057 AKAP1 AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17 A-kinase anchoring protein 1 protein-coding chr1-862 chr1 110236037 110236281 + 30.1 0.000 3' UTR (NM_004978, exon 4 of 4) 3' UTR (NM_004978, exon 4 of 4) 25845 NM_001039574 3749 Hs.153521 NM_004978 ENSG00000116396 KCNC4 C1orf30|HKSHIIIC|KSHIIIC|KV3.4 potassium voltage-gated channel subfamily C member 4 protein-coding chr1-509 chr1 161749734 161749978 + 30.1 0.000 promoter-TSS (NM_007240) promoter-TSS (NM_007240) 70 NM_007240 11266 Hs.416216 NM_007240 ENSG00000081721 DUSP12 DUSP1|YVH1 dual specificity phosphatase 12 protein-coding chr9-336 chr9 118962074 118962318 + 30.1 0.000 Intergenic MIRb|SINE|MIR 282525 NR_151725 111216287 NR_151725 LINC02578 - long intergenic non-protein coding RNA 2578 ncRNA chr4-569 chr4 187172438 187172682 + 30.1 0.000 Intergenic Intergenic -29426 NR_147159 105377600 Hs.641158 NR_147159 LINC02374 - long intergenic non-protein coding RNA 2374 ncRNA chr18-70 chr18 12420263 12420507 + 30.1 0.000 exon (NM_006553, exon 2 of 7) exon (NM_006553, exon 2 of 7) 196 NM_001142406 10650 Hs.514718 NM_006553 ENSG00000141391 PRELID3A C18orf43|HFL-EDDG1|SLMO1 PRELI domain containing 3A protein-coding chr10-132 chr10 75210291 75210535 + 30.1 0.000 intron (NM_001184823, intron 1 of 9) CpG 259 NM_003375 7417 Hs.355927 NM_003375 ENSG00000165637 VDAC2 POR voltage dependent anion channel 2 protein-coding chr4-84 chr4 151099334 151099578 + 30.1 0.000 promoter-TSS (NM_001006) promoter-TSS (NM_001006) -117 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr3-248 chr3 42582044 42582288 + 30.1 0.000 promoter-TSS (NM_032970) promoter-TSS (NM_032970) -199 NM_004206 9117 Hs.445892 NM_004206 ENSG00000093183 SEC22C SEC22L3 SEC22 homolog C, vesicle trafficking protein protein-coding chr4-427 chr4 119103378 119103622 + 30.1 0.000 Intergenic MIRc|SINE|MIR -32284 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr9-522 chr9 88304153 88304397 + 30.1 0.000 Intergenic MER21-int|LTR|ERVL -84169 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr11-1010 chr11 68659291 68659535 + 30.1 0.000 Intergenic Intergenic -25131 NM_015973 51083 Hs.278959 NM_015973 ENSG00000069482 GAL ETL8|GAL-GMAP|GALN|GLNN|GMAP galanin and GMAP prepropeptide protein-coding chr17-559 chr17 64649240 64649484 + 30.1 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 12945 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr7-620 chr7 18895467 18895711 + 30.1 0.000 intron (NM_058176, intron 21 of 22) intron (NM_058176, intron 21 of 22) 222047 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr9-307 chr9 117783097 117783341 + 30.1 0.000 Intergenic Intergenic 78816 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr5-128 chr5 14143006 14143250 + 30.1 0.000 promoter-TSS (NR_134469) promoter-TSS (NR_134469) -214 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr6-165 chr6 158003265 158003509 + 30.1 0.000 intron (NM_003898, intron 1 of 26) intron (NM_003898, intron 1 of 26) 2280 NR_046796 100874300 Hs.742238 NR_046796 ENSG00000233496 SYNJ2-IT1 - SYNJ2 intronic transcript 1 ncRNA chr9-267 chr9 136483837 136484081 + 30.1 0.000 promoter-TSS (NM_001276418) promoter-TSS (NM_001276418) -200 NM_001276418 9919 Hs.522500 NM_014866 ENSG00000148396 SEC16A KIAA0310|SEC16L|p250 SEC16 homolog A, endoplasmic reticulum export factor protein-coding chr2-193 chr2 165953775 165954019 + 30.1 0.000 promoter-TSS (NM_024753) promoter-TSS (NM_024753) -121 NM_024753 79809 Hs.310672 NM_024753 ENSG00000123607 TTC21B ATD4|IFT139|IFT139B|JBTS11|NPHP12|Nbla10696|SRTD4|THM1 tetratricopeptide repeat domain 21B protein-coding chr2-236 chr2 231714002 231714246 + 30.1 0.000 TTS (NR_036052).4 TTS (NR_036052).4 810 NR_128710 103504734 NR_128710 ENSG00000283475 MIR1244-4 hsa-mir-1244-4 microRNA 1244-4 ncRNA chr2-483 chr2 10283242 10283486 + 30.1 0.000 Intergenic Intergenic -19540 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr16-245 chr16 70691875 70692119 + 30.1 0.000 intron (NM_001351157, intron 17 of 17) intron (NM_001351157, intron 17 of 17) -5944 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr18-118 chr18 58721548 58721792 + 30.1 0.000 intron (NM_006785, intron 9 of 16) intron (NM_006785, intron 9 of 16) -49797 NM_001289967 101927322 Hs.644875 NM_001289967 LOC101927322 - uncharacterized LOC101927322 protein-coding chr9-405 chr9 134683450 134683694 + 30.1 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -30729 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr11-319 chr11 85647902 85648146 + 30.1 0.000 promoter-TSS (NM_032273) promoter-TSS (NM_032273) 57 NM_032273 84233 Hs.533725 NM_032273 ENSG00000171202 TMEM126A OPA7 transmembrane protein 126A protein-coding chr3-625 chr3 167814522 167814766 + 30.1 0.000 intron (NM_001122752, intron 6 of 8) intron (NM_001122752, intron 6 of 8) 78921 NM_005025 5274 Hs.478153 NM_005025 ENSG00000163536 SERPINI1 PI12|neuroserpin serpin family I member 1 protein-coding chr14-74 chr14 105197165 105197409 + 29.9 0.000 Intergenic Intergenic -15964 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr12-272 chr12 49705667 49705911 + 29.9 0.000 intron (NM_001367835, intron 1 of 26) intron (NM_001367835, intron 1 of 26) 1616 NM_001367835 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr5-317 chr5 127029808 127030052 + 29.9 0.000 intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 628 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding chr9-247 chr9 95096348 95096592 + 29.9 0.000 Intergenic L2|LINE|L2 -10376 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr11-1435 chr11 23897487 23897731 + 29.9 0.000 Intergenic Intergenic -478419 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA chr1-1372 chr1 95087276 95087520 + 29.9 0.000 Intergenic Intergenic -5119 NM_001199679 148534 Hs.483512 NM_152487 ENSG00000152078 TLCD4 TMEM56 TLC domain containing 4 protein-coding chr14-209 chr14 34875304 34875548 + 29.9 0.000 promoter-TSS (NM_182648) promoter-TSS (NM_182648) -66 NM_182648 11177 Hs.509140 NM_013448 ENSG00000198604 BAZ1A ACF1|WALp1|WCRF180|hACF1 bromodomain adjacent to zinc finger domain 1A protein-coding chr1-343 chr1 216601076 216601320 + 29.9 0.000 intron (NM_001243505, intron 3 of 6) CpG 122231 NM_001243518 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chr8-42 chr8 125430130 125430374 + 29.9 0.000 promoter-TSS (NM_025195) promoter-TSS (NM_025195) -106 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr11-417 chr11 12175992 12176236 + 29.9 0.000 intron (NR_144420, intron 3 of 27) L4_C_Mam|LINE|RTE-X 12431 NR_106739 102466906 NR_106739 ENSG00000275373 MIR6124 hsa-mir-6124 microRNA 6124 ncRNA chr1-687 chr1 19011017 19011261 + 29.9 0.000 Intergenic Intergenic -54463 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr2-425 chr2 231227333 231227577 + 29.9 0.000 intron (NM_001352757, intron 7 of 19) intron (NM_001352757, intron 7 of 19) 28824 NM_001352758 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr16-1120 chr16 53768628 53768872 + 29.9 0.000 intron (NM_001363897, intron 1 of 7) UCON8|DNA|DNA 64594 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding chr1-171 chr1 3796349 3796593 + 29.9 0.000 promoter-TSS (NM_020710) promoter-TSS (NM_020710) 27 NM_020710 57470 Hs.268488 NM_020710 ENSG00000130764 LRRC47 - leucine rich repeat containing 47 protein-coding chr1-804 chr1 3219304 3219548 + 29.9 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 91451 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr2-337 chr2 46985234 46985478 + 29.9 0.000 intron (NM_001288951, intron 5 of 20) intron (NM_001288951, intron 5 of 20) -43501 NM_001171508 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr8-521 chr8 120373040 120373284 + 29.9 0.000 3' UTR (NM_021110, exon 48 of 48) 3' UTR (NM_021110, exon 48 of 48) 71988 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chrX-10 chrX 153470482 153470726 + 29.9 0.000 promoter-TSS (NM_017518) promoter-TSS (NM_017518) 27 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr3-546 chr3 187227852 187228096 + 29.9 0.000 intron (NM_001879, intron 11 of 15) intron (NM_001879, intron 11 of 15) -20345 NR_110052 101929106 Hs.640145 NR_110052 ENSG00000198491 LOC101929106 - uncharacterized LOC101929106 ncRNA chr20-216 chr20 57947922 57948166 + 29.9 0.000 Intergenic Intergenic -55860 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr4-326 chr4 76624334 76624578 + 29.9 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 48905 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr5-473 chr5 96808350 96808594 + 29.9 0.000 promoter-TSS (NM_001040458) promoter-TSS (NM_001040458) -283 NM_001349244 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr20-71 chr20 50790603 50790847 + 29.9 0.000 Intergenic Intergenic -4169 NM_001010974 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr8-696 chr8 140916121 140916365 + 29.9 0.000 intron (NM_001352700, intron 1 of 34) intron (NM_001352700, intron 1 of 34) 84761 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr10-483 chr10 125234638 125234882 + 29.9 0.000 Intergenic L1ME4a|LINE|L1 -73730 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr1-604 chr1 150876703 150876947 + 29.9 0.000 promoter-TSS (NM_001350226) promoter-TSS (NM_001350226) -226 NM_001350226 405 Hs.632446 NM_001668 ENSG00000143437 ARNT HIF-1-beta|HIF-1beta|HIF1-beta|HIF1B|HIF1BETA|TANGO|bHLHe2 aryl hydrocarbon receptor nuclear translocator protein-coding chr5-311 chr5 96823923 96824167 + 29.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -9900 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr7-784 chr7 121084900 121085144 + 29.9 0.000 intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 95631 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding chr2-359 chr2 39120874 39121118 + 29.9 0.000 promoter-TSS (NM_005633) promoter-TSS (NM_005633) -533 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr8-300 chr8 85245464 85245708 + 29.9 0.000 5' UTR (NM_198584, exon 1 of 7) 5' UTR (NM_198584, exon 1 of 7) 128 NM_198584 377677 Hs.127189 NM_198584 ENSG00000185015 CA13 CAXIII carbonic anhydrase 13 protein-coding chr8-72 chr8 96493546 96493790 + 29.9 0.000 promoter-TSS (NM_002998) promoter-TSS (NM_002998) -145 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr2-250 chr2 70994814 70995058 + 29.9 0.000 promoter-TSS (NM_144582) promoter-TSS (NM_144582) -63 NM_144582 113419 Hs.516087 NM_144582 ENSG00000144043 TEX261 TEG-261 testis expressed 261 protein-coding chr20-72 chr20 63973865 63974109 + 29.9 0.000 TTS (NM_080621) TTS (NM_080621) -4057 NM_020713 57473 Hs.740578 NM_020713 ENSG00000196700 ZNF512B GM632 zinc finger protein 512B protein-coding chr9-145 chr9 133738225 133738469 + 29.9 0.000 promoter-TSS (NM_001134707) promoter-TSS (NM_001134707) 5 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr1-450 chr1 216221252 216221496 + 29.9 0.000 intron (NM_206933, intron 14 of 71) intron (NM_206933, intron 14 of 71) 148909 NR_125992 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA chr8-187 chr8 25188341 25188585 + 29.8 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 3774 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr17-301 chr17 81121027 81121271 + 29.8 0.000 exon (NM_004920, exon 10 of 13) exon (NM_004920, exon 10 of 13) 4224 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr2-761 chr2 98149244 98149488 + 29.8 0.000 promoter-TSS (NM_001345864) promoter-TSS (NM_001345864) -167 NM_001345864 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding chr5-106 chr5 134738282 134738526 + 29.8 0.000 promoter-TSS (NM_001745) promoter-TSS (NM_001745) -144 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr2-1003 chr2 177799580 177799824 + 29.8 0.000 intron (NM_001077197, intron 10 of 20) L1M6|LINE|L1 89054 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr19-695 chr19 39473151 39473395 + 29.8 0.000 exon (NM_001319990, exon 24 of 30) exon (NM_001319990, exon 24 of 30) 5051 NR_145805 109623469 NR_145805 SNORD175 - small nucleolar RNA, C/D box 175 snoRNA chr9-306 chr9 117745034 117745278 + 29.8 0.000 Intergenic CpG 40753 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr6-258 chr6 127420539 127420783 + 29.8 0.000 Intergenic Intergenic 38728 NM_014702 9729 Hs.319247 NM_014702 ENSG00000189367 KIAA0408 - KIAA0408 protein-coding chr14-213 chr14 53391731 53391975 + 29.8 0.000 Intergenic Intergenic 238499 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr3-853 chr3 103454054 103454298 + 29.8 0.000 Intergenic Intergenic 69940 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr3-137 chr3 61251491 61251735 + 29.8 0.000 promoter-TSS (NM_001166243) promoter-TSS (NM_001166243) -152 NR_148921 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr12-343 chr12 106030395 106030639 + 29.8 0.000 Intergenic Intergenic 109516 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr20-83 chr20 24634847 24635091 + 29.8 0.000 intron (NM_024893, intron 3 of 3) intron (NM_024893, intron 3 of 3) 165008 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding chr10-207 chr10 114306602 114306846 + 29.8 0.000 intron (NM_001001936, intron 10 of 18) intron (NM_001001936, intron 10 of 18) 67110 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding chr16-306 chr16 19523700 19523944 + 29.8 0.000 promoter-TSS (NM_001323569) promoter-TSS (NM_001323569) -120 NM_001323570 9738 Hs.279912 NM_014711 ENSG00000103540 CCP110 CP110|Cep110 centriolar coiled-coil protein 110 protein-coding chr11-763 chr11 105035042 105035286 + 29.8 0.000 promoter-TSS (NM_033293) promoter-TSS (NM_033293) -7 NM_033294 834 Hs.2490 NM_001223 ENSG00000137752 CASP1 ICE|IL1BC|P45 caspase 1 protein-coding chr13-103 chr13 44436763 44437007 + 29.8 0.000 promoter-TSS (NM_006022) promoter-TSS (NM_006022) -27 NM_006022 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr8-451 chr8 90645878 90646122 + 29.8 0.000 promoter-TSS (NM_001146273) promoter-TSS (NM_001146273) 83 NM_001008495 169200 Hs.567759 NM_001008495 ENSG00000180694 TMEM64 - transmembrane protein 64 protein-coding chr22-190 chr22 19171319 19171563 + 29.8 0.000 promoter-TSS (NR_103767) promoter-TSS (NR_103767) -265 NR_103767 100652736 Hs.572896 NR_103767 LINC01311 - long intergenic non-protein coding RNA 1311 ncRNA chr18-106 chr18 564963 565207 + 29.8 0.000 Intergenic Intergenic -15295 NM_004066 1068 Hs.122511 NM_004066 ENSG00000177143 CETN1 CEN1|CETN centrin 1 protein-coding chrX-69 chrX 109714465 109714709 + 29.8 0.000 intron (NM_004458, intron 1 of 15) Tigger3|DNA|TcMar-Tigger -17924 NR_158569 105373311 Hs.268785 NR_158569 LOC105373311 - uncharacterized LOC105373311 ncRNA chr6-295 chr6 142152787 142153031 + 29.8 0.000 intron (NM_001286372, intron 1 of 5) L2c|LINE|L2 5646 NM_016485 51534 Hs.431367 NM_016485 ENSG00000009844 VTA1 C6orf55|DRG-1|DRG1|HSPC228|LIP5|My012|SBP1 vesicle trafficking 1 protein-coding chr14-529 chr14 52355306 52355550 + 29.8 0.000 Intergenic Intergenic 41116 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr12-321 chr12 31959216 31959460 + 29.8 0.000 promoter-TSS (NM_018169) promoter-TSS (NM_018169) -77 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chrX-76 chrX 48676378 48676622 + 29.8 0.000 Intergenic CpG -7297 NM_000377 7454 Hs.2157 NM_000377 ENSG00000015285 WAS IMD2|SCNX|THC|THC1|WASP|WASPA WASP actin nucleation promoting factor protein-coding chr8-397 chr8 66713495 66713739 + 29.8 0.000 intron (NM_001033578, intron 1 of 16) intron (NM_001033578, intron 1 of 16) 836 NM_001033578 23678 Hs.613417 NM_013257 ENSG00000104205 SGK3 CISK|SGK2|SGKL serum/glucocorticoid regulated kinase family member 3 protein-coding chr17-209 chr17 28719693 28719937 + 29.8 0.000 promoter-TSS (NR_000013) promoter-TSS (NR_000013) -170 NM_000984 6147 Hs.419463 NM_000984 ENSG00000198242 RPL23A L23A|MDA20 ribosomal protein L23a protein-coding chr5-264 chr5 57599002 57599246 + 29.6 0.000 intron (NR_120607, intron 4 of 5) intron (NR_120607, intron 4 of 5) 28782 NR_120607 100996645 Hs.582496 NR_120607 LINCR-0003 - uncharacterized LincR-0003 ncRNA chrX-85 chrX 149630762 149631006 + 29.6 0.000 intron (NM_032508, intron 1 of 6) MIRb|SINE|MIR 908 NR_104121 84548 Hs.522172 NM_032508 ENSG00000269556 TMEM185A CXorf13|FAM11A|FRAXF|ee3 transmembrane protein 185A protein-coding chr7-165 chr7 100100571 100100815 + 29.6 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) 87 NM_182776 4176 Hs.438720 NM_005916 ENSG00000166508 MCM7 CDC47|MCM2|P1.1-MCM3|P1CDC47|P85MCM|PNAS146|PPP1R104 minichromosome maintenance complex component 7 protein-coding chr11-372 chr11 104859412 104859656 + 29.6 0.000 Intergenic Intergenic 39136 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr4-380 chr4 140237859 140238103 + 29.6 0.000 Intergenic Intergenic -19327 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr2-523 chr2 210476570 210476814 + 29.6 0.000 promoter-TSS (NM_001136575) promoter-TSS (NM_001136575) 13 NM_001136574 10314 Hs.13351 NM_006055 ENSG00000115365 LANCL1 GPR69A|p40 LanC like 1 protein-coding chr3-551 chr3 9316940 9317184 + 29.6 0.000 Intergenic Intergenic -45992 NM_015453 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr19-555 chr19 36418658 36418902 + 29.6 0.000 promoter-TSS (NM_001321919) promoter-TSS (NM_001321919) -136 NM_133466 284406 Hs.558734 NM_133466 ENSG00000181007 ZFP82 ZNF545 ZFP82 zinc finger protein protein-coding chr3-371 chr3 63343869 63344113 + 29.6 0.000 intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) 65683 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding chr1-1362 chr1 85850237 85850481 + 29.6 0.000 intron (NM_152890, intron 37 of 59) intron (NM_152890, intron 37 of 59) -141926 NM_017953 54680 Hs.5111 NM_017953 ENSG00000117174 ZNHIT6 BCD1|C1orf181|NY-BR-75 zinc finger HIT-type containing 6 protein-coding chr6-331 chr6 145016068 145016312 + 29.6 0.000 Intergenic Intergenic 610535 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr20-137 chr20 12928975 12929219 + 29.6 0.000 intron (NR_109868, intron 4 of 11) intron (NR_109868, intron 4 of 11) 7866 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA chr6-302 chr6 25992641 25992885 + 29.6 0.000 Intergenic CpG 25049 NM_005325 3024 Hs.150206 NM_005325 ENSG00000124610 HIST1H1A H1.1|H1A|H1F1|HIST1 histone cluster 1 H1 family member a protein-coding chr5-147 chr5 42423435 42423679 + 29.6 0.000 promoter-TSS (NM_001242399) promoter-TSS (NM_001242399) 118 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding chr6-321 chr6 75098749 75098993 + 29.6 0.000 intron (NM_080645, intron 43 of 50) intron (NM_080645, intron 43 of 50) 29911 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr7-527 chr7 123747595 123747839 + 29.6 0.000 intron (NM_003941, intron 1 of 10) intron (NM_003941, intron 1 of 10) 1286 NM_003941 8976 Hs.143728 NM_003941 ENSG00000106299 WASL N-WASP|NWASP|WASPB WASP like actin nucleation promoting factor protein-coding chr12-759 chr12 82608825 82609069 + 29.6 0.000 Intergenic Intergenic -77959 NM_001320321 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr16-823 chr16 57194637 57194881 + 29.6 0.000 intron (NM_001305163, intron 1 of 14) intron (NM_001305163, intron 1 of 14) 8430 NM_001305163 89970 Hs.460885 NM_133368 ENSG00000159579 RSPRY1 SEMDFA ring finger and SPRY domain containing 1 protein-coding chr20-350 chr20 62258579 62258823 + 29.6 0.000 intron (NM_001278649, intron 2 of 12) intron (NM_001278649, intron 2 of 12) 20180 NM_014835 9885 Hs.473254 NM_014835 ENSG00000130703 OSBPL2 DFNA67|DNFA67|ORP-2|ORP2 oxysterol binding protein like 2 protein-coding chr7-266 chr7 41921269 41921513 + 29.6 0.000 Intergenic Intergenic -218301 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr6-319 chr6 73369301 73369545 + 29.6 0.000 intron (NM_001080507, intron 1 of 2) intron (NM_001080507, intron 1 of 2) 369 NM_001080507 441161 Hs.671212 NM_001080507 ENSG00000203907 OOEP C6orf156|FLOPED|HOEP19|KHDC2 oocyte expressed protein protein-coding chr16-314 chr16 56477172 56477416 + 29.6 0.000 3' UTR (NM_018233, exon 13 of 13) 3' UTR (NM_018233, exon 13 of 13) 25210 NM_001324358 55239 Hs.231883 NM_018233 ENSG00000087263 OGFOD1 TPA1 2-oxoglutarate and iron dependent oxygenase domain containing 1 protein-coding chr9-234 chr9 134722440 134722684 + 29.6 0.000 intron (NM_001278074, intron 4 of 65) intron (NM_001278074, intron 4 of 65) -69719 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr18-102 chr18 28115199 28115443 + 29.6 0.000 intron (NM_001792, intron 2 of 15) intron (NM_001792, intron 2 of 15) 61809 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr19-536 chr19 4455049 4455293 + 29.6 0.000 intron (NM_025241, intron 1 of 10) intron (NM_025241, intron 1 of 10) 130 NM_001171091 80700 Hs.435255 NM_025241 ENSG00000167671 UBXN6 UBXD1|UBXDC2 UBX domain protein 6 protein-coding chr1-730 chr1 199684701 199684945 + 29.6 0.000 Intergenic Intergenic -342887 NM_003822 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding chr7-578 chr7 87414081 87414325 + 29.6 0.000 intron (NM_018849, intron 21 of 27) intron (NM_018849, intron 21 of 27) 61477 NM_000443 5244 Hs.654403 NM_000443 ENSG00000005471 ABCB4 ABC21|GBD1|ICP3|MDR2|MDR2/3|MDR3|PFIC-3|PGY3 ATP binding cassette subfamily B member 4 protein-coding chr5-256 chr5 10590809 10591053 + 29.6 0.000 intron (NM_001164440, intron 1 of 3) L1MEg|LINE|L1 26861 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr3-83 chr3 129121965 129122209 + 29.6 0.000 promoter-TSS (NM_001204888) promoter-TSS (NM_001204888) 63 NM_001204883 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr20-9 chr20 56358739 56358983 + 29.6 0.000 promoter-TSS (NM_080821) promoter-TSS (NM_080821) -113 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr11-537 chr11 120807638 120807882 + 29.6 0.000 intron (NM_001282470, intron 3 of 19) intron (NM_001282470, intron 3 of 19) 11355 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chr6-214 chr6 132814192 132814436 + 29.6 0.000 promoter-TSS (NR_002434) promoter-TSS (NR_002434) -255 NM_001016 6206 Hs.546289 NM_001016 ENSG00000112306 RPS12 S12 ribosomal protein S12 protein-coding chr14-277 chr14 96145655 96145899 + 29.5 0.000 Intergenic Charlie25|DNA|hAT-Charlie -59021 NM_000623 624 Hs.654542 NM_000623 ENSG00000168398 BDKRB2 B2R|BK-2|BK2|BKR2|BRB2 bradykinin receptor B2 protein-coding chr9-85 chr9 136944103 136944347 + 29.5 0.000 intron (NM_018998, intron 1 of 8) CpG-29168 513 NM_018998 54461 Hs.522507 NM_018998 ENSG00000159069 FBXW5 Fbw5 F-box and WD repeat domain containing 5 protein-coding chr8-340 chr8 40174766 40175010 + 29.5 0.000 Intergenic Intergenic 21406 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr11-387 chr11 46649329 46649573 + 29.5 0.000 intron (NM_001346358, intron 5 of 16) intron (NM_001346358, intron 5 of 16) 32175 NM_001205119 9776 Hs.127403 NM_014741 ENSG00000175224 ATG13 KIAA0652|PARATARG8 autophagy related 13 protein-coding chr5-766 chr5 87412768 87413012 + 29.5 0.000 promoter-TSS (NM_001364076) promoter-TSS (NM_001364076) 14 NM_001199189 902 Hs.292524 NM_001239 ENSG00000134480 CCNH CAK|CycH|p34|p37 cyclin H protein-coding chr1-2092 chr1 169538983 169539227 + 29.5 0.000 intron (NM_000130, intron 13 of 24) intron (NM_000130, intron 13 of 24) 47426 NM_000130 2153 Hs.30054 NM_000130 ENSG00000198734 F5 FVL|PCCF|RPRGL1|THPH2 coagulation factor V protein-coding chr16-161 chr16 2968966 2969210 + 29.5 0.000 promoter-TSS (NM_152341) promoter-TSS (NM_152341) -260 NM_152341 124222 Hs.351474 NM_152341 ENSG00000162073 PAQR4 - progestin and adipoQ receptor family member 4 protein-coding chr12-710 chr12 127272939 127273183 + 29.5 0.000 Intergenic Intergenic 11222 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr3-346 chr3 124504411 124504655 + 29.5 0.000 intron (NM_001024660, intron 33 of 59) intron (NM_001024660, intron 33 of 59) -80125 NM_001322998 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding chr10-393 chr10 30638119 30638363 + 29.5 0.000 Intergenic Intergenic -8488 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr10-312 chr10 17787613 17787857 + 29.5 0.000 intron (NM_001098844, intron 3 of 3) L2b|LINE|L2 -21613 NM_002438 4360 Hs.75182 NM_002438 ENSG00000260314 MRC1 CD206|CLEC13D|CLEC13DL|MMR|MRC1L1|bA541I19.1|hMR mannose receptor C-type 1 protein-coding chr4-463 chr4 77579393 77579637 + 29.5 0.000 intron (NM_006419, intron 1 of 4) intron (NM_006419, intron 1 of 4) 67762 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding chr16-418 chr16 4067449 4067693 + 29.5 0.000 intron (NM_001116, intron 2 of 10) intron (NM_001116, intron 2 of 10) 48871 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding chr16-140 chr16 66549880 66550124 + 29.5 0.000 exon (NM_004614, exon 1 of 10) exon (NM_004614, exon 1 of 10) 120 NM_001272050 7084 Hs.512619 NM_004614 ENSG00000166548 TK2 MTDPS2|MTTK|PEOB3|SCA31 thymidine kinase 2 protein-coding chr11-243 chr11 73309191 73309435 + 29.5 0.000 promoter-TSS (NR_147696) promoter-TSS (NR_147696) 48 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr17-342 chr17 47279215 47279459 + 29.5 0.000 intron (NM_000212, intron 2 of 14) intron (NM_000212, intron 2 of 14) 25495 NM_000212 3690 Hs.218040 NM_000212 ENSG00000259207 ITGB3 BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT integrin subunit beta 3 protein-coding chr8-466 chr8 17051245 17051489 + 29.5 0.000 intron (NR_146233, intron 1 of 15) L2a|LINE|L2 24129 NR_146233 286097 Hs.403594 NM_181723 ENSG00000155970 MICU3 EFHA2 mitochondrial calcium uptake family member 3 protein-coding chr16-112 chr16 48365829 48366073 + 29.5 0.000 promoter-TSS (NM_001006610) promoter-TSS (NM_001006610) -64 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr3-390 chr3 14526030 14526274 + 29.5 0.000 intron (NM_001080423, intron 1 of 23) MIRc|SINE|MIR 14190 NM_001080423 80852 Hs.517819 NM_001080423 ENSG00000144596 GRIP2 - glutamate receptor interacting protein 2 protein-coding chr2-982 chr2 119492216 119492460 + 29.5 0.000 intron (NM_002980, intron 2 of 12) intron (NM_002980, intron 2 of 12) 15884 NR_147846 107105282 Hs.670673 NR_147846 ENSG00000231013 LOC107105282 - uncharacterized LOC107105282 ncRNA chr5-329 chr5 168366265 168366509 + 29.5 0.000 intron (NM_001161661, intron 1 of 22) intron (NM_001161661, intron 1 of 22) 74742 NM_001161662 23286 Hs.484047 NM_015238 ENSG00000113645 WWC1 HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168 WW and C2 domain containing 1 protein-coding chr9-274 chr9 94140094 94140338 + 29.5 0.000 Intergenic Intergenic -35741 NR_029476 406881 NR_029476 ENSG00000199165 MIRLET7A1 LET7A1|MIRNLET7A1|let-7a-1 microRNA let-7a-1 ncRNA chr8-352 chr8 101501403 101501647 + 29.5 0.000 intron (NM_001330593, intron 1 of 15) GA-rich|Low_complexity|Low_complexity 9086 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr10-284 chr10 133520237 133520481 + 29.5 0.000 Intergenic CpG -7004 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr6-210 chr6 57090059 57090303 + 29.5 0.000 promoter-TSS (NM_001031623) promoter-TSS (NM_001031623) -7 NM_001031623 26036 Hs.485628 NM_015555 ENSG00000112200 ZNF451 COASTER|dJ417I1.1 zinc finger protein 451 protein-coding chr4-156 chr4 122099915 122100159 + 29.5 0.000 Intergenic Charlie7|DNA|hAT-Charlie -70566 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding chr2-499 chr2 100742389 100742633 + 29.3 0.000 Intergenic Intergenic -77628 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr2-414 chr2 176491236 176491480 + 29.3 0.000 Intergenic Intergenic 109694 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr5-71 chr5 43483770 43484014 + 29.3 0.000 promoter-TSS (NM_022483) promoter-TSS (NM_022483) -27 NM_022483 64417 Hs.732093 NM_022483 ENSG00000151881 TMEM267 C5orf28 transmembrane protein 267 protein-coding chr4-543 chr4 119524995 119525239 + 29.3 0.000 intron (NM_033437, intron 12 of 20) L2c|LINE|L2 70334 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr14-128 chr14 95157587 95157831 + 29.3 0.000 promoter-TSS (NM_177438) promoter-TSS (NM_177438) 21 NR_015415 400242 Hs.497573 NM_207443 ENSG00000235706 DICER1-AS1 DICER1-AS DICER1 antisense RNA 1 ncRNA chr3-1182 chr3 182908425 182908669 + 29.3 0.000 intron (NM_014616, intron 28 of 29) intron (NM_014616, intron 28 of 29) 71991 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr20-337 chr20 44204195 44204439 + 29.3 0.000 intron (NM_016470, intron 2 of 3) intron (NM_016470, intron 2 of 3) 6454 NM_016470 51526 Hs.75798 NM_016470 ENSG00000132823 OSER1 C20orf111|HSPC207|Osr1|Perit1|dJ1183I21.1 oxidative stress responsive serine rich 1 protein-coding chr16-370 chr16 70760703 70760947 + 29.3 0.000 intron (NR_034083, intron 2 of 5) intron (NR_034083, intron 2 of 5) 5730 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr2-496 chr2 85248756 85249000 + 29.3 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 35226 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr13-114 chr13 40504183 40504427 + 29.3 0.000 Intergenic Intergenic -23299 NR_024505 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr12-139 chr12 32679341 32679585 + 29.3 0.000 exon (NM_012062, exon 1 of 20) exon (NM_012062, exon 1 of 20) 162 NM_012062 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding chr3-482 chr3 58014306 58014550 + 29.3 0.000 intron (NM_001164318, intron 1 of 45) L3|LINE|CR1 6006 NM_001164318 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr1-1057 chr1 97094294 97094538 + 29.3 0.000 intron (NM_000110, intron 21 of 22) L2|LINE|L2 -1507 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA chr4-247 chr4 159103018 159103262 + 29.3 0.000 promoter-TSS (NM_001351724) promoter-TSS (NM_001351724) -911 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr19-689 chr19 33110267 33110511 + 29.3 0.000 intron (NR_135270, intron 11 of 20) intron (NR_135270, intron 11 of 20) -21725 NM_173479 126248 Hs.211046 NM_173479 ENSG00000166359 WDR88 PQWD WD repeat domain 88 protein-coding chr17-277 chr17 17280774 17281018 + 29.3 0.000 promoter-TSS (NM_001199125) promoter-TSS (NM_001199125) -198 NM_001199125 8533 Hs.6076 NM_003653 ENSG00000141030 COPS3 CSN3|SGN3 COP9 signalosome subunit 3 protein-coding chr4-548 chr4 127809265 127809509 + 29.3 0.000 intron (NM_001317383, intron 10 of 17) intron (NM_001317383, intron 10 of 17) 25864 NM_001317382 22824 Hs.135554 NM_014278 ENSG00000164070 HSPA4L APG-1|HSPH3|Osp94 heat shock protein family A (Hsp70) member 4 like protein-coding chr7-251 chr7 122144105 122144349 + 29.3 0.000 promoter-TSS (NM_005763) promoter-TSS (NM_005763) 22 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr11-665 chr11 65291707 65291951 + 29.3 0.000 intron (NM_002689, intron 13 of 17) intron (NM_002689, intron 13 of 17) -23037 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr1-1819 chr1 115929919 115930163 + 29.3 0.000 intron (NR_125970, intron 2 of 4) intron (NR_125970, intron 2 of 4) 10665 NR_125969 101928995 Hs.559119 NR_125969 ENSG00000228127 LINC01649 - long intergenic non-protein coding RNA 1649 ncRNA chr9-283 chr9 134526460 134526704 + 29.3 0.000 Intergenic Intergenic -115223 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr12-491 chr12 120234914 120235158 + 29.3 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 15127 NM_025157 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr2-1883 chr2 186575342 186575586 + 29.3 0.000 Intergenic Intergenic -14592 NM_001145000 3685 Hs.436873 NM_002210 ENSG00000138448 ITGAV CD51|MSK8|VNRA|VTNR integrin subunit alpha V protein-coding chr12-302 chr12 77300204 77300448 + 29.3 0.000 Intergenic Intergenic -234757 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr11-436 chr11 68013051 68013295 + 29.3 0.000 intron (NM_001030010, intron 1 of 8) intron (NM_001030010, intron 1 of 8) 2846 NM_001290059 221 Hs.523841 NM_000694 ENSG00000006534 ALDH3B1 ALDH4|ALDH7 aldehyde dehydrogenase 3 family member B1 protein-coding chr14-215 chr14 64823243 64823487 + 29.3 0.000 promoter-TSS (NM_001024858) promoter-TSS (NM_001024858) 15 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding chr5-237 chr5 123036680 123036924 + 29.3 0.000 promoter-TSS (NM_000943) promoter-TSS (NM_000943) -77 NM_000943 5480 Hs.110364 NM_000943 ENSG00000168938 PPIC CYPC peptidylprolyl isomerase C protein-coding chr1-380 chr1 28972450 28972694 + 29.3 0.000 intron (NM_001166006, intron 1 of 14) intron (NM_001166006, intron 1 of 14) 57996 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr7-399 chr7 130794477 130794721 + 29.3 0.000 Intergenic MER51B|LTR|ERV1 -60566 NM_138693 136259 Hs.125240 NM_138693 ENSG00000266265 KLF14 BTEB5 Kruppel like factor 14 protein-coding chr16-705 chr16 3587661 3587905 + 29.3 0.000 intron (NM_032444, intron 12 of 14) intron (NM_032444, intron 12 of 14) -10380 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chrX-29 chrX 130903108 130903352 + 29.3 0.000 promoter-TSS (NM_182314) promoter-TSS (NM_182314) 87 NM_182314 10495 Hs.171458 NM_006375 ENSG00000165675 ENOX2 APK1|COVA1|tNOX ecto-NOX disulfide-thiol exchanger 2 protein-coding chr17-214 chr17 57903203 57903447 + 29.3 0.000 promoter-TSS (NM_001292025) promoter-TSS (NM_001292025) 64 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr11-408 chr11 727998 728242 + 29.2 0.000 TTS (NM_022772) TTS (NM_022772) -19344 NM_006755 6888 Hs.438678 NM_006755 ENSG00000177156 TALDO1 TAL|TAL-H|TALDOR|TALH transaldolase 1 protein-coding chr11-606 chr11 36747161 36747405 + 29.2 0.000 Intergenic Intergenic -149004 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding chr10-468 chr10 62374101 62374345 + 29.2 0.000 promoter-TSS (NM_199450) promoter-TSS (NM_199450) 66 NM_199450 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr10-146 chr10 789488 789732 + 29.2 0.000 Intergenic Intergenic -99942 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr19-599 chr19 42480762 42481006 + 29.2 0.000 intron (NR_073179, intron 1 of 1) LOR1b|LTR|ERV1 -37938 NM_198477 284340 Hs.445586 NM_198477 ENSG00000189377 CXCL17 DMC|Dcip1|UNQ473|VCC-1|VCC1 C-X-C motif chemokine ligand 17 protein-coding chr2-412 chr2 169824686 169824930 + 29.2 0.000 promoter-TSS (NM_014168) promoter-TSS (NM_014168) 97 NM_014168 29081 Hs.470553 NM_014168 ENSG00000138382 METTL5 HSPC133 methyltransferase like 5 protein-coding chr4-141 chr4 7068012 7068256 + 29.2 0.000 promoter-TSS (NM_025196) promoter-TSS (NM_025196) -70 NM_025196 80273 Hs.443723 NM_025196 ENSG00000109519 GRPEL1 GrpE|HMGE|mt-GrpE#1 GrpE like 1, mitochondrial protein-coding chr10-388 chr10 13350181 13350425 + 29.2 0.000 Intergenic Intergenic -2005 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr9-199 chr9 126804910 126805154 + 29.2 0.000 promoter-TSS (NM_001135776) promoter-TSS (NM_001135776) -8 NM_014007 23099 Hs.355581 NM_014007 ENSG00000169155 ZBTB43 ZBTB22B|ZNF-X|ZNF297B zinc finger and BTB domain containing 43 protein-coding chr6-28 chr6 63572402 63572646 + 29.2 0.000 5' UTR (NM_003463, exon 1 of 6) 5' UTR (NM_003463, exon 1 of 6) 512 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr19-516 chr19 39436017 39436261 + 29.2 0.000 promoter-TSS (NM_001363860) promoter-TSS (NM_001363860) -190 NM_001363860 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr20-227 chr20 20052610 20052854 + 29.2 0.000 promoter-TSS (NM_001278628) promoter-TSS (NM_001278628) 200 NM_015585 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr6-117 chr6 90369152 90369396 + 29.2 0.000 Intergenic Intergenic 56532 NR_039671 100616109 NR_039671 ENSG00000266760 MIR4464 mir-4464 microRNA 4464 ncRNA chr6-543 chr6 116447644 116447888 + 29.2 0.000 Intergenic Intergenic -13609 NM_001276460 441168 Hs.381220 NM_001010919 ENSG00000188820 CALHM6 C6orf187|FAM26F|INAM|dJ93H18.5 calcium homeostasis modulator family member 6 protein-coding chr5-186 chr5 173887971 173888215 + 29.2 0.000 promoter-TSS (NM_001308191) promoter-TSS (NM_001308191) -256 NM_001308189 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr12-268 chr12 31074384 31074628 + 29.2 0.000 promoter-TSS (NR_038927) promoter-TSS (NR_038927) 646 NM_004399 1663 Hs.443960 NM_004399 ENSG00000013573 DDX11 CHL1|CHLR1|KRG2|WABS DEAD/H-box helicase 11 protein-coding chr4-30 chr4 7939710 7939954 + 29.2 0.000 promoter-TSS (NM_001134647) promoter-TSS (NM_001134647) 29 NM_001371091 chr9-328 chr9 19184243 19184487 + 29.2 0.000 Intergenic Intergenic -46328 NM_001330640 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chr11-680 chr11 105609342 105609586 + 29.2 0.000 promoter-TSS (NM_000829) promoter-TSS (NM_000829) -609 NM_001077244 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding chr14-161 chr14 77376914 77377158 + 29.2 0.000 promoter-TSS (NM_213601) promoter-TSS (NM_213601) 58 NM_001346133 283578 Hs.26403 NM_213601 ENSG00000100580 TMED8 FAM15B transmembrane p24 trafficking protein family member 8 protein-coding chr22-261 chr22 26322570 26322814 + 29.2 0.000 intron (NM_001184776, intron 9 of 14) intron (NM_001184776, intron 9 of 14) -106568 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding chrX-244 chrX 39159050 39159294 + 29.2 0.000 Intergenic Intergenic 168190 NR_038968 286442 Hs.638478 NR_038968 ENSG00000235304 LINC01281 - long intergenic non-protein coding RNA 1281 ncRNA chr3-364 chr3 189355519 189355763 + 29.2 0.000 Intergenic Intergenic -115047 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr3-115 chr3 15206010 15206254 + 29.2 0.000 promoter-TSS (NM_014296) promoter-TSS (NM_014296) -114 NM_014296 23473 Hs.595234 NM_014296 ENSG00000131375 CAPN7 CALPAIN7|PALBH calpain 7 protein-coding chr14-200 chr14 100132675 100132919 + 29.2 0.000 intron (NM_001330221, intron 8 of 13) intron (NM_001330221, intron 8 of 13) 23142 NR_029888 442909 NR_029888 ENSG00000199082 MIR342 MIRN342|hsa-mir-342 microRNA 342 ncRNA chr11-363 chr11 66418199 66418443 + 29.2 0.000 Intergenic Intergenic -2683 NM_001318804 266743 Hs.256036 NM_178864 ENSG00000174576 NPAS4 Le-PAS|NXF|PASD10|bHLHe79 neuronal PAS domain protein 4 protein-coding chr2-232 chr2 197804405 197804649 + 29.2 0.000 promoter-TSS (NM_006226) promoter-TSS (NM_006226) -66 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr2-1190 chr2 9655557 9655801 + 29.2 0.000 Intergenic Intergenic -24682 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr2-194 chr2 169798725 169798969 + 29.2 0.000 promoter-TSS (NM_001294145) promoter-TSS (NM_001294145) -24 NM_003142 6741 Hs.632535 NM_003142 ENSG00000138385 SSB LARP3|La|La/SSB small RNA binding exonuclease protection factor La protein-coding chr6-355 chr6 73461771 73462015 + 29.2 0.000 exon (NM_012123, exon 1 of 12) exon (NM_012123, exon 1 of 12) 156 NM_012123 25821 Hs.347614 NM_012123 ENSG00000135297 MTO1 CGI-02|COXPD10 mitochondrial tRNA translation optimization 1 protein-coding chr4-382 chr4 152265202 152265446 + 29.2 0.000 Intergenic Intergenic -72331 NR_104273 102191832 Hs.712524 NR_104273 ENSG00000270751 FBXW7-AS1 DEAR|DEspR FBXW7 antisense RNA 1 ncRNA chr7-310 chr7 2525673 2525917 + 29.2 0.000 intron (NM_001040168, intron 5 of 7) intron (NM_001040168, intron 5 of 7) -1279 NR_039791 100616116 NR_039791 ENSG00000264357 MIR4648 - microRNA 4648 ncRNA chr12-211 chr12 54411574 54411818 + 29.2 0.000 intron (NR_120486, intron 3 of 3) intron (NR_120486, intron 3 of 3) 7570 NM_002205 3678 Hs.505654 NM_002205 ENSG00000161638 ITGA5 CD49e|FNRA|VLA-5|VLA5A integrin subunit alpha 5 protein-coding chr5-138 chr5 172869309 172869553 + 29.2 0.000 intron (NM_001031711, intron 1 of 9) intron (NM_001031711, intron 1 of 9) 35180 NM_001031711 57222 Hs.509163 NM_020462 ENSG00000113719 ERGIC1 AMCN|ERGIC-32|ERGIC32|NET24 endoplasmic reticulum-golgi intermediate compartment 1 protein-coding chr13-90 chr13 42271655 42271899 + 29.2 0.000 promoter-TSS (NM_016248) promoter-TSS (NM_016248) -375 NM_016248 11215 Hs.105105 NM_016248 ENSG00000023516 AKAP11 AKAP-11|AKAP220|PPP1R44|PRKA11 A-kinase anchoring protein 11 protein-coding chr17-587 chr17 7583570 7583814 + 29.2 0.000 promoter-TSS (NR_136403) promoter-TSS (NR_136403) 45 NM_001330073 9526 Hs.246381 NM_004870 ENSG00000129255 MPDU1 CDGIF|HBEBP2BPA|Lec35|My008|PP3958|PQLC5|SL15|SLC66A5 mannose-P-dolichol utilization defect 1 protein-coding chr12-679 chr12 98475408 98475652 + 29.2 0.000 Intergenic Intergenic -18385 NR_033801 121456 Hs.620643 NR_033801 ENSG00000227825 SLC9A7P1 - solute carrier family 9 member 7 pseudogene 1 pseudo chr16-290 chr16 657857 658101 + 29.2 0.000 intron (NM_145294, intron 21 of 40) intron (NM_145294, intron 21 of 40) 8614 NM_145294 197335 Hs.511903 NM_145294 ENSG00000161996 WDR90 C16orf15|C16orf16|C16orf17|C16orf18|C16orf19 WD repeat domain 90 protein-coding chr3-300 chr3 9769646 9769890 + 29.2 0.000 intron (NM_003656, intron 1 of 11) intron (NM_003656, intron 1 of 11) 179 NM_003656 8536 Hs.434875 NM_003656 ENSG00000134072 CAMK1 CAMKI calcium/calmodulin dependent protein kinase I protein-coding chr12-320 chr12 27710734 27710978 + 29.2 0.000 promoter-TSS (NM_001190864) promoter-TSS (NM_001190864) 24 NM_021821 60488 Hs.714076 NM_021821 ENSG00000061794 MRPS35 HDCMD11P|MDS023|MRP-S28|MRPS28 mitochondrial ribosomal protein S35 protein-coding chr3-151 chr3 120349267 120349511 + 29.2 0.000 promoter-TSS (NM_001099678) promoter-TSS (NM_001099678) -35 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding chr5-93 chr5 6713025 6713269 + 29.2 0.000 promoter-TSS (NM_006999) promoter-TSS (NM_006999) -285 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr5-348 chr5 138440282 138440526 + 29.0 0.000 intron (NM_016606, intron 1 of 7) intron (NM_016606, intron 1 of 7) 1347 NR_073448 51308 Hs.416090 NM_016606 ENSG00000132563 REEP2 C5orf19|SGC32445|SPG72|Yip2d receptor accessory protein 2 protein-coding chr8-771 chr8 107703537 107703781 + 29.0 0.000 Intergenic Intergenic -205741 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr5-416 chr5 76959216 76959460 + 29.0 0.000 intron (NM_001882, intron 5 of 6) intron (NM_001882, intron 5 of 6) 6293 NM_001882 1393 Hs.115617 NM_001882 ENSG00000145708 CRHBP CRF-BP|CRFBP corticotropin releasing hormone binding protein protein-coding chr13-84 chr13 25047160 25047404 + 29.0 0.000 Intergenic CpG -48856 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr1-834 chr1 44358878 44359122 + 29.0 0.000 Intergenic MIRb|SINE|MIR -3721 NM_001301700 79033 Hs.731413 NM_024066 ENSG00000117419 ERI3 PINT1|PRNPIP ERI1 exoribonuclease family member 3 protein-coding chr14-172 chr14 64338776 64339020 + 29.0 0.000 promoter-TSS (NM_001291712) promoter-TSS (NM_001291712) -285 NM_001291712 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr8-272 chr8 121942505 121942749 + 29.0 0.000 Intergenic Intergenic -301187 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr12-363 chr12 28710960 28711204 + 29.0 0.000 Intergenic Intergenic -438196 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding chr5-448 chr5 15834961 15835205 + 29.0 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -100099 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr3-382 chr3 187702709 187702953 + 29.0 0.000 promoter-TSS (NM_001004312) promoter-TSS (NM_001004312) -274 NM_001004312 344892 Hs.567872 NM_001004312 ENSG00000198471 RTP2 Z3CXXC2 receptor transporter protein 2 protein-coding chr11-240 chr11 65524538 65524782 + 29.0 0.000 promoter-TSS (NM_001048218) promoter-TSS (NM_001048218) -423 NM_001048218 57410 Hs.238839 NM_020680 ENSG00000142186 SCYL1 GKLP|HT019|NKTL|NTKL|P105|SCAR21|TAPK|TEIF|TRAP SCY1 like pseudokinase 1 protein-coding chr17-295 chr17 77437061 77437305 + 29.0 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -13566 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr10-408 chr10 63700229 63700473 + 29.0 0.000 Intergenic Intergenic -178461 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr16-312 chr16 51431549 51431793 + 29.0 0.000 Intergenic Intergenic -280399 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr4-325 chr4 76090302 76090546 + 29.0 0.000 intron (NM_001130017, intron 3 of 9) intron (NM_001130017, intron 3 of 9) 15729 NM_001179 419 Hs.24976 NM_001179 ENSG00000156219 ART3 ARTC3 ADP-ribosyltransferase 3 protein-coding chr2-630 chr2 158892999 158893243 + 29.0 0.000 Intergenic Intergenic -75513 NM_001145909 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr6-260 chr6 130500719 130500963 + 29.0 0.000 Intergenic L3|LINE|CR1 63724 NM_052913 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding chr12-475 chr12 69331250 69331494 + 29.0 0.000 Intergenic HERVK22-int|LTR|ERVK -16982 NM_000239 4069 Hs.524579 NM_000239 ENSG00000090382 LYZ LYZF1|LZM lysozyme protein-coding chr1-527 chr1 2212548 2212792 + 29.0 0.000 promoter-TSS (NM_001282670) promoter-TSS (NM_001282670) 50 NM_001282670 199990 Hs.107101 NM_182533 ENSG00000162585 FAAP20 C1orf86|FP7162 FA core complex associated protein 20 protein-coding chr19-475 chr19 57746714 57746958 + 29.0 0.000 promoter-TSS (NR_145327) promoter-TSS (NR_145327) 21 NR_145326 284309 Hs.720254 NM_173632 ENSG00000152443 ZNF776 - zinc finger protein 776 protein-coding chr2-518 chr2 189018713 189018957 + 29.0 0.000 Intergenic Intergenic 23205 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA chr9-594 chr9 38065678 38065922 + 29.0 0.000 intron (NM_003028, intron 1 of 5) intron (NM_003028, intron 1 of 5) 3427 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr18-129 chr18 57533671 57533915 + 29.0 0.000 Intergenic Intergenic 52909 NM_001371094 chr7-483 chr7 122038972 122039216 + 29.0 0.000 intron (NM_001206839, intron 18 of 28) intron (NM_001206839, intron 18 of 28) 105155 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr1-561 chr1 181255604 181255848 + 29.0 0.000 Intergenic LTR33|LTR|ERVL 19338 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA chr2-326 chr2 207166033 207166277 + 29.0 0.000 promoter-TSS (NM_003709) promoter-TSS (NM_003709) 31 NR_073108 8609 Hs.59908 NM_003709 ENSG00000118263 KLF7 UKLF Kruppel like factor 7 protein-coding chr16-238 chr16 2205181 2205425 + 29.0 0.000 promoter-TSS (NM_001199173) promoter-TSS (NM_001199173) -151 NM_001352057 64223 Hs.29203 NM_022372 ENSG00000167965 MLST8 GBL|GbetaL|LST8|POP3|WAT1 MTOR associated protein, LST8 homolog protein-coding chr3-259 chr3 184017830 184018074 + 29.0 0.000 promoter-TSS (NM_005688) promoter-TSS (NM_005688) -68 NM_001023587 10057 Hs.368563 NM_005688 ENSG00000114770 ABCC5 ABC33|EST277145|MOAT-C|MOATC|MRP5|SMRP|pABC11 ATP binding cassette subfamily C member 5 protein-coding chr7-267 chr7 47757893 47758137 + 29.0 0.000 Intergenic Intergenic -3461 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA chr9-182 chr9 94259172 94259416 + 29.0 0.000 promoter-TSS (NM_001301275) promoter-TSS (NM_001301275) -4 NM_001301275 169841 Hs.387623 NM_003448 ENSG00000175787 ZNF169 - zinc finger protein 169 protein-coding chr5-543 chr5 133148870 133149114 + 29.0 0.000 Intergenic MIRb|SINE|MIR 96979 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr5-371 chr5 59127672 59127916 + 29.0 0.000 intron (NM_001364603, intron 5 of 15) intron (NM_001364603, intron 5 of 15) -88318 NM_001197221 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr12-148 chr12 120469475 120469719 + 29.0 0.000 promoter-TSS (NM_001037494) promoter-TSS (NM_001037494) 151 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr20-119 chr20 36862079 36862323 + 29.0 0.000 intron (NM_080627, intron 1 of 14) intron (NM_080627, intron 1 of 14) 1337 NM_080627 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr11-258 chr11 57205063 57205307 + 29.0 0.000 Intergenic Intergenic 23232 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding chr5-234 chr5 95961715 95961959 + 29.0 0.000 promoter-TSS (NM_012081) promoter-TSS (NM_012081) 14 NM_012081 22936 Hs.192221 NM_012081 ENSG00000118985 ELL2 MRCCAT1 elongation factor for RNA polymerase II 2 protein-coding chr8-313 chr8 132921289 132921533 + 29.0 0.000 intron (NM_003235, intron 21 of 47) MamRTE1|LINE|RTE-BovB 54453 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr11-513 chr11 66119778 66120022 + 29.0 0.000 intron (NM_018026, intron 1 of 23) MIR3|SINE|MIR 49628 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr16-317 chr16 67277348 67277592 + 29.0 0.000 promoter-TSS (NM_001129727) promoter-TSS (NM_001129727) -692 NM_001129727 25894 Hs.188781 NM_015432 ENSG00000196155 PLEKHG4 ARHGEF44|PRTPHN1|SCA4 pleckstrin homology and RhoGEF domain containing G4 protein-coding chr12-1054 chr12 13220911 13221155 + 29.0 0.000 Intergenic Intergenic 24307 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr12-455 chr12 124500605 124500849 + 29.0 0.000 intron (NM_001077261, intron 2 of 47) intron (NM_001077261, intron 2 of 47) 66885 NM_001206654 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr10-919 chr10 114505368 114505612 + 29.0 0.000 intron (NM_001352440, intron 6 of 20) intron (NM_001352440, intron 6 of 20) 21423 NM_001322889 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding chr1-329 chr1 27322029 27322273 + 28.9 0.000 promoter-TSS (NR_037576) promoter-TSS (NR_037576) 6 NM_032125 84065 Hs.469171 NM_032125 ENSG00000186501 TMEM222 C1orf160 transmembrane protein 222 protein-coding chr4-137 chr4 168758399 168758643 + 28.9 0.000 intron (NM_001166108, intron 10 of 21) intron (NM_001166108, intron 10 of 21) -73574 NM_001367570 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr7-83 chr7 155166746 155166990 + 28.9 0.000 Intergenic (GCTGA)n|Simple_repeat|Simple_repeat -95311 NR_038945 100128264 Hs.248137 NR_038945 ENSG00000220575 HTR5A-AS1 HTR5AOS HTR5A antisense RNA 1 ncRNA chr14-158 chr14 68962549 68962793 + 28.9 0.000 intron (NM_001102, intron 1 of 20) L3|LINE|CR1 16631 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr7-380 chr7 42932873 42933117 + 28.9 0.000 promoter-TSS (NM_002787) promoter-TSS (NM_002787) 619 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding chr8-199 chr8 104643256 104643500 + 28.9 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -54354 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr4-138 chr4 182354947 182355191 + 28.9 0.000 intron (NM_001080477, intron 3 of 27) L2c|LINE|L2 111667 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr10-270 chr10 103273053 103273297 + 28.9 0.000 Intergenic Intergenic -3963 NM_032727 9118 Hs.500916 NM_032727 ENSG00000148798 INA NEF5|NF-66|TXBP-1 internexin neuronal intermediate filament protein alpha protein-coding chr13-118 chr13 79481151 79481395 + 28.9 0.000 promoter-TSS (NR_046685) promoter-TSS (NR_046685) -42 NR_046685 100874208 Hs.602801 NR_046685 ENSG00000232132 NDFIP2-AS1 - NDFIP2 antisense RNA 1 ncRNA chr14-130 chr14 104933222 104933466 + 28.9 0.000 3' UTR (NM_001308174, exon 11 of 11) 3' UTR (NM_001308174, exon 11 of 11) 8465 NM_001308174 122618 Hs.407101 NM_138790 ENSG00000166428 PLD4 C14orf175 phospholipase D family member 4 protein-coding chr2-243 chr2 44291677 44291921 + 28.9 0.000 intron (NM_000341, intron 4 of 9) intron (NM_000341, intron 4 of 9) 16319 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding chr5-171 chr5 151758617 151758861 + 28.9 0.000 promoter-TSS (NM_004045) promoter-TSS (NM_004045) -108 NM_004045 475 Hs.125213 NM_004045 ENSG00000177556 ATOX1 ATX1|HAH1 antioxidant 1 copper chaperone protein-coding chr1-734 chr1 225447893 225448137 + 28.9 0.000 Intergenic Intergenic -19160 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr8-448 chr8 65973900 65974144 + 28.9 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -40956 NM_001349432 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr11-142 chr11 126211623 126211867 + 28.9 0.000 promoter-TSS (NM_001363516) promoter-TSS (NM_001363516) 21 NM_001330446 79607 Hs.276315 NM_024556 ENSG00000197798 FAM118B - family with sequence similarity 118 member B protein-coding chr16-309 chr16 31202699 31202943 + 28.9 0.000 promoter-TSS (NM_145182) promoter-TSS (NM_145182) -45 NM_145182 29108 Hs.499094 NM_013258 ENSG00000103490 PYCARD ASC|CARD5|TMS|TMS-1|TMS1 PYD and CARD domain containing protein-coding chr19-699 chr19 41352572 41352816 + 28.9 0.000 exon (NM_000660, exon 1 of 7) exon (NM_000660, exon 1 of 7) 1228 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|IBDIMDE|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr2-186 chr2 86441177 86441421 + 28.9 0.000 promoter-TSS (NM_001146688) promoter-TSS (NM_001146688) -72 NM_018433 55818 Hs.557425 NM_018433 ENSG00000115548 KDM3A JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA lysine demethylase 3A protein-coding chr6-267 chr6 150882154 150882398 + 28.9 0.000 intron (NM_001350486, intron 4 of 27) intron (NM_001350486, intron 4 of 27) 15790 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr6-788 chr6 34284813 34285057 + 28.9 0.000 3' UTR (NM_006703, exon 5 of 5) 3' UTR (NM_006703, exon 5 of 5) -35827 NM_178508 221491 Hs.381300 NM_178508 ENSG00000186577 SMIM29 C6orf1|LBH small integral membrane protein 29 protein-coding chr2-845 chr2 68357904 68358148 + 28.9 0.000 Intergenic MER91A|DNA|hAT-Tip100 -7256 NM_002664 5341 Hs.468840 NM_002664 ENSG00000115956 PLEK P47 pleckstrin protein-coding chr2-605 chr2 47056535 47056779 + 28.9 0.000 intron (NM_001288951, intron 19 of 20) intron (NM_001288951, intron 19 of 20) 98651 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr7-341 chr7 5425892 5426136 + 28.9 0.000 TTS (NM_001354886) TTS (NM_001354886) -2468 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr6-358 chr6 87702142 87702386 + 28.9 0.000 promoter-TSS (NM_018064) promoter-TSS (NM_018064) -31 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr1-496 chr1 108876882 108877126 + 28.9 0.000 promoter-TSS (NM_001321038) promoter-TSS (NM_001321038) 19 NM_001321038 29899 Hs.584901 NM_013296 ENSG00000121957 GPSM2 CMCS|DFNB82|LGN|PINS G protein signaling modulator 2 protein-coding chr3-282 chr3 116445219 116445463 + 28.9 0.000 5' UTR (NM_002338, exon 1 of 7) 5' UTR (NM_002338, exon 1 of 7) 146 NM_001318915 4045 Hs.26409 NM_002338 ENSG00000185565 LSAMP IGLON3|LAMP limbic system associated membrane protein protein-coding chr6-370 chr6 3520993 3521237 + 28.9 0.000 Intergenic Intergenic -64556 NM_015482 63027 Hs.713588 NM_015482 ENSG00000137266 SLC22A23 C6orf85 solute carrier family 22 member 23 protein-coding chr1-500 chr1 148151984 148152228 + 28.9 0.000 non-coding (NR_110864, exon 1 of 23) non-coding (NR_110864, exon 1 of 23) 175 NR_110864 200030 Hs.721588 NM_183372 ENSG00000263956 NBPF11 NBPF24 NBPF member 11 protein-coding chr12-227 chr12 76863395 76863639 + 28.9 0.000 intron (NM_001321, intron 2 of 5) intron (NM_001321, intron 2 of 5) 15502 NM_001321 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr1-479 chr1 35718696 35718940 + 28.9 0.000 promoter-TSS (NM_152374) promoter-TSS (NM_152374) 66 NM_152374 127703 Hs.112023 NM_152374 ENSG00000142686 C1orf216 - chromosome 1 open reading frame 216 protein-coding chr22-409 chr22 45064546 45064790 + 28.9 0.000 Intergenic Intergenic -54663 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr12-264 chr12 12819912 12820156 + 28.9 0.000 intron (NM_201224, intron 2 of 10) intron (NM_201224, intron 2 of 10) 6688 NM_201224 51202 Hs.719938 NM_016355 ENSG00000213782 DDX47 E4-DBP|HQ0256|MSTP162|RRP3 DEAD-box helicase 47 protein-coding chr19-491 chr19 12881335 12881579 + 28.9 0.000 promoter-TSS (NM_001375) promoter-TSS (NM_001375) -8 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr8-256 chr8 25479226 25479470 + 28.9 0.000 intron (NM_001317906, intron 6 of 13) L2a|LINE|L2 20115 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding chr2-265 chr2 27086336 27086580 + 28.9 0.000 promoter-TSS (NM_006488) promoter-TSS (NM_006488) -314 NM_006488 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chr16-186 chr16 85612723 85612967 + 28.9 0.000 promoter-TSS (NM_014615) promoter-TSS (NM_014615) -477 NM_014615 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr4-148 chr4 139301277 139301521 + 28.9 0.000 promoter-TSS (NM_001184986) promoter-TSS (NM_001184986) -106 NM_057175 80155 Hs.745047 NM_057175 ENSG00000164134 NAA15 Ga19|MRD50|NARG1|NAT1P|NATH|TBDN|TBDN100 N(alpha)-acetyltransferase 15, NatA auxiliary subunit protein-coding chr22-184 chr22 43897821 43898065 + 28.9 0.000 Intergenic Intergenic -5930 NM_138814 150379 Hs.248086 NM_138814 ENSG00000100341 PNPLA5 GS2L|dJ388M5|dJ388M5.4 patatin like phospholipase domain containing 5 protein-coding chr19-551 chr19 17235539 17235783 + 28.7 0.000 exon (NM_005234, exon 3 of 4) exon (NM_005234, exon 3 of 4) 9435 NM_024578 79629 Hs.422676 NM_024578 ENSG00000099330 OCEL1 FWP009|S863-9 occludin/ELL domain containing 1 protein-coding chr4-378 chr4 122783445 122783689 + 28.7 0.000 Intergenic Intergenic -43141 NM_002006 2247 Hs.284244 NM_002006 ENSG00000138685 FGF2 BFGF|FGF-2|FGFB|HBGF-2 fibroblast growth factor 2 protein-coding chr10-216 chr10 50740384 50740628 + 28.7 0.000 intron (NM_001079516, intron 1 of 5) intron (NM_001079516, intron 1 of 5) 570 NM_001321957 653308 Hs.659820 NM_001079516 ENSG00000204147 ASAH2B ASAH2C|ASAH2L|bA449O16.3|bA98I6.3 N-acylsphingosine amidohydrolase 2B protein-coding chr3-710 chr3 40120883 40121127 + 28.7 0.000 intron (NM_001284426, intron 1 of 14) intron (NM_001284426, intron 1 of 14) 20994 NM_001284426 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr3-992 chr3 107404814 107405058 + 28.7 0.000 Intergenic Intergenic -22777 NR_126332 101929579 Hs.552750 NR_126332 LOC101929579 - uncharacterized LOC101929579 ncRNA chr5-588 chr5 72556654 72556898 + 28.7 0.000 promoter-TSS (NR_105008) promoter-TSS (NR_105008) -301 NR_105008 102503427 Hs.429280 NR_105008 LOC102503427 - uncharacterized LOC102503427 ncRNA chr15-114 chr15 48428057 48428301 + 28.7 0.000 intron (NM_000138, intron 57 of 65) intron (NM_000138, intron 57 of 65) 95982 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr8-110 chr8 93917479 93917723 + 28.7 0.000 intron (NM_001161781, intron 1 of 1) CpG 654 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr5-129 chr5 55535049 55535293 + 28.7 0.000 promoter-TSS (NM_003711) promoter-TSS (NM_003711) -93 NM_176895 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding chr4-769 chr4 170109958 170110202 + 28.7 0.000 Intergenic Intergenic -19693 NM_001286683 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chr3-477 chr3 50611997 50612241 + 28.7 0.000 promoter-TSS (NM_145071) promoter-TSS (NM_145071) 257 NM_001243926 7867 Hs.234521 NM_004635 ENSG00000114738 MAPKAPK3 3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3 MAPK activated protein kinase 3 protein-coding chr8-214 chr8 124474688 124474932 + 28.7 0.000 promoter-TSS (NM_007218) promoter-TSS (NM_007218) 43 NM_007218 11236 Hs.744151 NM_007218 ENSG00000170881 RNF139 HRCA1|RCA1|TRC8 ring finger protein 139 protein-coding chr16-236 chr16 720722 720966 + 28.7 0.000 promoter-TSS (NM_001271285) promoter-TSS (NM_001271285) -302 NM_001271285 65990 Hs.166244 NM_023933 ENSG00000103254 FAM173A C16orf24 family with sequence similarity 173 member A protein-coding chr14-266 chr14 65000961 65001205 + 28.7 0.000 intron (NM_002028, intron 1 of 11) LTR23|LTR|ERV1 14188 NM_002028 2342 Hs.325531 NM_002028 ENSG00000257365 FNTB FPTB farnesyltransferase, CAAX box, beta protein-coding chr1-550 chr1 91885986 91886230 + 28.7 0.000 promoter-TSS (NM_003243) promoter-TSS (NM_003243) 43 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr10-354 chr10 3942651 3942895 + 28.7 0.000 Intergenic Intergenic -48387 NR_106726 102464829 NR_106726 ENSG00000274809 MIR6078 hsa-mir-6078 microRNA 6078 ncRNA chr11-873 chr11 33557332 33557576 + 28.7 0.000 intron (NM_012194, intron 6 of 20) intron (NM_012194, intron 6 of 20) 143286 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr4-200 chr4 8176925 8177169 + 28.7 0.000 Intergenic Intergenic -18234 NM_001130086 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr5-407 chr5 179023652 179023896 + 28.7 0.000 promoter-TSS (NM_001136116) promoter-TSS (NM_001136116) -30 NM_001136116 345462 Hs.445740 NM_001136116 ENSG00000234284 ZNF879 DKFZp686E2433 zinc finger protein 879 protein-coding chr17-790 chr17 56915814 56916058 + 28.7 0.000 Intergenic Intergenic -1887 NM_005082 7706 Hs.528952 NM_005082 ENSG00000121060 TRIM25 EFP|RNF147|Z147|ZNF147 tripartite motif containing 25 protein-coding chr7-556 chr7 28041526 28041770 + 28.7 0.000 intron (NM_175061, intron 1 of 4) intron (NM_175061, intron 1 of 4) -138809 NR_034097 100128081 Hs.434307 NR_034097 JAZF1-AS1 - JAZF1 antisense RNA 1 ncRNA chr22-442 chr22 35219102 35219346 + 28.7 0.000 intron (NR_126356, intron 1 of 5) MLT1L|LTR|ERVL-MaLR 11832 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr17-632 chr17 50619659 50619903 + 28.7 0.000 exon (NM_018896, exon 34 of 38) exon (NM_018896, exon 34 of 38) -15100 NM_001144070 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr19-286 chr19 32675246 32675490 + 28.7 0.000 promoter-TSS (NM_032139) promoter-TSS (NM_032139) -188 NM_032139 84079 Hs.59236 NM_032139 ENSG00000105186 ANKRD27 PP12899|VARP ankyrin repeat domain 27 protein-coding chr18-186 chr18 63161883 63162127 + 28.7 0.000 intron (NM_000633, intron 2 of 2) intron (NM_000633, intron 2 of 2) 157375 NM_000633 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding chr1-1105 chr1 216531293 216531537 + 28.7 0.000 intron (NM_001243518, intron 6 of 7) intron (NM_001243518, intron 6 of 7) -107967 NM_206933 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding chr8-75 chr8 43056198 43056442 + 28.7 0.000 promoter-TSS (NM_002027) promoter-TSS (NM_002027) -3 NM_002027 2339 Hs.370312 NM_002027 ENSG00000168522 FNTA FPTA|PGGT1A|PTAR2 farnesyltransferase, CAAX box, alpha protein-coding chr4-369 chr4 33262962 33263206 + 28.7 0.000 Intergenic Intergenic 776809 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr7-320 chr7 47494550 47494794 + 28.7 0.000 intron (NM_022748, intron 3 of 30) intron (NM_022748, intron 3 of 30) -29869 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr11-236 chr11 62621888 62622132 + 28.7 0.000 promoter-TSS (NM_001288721) promoter-TSS (NM_001288721) -24 NM_012200 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr12-190 chr12 20368157 20368401 + 28.7 0.000 promoter-TSS (NM_000921) promoter-TSS (NM_000921) -966 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr14-464 chr14 20455128 20455372 + 28.7 0.000 promoter-TSS (NM_080648) promoter-TSS (NM_080648) 24 NM_001641 328 Hs.73722 NM_001641 ENSG00000100823 APEX1 APE|APE1|APEN|APEX|APX|HAP1|REF1 apurinic/apyrimidinic endodeoxyribonuclease 1 protein-coding chr7-306 chr7 519008 519252 + 28.7 0.000 5' UTR (NM_033023, exon 1 of 6) 5' UTR (NM_033023, exon 1 of 6) 714 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr20-154 chr20 543776 544020 + 28.7 0.000 promoter-TSS (NM_001895) promoter-TSS (NM_001895) -108 NM_001895 1457 Hs.644056 NM_001895 ENSG00000101266 CSNK2A1 CK2A1|CKII|Cka1|Cka2|OCNDS casein kinase 2 alpha 1 protein-coding chr1-126 chr1 147599786 147600030 + 28.7 0.000 intron (NM_004326, intron 1 of 9) CpG 58407 NM_004326 607 Hs.415209 NM_004326 ENSG00000116128 BCL9 LGS BCL9 transcription coactivator protein-coding chr11-195 chr11 69420629 69420873 + 28.7 0.000 Intergenic Intergenic -4904 NM_001319657 102724265 Hs.448669 NM_001319657 LOC102724265 - uncharacterized LOC102724265 protein-coding chr11-732 chr11 64566600 64566844 + 28.7 0.000 intron (NM_001307985, intron 6 of 7) intron (NM_001307985, intron 6 of 7) 10781 NM_018484 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chrX-410 chrX 3728526 3728770 + 28.7 0.000 Intergenic Intergenic -14999 NM_005044 5613 Hs.390788 NM_005044 ENSG00000183943 PRKX PKX1 protein kinase X-linked protein-coding chr5-532 chr5 58182524 58182768 + 28.7 0.000 Intergenic Intergenic -60305 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr6-1128 chr6 167855817 167856061 + 28.7 0.000 intron (NM_001291964, intron 1 of 32) MER44B|DNA|TcMar-Tigger 28304 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding chr1-319 chr1 157138463 157138707 + 28.7 0.000 promoter-TSS (NM_001145312) promoter-TSS (NM_001145312) 6 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr2-1355 chr2 196823744 196823988 + 28.7 0.000 Intergenic MIRb|SINE|MIR -13590 NM_213608 401027 Hs.245666 NM_213608 ENSG00000187944 C2orf66 IIDS6411|UNQ6411 chromosome 2 open reading frame 66 protein-coding chr1-274 chr1 116570854 116571098 + 28.7 0.000 promoter-TSS (NR_026665) promoter-TSS (NR_026665) 50 NM_001779 965 Hs.34341 NM_001779 ENSG00000116815 CD58 LFA-3|LFA3|ag3 CD58 molecule protein-coding chr1-468 chr1 21909852 21910096 + 28.7 0.000 intron (NM_005529, intron 1 of 96) intron (NM_005529, intron 1 of 96) 27336 NM_005529 3339 Hs.562227 NM_005529 ENSG00000142798 HSPG2 HSPG|PLC|PRCAN|SJA|SJS|SJS1 heparan sulfate proteoglycan 2 protein-coding chr6-533 chr6 74087938 74088182 + 28.7 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 18609 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr19-255 chr19 51339719 51339963 + 28.7 0.000 intron (NM_001163922, intron 4 of 9) CpG 2283 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr10-228 chr10 98134573 98134817 + 28.7 0.000 promoter-TSS (NM_001351011) promoter-TSS (NM_001351011) 38 NM_014472 27291 Hs.419800 NM_014472 ENSG00000166024 R3HCC1L C10orf28|GIDRP86|GIDRP88|PSORT R3H domain and coiled-coil containing 1 like protein-coding chr12-214 chr12 124369551 124369795 + 28.7 0.000 intron (NM_001077261, intron 21 of 47) intron (NM_001077261, intron 21 of 47) -32431 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr14-156 chr14 60724098 60724342 + 28.7 0.000 5' UTR (NM_017420, exon 1 of 3) 5' UTR (NM_017420, exon 1 of 3) 131 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding chr10-697 chr10 127041553 127041797 + 28.6 0.000 intron (NM_001290223, intron 19 of 51) L1MB7|LINE|L1 136266 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr17-891 chr17 78651625 78651869 + 28.6 0.000 Intergenic L1ME3G|LINE|L1 -19690 NR_110849 101928710 Hs.464224 NR_110848 ENSG00000267123 SCAT1 LINC02081|XLOC_012582 S-phase cancer associated transcript 1 ncRNA chr1-413 chr1 41448712 41448956 + 28.6 0.000 Intergenic L2b|LINE|L2 35849 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr17-279 chr17 21099757 21100001 + 28.6 0.000 Intergenic Intergenic 24323 NR_110895 101060544 Hs.585812 NR_110895 ENSG00000236819 LINC01563 HP08942 long intergenic non-protein coding RNA 1563 ncRNA chr15-365 chr15 48433633 48433877 + 28.6 0.000 intron (NM_000138, intron 54 of 65) intron (NM_000138, intron 54 of 65) 101558 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr7-568 chr7 50418084 50418328 + 28.6 0.000 Intergenic Intergenic 32144 NM_001346564 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr14-655 chr14 89206574 89206818 + 28.6 0.000 intron (NM_001085471, intron 4 of 6) intron (NM_001085471, intron 4 of 6) 210537 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr2-547 chr2 28102453 28102697 + 28.6 0.000 intron (NM_199193, intron 7 of 13) intron (NM_199193, intron 7 of 13) 104386 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr2-1912 chr2 210707821 210708065 + 28.6 0.000 Intergenic MIRb|SINE|MIR 90372 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA chr20-147 chr20 49724925 49725169 + 28.6 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -11169 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr9-374 chr9 130129464 130129708 + 28.6 0.000 3' UTR (NM_001287346, exon 17 of 17) 3' UTR (NM_001287346, exon 17 of 17) 14633 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr3-257 chr3 156674245 156674489 + 28.6 0.000 promoter-TSS (NM_001184717) promoter-TSS (NM_001184717) -223 NM_015508 25976 Hs.744050 NM_015508 ENSG00000163659 TIPARP ARTD14|PARP7|pART14 TCDD inducible poly(ADP-ribose) polymerase protein-coding chr6-76 chr6 34244602 34244846 + 28.6 0.000 intron (NM_002131, intron 5 of 5) intron (NM_002131, intron 5 of 5) 4051 NR_106893 102465502 NR_106893 ENSG00000276404 MIR6835 hsa-mir-6835 microRNA 6835 ncRNA chr2-203 chr2 54455908 54456152 + 28.6 0.000 promoter-TSS (NM_003128) promoter-TSS (NM_003128) -297 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr20-247 chr20 3204436 3204680 + 28.6 0.000 exon (NM_023935, exon 1 of 9) exon (NM_023935, exon 1 of 9) 124 NM_023935 65992 Hs.471975 NM_023935 ENSG00000198171 DDRGK1 C20orf116|SEMDSH|UFBP1|dJ1187M17.3 DDRGK domain containing 1 protein-coding chr9-692 chr9 124320307 124320551 + 28.6 0.000 intron (NM_001166169, intron 4 of 9) intron (NM_001166169, intron 4 of 9) 28009 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr14-102 chr14 44897066 44897310 + 28.6 0.000 promoter-TSS (NM_001017923) promoter-TSS (NM_001017923) -87 NM_001017923 122525 Hs.82098 NM_001017923 ENSG00000179476 C14orf28 DRIP-1|DRIP1|c14_5270 chromosome 14 open reading frame 28 protein-coding chr3-323 chr3 11770513 11770757 + 28.6 0.000 Intergenic Intergenic -50096 NM_014667 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr4-481 chr4 182554754 182554998 + 28.6 0.000 intron (NM_001080477, intron 3 of 27) intron (NM_001080477, intron 3 of 27) 311474 NM_001080477 55714 Hs.130438 NM_001080477 ENSG00000218336 TENM3 MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3 teneurin transmembrane protein 3 protein-coding chr12-93 chr12 100267092 100267336 + 28.6 0.000 promoter-TSS (NR_135073) promoter-TSS (NR_135073) 37 NM_017988 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr6-335 chr6 158663020 158663264 + 28.6 0.000 promoter-TSS (NM_001318745) promoter-TSS (NM_001318745) -261 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr17-251 chr17 76384491 76384735 + 28.6 0.000 promoter-TSS (NM_021972) promoter-TSS (NM_021972) 4 NM_001142601 8877 Hs.68061 NM_021972 ENSG00000176170 SPHK1 SPHK sphingosine kinase 1 protein-coding chr11-557 chr11 12433919 12434163 + 28.6 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 56470 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chr17-520 chr17 78324491 78324735 + 28.6 0.000 Intergenic Intergenic 35466 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding chr1-823 chr1 28601730 28601974 + 28.6 0.000 TTS (NM_001135218) TTS (NM_001135218) 9357 NM_001193532 115273 Hs.652321 NM_152304 ENSG00000188060 RAB42 - RAB42, member RAS oncogene family protein-coding chr7-229 chr7 97872245 97872489 + 28.6 0.000 promoter-TSS (NM_001178077) promoter-TSS (NM_001178077) 41 NM_001178076 440 Hs.489207 NM_001673 ENSG00000070669 ASNS ASNSD|TS11 asparagine synthetase (glutamine-hydrolyzing) protein-coding chr19-603 chr19 46890745 46890989 + 28.6 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 29870 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr4-464 chr4 84632094 84632338 + 28.6 0.000 intron (NM_001263, intron 6 of 12) intron (NM_001263, intron 6 of 12) 49089 NM_001263 1040 Hs.654899 NM_001263 ENSG00000163624 CDS1 CDS 1 CDP-diacylglycerol synthase 1 protein-coding chr9-60 chr9 35111591 35111835 + 28.6 0.000 promoter-TSS (NM_001317991) promoter-TSS (NM_001317991) -261 NM_001317991 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr15-343 chr15 92801712 92801956 + 28.6 0.000 Intergenic L2c|LINE|L2 6350 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr11-835 chr11 129364126 129364370 + 28.6 0.000 Intergenic CpG -11600 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding chr12-305 chr12 99984967 99985211 + 28.6 0.000 promoter-TSS (NM_001352185) promoter-TSS (NM_001352185) -435 NM_001352187 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-606 chr1 159925372 159925616 + 28.6 0.000 promoter-TSS (NM_003564) promoter-TSS (NM_003564) 13 NM_003564 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr1-831 chr1 39846131 39846375 + 28.6 0.000 intron (NR_132413, intron 1 of 3) intron (NR_132413, intron 1 of 3) 37251 NM_017646 54802 Hs.356554 NM_017646 ENSG00000043514 TRIT1 COXPD35|GRO1|IPPT|IPT|IPTase|MOD5|hGRO1 tRNA isopentenyltransferase 1 protein-coding chr3-430 chr3 190076978 190077222 + 28.6 0.000 intron (NM_001134418, intron 1 of 14) intron (NM_001134418, intron 1 of 14) 43797 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr2-951 chr2 71458639 71458883 + 28.6 0.000 intron (NM_003494, intron 1 of 54) MIRb|SINE|MIR 5200 NM_001130980 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr15-42 chr15 69160390 69160634 + 28.6 0.000 promoter-TSS (NM_015554) promoter-TSS (NM_015554) -85 NM_001324091 26035 Hs.183006 NM_015554 ENSG00000138604 GLCE HSEPI glucuronic acid epimerase protein-coding chr4-261 chr4 40056129 40056373 + 28.6 0.000 promoter-TSS (NM_018177) promoter-TSS (NM_018177) -599 NM_001318359 55728 Hs.391463 NM_018177 ENSG00000078177 N4BP2 B3BP NEDD4 binding protein 2 protein-coding chr3-447 chr3 100982771 100983015 + 28.6 0.000 intron (NM_001349332, intron 1 of 35) intron (NM_001349332, intron 1 of 35) 10597 NM_001349329 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr16-315 chr16 56519768 56520012 + 28.6 0.000 5' UTR (NM_031885, exon 1 of 17) 5' UTR (NM_031885, exon 1 of 17) 134 NM_031885 583 Hs.333738 NM_031885 ENSG00000125124 BBS2 BBS|RP74 Bardet-Biedl syndrome 2 protein-coding chr13-72 chr13 102773797 102774041 + 28.6 0.000 promoter-TSS (NM_001286775) promoter-TSS (NM_001286775) -98 NR_104590 93081 Hs.398111 NM_138779 ENSG00000151287 TEX30 C13orf27 testis expressed 30 protein-coding chr2-828 chr2 26299340 26299584 + 28.4 0.000 Intergenic HERV15-int|LTR|ERV1 19587 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr1-937 chr1 60171908 60172152 + 28.4 0.000 Intergenic Intergenic -98260 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr13-134 chr13 75633297 75633541 + 28.4 0.000 intron (NM_005358, intron 2 of 29) intron (NM_005358, intron 2 of 29) 2575 NR_120411 101927155 Hs.564550 NR_120410 ENSG00000261105 LMO7-AS1 UCHL3-AS1 LMO7 antisense RNA 1 ncRNA chr11-311 chr11 36149810 36150054 + 28.4 0.000 intron (NM_001304263, intron 3 of 4) intron (NM_001304263, intron 3 of 4) -72031 NR_135064 101928510 Hs.675857 NR_135064 LOC101928510 - uncharacterized LOC101928510 ncRNA chr5-346 chr5 136066886 136067130 + 28.4 0.000 Intergenic Intergenic 13590 NR_030583 100126299 NR_030583 ENSG00000278815 VTRNA2-1 CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|pre-miR-886|svtRNA2-1a vault RNA 2-1 ncRNA chr3-198 chr3 52057184 52057428 + 28.4 0.000 promoter-TSS (NM_001947) promoter-TSS (NM_001947) -735 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr2-151 chr2 178072715 178072959 + 28.4 0.000 promoter-TSS (NM_016953) promoter-TSS (NM_016953) -60 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr18-108 chr18 10122201 10122445 + 28.4 0.000 Intergenic Intergenic 208307 NM_194434 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr7-335 chr7 155230305 155230549 + 28.4 0.000 Intergenic Intergenic -67345 NM_001346593 3638 Hs.520819 NM_005542 ENSG00000186480 INSIG1 CL6 insulin induced gene 1 protein-coding chr1-482 chr1 41003679 41003923 + 28.4 0.000 intron (NR_125440, intron 12 of 17) MLT1H2|LTR|ERVL-MaLR -10789 NR_037868 100507178 Hs.660056 NR_037868 ENSG00000281207 SLFNL1-AS1 - SLFNL1 antisense RNA 1 ncRNA chr19-610 chr19 57435351 57435595 + 28.4 0.000 5' UTR (NM_001321953, exon 1 of 2) 5' UTR (NM_001321953, exon 1 of 2) 148 NM_001321952 388567 Hs.467358 NM_001023561 ENSG00000186230 ZNF749 - zinc finger protein 749 protein-coding chr1-1562 chr1 162062663 162062907 + 28.4 0.000 Intergenic Intergenic -6906 NM_014697 9722 Hs.731942 NM_014697 ENSG00000198929 NOS1AP 6330408P19Rik|CAPON nitric oxide synthase 1 adaptor protein protein-coding chr10-162 chr10 125161193 125161437 + 28.4 0.000 promoter-TSS (NM_001083914) promoter-TSS (NM_001083914) -285 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding chr7-526 chr7 106421484 106421728 + 28.4 0.000 Intergenic Intergenic -136623 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr22-244 chr22 36462148 36462392 + 28.4 0.000 Intergenic Intergenic 19370 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr6-450 chr6 34771858 34772102 + 28.4 0.000 intron (NR_029472, intron 4 of 4) MER102b|DNA|hAT-Charlie 14475 NM_003093 6631 Hs.1063 NM_003093 ENSG00000124562 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding chr11-175 chr11 35944294 35944538 + 28.4 0.000 intron (NM_001304264, intron 1 of 5) CpG 354 NM_174902 143458 Hs.745134 NM_174902 ENSG00000179241 LDLRAD3 LRAD3 low density lipoprotein receptor class A domain containing 3 protein-coding chr17-415 chr17 72716314 72716558 + 28.4 0.000 intron (NM_001352692, intron 7 of 9) intron (NM_001352692, intron 7 of 9) -75964 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr10-211 chr10 6721440 6721684 + 28.4 0.000 Intergenic Intergenic -15820 NR_138480 108570035 Hs.568834 NR_138480 LINP1 - lncRNA in non-homologous end joining pathway 1 ncRNA chr4-480 chr4 169260761 169261005 + 28.4 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 10073 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr15-134 chr15 98896983 98897227 + 28.4 0.000 intron (NM_000875, intron 4 of 20) intron (NM_000875, intron 4 of 20) 108551 NM_001102612 145814 Hs.592021 NM_001102612 ENSG00000183571 PGPEP1L - pyroglutamyl-peptidase I like protein-coding chrX-46 chrX 13734667 13734911 + 28.4 0.000 promoter-TSS (NM_001330209) promoter-TSS (NM_001330209) 41 NM_003611 8481 Hs.6483 NM_003611 ENSG00000046651 OFD1 71-7A|CXorf5|JBTS10|RP23|SGBS2 OFD1 centriole and centriolar satellite protein protein-coding chr7-473 chr7 81769931 81770175 + 28.4 0.000 promoter-TSS (NM_000601) promoter-TSS (NM_000601) -6 NM_001010932 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding chrX-90 chrX 106802352 106802596 + 28.4 0.000 promoter-TSS (NM_017752) promoter-TSS (NM_017752) -199 NM_198881 54885 Hs.351798 NM_017752 ENSG00000133138 TBC1D8B GRAMD8B TBC1 domain family member 8B protein-coding chr1-934 chr1 47317895 47318139 + 28.4 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -3870 NM_001282939 6491 Hs.525198 NM_003035 ENSG00000123473 STIL MCPH7|SIL STIL centriolar assembly protein protein-coding chr12-122 chr12 120116827 120117071 + 28.4 0.000 promoter-TSS (NM_001167606) promoter-TSS (NM_001167606) -196 NM_001167606 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr2-294 chr2 127107350 127107594 + 28.4 0.000 promoter-TSS (NM_139351) promoter-TSS (NM_139351) -318 NM_139348 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr9-810 chr9 128488344 128488588 + 28.4 0.000 intron (NM_153433, intron 14 of 20) MIRb|SINE|MIR -16226 NM_001499 2733 Hs.522418 NM_001499 ENSG00000119392 GLE1 CAAHC|CAAHD|GLE1L|LCCS|LCCS1|hGLE1 GLE1 RNA export mediator protein-coding chr6-326 chr6 99568656 99568900 + 28.4 0.000 promoter-TSS (NM_005190) promoter-TSS (NM_005190) 36 NM_001013399 892 Hs.430646 NM_005190 ENSG00000112237 CCNC CycC|SRB11|hSRB11 cyclin C protein-coding chr16-637 chr16 21118328 21118572 + 28.4 0.000 intron (NM_001347886, intron 11 of 61) AluJo|SINE|Alu 32396 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chr12-319 chr12 26746318 26746562 + 28.4 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 86754 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr1-463 chr1 17866518 17866762 + 28.4 0.000 Intergenic Intergenic 111307 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chrX-25 chrX 16712544 16712788 + 28.4 0.000 promoter-TSS (NM_175859) promoter-TSS (NM_175859) 3 NM_175859 56474 Hs.227049 NM_019857 ENSG00000047230 CTPS2 - CTP synthase 2 protein-coding chr1-1349 chr1 61318556 61318800 + 28.4 0.000 intron (NM_001134673, intron 3 of 10) intron (NM_001134673, intron 3 of 10) -65160 NR_104180 645030 Hs.632410 NR_104180 ENSG00000237853 NFIA-AS1 - NFIA antisense RNA 1 ncRNA chr9-330 chr9 87812769 87813013 + 28.4 0.000 Intergenic Intergenic -31854 NR_033405 1518 Hs.726015 NR_033405 CTSLP8 CTSL1P8 cathepsin L pseudogene 8 pseudo chr3-534 chr3 100401361 100401605 + 28.4 0.000 promoter-TSS (NM_001085451) promoter-TSS (NM_001085451) -56 NM_001085451 348801 Hs.591294 NM_001085451 ENSG00000206535 LNP1 NP3 leukemia NUP98 fusion partner 1 protein-coding chr13-211 chr13 46296033 46296277 + 28.3 0.000 TTS (NR_047493) TTS (NR_047493) 1689 NR_047493 100861554 Hs.90866 NR_047493 ENSG00000261097 LINC00563 - long intergenic non-protein coding RNA 563 ncRNA chr11-499 chr11 57499721 57499965 + 28.3 0.000 intron (NM_001198810, intron 5 of 14) CpG 15066 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr5-649 chr5 9766451 9766695 + 28.3 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -87804 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr8-357 chr8 118635036 118635280 + 28.3 0.000 intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -13195 NM_001349811 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding chrX-164 chrX 71315988 71316232 + 28.3 0.000 Intergenic L2c|LINE|L2 14360 NM_012278 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr12-1208 chr12 107027583 107027827 + 28.3 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) -40539 NM_025198 80298 Hs.5009 NM_025198 ENSG00000120832 MTERF2 MTERFD3|mTERFL mitochondrial transcription termination factor 2 protein-coding chr10-392 chr10 29849413 29849657 + 28.3 0.000 Intergenic Intergenic -112599 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr15-346 chr15 34056231 34056475 + 28.3 0.000 intron (NM_012125, intron 2 of 2) MIR3|SINE|MIR -17149 NM_020371 57099 Hs.555966 NM_020371 ENSG00000169857 AVEN PDCD12 apoptosis and caspase activation inhibitor protein-coding chr17-333 chr17 5776276 5776520 + 28.3 0.000 intron (NR_040000, intron 1 of 3) MLT1H|LTR|ERVL-MaLR 4164 NR_040000 339166 Hs.736088 NR_040000 ENSG00000284837 LOC339166 - uncharacterized LOC339166 ncRNA chr7-206 chr7 66654931 66655175 + 28.3 0.000 intron (NM_001367722, intron 1 of 7) CpG 486 NM_001367726 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr11-526 chr11 79236685 79236929 + 28.3 0.000 intron (NM_001098816, intron 2 of 33) intron (NM_001098816, intron 2 of 33) 165302 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-597 chr2 30113791 30114035 + 28.3 0.000 Intergenic Intergenic -33094 NM_001127400 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding chr2-1409 chr2 238492850 238493094 + 28.3 0.000 Intergenic L1MDa|LINE|L1 62527 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr22-215 chr22 45978666 45978910 + 28.3 0.000 Intergenic CpG-19213 -1626 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr2-235 chr2 230957332 230957576 + 28.3 0.000 Intergenic MER44C|DNA|TcMar-Tigger -32212 NM_005683 9290 Hs.114545 NM_005683 ENSG00000135898 GPR55 LPIR1 G protein-coupled receptor 55 protein-coding chr11-374 chr11 116193602 116193846 + 28.3 0.000 Intergenic Intergenic -433524 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr17-170 chr17 28717592 28717836 + 28.3 0.000 5' UTR (NM_001256281, exon 1 of 10) 5' UTR (NM_001256281, exon 1 of 10) 154 NM_001256281 83871 Hs.301853 NM_031934 ENSG00000109113 RAB34 NARR|RAB39|RAH RAB34, member RAS oncogene family protein-coding chr17-367 chr17 1989171 1989415 + 28.3 0.000 intron (NM_178568, intron 1 of 1) L3|LINE|CR1 -28423 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr20-138 chr20 14337496 14337740 + 28.3 0.000 promoter-TSS (NM_013281) promoter-TSS (NM_013281) -6 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr11-317 chr11 67630536 67630780 + 28.3 0.000 promoter-TSS (NM_001243750) promoter-TSS (NM_001243750) -721 NM_181843 254552 Hs.433329 NM_181843 ENSG00000167799 NUDT8 - nudix hydrolase 8 protein-coding chr7-314 chr7 5397080 5397324 + 28.3 0.000 intron (NM_001080495, intron 2 of 29) intron (NM_001080495, intron 2 of 29) 26344 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr6-243 chr6 20160407 20160651 + 28.3 0.000 intron (NM_001080480, intron 1 of 12) L1M2|LINE|L1 51940 NR_073465 154141 Hs.377830 NM_001080480 ENSG00000172197 MBOAT1 LPEAT1|LPLAT|LPLAT 1|LPSAT|OACT1|dJ434O11.1 membrane bound O-acyltransferase domain containing 1 protein-coding chr13-215 chr13 64929185 64929429 + 28.3 0.000 Intergenic ERVL-B4-int|LTR|ERVL -853296 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr3-601 chr3 114214125 114214369 + 28.3 0.000 Intergenic Intergenic -14840 NM_001282563 1814 Hs.121478 NM_000796 ENSG00000151577 DRD3 D3DR|ETM1|FET1 dopamine receptor D3 protein-coding chr17-387 chr17 1491120 1491364 + 28.3 0.000 intron (NM_001080779, intron 1 of 31) CpG 437 NM_033375 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr1-444 chr1 156053023 156053267 + 28.3 0.000 intron (NM_001304342, intron 1 of 10) intron (NM_001304342, intron 1 of 10) 653 NM_001304342 56893 Hs.283739 NM_020131 ENSG00000160803 UBQLN4 A1U|A1Up|C1orf6|CIP75|UBIN ubiquilin 4 protein-coding chr9-168 chr9 6757441 6757685 + 28.3 0.000 non-coding (NR_130707, exon 1 of 15) non-coding (NR_130707, exon 1 of 15) 213 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr16-550 chr16 85466001 85466245 + 28.3 0.000 Intergenic Intergenic -145286 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr19-301 chr19 13023078 13023322 + 28.3 0.000 promoter-TSS (NM_001271044) promoter-TSS (NM_001271044) -772 NM_001271044 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr17-443 chr17 39950489 39950733 + 28.3 0.000 Intergenic Intergenic 9137 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr6-425 chr6 145206520 145206764 + 28.3 0.000 Intergenic Intergenic 480235 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding chr1-845 chr1 61952441 61952685 + 28.3 0.000 intron (NM_001350145, intron 27 of 43) intron (NM_001350145, intron 27 of 43) 106488 NR_162146 113219465 NR_162146 MIR12132 - microRNA 12132 ncRNA chr4-560 chr4 159175642 159175886 + 28.3 0.000 intron (NM_001351724, intron 1 of 30) intron (NM_001351724, intron 1 of 30) -46870 NR_037459 100500881 NR_037459 ENSG00000264105 MIR3688-1 MIR3688|mir-3688-1 microRNA 3688-1 ncRNA chr12-141 chr12 51424705 51424949 + 28.3 0.000 promoter-TSS (NM_001258403) promoter-TSS (NM_001258403) -4 NR_047672 9498 Hs.4749 NM_004858 ENSG00000050438 SLC4A8 NBC3|NDCBE solute carrier family 4 member 8 protein-coding chr17-882 chr17 75033716 75033960 + 28.3 0.000 intron (NR_110835, intron 1 of 7) intron (NR_110835, intron 1 of 7) 1271 NR_110835 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr19-671 chr19 7929251 7929495 + 28.3 0.000 intron (NM_006351, intron 10 of 12) intron (NM_006351, intron 10 of 12) -3238 NM_206833 404217 Hs.657978 NM_206833 ENSG00000178531 CTXN1 CTXN cortexin 1 protein-coding chr3-652 chr3 46558506 46558750 + 28.3 0.000 intron (NR_073385, intron 2 of 2) L1MEf|LINE|L1 1230 NR_073385 83598 Hs.570630 NR_073385 ENSG00000268324 LRRC2-AS1 LUZP3|LUZP3P|LUZPP1 LRRC2 antisense RNA 1 ncRNA chr15-501 chr15 68298985 68299229 + 28.3 0.000 3' UTR (NM_001004439, exon 30 of 30) 3' UTR (NM_001004439, exon 30 of 30) 21362 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr16-464 chr16 974412 974656 + 28.3 0.000 intron (NM_001352017, intron 1 of 11) intron (NM_001352017, intron 1 of 11) -3535 NM_022773 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr6-723 chr6 127051873 127052117 + 28.3 0.000 Intergenic L1PA16|LINE|L1 -66676 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr12-504 chr12 6925643 6925887 + 28.1 0.000 intron (NM_001007026, intron 1 of 9) intron (NM_001007026, intron 1 of 9) 1306 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr17-430 chr17 81867374 81867618 + 28.1 0.000 TTS (NM_001301243) TTS (NM_001301243) 3501 NM_001301241 396 Hs.159161 NM_004309 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor alpha protein-coding chr12-584 chr12 64452910 64453154 + 28.1 0.000 intron (NM_013254, intron 1 of 20) intron (NM_013254, intron 1 of 20) 912 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr13-253 chr13 76711544 76711788 + 28.1 0.000 Intergenic Intergenic 174739 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chr2-934 chr2 45939056 45939300 + 28.1 0.000 intron (NM_005400, intron 2 of 14) MIRc|SINE|MIR 287503 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr5-182 chr5 151080735 151080979 + 28.1 0.000 intron (NM_001252390, intron 1 of 17) CpG 177 NM_001252393 10318 Hs.355141 NM_006058 ENSG00000145901 TNIP1 ABIN-1|NAF1|VAN|nip40-1 TNFAIP3 interacting protein 1 protein-coding chr6-336 chr6 159918957 159919201 + 28.1 0.000 Intergenic Intergenic 28091 NM_001366704 4142 Hs.99900 NM_002377 ENSG00000130368 MAS1 MAS|MGRA MAS1 proto-oncogene, G protein-coupled receptor protein-coding chr22-141 chr22 23145205 23145449 + 28.1 0.000 promoter-TSS (NM_004914) promoter-TSS (NM_004914) 3 NM_004914 9609 Hs.353024 NM_004914 ENSG00000100228 RAB36 - RAB36, member RAS oncogene family protein-coding chr5-169 chr5 139710778 139711022 + 28.1 0.000 Intergenic CpG 35323 NR_105053 101929696 Hs.147408 NR_105052 ENSG00000249131 PSD2-AS1 - PSD2 antisense RNA 1 ncRNA chr15-238 chr15 74790693 74790937 + 28.1 0.000 intron (NM_001354988, intron 1 of 14) L2b|LINE|L2 -2058 NR_039738 100616183 NR_039738 ENSG00000264386 MIR4513 - microRNA 4513 ncRNA chr14-249 chr14 105398277 105398521 + 28.1 0.000 promoter-TSS (NM_001195082) promoter-TSS (NM_001195082) -139 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr11-820 chr11 93524191 93524435 + 28.1 0.000 intron (NM_020179, intron 1 of 2) intron (NM_020179, intron 1 of 2) 19078 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr4-172 chr4 86117927 86118171 + 28.1 0.000 intron (NM_001363657, intron 4 of 13) LTR67B|LTR|ERVL -1757 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA chr9-271 chr9 26947030 26947274 + 28.1 0.000 promoter-TSS (NM_001099222) promoter-TSS (NM_001099222) 90 NM_001031689 9373 Hs.27182 NM_004253 ENSG00000137055 PLAA DOA1|NDMSBA|PLA2P|PLAP phospholipase A2 activating protein protein-coding chr1-839 chr1 50841837 50842081 + 28.1 0.000 intron (NM_007051, intron 2 of 18) intron (NM_007051, intron 2 of 18) 118308 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding chr2-301 chr2 197204962 197205206 + 28.1 0.000 intron (NM_153697, intron 1 of 9) MER5B|DNA|hAT-Charlie 7093 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA chr8-127 chr8 29066171 29066415 + 28.1 0.000 TTS (NM_015254) TTS (NM_015254) 174979 NM_001324382 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding chr1-913 chr1 15795114 15795358 + 28.1 0.000 Intergenic Intergenic 12463 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr9-764 chr9 5611628 5611872 + 28.1 0.000 Intergenic Intergenic -17357 NM_020829 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr17-362 chr17 81711752 81711996 + 28.1 0.000 promoter-TSS (NM_001270953) promoter-TSS (NM_001270953) -362 NM_001270953 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr10-325 chr10 75235886 75236130 + 28.1 0.000 promoter-TSS (NM_144589) promoter-TSS (NM_144589) -51 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chrX-143 chrX 107118788 107119032 + 28.1 0.000 promoter-TSS (NR_136729) promoter-TSS (NR_136729) -88 NM_001324242 55285 Hs.139053 NM_018301 ENSG00000089682 RBM41 - RNA binding motif protein 41 protein-coding chr8-367 chr8 144522274 144522518 + 28.1 0.000 TTS (NM_001024678) TTS (NM_001024678) 4404 NM_014665 9684 Hs.459391 NM_014665 ENSG00000160959 LRRC14 LRRC14A leucine rich repeat containing 14 protein-coding chr14-246 chr14 101403028 101403272 + 28.1 0.000 Intergenic Intergenic 4772 NR_126006 338002 Hs.124848 NR_126006 ENSG00000259023 LINC00524 C14orf71 long intergenic non-protein coding RNA 524 ncRNA chr11-470 chr11 65481709 65481953 + 28.1 0.000 Intergenic Intergenic -15907 NR_144567 378938 Hs.621695 NR_002819 ENSG00000251562 MALAT1 HCN|LINC00047|NCRNA00047|NEAT2|PRO2853 metastasis associated lung adenocarcinoma transcript 1 ncRNA chr5-279 chr5 181261053 181261297 + 28.1 0.000 promoter-TSS (NM_032765) promoter-TSS (NM_032765) -32 NM_001346050 84851 Hs.458412 NM_032765 ENSG00000183718 TRIM52 RNF102 tripartite motif containing 52 protein-coding chr1-1421 chr1 183608345 183608589 + 28.1 0.000 Intergenic MER44B|DNA|TcMar-Tigger -17553 NM_001127651 4688 Hs.587558 NM_000433 ENSG00000116701 NCF2 NCF-2|NOXA2|P67-PHOX|P67PHOX neutrophil cytosolic factor 2 protein-coding chr7-653 chr7 106878217 106878461 + 28.1 0.000 intron (NM_001282426, intron 5 of 10) L1ME1|LINE|L1 12860 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr3-787 chr3 152302558 152302802 + 28.1 0.000 intron (NM_207296, intron 1 of 7) intron (NM_207296, intron 1 of 7) 3275 NM_207296 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr20-204 chr20 35619333 35619577 + 28.1 0.000 intron (NM_001317931, intron 9 of 11) CpG-17676 3571 NM_001317931 6676 Hs.123159 NM_003116 ENSG00000061656 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding chr13-225 chr13 21051795 21052039 + 28.1 0.000 intron (NM_014572, intron 1 of 7) AluJo|SINE|Alu 9669 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr2-804 chr2 227366996 227367240 + 28.1 0.000 intron (NM_024795, intron 2 of 3) MER20|DNA|hAT-Charlie 12188 NM_024795 79853 Hs.156652 NM_024795 ENSG00000168955 TM4SF20 PRO994|SLI5|TCCE518 transmembrane 4 L six family member 20 protein-coding chr2-257 chr2 181457194 181457438 + 28.1 0.000 promoter-TSS (NM_000885) promoter-TSS (NM_000885) -70 NM_000885 3676 Hs.72981 NM_000885 ENSG00000115232 ITGA4 CD49D|IA4 integrin subunit alpha 4 protein-coding chr11-541 chr11 133064429 133064673 + 28.1 0.000 intron (NM_001012393, intron 1 of 7) intron (NM_001012393, intron 1 of 7) -120783 NM_001319105 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr20-74 chr20 32457459 32457703 + 28.1 0.000 intron (NM_001351680, intron 2 of 8) intron (NM_001351680, intron 2 of 8) 25909 NM_001351680 140688 Hs.516978 NM_080616 ENSG00000197183 NOL4L C20orf112|C20orf113 nucleolar protein 4 like protein-coding chr9-231 chr9 130138922 130139166 + 28.1 0.000 3' UTR (NM_001136557, exon 20 of 20) 3' UTR (NM_001136557, exon 20 of 20) 5175 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr8-132 chr8 93916811 93917055 + 28.1 0.000 promoter-TSS (NM_001161780) promoter-TSS (NM_001161780) 10 NM_001161780 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr6-134 chr6 3068753 3068997 + 28.1 0.000 intron (NM_001354934, intron 1 of 11) CpG 381 NM_001354933 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr2-1675 chr2 40511816 40512060 + 28.1 0.000 intron (NM_001112802, intron 1 of 7) intron (NM_001112802, intron 1 of 7) 497 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr17-285 chr17 43357076 43357320 + 28.1 0.000 Intergenic PRIMA41-int|LTR|ERV1 31700 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr11-534 chr11 105236715 105236959 + 28.1 0.000 Intergenic L1PA16|LINE|L1 -97068 NM_021571 59082 Hs.56279 NM_021571 ENSG00000255501 CARD18 ICEBERG|UNQ5804|pseudo-ICE caspase recruitment domain family member 18 protein-coding chr10-348 chr10 132612646 132612890 + 28.1 0.000 intron (NM_005539, intron 2 of 15) intron (NM_005539, intron 2 of 15) -68507 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr1-363 chr1 162023765 162024009 + 28.1 0.000 5' UTR (NM_001297713, exon 1 of 8) 5' UTR (NM_001297713, exon 1 of 8) 578 NM_001347700 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr2-604 chr2 46915842 46916086 + 28.1 0.000 promoter-TSS (NM_139279) promoter-TSS (NM_139279) 89 NM_001171510 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr22-177 chr22 29799396 29799640 + 28.1 0.000 intron (NM_001369943, intron 13 of 17) intron (NM_001369943, intron 13 of 17) 32149 NM_013387 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr6-112 chr6 35497277 35497521 + 28.1 0.000 promoter-TSS (NM_003214) promoter-TSS (NM_003214) -320 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr8-690 chr8 133383195 133383439 + 28.0 0.000 Intergenic Intergenic -86013 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr1-1928 chr1 224498213 224498457 + 28.0 0.000 intron (NM_001322302, intron 2 of 6) intron (NM_001322302, intron 2 of 6) 63486 NR_136296 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr2-553 chr2 66839948 66840192 + 28.0 0.000 Intergenic Intergenic -64366 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr8-408 chr8 106398264 106398508 + 28.0 0.000 intron (NM_018002, intron 2 of 15) MER5B|DNA|hAT-Charlie -49538 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding chr8-630 chr8 48764381 48764625 + 28.0 0.000 Intergenic Intergenic -29192 NM_001142857 79645 Hs.23245 NM_024593 ENSG00000034239 EFCAB1 - EF-hand calcium binding domain 1 protein-coding chr17-255 chr17 7015288 7015532 + 28.0 0.000 TTS (NR_037715) TTS (NR_037715) 628 NM_001142798 124944 Hs.511801 NM_174893 ENSG00000258315 C17orf49 BAP18|HEPIS chromosome 17 open reading frame 49 protein-coding chr3-172 chr3 138594255 138594499 + 28.0 0.000 promoter-TSS (NM_001288966) promoter-TSS (NM_001288966) 6 NM_001288966 80321 Hs.531962 NM_024491 ENSG00000114107 CEP70 BITE centrosomal protein 70 protein-coding chr3-804 chr3 190514699 190514943 + 28.0 0.000 intron (NM_001364879, intron 1 of 10) intron (NM_001364879, intron 1 of 10) 736 NM_001364879 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr2-748 chr2 56299404 56299648 + 28.0 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -113756 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr1-595 chr1 98210104 98210348 + 28.0 0.000 promoter-TSS (NR_046088) promoter-TSS (NR_046088) -485 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA chr4-263 chr4 44678404 44678648 + 28.0 0.000 5' UTR (NM_021927, exon 1 of 17) 5' UTR (NM_021927, exon 1 of 17) 106 NM_021927 60558 Hs.546419 NM_021927 ENSG00000151806 GUF1 EF-4|EF4|EIEE40 GUF1 homolog, GTPase protein-coding chr10-305 chr10 132399031 132399275 + 28.0 0.000 intron (NM_001098637, intron 1 of 2) intron (NM_001098637, intron 1 of 2) 1953 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr7-777 chr7 101941712 101941956 + 28.0 0.000 intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 124208 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr20-96 chr20 4824135 4824379 + 28.0 0.000 promoter-TSS (NM_014737) promoter-TSS (NM_014737) -649 NM_014737 9770 Hs.631504 NM_014737 ENSG00000101265 RASSF2 CENP-34|RASFADIN Ras association domain family member 2 protein-coding chr12-444 chr12 115199870 115200114 + 28.0 0.000 Intergenic Intergenic -515817 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr9-119 chr9 112379820 112380064 + 28.0 0.000 promoter-TSS (NM_032303) promoter-TSS (NM_032303) 33 NR_036651 84263 Hs.59486 NM_032303 ENSG00000119471 HSDL2 C9orf99|SDR13C1 hydroxysteroid dehydrogenase like 2 protein-coding chr1-776 chr1 116115486 116115730 + 28.0 0.000 intron (NM_152367, intron 2 of 6) Chap1_Mam|DNA|hAT-Charlie 3853 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr1-248 chr1 225809846 225810090 + 28.0 0.000 promoter-TSS (NM_001291163) promoter-TSS (NM_001291163) -106 NM_001136018 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr15-144 chr15 78931011 78931255 + 28.0 0.000 intron (NM_001319137, intron 8 of 12) intron (NM_001319137, intron 8 of 12) 13965 NM_001319137 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr14-244 chr14 92647170 92647414 + 28.0 0.000 intron (NM_024832, intron 5 of 9) intron (NM_024832, intron 5 of 9) 71058 NM_001319987 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr6-251 chr6 73704395 73704639 + 28.0 0.000 intron (NM_001159588, intron 2 of 31) intron (NM_001159588, intron 2 of 31) 8314 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding chr4-627 chr4 169272311 169272555 + 28.0 0.000 Intergenic Intergenic -1477 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr19-575 chr19 5148308 5148552 + 28.0 0.000 intron (NM_015015, intron 21 of 22) intron (NM_015015, intron 21 of 22) 179317 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr1-1081 chr1 159161154 159161398 + 28.0 0.000 Intergenic Intergenic -10339 NM_001127173 57863 Hs.365689 NM_021189 ENSG00000162706 CADM3 BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3 cell adhesion molecule 3 protein-coding chr8-273 chr8 132143266 132143510 + 28.0 0.000 intron (NM_001204824, intron 9 of 14) intron (NM_001204824, intron 9 of 14) -38123 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding chr17-1352 chr17 57984367 57984611 + 28.0 0.000 intron (NM_007146, intron 1 of 5) intron (NM_007146, intron 1 of 5) 3765 NM_007146 7716 Hs.463569 NM_007146 ENSG00000136451 VEZF1 DB1|ZNF161 vascular endothelial zinc finger 1 protein-coding chr15-34 chr15 74843071 74843315 + 28.0 0.000 promoter-TSS (NR_104308) promoter-TSS (NR_104308) -37 NM_001284364 25989 Hs.513034 NM_001099436 ENSG00000140474 ULK3 - unc-51 like kinase 3 protein-coding chr13-212 chr13 47499833 47500077 + 28.0 0.000 Intergenic Intergenic 432667 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA chr14-389 chr14 105207212 105207456 + 28.0 0.000 Intergenic Intergenic -26011 NM_001318380 256281 Hs.526432 NM_177533 ENSG00000183828 NUDT14 UGPP|UGPPase nudix hydrolase 14 protein-coding chr14-370 chr14 69263338 69263582 + 28.0 0.000 intron (NM_020692, intron 1 of 15) intron (NM_020692, intron 1 of 15) 3302 NM_001168368 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding chr17-695 chr17 45135472 45135716 + 28.0 0.000 promoter-TSS (NM_001135705) promoter-TSS (NM_001135705) -93 NM_001135707 79777 Hs.110298 NM_024722 ENSG00000181513 ACBD4 HMFT0700 acyl-CoA binding domain containing 4 protein-coding chr10-773 chr10 257767 258011 + 28.0 0.000 Intergenic L2a|LINE|L2 77895 NM_001202468 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr4-289 chr4 47814874 47815118 + 28.0 0.000 intron (NM_006587, intron 1 of 21) intron (NM_006587, intron 1 of 21) -16349 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA chr1-1015 chr1 31010343 31010587 + 28.0 0.000 intron (NM_001020658, intron 3 of 21) MLT1F2|LTR|ERVL-MaLR -42228 NR_003066 692200 NR_003066 SNORD103C HBII-251|SNORD85 small nucleolar RNA, C/D box 103C snoRNA chr7-520 chr7 80722884 80723128 + 28.0 0.000 Intergenic Intergenic 76353 NM_001289908 948 Hs.120949 NM_000072 ENSG00000135218 CD36 BDPLT10|CHDS7|FAT|GP3B|GP4|GPIV|PASIV|SCARB3 CD36 molecule protein-coding chr12-1017 chr12 124730374 124730618 + 28.0 0.000 Intergenic L1ME1|LINE|L1 109175 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr7-446 chr7 2209499 2209743 + 28.0 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) 23324 NM_003550 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr3-317 chr3 151086751 151086995 + 28.0 0.000 promoter-TSS (NM_053002) promoter-TSS (NM_053002) 75 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr8-48 chr8 28494155 28494399 + 28.0 0.000 promoter-TSS (NM_145866) promoter-TSS (NM_145866) 65 NM_017412 7976 Hs.40735 NM_017412 ENSG00000104290 FZD3 Fz-3 frizzled class receptor 3 protein-coding chr18-63 chr18 25165274 25165518 + 28.0 0.000 intron (NM_001308225, intron 4 of 6) intron (NM_001308225, intron 4 of 6) -177417 NR_146903 105372030 NR_146903 LINC01894 - long intergenic non-protein coding RNA 1894 ncRNA chr2-390 chr2 38376252 38376496 + 28.0 0.000 5' UTR (NM_001308076, exon 1 of 13) 5' UTR (NM_001308076, exon 1 of 13) 156 NM_001330460 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr1-1366 chr1 88731527 88731771 + 28.0 0.000 intron (NM_001320708, intron 1 of 20) intron (NM_001320708, intron 1 of 20) -46445 NR_110682 101927891 Hs.637231 NR_110682 ENSG00000237505 PKN2-AS1 - PKN2 antisense RNA 1 ncRNA chr16-323 chr16 87968624 87968868 + 27.8 0.000 intron (NM_001173542, intron 1 of 12) intron (NM_001173542, intron 1 of 12) -1272 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr12-170 chr12 57431058 57431302 + 27.8 0.000 promoter-TSS (NM_001330123) promoter-TSS (NM_001330123) -137 NM_001351211 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr4-272 chr4 112857536 112857780 + 27.8 0.000 intron (NM_001354275, intron 1 of 43) intron (NM_001354275, intron 1 of 43) -3329 NM_001354267 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-568 chr1 205750129 205750373 + 27.8 0.000 promoter-TSS (NM_022731) promoter-TSS (NM_022731) -69 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding chr1-565 chr1 193059353 193059597 + 27.8 0.000 promoter-TSS (NM_001350846) promoter-TSS (NM_001350846) 35 NM_001350846 51377 Hs.145469 NM_015984 ENSG00000116750 UCHL5 CGI-70|INO80R|UCH-L5|UCH37 ubiquitin C-terminal hydrolase L5 protein-coding chr16-641 chr16 27597408 27597652 + 27.8 0.000 intron (NM_015202, intron 2 of 27) L1ME3G|LINE|L1 47386 NM_015202 23247 Hs.460459 NM_015202 ENSG00000047578 KIAA0556 JBTS26 KIAA0556 protein-coding chr2-279 chr2 240136171 240136415 + 27.8 0.000 promoter-TSS (NM_001163424) promoter-TSS (NM_001163424) 12 NM_001163424 150678 Hs.293884 NM_138336 ENSG00000172428 COPS9 CSNAP|MYEOV2 COP9 signalosome subunit 9 protein-coding chr18-264 chr18 7512348 7512592 + 27.8 0.000 Intergenic Intergenic -51464 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding chr9-195 chr9 69672966 69673210 + 27.8 0.000 promoter-TSS (NM_001163).2 promoter-TSS (NM_001163).2 -717 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr10-429 chr10 97407285 97407529 + 27.8 0.000 Intergenic Intergenic -6037 NM_001145114 23223 Hs.434251 NM_015179 ENSG00000052749 RRP12 KIAA0690 ribosomal RNA processing 12 homolog protein-coding chr16-176 chr16 67151077 67151321 + 27.8 0.000 promoter-TSS (NM_033309) promoter-TSS (NM_033309) -201 NM_033309 84752 Hs.744158 NM_033309 ENSG00000237172 B3GNT9 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 protein-coding chr19-769 chr19 52638047 52638291 + 27.8 0.000 intron (NM_001348016, intron 1 of 3) CpG 222 NM_001105551 55769 Hs.467210 NM_018300 ENSG00000167766 ZNF83 HPF1|ZNF816B zinc finger protein 83 protein-coding chr17-545 chr17 16419579 16419823 + 27.8 0.000 intron (NM_016113, intron 2 of 14) intron (NM_016113, intron 2 of 14) 4130 NM_016113 51393 Hs.279746 NM_016113 ENSG00000187688 TRPV2 VRL|VRL-1|VRL1 transient receptor potential cation channel subfamily V member 2 protein-coding chr1-352 chr1 45339768 45340012 + 27.8 0.000 promoter-TSS (NM_001293195) promoter-TSS (NM_001293195) 67 NM_001293195 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr12-308 chr12 112978230 112978474 + 27.8 0.000 promoter-TSS (NM_016817) promoter-TSS (NM_016817) -167 NM_002535 4939 Hs.414332 NM_002535 ENSG00000111335 OAS2 - 2'-5'-oligoadenylate synthetase 2 protein-coding chr8-170 chr8 23343723 23343967 + 27.8 0.000 intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 7637 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr1-1920 chr1 212721578 212721822 + 27.8 0.000 Intergenic Intergenic -21860 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding chr2-637 chr2 177242566 177242810 + 27.8 0.000 intron (NM_001313903, intron 1 of 4) intron (NM_001313903, intron 1 of 4) 13322 NR_036075 100422824 NR_036075 ENSG00000265396 MIR3128 mir-3128 microRNA 3128 ncRNA chr13-28 chr13 27620451 27620695 + 27.8 0.000 promoter-TSS (NM_001206559) promoter-TSS (NM_001206559) -44 NM_153371 222484 Hs.132359 NM_153371 ENSG00000139517 LNX2 PDZRN1 ligand of numb-protein X 2 protein-coding chr8-527 chr8 128070009 128070253 + 27.8 0.000 intron (NR_003367, intron 5 of 8) L1ME5|LINE|L1 20979 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA chr2-749 chr2 62411472 62411716 + 27.8 0.000 Intergenic Intergenic 94601 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding chr19-437 chr19 1438974 1439218 + 27.8 0.000 intron (NM_001308226, intron 2 of 3) intron (NM_001308226, intron 2 of 3) 671 NM_001308226 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr20-259 chr20 23116409 23116653 + 27.8 0.000 Intergenic MIR|SINE|MIR 16105 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr13-69 chr13 45464774 45465018 + 27.8 0.000 promoter-TSS (NM_031431) promoter-TSS (NM_031431) -43 NM_031431 83548 Hs.507948 NM_031431 ENSG00000136152 COG3 SEC34 component of oligomeric golgi complex 3 protein-coding chrX-134 chrX 154805523 154805767 + 27.8 0.000 promoter-TSS (NM_002436) promoter-TSS (NM_002436) -118 NM_001166462 4354 Hs.496984 NM_002436 ENSG00000130830 MPP1 AAG12|DXS552E|EMP55|MRG1|PEMP membrane palmitoylated protein 1 protein-coding chr3-424 chr3 184363119 184363363 + 27.8 0.000 promoter-TSS (NM_001278698) promoter-TSS (NM_001278698) -120 NM_001278698 5437 Hs.432574 NM_006232 ENSG00000163882 POLR2H RPABC3|RPB17|RPB8 RNA polymerase II subunit H protein-coding chr11-530 chr11 94563561 94563805 + 27.8 0.000 intron (NR_135094, intron 3 of 3) MER20|DNA|hAT-Charlie -3685 NM_152431 143689 Hs.660188 NM_152431 ENSG00000134627 PIWIL4 HIWI2|MIWI2 piwi like RNA-mediated gene silencing 4 protein-coding chr22-681 chr22 37862893 37863137 + 27.8 0.000 exon (NM_016091, exon 6 of 13) exon (NM_016091, exon 6 of 13) 13596 NM_001242923 51386 Hs.446852 NM_016091 ENSG00000100129 EIF3L EIF3EIP|EIF3S11|EIF3S6IP|HSPC021|HSPC025|MSTP005 eukaryotic translation initiation factor 3 subunit L protein-coding chr10-200 chr10 58267996 58268240 + 27.8 0.000 promoter-TSS (NM_152230) promoter-TSS (NM_152230) -224 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr2-1022 chr2 203783771 203784015 + 27.8 0.000 Intergenic Intergenic 77254 NM_006139 940 Hs.443123 NM_006139 ENSG00000178562 CD28 Tp44 CD28 molecule protein-coding chr16-456 chr16 88826417 88826661 + 27.8 0.000 intron (NM_001323544, intron 11 of 14) intron (NM_001323544, intron 11 of 14) -14611 NM_000485 353 Hs.28914 NM_000485 ENSG00000198931 APRT AMP|APRTD adenine phosphoribosyltransferase protein-coding chr17-490 chr17 42895268 42895512 + 27.8 0.000 intron (NR_027254, intron 1 of 5) intron (NR_027254, intron 1 of 5) 3344 NR_027254 388387 Hs.632257 NM_207388 ENSG00000213373 LINC00671 - long intergenic non-protein coding RNA 671 ncRNA chr9-123 chr9 99104861 99105105 + 27.8 0.000 promoter-TSS (NM_001130916) promoter-TSS (NM_001130916) -130 NM_004612 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr20-166 chr20 41232337 41232581 + 27.8 0.000 intron (NM_015035, intron 2 of 3) MamGypsy2-LTR|LTR|Gypsy 63436 NR_106931 102466912 NR_106931 ENSG00000276169 MIR6871 hsa-mir-6871 microRNA 6871 ncRNA chr16-384 chr16 3871259 3871503 + 27.8 0.000 intron (NM_004380, intron 1 of 30) intron (NM_004380, intron 1 of 30) 8739 NM_001079846 1387 Hs.459759 NM_004380 ENSG00000005339 CREBBP CBP|KAT3A|MKHK1|RSTS|RSTS1 CREB binding protein protein-coding chr17-219 chr17 77830477 77830721 + 27.8 0.000 Intergenic Intergenic 53488 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr18-95 chr18 79366400 79366644 + 27.8 0.000 intron (NR_148360, intron 27 of 31) L1MC4a|LINE|L1 -29408 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr13-198 chr13 19838987 19839231 + 27.8 0.000 intron (NM_001142684, intron 4 of 7) intron (NM_001142684, intron 4 of 7) 24527 NM_001039649 9205 Hs.530988 NM_014242 ENSG00000132950 ZMYM5 HSPC050|MYM|ZNF198L1|ZNF237 zinc finger MYM-type containing 5 protein-coding chr11-441 chr11 111541181 111541425 + 27.8 0.000 intron (NM_178834, intron 1 of 6) CpG 795 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr9-67 chr9 129835290 129835534 + 27.8 0.000 promoter-TSS (NM_016520) promoter-TSS (NM_016520) -5 NM_001008563 10868 Hs.5452 NM_006676 ENSG00000136878 USP20 LSFR3A|VDU2|hVDU2 ubiquitin specific peptidase 20 protein-coding chr1-504 chr1 155140252 155140496 + 27.8 0.000 promoter-TSS (NM_018973) promoter-TSS (NM_018973) 33 NM_018973 54344 Hs.110477 NM_018973 ENSG00000179085 DPM3 CDG1O dolichyl-phosphate mannosyltransferase subunit 3, regulatory protein-coding chr5-566 chr5 14449930 14450174 + 27.8 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -13931 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr8-90 chr8 93754809 93755053 + 27.8 0.000 promoter-TSS (NM_153704) promoter-TSS (NM_153704) 37 NR_024522 91147 Hs.116240 NM_153704 ENSG00000164953 TMEM67 JBTS6|MECKELIN|MKS3|NPHP11|TNEM67 transmembrane protein 67 protein-coding chr5-881 chr5 58318604 58318848 + 27.8 0.000 Intergenic Intergenic 141360 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr3-356 chr3 171640584 171640828 + 27.8 0.000 intron (NM_002662, intron 23 of 26) L1MB7|LINE|L1 169777 NM_002662 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding chr7-519 chr7 76421121 76421365 + 27.8 0.000 intron (NM_007155, intron 1 of 8) AluJo|SINE|Alu -3707 NM_001110354 7784 Hs.656137 NM_007155 ENSG00000188372 ZP3 OOMD3|ZP3A|ZP3B|ZPC|Zp-3 zona pellucida glycoprotein 3 protein-coding chr8-106 chr8 22999892 23000136 + 27.7 0.000 5' UTR (NM_015178, exon 1 of 10) 5' UTR (NM_015178, exon 1 of 10) 435 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr22-120 chr22 43152384 43152628 + 27.7 0.000 intron (NM_001256530, intron 1 of 3) intron (NM_001256530, intron 1 of 3) 571 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr11-710 chr11 21813479 21813723 + 27.7 0.000 Intergenic HERVL18-int|LTR|ERVL -379484 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr9-457 chr9 136825148 136825392 + 27.7 0.000 intron (NM_001173989, intron 2 of 7) intron (NM_001173989, intron 2 of 7) -5687 NR_036251 100422860 NR_036251 ENSG00000265806 MIR4292 - microRNA 4292 ncRNA chr20-32 chr20 310530 310774 + 27.7 0.000 Intergenic Intergenic 13082 NM_033089 85364 Hs.28608 NM_033089 ENSG00000247315 ZCCHC3 C20orf99 zinc finger CCHC-type containing 3 protein-coding chr2-839 chr2 55618721 55618965 + 27.7 0.000 Intergenic Intergenic -1221 NM_001122964 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr7-941 chr7 44064230 44064474 + 27.7 0.000 3' UTR (NM_001122956, exon 13 of 13) 3' UTR (NM_001122956, exon 13 of 13) 1215 NM_000290 5224 Hs.632642 NM_000290 ENSG00000164708 PGAM2 GSD10|PGAM-M|PGAMM phosphoglycerate mutase 2 protein-coding chr17-521 chr17 78875775 78876019 + 27.7 0.000 intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 27304 NM_001243541 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr15-353 chr15 41796938 41797182 + 27.7 0.000 intron (NR_049762, intron 2 of 28) MER112|DNA|hAT-Charlie 22576 NM_001265611 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr15-363 chr15 47096104 47096348 + 27.7 0.000 Intergenic L2a|LINE|L2 -87863 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr7-333 chr7 139109531 139109775 + 27.7 0.000 promoter-TSS (NM_024625) promoter-TSS (NM_024625) 67 NM_001363491 56829 Hs.133512 NM_020119 ENSG00000105939 ZC3HAV1 ARTD13|FLB6421|PARP13|ZAP|ZC3H2|ZC3HDC2 zinc finger CCCH-type containing, antiviral 1 protein-coding chr16-192 chr16 9047719 9047963 + 27.7 0.000 Intergenic Intergenic -43803 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr1-798 chr1 246785308 246785552 + 27.7 0.000 Intergenic Intergenic -4187 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr2-781 chr2 165720551 165720795 + 27.7 0.000 Intergenic Intergenic 73574 NM_004482 2591 Hs.170986 NM_004482 ENSG00000115339 GALNT3 GalNAc-T3|HFTC|HFTC1|HHS polypeptide N-acetylgalactosaminyltransferase 3 protein-coding chr8-409 chr8 106858198 106858442 + 27.7 0.000 Intergenic MIR|SINE|MIR -88076 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr2-341 chr2 74507454 74507698 + 27.7 0.000 exon (NM_032673, exon 1 of 9) exon (NM_032673, exon 1 of 9) 119 NM_032673 84759 Hs.316750 NM_032673 ENSG00000115289 PCGF1 2010002K04Rik|NSPC1|RNF3A-2|RNF68 polycomb group ring finger 1 protein-coding chr1-1500 chr1 30670220 30670464 + 27.7 0.000 Intergenic Intergenic -48430 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr2-434 chr2 10911801 10912045 + 27.7 0.000 promoter-TSS (NM_002236) promoter-TSS (NM_002236) -11 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding chr2-978 chr2 110655790 110656034 + 27.7 0.000 exon (NM_004336, exon 16 of 25) exon (NM_004336, exon 16 of 25) 2337 NR_132975 106635550 NR_132975 SNORD132 - small nucleolar RNA, C/D box 132 snoRNA chr8-203 chr8 20268688 20268932 + 27.7 0.000 intron (NM_021020, intron 1 of 3) intron (NM_021020, intron 1 of 3) 4725 NM_001362884 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr4-517 chr4 39478203 39478447 + 27.7 0.000 3' UTR (NM_006859, exon 11 of 11) 3' UTR (NM_006859, exon 11 of 11) -1930 NR_026854 401127 Hs.383197 NR_026854 ENSG00000224097 LOC401127 - WD repeat domain 5 pseudogene pseudo chr17-162 chr17 869095 869339 + 27.7 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) -5106 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr1-611 chr1 182290271 182290515 + 27.7 0.000 intron (NR_104175, intron 2 of 2) intron (NR_104175, intron 2 of 2) 23668 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr6-412 chr6 110328018 110328262 + 27.7 0.000 intron (NM_001123364, intron 1 of 4) intron (NM_001123364, intron 1 of 4) 1918 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chrX-83 chrX 130165682 130165926 + 27.7 0.000 promoter-TSS (NM_004208) promoter-TSS (NM_004208) 37 NM_004208 9131 Hs.424932 NM_004208 ENSG00000156709 AIFM1 AIF|CMT2D|CMTX4|COWCK|COXPD6|DFNX5|NADMR|NAMSD|PDCD8 apoptosis inducing factor mitochondria associated 1 protein-coding chr16-156 chr16 68245179 68245423 + 27.7 0.000 promoter-TSS (NM_001363551) promoter-TSS (NM_001363551) -72 NM_001363551 23659 Hs.632199 NM_012320 ENSG00000103066 PLA2G15 ACS|GXVPLA2|LLPL|LPLA2|LYPLA3 phospholipase A2 group XV protein-coding chr3-933 chr3 27431095 27431339 + 27.7 0.000 intron (NM_001258380, intron 6 of 23) intron (NM_001258380, intron 6 of 23) 25561 NM_001258380 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr3-355 chr3 159854807 159855051 + 27.7 0.000 intron (NM_001197109, intron 1 of 6) intron (NM_001197109, intron 1 of 6) 15068 NM_001197109 29970 Hs.134665 NM_014575 ENSG00000151967 SCHIP1 SCHIP-1 schwannomin interacting protein 1 protein-coding chr8-69 chr8 71361944 71362188 + 27.7 0.000 promoter-TSS (NM_000503) promoter-TSS (NM_000503) 3 NM_001288574 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr14-55 chr14 105021018 105021262 + 27.7 0.000 promoter-TSS (NM_145701) promoter-TSS (NM_145701) -57 NM_017955 55038 Hs.34045 NM_017955 ENSG00000170779 CDCA4 HEPP|SEI-3/HEPP cell division cycle associated 4 protein-coding chr7-411 chr7 4613103 4613347 + 27.7 0.000 Intergenic Intergenic -69070 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr11-411 chr11 6319897 6320141 + 27.7 0.000 intron (NM_145040, intron 1 of 1) intron (NM_145040, intron 1 of 1) 482 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr3-454 chr3 136512409 136512653 + 27.7 0.000 intron (NM_005862, intron 7 of 33) HAL1|LINE|L1 239847 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr20-325 chr20 31895134 31895378 + 27.7 0.000 intron (NR_148013, intron 3 of 16) MER65B|LTR|ERV1 15439 NR_160276 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr2-384 chr2 10122482 10122726 + 27.7 0.000 promoter-TSS (NM_001165931) promoter-TSS (NM_001165931) 36 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr1-1518 chr1 65254745 65254989 + 27.7 0.000 Intergenic CpG -9827 NM_001256865 9829 Hs.647643 NM_014787 ENSG00000116675 DNAJC6 DJC6|PARK19 DnaJ heat shock protein family (Hsp40) member C6 protein-coding chr9-295 chr9 35115724 35115968 + 27.5 0.000 promoter-TSS (NR_134455) promoter-TSS (NR_134455) 16 NR_134455 80256 Hs.301696 NM_025182 ENSG00000005238 FAM214B KIAA1539 family with sequence similarity 214 member B protein-coding chr2-599 chr2 37886821 37887065 + 27.5 0.000 Intergenic Intergenic -11080 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr3-882 chr3 142501230 142501474 + 27.5 0.000 intron (NM_001354579, intron 29 of 45) intron (NM_001354579, intron 29 of 45) -53290 NM_001282859 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr5-123 chr5 139392287 139392531 + 27.5 0.000 exon (NM_001161546, exon 1 of 1) exon (NM_001161546, exon 1 of 1) -2496 NM_016459 51237 Hs.409563 NM_016459 ENSG00000170476 MZB1 MEDA-7|PACAP|pERp1 marginal zone B and B1 cell specific protein protein-coding chr1-2044 chr1 63775327 63775571 + 27.5 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 1432 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr1-1405 chr1 157310281 157310525 + 27.5 0.000 Intergenic Intergenic -171812 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr13-342 chr13 77208024 77208268 + 27.5 0.000 intron (NM_015057, intron 23 of 82) MER4CL34|LTR|ERV1 118948 NM_015057 23077 Hs.591221 NM_015057 ENSG00000005810 MYCBP2 Myc-bp2|PAM|PHR1|Phr MYC binding protein 2 protein-coding chr18-130 chr18 61952491 61952735 + 27.5 0.000 Intergenic Intergenic -59606 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr9-113 chr9 133793113 133793357 + 27.5 0.000 intron (NM_001134398, intron 12 of 29) intron (NM_001134398, intron 12 of 29) -53280 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr4-111 chr4 87007056 87007300 + 27.5 0.000 5' UTR (NM_001313959, exon 1 of 20) 5' UTR (NM_001313959, exon 1 of 20) 177 NM_005935 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding chr4-1019 chr4 88958343 88958587 + 27.5 0.000 intron (NM_014883, intron 4 of 23) MSTB-int|LTR|ERVL-MaLR 98720 NM_014883 10144 Hs.97270 NM_014883 ENSG00000138640 FAM13A ARHGAP48|FAM13A1 family with sequence similarity 13 member A protein-coding chr9-356 chr9 79764472 79764716 + 27.5 0.000 Intergenic Intergenic -59936 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr15-138 chr15 41828040 41828284 + 27.5 0.000 promoter-TSS (NM_001198588) promoter-TSS (NM_001198588) 70 NM_001114632 100137047 Hs.198161 NM_001114632 ENSG00000243789 JMJD7 - jumonji domain containing 7 protein-coding chr3-175 chr3 180912454 180912698 + 27.5 0.000 promoter-TSS (NM_001013439) promoter-TSS (NM_001013439) -94 NM_001013439 8087 Hs.478407 NM_005087 ENSG00000114416 FXR1 FXR1P FMR1 autosomal homolog 1 protein-coding chr11-251 chr11 313605 313849 + 27.5 0.000 promoter-TSS (NM_003641) promoter-TSS (NM_003641) -313 NM_003641 8519 Hs.458414 NM_003641 ENSG00000185885 IFITM1 9-27|CD225|DSPA2a|IFI17|LEU13 interferon induced transmembrane protein 1 protein-coding chr11-272 chr11 12287834 12288078 + 27.5 0.000 intron (NM_032867, intron 1 of 8) intron (NM_032867, intron 1 of 8) 1056 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding chr11-770 chr11 120325356 120325600 + 27.5 0.000 intron (NM_001198675, intron 1 of 1) CpG 179 NM_001198675 219902 Hs.643516 NM_174926 ENSG00000181264 TLCD5 TMEM136 TLC domain containing 5 protein-coding chr15-338 chr15 82122837 82123081 + 27.5 0.000 Intergenic MER5A|DNA|hAT-Charlie 34365 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr1-462 chr1 16513710 16513954 + 27.5 0.000 TTS (NR_004400) TTS (NR_004400) 453 NR_004400 26863 NR_004400 ENSG00000206737 RNVU1-18 RNU1-25|RNU1-25P|RNU1-5|RNU1P1|RNU1P9|U1.15|U1P101|U1P15|vU1.18 RNA, variant U1 small nuclear 18 snRNA chr16-211 chr16 56931885 56932129 + 27.5 0.000 promoter-TSS (NM_001272103) promoter-TSS (NM_001272103) -135 NM_014685 9709 Hs.146393 NM_014685 ENSG00000051108 HERPUD1 HERP|Mif1|SUP homocysteine inducible ER protein with ubiquitin like domain 1 protein-coding chr9-1324 chr9 125701265 125701509 + 27.5 0.000 intron (NM_001006619, intron 1 of 10) intron (NM_001006619, intron 1 of 10) 5821 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr3-310 chr3 72234452 72234696 + 27.5 0.000 Intergenic Intergenic 83317 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA chr13-157 chr13 106151613 106151857 + 27.5 0.000 Intergenic L2b|LINE|L2 -224829 NR_163477 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr1-433 chr1 17569712 17569956 + 27.5 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -10719 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr11-375 chr11 118790680 118790924 + 27.5 0.000 intron (NM_004397, intron 1 of 13) CpG 146 NM_001257191 1656 Hs.408461 NM_004397 ENSG00000110367 DDX6 HLR2|P54|RCK DEAD-box helicase 6 protein-coding chr17-388 chr17 1562875 1563119 + 27.5 0.000 promoter-TSS (NM_006224) promoter-TSS (NM_006224) -205 NM_006224 5306 Hs.429819 NM_006224 ENSG00000174238 PITPNA HEL-S-36|PI-TPalpha|PITPN|VIB1A phosphatidylinositol transfer protein alpha protein-coding chr4-388 chr4 184788241 184788485 + 27.5 0.000 intron (NM_001995, intron 3 of 20) MER103C|DNA|hAT-Charlie 10683 NR_003542 643036 Hs.689630 NR_003542 ENSG00000249138 SLED1 - proteoglycan 3, pro eosinophil major basic protein 2 pseudogene pseudo chr7-592 chr7 105932797 105933041 + 27.5 0.000 Intergenic Intergenic -30345 NM_001301161 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding chr2-746 chr2 54945510 54945754 + 27.5 0.000 intron (NM_001039753, intron 27 of 40) intron (NM_001039753, intron 27 of 40) 64640 NM_007008 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr6-951 chr6 35669370 35669614 + 27.5 0.000 intron (NM_001145775, intron 2 of 11) intron (NM_001145775, intron 2 of 11) -4703 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr19-758 chr19 43535522 43535766 + 27.5 0.000 exon (NM_174945, exon 4 of 4) exon (NM_174945, exon 4 of 4) 2456 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr3-469 chr3 30342355 30342599 + 27.5 0.000 Intergenic Intergenic -176391 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr13-132 chr13 51729935 51730179 + 27.5 0.000 intron (NM_052950, intron 6 of 11) L1MB3|LINE|L1 74105 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr7-257 chr7 988646 988890 + 27.5 0.000 exon (NM_017781, exon 9 of 9) exon (NM_017781, exon 9 of 9) 5587 NM_017781 54905 Hs.272795 NM_017781 ENSG00000073067 CYP2W1 - cytochrome P450 family 2 subfamily W member 1 protein-coding chr16-163 chr16 4847418 4847662 + 27.5 0.000 promoter-TSS (NM_032569) promoter-TSS (NM_032569) 59 NM_001079514 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr16-1240 chr16 88869760 88870004 + 27.5 0.000 Intergenic Intergenic -3222 NM_001294328 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr6-460 chr6 46183947 46184191 + 27.5 0.000 Intergenic Intergenic -13059 NM_001290073 59084 Hs.35198 NM_021572 ENSG00000112796 ENPP5 NPP-5|NPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 protein-coding chr1-1114 chr1 235999565 235999809 + 27.5 0.000 intron (NM_002508, intron 12 of 19) intron (NM_002508, intron 12 of 19) 65403 NM_002508 4811 Hs.356624 NM_002508 ENSG00000116962 NID1 NID nidogen 1 protein-coding chr20-64 chr20 34677138 34677382 + 27.5 0.000 promoter-TSS (NM_080476) promoter-TSS (NM_080476) 25 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding chr4-297 chr4 118173947 118174191 + 27.5 0.000 intron (NM_004784, intron 6 of 13) intron (NM_004784, intron 6 of 13) -104693 NR_034011 100093630 Hs.535762 NR_003584 ENSG00000269893 SNHG8 LINC00060|NCRNA00060 small nucleolar RNA host gene 8 ncRNA chr4-603 chr4 78645889 78646133 + 27.5 0.000 promoter-TSS (NR_038304) promoter-TSS (NR_038304) 17 NR_038306 100505702 Hs.235795 NR_038303 LINC01094 - long intergenic non-protein coding RNA 1094 ncRNA chr13-449 chr13 37403957 37404201 + 27.5 0.000 Intergenic Intergenic 80705 NR_125762 103695431 Hs.550637 NR_125762 ENSG00000230390 LINC01048 - long intergenic non-protein coding RNA 1048 ncRNA chr9-641 chr9 24464538 24464782 + 27.5 0.000 Intergenic Intergenic 81016 NM_001271706 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding chr1-355 chr1 84506063 84506307 + 27.5 0.000 promoter-TSS (NM_001310156) promoter-TSS (NM_001310156) -201 NM_001310156 100505741 Hs.584956 NM_022354 ENSG00000122432 SPATA1 SP-2|SPAP1 spermatogenesis associated 1 protein-coding chr1-559 chr1 178543087 178543331 + 27.5 0.000 intron (NR_033186, intron 1 of 2) CpG 413 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr15-155 chr15 73924701 73924945 + 27.4 0.000 intron (NR_040068, intron 1 of 2) intron (NR_040068, intron 1 of 2) -1639 NM_005576 4016 Hs.65436 NM_005576 ENSG00000129038 LOXL1 LOL|LOXL lysyl oxidase like 1 protein-coding chr22-74 chr22 43168441 43168685 + 27.4 0.000 intron (NM_015140, intron 13 of 13) intron (NM_015140, intron 13 of 13) 16628 NM_001256530 706 Hs.202 NM_000714 ENSG00000100300 TSPO BPBS|BZRP|DBI|IBP|MBR|PBR|PBS|PKBS|PTBR|mDRC|pk18 translocator protein protein-coding chr16-562 chr16 89189637 89189881 + 27.4 0.000 intron (NM_004933, intron 7 of 13) MLT2C1|LTR|ERVL 10778 NM_001366322 146429 Hs.447544 NM_001242757 ENSG00000259803 SLC22A31 - solute carrier family 22 member 31 protein-coding chr2-622 chr2 108266857 108267101 + 27.4 0.000 Intergenic Intergenic -21916 NM_176825 6819 Hs.436123 NM_001056 ENSG00000198203 SULT1C2 ST1C1|ST1C2|SULT1C1|humSULTC2 sulfotransferase family 1C member 2 protein-coding chr12-635 chr12 43896728 43896972 + 27.4 0.000 intron (NM_001286213, intron 2 of 6) intron (NM_001286213, intron 2 of 6) 60769 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr11-328 chr11 13277258 13277502 + 27.4 0.000 promoter-TSS (NR_147785) promoter-TSS (NR_147785) -347 NM_001030273 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr7-105 chr7 123534808 123535052 + 27.4 0.000 promoter-TSS (NM_178827) promoter-TSS (NM_178827) -266 NR_104245 154865 Hs.159650 NM_178827 ENSG00000164675 IQUB - IQ motif and ubiquitin domain containing protein-coding chr6-599 chr6 41698519 41698763 + 27.4 0.000 intron (NM_001167827, intron 1 of 8) intron (NM_001167827, intron 1 of 8) 34969 NR_162107 113218489 NR_162107 MIR10398 - microRNA 10398 ncRNA chr7-582 chr7 98284432 98284676 + 27.4 0.000 intron (NM_001159491, intron 2 of 2) intron (NM_001159491, intron 2 of 2) 2868 NM_001159491 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr14-356 chr14 30700641 30700885 + 27.4 0.000 intron (NM_016106, intron 16 of 24) intron (NM_016106, intron 16 of 24) 78444 NM_016106 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding chr16-441 chr16 80803780 80804024 + 27.4 0.000 intron (NM_152342, intron 1 of 6) CpG 696 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding chr12-556 chr12 132030956 132031200 + 27.4 0.000 promoter-TSS (NR_002979) promoter-TSS (NR_002979) -146 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr10-438 chr10 104255755 104255999 + 27.4 0.000 intron (NM_001191002, intron 2 of 4) intron (NM_001191002, intron 2 of 4) 985 NM_004832 9446 Hs.190028 NM_004832 ENSG00000148834 GSTO1 GSTO 1-1|GSTTLp28|HEL-S-21|P28|SPG-R glutathione S-transferase omega 1 protein-coding chr6-356 chr6 74073864 74074108 + 27.4 0.000 intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 4535 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA chr19-501 chr19 1026250 1026494 + 27.4 0.000 promoter-TSS (NM_001303499) promoter-TSS (NM_001303499) -236 NM_201277 1265 Hs.651512 NM_004368 ENSG00000064666 CNN2 - calponin 2 protein-coding chr17-811 chr17 78736001 78736245 + 27.4 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) 779 NM_001365040 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr7-254 chr7 139359535 139359779 + 27.4 0.000 promoter-TSS (NM_001270643) promoter-TSS (NM_001270643) -189 NM_001270643 51631 Hs.731488 NM_016019 ENSG00000146963 LUC7L2 CGI-59|CGI-74|LUC7B2 LUC7 like 2, pre-mRNA splicing factor protein-coding chr2-648 chr2 216013356 216013600 + 27.4 0.000 promoter-TSS (NM_018000) promoter-TSS (NM_018000) 73 NM_018000 55686 Hs.620391 NM_018000 ENSG00000118242 MREG DSU|WDT2 melanoregulin protein-coding chrX-260 chrX 102516428 102516672 + 27.4 0.000 intron (NM_021992, intron 1 of 2) CpG 189 NM_021992 11013 Hs.56145 NM_021992 ENSG00000158164 TMSB15A TMSB15|TMSB15B|TMSL8|TMSNB|Tb15|TbNB thymosin beta 15a protein-coding chr2-818 chr2 239327960 239328204 + 27.4 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) 22620 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr5-325 chr5 140664638 140664882 + 27.4 0.000 promoter-TSS (NM_017706) promoter-TSS (NM_017706) -39 NM_017706 54853 Hs.286261 NM_017706 ENSG00000120314 WDR55 - WD repeat domain 55 protein-coding chr10-507 chr10 63115844 63116088 + 27.4 0.000 Intergenic Intergenic -17281 NM_001282405 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr3-796 chr3 177673377 177673621 + 27.4 0.000 intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -143366 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr1-1818 chr1 115783025 115783269 + 27.4 0.000 Intergenic Intergenic -14342 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr11-146 chr11 57638092 57638336 + 27.4 0.000 Intergenic Intergenic -2984 NR_029673 406919 NR_029673 ENSG00000208009 MIR130A MIRN130A|miRNA130A|mir-130a microRNA 130a ncRNA chr1-1830 chr1 150083930 150084174 + 27.4 0.000 intron (NR_103998, intron 8 of 13) intron (NR_103998, intron 8 of 13) 16276 NM_001279354 11311 Hs.443750 NM_007259 ENSG00000136631 VPS45 H1|H1VPS45|SCN5|VPS45A|VPS45B|VPS54A|VSP45|VSP45A vacuolar protein sorting 45 homolog protein-coding chr10-214 chr10 43408814 43409058 + 27.4 0.000 promoter-TSS (NM_001098205) promoter-TSS (NM_001098205) -52 NM_001098205 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr4-165 chr4 3486866 3487110 + 27.4 0.000 intron (NM_001363811, intron 3 of 7) intron (NM_001363811, intron 3 of 7) 2444 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr9-311 chr9 128098402 128098646 + 27.4 0.000 promoter-TSS (NM_052901) promoter-TSS (NM_052901) 42 NR_049766 114789 Hs.5476 NM_052901 ENSG00000148339 SLC25A25 MCSC|PCSCL|SCAMC-2 solute carrier family 25 member 25 protein-coding chr12-332 chr12 56763152 56763396 + 27.4 0.000 promoter-TSS (NM_003725) promoter-TSS (NM_003725) -50 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr6-170 chr6 34757389 34757633 + 27.4 0.000 promoter-TSS (NM_003093) promoter-TSS (NM_003093) 6 NM_003093 6631 Hs.1063 NM_003093 ENSG00000124562 SNRPC U1C|Yhc1 small nuclear ribonucleoprotein polypeptide C protein-coding chr7-178 chr7 155003080 155003324 + 27.4 0.000 promoter-TSS (NR_028090) promoter-TSS (NR_028090) -78 NM_007349 22976 Hs.443881 NM_007349 ENSG00000157212 PAXIP1 CAGF28|CAGF29|PACIP1|PAXIP1L|PTIP|TNRC2 PAX interacting protein 1 protein-coding chr3-455 chr3 149086218 149086462 + 27.4 0.000 promoter-TSS (NR_046648) promoter-TSS (NR_046648) 8 NR_046648 100873945 Hs.742423 NR_046648 ENSG00000239718 HLTF-AS1 - HLTF antisense RNA 1 ncRNA chr11-915 chr11 66723577 66723821 + 27.4 0.000 Intergenic Intergenic -2300 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr2-662 chr2 235618058 235618302 + 27.4 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -100259 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr17-771 chr17 40464543 40464787 + 27.4 0.000 Intergenic Intergenic 21215 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr1-615 chr1 203907031 203907275 + 27.4 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 45306 NM_001328637 6635 Hs.334612 NM_003094 ENSG00000182004 SNRPE HYPT11|SME|Sm-E|snRNP-E small nuclear ribonucleoprotein polypeptide E protein-coding chr10-493 chr10 785069 785313 + 27.4 0.000 Intergenic Intergenic -95523 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-855 chr6 137241496 137241740 + 27.4 0.000 Intergenic Intergenic -22188 NM_000416 3459 Hs.520414 NM_000416 ENSG00000027697 IFNGR1 CD119|IFNGR|IMD27A|IMD27B interferon gamma receptor 1 protein-coding chr16-142 chr16 84116709 84116953 + 27.4 0.000 5' UTR (NM_003791, exon 1 of 23) 5' UTR (NM_003791, exon 1 of 23) 111 NM_003791 8720 Hs.75890 NM_003791 ENSG00000140943 MBTPS1 PCSK8|S1P|SEDKF|SKI-1 membrane bound transcription factor peptidase, site 1 protein-coding chr16-621 chr16 2267843 2268087 + 27.4 0.000 promoter-TSS (NR_132988) promoter-TSS (NR_132988) -79 NM_006711 10921 Hs.355643 NM_006711 ENSG00000205937 RNPS1 E5.1 RNA binding protein with serine rich domain 1 protein-coding chr8-237 chr8 97519486 97519730 + 27.4 0.000 Intergenic Intergenic -73111 NR_125390 101927066 Hs.732112 NR_125390 LOC101927066 - uncharacterized LOC101927066 ncRNA chr3-247 chr3 27559855 27560099 + 27.4 0.000 Intergenic Intergenic -75593 NM_001321103 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr1-478 chr1 35079246 35079490 + 27.4 0.000 promoter-TSS (NM_001289089) promoter-TSS (NM_001289089) 5 NM_001289089 79830 Hs.471243 NM_024772 ENSG00000197056 ZMYM1 MYM zinc finger MYM-type containing 1 protein-coding chr17-503 chr17 50987061 50987305 + 27.4 0.000 exon (NM_001130528, exon 22 of 30) exon (NM_001130528, exon 22 of 30) 59695 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr7-279 chr7 152676039 152676283 + 27.4 0.000 promoter-TSS (NM_005431) promoter-TSS (NM_005431) -20 NM_005431 7516 Hs.647093 NM_005431 ENSG00000196584 XRCC2 FANCU X-ray repair cross complementing 2 protein-coding chr3-370 chr3 50328228 50328472 + 27.4 0.000 promoter-TSS (NM_007275) promoter-TSS (NM_007275) -112 NM_007275 11334 Hs.517981 NM_007275 ENSG00000114383 TUSC2 C3orf11|FUS1|PAP|PDAP2 tumor suppressor 2, mitochondrial calcium regulator protein-coding chr13-276 chr13 113493360 113493604 + 27.2 0.000 intron (NR_146222, intron 1 of 11) intron (NR_146222, intron 1 of 11) 2461 NM_001349744 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr1-2328 chr1 32681628 32681872 + 27.2 0.000 3' UTR (NM_001161708, exon 4 of 4) 3' UTR (NM_001161708, exon 4 of 4) 21020 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr8-500 chr8 70610400 70610644 + 27.2 0.000 intron (NR_038881, intron 1 of 3) L2c|LINE|L2 1945 NR_038881 286190 Hs.662204 NR_038881 ENSG00000246366 LACTB2-AS1 - LACTB2 antisense RNA 1 ncRNA chr10-870 chr10 80158641 80158885 + 27.2 0.000 intron (NM_145869, intron 14 of 16) intron (NM_145869, intron 14 of 16) 26033 NM_001331125 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr16-364 chr16 28876564 28876808 + 27.2 0.000 Intergenic Intergenic -1802 NM_173201 487 Hs.657344 NM_004320 ENSG00000196296 ATP2A1 ATP2A|SERCA1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 protein-coding chr10-621 chr10 18340696 18340940 + 27.2 0.000 5' UTR (NM_201590, exon 1 of 13) 5' UTR (NM_201590, exon 1 of 13) 109 NM_201590 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr14-312 chr14 32432874 32433118 + 27.2 0.000 intron (NM_004274, intron 1 of 13) MLT1J|LTR|ERVL-MaLR 103698 NM_004274 9472 Hs.509083 NM_004274 ENSG00000151320 AKAP6 ADAP100|ADAP6|AKAP100|PRKA6|mAKAP A-kinase anchoring protein 6 protein-coding chr19-978 chr19 34404128 34404372 + 27.2 0.000 promoter-TSS (NM_001353433) promoter-TSS (NM_001353433) -148 NM_001353433 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr19-439 chr19 1848521 1848765 + 27.2 0.000 promoter-TSS (NM_020695) promoter-TSS (NM_020695) -160 NM_020695 57455 Hs.192477 NM_020695 ENSG00000079313 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 RNA exonuclease 1 homolog protein-coding chr2-904 chr2 25877657 25877901 + 27.2 0.000 intron (NM_018263, intron 1 of 11) CpG 708 NM_018263 55252 Hs.119815 NM_018263 ENSG00000143970 ASXL2 ASXH2|SHAPNS ASXL transcriptional regulator 2 protein-coding chr8-768 chr8 104797908 104798152 + 27.2 0.000 Intergenic Intergenic -209006 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding chr15-189 chr15 81092267 81092511 + 27.2 0.000 Intergenic Intergenic -41881 NM_173528 161502 Hs.130979 NM_173528 ENSG00000156206 CFAP161 C15orf26 cilia and flagella associated protein 161 protein-coding chr16-373 chr16 85513514 85513758 + 27.2 0.000 Intergenic Intergenic -97773 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr6-896 chr6 4351855 4352099 + 27.2 0.000 Intergenic MamTip2|DNA|hAT-Tip100 -136821 NR_149117 105374895 Hs.436882 NR_149117 LINC02533 - long intergenic non-protein coding RNA 2533 ncRNA chr1-526 chr1 1777729 1777973 + 27.2 0.000 intron (NM_001353641, intron 1 of 11) intron (NM_001353641, intron 1 of 11) 619 NM_023018 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr17-649 chr17 73325467 73325711 + 27.2 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -13588 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr1-711 chr1 74732950 74733194 + 27.2 0.000 promoter-TSS (NM_001162916) promoter-TSS (NM_001162916) -22 NM_001889 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding chr1-1850 chr1 156815426 156815670 + 27.2 0.000 promoter-TSS (NM_001007792) promoter-TSS (NM_001007792) -202 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr17-794 chr17 61583271 61583515 + 27.2 0.000 Intergenic Intergenic 7826 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding chr10-322 chr10 70816441 70816685 + 27.2 0.000 intron (NM_003901, intron 1 of 14) intron (NM_003901, intron 1 of 14) 615 NM_003901 8879 Hs.499984 NM_003901 ENSG00000166224 SGPL1 NPHS14|S1PL|SPL sphingosine-1-phosphate lyase 1 protein-coding chr22-256 chr22 17191324 17191568 + 27.2 0.000 intron (NM_001282229, intron 4 of 8) intron (NM_001282229, intron 4 of 8) 8209 NM_177405 51816 Hs.170310 NM_017424 ENSG00000093072 ADA2 ADGF|CECR1|IDGFL|PAN|SNEDS|VAIHS adenosine deaminase 2 protein-coding chr1-999 chr1 16628627 16628871 + 27.2 0.000 intron (NR_026752, intron 1 of 6) intron (NR_026752, intron 1 of 6) 2157 NR_026752 84809 Hs.631865 NR_026752 ENSG00000215908 CROCCP2 CROCCL1 CROCC pseudogene 2 pseudo chr3-598 chr3 99967831 99968075 + 27.2 0.000 intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -3555 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA chr1-926 chr1 38221139 38221383 + 27.2 0.000 Intergenic Intergenic -6494 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr22-258 chr22 20141616 20141860 + 27.2 0.000 intron (NM_001185024, intron 9 of 10) intron (NM_001185024, intron 9 of 10) 9317 NM_001365892 388849 Hs.454905 NM_001243537 ENSG00000234409 CCDC188 - coiled-coil domain containing 188 protein-coding chr15-108 chr15 34342952 34343196 + 27.2 0.000 promoter-TSS (NM_001284293) promoter-TSS (NM_001284293) 87 NM_018648 55505 Hs.14317 NM_018648 ENSG00000182117 NOP10 DKCB1|NOLA3|NOP10P NOP10 ribonucleoprotein protein-coding chr15-174 chr15 57485865 57486109 + 27.2 0.000 intron (NM_032866, intron 8 of 18) intron (NM_032866, intron 8 of 18) -105917 NM_001018091 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr4-123 chr4 139177824 139178068 + 27.2 0.000 promoter-TSS (NM_001371324) promoter-TSS (NM_001371324) -728 NM_001371338 chr5-501 chr5 154446795 154447039 + 27.2 0.000 intron (NM_001131063, intron 1 of 2) CpG 920 NM_001131063 79685 Hs.592566 NM_024632 ENSG00000164576 SAP30L NS4ATP2 SAP30 like protein-coding chr2-917 chr2 33069851 33070095 + 27.2 0.000 intron (NM_206943, intron 3 of 33) intron (NM_206943, intron 3 of 33) -64624 NM_001166264 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr5-453 chr5 33440932 33441176 + 27.2 0.000 non-coding (NR_047678, exon 1 of 18) non-coding (NR_047678, exon 1 of 18) 278 NM_001258438 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr1-739 chr1 246142450 246142694 + 27.2 0.000 intron (NM_022743, intron 5 of 11) MER44C|DNA|TcMar-Tigger 274840 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr16-261 chr16 67246182 67246426 + 27.2 0.000 intron (NM_013241, intron 1 of 21) CpG 1177 NM_001318202 29109 Hs.95231 NM_013241 ENSG00000135723 FHOD1 FHOS formin homology 2 domain containing 1 protein-coding chr12-782 chr12 123713340 123713584 + 27.2 0.000 intron (NM_012463, intron 1 of 19) L2a|LINE|L2 1109 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr14-183 chr14 67674667 67674911 + 27.2 0.000 promoter-TSS (NM_006370) promoter-TSS (NM_006370) -157 NM_006370 10490 Hs.741177 NM_006370 ENSG00000100568 VTI1B VTI1|VTI1-LIKE|VTI1L|VTI2|v-SNARE|vti1-rp1 vesicle transport through interaction with t-SNAREs 1B protein-coding chr18-253 chr18 60466810 60467054 + 27.2 0.000 Intergenic Cheshire|DNA|hAT-Charlie -94157 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr11-713 chr11 33039870 33040114 + 27.2 0.000 promoter-TSS (NM_001145541) promoter-TSS (NM_001145541) -23 NM_001145541 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr5-207 chr5 77893558 77893802 + 27.2 0.000 intron (NR_105012, intron 1 of 1) intron (NR_105012, intron 1 of 1) 9024 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr4-155 chr4 55949037 55949281 + 27.2 0.000 intron (NM_025009, intron 1 of 25) CpG 214 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr6-351 chr6 43093894 43094138 + 27.2 0.000 intron (NM_001270398, intron 1 of 19) MER51A|LTR|ERV1 17202 NM_001270398 5754 Hs.90572 NM_002821 ENSG00000112655 PTK7 CCK-4|CCK4 protein tyrosine kinase 7 (inactive) protein-coding chr20-55 chr20 63956335 63956579 + 27.2 0.000 promoter-TSS (NR_148435) promoter-TSS (NR_148435) -41 NR_148441 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr10-389 chr10 17512595 17512839 + 27.2 0.000 Intergenic MamGypLTR3a|LTR|Gypsy -58122 NR_144322 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding chr3-1038 chr3 154886512 154886756 + 27.2 0.000 Intergenic Intergenic -137490 NM_001354642 4311 Hs.307734 NM_000902 ENSG00000196549 MME CALLA|CD10|CMT2T|NEP|SCA43|SFE membrane metalloendopeptidase protein-coding chr9-451 chr9 134545830 134546074 + 27.2 0.000 Intergenic Intergenic -95853 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr3-374 chr3 120160199 120160443 + 27.2 0.000 Intergenic Intergenic -65874 NM_001354596 2932 Hs.445733 NM_002093 ENSG00000082701 GSK3B - glycogen synthase kinase 3 beta protein-coding chr18-131 chr18 69795772 69796016 + 27.2 0.000 intron (NM_152721, intron 7 of 7) intron (NM_152721, intron 7 of 7) 151979 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr22-292 chr22 45516838 45517082 + 27.1 0.000 intron (NM_006487, intron 1 of 14) intron (NM_006487, intron 1 of 14) 14077 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr1-1001 chr1 18954902 18955146 + 27.1 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) 1652 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr19-594 chr19 29694583 29694827 + 27.1 0.000 Intergenic (GGCCT)n|Simple_repeat|Simple_repeat 20351 NM_001031726 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr7-707 chr7 26091008 26091252 + 27.1 0.000 Intergenic Intergenic -61068 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr3-369 chr3 42117680 42117924 + 27.1 0.000 intron (NM_001349247, intron 1 of 16) intron (NM_001349247, intron 1 of 16) 26445 NM_001042646 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr6-116 chr6 63635567 63635811 + 27.1 0.000 promoter-TSS (NM_001290260) promoter-TSS (NM_001290260) -113 NM_001290259 23469 Hs.348921 NM_015153 ENSG00000118482 PHF3 - PHD finger protein 3 protein-coding chr12-136 chr12 6944531 6944775 + 27.1 0.000 TTS (NR_023317) TTS (NR_023317) 631 NM_138425 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr5-133 chr5 88141347 88141591 + 27.1 0.000 Intergenic CpG 127376 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding chr11-575 chr11 66344935 66345179 + 27.1 0.000 promoter-TSS (NM_015399) promoter-TSS (NM_015399) 47 NM_015399 25855 Hs.100426 NM_015399 ENSG00000174744 BRMS1 - BRMS1 transcriptional repressor and anoikis regulator protein-coding chr17-567 chr17 78384034 78384278 + 27.1 0.000 intron (NR_111989, intron 1 of 8) intron (NR_111989, intron 1 of 8) 5507 NR_110602 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr19-400 chr19 41958637 41958881 + 27.1 0.000 exon (NM_006423, exon 2 of 5) exon (NM_006423, exon 2 of 5) 562 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr3-451 chr3 114451730 114451974 + 27.1 0.000 intron (NM_001348805, intron 7 of 10) intron (NM_001348805, intron 7 of 10) -1741 NR_121661 101929754 Hs.614195 NR_121661 ENSG00000242290 ZBTB20-AS5 - ZBTB20 antisense RNA 5 ncRNA chr12-104 chr12 49707472 49707716 + 27.1 0.000 promoter-TSS (NM_198900) promoter-TSS (NM_198900) -189 NM_175736 91010 Hs.179838 NM_175736 ENSG00000161791 FMNL3 FHOD3|FRL2|WBP-3|WBP3 formin like 3 protein-coding chr4-305 chr4 169337643 169337887 + 27.1 0.000 Intergenic Intergenic -66809 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr1-1056 chr1 96865727 96865971 + 27.1 0.000 Intergenic Intergenic 143211 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr15-58 chr15 73992122 73992366 + 27.1 0.000 promoter-TSS (NM_001256672) promoter-TSS (NM_001256672) 51 NM_001256674 9399 Hs.194816 NM_004809 ENSG00000067221 STOML1 SLP-1|STORP|hUNC-24 stomatin like 1 protein-coding chr5-479 chr5 124474720 124474964 + 27.1 0.000 Intergenic L1ME1|LINE|L1 -36322 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr17-542 chr17 5307942 5308186 + 27.1 0.000 intron (NM_001291581, intron 1 of 16) intron (NM_001291581, intron 1 of 16) 25780 NM_001083585 9135 Hs.584784 NM_004703 ENSG00000029725 RABEP1 RAB5EP|RABPT5 rabaptin, RAB GTPase binding effector protein 1 protein-coding chr9-188 chr9 133993573 133993817 + 27.1 0.000 Intergenic Intergenic -1371 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr11-181 chr11 69013417 69013661 + 27.1 0.000 promoter-TSS (NM_145015) promoter-TSS (NM_145015) -157 NM_001098515 116535 Hs.118513 NM_145015 ENSG00000172935 MRGPRF GPR140|GPR168|MRGF|RTA MAS related GPR family member F protein-coding chr20-192 chr20 4150169 4150413 + 27.1 0.000 intron (NM_001270691, intron 1 of 7) L2b|LINE|L2 1463 NM_175839 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr14-344 chr14 102279854 102280098 + 27.1 0.000 intron (NM_001353828, intron 2 of 12) intron (NM_001353828, intron 2 of 12) 25188 NM_001353829 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr1-493 chr1 68111858 68112102 + 27.1 0.000 intron (NR_040077, intron 6 of 9) intron (NR_040077, intron 6 of 9) -60349 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr2-873 chr2 215784439 215784683 + 27.1 0.000 intron (NR_037195, intron 1 of 9) intron (NR_037195, intron 1 of 9) 58975 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr8-215 chr8 124538953 124539197 + 27.1 0.000 promoter-TSS (NM_005005) promoter-TSS (NM_005005) 10 NM_032026 83940 Hs.170568 NM_032026 ENSG00000147687 TATDN1 CDA11 TatD DNase domain containing 1 protein-coding chr1-1774 chr1 69710895 69711139 + 27.1 0.000 intron (NM_001370785, intron 2 of 26) intron (NM_001370785, intron 2 of 26) 141676 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding chr7-1030 chr7 134620075 134620319 + 27.1 0.000 Intergenic Intergenic -26582 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr14-155 chr14 54366897 54367141 + 27.1 0.000 Intergenic Intergenic -29849 NM_001330173 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding chr7-484 chr7 128828190 128828434 + 27.1 0.000 Intergenic Intergenic -2094 NM_001127487 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr3-502 chr3 156751369 156751613 + 27.1 0.000 intron (NR_038387, intron 1 of 2) intron (NR_038387, intron 1 of 2) 60530 NR_003284 647033 Hs.745109 NR_003284 PA2G4P4 PA2G4L1 proliferation-associated 2G4 pseudogene 4 pseudo chr1-1444 chr1 221093917 221094161 + 27.1 0.000 Intergenic Intergenic -213899 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr5-868 chr5 14870095 14870339 + 27.1 0.000 intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 1561 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr12-242 chr12 57522361 57522605 + 27.1 0.000 promoter-TSS (NM_052897) promoter-TSS (NM_052897) -341 NM_052897 114785 Hs.524523 NM_052897 ENSG00000166987 MBD6 - methyl-CpG binding domain protein 6 protein-coding chr9-878 chr9 35511097 35511341 + 27.1 0.000 intron (NM_001330740, intron 1 of 10) intron (NM_001330740, intron 1 of 10) 21108 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr2-771 chr2 127631649 127631893 + 27.1 0.000 intron (NM_001080527, intron 37 of 46) intron (NM_001080527, intron 37 of 46) -14093 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr1-1415 chr1 178238836 178239080 + 27.1 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) -102493 NM_004841 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr5-553 chr5 173474867 173475111 + 27.1 0.000 Intergenic MIR|SINE|MIR -104645 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr1-271 chr1 54934848 54935092 + 27.1 0.000 Intergenic PRIMAX-int|LTR|ERV1 -45658 NM_182532 199964 Hs.663950 NM_182532 ENSG00000143001 TMEM61 - transmembrane protein 61 protein-coding chr11-944 chr11 104830057 104830301 + 27.1 0.000 Intergenic MER65C|LTR|ERV1 68491 NR_034066 100506742 Hs.476989 NM_001191016 ENSG00000204403 CASP12 CASP-12|CASP12P1 caspase 12 (gene/pseudogene) protein-coding chr7-530 chr7 134613958 134614202 + 27.1 0.000 Intergenic L3|LINE|CR1 -32699 NM_199186 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr10-418 chr10 77501404 77501648 + 27.1 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 136282 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr12-434 chr12 104011285 104011529 + 27.1 0.000 intron (NM_031302, intron 5 of 11) intron (NM_031302, intron 5 of 11) 45535 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr5-443 chr5 9363168 9363412 + 27.1 0.000 intron (NM_003966, intron 3 of 22) intron (NM_003966, intron 3 of 22) -148043 NR_109935 101929338 Hs.675861 NR_109935 ENSG00000251370 SEMA5A-AS1 CTD-2201E9.1 SEMA5A antisense RNA 1 ncRNA chr8-583 chr8 130269041 130269285 + 27.1 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 27370 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr11-799 chr11 65470434 65470678 + 27.1 0.000 Intergenic Intergenic 15270 NR_160549 101927789 NR_160547 LOC101927789 - FAU, ubiquitin like and ribosomal protein S30 fusion pseudogene pseudo chr3-461 chr3 189563993 189564237 + 27.1 0.000 Intergenic Intergenic -32631 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chr18-109 chr18 11947214 11947458 + 27.1 0.000 Intergenic Intergenic -34171 NM_014214 3613 Hs.743311 NM_014214 ENSG00000141401 IMPA2 - inositol monophosphatase 2 protein-coding chr13-43 chr13 44141939 44142183 + 26.9 0.000 promoter-TSS (NR_104064) promoter-TSS (NR_104064) -267 NR_104064 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr10-308 chr10 681902 682146 + 26.9 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) 7644 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr4-765 chr4 162075947 162076191 + 26.9 0.000 intron (NM_020116, intron 2 of 15) intron (NM_020116, intron 2 of 15) 53336 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr16-416 chr16 2912478 2912722 + 26.9 0.000 intron (NM_020912, intron 1 of 8) MER112|DNA|hAT-Charlie 621 NM_001308068 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr1-778 chr1 152162979 152163223 + 26.9 0.000 Intergenic Intergenic -3873 NM_001122965 126638 Hs.376144 NM_152364 ENSG00000215853 RPTN - repetin protein-coding chr12-474 chr12 64010284 64010528 + 26.9 0.000 intron (NM_001346201, intron 3 of 21) intron (NM_001346201, intron 3 of 21) 165706 NM_001346201 57522 Hs.210751 NM_020762 ENSG00000196935 SRGAP1 ARHGAP13|NMTC2 SLIT-ROBO Rho GTPase activating protein 1 protein-coding chr15-149 chr15 40045086 40045330 + 26.9 0.000 intron (NR_040059, intron 1 of 3) intron (NR_040059, intron 1 of 3) 5897 NR_040060 100131089 Hs.386000 NR_040059 ENSG00000248508 SRP14-AS1 - SRP14 antisense RNA1 (head to head) ncRNA chr9-519 chr9 84297241 84297485 + 26.9 0.000 intron (NM_022127, intron 8 of 18) intron (NM_022127, intron 8 of 18) 43395 NM_001199633 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr7-708 chr7 28926891 28927135 + 26.9 0.000 Intergenic Intergenic 31317 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr11-902 chr11 64207714 64207958 + 26.9 0.000 intron (NM_178443, intron 2 of 14) intron (NM_178443, intron 2 of 14) 1115 NM_031471 83706 Hs.180535 NM_031471 ENSG00000149781 FERMT3 KIND3|MIG-2|MIG2B|UNC112C|URP2|URP2SF fermitin family member 3 protein-coding chr12-265 chr12 14836384 14836628 + 26.9 0.000 intron (NM_021071, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 7020 NM_001354646 420 Hs.591158 NM_021071 ENSG00000111339 ART4 ARTC4|CD297|DO|DO/ART4|DOK1 ADP-ribosyltransferase 4 (Dombrock blood group) protein-coding chr12-309 chr12 124321097 124321341 + 26.9 0.000 Intergenic Intergenic 16023 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr12-688 chr12 108722547 108722791 + 26.9 0.000 intron (NM_014325, intron 1 of 10) Tigger16b|DNA|TcMar-Tigger 8174 NM_001276471 23603 Hs.330384 NM_014325 ENSG00000110880 CORO1C HCRNN4 coronin 1C protein-coding chr8-635 chr8 55879573 55879817 + 26.9 0.000 promoter-TSS (NM_001111097) promoter-TSS (NM_001111097) -140 NM_001111097 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr15-322 chr15 48478662 48478906 + 26.9 0.000 intron (NM_000138, intron 32 of 65) intron (NM_000138, intron 32 of 65) 146587 NM_001948 1854 Hs.527980 NM_001948 ENSG00000128951 DUT dUTPase deoxyuridine triphosphatase protein-coding chr12-1068 chr12 24864861 24865105 + 26.9 0.000 intron (NM_001178091, intron 4 of 9) L2b|LINE|L2 37239 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr1-518 chr1 227794447 227794691 + 26.9 0.000 Intergenic Intergenic -21148 NM_183062 339501 Hs.97604 NM_183062 ENSG00000185888 PRSS38 MPN2 serine protease 38 protein-coding chr13-227 chr13 23321354 23321598 + 26.9 0.000 intron (NM_000231, intron 7 of 7) MER44B|DNA|TcMar-Tigger 54032 NM_001278055 26278 Hs.159492 NM_014363 ENSG00000151835 SACS ARSACS|DNAJC29|PPP1R138|SPAX6 sacsin molecular chaperone protein-coding chr2-1640 chr2 25347784 25348028 + 26.9 0.000 Intergenic Intergenic -5316 NM_175629 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr6-172 chr6 39115042 39115286 + 26.9 0.000 promoter-TSS (NM_018322) promoter-TSS (NM_018322) 22 NM_018322 55776 Hs.58382 NM_018322 ENSG00000112167 SAYSD1 C6orf64 SAYSVFN motif domain containing 1 protein-coding chr2-708 chr2 224910029 224910273 + 26.9 0.000 intron (NM_001290263, intron 3 of 55) intron (NM_001290263, intron 3 of 55) 36898 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chr7-210 chr7 100101334 100101578 + 26.9 0.000 promoter-TSS (NM_004722) promoter-TSS (NM_004722) -187 NM_004722 9179 Hs.632317 NM_004722 ENSG00000221838 AP4M1 CPSQ3|MU-4|MU-ARP2|SPG50 adaptor related protein complex 4 subunit mu 1 protein-coding chr12-362 chr12 27821433 27821677 + 26.9 0.000 Intergenic Intergenic 41322 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr4-944 chr4 36168722 36168966 + 26.9 0.000 intron (NR_146894, intron 9 of 32) intron (NR_146894, intron 9 of 32) 75095 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr1-489 chr1 59296729 59296973 + 26.9 0.000 promoter-TSS (NM_001350797) promoter-TSS (NM_001350797) 38 NM_001350798 55277 Hs.444301 NM_018291 ENSG00000172456 FGGY - FGGY carbohydrate kinase domain containing protein-coding chr2-370 chr2 177429987 177430231 + 26.9 0.000 intron (NM_003659, intron 2 of 19) L1PA10|LINE|L1 37336 NM_003659 8540 Hs.516543 NM_003659 ENSG00000018510 AGPS ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY|RCDP3 alkylglycerone phosphate synthase protein-coding chr8-74 chr8 22695098 22695342 + 26.9 0.000 Intergenic CpG-27074 -1740 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr1-923 chr1 32014468 32014712 + 26.9 0.000 intron (NR_073498, intron 1 of 8) CpG 722 NM_001271878 10657 Hs.445893 NM_006559 ENSG00000121774 KHDRBS1 Sam68|p62|p68 KH RNA binding domain containing, signal transduction associated 1 protein-coding chr4-516 chr4 38078789 38079033 + 26.9 0.000 intron (NM_001253912, intron 14 of 20) intron (NM_001253912, intron 14 of 20) -31270 NM_001253913 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr11-384 chr11 11968666 11968910 + 26.9 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 39851 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr16-486 chr16 69907007 69907251 + 26.9 0.000 intron (NM_001270453, intron 5 of 20) Tigger9b|DNA|TcMar-Tigger -17910 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr14-400 chr14 33897148 33897392 + 26.9 0.000 Intergenic Intergenic 53804 NM_001308103 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr12-406 chr12 46831255 46831499 + 26.9 0.000 Intergenic CpG -5380 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr9-655 chr9 69175042 69175286 + 26.9 0.000 intron (NM_001369872, intron 1 of 21) LFSINE_Vert|SINE|tRNA 887 NM_001369872 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chrX-128 chrX 81120873 81121117 + 26.9 0.000 intron (NM_030763, intron 2 of 6) intron (NM_030763, intron 2 of 6) 80918 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chr6-205 chr6 43769112 43769356 + 26.9 0.000 promoter-TSS (NM_001171622) promoter-TSS (NM_001171622) -975 NM_001171629 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr4-461 chr4 73661682 73661926 + 26.9 0.000 Intergenic Intergenic -41173 NM_201431 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding chr18-121 chr18 69817575 69817819 + 26.9 0.000 intron (NM_152721, intron 7 of 7) MLT1B|LTR|ERVL-MaLR 130176 NM_001303618 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr2-1941 chr2 219802420 219802664 + 26.9 0.000 Intergenic L1ME4c|LINE|L1 102347 NR_146975 105373889 Hs.570066 NR_146975 ENSG00000228909 LINC01803 - long intergenic non-protein coding RNA 1803 ncRNA chr5-188 chr5 473744 473988 + 26.9 0.000 promoter-TSS (NR_024158) promoter-TSS (NR_024158) 630 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr8-251 chr8 22010477 22010721 + 26.9 0.000 Intergenic CpG -13535 NM_001286680 10361 Hs.131055 NM_182795 ENSG00000158806 NPM2 - nucleophosmin/nucleoplasmin 2 protein-coding chr12-1239 chr12 118190387 118190631 + 26.9 0.000 promoter-TSS (NM_001346494) promoter-TSS (NM_001346494) 26 NM_001346496 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr19-550 chr19 17205932 17206176 + 26.9 0.000 exon (NM_004145, exon 32 of 40) exon (NM_004145, exon 32 of 40) -9303 NM_018467 55850 Hs.16187 NM_018467 ENSG00000053501 USE1 D12|MDS032|P31|SLT1 unconventional SNARE in the ER 1 protein-coding chr7-414 chr7 6077291 6077535 + 26.9 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -18184 NM_001134335 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding chr1-437 chr1 37808205 37808449 + 26.9 0.000 promoter-TSS (NM_024640) promoter-TSS (NM_024640) -119 NM_024640 79693 Hs.301564 NM_024640 ENSG00000196449 YRDC DRIP3|IRIP|SUA5 yrdC N6-threonylcarbamoyltransferase domain containing protein-coding chr3-311 chr3 98593700 98593944 + 26.9 0.000 promoter-TSS (NM_000097) promoter-TSS (NM_000097) -211 NM_000097 1371 Hs.476982 NM_000097 ENSG00000080819 CPOX COX|CPO|CPX|HCP coproporphyrinogen oxidase protein-coding chr7-278 chr7 151518006 151518250 + 26.9 0.000 intron (NM_005614, intron 1 of 7) intron (NM_005614, intron 1 of 7) 1767 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr12-258 chr12 389513 389757 + 26.9 0.000 promoter-TSS (NM_001042603) promoter-TSS (NM_001042603) 285 NM_001130147 84318 Hs.631656 NM_032358 ENSG00000120647 CCDC77 - coiled-coil domain containing 77 protein-coding chr5-460 chr5 61340976 61341220 + 26.9 0.000 intron (NM_020928, intron 1 of 13) MER6A|DNA|TcMar-Tigger 8840 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr22-150 chr22 19179426 19179670 + 26.9 0.000 promoter-TSS (NM_005984) promoter-TSS (NM_005984) -685 NR_046298 6576 Hs.111024 NM_005984 ENSG00000100075 SLC25A1 CMS23|CTP|D2L2AD|SEA|SLC20A3 solute carrier family 25 member 1 protein-coding chr14-88 chr14 100376022 100376266 + 26.9 0.000 promoter-TSS (NM_001350947) promoter-TSS (NM_001350947) 183 NM_213645 7453 Hs.497599 NM_004184 ENSG00000140105 WARS GAMMA-2|HMN9|IFI53|IFP53 tryptophanyl-tRNA synthetase protein-coding chr17-442 chr17 39003182 39003426 + 26.9 0.000 Intergenic L2|LINE|L2 23806 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chr5-374 chr5 65394069 65394313 + 26.9 0.000 intron (NR_135689, intron 7 of 25) MLT1G1|LTR|ERVL-MaLR 87729 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr18-107 chr18 3538596 3538840 + 26.9 0.000 intron (NM_001242762, intron 6 of 9) intron (NM_001242762, intron 6 of 9) -55396 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr4-535 chr4 95505351 95505595 + 26.9 0.000 intron (NM_003728, intron 1 of 15) intron (NM_003728, intron 1 of 15) 43500 NM_003728 8633 Hs.388565 NM_003728 ENSG00000182168 UNC5C UNC5H3 unc-5 netrin receptor C protein-coding chr12-130 chr12 110450295 110450539 + 26.9 0.000 promoter-TSS (NM_001287222) promoter-TSS (NM_001287222) -6 NM_001287222 10094 Hs.524741 NM_001278556 ENSG00000111229 ARPC3 ARC21|p21-Arc actin related protein 2/3 complex subunit 3 protein-coding chr12-561 chr12 5648726 5648970 + 26.9 0.000 intron (NM_001278596, intron 15 of 25) intron (NM_001278596, intron 15 of 25) 154716 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding chr8-95 chr8 22366982 22367226 + 26.8 0.000 promoter-TSS (NM_001351655) promoter-TSS (NM_001351655) -174 NM_015359 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr5-159 chr5 37771784 37772028 + 26.8 0.000 Intergenic Intergenic 62916 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr7-322 chr7 87219877 87220121 + 26.8 0.000 promoter-TSS (NM_024315) promoter-TSS (NM_024315) -267 NM_024315 79161 Hs.619593 NM_024315 ENSG00000135185 TMEM243 C7orf23|MM-TRAG|MMTRAG transmembrane protein 243 protein-coding chr6-594 chr6 36027511 36027755 + 26.8 0.000 promoter-TSS (NM_001315) promoter-TSS (NM_001315) -44 NM_139014 1432 Hs.485233 NM_001315 ENSG00000112062 MAPK14 CSBP|CSBP1|CSBP2|CSPB1|EXIP|Mxi2|PRKM14|PRKM15|RK|SAPK2A|p38|p38ALPHA mitogen-activated protein kinase 14 protein-coding chr12-293 chr12 38898016 38898260 + 26.8 0.000 intron (NM_153634, intron 1 of 19) intron (NM_153634, intron 1 of 19) 7453 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chr8-337 chr8 33566323 33566567 + 26.8 0.000 intron (NM_024787, intron 1 of 5) CpG 683 NM_024787 79845 Hs.151237 NM_024787 ENSG00000133874 RNF122 - ring finger protein 122 protein-coding chr4-819 chr4 60724781 60725025 + 26.8 0.000 Intergenic LTR16A2|LTR|ERVL -197716 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr6-521 chr6 53193013 53193257 + 26.8 0.000 Intergenic (TCCT)n|Simple_repeat|Simple_repeat -44294 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding chr20-173 chr20 5066053 5066297 + 26.8 0.000 Intergenic Intergenic 46901 NM_001009923 29058 Hs.472024 NM_014145 ENSG00000089063 TMEM230 C20orf30|HSPC274|dJ1116H23.2.1 transmembrane protein 230 protein-coding chr6-402 chr6 72787692 72787936 + 26.8 0.000 intron (NM_001160132, intron 1 of 13) MamRep605|LTR?|LTR? 157319 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr4-413 chr4 54082278 54082522 + 26.8 0.000 Intergenic Intergenic -17763 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr4-177 chr4 122922883 122923127 + 26.8 0.000 promoter-TSS (NM_145207) promoter-TSS (NM_145207) -37 NM_198041 11162 Hs.558459 NM_007083 ENSG00000170917 NUDT6 ASFGF2|FGF-AS|FGF2AS|GFG-1|GFG1 nudix hydrolase 6 protein-coding chr6-609 chr6 85361404 85361648 + 26.8 0.000 Intergenic Intergenic 28660 NR_134634 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr8-560 chr8 42125997 42126241 + 26.8 0.000 Intergenic HAL1b|LINE|L1 -26827 NM_001134296 10947 Hs.654529 NM_006803 ENSG00000070718 AP3M2 AP47B|CLA20|P47B adaptor related protein complex 3 subunit mu 2 protein-coding chr8-86 chr8 22747836 22748080 + 26.8 0.000 intron (NM_001363233, intron 4 of 6) intron (NM_001363233, intron 4 of 6) -54478 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr9-447 chr9 130128847 130129091 + 26.8 0.000 3' UTR (NM_001287346, exon 17 of 17) 3' UTR (NM_001287346, exon 17 of 17) 15250 NR_135124 401554 Hs.522437 NR_135124 ENSG00000196979 GPRACR LncGPR107 GPR107 adjacent cis regulating lncRNA ncRNA chr1-900 chr1 234659583 234659827 + 26.8 0.000 intron (NR_125944, intron 3 of 3) intron (NR_125944, intron 3 of 3) 13416 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr11-315 chr11 65096561 65096805 + 26.8 0.000 intron (NR_073519, intron 1 of 9) intron (NR_073519, intron 1 of 9) 469 NM_013265 738 Hs.277517 NM_013265 ENSG00000149823 VPS51 ANG2|ANG3|C11orf2|C11orf3|FFR VPS51 subunit of GARP complex protein-coding chr8-781 chr8 123661956 123662200 + 26.8 0.000 Intergenic Intergenic -8277 NM_001081675 340359 Hs.450252 NM_001081675 ENSG00000175946 KLHL38 C8ORFK36 kelch like family member 38 protein-coding chr15-205 chr15 74906627 74906871 + 26.8 0.000 exon (NM_001321922, exon 1 of 5) exon (NM_001321922, exon 1 of 5) 102 NR_135846 57184 Hs.367690 NM_020447 ENSG00000178761 FAM219B C15orf17 family with sequence similarity 219 member B protein-coding chr20-347 chr20 58207460 58207704 + 26.8 0.000 Intergenic Intergenic 21071 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding chr1-1418 chr1 182604192 182604436 + 26.8 0.000 promoter-TSS (NM_002928) promoter-TSS (NM_002928) 75 NM_002928 6004 Hs.413297 NM_002928 ENSG00000143333 RGS16 A28-RGS14|A28-RGS14P|RGS-R regulator of G protein signaling 16 protein-coding chr10-344 chr10 121974995 121975239 + 26.8 0.000 promoter-TSS (NM_017615) promoter-TSS (NM_017615) 100 NM_001167865 54780 Hs.258798 NM_017615 ENSG00000107672 NSMCE4A C10orf86|NS4EA|NSE4A NSE4 homolog A, SMC5-SMC6 complex component protein-coding chr4-713 chr4 86749997 86750241 + 26.8 0.000 intron (NM_080684, intron 17 of 44) intron (NM_080684, intron 17 of 44) 99265 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding chr19-417 chr19 15107417 15107661 + 26.8 0.000 intron (NM_001300910, intron 1 of 7) CpG 138 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr2-776 chr2 144712586 144712830 + 26.8 0.000 intron (NR_033870, intron 1 of 4) Eulor4|Unknown|Unknown 44741 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr12-416 chr12 56725250 56725494 + 26.8 0.000 promoter-TSS (NM_001320193) promoter-TSS (NM_001320193) -73 NM_001320193 4666 Hs.505735 NM_005594 ENSG00000196531 NACA HSD48|NAC-alpha|NACA1|skNAC nascent polypeptide associated complex subunit alpha protein-coding chr21-81 chr21 37636520 37636764 + 26.8 0.000 intron (NM_002240, intron 3 of 3) intron (NM_002240, intron 3 of 3) 216343 NM_130438 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr11-719 chr11 35322278 35322522 + 26.8 0.000 intron (NM_004171, intron 1 of 10) intron (NM_004171, intron 1 of 10) 97158 NM_004171 6506 Hs.502338 NM_004171 ENSG00000110436 SLC1A2 EAAT2|EIEE41|GLT-1|HBGT solute carrier family 1 member 2 protein-coding chr2-495 chr2 84992006 84992250 + 26.8 0.000 intron (NM_020122, intron 1 of 6) MIR|SINE|MIR 20967 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr16-229 chr16 75266004 75266248 + 26.8 0.000 promoter-TSS (NM_001170714).2 promoter-TSS (NM_001170714).2 -119 NM_001170720 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr1-675 chr1 1532633 1532877 + 26.8 0.000 intron (NM_001170536, intron 15 of 15) intron (NM_001170536, intron 15 of 15) 7869 NM_001114748 339453 Hs.668654 NM_001114748 ENSG00000205090 TMEM240 C1orf70|SCA21 transmembrane protein 240 protein-coding chr4-121 chr4 102760941 102761185 + 26.8 0.000 promoter-TSS (NM_005908) promoter-TSS (NM_005908) -95 NM_005908 4126 Hs.480415 NM_005908 ENSG00000109323 MANBA MANB1 mannosidase beta protein-coding chr8-648 chr8 68925179 68925423 + 26.8 0.000 intron (NR_039986, intron 3 of 4) intron (NR_039986, intron 3 of 4) 178889 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr8-171 chr8 26383043 26383287 + 26.8 0.000 promoter-TSS (NR_144550) promoter-TSS (NR_144550) 111 NM_004331 665 Hs.131226 NM_004331 ENSG00000104765 BNIP3L BNIP3a|NIX BCL2 interacting protein 3 like protein-coding chr11-571 chr11 64036598 64036842 + 26.8 0.000 intron (NM_014067, intron 3 of 10) CpG 50867 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr14-202 chr14 103345700 103345944 + 26.8 0.000 TTS (NM_001969) TTS (NM_001969) 7973 NR_002964 677811 Hs.658237 NR_002964 ENSG00000272533 SNORA28 ACA28 small nucleolar RNA, H/ACA box 28 snoRNA chr2-490 chr2 36438521 36438765 + 26.8 0.000 intron (NM_016441, intron 2 of 16) intron (NM_016441, intron 2 of 16) 82865 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr4-170 chr4 48269992 48270236 + 26.6 0.000 promoter-TSS (NM_003215) promoter-TSS (NM_003215) -276 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr15-233 chr15 70852603 70852847 + 26.6 0.000 promoter-TSS (NM_001284357) promoter-TSS (NM_001284357) -514 NM_001284357 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr5-316 chr5 123951611 123951855 + 26.6 0.000 Intergenic L2c|LINE|L2 406316 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr17-267 chr17 79796919 79797163 + 26.6 0.000 promoter-TSS (NM_020649) promoter-TSS (NM_020649) 36 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr8-258 chr8 42052312 42052556 + 26.6 0.000 promoter-TSS (NM_006766) promoter-TSS (NM_006766) -447 NM_006766 7994 Hs.491577 NM_006766 ENSG00000083168 KAT6A MOZ|MRD32|MYST-3|MYST3|RUNXBP2|ZC2HC6A|ZNF220 lysine acetyltransferase 6A protein-coding chr8-538 chr8 144014605 144014849 + 26.6 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) 2447 NM_001134374 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr2-1475 chr2 59112232 59112476 + 26.6 0.000 Intergenic Intergenic -105354 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr10-659 chr10 88707691 88707935 + 26.6 0.000 Intergenic Intergenic -16731 NM_001080518 643414 Hs.632092 NM_001080518 ENSG00000204021 LIPK LIPL2|bA186O14.2 lipase family member K protein-coding chr17-569 chr17 81100864 81101108 + 26.6 0.000 intron (NM_001144888, intron 7 of 13) intron (NM_001144888, intron 7 of 13) 24387 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr4-449 chr4 7485112 7485356 + 26.6 0.000 intron (NM_020777, intron 2 of 26) intron (NM_020777, intron 2 of 26) 25206 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA chr5-214 chr5 138338046 138338290 + 26.6 0.000 promoter-TSS (NM_016605) promoter-TSS (NM_016605) -98 NM_001350195 51307 Hs.54056 NM_016605 ENSG00000120709 FAM53C C5orf6 family with sequence similarity 53 member C protein-coding chr2-1373 chr2 216912247 216912491 + 26.6 0.000 Intergenic Intergenic 41597 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA chr5-301 chr5 172361705 172361949 + 26.6 0.000 intron (NM_001017995, intron 7 of 12) intron (NM_001017995, intron 7 of 12) 76230 NR_130933 100288254 Hs.531911 NM_001007542 LOC100288254 - uncharacterized LOC100288254 ncRNA chr10-1239 chr10 97475953 97476197 + 26.6 0.000 intron (NM_001289403, intron 7 of 29) intron (NM_001289403, intron 7 of 29) 22347 NM_022362 64210 Hs.500721 NM_022362 ENSG00000155229 MMS19 CIAO4|MET18|MMS19L|hMMS19 MMS19 homolog, cytosolic iron-sulfur assembly component protein-coding chr5-66 chr5 111224076 111224320 + 26.6 0.000 promoter-TSS (NM_001323377) promoter-TSS (NM_001323377) -186 NM_001323376 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding chr13-209 chr13 44272899 44273143 + 26.6 0.000 Intergenic Intergenic -76821 NR_107046 102465876 NR_107046 ENSG00000276319 MIR8079 hsa-mir-8079 microRNA 8079 ncRNA chr13-353 chr13 97231761 97232005 + 26.6 0.000 intron (NM_144778, intron 1 of 8) intron (NM_144778, intron 1 of 8) 9550 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr17-1030 chr17 68952625 68952869 + 26.6 0.000 intron (NM_001288985, intron 1 of 39) intron (NM_001288985, intron 1 of 39) 2645 NM_001288985 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding chr2-1910 chr2 206790613 206790857 + 26.6 0.000 intron (NM_001136193, intron 11 of 11) intron (NM_001136193, intron 11 of 11) -7427 NR_036077 100422993 NR_036077 ENSG00000283469 MIR3130-1 MIR3130-3|mir-3130-1 microRNA 3130-1 ncRNA chr7-255 chr7 140609754 140609998 + 26.6 0.000 intron (NM_001318053, intron 1 of 13) HY1|scRNA|scRNA -7334 NR_134477 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr4-312 chr4 9151849 9152093 + 26.6 0.000 Intergenic L2c|LINE|L2 -21202 NM_001358418 100287045 NM_001358418 ENSG00000229924 FAM90A26 FAM90A26P family with sequence similarity 90 member A26 protein-coding KI270729.1-6 KI270729.1 4544 4788 + 26.6 0.000 NA NA NA NA chr16-127 chr16 58396038 58396282 + 26.6 0.000 intron (NM_001126129, intron 2 of 3) SVA_D|Retroposon|SVA 3689 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr19-994 chr19 44992445 44992689 + 26.6 0.000 intron (NM_001282175, intron 13 of 13) intron (NM_001282175, intron 13 of 13) -8897 NM_006509 5971 Hs.654402 NM_006509 ENSG00000104856 RELB I-REL|IMD53|IREL|REL-B RELB proto-oncogene, NF-kB subunit protein-coding chr1-1800 chr1 95023730 95023974 + 26.6 0.000 intron (NM_144988, intron 3 of 3) intron (NM_144988, intron 3 of 3) -37744 NR_132786 101928098 Hs.730090 NR_132786 ENSG00000230427 LOC101928098 - uncharacterized LOC101928098 ncRNA chr14-423 chr14 68949395 68949639 + 26.6 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 29785 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr19-636 chr19 41225945 41226189 + 26.6 0.000 promoter-TSS (NM_001278599) promoter-TSS (NM_001278599) -688 NM_001278599 558 Hs.590970 NM_001699 ENSG00000167601 AXL ARK|JTK11|Tyro7|UFO AXL receptor tyrosine kinase protein-coding chr22-271 chr22 43826576 43826820 + 26.6 0.000 intron (NM_014351, intron 6 of 6) intron (NM_014351, intron 6 of 6) -14393 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr1-386 chr1 108746623 108746867 + 26.6 0.000 promoter-TSS (NM_007269) promoter-TSS (NM_007269) 71 NM_007269 6814 Hs.530436 NM_007269 ENSG00000116266 STXBP3 MUNC18-3|MUNC18C|PSP|UNC-18C syntaxin binding protein 3 protein-coding chr11-981 chr11 33867540 33867784 + 26.6 0.000 intron (NM_001142315, intron 2 of 3) intron (NM_001142315, intron 2 of 3) 2216 NM_001142315 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr21-5 chr21 8228609 8228853 + 26.6 0.000 TTS (NR_038958) TTS (NR_038958) 14843 NR_003287 100008589 NR_003287 RNA28SN5 RN28S1|RNA28S5 RNA, 28S ribosomal N5 rRNA chr1-569 chr1 222546880 222547124 + 26.6 0.000 intron (NM_024746, intron 1 of 8) intron (NM_024746, intron 1 of 8) 1102 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr15-369 chr15 50996748 50996992 + 26.6 0.000 intron (NM_001252127, intron 17 of 20) intron (NM_001252127, intron 17 of 20) -40618 NR_146310 109729174 NR_146310 ENSG00000259240 MIR4713HG - MIR4713 host gene ncRNA chr8-365 chr8 143971961 143972205 + 26.6 0.000 intron (NM_000445, intron 2 of 32) intron (NM_000445, intron 2 of 32) 1446 NM_201378 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr5-389 chr5 140114564 140114808 + 26.6 0.000 exon (NM_005859, exon 1 of 1) exon (NM_005859, exon 1 of 1) 577 NM_005859 5813 Hs.443121 NM_005859 ENSG00000185129 PURA MRD31|PUR-ALPHA|PUR1|PURALPHA purine rich element binding protein A protein-coding chr4-421 chr4 77695786 77696030 + 26.6 0.000 Intergenic Intergenic 123156 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chrX-110 chrX 16123318 16123562 + 26.6 0.000 promoter-TSS (NM_005314) promoter-TSS (NM_005314) -125 NM_005314 2925 Hs.567282 NM_005314 ENSG00000126010 GRPR BB2|BB2R gastrin releasing peptide receptor protein-coding chr12-436 chr12 104361643 104361887 + 26.6 0.000 Intergenic MER66A|LTR|ERV1 58026 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr14-69 chr14 105352624 105352868 + 26.6 0.000 intron (NM_015197, intron 3 of 23) intron (NM_015197, intron 3 of 23) -37169 NM_001242786 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr5-394 chr5 150320188 150320432 + 26.6 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -17405 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr13-95 chr13 98173361 98173605 + 26.6 0.000 intron (NM_005766, intron 1 of 26) Charlie19a|DNA|hAT-Charlie 3786 NM_178861 140432 Hs.296045 NM_178861 ENSG00000139797 RNF113B RNF161|ZNF183L1|bA10G5.1 ring finger protein 113B protein-coding chr1-567 chr1 203480580 203480824 + 26.6 0.000 intron (NM_002725, intron 1 of 2) intron (NM_002725, intron 1 of 2) 4896 NM_002725 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr2-470 chr2 207334582 207334826 + 26.6 0.000 Intergenic Intergenic -65280 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA chr19-305 chr19 36687392 36687636 + 26.6 0.000 promoter-TSS (NM_001300979) promoter-TSS (NM_001300979) -65 NR_110708 101927621 Hs.125653 NR_110707 ENSG00000225975 LINC01534 - long intergenic non-protein coding RNA 1534 ncRNA chr3-786 chr3 150106906 150107150 + 26.6 0.000 intron (NR_136187, intron 1 of 2) intron (NR_136187, intron 1 of 2) 10585 NR_136187 105374313 Hs.151216 NR_136187 LOC105374313 - uncharacterized LOC105374313 ncRNA chr4-347 chr4 140238437 140238681 + 26.6 0.000 Intergenic Intergenic -18749 NM_032547 60592 Hs.480815 NM_032547 ENSG00000153130 SCOC HRIHFB2072|SCOCO|UNC-69 short coiled-coil protein protein-coding chr5-672 chr5 102866486 102866730 + 26.6 0.000 intron (NR_157231, intron 2 of 14) intron (NR_157231, intron 2 of 14) 785 NM_001177306 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr12-270 chr12 46356872 46357116 + 26.6 0.000 Intergenic AluJb|SINE|Alu 15779 NM_018976 54407 Hs.221847 NM_018976 ENSG00000134294 SLC38A2 ATA2|PRO1068|SAT2|SNAT2 solute carrier family 38 member 2 protein-coding chr12-74 chr12 105084414 105084658 + 26.6 0.000 promoter-TSS (NM_001034173) promoter-TSS (NM_001034173) -78 NR_027752 160428 Hs.42572 NM_001034173 ENSG00000136010 ALDH1L2 mtFDH aldehyde dehydrogenase 1 family member L2 protein-coding chr8-319 chr8 142526071 142526315 + 26.6 0.000 intron (NM_001702, intron 23 of 30) intron (NM_001702, intron 23 of 30) 76544 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr1-1021 chr1 40374292 40374536 + 26.6 0.000 promoter-TSS (NM_001198978) promoter-TSS (NM_001198978) -219 NM_001198978 64744 Hs.15200 NM_022733 ENSG00000084070 SMAP2 SMAP1L small ArfGAP2 protein-coding chr3-823 chr3 26641877 26642121 + 26.6 0.000 intron (NM_001317810, intron 2 of 2) Charlie1b|DNA|hAT-Charlie 17332 NM_001317810 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr6-651 chr6 6986210 6986454 + 26.5 0.000 Intergenic Intergenic -121411 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr11-671 chr11 67506025 67506269 + 26.5 0.000 promoter-TSS (NM_001130848) promoter-TSS (NM_001130848) -784 NM_004910 9600 Hs.372295 NM_004910 ENSG00000110697 PITPNM1 DRES9|NIR2|PITPNM|RDGB|RDGB1|RDGBA|RDGBA1|Rd9 phosphatidylinositol transfer protein membrane associated 1 protein-coding chr7-856 chr7 129221996 129222240 + 26.5 0.000 Intergenic Intergenic -2912 NM_001130720 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr1-1034 chr1 54052283 54052527 + 26.5 0.000 intron (NM_001305051, intron 1 of 7) intron (NM_001305051, intron 1 of 7) 799 NM_001305043 9528 Hs.118947 NM_004872 ENSG00000116209 TMEM59 C1orf8|DCF1|HSPC001|PRO195|UNQ169 transmembrane protein 59 protein-coding chr4-107 chr4 173370659 173370903 + 26.5 0.000 promoter-TSS (NM_003864) promoter-TSS (NM_003864) -173 NM_003864 8819 Hs.591715 NM_003864 ENSG00000164105 SAP30 - Sin3A associated protein 30 protein-coding chr11-924 chr11 69648821 69649065 + 26.5 0.000 intron (NM_053056, intron 4 of 4) intron (NM_053056, intron 4 of 4) 7838 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr8-807 chr8 17596677 17596921 + 26.5 0.000 intron (NM_006207, intron 3 of 6) intron (NM_006207, intron 3 of 6) 20366 NM_006207 5157 Hs.458573 NM_006207 ENSG00000104213 PDGFRL PDGRL|PRLTS platelet derived growth factor receptor like protein-coding chr2-614 chr2 68806462 68806706 + 26.5 0.000 intron (NM_014882, intron 3 of 9) MER44B|DNA|TcMar-Tigger 31674 NM_014882 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding chr20-400 chr20 8161882 8162126 + 26.5 0.000 intron (NM_182734, intron 2 of 32) intron (NM_182734, intron 2 of 32) 29738 NM_182734 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding chr10-535 chr10 98235861 98236105 + 26.5 0.000 intron (NM_001256620, intron 7 of 8) intron (NM_001256620, intron 7 of 8) 32211 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr10-237 chr10 7787960 7788204 + 26.5 0.000 promoter-TSS (NR_045609) promoter-TSS (NR_045609) -22 NM_005174 509 Hs.271135 NM_005174 ENSG00000165629 ATP5F1C ATP5C|ATP5C1|ATP5CL1 ATP synthase F1 subunit gamma protein-coding chr5-167 chr5 137470731 137470975 + 26.5 0.000 intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 28473 NM_004598 6695 Hs.596136 NM_004598 ENSG00000152377 SPOCK1 SPOCK|TESTICAN|TIC1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 protein-coding chr3-59 chr3 196695149 196695393 + 26.5 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 16979 NM_032898 84984 Hs.282800 NM_032898 ENSG00000174007 CEP19 C3orf34|MOSPGF centrosomal protein 19 protein-coding chrX-132 chrX 148871499 148871743 + 26.5 0.000 intron (NM_001170628, intron 4 of 17) intron (NM_001170628, intron 4 of 17) 152530 NM_001170628 2334 Hs.496911 NM_002025 ENSG00000155966 AFF2 FMR2|FMR2P|FRAXE|MRX2|OX19 AF4/FMR2 family member 2 protein-coding chr14-304 chr14 99879398 99879642 + 26.5 0.000 intron (NM_004434, intron 4 of 21) intron (NM_004434, intron 4 of 21) 86107 NM_004434 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr3-962 chr3 49890460 49890704 + 26.5 0.000 exon (NM_002447, exon 18 of 20) exon (NM_002447, exon 18 of 20) 13055 NM_001318913 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr7-1426 chr7 138876457 138876701 + 26.5 0.000 intron (NM_020910, intron 12 of 19) intron (NM_020910, intron 12 of 19) -78383 NM_130840 50617 Hs.98967 NM_020632 ENSG00000105929 ATP6V0A4 A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2 ATPase H+ transporting V0 subunit a4 protein-coding chr2-249 chr2 68252529 68252773 + 26.5 0.000 promoter-TSS (NM_000945) promoter-TSS (NM_000945) -119 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr10-435 chr10 103451252 103451496 + 26.5 0.000 intron (NM_015916, intron 1 of 3) intron (NM_015916, intron 1 of 3) 996 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr2-474 chr2 217919859 217920103 + 26.5 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) 255 NM_001308023 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr7-507 chr7 43986996 43987240 + 26.5 0.000 intron (NR_003655, intron 6 of 15) AluSx1|SINE|Alu -13772 NM_175064 285955 Hs.645483 NM_175064 ENSG00000136206 SPDYE1 Ringo1|SPDYB2L2|SPDYE|WBSCR19 speedy/RINGO cell cycle regulator family member E1 protein-coding chr3-411 chr3 134485832 134486076 + 26.5 0.000 promoter-TSS (NM_001242374) promoter-TSS (NM_001242374) 31 NM_015391 25847 Hs.106909 NM_015391 ENSG00000129055 ANAPC13 APC13|SWM1 anaphase promoting complex subunit 13 protein-coding chr1-883 chr1 179365594 179365838 + 26.5 0.000 promoter-TSS (NM_144696) promoter-TSS (NM_144696) -255 NM_144696 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding chr11-515 chr11 67367970 67368214 + 26.5 0.000 intron (NM_001166212, intron 1 of 2) intron (NM_001166212, intron 1 of 2) 5506 NM_013246 23529 Hs.502977 NM_013246 ENSG00000175505 CLCF1 BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6 cardiotrophin like cytokine factor 1 protein-coding chr10-421 chr10 79157401 79157645 + 26.5 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 88557 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr6-406 chr6 81562257 81562501 + 26.5 0.000 Intergenic Intergenic 190302 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding chr14-415 chr14 59333788 59334032 + 26.5 0.000 intron (NM_001270520, intron 15 of 24) intron (NM_001270520, intron 15 of 24) 70469 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding chr5-198 chr5 6633495 6633739 + 26.5 0.000 promoter-TSS (NR_037947) promoter-TSS (NR_037947) 177 NR_136739 6715 Hs.552 NM_001047 ENSG00000145545 SRD5A1 S5AR 1 steroid 5 alpha-reductase 1 protein-coding chr19-442 chr19 3080377 3080621 + 26.5 0.000 Intergenic Intergenic -13863 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr11-1061 chr11 8756197 8756441 + 26.5 0.000 intron (NM_005418, intron 4 of 22) intron (NM_005418, intron 4 of 22) -12459 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr17-472 chr17 9842493 9842737 + 26.5 0.000 exon (NM_004246, exon 4 of 13) exon (NM_004246, exon 4 of 13) 16691 NM_004246 9340 Hs.248202 NM_004246 ENSG00000065325 GLP2R - glucagon like peptide 2 receptor protein-coding chr9-794 chr9 107158369 107158613 + 26.5 0.000 Intergenic Intergenic -55503 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr16-164 chr16 47461059 47461303 + 26.5 0.000 promoter-TSS (NM_000293) promoter-TSS (NM_000293) 93 NM_001305002 81533 Hs.42217 NM_030790 ENSG00000129636 ITFG1 2310047C21Rik|CDA08|LNKN-1|TIP integrin alpha FG-GAP repeat containing 1 protein-coding chr17-365 chr17 82338991 82339235 + 26.5 0.000 Intergenic MER41G|LTR|ERV1 -5347 NM_003004 6398 Hs.558009 NM_003004 ENSG00000141574 SECTM1 K12|SECTM secreted and transmembrane 1 protein-coding chr8-441 chr8 37822435 37822679 + 26.5 0.000 intron (NM_032777, intron 2 of 18) L1MB7|LINE|L1 25674 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr10-249 chr10 95865240 95865484 + 26.5 0.000 intron (NM_001320916, intron 9 of 9) intron (NM_001320916, intron 9 of 9) -42603 NM_001130446 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr19-545 chr19 14475763 14476007 + 26.5 0.000 promoter-TSS (NM_000955) promoter-TSS (NM_000955) -531 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr1-665 chr1 220879150 220879394 + 26.5 0.000 promoter-TSS (NM_021958) promoter-TSS (NM_021958) -171 NM_021958 3142 Hs.74870 NM_021958 ENSG00000136630 HLX HB24|HLX1 H2.0 like homeobox protein-coding chr3-207 chr3 128845823 128846067 + 26.5 0.000 promoter-TSS (NR_162138) promoter-TSS (NR_162138) -863 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr9-315 chr9 134135810 134136054 + 26.5 0.000 promoter-TSS (NM_017588) promoter-TSS (NM_017588) -150 NM_017588 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr9-350 chr9 22009342 22009586 + 26.5 0.000 promoter-TSS (NM_078487) promoter-TSS (NM_078487) -151 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr2-319 chr2 96739986 96740230 + 26.5 0.000 promoter-TSS (NM_001142292) promoter-TSS (NM_001142292) -16 NM_001322352 81562 Hs.655743 NM_030805 ENSG00000114988 LMAN2L MRT52|VIPL lectin, mannose binding 2 like protein-coding chr4-316 chr4 40672958 40673202 + 26.5 0.000 Intergenic Intergenic -42486 NM_001371114 chr10-382 chr10 132665957 132666201 + 26.5 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -15196 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr12-776 chr12 121992207 121992451 + 26.5 0.000 intron (NM_144668, intron 19 of 21) intron (NM_144668, intron 19 of 21) -29555 NM_020993 605 Hs.530970 NM_020993 ENSG00000110987 BCL7A BCL7 BAF chromatin remodeling complex subunit BCL7A protein-coding chr7-983 chr7 78395609 78395853 + 26.5 0.000 intron (NM_001301128, intron 6 of 20) intron (NM_001301128, intron 6 of 20) 48489 NR_003680 399670 Hs.568045 NR_003680 ENSG00000231322 RPL13AP17 RPL13A_6_816 ribosomal protein L13a pseudogene 17 pseudo chr18-45 chr18 9017129 9017373 + 26.3 0.000 Intergenic Intergenic -85448 NM_021074 4729 Hs.464572 NM_021074 ENSG00000178127 NDUFV2 CI-24k|MC1DN7 NADH:ubiquinone oxidoreductase core subunit V2 protein-coding chr11-774 chr11 128553033 128553277 + 26.3 0.000 intron (NM_001143820, intron 3 of 9) intron (NM_001143820, intron 3 of 9) 27013 NR_120581 101929517 Hs.562320 NR_120581 ENSG00000254588 ETS1-AS1 pancEts-1 ETS1 antisense RNA 1 ncRNA chr4-803 chr4 13597928 13598172 + 26.3 0.000 intron (NM_148894, intron 10 of 25) L2c|LINE|L2 29675 NM_148894 259282 Hs.744935 NM_148894 ENSG00000038219 BOD1L1 BOD1L|FAM44A biorientation of chromosomes in cell division 1 like 1 protein-coding chr3-229 chr3 48446607 48446851 + 26.3 0.000 promoter-TSS (NM_032166) promoter-TSS (NM_032166) -8 NM_130384 84126 Hs.694840 NM_032166 ENSG00000164053 ATRIP - ATR interacting protein protein-coding chr7-400 chr7 130913385 130913629 + 26.3 0.000 promoter-TSS (NR_034120) promoter-TSS (NR_034120) 43 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr2-577 chr2 240998260 240998504 + 26.3 0.000 promoter-TSS (NM_001080437) promoter-TSS (NM_001080437) -236 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr2-966 chr2 99698286 99698530 + 26.3 0.000 intron (NM_001025108, intron 10 of 23) intron (NM_001025108, intron 10 of 23) -208391 NR_135653 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr19-609 chr19 55634917 55635161 + 26.3 0.000 Intergenic Intergenic -5963 NM_207115 51157 Hs.631551 NM_016202 ENSG00000213015 ZNF580 - zinc finger protein 580 protein-coding chr3-204 chr3 97821951 97822195 + 26.3 0.000 promoter-TSS (NM_153605) promoter-TSS (NM_153605) 62 NM_153605 131544 Hs.733378 NM_153605 ENSG00000080200 CRYBG3 DKFZp667G2110|vlAKAP crystallin beta-gamma domain containing 3 protein-coding chr6-544 chr6 118713147 118713391 + 26.3 0.000 Intergenic Intergenic -3194 NM_001178035 387119 Hs.656959 NM_206921 ENSG00000111860 CEP85L C6orf204|NY-BR-15|bA57K17.2 centrosomal protein 85 like protein-coding chr3-673 chr3 136786630 136786874 + 26.3 0.000 Intergenic Intergenic -32267 NM_001097599 80723 Hs.477692 NM_025246 ENSG00000168917 SLC35G2 TMEM22 solute carrier family 35 member G2 protein-coding chr9-355 chr9 72384061 72384305 + 26.3 0.000 Intergenic Intergenic -18975 NM_006007 7763 Hs.406096 NM_006007 ENSG00000107372 ZFAND5 ZA20D2|ZFAND5A|ZNF216 zinc finger AN1-type containing 5 protein-coding chr1-365 chr1 201983092 201983336 + 26.3 0.000 promoter-TSS (NM_001319182) promoter-TSS (NM_001319182) -147 NM_001319182 6051 Hs.497391 NM_020216 ENSG00000176393 RNPEP AP-B|APB arginyl aminopeptidase protein-coding chr20-28 chr20 31573011 31573255 + 26.3 0.000 intron (NR_046853, intron 1 of 2) CpG 130 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr15-150 chr15 40081738 40081982 + 26.3 0.000 Intergenic Intergenic 24226 NM_001003942 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr1-1810 chr1 113041920 113042164 + 26.3 0.000 intron (NR_103777, intron 2 of 2) intron (NR_103777, intron 2 of 2) 31060 NR_103777 100996251 Hs.382067 NR_103777 ENSG00000238198 LRIG2-DT - LRIG2 divergent transcript ncRNA chr21-198 chr21 15293316 15293560 + 26.3 0.000 Intergenic Intergenic -228438 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr11-224 chr11 62542842 62543086 + 26.3 0.000 intron (NM_024060, intron 1 of 5) intron (NM_024060, intron 1 of 5) 2700 NM_001346446 79026 Hs.502756 NM_001620 ENSG00000124942 AHNAK AHNAKRS|PM227 AHNAK nucleoprotein protein-coding chr8-387 chr8 32780245 32780489 + 26.3 0.000 Intergenic Intergenic 58532 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr3-289 chr3 129428592 129428836 + 26.3 0.000 promoter-TSS (NM_207307) promoter-TSS (NM_207307) -78 NM_207307 90288 Hs.652347 NM_207307 ENSG00000172771 EFCAB12 C3orf25 EF-hand calcium binding domain 12 protein-coding chrX-394 chrX 119489855 119490099 + 26.3 0.000 Intergenic MIRb|SINE|MIR -20857 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr19-273 chr19 2425256 2425500 + 26.3 0.000 TTS (NM_012458) TTS (NM_012458) 2208 NM_012458 26517 Hs.75056 NM_012458 ENSG00000099800 TIMM13 TIM13|TIM13B|TIMM13A|TIMM13B|ppv1 translocase of inner mitochondrial membrane 13 protein-coding chr1-826 chr1 32400979 32401223 + 26.3 0.000 Intergenic Intergenic -6660 NR_125352 55108 Hs.353454 NM_018045 ENSG00000160058 BSDC1 - BSD domain containing 1 protein-coding chr1-1275 chr1 12437048 12437292 + 26.3 0.000 intron (NM_015378, intron 65 of 69) intron (NM_015378, intron 65 of 69) -70076 NR_003022 677882 Hs.658450 NR_003022 ENSG00000266079 SNORA59B ACA59 small nucleolar RNA, H/ACA box 59B snoRNA chr11-624 chr11 70135575 70135819 + 26.3 0.000 intron (NM_018043, intron 11 of 25) intron (NM_018043, intron 11 of 25) 50287 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr13-207 chr13 40402875 40403119 + 26.3 0.000 intron (NR_024506, intron 5 of 5) intron (NR_024506, intron 5 of 5) 78009 NR_024507 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA chr20-77 chr20 63699120 63699364 + 26.3 0.000 TTS (NR_037882) TTS (NR_037882) 2590 NM_003823 8771 Hs.434878 NM_003823 ENSG00000243509 TNFRSF6B DCR3|DJ583P15.1.1|M68|M68E|TR6 TNF receptor superfamily member 6b protein-coding chr3-792 chr3 162492792 162493036 + 26.3 0.000 Intergenic MER110-int|LTR|ERV1 810387 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA chr16-228 chr16 70660121 70660365 + 26.3 0.000 TTS (NM_138383) TTS (NM_138383) 25810 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr4-527 chr4 74583335 74583579 + 26.3 0.000 Intergenic MER5A|DNA|hAT-Charlie 138321 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding chr11-373 chr11 112074066 112074310 + 26.3 0.000 promoter-TSS (NM_001082969) promoter-TSS (NM_001082969) -17 NM_001082619 120379 Hs.420662 NM_138789 ENSG00000150773 PIH1D2 - PIH1 domain containing 2 protein-coding chr17-116 chr17 56833934 56834178 + 26.3 0.000 promoter-TSS (NM_003647) promoter-TSS (NM_003647) -95 NM_003647 8526 Hs.239514 NM_003647 ENSG00000153933 DGKE AHUS7|DAGK5|DAGK6|DGK|NPHS7 diacylglycerol kinase epsilon protein-coding chr14-193 chr14 36320424 36320668 + 26.3 0.000 promoter-TSS (NM_016586) promoter-TSS (NM_016586) 91 NM_016586 51562 Hs.368647 NM_016586 ENSG00000151332 MBIP - MAP3K12 binding inhibitory protein 1 protein-coding chr10-279 chr10 125662153 125662397 + 26.3 0.000 intron (NM_001128202, intron 1 of 3) intron (NM_001128202, intron 1 of 3) 20888 NM_001128202 387718 Hs.148259 NM_001128202 ENSG00000175018 TEX36 C10orf122|bA383C5.1 testis expressed 36 protein-coding chr15-191 chr15 84948365 84948609 + 26.3 0.000 intron (NM_001321722, intron 18 of 18) intron (NM_001321722, intron 18 of 18) -31980 NM_001243137 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr6-383 chr6 27091912 27092156 + 26.3 0.000 Intergenic Intergenic 40762 NM_021058 8970 Hs.591807 NM_021058 ENSG00000124635 HIST1H2BJ H2B/r|H2BFR|H2BJ histone cluster 1 H2B family member j protein-coding chr1-458 chr1 11012716 11012960 + 26.3 0.000 intron (NM_007375, intron 1 of 5) CpG 216 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding chr6-933 chr6 26257539 26257783 + 26.3 0.000 Intergenic Intergenic 6010 NM_003524 8345 Hs.247815 NM_003524 ENSG00000275713 HIST1H2BH H2B/j|H2BFJ histone cluster 1 H2B family member h protein-coding chr8-707 chr8 142824365 142824609 + 26.3 0.000 Intergenic Intergenic -10314 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr12-500 chr12 2804913 2805157 + 26.3 0.000 TTS (NR_146318) TTS (NR_146318) -7633 NM_018463 55846 Hs.239 NM_018463 ENSG00000111203 ITFG2 FGGAP1|MDS028 integrin alpha FG-GAP repeat containing 2 protein-coding chr7-753 chr7 82036594 82036838 + 26.3 0.000 intron (NM_000722, intron 11 of 38) L2b|LINE|L2 27539 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA chr18-91 chr18 25351888 25352132 + 26.3 0.000 5' UTR (NM_015461, exon 1 of 8) 5' UTR (NM_015461, exon 1 of 8) 156 NM_001308225 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-477 chr2 232480265 232480509 + 26.3 0.000 intron (NM_004826, intron 17 of 17) intron (NM_004826, intron 17 of 17) 7447 NM_001290787 9427 Hs.26880 NM_004826 ENSG00000171551 ECEL1 DA5D|DINE|ECEX|XCE endothelin converting enzyme like 1 protein-coding chr4-597 chr4 56641639 56641883 + 26.3 0.000 Intergenic Intergenic 14761 NM_001145459 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr10-826 chr10 44569593 44569837 + 26.3 0.000 Intergenic Intergenic -184618 NM_199168 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr9-341 chr9 130445579 130445823 + 26.3 0.000 intron (NM_054012, intron 1 of 14) intron (NM_054012, intron 1 of 14) 740 NM_054012 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr5-369 chr5 54310614 54310858 + 26.3 0.000 promoter-TSS (NM_019087) promoter-TSS (NM_019087) -163 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr1-1915 chr1 209039319 209039563 + 26.3 0.000 Intergenic Intergenic 66987 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr5-1031 chr5 53701699 53701943 + 26.3 0.000 Intergenic L1PA6|LINE|L1 117861 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr4-70 chr4 39638943 39639187 + 26.3 0.000 promoter-TSS (NM_001317896) promoter-TSS (NM_001317896) -200 NM_001317896 201895 Hs.205952 NM_174921 ENSG00000163683 SMIM14 C4orf34 small integral membrane protein 14 protein-coding chr11-750 chr11 72225041 72225285 + 26.3 0.000 exon (NM_001567, exon 1 of 28) exon (NM_001567, exon 1 of 28) 396 NM_001567 3636 Hs.523875 NM_001567 ENSG00000165458 INPPL1 OPSMD|SHIP2 inositol polyphosphate phosphatase like 1 protein-coding chr1-1364 chr1 88175628 88175872 + 26.3 0.000 Intergenic Intergenic -508394 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr6-385 chr6 27890763 27891007 + 26.3 0.000 promoter-TSS (NM_003535) promoter-TSS (NM_003535) -93 NM_003535 8356 Hs.484990 NM_003535 ENSG00000197153 HIST1H3J H3/j|H3FJ histone cluster 1 H3 family member j protein-coding chr11-244 chr11 73983051 73983295 + 26.3 0.000 promoter-TSS (NM_003355) promoter-TSS (NM_003355) -329 NM_003355 7351 Hs.80658 NM_003355 ENSG00000175567 UCP2 BMIQ4|SLC25A8|UCPH uncoupling protein 2 protein-coding chr7-716 chr7 39709676 39709920 + 26.3 0.000 Intergenic MIR|SINE|MIR -23770 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA chr20-111 chr20 2652385 2652629 + 26.3 0.000 promoter-TSS (NR_027700) promoter-TSS (NR_027700) -125 NR_145428 10528 Hs.376064 NM_006392 ENSG00000101361 NOP56 NOL5A|SCA36 NOP56 ribonucleoprotein protein-coding chr1-1110 chr1 230509708 230509952 + 26.3 0.000 Intergenic LOR1a|LTR|ERV1 -83498 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr10-196 chr10 13299589 13299833 + 26.3 0.000 promoter-TSS (NM_001323084) promoter-TSS (NM_001323084) 35 NM_001037537 5264 Hs.498732 NM_006214 ENSG00000107537 PHYH LN1|LNAP1|PAHX|PHYH1|RD phytanoyl-CoA 2-hydroxylase protein-coding chr11-1119 chr11 63537094 63537338 + 26.2 0.000 intron (NM_004585, intron 1 of 3) intron (NM_004585, intron 1 of 3) 408 NM_004585 5920 Hs.17466 NM_004585 ENSG00000133321 PLAAT4 HRASLS4|HRSL4|PLA1/2-3|PLAAT-4|RARRES3|RIG1|TIG3 phospholipase A and acyltransferase 4 protein-coding chr10-327 chr10 78931734 78931978 + 26.2 0.000 Intergenic Intergenic 135592 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr4-1091 chr4 155005510 155005754 + 26.2 0.000 Intergenic Intergenic -203004 NM_000910 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding GL383527.1-1 GL383527.1 131325 131569 + 26.2 0.000 NA NA NA NA chr22-236 chr22 26887671 26887915 + 26.2 0.000 Intergenic L2c|LINE|L2 -15499 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA chr10-838 chr10 58641138 58641382 + 26.2 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -73755 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr1-1224 chr1 214518448 214518692 + 26.2 0.000 intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 33032 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding chr8-316 chr8 140060877 140061121 + 26.2 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 39536 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr13-92 chr13 60163904 60164148 + 26.2 0.000 promoter-TSS (NM_001042517) promoter-TSS (NM_001042517) -41 NM_001258369 81624 Hs.283127 NM_030932 ENSG00000139734 DIAPH3 AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2 diaphanous related formin 3 protein-coding chr16-385 chr16 11328650 11328894 + 26.2 0.000 Intergenic Intergenic 16440 NR_135174 105371083 Hs.737495 NR_135174 ENSG00000263080 LOC105371083 - uncharacterized LOC105371083 ncRNA chr19-486 chr19 6273758 6274002 + 26.2 0.000 intron (NM_005934, intron 1 of 11) intron (NM_005934, intron 1 of 11) 6095 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr19-499 chr19 51688868 51689112 + 26.2 0.000 promoter-TSS (NM_001316994) promoter-TSS (NM_001316994) -444 NM_001316994 147650 Hs.467174 NM_207324 ENSG00000182310 SPACA6 LET7EH|LINC00085|NCRNA00085|SPACA6P sperm acrosome associated 6 protein-coding chr8-490 chr8 41371518 41371762 + 26.2 0.000 Intergenic L1MEi|LINE|L1 -55015 NR_145746 109616980 NR_145746 ENSG00000238936 SNORD65B - small nucleolar RNA, C/D box 65B snoRNA chr15-70 chr15 45023106 45023350 + 26.2 0.000 promoter-TSS (NR_034039) promoter-TSS (NR_034039) 33 NR_034039 6652 Hs.878 NM_003104 ENSG00000140263 SORD HEL-S-95n|RDH|SDH|SORD1|XDH sorbitol dehydrogenase protein-coding chr13-120 chr13 97391041 97391285 + 26.2 0.000 intron (NM_144778, intron 8 of 8) intron (NM_144778, intron 8 of 8) -43006 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr9-699 chr9 128120180 128120424 + 26.2 0.000 TTS (NM_025072) TTS (NM_025072) -1568 NR_033374 100289019 Hs.693796 NR_033374 SLC25A25-AS1 - SLC25A25 antisense RNA 1 ncRNA chr8-506 chr8 86703451 86703695 + 26.2 0.000 intron (NM_019098, intron 3 of 17) intron (NM_019098, intron 3 of 17) 40102 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr11-1067 chr11 12581952 12582196 + 26.2 0.000 Intergenic LTR16D|LTR|ERVL -92347 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding chr12-621 chr12 19431825 19432069 + 26.2 0.000 Intergenic Intergenic -7545 NM_153207 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr1-947 chr1 100188790 100189034 + 26.2 0.000 3' UTR (NM_001918, exon 11 of 11) 3' UTR (NM_001918, exon 11 of 11) -10639 NM_001256387 127495 Hs.44277 NM_144620 ENSG00000122477 LRRC39 - leucine rich repeat containing 39 protein-coding chr6-685 chr6 45327975 45328219 + 26.2 0.000 promoter-TSS (NM_001024630) promoter-TSS (NM_001024630) -220 NM_001015051 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr1-933 chr1 46616709 46616953 + 26.2 0.000 promoter-TSS (NM_201403) promoter-TSS (NM_201403) 60 NM_201403 148932 Hs.632401 NM_145279 ENSG00000142961 MOB3C MOB1E|MOBKL2C MOB kinase activator 3C protein-coding chr11-604 chr11 33452962 33453206 + 26.2 0.000 intron (NM_012194, intron 1 of 20) intron (NM_012194, intron 1 of 20) 76976 NM_012194 25758 Hs.502266 NM_012194 ENSG00000110427 KIAA1549L C11orf41|C11orf69|G2 KIAA1549 like protein-coding chr10-1158 chr10 57696806 57697050 + 26.2 0.000 Intergenic Intergenic -392369 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA chr4-235 chr4 30719537 30719781 + 26.2 0.000 promoter-TSS (NM_032456) promoter-TSS (NM_032456) -710 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chr2-660 chr2 234679728 234679972 + 26.2 0.000 Intergenic Intergenic -2818 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr17-658 chr17 77434185 77434429 + 26.2 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -16442 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr1-586 chr1 28581676 28581920 + 26.2 0.000 promoter-TSS (NR_003035) promoter-TSS (NR_003035) 75 NR_146384 85028 Hs.632377 NR_024127 ENSG00000197989 SNHG12 ASLNC04080|C1orf79|LINC00100|NCRNA00100|PNAS-123 small nucleolar RNA host gene 12 ncRNA chr2-1665 chr2 36701355 36701599 + 26.2 0.000 intron (NM_001177969, intron 1 of 14) intron (NM_001177969, intron 1 of 14) 4770 NM_001177970 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr1-1282 chr1 18890703 18890947 + 26.2 0.000 promoter-TSS (NM_001161504) promoter-TSS (NM_001161504) 66 NM_001161504 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr6-357 chr6 76792279 76792523 + 26.2 0.000 Intergenic Intergenic -198778 NR_149101 105377860 Hs.544542 NR_149101 ENSG00000236635 LINC02540 - long intergenic non-protein coding RNA 2540 ncRNA chr4-350 chr4 147981393 147981637 + 26.2 0.000 intron (NM_024605, intron 18 of 22) L1PA17|LINE|L1 198920 NR_039962 100616246 NR_039962 ENSG00000264274 MIR4799 - microRNA 4799 ncRNA chr8-249 chr8 141026820 141027064 + 26.2 0.000 Intergenic Intergenic -24863 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr10-688 chr10 123744033 123744277 + 26.2 0.000 Intergenic Intergenic 77800 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr10-426 chr10 84337188 84337432 + 26.2 0.000 intron (NM_018999, intron 1 of 10) L2a|LINE|L2 8721 NM_001351292 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding chr6-730 chr6 134174760 134175004 + 26.2 0.000 promoter-TSS (NM_005627) promoter-TSS (NM_005627) -16 NM_005627 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr7-699 chr7 11319534 11319778 + 26.2 0.000 Intergenic LTR16E2|LTR|ERVL 345784 NR_033436 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr11-583 chr11 108559990 108560234 + 26.2 0.000 intron (NM_015065, intron 1 of 5) intron (NM_015065, intron 1 of 5) -7883 NM_001144763 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr3-246 chr3 20575044 20575288 + 26.2 0.000 Intergenic Intergenic 232698 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA chr10-591 chr10 91672298 91672542 + 26.2 0.000 Intergenic Intergenic -39349 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr1-618 chr1 231776232 231776476 + 26.2 0.000 intron (NM_001164547, intron 6 of 7) intron (NM_001164547, intron 6 of 7) 42163 NR_002227 27184 Hs.720568 NR_002227 DISC2 DISC1-AS1|DISC1OS|NCRNA00015 disrupted in schizophrenia 2 ncRNA chr22-249 chr22 41621108 41621352 + 26.2 0.000 promoter-TSS (NM_001469) promoter-TSS (NM_001469) -65 NM_001288977 2547 Hs.292493 NM_001469 ENSG00000196419 XRCC6 CTC75|CTCBF|G22P1|KU70|ML8|TLAA X-ray repair cross complementing 6 protein-coding chr10-458 chr10 27620955 27621199 + 26.2 0.000 Intergenic Intergenic 116773 NR_046172 22931 Hs.406799 NM_021252 ENSG00000099246 RAB18 RAB18LI1|WARBM3 RAB18, member RAS oncogene family protein-coding chr6-283 chr6 90098061 90098305 + 26.2 0.000 intron (NM_021813, intron 4 of 8) intron (NM_021813, intron 4 of 8) 198660 NM_021813 60468 Hs.269764 NM_021813 ENSG00000112182 BACH2 BTBD25|IMD60 BTB domain and CNC homolog 2 protein-coding chr16-292 chr16 1182347 1182591 + 26.2 0.000 intron (NM_001005407, intron 2 of 33) intron (NM_001005407, intron 2 of 33) 29228 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr4-328 chr4 81136350 81136594 + 26.2 0.000 intron (NM_006259, intron 13 of 18) intron (NM_006259, intron 13 of 18) 17685 NM_001282482 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr5-247 chr5 154368080 154368324 + 26.2 0.000 intron (NM_198321, intron 4 of 11) MER5A|DNA|hAT-Charlie 21096 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr17-1310 chr17 42337500 42337744 + 26.2 0.000 intron (NM_001369512, intron 7 of 23) intron (NM_001369512, intron 7 of 23) 49566 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr8-575 chr8 116504606 116504850 + 26.2 0.000 Intergenic Intergenic -147372 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA chr14-239 chr14 64338273 64338517 + 26.2 0.000 non-coding (NR_073496, exon 1 of 8) non-coding (NR_073496, exon 1 of 8) 155 NM_001291723 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding chr16-521 chr16 31443112 31443356 + 26.2 0.000 promoter-TSS (NM_001136509) promoter-TSS (NM_001136509) -74 NM_001353381 283933 Hs.722243 NM_001136509 ENSG00000176723 ZNF843 - zinc finger protein 843 protein-coding chr10-367 chr10 60611428 60611672 + 26.2 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) -38594 NM_001204404 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10-909 chr10 103044703 103044947 + 26.2 0.000 intron (NM_199076, intron 1 of 6) intron (NM_199076, intron 1 of 6) 108996 NM_001351174 22978 Hs.97439 NM_012229 ENSG00000076685 NT5C2 GMP|NT5B|PNT5|SPG45|SPG65|cN-II 5'-nucleotidase, cytosolic II protein-coding chr2-626 chr2 128179152 128179396 + 26.2 0.000 intron (NR_027671, intron 34 of 40) intron (NR_027671, intron 34 of 40) 88074 NM_020120 56886 Hs.743306 NM_020120 ENSG00000136731 UGGT1 HUGT1|UGCGL1|UGT1 UDP-glucose glycoprotein glucosyltransferase 1 protein-coding chr10-752 chr10 103969871 103970115 + 26.2 0.000 intron (NM_001304743, intron 1 of 17) MIR|SINE|MIR 2853 NM_001304743 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr3-459 chr3 179181179 179181423 + 26.2 0.000 intron (NM_006218, intron 1 of 20) intron (NM_006218, intron 1 of 20) 32944 NM_006218 5290 Hs.553498 NM_006218 ENSG00000121879 PIK3CA CLAPO|CLOVE|CWS5|MCAP|MCM|MCMTC|PI3K|PI3K-alpha|p110-alpha phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha protein-coding chr3-417 chr3 168249744 168249988 + 26.2 0.000 non-coding (NR_021485, exon 1 of 16) non-coding (NR_021485, exon 1 of 16) 344 NR_021485 93556 Hs.478158 NR_021485 EGFEM1P C3orf50|NCRNA00259 EGF like and EMI domain containing 1, pseudogene pseudo chr18-209 chr18 70337136 70337380 + 26.2 0.000 non-coding (NR_146458, exon 1 of 2) non-coding (NR_146458, exon 1 of 2) 922 NR_146458 102724895 NR_146458 LIVAR lnc18q22.2 liver cell viability associated lncRNA ncRNA chr3-744 chr3 64539363 64539607 + 26.2 0.000 intron (NM_001318781, intron 35 of 38) intron (NM_001318781, intron 35 of 38) -21861 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr10-379 chr10 123997457 123997701 + 26.2 0.000 Intergenic Tigger13a|DNA|TcMar-Tigger 94827 NM_014863 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr2-1306 chr2 130797778 130798022 + 26.2 0.000 Intergenic CpG -39014 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding chr1-787 chr1 202118912 202119156 + 26.2 0.000 Intergenic Intergenic -3883 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr3-681 chr3 169228035 169228279 + 26.2 0.000 intron (NM_001205194, intron 1 of 15) intron (NM_001205194, intron 1 of 15) -80686 NM_001366474 2122 Hs.656395 NM_004991 ENSG00000085276 MECOM AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 MDS1 and EVI1 complex locus protein-coding chr4-176 chr4 112637053 112637297 + 26.0 0.000 promoter-TSS (NM_015454) promoter-TSS (NM_015454) 32 NM_016648 51574 Hs.713663 NM_015454 ENSG00000174720 LARP7 ALAZS|HDCMA18P|PIP7S La ribonucleoprotein domain family member 7 protein-coding chr15-401 chr15 83323413 83323657 + 26.0 0.000 Intergenic Intergenic -38871 NM_001717 646 Hs.459153 NM_001717 ENSG00000169594 BNC1 BNC|BSN1|HsT19447 basonuclin 1 protein-coding chr6-711 chr6 108113546 108113790 + 26.0 0.000 Intergenic Intergenic -9965 NR_145458 100287366 Hs.221513 NR_145458 ENSG00000225174 OSTM1-AS1 - OSTM1 antisense RNA 1 ncRNA chrX-112 chrX 48737167 48737411 + 26.0 0.000 Intergenic CpG -24458 NM_001080489 392465 Hs.437539 NM_001080489 ENSG00000171433 GLOD5 - glyoxalase domain containing 5 protein-coding chr10-350 chr10 297269 297513 + 26.0 0.000 intron (NM_014974, intron 32 of 36) L1MA5A|LINE|L1 117397 NM_001202468 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr16-271 chr16 89923297 89923541 + 26.0 0.000 promoter-TSS (NM_006086) promoter-TSS (NM_006086) 77 NM_006086 10381 Hs.511743 NM_006086 ENSG00000258947 TUBB3 CDCBM|CDCBM1|CFEOM3|CFEOM3A|FEOM3|TUBB4|beta-4 tubulin beta 3 class III protein-coding chr12-410 chr12 50057376 50057620 + 26.0 0.000 promoter-TSS (NR_046389) promoter-TSS (NR_046389) -98 NR_046389 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr2-1461 chr2 43577156 43577400 + 26.0 0.000 intron (NM_001083953, intron 9 of 37) intron (NM_001083953, intron 9 of 37) 18696 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr20-159 chr20 18288242 18288486 + 26.0 0.000 promoter-TSS (NM_003434) promoter-TSS (NM_003434) 136 NM_001283005 7692 Hs.472221 NM_003434 ENSG00000125846 ZNF133 ZNF150|pHZ-13|pHZ-66 zinc finger protein 133 protein-coding chr16-248 chr16 85162417 85162661 + 26.0 0.000 Intergenic Intergenic 25389 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr1-1010 chr1 24909522 24909766 + 26.0 0.000 intron (NM_001320672, intron 5 of 6) intron (NM_001320672, intron 5 of 6) 9772 NR_106789 102465437 NR_106789 ENSG00000278034 MIR6731 hsa-mir-6731 microRNA 6731 ncRNA chr12-459 chr12 1373816 1374060 + 26.0 0.000 intron (NR_027948, intron 16 of 19) intron (NR_027948, intron 16 of 19) -126553 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr1-503 chr1 151047723 151047967 + 26.0 0.000 promoter-TSS (NM_017860) promoter-TSS (NM_017860) 94 NM_017860 54964 Hs.549171 NM_017860 ENSG00000143443 C1orf56 MENT chromosome 1 open reading frame 56 protein-coding chr12-248 chr12 92298163 92298407 + 26.0 0.000 Intergenic Intergenic -123246 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr7-439 chr7 151600039 151600283 + 26.0 0.000 intron (NM_016203, intron 5 of 15) intron (NM_016203, intron 5 of 15) 32097 NM_024429 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr1-123 chr1 212432796 212433040 + 26.0 0.000 promoter-TSS (NR_026598) promoter-TSS (NR_026598) -2 NR_026598 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr20-213 chr20 45778953 45779197 + 26.0 0.000 intron (NM_080614, intron 4 of 6) MIRc|SINE|MIR 12808 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding chr6-1014 chr6 75524380 75524624 + 26.0 0.000 Intergenic Intergenic -30702 NM_001300866 27145 Hs.201488 NM_015687 ENSG00000118407 FILIP1 FILIP filamin A interacting protein 1 protein-coding chrX-543 chrX 130192383 130192627 + 26.0 0.000 Intergenic Intergenic 20543 NM_004794 9363 Hs.654356 NM_004794 ENSG00000134594 RAB33A RabS10 RAB33A, member RAS oncogene family protein-coding chr3-427 chr3 187263334 187263578 + 26.0 0.000 intron (NR_033519, intron 1 of 9) intron (NR_033519, intron 1 of 9) -27816 NR_135551 101929130 NR_135551 ENSG00000283175 LOC101929130 - uncharacterized LOC101929130 ncRNA chr15-235 chr15 72685830 72686074 + 26.0 0.000 promoter-TSS (NM_001320665) promoter-TSS (NM_001320665) -227 NR_045565 585 Hs.208681 NM_033028 ENSG00000140463 BBS4 - Bardet-Biedl syndrome 4 protein-coding chr10-632 chr10 43396496 43396740 + 26.0 0.000 5' UTR (NM_001098208, exon 1 of 3) 5' UTR (NM_001098208, exon 1 of 3) 213 NM_001098208 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr10-620 chr10 17348725 17348969 + 26.0 0.000 intron (NM_001004470, intron 4 of 7) intron (NM_001004470, intron 4 of 7) -38089 NR_034129 100128098 Hs.530588 NR_034129 ENSG00000204832 ST8SIA6-AS1 - ST8SIA6 antisense RNA 1 ncRNA chr2-525 chr2 216478286 216478530 + 26.0 0.000 intron (NM_001127207, intron 17 of 17) intron (NM_001127207, intron 17 of 17) -20436 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr1-1152 chr1 32695412 32695656 + 26.0 0.000 exon (NM_001161708, exon 2 of 4) exon (NM_001161708, exon 2 of 4) 7236 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr16-218 chr16 770078 770322 + 26.0 0.000 promoter-TSS (NR_030384) promoter-TSS (NR_030384) 17 NR_030384 724032 NR_030384 ENSG00000207579 MIR662 MIRN662|hsa-mir-662 microRNA 662 ncRNA chr18-236 chr18 44781962 44782206 + 26.0 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 101196 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr15-677 chr15 67701833 67702077 + 26.0 0.000 intron (NM_001206804, intron 15 of 21) MIRb|SINE|MIR -123554 NM_001365915 390598 Hs.451224 NM_001031807 ENSG00000188779 SKOR1 CORL1|FUSSEL15|LBXCOR1 SKI family transcriptional corepressor 1 protein-coding chr18-354 chr18 62791008 62791252 + 26.0 0.000 intron (NM_194449, intron 1 of 16) intron (NM_194449, intron 1 of 16) 75589 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr3-406 chr3 119498425 119498669 + 26.0 0.000 promoter-TSS (NM_016589) promoter-TSS (NM_016589) 0 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding chr16-260 chr16 67183716 67183960 + 26.0 0.000 TTS (NM_178516) TTS (NM_178516) 125 NM_001040715 653319 Hs.651201 NM_001040715 ENSG00000196123 KIAA0895L - KIAA0895 like protein-coding chr22-320 chr22 29907877 29908121 + 26.0 0.000 intron (NM_153051, intron 1 of 18) intron (NM_153051, intron 1 of 18) 24825 NM_021090 8897 Hs.474536 NM_021090 ENSG00000100330 MTMR3 FYVE-DSP1|ZFYVE10 myotubularin related protein 3 protein-coding chr17-514 chr17 71189130 71189374 + 26.0 0.000 intron (NR_104152, intron 1 of 3) intron (NR_104152, intron 1 of 3) 12927 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA chr14-561 chr14 74852983 74853227 + 26.0 0.000 TTS (NM_001080408) TTS (NM_001080408) 10729 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding chr18-119 chr18 59140192 59140436 + 26.0 0.000 intron (NM_001307941, intron 1 of 4) L3|LINE|CR1 430 NM_033280 90701 Hs.45107 NM_033280 ENSG00000166562 SEC11C SEC11L3|SPC21|SPCS4C SEC11 homolog C, signal peptidase complex subunit protein-coding chr2-741 chr2 46954961 46955205 + 26.0 0.000 intron (NM_001288951, intron 2 of 20) MIRc|SINE|MIR -13228 NM_001171508 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr5-869 chr5 14926063 14926307 + 26.0 0.000 Intergenic Intergenic -54407 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr8-142 chr8 42896109 42896353 + 26.0 0.000 promoter-TSS (NM_032410) promoter-TSS (NM_032410) 44 NR_039679 100616115 NR_039679 ENSG00000284062 MIR4469 mir-4469 microRNA 4469 ncRNA chr12-1179 chr12 93174149 93174393 + 26.0 0.000 promoter-TSS (NR_120492) promoter-TSS (NR_120492) -95 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr16-582 chr16 64440601 64440845 + 26.0 0.000 Intergenic Intergenic 681340 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr7-577 chr7 80942282 80942526 + 26.0 0.000 Intergenic Intergenic -20015 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding chr11-1255 chr11 3786894 3787138 + 26.0 0.000 intron (NR_157590, intron 1 of 31) MIRc|SINE|MIR 10530 NR_157591 4928 Hs.524750 NM_005387 ENSG00000110713 NUP98 ADIR2|NUP196|NUP96 nucleoporin 98 protein-coding chr10-390 chr10 19629719 19629963 + 26.0 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 98709 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr2-1288 chr2 105337268 105337512 + 26.0 0.000 promoter-TSS (NM_024093) promoter-TSS (NM_024093) -150 NM_001286537 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr19-282 chr19 16572412 16572656 + 26.0 0.000 promoter-TSS (NM_024881) promoter-TSS (NM_024881) -119 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr17-525 chr17 81129068 81129312 + 26.0 0.000 intron (NM_001080395, intron 3 of 13) intron (NM_001080395, intron 3 of 13) 2758 NM_004920 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr12-822 chr12 46677858 46678102 + 26.0 0.000 Intergenic LTR88b|LTR|Gypsy? 148017 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding chr8-179 chr8 129983837 129984081 + 26.0 0.000 intron (NM_001353245, intron 1 of 13) MER5B|DNA|hAT-Charlie 24494 NR_049826 100847051 NR_049826 ENSG00000264653 MIR5194 mir-5194 microRNA 5194 ncRNA chr10-1048 chr10 119331801 119332045 + 26.0 0.000 intron (NM_005308, intron 2 of 15) Charlie4a|DNA|hAT-Charlie -46049 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr6-197 chr6 104859713 104859957 + 26.0 0.000 promoter-TSS (NM_001350559) promoter-TSS (NM_001350559) 84 NR_146787 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr2-1366 chr2 204664749 204664993 + 26.0 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 119396 NM_057177 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chrX-58 chrX 30889399 30889643 + 26.0 0.000 promoter-TSS (NM_152787) promoter-TSS (NM_152787) -267 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr18-77 chr18 62485703 62485947 + 26.0 0.000 Intergenic Intergenic -37200 NR_126534 54877 Hs.114191 NM_017742 ENSG00000141664 ZCCHC2 C18orf49 zinc finger CCHC-type containing 2 protein-coding chr13-105 chr13 106568183 106568427 + 26.0 0.000 promoter-TSS (NM_018011) promoter-TSS (NM_018011) -168 NM_018011 55082 Hs.508644 NM_018011 ENSG00000134884 ARGLU1 - arginine and glutamate rich 1 protein-coding chr13-36 chr13 114155424 114155668 + 26.0 0.000 Intergenic Intergenic -22923 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr5-218 chr5 150378142 150378386 + 26.0 0.000 intron (NM_001008657, intron 14 of 17) intron (NM_001008657, intron 14 of 17) 20567 NM_001195141 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr11-246 chr11 102172117 102172361 + 25.9 0.000 intron (NM_001282097, intron 3 of 7) intron (NM_001282097, intron 3 of 7) 59791 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr22-543 chr22 49767568 49767812 + 25.9 0.000 Intergenic L1M3f|LINE|L1 56641 NM_001349940 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr4-996 chr4 71389670 71389914 + 25.9 0.000 intron (NM_003759, intron 3 of 22) L2a|LINE|L2 50739 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr17-718 chr17 81130885 81131129 + 25.9 0.000 intron (NM_001080395, intron 3 of 13) intron (NM_001080395, intron 3 of 13) 941 NM_004920 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr11-1093 chr11 46248742 46248986 + 25.9 0.000 Intergenic Intergenic -28798 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr11-1530 chr11 65078228 65078472 + 25.9 0.000 3' UTR (NM_080668, exon 6 of 6) 3' UTR (NM_080668, exon 6 of 6) 5690 NM_080668 113130 Hs.434886 NM_080668 ENSG00000146670 CDCA5 SORORIN cell division cycle associated 5 protein-coding chr17-641 chr17 60037204 60037448 + 25.9 0.000 Intergenic L1MD2|LINE|L1 5779 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA chrX-109 chrX 15493136 15493380 + 25.9 0.000 promoter-TSS (NM_001018109) promoter-TSS (NM_001018109) 75 NM_001018109 8544 Hs.495728 NM_003662 ENSG00000087842 PIR - pirin protein-coding chr1-865 chr1 115364580 115364824 + 25.9 0.000 intron (NR_157569, intron 1 of 1) intron (NR_157569, intron 1 of 1) -26466 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding chr8-126 chr8 20197229 20197473 + 25.9 0.000 promoter-TSS (NM_001693) promoter-TSS (NM_001693) -30 NM_001693 526 Hs.295917 NM_001693 ENSG00000147416 ATP6V1B2 ATP6B1B2|ATP6B2|DOOD|HO57|VATB|VPP3|Vma2|ZLS2 ATPase H+ transporting V1 subunit B2 protein-coding chr6-237 chr6 1325595 1325839 + 25.9 0.000 Intergenic Intergenic 13619 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr2-1021 chr2 201769078 201769322 + 25.9 0.000 intron (NM_020919, intron 1 of 33) intron (NM_020919, intron 1 of 33) 11733 NM_001135745 57679 Hs.471096 NM_020919 ENSG00000003393 ALS2 ALS2CR6|ALSJ|IAHSP|PLSJ alsin Rho guanine nucleotide exchange factor ALS2 protein-coding chr4-167 chr4 26584012 26584256 + 25.9 0.000 promoter-TSS (NM_018317) promoter-TSS (NM_018317) 50 NM_018317 55296 Hs.479403 NM_018317 ENSG00000109680 TBC1D19 - TBC1 domain family member 19 protein-coding chr6-311 chr6 45505063 45505307 + 25.9 0.000 intron (NM_001015051, intron 6 of 7) intron (NM_001015051, intron 6 of 7) 82910 NM_001278478 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding chr11-427 chr11 65117154 65117398 + 25.9 0.000 TTS (NM_003273) TTS (NM_003273) 425 NM_014205 741 Hs.121025 NM_014205 ENSG00000174276 ZNHIT2 C11orf5|FON zinc finger HIT-type containing 2 protein-coding chr2-787 chr2 172085181 172085425 + 25.9 0.000 promoter-TSS (NM_001038493) promoter-TSS (NM_001038493) -204 NM_178120 1745 Hs.407015 NM_178120 ENSG00000144355 DLX1 - distal-less homeobox 1 protein-coding chr14-108 chr14 88562973 88563217 + 25.9 0.000 promoter-TSS (NM_001326311) promoter-TSS (NM_001326311) 58 NM_001326305 79882 Hs.684046 NM_024824 ENSG00000100722 ZC3H14 MRT56|MSUT-2|NY-REN-37|SUT2|UKp68 zinc finger CCCH-type containing 14 protein-coding chr21-127 chr21 25507010 25507254 + 25.9 0.000 Intergenic Intergenic -55013 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr14-725 chr14 64344156 64344400 + 25.9 0.000 Intergenic L1MC4|LINE|L1 3333 NR_033777 441687 Hs.685242 NR_033777 TEX21P - testis expressed 21, pseudogene pseudo chr2-655 chr2 223825356 223825600 + 25.9 0.000 intron (NR_110905, intron 1 of 5) intron (NR_110905, intron 1 of 5) 12104 NM_001039569 130340 Hs.632555 NM_178814 ENSG00000152056 AP1S3 PSORS15 adaptor related protein complex 1 subunit sigma 3 protein-coding chr10-485 chr10 129993622 129993866 + 25.9 0.000 Intergenic L1MA3|LINE|L1 -29470 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr14-377 chr14 85313774 85314018 + 25.9 0.000 Intergenic L2a|LINE|L2 41964 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr11-1083 chr11 35549837 35550081 + 25.9 0.000 Intergenic Intergenic -19659 NM_001282675 25891 Hs.55044 NM_015430 ENSG00000149090 PAMR1 DKFZP586H2123|FP938|RAMP peptidase domain containing associated with muscle regeneration 1 protein-coding chr6-106 chr6 109009532 109009776 + 25.9 0.000 promoter-TSS (NM_001199934) promoter-TSS (NM_001199934) -99 NM_001199933 27244 Hs.591336 NM_014454 ENSG00000080546 SESN1 PA26|SEST1 sestrin 1 protein-coding chr5-262 chr5 43064984 43065228 + 25.9 0.000 TTS (NR_034127) TTS (NR_034127) 1865 NR_034127 100132356 Hs.726831 NM_175919 LOC100132356 - uncharacterized LOC100132356 ncRNA chr17-450 chr17 47831322 47831566 + 25.9 0.000 promoter-TSS (NM_148887) promoter-TSS (NM_148887) 97 NM_148887 124995 Hs.347535 NM_145255 ENSG00000159111 MRPL10 L10MT|MRP-L10|MRP-L8|MRPL8|RPML8 mitochondrial ribosomal protein L10 protein-coding chrX-325 chrX 113384671 113384915 + 25.9 0.000 intron (NR_110399, intron 3 of 3) MER5A|DNA|hAT-Charlie 342066 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr7-714 chr7 37208541 37208785 + 25.9 0.000 intron (NM_001206480, intron 13 of 21) intron (NM_001206480, intron 13 of 21) 145005 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr14-269 chr14 71320208 71320452 + 25.9 0.000 promoter-TSS (NM_001354287) promoter-TSS (NM_001354287) -146 NM_015556 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding chr11-771 chr11 123590475 123590719 + 25.9 0.000 intron (NM_020716, intron 3 of 19) (TCCC)n|Simple_repeat|Simple_repeat 30335 NM_001286564 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr2-646 chr2 205695415 205695659 + 25.9 0.000 intron (NM_018534, intron 1 of 15) intron (NM_018534, intron 1 of 15) 13036 NM_201266 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr12-360 chr12 11812804 11813048 + 25.9 0.000 intron (NM_001987, intron 2 of 7) intron (NM_001987, intron 2 of 7) 163072 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr2-1324 chr2 157246387 157246631 + 25.9 0.000 Intergenic Intergenic -11196 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding chr22-652 chr22 31241948 31242192 + 25.9 0.000 intron (NM_005569, intron 2 of 15) Tigger15a|DNA|TcMar-Tigger -6314 NM_001031801 3985 Hs.474596 NM_005569 ENSG00000182541 LIMK2 - LIM domain kinase 2 protein-coding chr19-683 chr19 19366837 19367081 + 25.9 0.000 Intergenic Intergenic -18844 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr4-550 chr4 133865658 133865902 + 25.9 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL 336009 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding chr6-725 chr6 130970612 130970856 + 25.9 0.000 promoter-TSS (NM_001350310) promoter-TSS (NM_001350310) -251 NM_001350313 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr12-698 chr12 121060037 121060281 + 25.9 0.000 Intergenic Intergenic -20917 NM_003733 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr16-583 chr16 64751960 64752204 + 25.9 0.000 Intergenic Intergenic 369981 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr13-169 chr13 28139072 28139316 + 25.9 0.000 promoter-TSS (NR_029383) promoter-TSS (NR_029383) -20 NR_029383 100288730 Hs.123191 NR_029383 PAN3-AS1 - PAN3 antisense RNA 1 ncRNA chr17-453 chr17 69492392 69492636 + 25.9 0.000 intron (NM_002758, intron 1 of 11) MLT1D|LTR|ERVL-MaLR -6982 NR_145982 105371880 NR_145982 LOC105371880 - uncharacterized LOC105371880 ncRNA chr15-109 chr15 40379853 40380097 + 25.9 0.000 Intergenic L2a|LINE|L2 -2746 NM_001142761 90417 Hs.525796 NM_033286 ENSG00000128944 KNSTRN C15orf23|HSD11|SKAP|TRAF4AF1 kinetochore localized astrin (SPAG5) binding protein protein-coding chr11-1480 chr11 46429854 46430098 + 25.9 0.000 intron (NM_001267782, intron 16 of 19) intron (NM_001267782, intron 16 of 19) -21831 NR_036118 100422825 NR_036118 ENSG00000283497 MIR3160-2 mir-3160-2 microRNA 3160-2 ncRNA chr22-286 chr22 38318372 38318616 + 25.9 0.000 promoter-TSS (NM_001894) promoter-TSS (NM_001894) -410 NM_001894 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr5-452 chr5 33224041 33224285 + 25.9 0.000 Intergenic Intergenic -5572 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr8-522 chr8 121574427 121574671 + 25.9 0.000 Intergenic L3|LINE|CR1 -64797 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr3-702 chr3 27311460 27311704 + 25.9 0.000 intron (NM_152534, intron 9 of 38) intron (NM_152534, intron 9 of 38) 57801 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr5-277 chr5 176537788 176538032 + 25.9 0.000 promoter-TSS (NM_014901) promoter-TSS (NM_014901) -508 NM_014901 22838 Hs.434888 NM_014901 ENSG00000146083 RNF44 - ring finger protein 44 protein-coding chr19-435 chr19 1180515 1180759 + 25.9 0.000 Intergenic Intergenic -6369 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr1-273 chr1 86396233 86396477 + 25.7 0.000 promoter-TSS (NM_001366783) promoter-TSS (NM_001366783) -13 NM_001184765 57489 Hs.149360 NM_020729 ENSG00000122417 ODF2L - outer dense fiber of sperm tails 2 like protein-coding chr11-605 chr11 33634500 33634744 + 25.7 0.000 intron (NM_012194, intron 16 of 20) intron (NM_012194, intron 16 of 20) 66118 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr20-305 chr20 63273959 63274203 + 25.7 0.000 intron (NM_001281482, intron 1 of 13) intron (NM_001281482, intron 1 of 13) 1268 NM_001281482 55738 Hs.25584 NM_018209 ENSG00000101199 ARFGAP1 ARF1GAP|HRIHFB2281 ADP ribosylation factor GTPase activating protein 1 protein-coding chr1-340 chr1 174159312 174159556 + 25.7 0.000 promoter-TSS (NR_158982) promoter-TSS (NR_158982) 20 NM_014857 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding chr8-620 chr8 32227092 32227336 + 25.7 0.000 intron (NM_013962, intron 1 of 4) intron (NM_013962, intron 1 of 4) 200996 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr3-808 chr3 195506948 195507192 + 25.7 0.000 Intergenic L1MC1|LINE|L1 36255 NM_001291504 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr5-377 chr5 78595146 78595390 + 25.7 0.000 intron (NM_005779, intron 2 of 4) intron (NM_005779, intron 2 of 4) 53504 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr10-1125 chr10 30553737 30553981 + 25.7 0.000 Intergenic MER4CL34|LTR|ERV1 75894 NM_183058 119180 Hs.522610 NM_183058 ENSG00000151033 LYZL2 LYZD2 lysozyme like 2 protein-coding chr2-1207 chr2 26330119 26330363 + 25.7 0.000 intron (NR_135916, intron 1 of 12) L1MD2|LINE|L1 -11139 NM_001145169 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr9-905 chr9 85258863 85259107 + 25.7 0.000 Intergenic Intergenic 483044 NM_001286715 23287 Hs.719980 NM_015239 ENSG00000135049 AGTPBP1 CCP1|CONDCA|NNA1 ATP/GTP binding protein 1 protein-coding chr16-485 chr16 64092292 64092536 + 25.7 0.000 Intergenic Intergenic 1029649 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr6-545 chr6 119077459 119077703 + 25.7 0.000 intron (NM_001288576, intron 1 of 15) intron (NM_001288576, intron 1 of 15) 1083 NM_024581 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr22-106 chr22 36481619 36481863 + 25.7 0.000 promoter-TSS (NM_012473) promoter-TSS (NM_012473) -101 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr5-252 chr5 177459029 177459273 + 25.7 0.000 exon (NM_001364151, exon 12 of 15) exon (NM_001364151, exon 12 of 15) 3275 NM_001364152 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr7-359 chr7 135662267 135662511 + 25.7 0.000 promoter-TSS (NM_001130929) promoter-TSS (NM_001130929) -125 NM_001130929 647087 Hs.200022 NM_001130929 ENSG00000243317 STMP1 C7orf73|PL-5283 short transmembrane mitochondrial protein 1 protein-coding chr7-1338 chr7 91267693 91267937 + 25.7 0.000 3' UTR (NM_003505, exon 1 of 1) 3' UTR (NM_003505, exon 1 of 1) 3382 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chrX-121 chrX 47361794 47362038 + 25.7 0.000 Intergenic Intergenic -8684 NM_003446 7712 Hs.89897 NM_003446 ENSG00000147117 ZNF157 HZF22 zinc finger protein 157 protein-coding chr22-429 chr22 18023597 18023841 + 25.7 0.000 intron (NM_015241, intron 1 of 31) CpG 842 NM_015241 57553 Hs.528024 NM_015241 ENSG00000243156 MICAL3 MICAL-3 microtubule associated monooxygenase, calponin and LIM domain containing 3 protein-coding chr15-437 chr15 76107736 76107980 + 25.7 0.000 intron (NM_152335, intron 1 of 10) MIR3|SINE|MIR 47873 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding chr16-389 chr16 30896219 30896463 + 25.7 0.000 promoter-TSS (NM_001142544) promoter-TSS (NM_001142544) -266 NM_001330 1489 Hs.483811 NM_001330 ENSG00000150281 CTF1 CT-1|CT1 cardiotrophin 1 protein-coding chr3-634 chr3 192566794 192567038 + 25.7 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 51894 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chr5-245 chr5 148826190 148826434 + 25.7 0.000 promoter-TSS (NM_000024) promoter-TSS (NM_000024) -281 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding chr19-777 chr19 3098245 3098489 + 25.7 0.000 intron (NM_002067, intron 1 of 6) intron (NM_002067, intron 1 of 6) 4005 NM_002067 2767 Hs.650575 NM_002067 ENSG00000088256 GNA11 FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2 G protein subunit alpha 11 protein-coding chr1-766 chr1 40967717 40967961 + 25.7 0.000 Intergenic L2a|LINE|L2 -11857 NR_125440 1503 Hs.473087 NM_001905 ENSG00000171793 CTPS1 CTPS|GATD5|IMD24 CTP synthase 1 protein-coding chr15-273 chr15 35427180 35427424 + 25.7 0.000 intron (NM_080650, intron 5 of 8) CR1_Mam|LINE|CR1 -54938 NR_037507 100500904 NR_037507 ENSG00000265102 MIR3942 - microRNA 3942 ncRNA chr10-828 chr10 45470720 45470964 + 25.7 0.000 intron (NM_001282866, intron 3 of 7) intron (NM_001282866, intron 3 of 7) -17721 NR_120674 102724323 Hs.559151 NR_120674 ENSG00000231964 LOC102724323 - uncharacterized LOC102724323 ncRNA chr17-610 chr17 39154316 39154560 + 25.7 0.000 Intergenic Intergenic -2801 NM_020405 57125 Hs.125036 NM_020405 ENSG00000161381 PLXDC1 TEM3|TEM7 plexin domain containing 1 protein-coding chr2-445 chr2 60484198 60484442 + 25.7 0.000 intron (NM_138559, intron 2 of 4) (CCT)n|Simple_repeat|Simple_repeat 69178 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr6-51 chr6 42746151 42746395 + 25.7 0.000 promoter-TSS (NM_003192) promoter-TSS (NM_003192) -170 NM_003192 6903 Hs.75064 NM_003192 ENSG00000124659 TBCC CFC tubulin folding cofactor C protein-coding chr12-641 chr12 49965370 49965614 + 25.7 0.000 3' UTR (NM_001651, exon 4 of 4) 3' UTR (NM_001651, exon 4 of 4) -2568 NR_110589 101927318 Hs.668233 NR_110589 ENSG00000257588 LOC101927318 - uncharacterized LOC101927318 ncRNA chr13-175 chr13 44906906 44907150 + 25.7 0.000 Intergenic Intergenic 82443 NM_012345 26747 Hs.525006 NM_012345 ENSG00000083635 NUFIP1 NUFIP|bA540M5.1 nuclear FMR1 interacting protein 1 protein-coding chr9-241 chr9 23826181 23826425 + 25.7 0.000 promoter-TSS (NM_001351472) promoter-TSS (NM_001351472) -63 NM_001351464 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding chr6-814 chr6 57473006 57473250 + 25.7 0.000 intron (NM_000947, intron 7 of 13) intron (NM_000947, intron 7 of 13) 82996 NR_036097 100422884 NR_036097 ENSG00000212017 MIR548U - microRNA 548u ncRNA chr22-278 chr22 20996657 20996901 + 25.7 0.000 exon (NM_006767, exon 19 of 21) exon (NM_006767, exon 19 of 21) -5143 NR_027052 439931 Hs.517430 NR_027051 ENSG00000230513 THAP7-AS1 - THAP7 antisense RNA 1 ncRNA KI270830.1-1 KI270830.1 16522 16766 + 25.7 0.000 NA NA NA NA chr3-1052 chr3 170703091 170703335 + 25.7 0.000 intron (NR_135556, intron 2 of 5) MLT1G3|LTR|ERVL-MaLR -117138 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr11-359 chr11 65577363 65577607 + 25.7 0.000 intron (NM_001099409, intron 1 of 18) intron (NM_001099409, intron 1 of 18) 1432 NM_001099409 254102 Hs.502867 NM_001099409 ENSG00000173442 EHBP1L1 - EH domain binding protein 1 like 1 protein-coding chr11-423 chr11 46675253 46675497 + 25.7 0.000 non-coding (NR_144422, exon 18 of 18) non-coding (NR_144422, exon 18 of 18) 25244 NM_004308 392 Hs.138860 NM_004308 ENSG00000175220 ARHGAP1 CDC42GAP|RHOGAP|RHOGAP1|p50rhoGAP Rho GTPase activating protein 1 protein-coding chr5-441 chr5 671600 671844 + 25.7 0.000 intron (NM_007030, intron 2 of 3) intron (NM_007030, intron 2 of 3) 21630 NM_007030 11076 Hs.481466 NM_007030 ENSG00000171368 TPPP TPPP/p25|TPPP1|p24|p25|p25alpha tubulin polymerization promoting protein protein-coding chr17-441 chr17 35088204 35088448 + 25.7 0.000 intron (NR_037713, intron 1 of 6) intron (NR_037713, intron 1 of 6) 900 NR_037713 117584 Hs.13680 NM_057178 ENSG00000092871 RFFL CARP-2|CARP2|FRING|RIFIFYLIN|RNF189|RNF34L ring finger and FYVE like domain containing E3 ubiquitin protein ligase protein-coding chr10-608 chr10 408349 408593 + 25.7 0.000 intron (NM_014974, intron 9 of 36) intron (NM_014974, intron 9 of 36) -220093 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr13-402 chr13 99043962 99044206 + 25.7 0.000 intron (NM_015296, intron 1 of 55) hAT-N1_Mam|DNA|hAT-Tip100? -28299 NM_001366676 23348 Hs.596105 NM_015296 ENSG00000088387 DOCK9 ZIZ1|ZIZIMIN1 dedicator of cytokinesis 9 protein-coding chr5-296 chr5 141507933 141508177 + 25.7 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 18814 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr1-151 chr1 16217330 16217574 + 25.7 0.000 Intergenic CpG -4800 NM_153213 128272 Hs.591532 NM_153213 ENSG00000142632 ARHGEF19 WGEF Rho guanine nucleotide exchange factor 19 protein-coding chr12-328 chr12 49636922 49637166 + 25.7 0.000 3' UTR (NM_198900, exon 25 of 25) 3' UTR (NM_198900, exon 25 of 25) 6500 NM_001363607 25766 Hs.706827 NM_012272 ENSG00000110844 PRPF40B HYPC pre-mRNA processing factor 40 homolog B protein-coding chr7-263 chr7 24757740 24757984 + 25.7 0.000 promoter-TSS (NM_001127453) promoter-TSS (NM_001127453) 77 NM_004403 1687 Hs.520708 NM_004403 ENSG00000105928 GSDME DFNA5|ICERE-1 gasdermin E protein-coding chr11-913 chr11 66161260 66161504 + 25.7 0.000 intron (NM_018026, intron 1 of 23) AluJb|SINE|Alu 91110 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr15-105 chr15 77420253 77420497 + 25.7 0.000 promoter-TSS (NM_018200) promoter-TSS (NM_018200) -271 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding chr6-670 chr6 35452370 35452614 + 25.7 0.000 5' UTR (NM_021922, exon 1 of 10) 5' UTR (NM_021922, exon 1 of 10) 131 NM_021922 2178 Hs.302003 NM_021922 ENSG00000112039 FANCE FACE|FAE FA complementation group E protein-coding chr4-939 chr4 33157159 33157403 + 25.7 0.000 Intergenic L1MA1|LINE|L1 806243 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA chr19-562 chr19 55599002 55599246 + 25.7 0.000 intron (NM_032836, intron 1 of 2) intron (NM_032836, intron 1 of 2) 393 NM_032836 84922 Hs.515617 NM_032836 ENSG00000179943 FIZ1 ZNF798 FLT3 interacting zinc finger 1 protein-coding chr5-639 chr5 173455358 173455602 + 25.7 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 108025 NR_107023 102465862 NR_107023 ENSG00000274994 MIR8056 hsa-mir-8056 microRNA 8056 ncRNA chr2-695 chr2 145023017 145023261 + 25.7 0.000 intron (NR_033870, intron 3 of 4) intron (NR_033870, intron 3 of 4) 355172 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr2-312 chr2 26346044 26346288 + 25.7 0.000 promoter-TSS (NM_001321975) promoter-TSS (NM_001321975) 23 NR_137633 85465 Hs.189073 NM_033505 ENSG00000138018 SELENOI EPT1|SELI|SEPI selenoprotein I protein-coding chr8-757 chr8 83006824 83007068 + 25.7 0.000 Intergenic Intergenic 94842 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA chr1-1061 chr1 110004110 110004354 + 25.7 0.000 5' UTR (NM_001242676, exon 1 of 17) 5' UTR (NM_001242676, exon 1 of 17) 284 NM_001242676 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr14-234 chr14 34874160 34874404 + 25.7 0.000 promoter-TSS (NR_160776) promoter-TSS (NR_160776) 91 NR_160776 112268124 Hs.509140 NR_160776 LOC112268124 - uncharacterized LOC112268124 ncRNA chr4-544 chr4 121900478 121900722 + 25.7 0.000 intron (NM_001130698, intron 9 of 11) intron (NM_001130698, intron 9 of 11) -30103 NM_018190 55212 Hs.591694 NM_018190 ENSG00000138686 BBS7 BBS2L1 Bardet-Biedl syndrome 7 protein-coding chr3-395 chr3 40457172 40457416 + 25.7 0.000 promoter-TSS (NM_001034996) promoter-TSS (NM_001034996) -45 NM_001034996 9045 Hs.446522 NM_003973 ENSG00000188846 RPL14 CAG-ISL-7|CTG-B33|L14|RL14|hRL14 ribosomal protein L14 protein-coding chr2-897 chr2 20422255 20422499 + 25.7 0.000 Intergenic Intergenic -24697 NM_004040 388 Hs.502876 NM_004040 ENSG00000143878 RHOB ARH6|ARHB|MST081|MSTP081|RHOH6 ras homolog family member B protein-coding chr5-770 chr5 96629905 96630149 + 25.7 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -32010 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr1-1170 chr1 65792713 65792957 + 25.7 0.000 promoter-TSS (NM_002600) promoter-TSS (NM_002600) -60 NM_002600 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr12-234 chr12 122400396 122400640 + 25.7 0.000 TTS (NR_045382) TTS (NR_045382) 4976 NR_045382 100507066 Hs.624253 NR_045382 CLIP1-AS1 - CLIP1 antisense RNA 1 ncRNA chr16-412 chr16 706947 707191 + 25.6 0.000 Intergenic Intergenic -1268 NM_153350 146330 Hs.513244 NM_153350 ENSG00000127585 FBXL16 C16orf22|Fbl16|c380A1.1 F-box and leucine rich repeat protein 16 protein-coding chr14-177 chr14 20682672 20682916 + 25.6 0.000 Intergenic CpG -1383 NM_001145 283 Hs.283749 NM_001145 ENSG00000214274 ANG ALS9|HEL168|RAA1|RNASE4|RNASE5 angiogenin protein-coding chr2-462 chr2 160492822 160493066 + 25.6 0.000 intron (NM_002897, intron 1 of 13) CpG 863 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding chr6-272 chr6 19472174 19472418 + 25.6 0.000 Intergenic Intergenic 22475 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA chr2-534 chr2 235660006 235660250 + 25.6 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -142207 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr19-977 chr19 34035282 34035526 + 25.6 0.000 Intergenic MIR|SINE|MIR -137100 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr2-315 chr2 61536687 61536931 + 25.6 0.000 intron (NM_003400, intron 1 of 24) intron (NM_003400, intron 1 of 24) 1547 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr6-234 chr6 151916991 151917235 + 25.6 0.000 intron (NM_001122741, intron 4 of 8) intron (NM_001122741, intron 4 of 8) 108006 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr2-421 chr2 219368784 219369028 + 25.6 0.000 Intergenic LTR16C|LTR|ERVL 18456 NM_001319118 23549 Hs.258551 NM_012100 ENSG00000123992 DNPEP ASPEP|DAP aspartyl aminopeptidase protein-coding chr13-77 chr13 77027219 77027463 + 25.6 0.000 promoter-TSS (NM_012158) promoter-TSS (NM_012158) -182 NM_012158 26224 Hs.508284 NM_012158 ENSG00000005812 FBXL3 FBL3|FBL3A|FBXL3A|IDDSFAS F-box and leucine rich repeat protein 3 protein-coding chr1-1352 chr1 67652950 67653194 + 25.6 0.000 Intergenic Intergenic -32129 NM_001924 1647 Hs.80409 NM_001924 ENSG00000116717 GADD45A DDIT1|GADD45 growth arrest and DNA damage inducible alpha protein-coding chr2-1244 chr2 58923879 58924123 + 25.6 0.000 intron (NR_033873, intron 4 of 13) intron (NR_033873, intron 4 of 13) -293707 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr7-571 chr7 70736662 70736906 + 25.6 0.000 intron (NM_015570, intron 6 of 18) intron (NM_015570, intron 6 of 18) -395360 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr10-1159 chr10 60044286 60044530 + 25.6 0.000 intron (NM_001204403, intron 42 of 43) intron (NM_001204403, intron 42 of 43) -83495 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA chr9-396 chr9 125243330 125243574 + 25.6 0.000 Intergenic Intergenic -2109 NM_005347 3309 Hs.743241 NM_005347 ENSG00000044574 HSPA5 BIP|GRP78|HEL-S-89n|MIF2 heat shock protein family A (Hsp70) member 5 protein-coding chr6-782 chr6 17886934 17887178 + 25.6 0.000 intron (NM_001105567, intron 3 of 36) MLT1I|LTR|ERVL-MaLR 100579 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr17-515 chr17 73232181 73232425 + 25.6 0.000 promoter-TSS (NM_032837) promoter-TSS (NM_032837) 91 NM_001289411 84923 Hs.741276 NM_032837 ENSG00000133193 FAM104A - family with sequence similarity 104 member A protein-coding chr20-80 chr20 45971787 45972031 + 25.6 0.000 intron (NM_022095, intron 1 of 27) CpG-17795 294 NM_022095 63925 Hs.174193 NM_022095 ENSG00000198026 ZNF335 MCPH10|NIF-1|NIF1|NIF2 zinc finger protein 335 protein-coding chr17-321 chr17 76252241 76252485 + 25.6 0.000 Intergenic Intergenic -11870 NM_001330501 114804 Hs.500643 NM_052916 ENSG00000141576 RNF157 - ring finger protein 157 protein-coding chr9-790 chr9 98075418 98075662 + 25.6 0.000 intron (NM_018946, intron 2 of 5) intron (NM_018946, intron 2 of 5) 18808 NM_018946 54187 Hs.522310 NM_018946 ENSG00000095380 NANS HEL-S-100|SAS|SEMDCG|SEMDG N-acetylneuraminate synthase protein-coding chr11-611 chr11 62665019 62665263 + 25.6 0.000 promoter-TSS (NR_104414) promoter-TSS (NR_104414) 75 NM_001286086 102288414 Hs.9061 NM_001286086 ENSG00000278615 C11orf98 C11orf48 chromosome 11 open reading frame 98 protein-coding chr14-138 chr14 81170422 81170666 + 25.6 0.000 Intergenic L1P4a|LINE|L1 32290 NR_003021 677845 Hs.693251 NR_003021 ENSG00000221303 SNORA79 ACA65|SNORA79A small nucleolar RNA, H/ACA box 79 snoRNA chr2-922 chr2 36732060 36732304 + 25.6 0.000 intron (NM_001177969, intron 3 of 14) intron (NM_001177969, intron 3 of 14) 35475 NM_001177970 5212 Hs.137415 NM_053276 ENSG00000205221 VIT VIT1 vitrin protein-coding chr6-59 chr6 19804688 19804932 + 25.6 0.000 promoter-TSS (NR_134651) promoter-TSS (NR_134651) -51 NR_134651 100506885 Hs.346489 NR_134649 ENSG00000228412 LOC100506885 - uncharacterized LOC100506885 ncRNA chr13-234 chr13 33285738 33285982 + 25.6 0.000 promoter-TSS (NM_178006) promoter-TSS (NM_178006) -105 NM_178006 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr3-772 chr3 131350108 131350352 + 25.6 0.000 3' UTR (NM_001353038, exon 19 of 19) 3' UTR (NM_001353038, exon 19 of 19) -11615 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo chr9-73 chr9 6681646 6681890 + 25.6 0.000 Intergenic Intergenic -36076 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr11-737 chr11 65275396 65275640 + 25.6 0.000 intron (NM_002689, intron 4 of 17) intron (NM_002689, intron 4 of 17) 13556 NM_002689 23649 Hs.201897 NM_002689 ENSG00000014138 POLA2 - DNA polymerase alpha 2, accessory subunit protein-coding chr13-45 chr13 43879381 43879625 + 25.6 0.000 promoter-TSS (NM_001350641) promoter-TSS (NM_001350641) 20 NM_001350617 160857 Hs.170849 NM_144974 ENSG00000151773 CCDC122 - coiled-coil domain containing 122 protein-coding chr4-109 chr4 83484972 83485216 + 25.6 0.000 promoter-TSS (NM_001345962) promoter-TSS (NM_001345962) 6 NM_001345962 84142 Hs.334772 NM_139076 ENSG00000163322 ABRAXAS1 ABRA1|CCDC98|FAM175A abraxas 1, BRCA1 A complex subunit protein-coding chr18-81 chr18 31942965 31943209 + 25.6 0.000 promoter-TSS (NM_014939) promoter-TSS (NM_014939) 41 NM_014939 22878 Hs.202001 NM_014939 ENSG00000153339 TRAPPC8 GSG1|HsT2706|KIAA1012|TRS85 trafficking protein particle complex 8 protein-coding chr1-830 chr1 39387438 39387682 + 25.6 0.000 exon (NM_012090, exon 52 of 93) exon (NM_012090, exon 52 of 93) -21513 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr14-115 chr14 73741411 73741655 + 25.6 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -17214 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr12-870 chr12 92002761 92003005 + 25.6 0.000 intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 138830 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr22-478 chr22 28345321 28345565 + 25.6 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -114426 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr16-858 chr16 75116630 75116874 + 25.6 0.000 promoter-TSS (NM_153486) promoter-TSS (NM_153486) 20 NM_153486 197257 Hs.380929 NM_153486 ENSG00000166816 LDHD DLACD|DLD lactate dehydrogenase D protein-coding chr3-817 chr3 11154669 11154913 + 25.6 0.000 intron (NM_001098212, intron 1 of 1) CpG 298 NM_001098212 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chrX-62 chrX 65035312 65035556 + 25.6 0.000 promoter-TSS (NM_001178032) promoter-TSS (NM_001178032) -693 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr12-670 chr12 80130037 80130281 + 25.6 0.000 intron (NM_001368062, intron 1 of 62) intron (NM_001368062, intron 1 of 62) 30622 NM_001368062 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr21-146 chr21 24631944 24632188 + 25.6 0.000 Intergenic ERVL-B4-int|LTR|ERVL 203326 NR_135521 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA chr12-481 chr12 103986849 103987093 + 25.6 0.000 exon (NM_003211, exon 10 of 10) exon (NM_003211, exon 10 of 10) 21099 NM_003211 6996 Hs.584809 NM_003211 ENSG00000139372 TDG hTDG thymine DNA glycosylase protein-coding chr15-311 chr15 90419886 90420130 + 25.6 0.000 intron (NM_003870, intron 2 of 37) MIR|SINE|MIR 31766 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr9-702 chr9 128252953 128253197 + 25.6 0.000 intron (NM_001288739, intron 21 of 21) intron (NM_001288739, intron 21 of 21) -8045 NR_036110 100422893 NR_036110 ENSG00000264823 MIR3154 mir-3154 microRNA 3154 ncRNA chr21-52 chr21 16194177 16194421 + 25.6 0.000 promoter-TSS (NR_027791) promoter-TSS (NR_027791) -80 NR_027791 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr7-926 chr7 28192928 28193172 + 25.6 0.000 intron (NR_034097, intron 2 of 3) MLT1J|LTR|ERVL-MaLR -12255 NM_175061 221895 Hs.368944 NM_175061 ENSG00000153814 JAZF1 TIP27|ZNF802 JAZF zinc finger 1 protein-coding chr12-201 chr12 121296975 121297219 + 25.6 0.000 promoter-TSS (NM_001270485) promoter-TSS (NM_001270485) -344 NM_172226 10645 Hs.297343 NM_006549 ENSG00000110931 CAMKK2 CAMKK|CAMKKB calcium/calmodulin dependent protein kinase kinase 2 protein-coding chr12-62 chr12 53452495 53452739 + 25.6 0.000 intron (NM_001128912, intron 1 of 14) CpG 515 NM_001128913 5094 Hs.546271 NM_005016 ENSG00000197111 PCBP2 HNRNPE2|HNRPE2|hnRNP-E2 poly(rC) binding protein 2 protein-coding chr7-185 chr7 149261815 149262059 + 25.6 0.000 promoter-TSS (NR_144366) promoter-TSS (NR_144366) -259 NM_001195220 100289678 Hs.490512 NM_001195220 ENSG00000204946 ZNF783 - zinc finger family member 783 protein-coding chr6-174 chr6 83859527 83859771 + 25.6 0.000 promoter-TSS (NM_016230) promoter-TSS (NM_016230) -40 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding chr5-760 chr5 77444519 77444763 + 25.6 0.000 intron (NM_018268, intron 8 of 12) intron (NM_018268, intron 8 of 12) 47675 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding chr17-785 chr17 48002681 48002925 + 25.6 0.000 Intergenic Plat_L3|LINE|CR1 -30079 NR_162100 113218499 NR_162100 MIR10226 - microRNA 10226 ncRNA chr16-123 chr16 84699910 84700154 + 25.6 0.000 promoter-TSS (NM_001272075) promoter-TSS (NM_001272075) 32 NR_073578 9100 Hs.136778 NM_005153 ENSG00000103194 USP10 UBPO ubiquitin specific peptidase 10 protein-coding chr10-1008 chr10 71048852 71049096 + 25.6 0.000 Intergenic MER91C|DNA|hAT-Tip100 109921 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr3-1046 chr3 160006466 160006710 + 25.6 0.000 intron (NR_108088, intron 6 of 9) intron (NR_108088, intron 6 of 9) -14061 NR_104132 730109 Hs.99333 NR_104132 LINC01100 - long intergenic non-protein coding RNA 1100 ncRNA chr8-242 chr8 116709983 116710227 + 25.6 0.000 intron (NM_003756, intron 2 of 7) intron (NM_003756, intron 2 of 7) 45718 NM_003756 8667 Hs.492599 NM_003756 ENSG00000147677 EIF3H EIF3S3|eIF3-gamma|eIF3-p40 eukaryotic translation initiation factor 3 subunit H protein-coding chr3-843 chr3 58306223 58306467 + 25.6 0.000 promoter-TSS (NM_001348712) promoter-TSS (NM_001348712) 100 NM_001348714 109703458 Hs.446320 NM_001348712 ENSG00000255154 HTD2 - hydroxyacyl-thioester dehydratase type 2 protein-coding chr8-438 chr8 24649269 24649513 + 25.6 0.000 Intergenic Intergenic -100773 NR_125808 101929294 Hs.637673 NR_125808 LOC101929294 - uncharacterized LOC101929294 ncRNA chr1-717 chr1 108963262 108963506 + 25.6 0.000 5' UTR (NM_015127, exon 1 of 12) 5' UTR (NM_015127, exon 1 of 12) 115 NM_015127 23155 Hs.658489 NM_015127 ENSG00000121940 CLCC1 MCLC chloride channel CLIC like 1 protein-coding chr1-1674 chr1 19620801 19621045 + 25.6 0.000 intron (NR_033758, intron 2 of 4) intron (NR_033758, intron 2 of 4) 13116 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr2-795 chr2 213189376 213189620 + 25.6 0.000 Intergenic Intergenic -21788 NR_146974 105373863 Hs.258045 NR_146974 LINC01953 - long intergenic non-protein coding RNA 1953 ncRNA chr2-803 chr2 226835940 226836184 + 25.6 0.000 promoter-TSS (NM_001167608) promoter-TSS (NM_001167608) 8 NM_001349071 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding chr11-939 chr11 94794876 94795120 + 25.6 0.000 intron (NM_001301007, intron 1 of 11) intron (NM_001301007, intron 1 of 11) 26642 NM_130847 154810 Hs.503594 NM_130847 ENSG00000166025 AMOTL1 JEAP angiomotin like 1 protein-coding chr3-530 chr3 57397546 57397790 + 25.6 0.000 intron (NM_001366028, intron 43 of 73) intron (NM_001366028, intron 43 of 73) -104983 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding chr1-867 chr1 150293752 150293996 + 25.6 0.000 promoter-TSS (NM_018997) promoter-TSS (NM_018997) 32 NM_031901 54460 Hs.405880 NM_018997 ENSG00000266472 MRPS21 MDS016|MRP-S21|RPMS21 mitochondrial ribosomal protein S21 protein-coding chr3-612 chr3 129485733 129485977 + 25.4 0.000 intron (NM_052990, intron 12 of 26) intron (NM_052990, intron 12 of 26) -42784 NM_000539 6010 Hs.247565 NM_000539 ENSG00000163914 RHO CSNBAD1|OPN2|RP4 rhodopsin protein-coding chr2-1037 chr2 231386534 231386778 + 25.4 0.000 Intergenic Intergenic -9054 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr17-565 chr17 77333122 77333366 + 25.4 0.000 intron (NM_006640, intron 1 of 10) L1ME2z|LINE|L1 13729 NM_006640 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr5-451 chr5 27242010 27242254 + 25.4 0.000 Intergenic L1PA16|LINE|L1 -203546 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding chr7-701 chr7 16915596 16915840 + 25.4 0.000 Intergenic MER70B|LTR|ERVL -33735 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr6-245 chr6 33697056 33697300 + 25.4 0.000 promoter-TSS (NR_037498) promoter-TSS (NR_037498) -950 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA chr5-577 chr5 40399467 40399711 + 25.4 0.000 Intergenic Intergenic -280326 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr5-846 chr5 173880629 173880873 + 25.4 0.000 Intergenic Intergenic -7598 NM_001308189 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr2-85 chr2 207711517 207711761 + 25.4 0.000 promoter-TSS (NM_001142300) promoter-TSS (NM_001142300) 99 NM_001142300 151195 Hs.471234 NM_152523 ENSG00000163249 CCNYL1 - cyclin Y like 1 protein-coding chr10-176 chr10 51074358 51074602 + 25.4 0.000 promoter-TSS (NM_006258) promoter-TSS (NM_006258) -7 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding chr1-477 chr1 32291874 32292118 + 25.4 0.000 promoter-TSS (NM_004964) promoter-TSS (NM_004964) -87 NM_004964 3065 Hs.88556 NM_004964 ENSG00000116478 HDAC1 GON-10|HD1|KDAC1|RPD3|RPD3L1 histone deacetylase 1 protein-coding chr22-264 chr22 33000671 33000915 + 25.4 0.000 intron (NM_003490, intron 2 of 13) intron (NM_003490, intron 2 of 13) 6028 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding chr7-421 chr7 73886610 73886854 + 25.4 0.000 Intergenic Intergenic 25573 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr10-1293 chr10 118669652 118669896 + 25.4 0.000 Intergenic Intergenic -74126 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr14-338 chr14 95156310 95156554 + 25.4 0.000 intron (NM_030621, intron 1 of 28) intron (NM_030621, intron 1 of 28) 990 NM_177438 23405 Hs.87889 NM_030621 ENSG00000100697 DICER1 DCR1|Dicer|Dicer1e|GLOW|HERNA|K12H4.8-LIKE|MNG1|RMSE2 dicer 1, ribonuclease III protein-coding chr5-161 chr5 41925093 41925337 + 25.4 0.000 promoter-TSS (NM_033484) promoter-TSS (NM_033484) -37 NM_001297437 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding chr12-375 chr12 109111086 109111330 + 25.4 0.000 TTS (NM_080911) TTS (NM_080911) -5379 NM_001093 32 Hs.234898 NM_001093 ENSG00000076555 ACACB ACC2|ACCB|HACC275 acetyl-CoA carboxylase beta protein-coding chr3-887 chr3 161349764 161350008 + 25.4 0.000 intron (NM_001320679, intron 2 of 3) intron (NM_001320679, intron 2 of 3) 22197 NM_001040100 165679 Hs.369104 NM_145035 ENSG00000196542 SPTSSB ADMP|C3orf57|SSSPTB serine palmitoyltransferase small subunit B protein-coding chr15-130 chr15 73951301 73951545 + 25.4 0.000 intron (NM_005576, intron 6 of 6) intron (NM_005576, intron 6 of 6) -23175 NR_040069 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr22-208 chr22 37559993 37560237 + 25.4 0.000 promoter-TSS (NM_152243) promoter-TSS (NM_152243) -365 NM_152243 11135 Hs.225356 NM_152243 ENSG00000128283 CDC42EP1 BORG5|CEP1|MSE55 CDC42 effector protein 1 protein-coding chr8-39 chr8 142699931 142700175 + 25.4 0.000 promoter-TSS (NM_001160354) promoter-TSS (NM_001160354) -58 NM_017527 54742 Hs.69517 NM_017527 ENSG00000160886 LY6K CT97|HSJ001348|URLC10|ly-6K lymphocyte antigen 6 family member K protein-coding chr12-339 chr12 101280004 101280248 + 25.4 0.000 promoter-TSS (NM_014503) promoter-TSS (NM_014503) 21 NM_014503 27340 Hs.295732 NM_014503 ENSG00000120800 UTP20 1A6/DRIM|DRIM UTP20 small subunit processome component protein-coding chr1-640 chr1 39489823 39490067 + 25.4 0.000 Intergenic Intergenic -1691 NM_181809 353500 Hs.472497 NM_181809 ENSG00000183682 BMP8A - bone morphogenetic protein 8a protein-coding chr1-694 chr1 26889971 26890215 + 25.4 0.000 TTS (NM_022078) TTS (NM_022078) 190 NM_018066 54707 Hs.14333 NM_018066 ENSG00000142751 GPN2 ATPBD1B GPN-loop GTPase 2 protein-coding chr2-567 chr2 186130204 186130448 + 25.4 0.000 Intergenic Intergenic -44009 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr17-1075 chr17 81556155 81556399 + 25.4 0.000 TTS (NM_017921) TTS (NM_017921) -3924 NM_025161 80233 Hs.313905 NM_025161 ENSG00000185504 FAAP100 C17orf70 FA core complex associated protein 100 protein-coding chr6-522 chr6 53524443 53524687 + 25.4 0.000 intron (NM_001498, intron 1 of 15) intron (NM_001498, intron 1 of 15) 20536 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr8-562 chr8 42856940 42857184 + 25.4 0.000 intron (NR_027668, intron 5 of 5) intron (NR_027668, intron 5 of 5) -13731 NM_199003 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding chr12-617 chr12 11508839 11509083 + 25.4 0.000 Intergenic MER39|LTR|ERV1 -22283 NR_148969 440084 Hs.121321 NR_148969 LOC440084 - uncharacterized LOC440084 ncRNA chr1-2025 chr1 38835218 38835462 + 25.4 0.000 Intergenic Intergenic 24432 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr19-713 chr19 49017894 49018138 + 25.4 0.000 promoter-TSS (NM_000894) promoter-TSS (NM_000894) -926 NM_000894 3972 Hs.154704 NM_000894 ENSG00000104826 LHB CGB4|HH23|LSH-B|LSH-beta luteinizing hormone beta polypeptide protein-coding chr19-620 chr19 4236607 4236851 + 25.4 0.000 intron (NM_005755, intron 4 of 4) intron (NM_005755, intron 4 of 4) 7206 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr7-420 chr7 56092894 56093138 + 25.4 0.000 promoter-TSS (NM_006213) promoter-TSS (NM_006213) -20 NM_006213 5260 Hs.730821 NM_006213 ENSG00000164776 PHKG1 PHKG phosphorylase kinase catalytic subunit gamma 1 protein-coding chr1-1322 chr1 39214165 39214409 + 25.4 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 130120 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr6-954 chr6 35982433 35982677 + 25.4 0.000 intron (NM_138718, intron 5 of 17) intron (NM_138718, intron 5 of 17) 41945 NM_138718 116369 Hs.435836 NM_052961 ENSG00000112053 SLC26A8 SPGF3|TAT1 solute carrier family 26 member 8 protein-coding chr1-1348 chr1 61157456 61157700 + 25.4 0.000 intron (NM_001134673, intron 2 of 10) intron (NM_001134673, intron 2 of 10) 75017 NM_001134673 4774 Hs.740757 NM_005595 ENSG00000162599 NFIA BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L nuclear factor I A protein-coding chr7-1055 chr7 152050825 152051069 + 25.4 0.000 intron (NM_001371468, intron 2 of 12) L1MA3|LINE|L1 -24090 NM_001371474 chr7-505 chr7 35694906 35695150 + 25.4 0.000 promoter-TSS (NR_136255) promoter-TSS (NR_136255) 107 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding chr11-356 chr11 62601867 62602111 + 25.4 0.000 promoter-TSS (NM_004739) promoter-TSS (NM_004739) -124 NM_004739 9219 Hs.173043 NM_004739 ENSG00000149480 MTA2 MTA1L1|PID metastasis associated 1 family member 2 protein-coding chr4-998 chr4 74284230 74284474 + 25.4 0.000 intron (NM_001144978, intron 7 of 7) Tigger6b|DNA|TcMar-Tigger -24118 NM_001270993 255324 Hs.401237 NM_001013442 ENSG00000182585 EPGN ALGV3072|EPG|PRO9904 epithelial mitogen protein-coding chr20-152 chr20 63846499 63846743 + 25.4 0.000 Intergenic Intergenic -14592 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr2-330 chr2 240921480 240921724 + 25.4 0.000 intron (NM_001351305, intron 3 of 31) intron (NM_001351305, intron 3 of 31) 15266 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr13-107 chr13 113357502 113357746 + 25.4 0.000 intron (NR_046541, intron 2 of 2) intron (NR_046541, intron 2 of 2) 5951 NR_046541 100874068 Hs.661837 NR_046541 GRTP1-AS1 - GRTP1 antisense RNA 1 ncRNA chr6-555 chr6 134673520 134673764 + 25.4 0.000 Intergenic Intergenic -133637 NR_125855 101928304 Hs.555076 NR_125855 LOC101928304 - uncharacterized LOC101928304 ncRNA chr20-132 chr20 62926461 62926705 + 25.4 0.000 promoter-TSS (NM_001193369) promoter-TSS (NM_001193369) -32 NM_080796 11083 Hs.517172 NM_022105 ENSG00000101191 DIDO1 BYE1|C20orf158|DATF-1|DATF1|DIDO2|DIDO3|DIO-1|DIO1|dJ885L7.8 death inducer-obliterator 1 protein-coding chr22-313 chr22 18092221 18092465 + 25.4 0.000 3' UTR (NM_001127649, exon 5 of 5) 3' UTR (NM_001127649, exon 5 of 5) 14353 NM_001127649 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr6-371 chr6 5969292 5969536 + 25.4 0.000 Intergenic MIRb|SINE|MIR 34630 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding chrX-209 chrX 73263000 73263244 + 25.4 0.000 Intergenic HERVI-int|LTR|ERV1 -48271 NM_021963 4674 Hs.66180 NM_021963 ENSG00000186462 NAP1L2 BPX nucleosome assembly protein 1 like 2 protein-coding chr2-1659 chr2 32330194 32330438 + 25.4 0.000 Intergenic Intergenic -26712 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr5-791 chr5 135935001 135935245 + 25.4 0.000 intron (NR_152421, intron 2 of 5) intron (NR_152421, intron 2 of 5) 4826 NR_152421 26223 Hs.591275 NM_012159 FBXL21P FBL3B|FBXL21|FBXL3B|FBXL3P|Fbl21 F-box and leucine rich repeat protein 21, pseudogene pseudo chr6-259 chr6 130178771 130179015 + 25.4 0.000 intron (NM_001277185, intron 6 of 10) intron (NM_001277185, intron 6 of 10) 36992 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding chr10-1222 chr10 90884692 90884936 + 25.4 0.000 intron (NM_006413, intron 5 of 10) intron (NM_006413, intron 5 of 10) 12840 NM_001104546 10556 Hs.139120 NM_006413 ENSG00000148688 RPP30 TSG15 ribonuclease P/MRP subunit p30 protein-coding chr1-1692 chr1 25737104 25737348 + 25.4 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) -62967 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr2-1698 chr2 50777387 50777631 + 25.4 0.000 intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -81247 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA chr5-461 chr5 62412506 62412750 + 25.4 0.000 promoter-TSS (NM_016338) promoter-TSS (NM_016338) -118 NM_016338 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding chr2-790 chr2 191172110 191172354 + 25.4 0.000 Intergenic Intergenic -20636 NM_001243835 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding chr21-27 chr21 33324790 33325034 + 25.4 0.000 promoter-TSS (NM_000629) promoter-TSS (NM_000629) -58 NM_000629 3454 Hs.529400 NM_000629 ENSG00000142166 IFNAR1 AVP|IFN-alpha-REC|IFNAR|IFNBR|IFRC interferon alpha and beta receptor subunit 1 protein-coding chr5-386 chr5 134289567 134289811 + 25.4 0.000 Intergenic Intergenic -63616 NM_002715 5515 Hs.105818 NM_002715 ENSG00000113575 PPP2CA NEDLBA|PP2Ac|PP2CA|PP2Calpha|RP-C protein phosphatase 2 catalytic subunit alpha protein-coding chr12-222 chr12 49264922 49265166 + 25.4 0.000 promoter-TSS (NM_032704) promoter-TSS (NM_032704) -38 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr8-159 chr8 42843250 42843494 + 25.4 0.000 promoter-TSS (NM_199003) promoter-TSS (NM_199003) -41 NM_199003 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding chr5-233 chr5 81750970 81751214 + 25.4 0.000 5' UTR (NM_001256732, exon 1 of 17) 5' UTR (NM_001256732, exon 1 of 17) 161 NM_001256735 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr3-791 chr3 159077898 159078142 + 25.4 0.000 intron (NM_001197113, intron 1 of 10) intron (NM_001197113, intron 1 of 10) 8701 NM_001042706 654502 Hs.570685 NM_001042705 ENSG00000214216 IQCJ - IQ motif containing J protein-coding chr2-1503 chr2 112749773 112750017 + 25.4 0.000 intron (NR_130712, intron 6 of 9) LTR50|LTR|ERVL 14714 NR_130712 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding chr12-430 chr12 91779058 91779302 + 25.4 0.000 Intergenic Intergenic 362533 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr1-656 chr1 154937165 154937409 + 25.4 0.000 promoter-TSS (NM_001323011) promoter-TSS (NM_001323011) -568 NM_001323011 10654 Hs.30954 NM_006556 ENSG00000163344 PMVK HUMPMKI|PMK|PMKA|PMKASE|POROK1 phosphomevalonate kinase protein-coding chr17-608 chr17 38900820 38901064 + 25.3 0.000 intron (NR_073384, intron 5 of 7) intron (NR_073384, intron 5 of 7) -14037 NR_106837 102465467 NR_106837 ENSG00000277057 MIR6779 hsa-mir-6779 microRNA 6779 ncRNA chr10-461 chr10 30776349 30776593 + 25.3 0.000 Intergenic Intergenic 53252 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr2-1073 chr2 28395444 28395688 + 25.3 0.000 promoter-TSS (NR_103831) promoter-TSS (NR_103831) -894 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr8-173 chr8 54135044 54135288 + 25.3 0.000 promoter-TSS (NM_014175) promoter-TSS (NM_014175) -75 NM_014175 29088 Hs.18349 NM_014175 ENSG00000137547 MRPL15 HSPC145|L15mt|MRP-L15|MRP-L7|RPML7 mitochondrial ribosomal protein L15 protein-coding chr7-772 chr7 100837342 100837586 + 25.3 0.000 non-coding (NR_146550, exon 2 of 2) non-coding (NR_146550, exon 2 of 2) -9941 NM_004444 2050 Hs.437008 NM_004444 ENSG00000196411 EPHB4 CMAVM2|HFASD|HTK|LMPHM7|MYK1|TYRO11 EPH receptor B4 protein-coding chr1-1060 chr1 108816429 108816673 + 25.3 0.000 intron (NM_152763, intron 15 of 15) intron (NM_152763, intron 15 of 15) 40543 NM_152763 254268 Hs.729441 NM_152763 ENSG00000162641 AKNAD1 C1orf62 AKNA domain containing 1 protein-coding chr17-192 chr17 68457658 68457902 + 25.3 0.000 promoter-TSS (NR_135471) promoter-TSS (NR_135471) -256 NR_135471 55062 Hs.463964 NM_017983 ENSG00000070540 WIPI1 ATG18|ATG18A|WIPI49 WD repeat domain, phosphoinositide interacting 1 protein-coding chr12-359 chr12 7860493 7860737 + 25.3 0.000 intron (NM_001286237, intron 1 of 9) intron (NM_001286237, intron 1 of 9) 12300 NM_001286235 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding chr6-273 chr6 26440482 26440726 + 25.3 0.000 promoter-TSS (NM_006994) promoter-TSS (NM_006994) 100 NM_197974 10384 Hs.167741 NM_006994 ENSG00000111801 BTN3A3 BTF3|BTN3.3 butyrophilin subfamily 3 member A3 protein-coding chr2-564 chr2 162318687 162318931 + 25.3 0.000 promoter-TSS (NM_022168) promoter-TSS (NM_022168) 46 NM_001330266 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding chr1-1365 chr1 88327732 88327976 + 25.3 0.000 Intergenic Intergenic -356290 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr1-440 chr1 114669894 114670138 + 25.3 0.000 promoter-TSS (NM_198459) promoter-TSS (NM_198459) 33 NM_001256404 163259 Hs.654928 NM_198459 ENSG00000175984 DENND2C dJ1156J9.1 DENN domain containing 2C protein-coding chr8-400 chr8 81050857 81051101 + 25.3 0.000 intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 61089 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding chr1-1748 chr1 45243815 45244059 + 25.3 0.000 Intergenic L1M2|LINE|L1 -37332 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr9-473 chr9 70411174 70411418 + 25.3 0.000 intron (NM_001206, intron 1 of 1) intron (NM_001206, intron 1 of 1) 3361 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr2-1013 chr2 190535700 190535944 + 25.3 0.000 Intergenic Intergenic -1100 NM_001142645 100131211 Hs.659824 NM_001142645 ENSG00000189362 NEMP2 TMEM194B nuclear envelope integral membrane protein 2 protein-coding chr3-1220 chr3 12576351 12576595 + 25.3 0.000 intron (NM_001271707, intron 4 of 6) intron (NM_001271707, intron 4 of 6) 19386 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr18-232 chr18 35117893 35118137 + 25.3 0.000 intron (NM_001143827, intron 5 of 7) intron (NM_001143827, intron 5 of 7) 76602 NM_001256420 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr18-76 chr18 62187195 62187439 + 25.3 0.000 promoter-TSS (NM_001346231) promoter-TSS (NM_001346231) 62 NM_001346233 57614 Hs.465323 NM_020854 ENSG00000134444 RELCH HsT3308|HsT885|KIAA1468 RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing protein-coding chr12-681 chr12 104359357 104359601 + 25.3 0.000 Intergenic L1M5|LINE|L1 55740 NM_001008394 493861 Hs.659857 NM_001008394 ENSG00000255150 EID3 NS4EB|NSE4B|NSMCE4B EP300 interacting inhibitor of differentiation 3 protein-coding chr4-820 chr4 63881824 63882068 + 25.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 527504 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding chr7-344 chr7 55254745 55254989 + 25.3 0.000 intron (NR_110426, intron 2 of 3) CpG 768 NR_110426 102725541 Hs.590524 NR_110426 ELDR Fabl|LINC01156 EGFR long non-coding downstream RNA ncRNA chr14-219 chr14 73136857 73137101 + 25.3 0.000 intron (NM_000021, intron 1 of 11) CpG 472 NM_007318 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding chr10-484 chr10 127278218 127278462 + 25.3 0.000 intron (NM_001290223, intron 29 of 51) intron (NM_001290223, intron 29 of 51) -81749 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr4-457 chr4 53347353 53347597 + 25.3 0.000 intron (NM_152540, intron 2 of 8) L2a|LINE|L2 18586 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr8-478 chr8 24065352 24065596 + 25.3 0.000 Intergenic Intergenic -210668 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr18-286 chr18 66133679 66133923 + 25.3 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 382789 NM_004361 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding chr9-597 chr9 83544411 83544655 + 25.3 0.000 Intergenic L1PA15-16|LINE|L1 -6132 NM_001244959 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr6-663 chr6 18387371 18387615 + 25.3 0.000 5' UTR (NM_182757, exon 1 of 8) 5' UTR (NM_182757, exon 1 of 8) 143 NM_182757 255488 Hs.148741 NM_182757 ENSG00000137393 RNF144B IBRDC2|PIR2|bA528A10.3|p53RFP ring finger protein 144B protein-coding chr7-328 chr7 100725766 100726010 + 25.3 0.000 Intergenic MIRc|SINE|MIR 5420 NM_000799 2056 Hs.2303 NM_000799 ENSG00000130427 EPO DBAL|ECYT5|EP|MVCD2 erythropoietin protein-coding chr12-379 chr12 124344838 124345082 + 25.3 0.000 intron (NM_001077261, intron 32 of 47) intron (NM_001077261, intron 32 of 47) -7718 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr11-677 chr11 74849655 74849899 + 25.3 0.000 intron (NM_001270380, intron 11 of 14) intron (NM_001270380, intron 11 of 14) 99314 NM_182969 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr3-870 chr3 129058755 129058999 + 25.3 0.000 Intergenic MER66C|LTR|ERV1 -1890 NM_000174 2815 Hs.1144 NM_000174 ENSG00000169704 GP9 CD42a|GPIX glycoprotein IX platelet protein-coding chr15-146 chr15 90872771 90873015 + 25.3 0.000 promoter-TSS (NM_001289824) promoter-TSS (NM_001289824) 15 NM_001289824 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr12-890 chr12 110180832 110181076 + 25.3 0.000 intron (NR_144950, intron 12 of 18) intron (NR_144950, intron 12 of 18) 56597 NM_014055 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding chr9-634 chr9 6218179 6218423 + 25.3 0.000 intron (NM_001199640, intron 1 of 6) intron (NM_001199640, intron 1 of 6) 2494 NM_001314046 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr8-123 chr8 144082450 144082694 + 25.3 0.000 promoter-TSS (NM_003801) promoter-TSS (NM_003801) -62 NM_003801 8733 Hs.627962 NM_003801 ENSG00000197858 GPAA1 GAA1|GPIBD15|hGAA1 glycosylphosphatidylinositol anchor attachment 1 protein-coding chr5-663 chr5 62135973 62136217 + 25.3 0.000 Intergenic Intergenic -170067 NM_001243952 3796 Hs.558351 NM_004520 ENSG00000068796 KIF2A CDCBM3|HK2|KIF2 kinesin family member 2A protein-coding chr1-1467 chr1 2153768 2154012 + 25.3 0.000 intron (NR_146911, intron 6 of 15) intron (NR_146911, intron 6 of 15) 29985 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr15-135 chr15 99123857 99124101 + 25.3 0.000 intron (NM_145728, intron 2 of 3) intron (NM_145728, intron 2 of 3) 18899 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr2-563 chr2 113756426 113756670 + 25.3 0.000 promoter-TSS (NM_001330314) promoter-TSS (NM_001330314) 94 NM_025181 80255 Hs.355655 NM_025181 ENSG00000115084 SLC35F5 - solute carrier family 35 member F5 protein-coding chr9-1055 chr9 4833202 4833446 + 25.3 0.000 intron (NM_005772, intron 4 of 8) intron (NM_005772, intron 4 of 8) -6445 NM_001286701 10171 Hs.194121 NM_005772 ENSG00000120158 RCL1 RNAC|RPCL1 RNA terminal phosphate cyclase like 1 protein-coding chr9-1073 chr9 72525271 72525515 + 25.3 0.000 intron (NM_138691, intron 1 of 23) intron (NM_138691, intron 1 of 23) 3592 NM_138691 117531 Hs.670211 NM_138691 ENSG00000165091 TMC1 DFNA36|DFNB11|DFNB7 transmembrane channel like 1 protein-coding chr2-138 chr2 240560985 240561229 + 25.3 0.000 promoter-TSS (NM_001354025) promoter-TSS (NM_001354025) 3 NR_148698 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr7-709 chr7 28958482 28958726 + 25.3 0.000 promoter-TSS (NM_014817) promoter-TSS (NM_014817) -274 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding chr11-956 chr11 121688097 121688341 + 25.3 0.000 Intergenic Intergenic 235905 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr3-651 chr3 45139129 45139373 + 25.3 0.000 intron (NM_178181, intron 1 of 3) intron (NM_178181, intron 1 of 3) 7127 NM_022842 64866 Hs.476093 NM_022842 ENSG00000163814 CDCP1 CD318|SIMA135|TRASK CUB domain containing protein 1 protein-coding chr5-583 chr5 62475283 62475527 + 25.3 0.000 intron (NM_016338, intron 8 of 29) AluJb|SINE|Alu 56521 NM_001134779 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding chr2-1042 chr2 232697439 232697683 + 25.3 0.000 intron (NM_001103148, intron 1 of 27) CpG 230 NR_103495 26058 Hs.565319 NM_015575 ENSG00000204120 GIGYF2 GYF2|PARK11|PERQ2|PERQ3|TNRC15 GRB10 interacting GYF protein 2 protein-coding chr14-740 chr14 69543850 69544094 + 25.3 0.000 Intergenic Intergenic 30899 NM_001271507 56936 Hs.458319 NM_020181 ENSG00000267909 CCDC177 C14orf162|PLPL coiled-coil domain containing 177 protein-coding chr7-1332 chr7 87398488 87398732 + 25.3 0.000 exon (NM_001143935, exon 19 of 19) exon (NM_001143935, exon 19 of 19) 52946 NM_021151 54677 Hs.125039 NM_021151 ENSG00000005469 CROT COT carnitine O-octanoyltransferase protein-coding chr11-245 chr11 78574856 78575100 + 25.3 0.000 promoter-TSS (NM_001243251) promoter-TSS (NM_001243251) -114 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr2-1884 chr2 186951876 186952120 + 25.3 0.000 Intergenic MER21-int|LTR|ERVL -102828 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr4-300 chr4 145098265 145098509 + 25.3 0.000 promoter-TSS (NM_001040876) promoter-TSS (NM_001040876) 76 NM_001040876 6059 Hs.12013 NM_002940 ENSG00000164163 ABCE1 ABC38|OABP|RLI|RLI1|RNASEL1|RNASELI|RNS4I ATP binding cassette subfamily E member 1 protein-coding chr11-497 chr11 43358718 43358962 + 25.3 0.000 promoter-TSS (NM_018259) promoter-TSS (NM_018259) -45 NM_001307943 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding chr19-954 chr19 16106232 16106476 + 25.3 0.000 Intergenic Intergenic -5535 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding chr11-1270 chr11 27904221 27904465 + 25.3 0.000 Intergenic Intergenic -152472 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chr11-859 chr11 9787978 9788222 + 25.3 0.000 intron (NM_030962, intron 35 of 39) intron (NM_030962, intron 35 of 39) -28567 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chr11-603 chr11 17845577 17845821 + 25.1 0.000 intron (NR_104040, intron 11 of 11) intron (NR_104040, intron 11 of 11) 109751 NM_001112741 3746 Hs.552896 NM_004976 ENSG00000129159 KCNC1 EPM7|KV3.1|KV4|NGK2 potassium voltage-gated channel subfamily C member 1 protein-coding chr16-846 chr16 68406722 68406966 + 25.1 0.000 intron (NM_018667, intron 1 of 8) intron (NM_018667, intron 1 of 8) 41664 NM_018667 55512 Hs.368421 NM_018667 ENSG00000103056 SMPD3 NSMASE2 sphingomyelin phosphodiesterase 3 protein-coding chr6-338 chr6 166997777 166998021 + 25.1 0.000 promoter-TSS (NR_037504) promoter-TSS (NR_037504) 13 NR_037504 100500857 NR_037504 ENSG00000265828 MIR3939 mir-3939 microRNA 3939 ncRNA chr1-752 chr1 23916812 23917056 + 25.1 0.000 Intergenic Intergenic -3572 NM_001841 1269 Hs.73037 NM_001841 ENSG00000188822 CNR2 CB-2|CB2|CX5 cannabinoid receptor 2 protein-coding chr15-732 chr15 87354731 87354975 + 25.1 0.000 Intergenic Intergenic -222076 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr17-922 chr17 3705168 3705412 + 25.1 0.000 Intergenic Intergenic -8886 NR_037928 100533970 Hs.731607 NR_037928 ENSG00000257950 P2RX5-TAX1BP3 P2RX5|P2X5 P2RX5-TAX1BP3 readthrough (NMD candidate) ncRNA chrX-167 chrX 105564577 105564821 + 25.1 0.000 intron (NM_017416, intron 6 of 10) intron (NM_017416, intron 6 of 10) -257840 NM_198465 203447 Hs.209527 NM_198465 ENSG00000123572 NRK NESK Nik related kinase protein-coding chr20-322 chr20 24920842 24921086 + 25.1 0.000 Intergenic HERVE-int|LTR|ERV1 -28305 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding chr6-452 chr6 36874880 36875124 + 25.1 0.000 promoter-TSS (NM_016059) promoter-TSS (NM_016059) -199 NM_016059 51645 Hs.27693 NM_016059 ENSG00000137168 PPIL1 CGI-124|CYPL1|PPIase|hCyPX peptidylprolyl isomerase like 1 protein-coding chr2-135 chr2 214809651 214809895 + 25.1 0.000 promoter-TSS (NM_001282548) promoter-TSS (NM_001282548) -90 NM_001282548 580 Hs.591642 NM_000465 ENSG00000138376 BARD1 - BRCA1 associated RING domain 1 protein-coding chr20-102 chr20 3818430 3818674 + 25.1 0.000 Intergenic Intergenic -1972 NM_001204446 55317 Hs.104806 NM_018347 ENSG00000125843 AP5S1 C20orf29 adaptor related protein complex 5 subunit sigma 1 protein-coding chr5-535 chr5 67002289 67002533 + 25.1 0.000 intron (NR_111908, intron 1 of 1) L2c|LINE|L2 1743 NR_111908 101928794 Hs.672435 NR_111908 MAST4-AS1 - MAST4 antisense RNA 1 ncRNA chr3-1021 chr3 133452859 133453103 + 25.1 0.000 intron (NM_003571, intron 4 of 6) intron (NM_003571, intron 4 of 6) 2795 NR_135278 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr10-600 chr10 127148879 127149123 + 25.1 0.000 intron (NM_001039762, intron 5 of 5) intron (NM_001039762, intron 5 of 5) 47590 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr14-184 chr14 68763360 68763604 + 25.1 0.000 Intergenic Intergenic 30432 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr15-532 chr15 95843178 95843422 + 25.1 0.000 Intergenic Intergenic 284541 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr11-639 chr11 118531048 118531292 + 25.1 0.000 promoter-TSS (NM_032780) promoter-TSS (NM_032780) -22 NM_032780 84866 Hs.564188 NM_032780 ENSG00000149582 TMEM25 - transmembrane protein 25 protein-coding chr14-347 chr14 103260726 103260970 + 25.1 0.000 Intergenic HERVL66-int|LTR|ERVL -56436 NR_135269 105378183 Hs.132624 NR_135269 LOC105378183 - uncharacterized LOC105378183 ncRNA chr1-456 chr1 1157722 1157966 + 25.1 0.000 Intergenic CpG -9260 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr20-232 chr20 34066538 34066782 + 25.1 0.000 intron (NM_007367, intron 2 of 8) AluJr|SINE|Alu 17541 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA chr1-1232 chr1 244104444 244104688 + 25.1 0.000 Intergenic L2a|LINE|L2 51361 NM_006352 10472 Hs.69997 NM_006352 ENSG00000179456 ZBTB18 C2H2-171|MRD22|RP58|TAZ-1|ZNF238 zinc finger and BTB domain containing 18 protein-coding chr8-163 chr8 108443529 108443773 + 25.1 0.000 promoter-TSS (NM_001329493) promoter-TSS (NM_001329493) 27 NM_014673 9694 Hs.654351 NM_014673 ENSG00000104412 EMC2 KIAA0103|TTC35 ER membrane protein complex subunit 2 protein-coding chr22-322 chr22 30609409 30609653 + 25.1 0.000 intron (NM_000355, intron 1 of 8) intron (NM_000355, intron 1 of 8) 2357 NM_000355 6948 Hs.417948 NM_000355 ENSG00000185339 TCN2 D22S676|D22S750|II|TC|TC II|TC-2|TC2|TCII transcobalamin 2 protein-coding chr8-212 chr8 66033220 66033464 + 25.1 0.000 intron (NM_033105, intron 1 of 5) intron (NM_033105, intron 1 of 5) 11789 NR_146171 85479 Hs.491885 NM_033105 ENSG00000147570 DNAJC5B CSP-beta DnaJ heat shock protein family (Hsp40) member C5 beta protein-coding chr21-60 chr21 32278868 32279112 + 25.1 0.000 promoter-TSS (NM_018944) promoter-TSS (NM_018944) 59 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr2-1348 chr2 189843717 189843961 + 25.1 0.000 intron (NR_110332, intron 6 of 12) MIRb|SINE|MIR 59389 NM_001321047 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr1-741 chr1 971391 971635 + 25.1 0.000 intron (NM_001367552, intron 8 of 15) intron (NM_001367552, intron 8 of 15) 5031 NM_001160184 84069 Hs.528691 NM_032129 ENSG00000187583 PLEKHN1 CLPABP pleckstrin homology domain containing N1 protein-coding chr2-1857 chr2 163667643 163667887 + 25.1 0.000 intron (NM_001321825, intron 1 of 1) L2c|LINE|L2 68243 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr2-543 chr2 19730963 19731207 + 25.1 0.000 Intergenic Intergenic -137769 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr14-119 chr14 65411818 65412062 + 25.1 0.000 promoter-TSS (NR_038170) promoter-TSS (NR_038170) 677 NR_024334 645431 Hs.713717 NR_024334 FUT8-AS1 - FUT8 antisense RNA 1 ncRNA chr19-771 chr19 531116 531360 + 25.1 0.000 promoter-TSS (NM_004359) promoter-TSS (NM_004359) -522 NM_004359 997 Hs.514997 NM_004359 ENSG00000099804 CDC34 E2-CDC34|UBC3|UBCH3|UBE2R1 cell division cycle 34 protein-coding chr20-106 chr20 37012720 37012964 + 25.1 0.000 intron (NM_002895, intron 19 of 21) SVA_D|Retroposon|SVA -60999 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr1-929 chr1 40267869 40268113 + 25.1 0.000 intron (NM_005857, intron 3 of 9) intron (NM_005857, intron 3 of 9) 9755 NM_005857 10269 Hs.132642 NM_005857 ENSG00000084073 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding chr19-706 chr19 45783355 45783599 + 25.1 0.000 promoter-TSS (NM_001288764) promoter-TSS (NM_001288764) -987 NM_001081560 1760 Hs.631596 NM_004409 ENSG00000104936 DMPK DM|DM1|DM1PK|DMK|MDPK|MT-PK DM1 protein kinase protein-coding chr10-307 chr10 132791281 132791525 + 25.1 0.000 Intergenic Intergenic -5256 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr6-222 chr6 17706405 17706649 + 25.1 0.000 promoter-TSS (NR_134618) promoter-TSS (NR_134618) 307 NM_001278210 9972 Hs.601591 NM_005124 ENSG00000124789 NUP153 HNUP153|N153 nucleoporin 153 protein-coding chr17-556 chr17 61308632 61308876 + 25.1 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 58950 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr2-1145 chr2 196601524 196601768 + 25.1 0.000 Intergenic Intergenic -8092 NM_001348768 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr1-1345 chr1 59057268 59057512 + 25.1 0.000 intron (NR_110626, intron 2 of 2) intron (NR_110626, intron 2 of 2) 36914 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr16-86 chr16 89299707 89299951 + 25.1 0.000 intron (NR_045839, intron 5 of 9) intron (NR_045839, intron 5 of 9) 3701 NR_136339 105371414 Hs.657381 NR_136339 ENSG00000260279 LOC105371414 - uncharacterized LOC105371414 ncRNA chr5-656 chr5 28592107 28592351 + 25.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -304564 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA chr5-920 chr5 126472177 126472421 + 25.1 0.000 exon (NM_001349541, exon 4 of 14) exon (NM_001349541, exon 4 of 14) 7149 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr1-1089 chr1 181010950 181011194 + 25.1 0.000 intron (NM_005819, intron 1 of 7) intron (NM_005819, intron 1 of 7) 11798 NM_005819 10228 Hs.518417 NM_005819 ENSG00000135823 STX6 - syntaxin 6 protein-coding chr1-1337 chr1 54153786 54154030 + 25.1 0.000 promoter-TSS (NM_201546) promoter-TSS (NM_201546) -727 NM_001353655 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr20-51 chr20 462379 462623 + 25.1 0.000 promoter-TSS (NM_144628) promoter-TSS (NM_144628) 32 NM_144628 128637 Hs.590876 NM_144628 ENSG00000125875 TBC1D20 C20orf140|WARBM4 TBC1 domain family member 20 protein-coding chr7-1227 chr7 17029232 17029476 + 25.1 0.000 Intergenic Intergenic -147371 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding chr4-770 chr4 177569473 177569717 + 25.1 0.000 Intergenic Intergenic -127092 NR_033655 175 Hs.207776 NM_000027 ENSG00000038002 AGA AGU|ASRG|GA aspartylglucosaminidase protein-coding chr1-1218 chr1 203267461 203267705 + 25.1 0.000 Intergenic Intergenic -19569 NR_117097 100506775 Hs.443859 NR_117097 ENSG00000231507 LINC01353 - long intergenic non-protein coding RNA 1353 ncRNA chr3-902 chr3 191412868 191413112 + 25.1 0.000 Intergenic MER70A|LTR|ERVL -12534 NR_120606 103344926 NR_120606 LINCR-0002 - uncharacterized LincR-0002 ncRNA chr10-536 chr10 101000302 101000546 + 25.1 0.000 intron (NM_001318100, intron 1 of 4) intron (NM_001318100, intron 1 of 4) 616 NM_001318100 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr12-767 chr12 104280750 104280994 + 25.1 0.000 intron (NM_001093771, intron 3 of 16) MLT2D|LTR|ERVL -6160 NM_182743 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr13-272 chr13 112627054 112627298 + 25.1 0.000 Intergenic Intergenic -19868 NM_207440 400165 Hs.591213 NM_207440 ATP11AUN C13orf35|SMABLO1 ATP11A upstream neighbor protein-coding chr1-2587 chr1 186535872 186536116 + 25.1 0.000 Intergenic Intergenic -74880 NM_002597 5132 Hs.654381 NM_002597 ENSG00000116703 PDC MEKA|PHD|PhLOP|PhLP phosducin protein-coding chr9-418 chr9 2424704 2424948 + 25.1 0.000 Intergenic Intergenic -196961 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr1-1890 chr1 201110395 201110639 + 25.1 0.000 intron (NM_000069, intron 1 of 43) intron (NM_000069, intron 1 of 43) 1909 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr8-201 chr8 133565997 133566241 + 25.1 0.000 intron (NM_003033, intron 1 of 8) intron (NM_003033, intron 1 of 8) 5768 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr12-347 chr12 109463339 109463583 + 25.1 0.000 intron (NR_133898, intron 1 of 5) intron (NR_133898, intron 1 of 5) 13839 NM_031954 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr3-514 chr3 15207225 15207469 + 25.1 0.000 intron (NM_014296, intron 1 of 20) Tigger3b|DNA|TcMar-Tigger 1101 NM_014296 23473 Hs.595234 NM_014296 ENSG00000131375 CAPN7 CALPAIN7|PALBH calpain 7 protein-coding chr2-222 chr2 9003589 9003833 + 25.1 0.000 promoter-TSS (NM_001321266) promoter-TSS (NM_001321266) -27 NM_001321267 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding chr17-505 chr17 59786569 59786813 + 25.1 0.000 intron (NM_001329400, intron 5 of 9) intron (NM_001329400, intron 5 of 9) -54575 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA chr4-411 chr4 49578771 49579015 + 25.1 0.000 Intergenic Intergenic 592251 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr1-1018 chr1 34407200 34407444 + 25.1 0.000 Intergenic Intergenic 230415 NM_001134734 84970 Hs.194610 NM_032884 ENSG00000142698 C1orf94 - chromosome 1 open reading frame 94 protein-coding chr20-190 chr20 3066666 3066910 + 25.1 0.000 Intergenic L2a|LINE|L2 -4832 NM_000915 5020 Hs.113216 NM_000915 ENSG00000101405 OXT OT|OT-NPI|OXT-NPI oxytocin/neurophysin I prepropeptide protein-coding chr11-657 chr11 33736384 33736628 + 25.1 0.000 promoter-TSS (NM_203330) promoter-TSS (NM_203330) -27 NM_203329 966 Hs.278573 NM_000611 ENSG00000085063 CD59 16.3A5|1F5|EJ16|EJ30|EL32|G344|HRF-20|HRF20|MAC-IP|MACIF|MEM43|MIC11|MIN1|MIN2|MIN3|MIRL|MSK21|p18-20 CD59 molecule (CD59 blood group) protein-coding chr1-1927 chr1 224430618 224430862 + 25.1 0.000 intron (NM_001115113, intron 3 of 13) intron (NM_001115113, intron 3 of 13) 3559 NM_025160 80232 Hs.497873 NM_025160 ENSG00000162923 WDR26 CDW2|GID7|MIP2|SKDEAS WD repeat domain 26 protein-coding chr15-278 chr15 41104382 41104626 + 25.1 0.000 intron (NM_017553, intron 1 of 35) intron (NM_017553, intron 1 of 35) 11742 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr3-1037 chr3 153399973 153400217 + 25.1 0.000 intron (NR_146713, intron 5 of 6) L1MCb|LINE|L1 -84400 NR_160966 152118 Hs.58586 NR_160966 C3orf79 - chromosome 3 open reading frame 79 ncRNA chr12-389 chr12 3200383 3200627 + 24.9 0.000 intron (NM_006675, intron 2 of 8) CpG 123126 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr22-366 chr22 19691686 19691930 + 24.9 0.000 Intergenic Intergenic -22695 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding chr19-841 chr19 58098269 58098513 + 24.9 0.000 promoter-TSS (NM_023926) promoter-TSS (NM_023926) -28 NM_023926 65982 Hs.235390 NM_023926 ENSG00000121413 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding chr12-418 chr12 57217236 57217480 + 24.9 0.000 intron (NM_007224, intron 1 of 1) CpG 564 NM_007224 11247 Hs.745023 NM_007224 ENSG00000182379 NXPH4 NPH4 neurexophilin 4 protein-coding chr19-383 chr19 6361324 6361568 + 24.9 0.000 promoter-TSS (NM_006012) promoter-TSS (NM_006012) -85 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr5-876 chr5 40224168 40224412 + 24.9 0.000 Intergenic Intergenic 171999 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA chr1-879 chr1 160219363 160219607 + 24.9 0.000 intron (NR_028104, intron 10 of 12) intron (NR_028104, intron 10 of 12) -10616 NR_123725 729867 Hs.674191 NR_123725 ENSG00000227741 LOC729867 - uncharacterized LOC729867 ncRNA chr7-406 chr7 151727803 151728047 + 24.9 0.000 intron (NM_016203, intron 3 of 15) intron (NM_016203, intron 3 of 15) 8338 NM_001363698 51422 Hs.647072 NM_016203 ENSG00000106617 PRKAG2 AAKG|AAKG2|CMH6|H91620p|WPWS protein kinase AMP-activated non-catalytic subunit gamma 2 protein-coding chr13-489 chr13 75643760 75644004 + 24.9 0.000 intron (NM_001306080, intron 1 of 30) intron (NM_001306080, intron 1 of 30) 7552 NM_001306080 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr3-276 chr3 61564638 61564882 + 24.9 0.000 intron (NM_002841, intron 1 of 29) CpG 3189 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr11-540 chr11 128453525 128453769 + 24.9 0.000 Intergenic L2b|LINE|L2 68663 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr8-678 chr8 119094064 119094308 + 24.9 0.000 intron (NM_001324095, intron 5 of 7) Arthur1B|DNA|hAT-Tip100 -25404 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA chr7-611 chr7 2281523 2281767 + 24.9 0.000 intron (NM_013321, intron 1 of 10) intron (NM_013321, intron 1 of 10) -24068 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr22-335 chr22 42933714 42933958 + 24.9 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 13205 NM_007229 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr22-276 chr22 19986377 19986621 + 24.9 0.000 intron (NM_001670, intron 3 of 19) intron (NM_001670, intron 3 of 19) 22746 NR_039918 100616414 NR_039918 ENSG00000284031 MIR4761 - microRNA 4761 ncRNA chr8-453 chr8 120857771 120858015 + 24.9 0.000 Intergenic Intergenic -45847 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr10-628 chr10 34809317 34809561 + 24.9 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 5857 NM_019619 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr19-533 chr19 1481714 1481958 + 24.9 0.000 exon (NM_017573, exon 15 of 15) exon (NM_017573, exon 15 of 15) -2621 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr7-449 chr7 2451610 2451854 + 24.9 0.000 Intergenic Intergenic 24651 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr7-360 chr7 139017148 139017392 + 24.9 0.000 Intergenic Intergenic 18772 NM_080660 92092 Hs.512833 NM_080660 ENSG00000146858 ZC3HAV1L C7orf39 zinc finger CCCH-type containing, antiviral 1 like protein-coding chr14-265 chr14 61252798 61253042 + 24.9 0.000 Intergenic Intergenic 28418 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr6-264 chr6 146544239 146544483 + 24.9 0.000 intron (NM_006834, intron 1 of 2) intron (NM_006834, intron 1 of 2) 528 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr4-750 chr4 140617446 140617690 + 24.9 0.000 Intergenic Intergenic 25512 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr21-25 chr21 37366526 37366770 + 24.9 0.000 promoter-TSS (NM_101395) promoter-TSS (NM_101395) -125 NM_001347721 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr16-656 chr16 66703824 66704068 + 24.9 0.000 Intergenic Intergenic -7203 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr11-1624 chr11 95375858 95376102 + 24.9 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -143505 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr3-1026 chr3 136729139 136729383 + 24.9 0.000 intron (NM_005862, intron 1 of 33) AluJb|SINE|Alu 23117 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr19-643 chr19 56477877 56478121 + 24.9 0.000 promoter-TSS (NM_001321356) promoter-TSS (NM_001321356) 125 NR_036521 100128252 Hs.23133 NM_198879 ENSG00000166770 ZNF667-AS1 MORT ZNF667 antisense RNA 1 (head to head) ncRNA chr1-1411 chr1 169031630 169031874 + 24.9 0.000 intron (NR_104091, intron 3 of 4) intron (NR_104091, intron 3 of 4) 55253 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA chr3-653 chr3 47281688 47281932 + 24.9 0.000 intron (NM_022342, intron 1 of 19) intron (NM_022342, intron 1 of 19) 989 NM_001134878 64147 Hs.373947 NM_022342 ENSG00000088727 KIF9 - kinesin family member 9 protein-coding chr1-1004 chr1 21012919 21013163 + 24.9 0.000 intron (NM_003760, intron 2 of 31) L1PBa|LINE|L1 -24609 NR_031657 100302155 NR_031657 ENSG00000221808 MIR1256 MIRN1256|hsa-mir-1256 microRNA 1256 ncRNA chr9-178 chr9 134068556 134068800 + 24.9 0.000 promoter-TSS (NM_007371) promoter-TSS (NM_007371) -652 NM_007371 8019 Hs.522472 NM_007371 ENSG00000169925 BRD3 ORFX|RING3L bromodomain containing 3 protein-coding chr10-847 chr10 66827386 66827630 + 24.9 0.000 intron (NM_001127384, intron 7 of 17) MIRc|SINE|MIR -98528 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding chr5-244 chr5 141509031 141509275 + 24.9 0.000 intron (NM_018923, intron 3 of 3) intron (NM_018923, intron 3 of 3) 19912 NM_032407 56097 Hs.368160 NM_018929 ENSG00000240764 PCDHGC5 PCDH-GAMMA-C5 protocadherin gamma subfamily C, 5 protein-coding chr1-1085 chr1 172826072 172826316 + 24.9 0.000 Intergenic Intergenic 167091 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding chr4-122 chr4 127880772 127881016 + 24.9 0.000 promoter-TSS (NM_001190799) promoter-TSS (NM_001190799) 1 NM_001190799 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr15-167 chr15 69452680 69452924 + 24.9 0.000 promoter-TSS (NM_213725) promoter-TSS (NM_213725) -16 NM_213725 6176 Hs.356502 NM_001003 ENSG00000137818 RPLP1 LP1|P1|RPP1 ribosomal protein lateral stalk subunit P1 protein-coding chr3-597 chr3 88957874 88958118 + 24.9 0.000 Intergenic Intergenic -149625 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr4-940 chr4 34193946 34194190 + 24.9 0.000 intron (NR_147184, intron 2 of 3) intron (NR_147184, intron 2 of 3) 75679 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr2-521 chr2 205700826 205701070 + 24.9 0.000 intron (NM_018534, intron 2 of 15) intron (NM_018534, intron 2 of 15) 18447 NM_201266 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding chr16-193 chr16 28211767 28212011 + 24.9 0.000 promoter-TSS (NM_015171) promoter-TSS (NM_015171) 76 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr12-277 chr12 57089858 57090102 + 24.9 0.000 intron (NM_005967, intron 1 of 6) intron (NM_005967, intron 1 of 6) 866 NM_001330305 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr9-542 chr9 125746071 125746315 + 24.9 0.000 promoter-TSS (NR_122032) promoter-TSS (NR_122032) -264 NR_122032 51145 Hs.104671 NM_016158 LOC51145 - uncharacterized LOC51145 ncRNA chr9-1130 chr9 131066558 131066802 + 24.9 0.000 intron (NM_006059, intron 13 of 27) MIRb|SINE|MIR -29796 NM_001185096 83543 Hs.4944 NM_031426 ENSG00000126878 AIF1L C9orf58|IBA2 allograft inflammatory factor 1 like protein-coding chr19-481 chr19 1943075 1943319 + 24.9 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) 2025 NM_001319 1455 Hs.651905 NM_001319 ENSG00000133275 CSNK1G2 CK1g2 casein kinase 1 gamma 2 protein-coding chr5-570 chr5 33032640 33032884 + 24.9 0.000 Intergenic Intergenic 85319 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA chr17-875 chr17 62693757 62694001 + 24.9 0.000 TTS (NM_006039) TTS (NM_006039) -12327 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr2-557 chr2 85468592 85468836 + 24.9 0.000 Intergenic Intergenic 49783 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding chr15-99 chr15 60478852 60479096 + 24.9 0.000 promoter-TSS (NR_120340) promoter-TSS (NR_120340) 168 NM_001018089 79664 Hs.200943 NM_024611 ENSG00000128915 ICE2 BRCC1|NARG2 interactor of little elongation complex ELL subunit 2 protein-coding chrX-71 chrX 15737975 15738219 + 24.9 0.000 promoter-TSS (NM_007220) promoter-TSS (NM_007220) -173 NM_007220 11238 Hs.653287 NM_007220 ENSG00000169239 CA5B CA-VB|CAVB carbonic anhydrase 5B protein-coding chr19-891 chr19 48967917 48968161 + 24.9 0.000 TTS (NM_001161587) TTS (NM_001161587) 2730 NM_000146 2512 Hs.433670 NM_000146 ENSG00000087086 FTL LFTD|NBIA3 ferritin light chain protein-coding chr18-92 chr18 36153319 36153563 + 24.9 0.000 intron (NM_001324467, intron 11 of 20) MER21A|LTR|ERVL 23542 NM_001242876 55250 Hs.8739 NM_018255 ENSG00000134759 ELP2 MRT58|SHINC-2|STATIP1|StIP elongator acetyltransferase complex subunit 2 protein-coding chr11-672 chr11 69040951 69041195 + 24.9 0.000 Intergenic MER21C|LTR|ERVL -7859 NM_139075 219931 Hs.131851 NM_139075 ENSG00000162341 TPCN2 SHEP10|TPC2 two pore segment channel 2 protein-coding chr6-159 chr6 127266841 127267085 + 24.9 0.000 5' UTR (NM_001242849, exon 1 of 3) 5' UTR (NM_001242849, exon 1 of 3) 125 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr3-562 chr3 25455603 25455847 + 24.9 0.000 intron (NR_110892, intron 1 of 6) intron (NR_110892, intron 1 of 6) -2585 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr3-1274 chr3 48563318 48563562 + 24.9 0.000 TTS (NM_000094) TTS (NM_000094) 341 NM_033199 90226 Hs.631914 NM_033199 ENSG00000145040 UCN2 SRP|UCN-II|UCNI|UR|URP urocortin 2 protein-coding chr2-433 chr2 241734216 241734460 + 24.9 0.000 promoter-TSS (NM_001287249) promoter-TSS (NM_001287249) -292 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr9-703 chr9 128364715 128364959 + 24.9 0.000 intron (NR_031672, intron 2 of 2).4 intron (NR_031672, intron 2 of 2).4 -6482 NM_001135947 81605 Hs.495229 NM_030914 ENSG00000167118 URM1 C9orf74 ubiquitin related modifier 1 protein-coding chr9-601 chr9 96856913 96857157 + 24.9 0.000 Intergenic Intergenic -2521 NM_001346995 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding chr11-254 chr11 16791665 16791909 + 24.9 0.000 intron (NM_001329631, intron 19 of 22) intron (NM_001329631, intron 19 of 22) 53140 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr4-925 chr4 13892256 13892500 + 24.9 0.000 intron (NR_121681, intron 3 of 3) intron (NR_121681, intron 3 of 3) -219590 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr7-1144 chr7 106947382 106947626 + 24.9 0.000 Intergenic Intergenic 82025 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr4-90 chr4 185471294 185471538 + 24.9 0.000 promoter-TSS (NR_133944) promoter-TSS (NR_133944) -15 NR_133944 105377590 Hs.563183 NR_133944 ENSG00000249679 LOC105377590 - uncharacterized LOC105377590 ncRNA chr8-679 chr8 120971035 120971279 + 24.9 0.000 Intergenic Intergenic -159111 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr19-1148 chr19 1855981 1856225 + 24.9 0.000 intron (NM_031918, intron 1 of 1) intron (NM_031918, intron 1 of 1) 7476 NM_031918 83855 Hs.136280 NM_031918 ENSG00000129911 KLF16 BTEB4|DRRF|NSLP2 Kruppel like factor 16 protein-coding chr11-548 chr11 1750684 1750928 + 24.9 0.000 promoter-TSS (NM_001170820) promoter-TSS (NM_001170820) -211 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr13-165 chr13 20714845 20715089 + 24.9 0.000 intron (NM_138284, intron 2 of 2) intron (NM_138284, intron 2 of 2) 11624 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr10-534 chr10 97685646 97685890 + 24.9 0.000 intron (NM_021732, intron 1 of 2) intron (NM_021732, intron 1 of 2) 1473 NM_021732 60370 Hs.23918 NM_021732 ENSG00000119986 AVPI1 PP5395|VIP32|VIT32 arginine vasopressin induced 1 protein-coding chr16-183 chr16 67846644 67846888 + 24.9 0.000 promoter-TSS (NM_005796) promoter-TSS (NM_005796) -167 NM_001322039 10204 Hs.356630 NM_005796 ENSG00000102898 NUTF2 NTF-2|NTF2|PP15 nuclear transport factor 2 protein-coding chr19-347 chr19 10829860 10830104 + 24.9 0.000 TTS (NR_106851) TTS (NR_106851) 1009 NR_106851 102466737 NR_106851 ENSG00000275640 MIR6793 hsa-mir-6793 microRNA 6793 ncRNA chr6-559 chr6 138493520 138493764 + 24.9 0.000 intron (NM_020464, intron 2 of 6) X6A_LINE|LINE|CR1 5852 NM_001144060 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr8-457 chr8 127810133 127810377 + 24.9 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 14293 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr11-588 chr11 762889 763133 + 24.9 0.000 intron (NM_006755, intron 4 of 7) intron (NM_006755, intron 4 of 7) 14476 NM_001318820 347862 Hs.218362 NM_182612 ENSG00000177225 GATD1 PDDC1 glutamine amidotransferase like class 1 domain containing 1 protein-coding chr4-691 chr4 48330007 48330251 + 24.9 0.000 Intergenic Intergenic -11400 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr1-2647 chr1 221101797 221102041 + 24.8 0.000 Intergenic Intergenic -221779 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr19-529 chr19 56132311 56132555 + 24.8 0.000 Intergenic MER90a|LTR|ERV1 -8854 NM_001253792 55311 Hs.24545 NM_018337 ENSG00000167685 ZNF444 EZF-2|EZF2|ZSCAN17 zinc finger protein 444 protein-coding chr11-1184 chr11 76371227 76371471 + 24.8 0.000 intron (NM_004705, intron 1 of 4) L2b|LINE|L2 9616 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr15-572 chr15 67115415 67115659 + 24.8 0.000 intron (NM_005902, intron 1 of 8) intron (NM_005902, intron 1 of 8) -10179 NM_001145102 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr5-756 chr5 73759952 73760196 + 24.8 0.000 intron (NM_001177693, intron 4 of 35) intron (NM_001177693, intron 4 of 35) -53472 NM_001244364 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr4-230 chr4 1222399 1222643 + 24.8 0.000 intron (NM_001012614, intron 5 of 9) intron (NM_001012614, intron 5 of 9) 12401 NR_104331 285463 Hs.707614 NR_104331 ENSG00000280927 CTBP1-AS PCAT10 CTBP1 antisense RNA ncRNA chr22-491 chr22 37087245 37087489 + 24.8 0.000 intron (NM_153609, intron 7 of 17) intron (NM_153609, intron 7 of 17) 16286 NM_153609 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding chr8-597 chr8 15842861 15843105 + 24.8 0.000 Intergenic Intergenic 302720 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding chr6-859 chr6 140436537 140436781 + 24.8 0.000 Intergenic L1MCa|LINE|L1 231407 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA chr13-193 chr13 106535459 106535703 + 24.8 0.000 promoter-TSS (NM_004093) promoter-TSS (NM_004093) -541 NM_004093 1948 Hs.149239 NM_004093 ENSG00000125266 EFNB2 EPLG5|HTKL|Htk-L|LERK5 ephrin B2 protein-coding chr11-756 chr11 79018552 79018796 + 24.8 0.000 intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) 383435 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA chr2-832 chr2 37590108 37590352 + 24.8 0.000 Intergenic Intergenic 81969 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr5-533 chr5 61306960 61307204 + 24.8 0.000 Intergenic Intergenic -25176 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr17-1161 chr17 60154604 60154848 + 24.8 0.000 intron (NR_137422, intron 1 of 11) intron (NR_137422, intron 1 of 11) 4753 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr13-268 chr13 110916905 110917149 + 24.8 0.000 Intergenic MIR1_Amn|SINE|MIR -1958 NR_104586 55608 Hs.525163 NM_017664 ENSG00000088448 ANKRD10 - ankyrin repeat domain 10 protein-coding chr1-1585 chr1 221438101 221438345 + 24.8 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -101927 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr5-541 chr5 127403848 127404092 + 24.8 0.000 intron (NM_001308121, intron 8 of 13) L1MA1|LINE|L1 113174 NM_001256545 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding chr13-146 chr13 57629920 57630164 + 24.8 0.000 Intergenic CpG -1702 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr7-567 chr7 48154829 48155073 + 24.8 0.000 Intergenic L1MEf|LINE|L1 -16507 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr7-237 chr7 538209 538453 + 24.8 0.000 Intergenic Intergenic 17940 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr11-660 chr11 63668028 63668272 + 24.8 0.000 intron (NM_001290048, intron 1 of 12) intron (NM_001290048, intron 1 of 12) 3226 NM_015459 25923 Hs.356719 NM_015459 ENSG00000184743 ATL3 HSN1F atlastin GTPase 3 protein-coding chr6-285 chr6 107848279 107848523 + 24.8 0.000 Intergenic CpG -24088 NM_198081 256380 Hs.486109 NM_198081 ENSG00000146285 SCML4 dJ47M23.1 Scm polycomb group protein like 4 protein-coding chr9-245 chr9 74952286 74952530 + 24.8 0.000 promoter-TSS (NR_121183) promoter-TSS (NR_121183) 504 NM_017998 55071 Hs.532296 NM_017998 ENSG00000135045 C9orf40 - chromosome 9 open reading frame 40 protein-coding chr14-468 chr14 36818935 36819179 + 24.8 0.000 intron (NM_001171170, intron 2 of 10) intron (NM_001171170, intron 2 of 10) 133334 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr7-951 chr7 47557786 47558030 + 24.8 0.000 intron (NM_022748, intron 1 of 30) intron (NM_022748, intron 1 of 30) 24203 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr4-1057 chr4 121298525 121298769 + 24.8 0.000 Intergenic Intergenic -71164 NM_001244764 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr3-1098 chr3 12990639 12990883 + 24.8 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -3660 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr4-1037 chr4 100421218 100421462 + 24.8 0.000 exon (NM_016242, exon 8 of 12) exon (NM_016242, exon 8 of 12) -26093 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA chr6-858 chr6 139708900 139709144 + 24.8 0.000 Intergenic Intergenic -62051 NR_038399 100132735 Hs.62646 NR_038399 ENSG00000231426 FILNC1 - FOXO induced long non-coding RNA 1 ncRNA chr6-624 chr6 125946375 125946619 + 24.8 0.000 Intergenic L2|LINE|L2 -10273 NM_138571 135114 Hs.72325 NM_138571 ENSG00000111911 HINT3 HINT4 histidine triad nucleotide binding protein 3 protein-coding chr3-1209 chr3 9091741 9091985 + 24.8 0.000 intron (NM_014850, intron 3 of 21) intron (NM_014850, intron 3 of 21) -100630 NR_121663 101927416 Hs.475364 NR_121663 ENSG00000228723 SRGAP3-AS2 - SRGAP3 antisense RNA 2 ncRNA chr11-700 chr11 2162321 2162565 + 24.8 0.000 Intergenic Intergenic -1234 NM_000207 3630 Hs.272259 NM_000207 ENSG00000254647 INS IDDM|IDDM1|IDDM2|ILPR|IRDN|MODY10 insulin protein-coding chr1-2584 chr1 185441402 185441646 + 24.8 0.000 Intergenic MLT2C1|LTR|ERVL -106485 NR_038424 100288079 Hs.131220 NR_038424 ENSG00000261024 GS1-279B7.1 - microtubule associated protein 1 light chain 3 beta pseudogene pseudo chr5-564 chr5 10514257 10514501 + 24.8 0.000 intron (NR_134289, intron 1 of 2) intron (NR_134289, intron 1 of 2) -5185 NR_134290 389273 Hs.519206 NR_134289 ENSG00000249160 LINC02213 - long intergenic non-protein coding RNA 2213 ncRNA chr6-271 chr6 18043296 18043540 + 24.8 0.000 Intergenic Intergenic -55783 NM_001105566 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr6-423 chr6 144287114 144287358 + 24.8 0.000 Intergenic Intergenic -4501 NM_007124 7402 Hs.133135 NM_007124 ENSG00000152818 UTRN DMDL|DRP|DRP1 utrophin protein-coding chr2-484 chr2 12534585 12534829 + 24.8 0.000 intron (NR_110196, intron 4 of 5) intron (NR_110196, intron 4 of 5) -182165 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding chr7-366 chr7 1466341 1466585 + 24.8 0.000 Intergenic Intergenic -6993 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr19-423 chr19 33373461 33373705 + 24.8 0.000 promoter-TSS (NM_001252296) promoter-TSS (NM_001252296) -126 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr7-368 chr7 2107200 2107444 + 24.8 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -18270 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr7-379 chr7 39414363 39414607 + 24.8 0.000 intron (NM_001370959, intron 6 of 9) CpG -8139 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA chr16-606 chr16 381058 381302 + 24.8 0.000 intron (NM_021259, intron 1 of 12) intron (NM_021259, intron 1 of 12) 798 NM_021259 58986 Hs.288940 NM_021259 ENSG00000129925 TMEM8A GPI-PLA2|M83|PGAP6|TMEM6|TMEM8 transmembrane protein 8A protein-coding chr17-504 chr17 57473466 57473710 + 24.8 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 50009 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr19-280 chr19 12610794 12611038 + 24.8 0.000 promoter-TSS (NM_020714) promoter-TSS (NM_020714) -4 NM_153358 163049 Hs.720677 NM_153358 ENSG00000173875 ZNF791 - zinc finger protein 791 protein-coding chr5-396 chr5 151686867 151687111 + 24.8 0.000 promoter-TSS (NM_003118) promoter-TSS (NM_003118) -74 NM_001309443 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr16-281 chr16 85557797 85558041 + 24.8 0.000 Intergenic Intergenic -53490 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr17-186 chr17 21980458 21980702 + 24.8 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -222415 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr11-439 chr11 76700692 76700936 + 24.8 0.000 intron (NR_024042, intron 13 of 20) intron (NR_024042, intron 13 of 20) 20975 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr14-267 chr14 68965117 68965361 + 24.8 0.000 intron (NM_001102, intron 1 of 20) MIR3|SINE|MIR 14063 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chrX-86 chrX 150983182 150983426 + 24.8 0.000 promoter-TSS (NM_001301228) promoter-TSS (NM_001301228) -31 NM_005342 3149 Hs.19114 NM_005342 ENSG00000029993 HMGB3 HMG-2a|HMG-4|HMG2A|HMG4 high mobility group box 3 protein-coding chr3-1335 chr3 67489920 67490164 + 24.8 0.000 intron (NM_001177599, intron 9 of 10) MER57F|LTR|ERV1 164572 NM_001177599 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr14-434 chr14 88983798 88984042 + 24.8 0.000 Intergenic Intergenic 159269 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr3-1462 chr3 168117270 168117514 + 24.8 0.000 Intergenic Intergenic -21468 NM_001308155 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding chr20-81 chr20 62740301 62740545 + 24.8 0.000 intron (NM_002531, intron 1 of 3) intron (NM_002531, intron 1 of 3) 31587 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr18-56 chr18 5488827 5489071 + 24.8 0.000 intron (NM_001281535, intron 4 of 21) intron (NM_001281535, intron 4 of 21) 51607 NM_001281533 23136 Hs.213394 NM_012307 ENSG00000082397 EPB41L3 4.1B|DAL-1|DAL1 erythrocyte membrane protein band 4.1 like 3 protein-coding chr4-399 chr4 24519760 24520004 + 24.8 0.000 TTS (NR_030299) TTS (NR_030299) 408 NR_030299 693158 NR_030299 ENSG00000207697 MIR573 MIRN573|hsa-mir-573|mir-573 microRNA 573 ncRNA chr8-491 chr8 42579416 42579660 + 24.8 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -37584 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr16-410 chr16 281330 281574 + 24.8 0.000 intron (NM_001176, intron 1 of 5) intron (NM_001176, intron 1 of 5) 861 NM_001176 398 Hs.647388 NM_001176 ENSG00000242173 ARHGDIG RHOGDI-3 Rho GDP dissociation inhibitor gamma protein-coding chr12-485 chr12 112108585 112108829 + 24.8 0.000 promoter-TSS (NM_024953) promoter-TSS (NM_024953) 76 NM_024953 80018 Hs.530941 NM_024953 ENSG00000111300 NAA25 C12orf30|MDM20|NAP1 N(alpha)-acetyltransferase 25, NatB auxiliary subunit protein-coding chr2-933 chr2 45885356 45885600 + 24.8 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 233803 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr1-836 chr1 46223598 46223842 + 24.8 0.000 Intergenic Intergenic -3415 NM_001243766 55624 Hs.525134 NM_017739 ENSG00000085998 POMGNT1 GNTI.2|GnT I.2|LGMD2O|LGMDR15|MEB|MGAT1.2|RP76|gnT-I.2 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) protein-coding chr3-1143 chr3 106425002 106425246 + 24.8 0.000 Intergenic Intergenic -555723 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr1-1744 chr1 43800350 43800594 + 24.8 0.000 intron (NM_001270459, intron 3 of 11) intron (NM_001270459, intron 3 of 11) -38150 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA chr7-555 chr7 22822683 22822927 + 24.8 0.000 promoter-TSS (NM_019059) promoter-TSS (NM_019059) 44 NM_019059 54543 Hs.112318 NM_019059 ENSG00000196683 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 protein-coding chr6-1060 chr6 125262517 125262761 + 24.8 0.000 intron (NM_003287, intron 6 of 6) intron (NM_003287, intron 6 of 6) 39328 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr14-605 chr14 105480840 105481084 + 24.8 0.000 TTS (NR_073085) TTS (NR_073085) 3719 NR_073085 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr4-943 chr4 35964009 35964253 + 24.8 0.000 Intergenic Intergenic 279808 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding chr15-508 chr15 74051379 74051623 + 24.8 0.000 Intergenic Intergenic 31049 NM_001038640 342096 Hs.546408 NM_001038640 ENSG00000159289 GOLGA6A GLP|GOLGA6 golgin A6 family member A protein-coding chr11-775 chr11 130400937 130401181 + 24.8 0.000 non-coding (NR_148980, exon 6 of 7) non-coding (NR_148980, exon 6 of 7) 27550 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr12-392 chr12 6689041 6689285 + 24.6 0.000 5' UTR (NM_133476, exon 1 of 10) 5' UTR (NM_133476, exon 1 of 10) 212 NM_133476 171017 Hs.103315 NM_133476 ENSG00000126746 ZNF384 CAGH1|CAGH1A|CIZ|ERDA2|NMP4|NP|TNRC1 zinc finger protein 384 protein-coding chr19-1177 chr19 6271398 6271642 + 24.6 0.000 intron (NM_005934, intron 1 of 11) intron (NM_005934, intron 1 of 11) 8455 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr13-269 chr13 110955196 110955440 + 24.6 0.000 Intergenic MER89|LTR|ERV1 -10709 NR_126378 104355135 Hs.649708 NR_126378 LINC00431 - long intergenic non-protein coding RNA 431 ncRNA chr9-246 chr9 81689704 81689948 + 24.6 0.000 promoter-TSS (NM_001303103) promoter-TSS (NM_001303103) 113 NR_109772 101927502 Hs.528628 NR_109772 ENSG00000233926 LOC101927502 - uncharacterized LOC101927502 ncRNA chr16-195 chr16 30786456 30786700 + 24.6 0.000 intron (NM_001080417, intron 1 of 2) CpG 627 NM_001345970 23361 Hs.301094 NM_001080417 ENSG00000102870 ZNF629 ZNF|ZNF65 zinc finger protein 629 protein-coding chr10-946 chr10 126778320 126778564 + 24.6 0.000 Intergenic Intergenic -107932 NR_146939 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr1-736 chr1 228406888 228407132 + 24.6 0.000 promoter-TSS (NM_145214) promoter-TSS (NM_145214) -175 NM_145214 81559 Hs.13543 NM_145214 ENSG00000154370 TRIM11 BIA1|RNF92 tripartite motif containing 11 protein-coding chr1-1225 chr1 219837904 219838148 + 24.6 0.000 Intergenic Intergenic 90625 NM_018713 55532 Hs.284450 NM_018713 ENSG00000196660 SLC30A10 HMDPC|HMNDYT1|ZNT10|ZNT8|ZRC1|ZnT-10 solute carrier family 30 member 10 protein-coding chr3-349 chr3 134374384 134374628 + 24.6 0.000 promoter-TSS (NM_001278685) promoter-TSS (NM_001278685) -59 NM_001278685 51421 Hs.426312 NM_016201 ENSG00000114019 AMOTL2 LCCP angiomotin like 2 protein-coding chr12-521 chr12 52871062 52871306 + 24.6 0.000 Intergenic Intergenic -22190 NM_173352 196374 Hs.665267 NM_173352 ENSG00000170423 KRT78 CK-78|K5B|K78|Kb40 keratin 78 protein-coding chr5-480 chr5 126462132 126462376 + 24.6 0.000 intron (NR_146196, intron 1 of 14) intron (NR_146196, intron 1 of 14) -2896 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr6-262 chr6 136792991 136793235 + 24.6 0.000 promoter-TSS (NM_005923) promoter-TSS (NM_005923) -636 NM_005923 4217 Hs.186486 NM_005923 ENSG00000197442 MAP3K5 ASK1|MAPKKK5|MEKK5 mitogen-activated protein kinase kinase kinase 5 protein-coding chr13-291 chr13 79750263 79750507 + 24.6 0.000 Intergenic Intergenic -54001 NR_125785 102724076 Hs.208617 NR_125785 ENSG00000229011 LINC01038 - long intergenic non-protein coding RNA 1038 ncRNA chr2-674 chr2 65432548 65432792 + 24.6 0.000 promoter-TSS (NM_181784) promoter-TSS (NM_181784) -71 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr16-321 chr16 82170217 82170461 + 24.6 0.000 promoter-TSS (NM_005792) promoter-TSS (NM_005792) -115 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding chr21-57 chr21 28142877 28143121 + 24.6 0.000 intron (NR_126012, intron 5 of 5) THE1D|LTR|ERVL-MaLR 52596 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA chr4-732 chr4 110480094 110480338 + 24.6 0.000 intron (NM_001977, intron 1 of 19) intron (NM_001977, intron 1 of 19) 4061 NM_001977 2028 Hs.435765 NM_001977 ENSG00000138792 ENPEP APA|CD249|gp160 glutamyl aminopeptidase protein-coding chr17-986 chr17 44899417 44899661 + 24.6 0.000 promoter-TSS (NM_001258399) promoter-TSS (NM_001258399) 86 NM_001258354 9343 Hs.151787 NM_004247 ENSG00000108883 EFTUD2 MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD elongation factor Tu GTP binding domain containing 2 protein-coding chr14-349 chr14 104100297 104100541 + 24.6 0.000 intron (NM_001080464, intron 6 of 15) intron (NM_001080464, intron 6 of 15) 14719 NM_001080464 374569 Hs.146239 NM_001080464 ENSG00000166183 ASPG C14orf76|GPA/WT|LYSOLP asparaginase protein-coding chr5-745 chr5 54210961 54211205 + 24.6 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 99490 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr2-239 chr2 23637113 23637357 + 24.6 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 252056 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr22-251 chr22 45549192 45549436 + 24.6 0.000 intron (NM_006487, intron 13 of 14) intron (NM_006487, intron 13 of 14) 46431 NM_006487 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr10-505 chr10 62384222 62384466 + 24.6 0.000 intron (NM_199451, intron 2 of 7) intron (NM_199451, intron 2 of 7) -9217 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA chr19-784 chr19 4694475 4694719 + 24.6 0.000 3' UTR (NM_001365987, exon 13 of 13) 3' UTR (NM_001365987, exon 13 of 13) 15315 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr19-317 chr19 19203411 19203655 + 24.6 0.000 promoter-TSS (NM_001300945) promoter-TSS (NM_001300945) -119 NM_001300945 126382 Hs.708153 NM_176880 ENSG00000184162 NR2C2AP TRA16 nuclear receptor 2C2 associated protein protein-coding chr1-1955 chr1 241074642 241074886 + 24.6 0.000 intron (NM_001350116, intron 3 of 16) intron (NM_001350116, intron 3 of 16) -57508 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr11-888 chr11 50329546 50329790 + 24.6 0.000 Intergenic L1PA4|LINE|L1 -31206 NR_003034 441601 Hs.144683 NR_003034 ENSG00000255042 LOC441601 - septin 7 pseudogene pseudo chr6-1111 chr6 157449673 157449917 + 24.6 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) 68605 NM_153746 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding chr11-1353 chr11 114292294 114292538 + 24.6 0.000 Intergenic Intergenic -3397 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding chr7-276 chr7 148884324 148884568 + 24.6 0.000 promoter-TSS (NM_001203248) promoter-TSS (NM_001203248) -97 NM_004456 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr8-162 chr8 102601096 102601340 + 24.6 0.000 Intergenic Intergenic 49629 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr11-934 chr11 81005746 81005990 + 24.6 0.000 Intergenic Intergenic -243065 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr19-410 chr19 1847753 1847997 + 24.6 0.000 intron (NM_020695, intron 1 of 15) CpG 608 NM_020695 57455 Hs.192477 NM_020695 ENSG00000079313 REXO1 ELOABP1|EloA-BP1|REX1|TCEB3BP1 RNA exonuclease 1 homolog protein-coding chr15-302 chr15 82159987 82160231 + 24.6 0.000 intron (NM_001040610, intron 14 of 17) MLT1F|LTR|ERVL-MaLR 71515 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chr16-352 chr16 1709025 1709269 + 24.6 0.000 intron (NM_001040439, intron 1 of 30) intron (NM_001040439, intron 1 of 30) 2952 NM_001040439 23162 Hs.207763 NM_015133 ENSG00000138834 MAPK8IP3 JIP-3|JIP3|JSAP1|NEDBA|SYD2|syd mitogen-activated protein kinase 8 interacting protein 3 protein-coding chr3-663 chr3 73419447 73419691 + 24.6 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) 14426 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr6-1115 chr6 158797780 158798024 + 24.6 0.000 intron (NM_003379, intron 1 of 12) L1MB7|LINE|L1 -20077 NR_102425 101409257 Hs.571207 NR_102425 ENSG00000233893 EZR-AS1 - EZR antisense RNA 1 ncRNA chr7-361 chr7 149065599 149065843 + 24.6 0.000 Intergenic CpG 24997 NM_152411 136051 Hs.729572 NM_152411 ENSG00000197362 ZNF786 - zinc finger protein 786 protein-coding chr14-544 chr14 63492406 63492650 + 24.6 0.000 intron (NM_001354926, intron 2 of 2) intron (NM_001354926, intron 2 of 2) 15710 NM_001282182 5529 Hs.334868 NM_006246 ENSG00000154001 PPP2R5E B56E|B56epsilon protein phosphatase 2 regulatory subunit B'epsilon protein-coding chr19-951 chr19 15283489 15283733 + 24.6 0.000 intron (NM_001330384, intron 1 of 11) intron (NM_001330384, intron 1 of 11) -3160 NM_014299 23476 Hs.187763 NM_014299 ENSG00000141867 BRD4 CAP|HUNK1|HUNKI|MCAP bromodomain containing 4 protein-coding chr14-180 chr14 50830015 50830259 + 24.6 0.000 intron (NM_016350, intron 2 of 28) CpG 984 NM_182946 51199 Hs.310429 NM_016350 ENSG00000100503 NIN SCKL7 ninein protein-coding chr22-387 chr22 30755409 30755653 + 24.6 0.000 intron (NM_030758, intron 2 of 13) intron (NM_030758, intron 2 of 13) -8722 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr2-544 chr2 19989815 19990059 + 24.6 0.000 promoter-TSS (NR_110235) promoter-TSS (NR_110235) 168 NM_020779 57539 Hs.205427 NM_020779 ENSG00000118965 WDR35 CED2|IFT121|IFTA1|SRTD7 WD repeat domain 35 protein-coding chr1-1440 chr1 213051451 213051695 + 24.6 0.000 intron (NM_001136138, intron 1 of 13) intron (NM_001136138, intron 1 of 13) 332 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr12-482 chr12 104177683 104177927 + 24.6 0.000 Intergenic Intergenic -37974 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr12-642 chr12 51727015 51727259 + 24.6 0.000 intron (NM_001369788, intron 12 of 25) intron (NM_001369788, intron 12 of 25) 104780 NM_001013690 401720 Hs.648218 NM_001013690 ENSG00000261308 FIGNL2 - fidgetin like 2 protein-coding chr6-562 chr6 149648545 149648789 + 24.6 0.000 promoter-TSS (NM_007044) promoter-TSS (NM_007044) 47 NM_007044 11104 Hs.450175 NM_007044 ENSG00000186625 KATNA1 - katanin catalytic subunit A1 protein-coding chr7-792 chr7 137687592 137687836 + 24.6 0.000 intron (NM_001321710, intron 2 of 32) intron (NM_001321710, intron 2 of 32) 158618 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr1-1179 chr1 94237178 94237422 + 24.6 0.000 intron (NM_001328664, intron 1 of 22) CpG 284 NM_001328666 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding chr18-176 chr18 24233065 24233309 + 24.6 0.000 intron (NM_001242508, intron 4 of 15) intron (NM_001242508, intron 4 of 15) 39045 NM_018030 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr5-235 chr5 98773521 98773765 + 24.6 0.000 promoter-TSS (NM_001366508) promoter-TSS (NM_001366508) -20 NM_001366508 285704 Hs.526902 NM_173670 ENSG00000174136 RGMB DRAGON repulsive guidance molecule BMP co-receptor b protein-coding chr4-337 chr4 112285812 112286056 + 24.6 0.000 promoter-TSS (NM_052864) promoter-TSS (NM_052864) -30 NM_052864 92610 Hs.310640 NM_052864 ENSG00000145365 TIFA T2BP|T6BP|TIFAA TRAF interacting protein with forkhead associated domain protein-coding chr1-1869 chr1 169741620 169741864 + 24.6 0.000 Intergenic LTR16C|LTR|ERVL -7663 NM_000450 6401 Hs.82848 NM_000450 ENSG00000007908 SELE CD62E|ELAM|ELAM1|ESEL|LECAM2 selectin E protein-coding chr15-575 chr15 72197318 72197562 + 24.6 0.000 intron (NM_001012642, intron 1 of 11) CpG 347 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr2-916 chr2 32678844 32679088 + 24.6 0.000 intron (NM_017735, intron 9 of 19) intron (NM_017735, intron 9 of 19) 43711 NR_039922 100616219 NR_039922 ENSG00000265057 MIR4765 - microRNA 4765 ncRNA chr2-192 chr2 127064725 127064969 + 24.6 0.000 intron (NM_139349, intron 6 of 14) intron (NM_139349, intron 6 of 14) 17218 NM_001320634 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr12-290 chr12 12611797 12612041 + 24.6 0.000 promoter-TSS (NM_001310) promoter-TSS (NM_001310) 43 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding chr10-464 chr10 32955033 32955277 + 24.6 0.000 intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) 2739 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr6-290 chr6 127300445 127300689 + 24.6 0.000 intron (NM_001002030, intron 5 of 5) MLT1E2|LTR|ERVL-MaLR 33729 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr13-81 chr13 40771252 40771496 + 24.6 0.000 promoter-TSS (NM_005830) promoter-TSS (NM_005830) -184 NM_005830 10240 Hs.596607 NM_005830 ENSG00000102738 MRPS31 IMOGN38|MRP-S31|S31mt mitochondrial ribosomal protein S31 protein-coding chr17-783 chr17 45128196 45128440 + 24.6 0.000 intron (NM_133373, intron 1 of 14) intron (NM_133373, intron 1 of 14) 4197 NM_133373 113026 Hs.380094 NM_133373 ENSG00000161714 PLCD3 PLC-delta-3 phospholipase C delta 3 protein-coding chr14-653 chr14 80389159 80389403 + 24.5 0.000 intron (NR_038355, intron 5 of 8) intron (NR_038355, intron 5 of 8) -158224 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr17-205 chr17 81422974 81423218 + 24.5 0.000 intron (NM_001291324, intron 1 of 27) intron (NM_001291324, intron 1 of 27) -22318 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr3-766 chr3 127575139 127575383 + 24.5 0.000 promoter-TSS (NR_106883) promoter-TSS (NR_106883) 70 NR_106883 102466199 NR_106883 ENSG00000275067 MIR6825 hsa-mir-6825 microRNA 6825 ncRNA chr22-334 chr22 41393434 41393678 + 24.5 0.000 intron (NM_003216, intron 2 of 3) AluY|SINE|Alu 11614 NM_003216 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr3-1279 chr3 49018171 49018415 + 24.5 0.000 exon (NM_001009996, exon 2 of 12) exon (NM_001009996, exon 2 of 12) 287 NM_001009996 55152 Hs.654815 NM_018114 ENSG00000178149 DALRD3 - DALR anticodon binding domain containing 3 protein-coding chr3-1016 chr3 129122892 129123136 + 24.5 0.000 promoter-TSS (NM_001204884) promoter-TSS (NM_001204884) -864 NM_001204883 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr1-906 chr1 1432455 1432699 + 24.5 0.000 intron (NR_125994, intron 1 of 1) intron (NR_125994, intron 1 of 1) 1996 NR_125995 102724312 NR_125994 LINC01770 - long intergenic non-protein coding RNA 1770 ncRNA chr21-62 chr21 33894841 33895085 + 24.5 0.000 3' UTR (NM_003024, exon 40 of 40) 3' UTR (NM_003024, exon 40 of 40) 20841 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chr9-791 chr9 98983531 98983775 + 24.5 0.000 intron (NM_001855, intron 2 of 41) intron (NM_001855, intron 2 of 41) 39746 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding chr18-75 chr18 58493904 58494148 + 24.5 0.000 intron (NM_052947, intron 12 of 12) intron (NM_052947, intron 12 of 12) -42874 NR_039899 100616357 NR_039899 ENSG00000207778 MIR3591 - microRNA 3591 ncRNA chr10-683 chr10 112754159 112754403 + 24.5 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -69215 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr4-364 chr4 8435845 8436089 + 24.5 0.000 intron (NM_003501, intron 1 of 17) HERV3-int|LTR|ERV1 4756 NM_003501 8310 Hs.479122 NM_003501 ENSG00000087008 ACOX3 - acyl-CoA oxidase 3, pristanoyl protein-coding chr15-288 chr15 57328227 57328471 + 24.5 0.000 Intergenic Intergenic 9211 NR_120337 101928611 Hs.569495 NR_120337 LINC01413 - long intergenic non-protein coding RNA 1413 ncRNA chr21-92 chr21 34640991 34641235 + 24.5 0.000 Intergenic Intergenic -26000 NM_004414 1827 Hs.282326 NM_004414 ENSG00000159200 RCAN1 ADAPT78|CSP1|DSC1|DSCR1|MCIP1|RCN1 regulator of calcineurin 1 protein-coding chr4-600 chr4 66178993 66179237 + 24.5 0.000 Intergenic Intergenic -97709 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr14-210 chr14 35122366 35122610 + 24.5 0.000 promoter-TSS (NM_001305156) promoter-TSS (NM_001305156) 54 NM_017917 55012 Hs.530712 NM_017917 ENSG00000092020 PPP2R3C C14orf10|G4-1|G5pr|GDRM|SPGF36 protein phosphatase 2 regulatory subunit B''gamma protein-coding chr4-313 chr4 15469681 15469925 + 24.5 0.000 promoter-TSS (NM_001164720) promoter-TSS (NM_001164720) -62 NM_020785 57545 Hs.590928 NM_020785 ENSG00000048342 CC2D2A JBTS9|MKS6 coiled-coil and C2 domain containing 2A protein-coding chr22-698 chr22 39967134 39967378 + 24.5 0.000 intron (NM_001291825, intron 4 of 6) intron (NM_001291825, intron 4 of 6) 20439 NM_001291825 9402 Hs.517499 NM_004810 ENSG00000100351 GRAP2 GADS|GRAP-2|GRB2L|GRBLG|GRID|GRPL|GrbX|Grf40|Mona|P38 GRB2 related adaptor protein 2 protein-coding chr4-426 chr4 118539446 118539690 + 24.5 0.000 intron (NR_003135, intron 3 of 7) intron (NR_003135, intron 3 of 7) 23243 NR_003135 645455 Hs.408293 NM_153243 CEP170P1 CEP170L|FAM68B|KIAA0470L centrosomal protein 170 pseudogene 1 pseudo chr5-307 chr5 34930123 34930367 + 24.5 0.000 intron (NM_194283, intron 1 of 12) CpG 652 NM_194283 134218 Hs.131887 NM_194283 ENSG00000168724 DNAJC21 BMFS3|DNAJA5|GS3|JJJ1 DnaJ heat shock protein family (Hsp40) member C21 protein-coding chr6-306 chr6 40719834 40720078 + 24.5 0.000 Intergenic Intergenic -132592 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr5-197 chr5 82178 82422 + 24.5 0.000 Intergenic Intergenic -9868 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr14-217 chr14 67819686 67819930 + 24.5 0.000 promoter-TSS (NM_001321819) promoter-TSS (NM_001321819) 29 NM_001321809 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr12-502 chr12 4997953 4998197 + 24.5 0.000 Intergenic Intergenic -45804 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding chr14-298 chr14 73740831 73741075 + 24.5 0.000 intron (NM_001043318, intron 1 of 11) intron (NM_001043318, intron 1 of 11) -17794 NR_039727 100616158 NR_039727 ENSG00000264741 MIR4505 mir-4505 microRNA 4505 ncRNA chr2-898 chr2 21837251 21837495 + 24.5 0.000 Intergenic Intergenic -126721 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA chr7-1113 chr7 69476430 69476674 + 24.5 0.000 Intergenic L2|LINE|L2 121072 NR_148926 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr3-413 chr3 138898519 138898763 + 24.5 0.000 Intergenic Intergenic 45379 NR_121649 103344930 Hs.195033 NR_121649 ENSG00000244578 LINC01391 - long intergenic non-protein coding RNA 1391 ncRNA chr2-944 chr2 55133895 55134139 + 24.5 0.000 intron (NM_001321904, intron 1 of 9) MER41B|LTR|ERV1 3814 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr13-338 chr13 68156065 68156309 + 24.5 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR 729138 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA chr7-1107 chr7 54831483 54831727 + 24.5 0.000 Intergenic MER4C|LTR|ERV1 72292 NR_110040 100996654 Hs.127991 NR_110040 LOC100996654 - uncharacterized LOC100996654 ncRNA chr1-1896 chr1 202193738 202193982 + 24.5 0.000 promoter-TSS (NM_001017403) promoter-TSS (NM_001017403) -130 NM_001017403 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr1-558 chr1 167935974 167936218 + 24.5 0.000 promoter-TSS (NM_001349774) promoter-TSS (NM_001349774) -100 NR_026550 25874 Hs.517768 NM_015415 ENSG00000143158 MPC2 BRP44|SLC54A2 mitochondrial pyruvate carrier 2 protein-coding chr17-820 chr17 81199011 81199255 + 24.5 0.000 intron (NM_001319228, intron 10 of 25) intron (NM_001319228, intron 10 of 25) 23832 NM_001319228 22994 Hs.514578 NM_014984 ENSG00000141577 CEP131 AZ1|AZI1|ZA1 centrosomal protein 131 protein-coding chr8-686 chr8 130335423 130335667 + 24.5 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -39012 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr3-1157 chr3 131772497 131772741 + 24.5 0.000 intron (NM_130808, intron 2 of 15) MamGypsy2-I|LTR|Gypsy 213312 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA chr5-507 chr5 173918066 173918310 + 24.5 0.000 intron (NM_001308193, intron 2 of 7) intron (NM_001308193, intron 2 of 7) 25137 NM_001308193 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr19-432 chr19 55640579 55640823 + 24.5 0.000 promoter-TSS (NM_207115) promoter-TSS (NM_207115) -301 NM_207115 51157 Hs.631551 NM_016202 ENSG00000213015 ZNF580 - zinc finger protein 580 protein-coding chr16-272 chr16 353154 353398 + 24.5 0.000 promoter-TSS (NM_181050) promoter-TSS (NM_181050) -553 NM_003502 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr11-453 chr11 9765690 9765934 + 24.5 0.000 intron (NR_036485, intron 1 of 2) intron (NR_036485, intron 1 of 2) -6279 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chrX-172 chrX 139933216 139933460 + 24.5 0.000 promoter-TSS (NM_001353810) promoter-TSS (NM_001353810) -285 NM_001353812 286410 Hs.88252 NM_173694 ENSG00000101974 ATP11C ATPIG|ATPIQ|HACXL ATPase phospholipid transporting 11C protein-coding chr2-1135 chr2 172503955 172504199 + 24.5 0.000 intron (NM_001365530, intron 25 of 25) intron (NM_001365530, intron 25 of 25) -38055 NR_157573 101929947 Hs.710861 NR_157573 ITGA6-AS1 - ITGA6 antisense RNA 1 ncRNA chr2-709 chr2 230219850 230220094 + 24.5 0.000 promoter-TSS (NM_004509) promoter-TSS (NM_004509) 12 NM_004509 3431 Hs.145150 NM_004509 ENSG00000135899 SP110 IFI41|IFI75|IPR1|VODI SP110 nuclear body protein protein-coding chr6-288 chr6 116100763 116101007 + 24.5 0.000 promoter-TSS (NM_152729) promoter-TSS (NM_152729) 32 NM_152729 221294 Hs.520341 NM_152729 ENSG00000178425 NT5DC1 C6orf200|LP2642|NT5C2L1 5'-nucleotidase domain containing 1 protein-coding chr6-717 chr6 112337182 112337426 + 24.5 0.000 Intergenic Intergenic -10026 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr3-1105 chr3 26657409 26657653 + 24.5 0.000 intron (NM_001317810, intron 2 of 2) intron (NM_001317810, intron 2 of 2) 32864 NM_001317810 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding chr1-1054 chr1 93179792 93180036 + 24.5 0.000 promoter-TSS (NM_206886) promoter-TSS (NM_206886) 499 NM_001167830 50999 Hs.482873 NM_016040 ENSG00000117500 TMED5 CGI-100|p24g2|p28 transmembrane p24 trafficking protein 5 protein-coding chr1-1575 chr1 199173109 199173353 + 24.5 0.000 intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 24633 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr19-748 chr19 34734218 34734462 + 24.5 0.000 promoter-TSS (NM_001145665) promoter-TSS (NM_001145665) 97 NM_001029997 339318 Hs.720472 NM_001029997 ENSG00000197841 ZNF181 HHZ181 zinc finger protein 181 protein-coding chr2-919 chr2 36365464 36365708 + 24.5 0.000 intron (NM_016441, intron 1 of 16) intron (NM_016441, intron 1 of 16) 9808 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr7-1276 chr7 44449046 44449290 + 24.5 0.000 intron (NM_015332, intron 2 of 5) L2|LINE|L2 41490 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr5-261 chr5 39424872 39425116 + 24.5 0.000 promoter-TSS (NM_001343) promoter-TSS (NM_001343) -14 NM_001343 1601 Hs.696631 NM_001343 ENSG00000153071 DAB2 DOC-2|DOC2 DAB adaptor protein 2 protein-coding chr1-2020 chr1 33528385 33528629 + 24.5 0.000 intron (NM_052896, intron 63 of 69) intron (NM_052896, intron 63 of 69) 55862 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr16-747 chr16 85757288 85757532 + 24.5 0.000 Intergenic L1MB7|LINE|L1 -6314 NR_161452 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr22-284 chr22 37675072 37675316 + 24.5 0.000 promoter-TSS (NM_002305) promoter-TSS (NM_002305) -442 NM_002305 3956 Hs.445351 NM_002305 ENSG00000100097 LGALS1 GAL1|GBP galectin 1 protein-coding chr1-601 chr1 109620849 109621093 + 24.5 0.000 promoter-TSS (NM_004037) promoter-TSS (NM_004037) 57 NM_001308170 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr3-1176 chr3 170017159 170017403 + 24.5 0.000 Intergenic Intergenic -20714 NM_014373 26996 Hs.231320 NM_014373 ENSG00000173890 GPR160 GPCR1|GPCR150 G protein-coupled receptor 160 protein-coding chr16-586 chr16 67967939 67968183 + 24.5 0.000 intron (NM_005072, intron 1 of 23) intron (NM_005072, intron 1 of 23) 576 NM_001145961 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr1-732 chr1 220370313 220370557 + 24.5 0.000 Intergenic Intergenic -97982 NM_012414 25782 Hs.654849 NM_012414 ENSG00000118873 RAB3GAP2 RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150 RAB3 GTPase activating non-catalytic protein subunit 2 protein-coding chr20-153 chr20 408034 408278 + 24.5 0.000 promoter-TSS (NM_031229) promoter-TSS (NM_031229) 106 NM_001323956 10616 Hs.29546 NM_006462 ENSG00000125826 RBCK1 C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 RANBP2-type and C3HC4-type zinc finger containing 1 protein-coding chr4-371 chr4 39458793 39459037 + 24.5 0.000 promoter-TSS (NM_000661) promoter-TSS (NM_000661) 33 NM_000661 6133 Hs.412370 NM_000661 ENSG00000163682 RPL9 L9|NPC-A-16 ribosomal protein L9 protein-coding chr13-522 chr13 102800459 102800703 + 24.5 0.000 intron (NM_001159596, intron 1 of 8) CpG 1462 NM_001159596 54841 Hs.288809 NM_017693 ENSG00000134897 BIVM - basic, immunoglobulin-like variable motif containing protein-coding chr9-342 chr9 131350211 131350455 + 24.5 0.000 Intergenic Intergenic 60610 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chr7-922 chr7 22814721 22814965 + 24.5 0.000 intron (NM_019059, intron 2 of 2) L2c|LINE|L2 8006 NM_019059 54543 Hs.112318 NM_019059 ENSG00000196683 TOMM7 TOM7 translocase of outer mitochondrial membrane 7 protein-coding chr12-867 chr12 87953056 87953300 + 24.5 0.000 Intergenic Intergenic 76223 NM_001363616 160419 Hs.112930 NM_152589 ENSG00000165805 C12orf50 - chromosome 12 open reading frame 50 protein-coding chr22-399 chr22 39298058 39298302 + 24.5 0.000 Intergenic Intergenic 15731 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr19-478 chr19 464192 464436 + 24.5 0.000 exon (NM_182577, exon 4 of 4) exon (NM_182577, exon 4 of 4) -3318 NM_012435 25759 Hs.30965 NM_012435 ENSG00000129946 SHC2 SCK|SHCB|SLI SHC adaptor protein 2 protein-coding chr3-218 chr3 48507640 48507884 + 24.5 0.000 Intergenic Intergenic -2936 NM_001272066 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr7-297 chr7 92159368 92159612 + 24.5 0.000 intron (NM_001161528, intron 1 of 4) intron (NM_001161528, intron 1 of 4) 5786 NM_001161528 401387 Hs.671729 NM_001045475 ENSG00000240720 LRRD1 - leucine rich repeats and death domain containing 1 protein-coding chr8-63 chr8 102653844 102654088 + 24.5 0.000 promoter-TSS (NM_001032282) promoter-TSS (NM_001032282) -2 NM_001032282 7071 Hs.435001 NM_005655 ENSG00000155090 KLF10 EGR-alpha|EGRA|TIEG|TIEG1 Kruppel like factor 10 protein-coding chr7-305 chr7 158856249 158856493 + 24.5 0.000 promoter-TSS (NM_001350916) promoter-TSS (NM_001350916) -187 NM_001350915 55112 Hs.389945 NM_018051 ENSG00000126870 WDR60 FAP163|SRPS6|SRTD8 WD repeat domain 60 protein-coding chr3-308 chr3 52934738 52934982 + 24.5 0.000 exon (NM_016329, exon 5 of 21) exon (NM_016329, exon 5 of 21) -37312 NM_001198974 100526772 NM_001198974 ENSG00000248592 STIMATE-MUSTN1 TMEM110-MUSTN1 STIMATE-MUSTN1 readthrough protein-coding chr10-910 chr10 103552559 103552803 + 24.5 0.000 intron (NM_004210, intron 1 of 5) L2b|LINE|L2 -35239 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr3-330 chr3 33096547 33096791 + 24.5 0.000 intron (NM_001039770, intron 1 of 1) CpG 163 NM_001079811 2720 Hs.443031 NM_000404 ENSG00000170266 GLB1 EBP|ELNR1|MPS4B galactosidase beta 1 protein-coding chr5-390 chr5 142446076 142446320 + 24.5 0.000 intron (NR_120664, intron 3 of 3) MSTA|LTR|ERVL-MaLR 120905 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA chr8-270 chr8 102788938 102789182 + 24.5 0.000 Intergenic Intergenic -17762 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr11-643 chr11 128716660 128716904 + 24.5 0.000 intron (NM_002017, intron 1 of 8) intron (NM_002017, intron 1 of 8) -20759 NR_038908 100507392 Hs.657715 NR_038908 ENSG00000254703 SENCR FLI1-AS1|lncRNA9 smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA ncRNA chr1-2670 chr1 230849521 230849765 + 24.3 0.000 intron (NM_001136494, intron 4 of 5) intron (NM_001136494, intron 4 of 5) 6364 NM_001136495 84886 Hs.520494 NM_032800 ENSG00000119280 C1orf198 - chromosome 1 open reading frame 198 protein-coding chr5-181 chr5 149345399 149345643 + 24.3 0.000 promoter-TSS (NM_152407) promoter-TSS (NM_152407) 22 NM_152407 134266 Hs.511816 NM_152407 ENSG00000164284 GRPEL2 Mt-GrpE#2 GrpE like 2, mitochondrial protein-coding chr4-379 chr4 139014618 139014862 + 24.3 0.000 Intergenic Intergenic -1041 NM_012118 25819 Hs.639842 NM_012118 ENSG00000151014 NOCT CCR4L|CCRN4L|Ccr4c|NOC nocturnin protein-coding chr7-559 chr7 33868197 33868441 + 24.3 0.000 Intergenic Intergenic -36596 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding chr1-1072 chr1 153507246 153507490 + 24.3 0.000 Intergenic Intergenic 28623 NM_014624 6277 Hs.275243 NM_014624 ENSG00000197956 S100A6 2A9|5B10|CABP|CACY|PRA|S10A6 S100 calcium binding protein A6 protein-coding chr11-360 chr11 65711977 65712221 + 24.3 0.000 promoter-TSS (NM_182709) promoter-TSS (NM_182709) -153 NM_001206833 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr4-187 chr4 24664901 24665145 + 24.3 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -80469 NM_001358 1665 Hs.696074 NM_001358 ENSG00000109606 DHX15 DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p DEAH-box helicase 15 protein-coding chr7-574 chr7 73850976 73851220 + 24.3 0.000 Intergenic Intergenic -8582 NM_152559 155368 Hs.647042 NM_152559 ENSG00000165171 METTL27 WBSCR27 methyltransferase like 27 protein-coding chr12-683 chr12 105934313 105934557 + 24.3 0.000 Intergenic Intergenic 205598 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr2-189 chr2 108786597 108786841 + 24.3 0.000 promoter-TSS (NM_001351544) promoter-TSS (NM_001351544) -31 NM_001351545 165055 Hs.362702 NM_144978 ENSG00000163006 CCDC138 - coiled-coil domain containing 138 protein-coding chr3-816 chr3 9952109 9952353 + 24.3 0.000 intron (NR_134900, intron 1 of 4) CpG 177 NM_207351 285368 Hs.598147 NM_207351 ENSG00000163704 PRRT3 - proline rich transmembrane protein 3 protein-coding chr1-916 chr1 19328814 19329058 + 24.3 0.000 3' UTR (NM_001287531, exon 8 of 8) 3' UTR (NM_001287531, exon 8 of 8) 16610 NR_109848 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr12-1153 chr12 65523483 65523727 + 24.3 0.000 intron (NR_120431, intron 2 of 3) MamRTE1|LINE|RTE-BovB 33706 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA chr5-825 chr5 154046589 154046833 + 24.3 0.000 intron (NM_001242336, intron 1 of 2) intron (NM_001242336, intron 1 of 2) 7744 NM_001135037 4238 Hs.432818 NM_005927 ENSG00000037749 MFAP3 - microfibril associated protein 3 protein-coding chr7-1142 chr7 105487962 105488206 + 24.3 0.000 intron (NM_001318164, intron 7 of 15) intron (NM_001318164, intron 7 of 15) 20436 NM_001318163 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr13-183 chr13 94112294 94112538 + 24.3 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 75575 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr12-663 chr12 67698838 67699082 + 24.3 0.000 Intergenic Intergenic 30515 NR_110063 101927901 Hs.369609 NR_110063 ENSG00000255970 LINC02421 - long intergenic non-protein coding RNA 2421 ncRNA chr19-497 chr19 45344924 45345168 + 24.3 0.000 intron (NM_177417, intron 1 of 12) intron (NM_177417, intron 1 of 12) 4296 NM_177417 147700 Hs.298079 NM_145275 ENSG00000104892 KLC3 KLC2|KLC2L|KLCt|KNS2B kinesin light chain 3 protein-coding chr20-198 chr20 31678752 31678996 + 24.3 0.000 intron (NR_134257, intron 1 of 2) intron (NR_134257, intron 1 of 2) 40962 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr2-1152 chr2 209525973 209526217 + 24.3 0.000 intron (NM_001039538, intron 2 of 14) intron (NM_001039538, intron 2 of 14) -53241 NM_001363913 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding chr1-1237 chr1 1038136 1038380 + 24.3 0.000 intron (NM_198576, intron 3 of 35) intron (NM_198576, intron 3 of 35) 4265 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr16-430 chr16 57801488 57801732 + 24.3 0.000 intron (NM_001318710, intron 1 of 19) intron (NM_001318710, intron 1 of 19) 881 NM_001130100 3801 Hs.23131 NM_005550 ENSG00000140859 KIFC3 - kinesin family member C3 protein-coding chr15-97 chr15 51622047 51622291 + 24.3 0.000 intron (NM_001174116, intron 1 of 42) CpG 602 NM_001174117 23312 Hs.511386 NM_015263 ENSG00000104093 DMXL2 DFNA71|PEPNS|RC3 Dmx like 2 protein-coding chr6-65 chr6 146543562 146543806 + 24.3 0.000 promoter-TSS (NM_006834) promoter-TSS (NM_006834) -149 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr4-508 chr4 13988757 13989001 + 24.3 0.000 Intergenic Intergenic -123089 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA chr12-336 chr12 78864617 78864861 + 24.3 0.000 promoter-TSS (NM_005639) promoter-TSS (NM_005639) -35 NM_005639 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr9-177 chr9 129697263 129697507 + 24.3 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 21321 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr22-133 chr22 32474605 32474849 + 24.3 0.000 promoter-TSS (NM_012179) promoter-TSS (NM_012179) -84 NM_012179 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chrX-514 chrX 109735170 109735414 + 24.3 0.000 TTS (NR_158569) TTS (NR_158569) -1900 NM_022977 2182 Hs.268785 NM_004458 ENSG00000068366 ACSL4 ACS4|FACL4|LACS4|MRX63|MRX68 acyl-CoA synthetase long chain family member 4 protein-coding chr17-290 chr17 75364098 75364342 + 24.3 0.000 intron (NM_002086, intron 2 of 5) intron (NM_002086, intron 2 of 5) 41458 NM_002086 2885 Hs.444356 NM_002086 ENSG00000177885 GRB2 ASH|EGFRBP-GRB2|Grb3-3|MST084|MSTP084|NCKAP2 growth factor receptor bound protein 2 protein-coding chr5-810 chr5 143986746 143986990 + 24.3 0.000 Intergenic Intergenic 174707 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr10-508 chr10 63722608 63722852 + 24.3 0.000 Intergenic LTR78B|LTR|ERV1 -200840 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr5-86 chr5 138492053 138492297 + 24.3 0.000 Intergenic CpG 26696 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr9-483 chr9 105341565 105341809 + 24.3 0.000 intron (NM_001330731, intron 4 of 15) intron (NM_001330731, intron 4 of 15) 97036 NM_001286730 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr8-508 chr8 89473867 89474111 + 24.3 0.000 Intergenic Intergenic 283722 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr2-268 chr2 47782689 47782933 + 24.3 0.000 promoter-TSS (NM_001281492) promoter-TSS (NM_001281492) -271 NM_001281493 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr6-424 chr6 144661215 144661459 + 24.3 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 255682 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr6-301 chr6 19153457 19153701 + 24.3 0.000 intron (NR_110860, intron 3 of 10) intron (NR_110860, intron 3 of 10) 26901 NR_110860 101928519 Hs.551771 NR_110860 LOC101928519 - uncharacterized LOC101928519 ncRNA chr16-388 chr16 30739448 30739692 + 24.3 0.000 exon (NM_006662, exon 34 of 34) exon (NM_006662, exon 34 of 34) -1072 NM_001256829 100862671 Hs.667372 NM_001256829 ENSG00000281991 TMEM265 IFITMD8 transmembrane protein 265 protein-coding chr8-263 chr8 60516902 60517146 + 24.3 0.000 promoter-TSS (NM_002865) promoter-TSS (NM_002865) 37 NM_002865 5862 Hs.369017 NM_002865 ENSG00000104388 RAB2A LHX|RAB2 RAB2A, member RAS oncogene family protein-coding chr5-391 chr5 142901012 142901256 + 24.3 0.000 intron (NR_146198, intron 6 of 22) Plat_L3|LINE|CR1 -32224 NR_046680 100874239 Hs.570896 NR_046680 ENSG00000226272 ARHGAP26-AS1 - ARHGAP26 antisense RNA 1 ncRNA chrY-7 chrY 11295481 11295725 + 24.3 0.000 Intergenic Intergenic 1125987 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr15-293 chr15 64866265 64866509 + 24.3 0.000 3' UTR (NM_025201, exon 6 of 6) 3' UTR (NM_025201, exon 6 of 6) 24472 NM_025201 80301 Hs.709337 NM_025201 ENSG00000241839 PLEKHO2 PLEKHQ1|PP1628|pp9099 pleckstrin homology domain containing O2 protein-coding chrX-467 chrX 55119693 55119937 + 24.3 0.000 Intergenic Intergenic 30797 NM_207339 203569 Hs.662489 NM_207339 ENSG00000234068 PAGE2 CT16.4|GAGEC2|GAGEE2|PAGE-2 PAGE family member 2 protein-coding chr10-592 chr10 92699525 92699769 + 24.3 0.000 Intergenic CpG 9692 NM_002729 3087 Hs.118651 NM_002729 ENSG00000152804 HHEX HEX|HMPH|HOX11L-PEN|PRH|PRHX hematopoietically expressed homeobox protein-coding chr5-578 chr5 55063211 55063455 + 24.3 0.000 Intergenic Intergenic 39077 NM_002104 3003 Hs.277937 NM_002104 ENSG00000113088 GZMK TRYP2 granzyme K protein-coding chr19-466 chr19 44212324 44212568 + 24.3 0.000 promoter-TSS (NM_001289166) promoter-TSS (NM_001289166) -82 NM_001289169 7770 Hs.298089 NM_182490 ENSG00000131115 ZNF227 - zinc finger protein 227 protein-coding chr2-467 chr2 186694012 186694256 + 24.3 0.000 promoter-TSS (NM_177454) promoter-TSS (NM_177454) 74 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding chr2-436 chr2 24456710 24456954 + 24.3 0.000 Intergenic Intergenic -34422 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr7-521 chr7 98276417 98276661 + 24.3 0.000 Intergenic Intergenic -5147 NM_015379 25798 Hs.567438 NM_015379 ENSG00000164713 BRI3 I3 brain protein I3 protein-coding chr2-292 chr2 120546200 120546444 + 24.3 0.000 Intergenic Intergenic -79973 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr10-454 chr10 6228146 6228390 + 24.3 0.000 intron (NM_001314063, intron 15 of 15) intron (NM_001314063, intron 15 of 15) 25336 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr10-1161 chr10 61190790 61191034 + 24.3 0.000 Intergenic Intergenic 174637 NR_108052 100507058 Hs.145227 NR_108052 ENSG00000227244 LINC00845 - long intergenic non-protein coding RNA 845 ncRNA chr7-347 chr7 72879151 72879395 + 24.3 0.000 promoter-TSS (NM_001367610) promoter-TSS (NM_001367610) -84 NM_001257190 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr9-900 chr9 79578200 79578444 + 24.3 0.000 intron (NM_001351556, intron 4 of 18) intron (NM_001351556, intron 4 of 18) 5145 NM_001351543 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr13-243 chr13 45120210 45120454 + 24.3 0.000 promoter-TSS (NM_004128) promoter-TSS (NM_004128) -178 NM_004128 2963 Hs.654582 NM_004128 ENSG00000188342 GTF2F2 BTF4|RAP30|TF2F2|TFIIF general transcription factor IIF subunit 2 protein-coding chr14-375 chr14 77615813 77616057 + 24.3 0.000 intron (NM_004863, intron 1 of 11) intron (NM_004863, intron 1 of 11) 832 NM_004863 9517 Hs.435661 NM_004863 ENSG00000100596 SPTLC2 HSN1C|LCB2|LCB2A|NSAN1C|SPT2|hLCB2a serine palmitoyltransferase long chain base subunit 2 protein-coding chr2-810 chr2 234444799 234445043 + 24.2 0.000 intron (NR_146988, intron 2 of 2) intron (NR_146988, intron 2 of 2) 9674 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr9-1323 chr9 125651581 125651825 + 24.2 0.000 intron (NM_001006619, intron 4 of 10) intron (NM_001006619, intron 4 of 10) 55505 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr6-1059 chr6 124484060 124484304 + 24.2 0.000 intron (NM_001300738, intron 4 of 7) Charlie4z|DNA|hAT-Charlie 201177 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding chr2-720 chr2 6506338 6506582 + 24.2 0.000 Intergenic Intergenic 127327 NR_110500 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA chr2-253 chr2 111122542 111122786 + 24.2 0.000 intron (NM_001204109, intron 1 of 3) CpG-16420 1750 NM_001204111 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chr1-1759 chr1 52005548 52005792 + 24.2 0.000 Intergenic LTR61|LTR|ERV1 -14970 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr1-2117 chr1 212286760 212287004 + 24.2 0.000 intron (NM_006243, intron 1 of 12) intron (NM_006243, intron 1 of 12) 1472 NM_006243 5525 Hs.744012 NM_006243 ENSG00000066027 PPP2R5A B56A|B56alpha|PR61A protein phosphatase 2 regulatory subunit B'alpha protein-coding chr5-1013 chr5 38041531 38041775 + 24.2 0.000 intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) 15956 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA chr12-1176 chr12 90211071 90211315 + 24.2 0.000 Intergenic MER117|DNA|hAT-Charlie -82125 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA chr6-161 chr6 143450537 143450781 + 24.2 0.000 promoter-TSS (NM_182503) promoter-TSS (NM_182503) 36 NM_182503 134637 Hs.709561 NM_182503 ENSG00000189007 ADAT2 DEADC1|TAD2|dJ20N2|dJ20N2.1 adenosine deaminase tRNA specific 2 protein-coding chr8-45 chr8 133571943 133572187 + 24.2 0.000 promoter-TSS (NM_173344) promoter-TSS (NM_173344) -178 NM_173344 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr4-267 chr4 83284655 83284899 + 24.2 0.000 promoter-TSS (NM_001358921) promoter-TSS (NM_001358921) 18 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr3-674 chr3 141412215 141412459 + 24.2 0.000 intron (NM_001080412, intron 7 of 7) intron (NM_001080412, intron 7 of 7) 9988 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr19-1187 chr19 10086087 10086331 + 24.2 0.000 promoter-TSS (NM_018381) promoter-TSS (NM_018381) -108 NM_018381 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr10-272 chr10 118755019 118755263 + 24.2 0.000 promoter-TSS (NM_153810) promoter-TSS (NM_153810) -171 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding chr10-1083 chr10 4498560 4498804 + 24.2 0.000 Intergenic Intergenic 92213 NR_108056 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA chr15-197 chr15 40108815 40109059 + 24.2 0.000 promoter-TSS (NM_001003943) promoter-TSS (NM_001003943) -58 NM_001003943 90427 Hs.591104 NM_033503 ENSG00000104081 BMF - Bcl2 modifying factor protein-coding chr2-529 chr2 218217605 218217849 + 24.2 0.000 intron (NM_152862, intron 2 of 10) G-rich|Low_complexity|Low_complexity 330 NM_005731 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr17-660 chr17 79173902 79174146 + 24.2 0.000 intron (NM_001350453, intron 3 of 13) intron (NM_001350453, intron 3 of 13) 99087 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-1358 chr1 84996696 84996940 + 24.2 0.000 exon (NM_153259, exon 1 of 14) exon (NM_153259, exon 1 of 14) 295 NM_001330647 255231 Hs.591446 NM_153259 ENSG00000153898 MCOLN2 TRP-ML2|TRPML2 mucolipin 2 protein-coding chr12-1251 chr12 122183028 122183272 + 24.2 0.000 promoter-TSS (NM_001098519) promoter-TSS (NM_001098519) 27 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr2-1539 chr2 196068873 196069117 + 24.2 0.000 promoter-TSS (NM_018897) promoter-TSS (NM_018897) -158 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr1-1534 chr1 102897575 102897819 + 24.2 0.000 intron (NM_001854, intron 57 of 66) intron (NM_001854, intron 57 of 66) 210799 NM_001190709 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding chr9-1388 chr9 134594213 134594457 + 24.2 0.000 Intergenic Intergenic -47470 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr2-639 chr2 192035839 192036083 + 24.2 0.000 intron (NM_001305134, intron 5 of 9) intron (NM_001305134, intron 5 of 9) 158972 NM_016192 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chr1-895 chr1 218496702 218496946 + 24.2 0.000 intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) -13271 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr19-1555 chr19 18638377 18638621 + 24.2 0.000 intron (NM_001345985, intron 1 of 2) intron (NM_001345985, intron 1 of 2) 1471 NM_001345984 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr6-411 chr6 108080451 108080695 + 24.2 0.000 Intergenic L1PBa1|LINE|L1 -5832 NM_014028 28962 Hs.226780 NM_014028 ENSG00000081087 OSTM1 GIPN|GL|HSPC019|OPTB5 osteoclastogenesis associated transmembrane protein 1 protein-coding chr20-144 chr20 33732228 33732472 + 24.2 0.000 intron (NM_001282933, intron 1 of 14) CpG 354 NM_001282933 84905 Hs.516989 NM_032819 ENSG00000131061 ZNF341 HIES3 zinc finger protein 341 protein-coding chr4-842 chr4 140610054 140610298 + 24.2 0.000 Intergenic Intergenic 32904 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr6-204 chr6 42979022 42979266 + 24.2 0.000 promoter-TSS (NR_133009) promoter-TSS (NR_133009) 37 NM_000287 5190 Hs.656425 NM_000287 ENSG00000124587 PEX6 HMLR2|PAF-2|PAF2|PBD4A|PDB4B|PXAAA1 peroxisomal biogenesis factor 6 protein-coding chr22-579 chr22 37345922 37346166 + 24.2 0.000 intron (NR_110512, intron 1 of 2) MIRb|SINE|MIR 8795 NR_110515 100506271 Hs.220558 NR_110515 ENSG00000237862 LOC100506271 - uncharacterized LOC100506271 ncRNA chr2-1201 chr2 20675067 20675311 + 24.2 0.000 3' UTR (NM_182828, exon 2 of 2) 3' UTR (NM_182828, exon 2 of 2) 8045 NM_182828 151449 Hs.447688 NM_182828 ENSG00000143869 GDF7 BMP12 growth differentiation factor 7 protein-coding chr11-678 chr11 96200358 96200602 + 24.2 0.000 intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -140958 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA chr1-784 chr1 183234855 183235099 + 24.2 0.000 intron (NM_005562, intron 15 of 22) intron (NM_005562, intron 15 of 22) 48713 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr3-1067 chr3 185732999 185733243 + 24.2 0.000 intron (NR_138486, intron 2 of 15) intron (NR_138486, intron 2 of 15) 19869 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr2-1792 chr2 111160744 111160988 + 24.2 0.000 intron (NM_001204109, intron 3 of 3) intron (NM_001204109, intron 3 of 3) 39952 NM_001204111 10018 Hs.469658 NM_006538 ENSG00000153094 BCL2L11 BAM|BIM|BOD BCL2 like 11 protein-coding chrX-116 chrX 7148417 7148661 + 24.2 0.000 promoter-TSS (NM_001135565) promoter-TSS (NM_001135565) -386 NM_001178136 8226 Hs.185910 NM_012080 ENSG00000130021 PUDP DXF68S1E|FAM16AX|GS1|HDHD1|HDHD1A pseudouridine 5'-phosphatase protein-coding chr9-383 chr9 17005089 17005333 + 24.2 0.000 Intergenic Intergenic -129829 NM_001365029 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr17-80 chr17 51785051 51785295 + 24.2 0.000 intron (NM_001082533, intron 4 of 9) L1MA2|LINE|L1 349746 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr19-397 chr19 36068942 36069186 + 24.2 0.000 intron (NM_001083961, intron 7 of 31) SVA_C|Retroposon|SVA 14167 NM_001083961 284403 Hs.116244 NM_173636 ENSG00000075702 WDR62 C19orf14|MCPH2 WD repeat domain 62 protein-coding chr19-833 chr19 49512428 49512672 + 24.2 0.000 promoter-TSS (NM_001136019) promoter-TSS (NM_001136019) -111 NM_001136019 2217 Hs.111903 NM_004107 ENSG00000104870 FCGRT FCRN|alpha-chain Fc fragment of IgG receptor and transporter protein-coding chr5-921 chr5 127871806 127872050 + 24.2 0.000 intron (NM_001317938, intron 5 of 6) intron (NM_001317938, intron 5 of 6) 168539 NM_001317938 728586 Hs.582532 NM_001317938 ENSG00000230561 CCDC192 LINC01183 coiled-coil domain containing 192 protein-coding chr8-592 chr8 144434910 144435154 + 24.2 0.000 promoter-TSS (NR_109770) promoter-TSS (NR_109770) -136 NR_109770 100287098 Hs.459376 NR_109770 TONSL-AS1 - TONSL antisense RNA 1 ncRNA chr10-694 chr10 124917547 124917791 + 24.2 0.000 Intergenic Intergenic -24454 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr2-374 chr2 197515789 197516033 + 24.2 0.000 promoter-TSS (NM_001204094) promoter-TSS (NM_001204094) -155 NM_015387 25843 Hs.633165 NM_015387 ENSG00000115540 MOB4 2C4D|CGI-95|MOB1|MOB3|MOBKL3|PHOCN|PREI3 MOB family member 4, phocein protein-coding chr3-1332 chr3 64711601 64711845 + 24.2 0.000 intron (NR_038264, intron 1 of 5) MamSINE1|SINE|tRNA-RTE -23723 NM_182920 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding chr14-734 chr14 67567157 67567401 + 24.2 0.000 intron (NM_020715, intron 7 of 28) intron (NM_020715, intron 7 of 28) 32989 NM_004569 5283 Hs.553497 NM_004569 ENSG00000100564 PIGH GPI-H phosphatidylinositol glycan anchor biosynthesis class H protein-coding chr19-222 chr19 1260693 1260937 + 24.2 0.000 Intergenic CpG -8453 NM_001280 1153 Hs.618145 NM_001280 ENSG00000099622 CIRBP CIRP cold inducible RNA binding protein protein-coding chr3-1030 chr3 143508226 143508470 + 24.2 0.000 intron (NM_173653, intron 9 of 15) intron (NM_173653, intron 9 of 15) 166102 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr17-1235 chr17 7931815 7932059 + 24.2 0.000 promoter-TSS (NM_001037144) promoter-TSS (NM_001037144) 9 NR_030684 58485 Hs.24379 NM_021210 ENSG00000170043 TRAPPC1 BET5|MUM2 trafficking protein particle complex 1 protein-coding chr7-467 chr7 65770624 65770868 + 24.2 0.000 promoter-TSS (NR_038378) promoter-TSS (NR_038378) 64 NR_038378 441242 Hs.373941 NM_001013464 ENSG00000272693 LOC441242 - uncharacterized LOC441242 ncRNA chr6-1027 chr6 87106139 87106383 + 24.2 0.000 Intergenic Intergenic -11155 NM_001252383 1081 Hs.119689 NM_000735 ENSG00000135346 CGA CG-ALPHA|FSHA|GPA1|GPHA1|GPHa|HCG|LHA|TSHA glycoprotein hormones, alpha polypeptide protein-coding chr3-292 chr3 148991518 148991762 + 24.2 0.000 5' UTR (NM_001184721, exon 1 of 6) 5' UTR (NM_001184721, exon 1 of 6) 232 NM_001184720 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr7-569 chr7 64794536 64794780 + 24.2 0.000 intron (NR_160268, intron 1 of 2) CpG 230 NR_073391 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding chr1-1875 chr1 172918014 172918258 + 24.2 0.000 Intergenic Intergenic 132827 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding chr1-956 chr1 161173040 161173284 + 24.2 0.000 intron (NM_001199873, intron 6 of 7) intron (NM_001199873, intron 6 of 7) 4345 NM_003779 8703 Hs.321231 NM_003779 ENSG00000158850 B4GALT3 beta4Gal-T3 beta-1,4-galactosyltransferase 3 protein-coding chr18-222 chr18 12515703 12515947 + 24.2 0.000 intron (NM_020148, intron 4 of 15) LTR16|LTR|ERVL 83051 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA chr6-857 chr6 138572508 138572752 + 24.2 0.000 promoter-TSS (NM_020464) promoter-TSS (NM_020464) -61 NM_020464 57224 Hs.652741 NM_020464 ENSG00000135540 NHSL1 C6orf63 NHS like 1 protein-coding chr2-754 chr2 72994503 72994747 + 24.2 0.000 intron (NR_138476, intron 9 of 14) intron (NR_138476, intron 9 of 14) 64547 NM_001330406 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr17-593 chr17 14309421 14309665 + 24.2 0.000 intron (NR_130138, intron 1 of 2) CpG 5803 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA chr5-356 chr5 163586647 163586891 + 24.2 0.000 Intergenic L1MEd|LINE|L1 81150 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr13-509 chr13 98730867 98731111 + 24.2 0.000 intron (NM_005073, intron 1 of 22) LTR33|LTR|ERVL 21683 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr8-489 chr8 40153398 40153642 + 24.2 0.000 promoter-TSS (NM_020130) promoter-TSS (NM_020130) 38 NM_020130 56892 Hs.591849 NM_020130 ENSG00000176907 TCIM C8orf4|TC-1|TC1 transcriptional and immune response regulator protein-coding chr5-411 chr5 35343514 35343758 + 24.2 0.000 Intergenic THE1B|LTR|ERVL-MaLR -113149 NM_000949 5618 Hs.368587 NM_000949 ENSG00000113494 PRLR HPRL|MFAB|RI-PRLR|hPRLrI prolactin receptor protein-coding chr9-521 chr9 87381537 87381781 + 24.2 0.000 Intergenic Intergenic -115569 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr10-772 chr10 136209 136453 + 24.2 0.000 5' UTR (NM_001370102, exon 1 of 15) 5' UTR (NM_001370102, exon 1 of 15) 522 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr12-329 chr12 51172942 51173186 + 24.2 0.000 promoter-TSS (NM_001173452) promoter-TSS (NM_001173452) 71 NM_005653 7024 Hs.48849 NM_005653 ENSG00000135457 TFCP2 LBP1C|LSF|LSF1D|SEF|TFCP2C transcription factor CP2 protein-coding chr10-639 chr10 49563104 49563348 + 24.2 0.000 Intergenic ERVL-B4-int|LTR|ERVL -23688 NM_001277059 2074 Hs.49063 NM_000124 ENSG00000225830 ERCC6 ARMD5|CKN2|COFS|COFS1|CSB|CSB-PGBD3|POF11|RAD26|UVSS1 ERCC excision repair 6, chromatin remodeling factor protein-coding chr2-328 chr2 231604479 231604723 + 24.2 0.000 Intergenic CpG 11737 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr17-721 chr17 81533167 81533411 + 24.2 0.000 intron (NM_012418, intron 1 of 4) intron (NM_012418, intron 1 of 4) 4912 NM_001077182 25794 Hs.118555 NM_012418 ENSG00000186765 FSCN2 RFSN|RP30 fascin actin-bundling protein 2, retinal protein-coding chr8-775 chr8 117847593 117847837 + 24.2 0.000 intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) 73198 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr5-1097 chr5 128749477 128749721 + 24.2 0.000 Intergenic Intergenic -211354 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding chr1-759 chr1 29124816 29125060 + 24.2 0.000 Intergenic CpG-777 -1035 NM_001003682 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding chr13-140 chr13 41263350 41263594 + 24.2 0.000 5' UTR (NM_001354073, exon 4 of 15) 5' UTR (NM_001354073, exon 4 of 15) 104 NM_004294 9617 Hs.382176 NM_004294 ENSG00000120662 MTRF1 MRF1|MTTRF1|RF1 mitochondrial translation release factor 1 protein-coding chr1-1811 chr1 113237504 113237748 + 24.2 0.000 Intergenic LTR90A|LTR|LTR -31373 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr5-574 chr5 37464653 37464897 + 24.2 0.000 intron (NM_001345998, intron 7 of 17) LTR41|LTR|ERVL 85457 NM_018034 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding chr1-2462 chr1 100164333 100164577 + 24.2 0.000 intron (NM_144620, intron 3 of 9) MER5A1|DNA|hAT-Charlie 13818 NM_001256385 127495 Hs.44277 NM_144620 ENSG00000122477 LRRC39 - leucine rich repeat containing 39 protein-coding chr10-886 chr10 94042469 94042713 + 24.2 0.000 intron (NM_001288989, intron 2 of 32) intron (NM_001288989, intron 2 of 32) -46435 NM_001165979 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr8-658 chr8 97293463 97293707 + 24.0 0.000 intron (NR_125390, intron 2 of 2) intron (NR_125390, intron 2 of 2) -15657 NM_033512 85453 Hs.173094 NM_033512 ENSG00000180543 TSPYL5 - TSPY like 5 protein-coding chr14-326 chr14 73559751 73559995 + 24.0 0.000 promoter-TSS (NM_203309) promoter-TSS (NM_203309) -926 NM_001220484 399671 Hs.660774 NM_203309 ENSG00000187105 HEATR4 - HEAT repeat containing 4 protein-coding chr22-510 chr22 40955657 40955901 + 24.0 0.000 intron (NM_014248, intron 2 of 4) intron (NM_014248, intron 2 of 4) 4401 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding chr7-1256 chr7 32116400 32116644 + 24.0 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -45086 NM_001322055 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr15-188 chr15 80989798 80990042 + 24.0 0.000 promoter-TSS (NM_015154) promoter-TSS (NM_015154) -101 NR_126328 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr22-440 chr22 31682470 31682714 + 24.0 0.000 3' UTR (NM_173566, exon 9 of 9) 3' UTR (NM_173566, exon 9 of 9) -20028 NM_001326412 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr3-1493 chr3 187767537 187767781 + 24.0 0.000 Intergenic MIRc|SINE|MIR -22191 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr20-673 chr20 63702723 63702967 + 24.0 0.000 intron (NR_051958, intron 4 of 6) intron (NR_051958, intron 4 of 6) -4597 NM_001083113 84619 Hs.590868 NM_032527 ENSG00000197114 ZGPAT GPATC6|GPATCH6|KIAA1847|ZC3H9|ZC3HDC9|ZIP zinc finger CCCH-type and G-patch domain containing protein-coding chr2-676 chr2 70087935 70088179 + 24.0 0.000 exon (NM_006196, exon 1 of 1) exon (NM_006196, exon 1 of 1) 580 NM_006196 5093 Hs.2853 NM_006196 ENSG00000169564 PCBP1 HEL-S-85|HNRPE1|HNRPX|hnRNP-E1|hnRNP-X poly(rC) binding protein 1 protein-coding chr15-371 chr15 51829631 51829875 + 24.0 0.000 promoter-TSS (NM_014547) promoter-TSS (NM_014547) 100 NM_014547 29766 Hs.4998 NM_014547 ENSG00000138594 TMOD3 UTMOD tropomodulin 3 protein-coding chr8-561 chr8 42768616 42768860 + 24.0 0.000 promoter-TSS (NM_001199279) promoter-TSS (NM_001199279) 48 NM_004198 8973 Hs.103128 NM_004198 ENSG00000147434 CHRNA6 CHNRA6 cholinergic receptor nicotinic alpha 6 subunit protein-coding chr6-449 chr6 34609587 34609831 + 24.0 0.000 intron (NM_022758, intron 2 of 3) intron (NM_022758, intron 2 of 3) -53376 NM_001252294 25803 Hs.485158 NM_012391 ENSG00000124664 SPDEF PDEF|bA375E1.3 SAM pointed domain containing ETS transcription factor protein-coding chr1-414 chr1 42658183 42658427 + 24.0 0.000 promoter-TSS (NM_001330510) promoter-TSS (NM_001330510) -118 NM_001330510 10465 Hs.256639 NM_006347 ENSG00000171960 PPIH CYP-20|CYPH|SnuCyp-20|USA-CYP peptidylprolyl isomerase H protein-coding chr20-278 chr20 50795018 50795262 + 24.0 0.000 exon (NM_198799, exon 1 of 5) exon (NM_198799, exon 1 of 5) 246 NM_198799 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr1-1020 chr1 38941300 38941544 + 24.0 0.000 intron (NM_017821, intron 1 of 7) intron (NM_017821, intron 1 of 7) 408 NM_017821 54933 Hs.524626 NM_017821 ENSG00000158315 RHBDL2 RRP2 rhomboid like 2 protein-coding chr9-1085 chr9 92278068 92278312 + 24.0 0.000 intron (NR_073446, intron 7 of 32) intron (NR_073446, intron 7 of 32) 14357 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr10-1042 chr10 104216244 104216488 + 24.0 0.000 intron (NM_025145, intron 3 of 37) LTR16E2|LTR|ERVL 2517 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chr1-2569 chr1 178048469 178048713 + 24.0 0.000 Intergenic MIR|SINE|MIR -10584 NR_151483 730102 Hs.733192 NR_037167 ENSG00000242193 CRYZL2P - crystallin zeta like 2, pseudogene pseudo chr17-352 chr17 68019883 68020127 + 24.0 0.000 Intergenic CpG -15730 NM_002266 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr6-708 chr6 101545254 101545498 + 24.0 0.000 intron (NM_001166247, intron 1 of 16) Charlie16a|DNA|hAT-Charlie 146391 NM_175768 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr2-1006 chr2 179377189 179377433 + 24.0 0.000 Intergenic L1PA16|LINE|L1 -112479 NM_178123 91404 Hs.30977 NM_178123 ENSG00000187231 SESTD1 SOLO SEC14 and spectrin domain containing 1 protein-coding chr3-931 chr3 22152944 22153188 + 24.0 0.000 Intergenic Intergenic 195927 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr12-1273 chr12 124914922 124915166 + 24.0 0.000 promoter-TSS (NR_049820) promoter-TSS (NR_049820) -394 NM_021009 7316 Hs.520348 NM_021009 ENSG00000150991 UBC HMG20 ubiquitin C protein-coding chr2-476 chr2 220499285 220499529 + 24.0 0.000 Intergenic Intergenic -592842 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-296 chr6 151060249 151060493 + 24.0 0.000 intron (NM_001350486, intron 26 of 27) L2b|LINE|L2 -42304 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA chr8-407 chr8 101098524 101098768 + 24.0 0.000 Intergenic L2a|LINE|L2 46592 NR_033962 441374 Hs.652045 NR_033962 ENSG00000248599 FLJ42969 - uncharacterized LOC441374 ncRNA chr12-815 chr12 30793005 30793249 + 24.0 0.000 Intergenic Intergenic -2554 NR_040245 100287314 Hs.355210 NR_040245 LINC00941 lncRNA-MUF long intergenic non-protein coding RNA 941 ncRNA chr6-399 chr6 52664356 52664600 + 24.0 0.000 promoter-TSS (NR_024403) promoter-TSS (NR_024403) 77 NR_024405 730101 Hs.7921 NR_024403 ENSG00000216775 LOC730101 - uncharacterized LOC730101 ncRNA chr15-355 chr15 42092222 42092466 + 24.0 0.000 intron (NM_178034, intron 1 of 19) intron (NM_178034, intron 1 of 19) 2218 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr1-878 chr1 160205449 160205693 + 24.0 0.000 non-coding (NR_123725, exon 3 of 5) non-coding (NR_123725, exon 3 of 5) 187 NM_001297576 8682 Hs.517216 NM_003768 ENSG00000162734 PEA15 HMAT1|HUMMAT1H|MAT1|MAT1H|PEA-15|PED|PED-PEA15|PED/PEA15 proliferation and apoptosis adaptor protein 15 protein-coding chr2-1383 chr2 219991213 219991457 + 24.0 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -84770 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-361 chr6 131949974 131950218 + 24.0 0.000 exon (NM_001901, exon 4 of 5) exon (NM_001901, exon 4 of 5) 1276 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr1-2294 chr1 23802652 23802896 + 24.0 0.000 intron (NM_000191, intron 8 of 8) intron (NM_000191, intron 8 of 8) -2020 NM_001008216 2582 Hs.632380 NM_000403 ENSG00000117308 GALE SDR1E1 UDP-galactose-4-epimerase protein-coding chr5-314 chr5 122774999 122775243 + 24.0 0.000 promoter-TSS (NM_003100) promoter-TSS (NM_003100) 41 NM_003100 6643 Hs.125352 NM_003100 ENSG00000205302 SNX2 TRG-9 sorting nexin 2 protein-coding chr8-940 chr8 109753103 109753347 + 24.0 0.000 Intergenic L3|LINE|CR1 -61434 NM_001099744 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding chr17-296 chr17 77445150 77445394 + 24.0 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) -5477 NM_001113496 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr11-662 chr11 64688676 64688920 + 24.0 0.000 intron (NM_138732, intron 4 of 19) intron (NM_138732, intron 4 of 19) 34390 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr2-1569 chr2 232013670 232013914 + 24.0 0.000 intron (NR_046477, intron 1 of 18) intron (NR_046477, intron 1 of 18) 52079 NM_001257281 129563 Hs.732236 NM_152383 ENSG00000144535 DIS3L2 FAM6A|PRLMNS|hDIS3L2 DIS3 like 3'-5' exoribonuclease 2 protein-coding chr11-148 chr11 68890056 68890300 + 24.0 0.000 Intergenic Intergenic 13654 NM_181515 219927 Hs.503047 NM_181512 ENSG00000197345 MRPL21 L21mt|MRP-L21 mitochondrial ribosomal protein L21 protein-coding chr13-434 chr13 30430180 30430424 + 24.0 0.000 TTS (NM_001355247) TTS (NM_001355247) 7809 NM_001355247 171222 NM_001355247 ENSG00000236444 UBE2L5 UBCH7N2|UBE2L5P ubiquitin conjugating enzyme E2 L5 protein-coding chr10-163 chr10 132308254 132308498 + 24.0 0.000 promoter-TSS (NM_173575) promoter-TSS (NM_173575) -426 NM_173575 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr5-445 chr5 14145266 14145510 + 24.0 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 2046 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr3-709 chr3 37924739 37924983 + 24.0 0.000 intron (NM_001008392, intron 1 of 7) intron (NM_001008392, intron 1 of 7) -44543 NR_029499 407015 NR_029499 ENSG00000199075 MIR26A1 MIR26A|MIRN26A1|mir-26a-1 microRNA 26a-1 ncRNA chr5-312 chr5 98929543 98929787 + 24.0 0.000 promoter-TSS (NR_157078) promoter-TSS (NR_157078) 49 NR_157078 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr16-707 chr16 8884764 8885008 + 24.0 0.000 Intergenic AluSz|SINE|Alu -15874 NM_001278260 23589 Hs.632184 NM_014316 ENSG00000153048 CARHSP1 CRHSP-24|CRHSP24|CSDC1 calcium regulated heat stable protein 1 protein-coding chr9-269 chr9 137236527 137236771 + 24.0 0.000 TTS (NM_080877) TTS (NM_080877) -4638 NM_006088 10383 Hs.433615 NM_006088 ENSG00000188229 TUBB4B Beta2|LCAEOD|TUBB2|TUBB2C tubulin beta 4B class IVb protein-coding chr16-817 chr16 49584808 49585052 + 24.0 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) -66345 NR_144553 1596 Hs.684517 NR_144553 ENSG00000260089 ADAM3B CYRN2 ADAM metallopeptidase domain 3B (pseudogene) pseudo chr17-702 chr17 60577190 60577434 + 24.0 0.000 non-coding (NR_126009, exon 3 of 4) non-coding (NR_126009, exon 3 of 4) 12766 NR_126009 388406 Hs.368309 NR_126009 ENSG00000267772 LINC01999 - long intergenic non-protein coding RNA 1999 ncRNA chr15-405 chr15 91055954 91056198 + 24.0 0.000 Intergenic Intergenic 33454 NR_110104 101926911 Hs.459366 NR_110104 ENSG00000214432 VPS33B-DT - VPS33B divergent transcript ncRNA chr12-568 chr12 25774833 25775077 + 24.0 0.000 Intergenic Tigger19b|DNA|TcMar-Tigger 99124 NR_036188 100422897 NR_036188 ENSG00000283603 MIR4302 - microRNA 4302 ncRNA chr7-1016 chr7 116801159 116801403 + 24.0 0.000 Intergenic Intergenic -61306 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr5-769 chr5 96562733 96562977 + 24.0 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) -99182 NM_001190442 831 Hs.436186 NM_001750 ENSG00000153113 CAST BS-17|PLACK calpastatin protein-coding chr5-1181 chr5 174571761 174572005 + 24.0 0.000 Intergenic Intergenic -152699 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr3-1359 chr3 105957834 105958078 + 24.0 0.000 Intergenic L2|LINE|L2 -88555 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr1-1801 chr1 97655167 97655411 + 24.0 0.000 intron (NM_000110, intron 8 of 22) intron (NM_000110, intron 8 of 22) -141632 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA chr2-1957 chr2 228545162 228545406 + 24.0 0.000 intron (NR_151716, intron 1 of 3) intron (NR_151716, intron 1 of 3) 66111 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr20-250 chr20 3820486 3820730 + 24.0 0.000 promoter-TSS (NM_001204447) promoter-TSS (NM_001204447) 61 NM_018347 55317 Hs.104806 NM_018347 ENSG00000125843 AP5S1 C20orf29 adaptor related protein complex 5 subunit sigma 1 protein-coding chr17-975 chr17 43368257 43368501 + 24.0 0.000 Intergenic Intergenic 20519 NR_027412 100130581 Hs.546897 NR_027412 ENSG00000188825 LINC00910 - long intergenic non-protein coding RNA 910 ncRNA chr17-96 chr17 81507282 81507526 + 24.0 0.000 Intergenic AluJb|SINE|Alu 5395 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr10-682 chr10 110851107 110851351 + 24.0 0.000 Intergenic Intergenic 19675 NR_026932 282997 Hs.599931 NR_026932 PDCD4-AS1 - PDCD4 antisense RNA 1 ncRNA chr16-527 chr16 50024962 50025206 + 24.0 0.000 promoter-TSS (NM_001281789) promoter-TSS (NM_001281789) -122 NR_104042 255919 Hs.59134 NM_153261 ENSG00000205423 CNEP1R1 C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein-coding chr1-1455 chr1 235821641 235821885 + 24.0 0.000 intron (NM_000081, intron 3 of 52) MER58C|DNA|hAT-Charlie 31297 NR_031718 100302139 NR_031718 ENSG00000222831 MIR1537 MIRN1537|hsa-mir-1537|mir-1537 microRNA 1537 ncRNA chr1-2381 chr1 51978785 51979029 + 24.0 0.000 intron (NM_002867, intron 1 of 4) intron (NM_002867, intron 1 of 4) 11793 NM_002867 5865 Hs.123072 NM_002867 ENSG00000169213 RAB3B - RAB3B, member RAS oncogene family protein-coding chr16-788 chr16 2787446 2787690 + 24.0 0.000 promoter-TSS (NM_152891) promoter-TSS (NM_152891) -861 NM_152891 260429 Hs.280658 NM_152891 ENSG00000103355 PRSS33 EOS serine protease 33 protein-coding chr3-718 chr3 46892372 46892616 + 24.0 0.000 intron (NM_001184744, intron 2 of 14) CpG 10245 NM_001184744 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr11-1444 chr11 33043756 33044000 + 24.0 0.000 exon (NM_018393, exon 2 of 10) exon (NM_018393, exon 2 of 10) 3863 NM_001145541 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr1-713 chr1 78371003 78371247 + 24.0 0.000 Intergenic (AGAT)n|Simple_repeat|Simple_repeat -119849 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr8-444 chr8 42458089 42458333 + 24.0 0.000 intron (NM_006749, intron 5 of 10) intron (NM_006749, intron 5 of 10) 43020 NM_001257180 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr3-304 chr3 37994089 37994333 + 24.0 0.000 promoter-TSS (NM_001370265) promoter-TSS (NM_001370265) 73 NM_001370264 50853 Hs.103665 NM_015873 ENSG00000136059 VILL - villin like protein-coding chr21-114 chr21 39348347 39348591 + 24.0 0.000 intron (NM_004965, intron 2 of 5) CpG-18403 619 NM_004965 3150 Hs.356285 NM_004965 ENSG00000205581 HMGN1 HMG14 high mobility group nucleosome binding domain 1 protein-coding chr4-281 chr4 187547473 187547717 + 24.0 0.000 intron (NR_110436, intron 2 of 2) intron (NR_110436, intron 2 of 2) -41982 NR_038931 339975 Hs.639361 NR_038931 LOC339975 - uncharacterized LOC339975 ncRNA chr1-457 chr1 3234538 3234782 + 24.0 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 106685 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr11-809 chr11 71813663 71813907 + 24.0 0.000 promoter-TSS (NR_073386) promoter-TSS (NR_073386) 74 NR_073386 285407 Hs.546711 NR_073386 ENSG00000248671 ALG1L9P - ALG1 like 9, pseudogene pseudo chr8-655 chr8 93957883 93958127 + 24.0 0.000 Intergenic Intergenic 41058 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr5-143 chr5 151696541 151696785 + 24.0 0.000 Intergenic Intergenic -9748 NM_001309443 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr7-268 chr7 64902989 64903233 + 24.0 0.000 promoter-TSS (NM_021148) promoter-TSS (NM_021148) -131 NR_003099 10793 Hs.520889 NM_021148 ENSG00000198039 ZNF273 HZF9 zinc finger protein 273 protein-coding chr2-1481 chr2 71379256 71379500 + 24.0 0.000 intron (NM_001252613, intron 8 of 27) Tigger7|DNA|TcMar-Tigger 47596 NM_014497 27332 Hs.434401 NM_014497 ENSG00000075292 ZNF638 NP220|ZFML|Zfp638 zinc finger protein 638 protein-coding chr11-418 chr11 14422382 14422626 + 24.0 0.000 Intergenic Intergenic -57998 NM_001177314 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr10-466 chr10 44935615 44935859 + 23.9 0.000 3' UTR (NM_001345926, exon 4 of 4) 3' UTR (NM_001345926, exon 4 of 4) 23952 NR_033842 220980 Hs.568801 NR_033842 ENSG00000224812 TMEM72-AS1 - TMEM72 antisense RNA 1 ncRNA chr3-671 chr3 129688327 129688571 + 23.9 0.000 5' UTR (NM_015008, exon 1 of 4) 5' UTR (NM_015008, exon 1 of 4) 283 NM_015008 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr22-377 chr22 23650018 23650262 + 23.9 0.000 intron (NR_024448, intron 11 of 11) intron (NR_024448, intron 11 of 11) -17819 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr16-375 chr16 87207670 87207914 + 23.9 0.000 Intergenic Intergenic -4323 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr2-1143 chr2 196123846 196124090 + 23.9 0.000 Intergenic LTR19C|LTR|ERV1 47610 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr1-884 chr1 180502390 180502634 + 23.9 0.000 promoter-TSS (NM_032360) promoter-TSS (NM_032360) 65 NM_032360 84320 Hs.200051 NM_032360 ENSG00000230124 ACBD6 - acyl-CoA binding domain containing 6 protein-coding chr4-392 chr4 1843004 1843248 + 23.9 0.000 intron (NM_012318, intron 2 of 13) MIR|SINE|MIR 13030 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chr2-199 chr2 240791811 240792055 + 23.9 0.000 intron (NM_004321, intron 2 of 46) intron (NM_004321, intron 2 of 46) 28286 NM_001330289 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr6-317 chr6 71420758 71421002 + 23.9 0.000 promoter-TSS (NR_121614) promoter-TSS (NR_121614) -135 NR_026807 79940 Hs.368337 NR_026807 ENSG00000233237 LINC00472 C6orf155|P53RRA long intergenic non-protein coding RNA 472 ncRNA chr10-1332 chr10 130190335 130190579 + 23.9 0.000 Intergenic CpG 54048 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr9-1232 chr9 82860291 82860535 + 23.9 0.000 Intergenic Intergenic 202729 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr14-99 chr14 73644778 73645022 + 23.9 0.000 promoter-TSS (NM_031427) promoter-TSS (NM_031427) -86 NM_031427 83544 Hs.271270 NM_031427 ENSG00000119661 DNAL1 C14orf168|CILD16|LC1 dynein axonemal light chain 1 protein-coding chr7-256 chr7 668110 668354 + 23.9 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 44292 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr5-725 chr5 14914903 14915147 + 23.9 0.000 Intergenic Tigger14a|DNA|TcMar-Tigger -43247 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding chr19-703 chr19 45098317 45098561 + 23.9 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 5260 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr8-288 chr8 23745106 23745350 + 23.9 0.000 Intergenic Intergenic -38630 NM_001136271 137814 Hs.532654 NM_001136271 ENSG00000180053 NKX2-6 CSX2|CTHM|NKX2F|NKX4-2 NK2 homeobox 6 protein-coding chr2-278 chr2 230411844 230412088 + 23.9 0.000 Intergenic Intergenic -4190 NM_001206702 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr8-298 chr8 47883076 47883320 + 23.9 0.000 intron (NM_001081640, intron 36 of 84) HAL1|LINE|L1 76938 NM_001081640 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr17-241 chr17 7844696 7844940 + 23.9 0.000 intron (NM_001080424, intron 1 of 21) CpG 4901 NM_001080424 23135 Hs.223678 NM_001080424 ENSG00000132510 KDM6B JMJD3 lysine demethylase 6B protein-coding chr7-750 chr7 77965511 77965755 + 23.9 0.000 Intergenic AluSc5|SINE|Alu 125503 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr2-731 chr2 23673382 23673626 + 23.9 0.000 intron (NM_052920, intron 5 of 13) (CA)n|Simple_repeat|Simple_repeat 253619 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr1-2036 chr1 47388565 47388809 + 23.9 0.000 intron (NR_126355, intron 3 of 4) intron (NR_126355, intron 3 of 4) -27598 NM_012186 2301 Hs.112968 NM_012186 ENSG00000186790 FOXE3 AAT11|ASGD2|CTRCT34|FKHL12|FREAC8 forkhead box E3 protein-coding chr1-1002 chr1 19621309 19621553 + 23.9 0.000 intron (NR_033758, intron 2 of 4) intron (NR_033758, intron 2 of 4) 13624 NR_077246 644068 Hs.660760 NR_077246 RPS14P3 RPS14_1_16 ribosomal protein S14 pseudogene 3 pseudo chr9-948 chr9 121724978 121725222 + 23.9 0.000 intron (NM_032552, intron 3 of 16) intron (NM_032552, intron 3 of 16) -17685 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr12-949 chr12 45337037 45337281 + 23.9 0.000 intron (NM_001025356, intron 3 of 19) Tigger3b|DNA|TcMar-Tigger 44469 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr5-104 chr5 90409802 90410046 + 23.9 0.000 promoter-TSS (NM_004365) promoter-TSS (NM_004365) -76 NR_105024 731157 Hs.551062 NR_105024 ENSG00000255647 LOC731157 - uncharacterized LOC731157 ncRNA chr8-780 chr8 123466898 123467142 + 23.9 0.000 Intergenic L1ME4c|LINE|L1 50246 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr7-396 chr7 106065056 106065300 + 23.9 0.000 Intergenic Intergenic 47134 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr1-647 chr1 58785091 58785335 + 23.9 0.000 promoter-TSS (NR_034014) promoter-TSS (NR_034014) 62 NR_034014 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr13-145 chr13 52194303 52194547 + 23.9 0.000 promoter-TSS (NR_002816) promoter-TSS (NR_002816) 42 NR_051965 100887750 Hs.553878 NR_002816 ENSG00000243406 MRPS31P5 MRPS31P3 mitochondrial ribosomal protein S31 pseudogene 5 pseudo chr2-1469 chr2 48106649 48106893 + 23.9 0.000 Intergenic Intergenic -200978 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding chr4-843 chr4 140616124 140616368 + 23.9 0.000 Intergenic Intergenic 26834 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr9-317 chr9 134384100 134384344 + 23.9 0.000 intron (NM_001291920, intron 1 of 9) intron (NM_001291920, intron 1 of 9) 4811 NR_039816 100616236 NR_039816 ENSG00000263897 MIR4669 - microRNA 4669 ncRNA chr6-574 chr6 166567195 166567439 + 23.9 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -22627 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr9-279 chr9 124399619 124399863 + 23.9 0.000 intron (NM_002799, intron 5 of 7) intron (NM_002799, intron 5 of 7) 15701 NM_002799 5695 Hs.213470 NM_002799 ENSG00000136930 PSMB7 Z proteasome subunit beta 7 protein-coding chr15-110 chr15 40894386 40894630 + 23.9 0.000 promoter-TSS (NM_020857) promoter-TSS (NM_020857) 58 NM_020857 57617 Hs.23876 NM_020857 ENSG00000104142 VPS18 PEP3 VPS18 core subunit of CORVET and HOPS complexes protein-coding chr1-564 chr1 184051766 184052010 + 23.9 0.000 exon (NM_052965, exon 1 of 5) exon (NM_052965, exon 1 of 5) 158 NM_052965 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr7-1047 chr7 149233644 149233888 + 23.9 0.000 Intergenic AluSz|SINE|Alu -5885 NM_012256 7988 Hs.490510 NM_012256 ENSG00000170260 ZNF212 C2H2-150|ZNF182|ZNFC150 zinc finger protein 212 protein-coding chr5-829 chr5 167294929 167295173 + 23.9 0.000 intron (NM_001122679, intron 2 of 29) intron (NM_001122679, intron 2 of 29) -126650 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA chr2-439 chr2 32039779 32040023 + 23.9 0.000 promoter-TSS (NR_135587) promoter-TSS (NR_135587) -66 NM_032574 84661 Hs.531788 NM_032574 ENSG00000162961 DPY30 Cps25|HDPY-30|Saf19 dpy-30 histone methyltransferase complex regulatory subunit protein-coding chr11-1196 chr11 91163680 91163924 + 23.9 0.000 Intergenic Intergenic -294600 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA chr3-322 chr3 184319937 184320181 + 23.9 0.000 promoter-TSS (NM_004953) promoter-TSS (NM_004953) -204 NM_004953 1981 Hs.433750 NM_004953 ENSG00000114867 EIF4G1 EIF-4G1|EIF4F|EIF4G|EIF4GI|P220|PARK18 eukaryotic translation initiation factor 4 gamma 1 protein-coding chr22-482 chr22 31585544 31585788 + 23.9 0.000 intron (NM_001007467, intron 14 of 32) L2a|LINE|L2 35865 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr12-163 chr12 6568205 6568449 + 23.9 0.000 promoter-TSS (NM_001258309) promoter-TSS (NM_001258309) -36 NM_001258310 4839 Hs.534334 NM_006170 ENSG00000111641 NOP2 NOL1|NOP120|NSUN1|p120 NOP2 nucleolar protein protein-coding chr9-389 chr9 71910292 71910536 + 23.9 0.000 intron (NM_001025780, intron 1 of 3) intron (NM_001025780, intron 1 of 3) 831 NM_001025780 51104 Hs.380389 NM_016014 ENSG00000107362 ABHD17B C9orf77|CGI-67|FAM108B1 abhydrolase domain containing 17B protein-coding chr3-1487 chr3 184716795 184717039 + 23.9 0.000 intron (NR_160768, intron 2 of 4) intron (NR_160768, intron 2 of 4) 4674 NR_160768 107986163 NR_160768 LOC107986163 - uncharacterized LOC107986163 ncRNA chr2-1844 chr2 150631541 150631785 + 23.9 0.000 intron (NR_110244, intron 2 of 4) intron (NR_110244, intron 2 of 4) 2766 NR_110244 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA chr3-543 chr3 183636595 183636839 + 23.9 0.000 intron (NM_001349424, intron 2 of 7) CpG-20502 1094 NR_146169 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding chr20-666 chr20 63497584 63497828 + 23.9 0.000 exon (NM_001958, exon 2 of 8) exon (NM_001958, exon 2 of 8) 1377 NM_001958 1917 Hs.433839 NM_001958 ENSG00000101210 EEF1A2 EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL eukaryotic translation elongation factor 1 alpha 2 protein-coding chr13-519 chr13 101347273 101347517 + 23.9 0.000 intron (NM_001350749, intron 6 of 43) MamTip2|DNA|hAT-Tip100 69113 NM_001350748 259232 Hs.525146 NM_052867 ENSG00000102452 NALCN CLIFAHDD|CanIon|IHPRF|IHPRF1|INNFD|VGCNL1|bA430M15.1 sodium leak channel, non-selective protein-coding chr21-231 chr21 35059809 35060053 + 23.9 0.000 Intergenic L1PA17|LINE|L1 -10633 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr2-867 chr2 190820061 190820305 + 23.9 0.000 Intergenic Intergenic -60638 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr16-503 chr16 1445926 1446170 + 23.9 0.000 3' UTR (NM_001114331, exon 24 of 24) 3' UTR (NM_001114331, exon 24 of 24) -1559 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr1-1355 chr1 72623408 72623652 + 23.9 0.000 Intergenic LTR50|LTR|ERVL -340991 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding chr5-270 chr5 139637599 139637843 + 23.9 0.000 Intergenic CpG -9578 NM_001317201 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chrX-206 chrX 65703861 65704105 + 23.9 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 36329 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr11-1106 chr11 55702054 55702298 + 23.9 0.000 Intergenic L1M3e|LINE|L1 37009 NM_001004704 219432 Hs.511921 NM_001004704 ENSG00000181903 OR4C6 OR11-138 olfactory receptor family 4 subfamily C member 6 protein-coding chr4-1001 chr4 76301477 76301721 + 23.9 0.000 intron (NM_001242939, intron 6 of 6) intron (NM_001242939, intron 6 of 6) -4427 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding chr17-529 chr17 82205949 82206193 + 23.9 0.000 intron (NM_001367828, intron 1 of 16) intron (NM_001367828, intron 1 of 16) 6771 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr9-377 chr9 133558867 133559111 + 23.9 0.000 intron (NM_001145320, intron 11 of 18) intron (NM_001145320, intron 11 of 18) 21257 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr1-715 chr1 85577137 85577381 + 23.9 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 941 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr20-130 chr20 62466941 62467185 + 23.9 0.000 intron (NM_080473, intron 3 of 6) intron (NM_080473, intron 3 of 6) 8932 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr5-943 chr5 160030998 160031242 + 23.7 0.000 intron (NM_003314, intron 2 of 7) intron (NM_003314, intron 2 of 7) 21981 NM_003314 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding chr10-355 chr10 5944356 5944600 + 23.7 0.000 Intergenic PABL_B|LTR|ERV1 24450 NM_001351096 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr1-2618 chr1 203663965 203664209 + 23.7 0.000 intron (NM_001365784, intron 1 of 20) MIRc|SINE|MIR 36150 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr2-652 chr2 217927814 217928058 + 23.7 0.000 intron (NM_022648, intron 1 of 32) intron (NM_022648, intron 1 of 32) -7700 NM_001308022 7145 Hs.471381 NM_022648 ENSG00000079308 TNS1 MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS tensin 1 protein-coding chr17-788 chr17 51757187 51757431 + 23.7 0.000 intron (NM_001082533, intron 4 of 9) intron (NM_001082533, intron 4 of 9) 321882 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA chr2-925 chr2 37156267 37156511 + 23.7 0.000 intron (NM_002759, intron 1 of 16) intron (NM_002759, intron 1 of 16) 591 NM_001135651 5610 Hs.131431 NM_002759 ENSG00000055332 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2 alpha kinase 2 protein-coding chr1-876 chr1 156711310 156711554 + 23.7 0.000 Intergenic Intergenic -5616 NM_001199723 1382 Hs.405662 NM_001878 ENSG00000143320 CRABP2 CRABP-II|RBP6 cellular retinoic acid binding protein 2 protein-coding chr22-241 chr22 32723566 32723810 + 23.7 0.000 intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -77128 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr12-655 chr12 56795548 56795792 + 23.7 0.000 Intergenic LTR12C|LTR|ERV1 32346 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding chr10-643 chr10 71333783 71334027 + 23.7 0.000 intron (NR_033414, intron 2 of 3) intron (NR_033414, intron 2 of 3) 14646 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr5-785 chr5 133265733 133265977 + 23.7 0.000 intron (NM_015082, intron 6 of 15) intron (NM_015082, intron 6 of 15) 161851 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr17-716 chr17 80963908 80964152 + 23.7 0.000 intron (NM_020761, intron 33 of 33) CpG 7183 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr17-308 chr17 4834231 4834475 + 23.7 0.000 intron (NM_015716, intron 1 of 30) intron (NM_015716, intron 1 of 30) 1013 NM_001024937 50488 Hs.443417 NM_015716 ENSG00000141503 MINK1 B55|MAP4K6|MINK|YSK2|ZC3 misshapen like kinase 1 protein-coding chr16-639 chr16 25256680 25256924 + 23.7 0.000 exon (NM_001012981, exon 1 of 7) exon (NM_001012981, exon 1 of 7) 1043 NM_001012981 342357 Hs.513451 NM_001012981 ENSG00000155592 ZKSCAN2 ZNF694|ZSCAN31|ZSCAN34 zinc finger with KRAB and SCAN domains 2 protein-coding chr6-536 chr6 106339407 106339651 + 23.7 0.000 Intergenic Intergenic -13709 NM_001286108 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding chr14-173 chr14 69153032 69153276 + 23.7 0.000 promoter-TSS (NM_001284206) promoter-TSS (NM_001284206) -35 NM_003861 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr1-2022 chr1 36401251 36401495 + 23.7 0.000 Intergenic LTR2752|LTR|ERV1 -3465 NM_032881 84967 Hs.603131 NM_032881 ENSG00000181817 LSM10 MST074|MSTP074 LSM10, U7 small nuclear RNA associated protein-coding chr8-304 chr8 106083101 106083345 + 23.7 0.000 Intergenic Intergenic -22720 NR_125797 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr2-1283 chr2 96202399 96202643 + 23.7 0.000 intron (NM_020151, intron 1 of 7) intron (NM_020151, intron 1 of 7) -5895 NR_046322 285033 Hs.58648 NM_001037228 STARD7-AS1 - STARD7 antisense RNA 1 ncRNA chr8-714 chr8 144255765 144256009 + 23.7 0.000 intron (NM_001288814, intron 33 of 41) intron (NM_001288814, intron 33 of 41) 6850 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA chr19-1209 chr19 16244038 16244282 + 23.7 0.000 3' UTR (NM_001130524, exon 13 of 13) 3' UTR (NM_001130524, exon 13 of 13) 46249 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr14-636 chr14 68935014 68935258 + 23.7 0.000 intron (NM_001102, intron 1 of 20) AluSp|SINE|Alu 44166 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr2-406 chr2 135052268 135052512 + 23.7 0.000 promoter-TSS (NM_012233) promoter-TSS (NM_012233) 98 NM_012233 22930 Hs.306327 NM_012233 ENSG00000115839 RAB3GAP1 P130|RAB3GAP|RAB3GAP130|WARBM1 RAB3 GTPase activating protein catalytic subunit 1 protein-coding chr11-329 chr11 15158655 15158899 + 23.7 0.000 intron (NM_001042536, intron 2 of 12) MIRb|SINE|MIR 9675 NM_001278313 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chr12-731 chr12 14327807 14328051 + 23.7 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -37703 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding chr6-676 chr6 37585615 37585859 + 23.7 0.000 Intergenic Intergenic -30315 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA chr1-1434 chr1 207828581 207828825 + 23.7 0.000 Intergenic Intergenic -6000 NR_135298 100128537 Hs.445414 NR_135298 MIR29B2CHG C1orf132 MIR29B2 and MIR29C host gene ncRNA chrX-482 chrX 70133197 70133441 + 23.7 0.000 promoter-TSS (NM_001551) promoter-TSS (NM_001551) -128 NM_001551 3476 Hs.496267 NM_001551 ENSG00000089289 IGBP1 ALPHA-4|IBP1 immunoglobulin binding protein 1 protein-coding chr5-851 chr5 177478919 177479163 + 23.7 0.000 Intergenic MIRb|SINE|MIR -5348 NM_004395 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr7-660 chr7 131604917 131605161 + 23.7 0.000 Intergenic Intergenic -48411 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr4-1113 chr4 182975720 182975964 + 23.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger -58365 NM_001351750 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr6-443 chr6 8435333 8435577 + 23.7 0.000 promoter-TSS (NR_038979) promoter-TSS (NR_038979) 90 NM_001370478 51000 Hs.285847 NM_015948 ENSG00000124786 SLC35B3 C6orf196|CGI-19|PAPST2 solute carrier family 35 member B3 protein-coding chr22-220 chr22 20243638 20243882 + 23.7 0.000 intron (NM_023004, intron 1 of 1) intron (NM_023004, intron 1 of 1) 5451 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr1-745 chr1 10510682 10510926 + 23.7 0.000 intron (NM_004565, intron 2 of 8) intron (NM_004565, intron 2 of 8) 35854 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr17-709 chr17 76276888 76277132 + 23.7 0.000 intron (NM_032134, intron 16 of 18) intron (NM_032134, intron 16 of 18) 11662 NM_182565 283991 Hs.744981 NM_182565 ENSG00000185262 UBALD2 FAM100B UBA like domain containing 2 protein-coding chr9-414 chr9 136760787 136761031 + 23.7 0.000 intron (NM_203347, intron 6 of 6) MLT1C|LTR|ERVL-MaLR -2366 NM_001345934 138307 Hs.323991 NM_178469 ENSG00000204001 LCN8 EP17|LCN5 lipocalin 8 protein-coding chr14-120 chr14 68977651 68977895 + 23.7 0.000 intron (NM_001102, intron 1 of 20) intron (NM_001102, intron 1 of 20) 1529 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr10-834 chr10 50418241 50418485 + 23.7 0.000 intron (NM_147156, intron 6 of 10) CpG -169753 NM_019893 56624 Hs.512645 NM_019893 ENSG00000188611 ASAH2 BCDase|HNAC1|LCDase|N-CDase|NCDase N-acylsphingosine amidohydrolase 2 protein-coding chr19-526 chr19 51338937 51339181 + 23.7 0.000 exon (NM_001163922, exon 5 of 10) exon (NM_001163922, exon 5 of 10) 3065 NM_001163922 147645 Hs.293236 NM_001163922 ENSG00000186806 VSIG10L - V-set and immunoglobulin domain containing 10 like protein-coding chr7-907 chr7 6257055 6257299 + 23.7 0.000 intron (NM_001367581, intron 1 of 13) intron (NM_001367581, intron 1 of 13) 15447 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr5-697 chr5 154862792 154863036 + 23.7 0.000 intron (NM_004779, intron 1 of 6) intron (NM_004779, intron 1 of 6) 4287 NM_001301086 9337 Hs.26703 NM_004779 ENSG00000155508 CNOT8 CAF1|CALIF|Caf1b|POP2|hCAF1 CCR4-NOT transcription complex subunit 8 protein-coding chr7-827 chr7 26156429 26156673 + 23.7 0.000 intron (NM_004289, intron 1 of 3) intron (NM_004289, intron 1 of 3) 4353 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding chr4-783 chr4 1230266 1230510 + 23.7 0.000 intron (NM_001012614, intron 3 of 9) intron (NM_001012614, intron 3 of 9) 18742 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr1-635 chr1 25743947 25744191 + 23.7 0.000 intron (NM_020379, intron 2 of 11) MIR3|SINE|MIR -56124 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr4-218 chr4 109560833 109561077 + 23.7 0.000 intron (NM_017918, intron 1 of 7) intron (NM_017918, intron 1 of 7) 709 NM_017918 55013 Hs.234149 NM_017918 ENSG00000005059 MCUB CCDC109B mitochondrial calcium uniporter dominant negative beta subunit protein-coding chr19-261 chr19 10194741 10194985 + 23.7 0.000 promoter-TSS (NM_001130823) promoter-TSS (NM_001130823) 90 NM_001379 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr12-722 chr12 3020395 3020639 + 23.7 0.000 intron (NM_201443, intron 6 of 10) intron (NM_201443, intron 6 of 10) -56838 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr19-1612 chr19 42184615 42184859 + 23.7 0.000 Intergenic Intergenic 32940 NR_073049 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr3-946 chr3 44338088 44338332 + 23.7 0.000 promoter-TSS (NM_001282913) promoter-TSS (NM_001282913) 81 NM_001282913 285343 Hs.55131 NM_173826 ENSG00000179152 TCAIM C3orf23|TOAG-1|TOAG1 T cell activation inhibitor, mitochondrial protein-coding chr1-677 chr1 3174875 3175119 + 23.7 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 47022 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-924 chr8 99034340 99034584 + 23.7 0.000 intron (NR_047582, intron 2 of 8) L1M4a2|LINE|L1 21196 NM_181661 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr11-407 chr11 320758 321002 + 23.7 0.000 promoter-TSS (NR_049759) promoter-TSS (NR_049759) -20 NR_049759 10410 Hs.374650 NM_021034 ENSG00000142089 IFITM3 1-8U|DSPA2b|IP15 interferon induced transmembrane protein 3 protein-coding chr6-570 chr6 158895461 158895705 + 23.7 0.000 intron (NR_160979, intron 2 of 2) intron (NR_160979, intron 2 of 2) 7106 NR_160979 100130967 Hs.32804 NM_001195032 C6orf99 - chromosome 6 open reading frame 99 ncRNA chr14-260 chr14 54606784 54607028 + 23.7 0.000 intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 39294 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr8-375 chr8 17847451 17847695 + 23.7 0.000 Intergenic MamRTE1|LINE|RTE-BovB -45994 NM_001363061 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding chr11-955 chr11 121655869 121656113 + 23.7 0.000 Intergenic Intergenic 203677 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding chr7-627 chr7 43647954 43648198 + 23.7 0.000 intron (NM_018224, intron 2 of 5) intron (NM_018224, intron 2 of 5) 64968 NM_004760 9263 Hs.709489 NM_004760 ENSG00000164543 STK17A DRAK1 serine/threonine kinase 17a protein-coding chr9-825 chr9 134243935 134244179 + 23.7 0.000 Intergenic Intergenic 51340 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr6-202 chr6 33672952 33673196 + 23.7 0.000 intron (NM_002224, intron 22 of 57) intron (NM_002224, intron 22 of 57) -25054 NR_037498 100500873 NR_037498 ENSG00000266509 MIR3934 - microRNA 3934 ncRNA KI270442.1-9 KI270442.1 177099 177343 + 23.7 0.000 NA NA NA NA chr22-267 chr22 37686288 37686532 + 23.7 0.000 promoter-TSS (NM_024313) promoter-TSS (NM_024313) 67 NM_024313 79159 Hs.632778 NM_024313 ENSG00000273899 NOL12 Nop25|dJ37E16.7 nucleolar protein 12 protein-coding chrX-345 chrX 153514013 153514257 + 23.7 0.000 Intergenic Intergenic -18670 NR_073156 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr21-102 chr21 38567810 38568054 + 23.7 0.000 intron (NR_111949, intron 3 of 4) intron (NR_111949, intron 3 of 4) 17013 NM_001243429 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr20-256 chr20 13009653 13009897 + 23.7 0.000 intron (NM_001349945, intron 2 of 12) intron (NM_001349945, intron 2 of 12) 803 NM_001349945 55304 Hs.425023 NM_018327 ENSG00000172296 SPTLC3 C20orf38|LCB 3|LCB2B|LCB3|SPT 3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b serine palmitoyltransferase long chain base subunit 3 protein-coding chr3-985 chr3 85308710 85308954 + 23.7 0.000 intron (NM_001167674, intron 1 of 9) intron (NM_001167674, intron 1 of 9) -76878 NR_049870 100847077 NR_049870 ENSG00000264084 MIR5688 - microRNA 5688 ncRNA chr5-667 chr5 83474407 83474651 + 23.7 0.000 intron (NM_001164098, intron 1 of 13) CpG 2785 NM_001126336 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding chr1-408 chr1 16984815 16985059 + 23.7 0.000 Intergenic Intergenic -3351 NM_001135247 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr11-277 chr11 62727381 62727625 + 23.7 0.000 promoter-TSS (NR_037946) promoter-TSS (NR_037946) -46 NM_001079559 221092 Hs.657058 NM_001079559 ENSG00000214753 HNRNPUL2 HNRPUL2|SAF-A2 heterogeneous nuclear ribonucleoprotein U like 2 protein-coding chr6-147 chr6 100881189 100881433 + 23.7 0.000 promoter-TSS (NM_001284271) promoter-TSS (NM_001284271) 18 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr1-2396 chr1 57165657 57165901 + 23.7 0.000 intron (NM_001353980, intron 5 of 5) MIRb|SINE|MIR -199639 NM_001278544 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr3-391 chr3 16663772 16664016 + 23.7 0.000 Intergenic Intergenic -58471 NM_001351 1618 Hs.131179 NM_001351 ENSG00000092345 DAZL DAZH|DAZL1|DAZLA|SPGYLA deleted in azoospermia like protein-coding chr12-331 chr12 56634923 56635167 + 23.7 0.000 intron (NM_001351156, intron 1 of 30) CpG 1314 NM_001351156 11176 Hs.314263 NM_013449 ENSG00000076108 BAZ2A TIP5|WALp3 bromodomain adjacent to zinc finger domain 2A protein-coding chr12-492 chr12 120630554 120630798 + 23.7 0.000 Intergenic Intergenic -9943 NM_001033677 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr9-910 chr9 91495529 91495773 + 23.7 0.000 Intergenic Intergenic -71025 NM_001289999 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr11-496 chr11 33015857 33016101 + 23.7 0.000 promoter-TSS (NM_139160) promoter-TSS (NM_139160) 101 NM_001077242 91614 Hs.280990 NM_139160 ENSG00000121690 DEPDC7 TR2|dJ85M6.4 DEP domain containing 7 protein-coding chr2-1163 chr2 231449974 231450218 + 23.7 0.000 Intergenic AluJb|SINE|Alu 5840 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr6-483 chr6 5287627 5287871 + 23.7 0.000 intron (NM_006567, intron 1 of 6) intron (NM_006567, intron 1 of 6) 26236 NM_006567 10667 Hs.484547 NM_006567 ENSG00000145982 FARS2 COXPD14|FARS1|HSPC320|PheRS|SPG77|mtPheRS phenylalanyl-tRNA synthetase 2, mitochondrial protein-coding chr10-1329 chr10 128116079 128116323 + 23.7 0.000 intron (NM_002417, intron 6 of 14) intron (NM_002417, intron 6 of 14) 10222 NM_002417 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chr1-1316 chr1 33338966 33339210 + 23.7 0.000 intron (NM_198040, intron 8 of 13) intron (NM_198040, intron 8 of 13) -6596 NR_037400 100500853 NR_037400 ENSG00000284154 MIR3605 mir-3605 microRNA 3605 ncRNA chr2-1615 chr2 17620928 17621172 + 23.7 0.000 intron (NM_001366805, intron 2 of 2) intron (NM_001366805, intron 2 of 2) 80354 NM_001366804 7447 Hs.444212 NM_003385 ENSG00000163032 VSNL1 HLP3|HPCAL3|HUVISL1|VILIP|VILIP-1 visinin like 1 protein-coding chr3-914 chr3 5023398 5023642 + 23.7 0.000 Intergenic Intergenic -43559 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr7-1117 chr7 73941805 73942049 + 23.7 0.000 Intergenic L1M4|LINE|L1 80768 NM_182504 135886 Hs.647026 NM_182504 ENSG00000175877 TMEM270 WBSCR28 transmembrane protein 270 protein-coding chr14-427 chr14 74605989 74606233 + 23.7 0.000 intron (NM_000428, intron 1 of 35) intron (NM_000428, intron 1 of 35) 6126 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr19-505 chr19 7535336 7535580 + 23.7 0.000 promoter-TSS (NM_001166114) promoter-TSS (NM_001166114) -259 NM_001166114 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr5-326 chr5 142324796 142325040 + 23.6 0.000 promoter-TSS (NM_001293289) promoter-TSS (NM_001293289) 103 NM_030964 81848 Hs.323308 NM_030964 ENSG00000187678 SPRY4 HH17 sprouty RTK signaling antagonist 4 protein-coding chr17-145 chr17 28743117 28743361 + 23.6 0.000 promoter-TSS (NM_004295) promoter-TSS (NM_004295) -772 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr11-201 chr11 11621940 11622184 + 23.6 0.000 promoter-TSS (NM_198516) promoter-TSS (NM_198516) -57 NM_001363464 374378 Hs.655152 NM_198516 ENSG00000110328 GALNT18 GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18 polypeptide N-acetylgalactosaminyltransferase 18 protein-coding chr11-565 chr11 61817006 61817250 + 23.6 0.000 promoter-TSS (NM_013402) promoter-TSS (NM_013402) -125 NM_013402 3992 Hs.503546 NM_013402 ENSG00000149485 FADS1 D5D|FADS6|FADSD5|LLCDL1|TU12 fatty acid desaturase 1 protein-coding chr2-1441 chr2 19121138 19121382 + 23.6 0.000 Intergenic Intergenic -94289 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr7-826 chr7 25835202 25835446 + 23.6 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -45205 NR_157808 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA chr12-176 chr12 106955791 106956035 + 23.6 0.000 promoter-TSS (NM_001319662) promoter-TSS (NM_001319662) 6 NM_152261 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr5-737 chr5 39138936 39139180 + 23.6 0.000 intron (NM_001243093, intron 5 of 18) intron (NM_001243093, intron 5 of 18) -64659 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr11-1217 chr11 118175262 118175506 + 23.6 0.000 intron (NM_004588, intron 1 of 3) intron (NM_004588, intron 1 of 3) 1255 NM_004588 6327 Hs.129783 NM_004588 ENSG00000149575 SCN2B ATFB14 sodium voltage-gated channel beta subunit 2 protein-coding chr12-592 chr12 109477297 109477541 + 23.6 0.000 promoter-TSS (NM_001317399) promoter-TSS (NM_001317399) -119 NM_001317399 83892 Hs.524731 NM_031954 ENSG00000110906 KCTD10 BTBD28|MSTP028|ULRO61|hBACURD3 potassium channel tetramerization domain containing 10 protein-coding chr10-634 chr10 46006439 46006683 + 23.6 0.000 3' UTR (NM_001145263, exon 10 of 10) 3' UTR (NM_001145263, exon 10 of 10) 12976 NM_001145262 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chrX-107 chrX 155612380 155612624 + 23.6 0.000 promoter-TSS (NM_001304990) promoter-TSS (NM_001304990) -63 NM_001304990 10251 Hs.381912 NM_005840 ENSG00000168939 SPRY3 spry-3 sprouty RTK signaling antagonist 3 protein-coding chr17-200 chr17 49361862 49362106 + 23.6 0.000 promoter-TSS (NR_110882) promoter-TSS (NR_110882) 266 NR_135579 22834 Hs.463375 NM_014897 ENSG00000198740 ZNF652 - zinc finger protein 652 protein-coding chr19-449 chr19 16025709 16025953 + 23.6 0.000 non-coding (NR_026828, exon 9 of 9) non-coding (NR_026828, exon 9 of 9) -7882 NR_024335 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr1-967 chr1 207620400 207620644 + 23.6 0.000 intron (NM_000573, intron 35 of 38) intron (NM_000573, intron 35 of 38) -24611 NM_175710 1379 Hs.628568 NM_175710 ENSG00000197721 CR1L - complement C3b/C4b receptor 1 like protein-coding chr8-233 chr8 71257814 71258058 + 23.6 0.000 intron (NM_001370335, intron 14 of 20) intron (NM_001370335, intron 14 of 20) 98770 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr22-230 chr22 46542307 46542551 + 23.6 0.000 Intergenic Intergenic -4809 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr5-563 chr5 9888637 9888881 + 23.6 0.000 intron (NR_027112, intron 2 of 12) intron (NR_027112, intron 2 of 12) 15065 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA chr20-339 chr20 46070572 46070816 + 23.6 0.000 intron (NM_001348148, intron 1 of 6) intron (NM_001348148, intron 1 of 6) 19268 NM_001348149 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding chr10-625 chr10 31698623 31698867 + 23.6 0.000 Intergenic Intergenic 210181 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr6-584 chr6 12602419 12602663 + 23.6 0.000 Intergenic MIR3|SINE|MIR -17137 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr9-1298 chr9 115730712 115730956 + 23.6 0.000 Intergenic Intergenic 13405 NR_109805 101928775 Hs.522362 NR_109805 ENSG00000228714 LOC101928775 - uncharacterized LOC101928775 ncRNA chr2-991 chr2 150340160 150340404 + 23.6 0.000 Intergenic Intergenic -83275 NR_146972 105373683 NR_146972 ENSG00000231420 LINC01817 - long intergenic non-protein coding RNA 1817 ncRNA chr3-1034 chr3 149648517 149648761 + 23.6 0.000 intron (NM_001348362, intron 5 of 9) L2b|LINE|L2 9386 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr3-1036 chr3 151501252 151501496 + 23.6 0.000 Intergenic MIRb|SINE|MIR -42665 NM_178822 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr1-541 chr1 31789359 31789603 + 23.6 0.000 TTS (NM_001281988) TTS (NM_001281988) -25141 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr11-1006 chr11 66970994 66971238 + 23.6 0.000 Intergenic Intergenic -4188 NM_001353554 254439 Hs.232604 NM_001136485 ENSG00000173237 C11orf86 - chromosome 11 open reading frame 86 protein-coding chr14-556 chr14 73724381 73724625 + 23.6 0.000 intron (NM_001367710, intron 9 of 12) intron (NM_001367710, intron 9 of 12) -10119 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr8-942 chr8 114879698 114879942 + 23.6 0.000 Intergenic Intergenic 788193 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr1-487 chr1 54581655 54581899 + 23.6 0.000 intron (NM_015547, intron 1 of 16) intron (NM_015547, intron 1 of 16) 33549 NM_015547 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr12-168 chr12 53047017 53047261 + 23.6 0.000 intron (NM_198316, intron 1 of 28) CpG 113 NM_198316 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chr5-400 chr5 171809017 171809261 + 23.6 0.000 Intergenic Intergenic 23267 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr1-669 chr1 246782333 246782577 + 23.6 0.000 Intergenic Intergenic -7162 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA chr1-1367 chr1 91383494 91383738 + 23.6 0.000 intron (NM_001017975, intron 6 of 38) intron (NM_001017975, intron 6 of 38) 21221 NM_001017975 164045 Hs.454818 NM_001017975 ENSG00000162669 HFM1 MER3|POF9|SEC63D1|Si-11|Si-11-6|helicase helicase for meiosis 1 protein-coding chr16-519 chr16 30669163 30669407 + 23.6 0.000 exon (NM_001105079, exon 18 of 18) exon (NM_001105079, exon 18 of 18) 10854 NM_001105079 64319 Hs.247186 NM_022452 ENSG00000156860 FBRS FBS|FBS1 fibrosin protein-coding KZ208915.1-2 KZ208915.1 1150505 1150749 + 23.6 0.000 NA NA NA NA chr14-237 chr14 58607950 58608194 + 23.6 0.000 Intergenic Intergenic -25996 NR_046093 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chr6-339 chr6 169452190 169452434 + 23.6 0.000 Intergenic CpG -198198 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding chr4-78 chr4 170026271 170026515 + 23.6 0.000 promoter-TSS (NM_001301647) promoter-TSS (NM_001301647) 2 NM_001301647 9848 Hs.593942 NM_021647 ENSG00000198948 MFAP3L NYD-sp9 microfibril associated protein 3 like protein-coding chr2-728 chr2 19989188 19989432 + 23.6 0.000 promoter-TSS (NR_110235) promoter-TSS (NR_110235) 795 NM_020779 57539 Hs.205427 NM_020779 ENSG00000118965 WDR35 CED2|IFT121|IFTA1|SRTD7 WD repeat domain 35 protein-coding chr1-2595 chr1 199090696 199090940 + 23.6 0.000 Intergenic MIR|SINE|MIR -57780 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA chr19-580 chr19 9768422 9768666 + 23.6 0.000 non-coding (NR_148544, exon 1 of 8) non-coding (NR_148544, exon 1 of 8) 194 NM_001077624 162993 Hs.665717 NM_001077624 ENSG00000196605 ZNF846 - zinc finger protein 846 protein-coding chr16-548 chr16 85029319 85029563 + 23.6 0.000 intron (NM_001286566, intron 1 of 11) intron (NM_001286566, intron 1 of 11) 1690 NM_014732 9764 Hs.301658 NM_014732 ENSG00000135709 KIAA0513 - KIAA0513 protein-coding chr14-343 chr14 100328911 100329155 + 23.6 0.000 exon (NM_001350877, exon 5 of 6) exon (NM_001350877, exon 5 of 6) 5694 NM_001350877 283600 Hs.108268 NM_207117 ENSG00000140107 SLC25A47 C14orf68|HDMCP|HMFN1655 solute carrier family 25 member 47 protein-coding chr5-531 chr5 54883622 54883866 + 23.6 0.000 Intergenic CpG 101849 NM_007036 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr5-1048 chr5 64612442 64612686 + 23.6 0.000 TTS (NM_001029875) TTS (NM_001029875) 36914 NM_001271890 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr11-572 chr11 64357198 64357442 + 23.6 0.000 3' UTR (NM_032251, exon 27 of 27) 3' UTR (NM_032251, exon 27 of 27) -1842 NM_001318361 8986 Hs.105584 NM_003942 ENSG00000162302 RPS6KA4 MSK2|RSK-B|S6K-alpha-4 ribosomal protein S6 kinase A4 protein-coding chr2-703 chr2 197909491 197909735 + 23.6 0.000 intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 105020 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding chr5-987 chr5 14265665 14265909 + 23.6 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 122445 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr10-713 chr10 404323 404567 + 23.6 0.000 intron (NM_014974, intron 9 of 36) AluSx3|SINE|Alu -224119 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr3-433 chr3 196503681 196503925 + 23.6 0.000 promoter-TSS (NM_152617) promoter-TSS (NM_152617) -35 NM_152617 165918 Hs.250648 NM_152617 ENSG00000163961 RNF168 hRNF168 ring finger protein 168 protein-coding chr11-746 chr11 67317548 67317792 + 23.6 0.000 promoter-TSS (NR_024469) promoter-TSS (NR_024469) -169 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr12-669 chr12 79407980 79408224 + 23.6 0.000 intron (NM_001291901, intron 8 of 9) intron (NM_001291901, intron 8 of 9) -11155 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr7-987 chr7 82870799 82871043 + 23.6 0.000 intron (NM_033026, intron 10 of 24) L1MA4|LINE|L1 291963 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr1-1098 chr1 204377943 204378187 + 23.6 0.000 Intergenic CpG -8346 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr1-892 chr1 211416398 211416642 + 23.6 0.000 intron (NR_026761, intron 4 of 5) CpG 33765 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr7-580 chr7 96709495 96709739 + 23.6 0.000 intron (NR_163953, intron 1 of 5) CpG 229 NM_001349702 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr16-501 chr16 546694 546938 + 23.6 0.000 intron (NM_005632, intron 3 of 13) intron (NM_005632, intron 3 of 13) 3539 NR_036137 100423037 NR_036137 ENSG00000266235 MIR3176 mir-3176 microRNA 3176 ncRNA chr19-543 chr19 10817580 10817824 + 23.6 0.000 promoter-TSS (NR_029586) promoter-TSS (NR_029586) -206 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr3-1412 chr3 134430768 134431012 + 23.6 0.000 Intergenic Intergenic -6937 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr12-477 chr12 85280473 85280717 + 23.6 0.000 intron (NM_006982, intron 1 of 3) CpG 375 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding chr12-414 chr12 53096415 53096659 + 23.6 0.000 Intergenic Intergenic -1130 NM_002178 3489 Hs.274313 NM_002178 ENSG00000167779 IGFBP6 IBP6 insulin like growth factor binding protein 6 protein-coding chr2-739 chr2 38462441 38462685 + 23.6 0.000 intron (NR_110259, intron 4 of 4) intron (NR_110259, intron 4 of 4) 31269 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr13-306 chr13 23979625 23979869 + 23.6 0.000 promoter-TSS (NM_001286792) promoter-TSS (NM_001286792) -55 NM_001286792 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding chr20-94 chr20 62415732 62415976 + 23.6 0.000 exon (NM_080833, exon 7 of 14) exon (NM_080833, exon 7 of 14) -8571 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr16-682 chr16 88792280 88792524 + 23.6 0.000 Intergenic Intergenic -7182 NM_001142864 9780 Hs.377001 NM_001142864 ENSG00000103335 PIEZO1 DHS|FAM38A|LMPH3|LMPHM6|Mib piezo type mechanosensitive ion channel component 1 protein-coding chr2-1159 chr2 222943868 222944112 + 23.6 0.000 3' UTR (NM_203372, exon 16 of 16) 3' UTR (NM_203372, exon 16 of 16) 82954 NM_001354158 2181 Hs.655772 NM_004457 ENSG00000123983 ACSL3 ACS3|FACL3|LACS 3|LACS3|PRO2194 acyl-CoA synthetase long chain family member 3 protein-coding chr19-1251 chr19 42111451 42111695 + 23.6 0.000 intron (NM_001207026, intron 5 of 12) L2b|LINE|L2 20873 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr12-588 chr12 77848198 77848442 + 23.6 0.000 intron (NM_001024383, intron 1 of 39) intron (NM_001024383, intron 1 of 39) 17426 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr15-612 chr15 33762078 33762322 + 23.6 0.000 intron (NM_001243996, intron 60 of 102) L1PA7|LINE|L1 -206297 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr2-1128 chr2 151774559 151774803 + 23.6 0.000 Intergenic Intergenic -40194 NM_001164507 4703 Hs.588655 NM_004543 ENSG00000183091 NEB NEB177D|NEM2 nebulin protein-coding chr2-1830 chr2 140579886 140580130 + 23.6 0.000 intron (NM_018557, intron 43 of 90) intron (NM_018557, intron 43 of 90) 6677 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr12-351 chr12 117686915 117687159 + 23.6 0.000 intron (NM_173598, intron 4 of 19) MIR3|SINE|MIR 281953 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr3-527 chr3 53220100 53220344 + 23.6 0.000 Intergenic Intergenic 35800 NM_001064 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr3-387 chr3 9917041 9917285 + 23.6 0.000 promoter-TSS (NM_001367278) promoter-TSS (NM_001367278) 65 NM_001367280 84818 Hs.129959 NM_032732 ENSG00000163702 IL17RC CANDF9|IL17-RL|IL17RL interleukin 17 receptor C protein-coding chr11-1055 chr11 3153441 3153685 + 23.6 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 11747 NM_001144063 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr9-1129 chr9 130952543 130952787 + 23.6 0.000 Intergenic Intergenic -13418 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr1-762 chr1 32107748 32107992 + 23.6 0.000 promoter-TSS (NM_012316) promoter-TSS (NM_012316) -186 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding chr16-619 chr16 2123315 2123559 + 23.6 0.000 intron (NM_000296, intron 1 of 45) intron (NM_000296, intron 1 of 45) -9682 NR_039741 100616258 NR_039741 ENSG00000265867 MIR4516 mir-4516 microRNA 4516 ncRNA chr15-126 chr15 48811132 48811376 + 23.6 0.000 promoter-TSS (NM_001194998) promoter-TSS (NM_001194998) -185 NM_014985 22995 Hs.443005 NM_014985 ENSG00000103995 CEP152 MCPH4|MCPH9|SCKL5 centrosomal protein 152 protein-coding chr18-174 chr18 23303190 23303434 + 23.6 0.000 intron (NM_032933, intron 14 of 14) intron (NM_032933, intron 14 of 14) 134649 NM_032933 85019 Hs.137562 NM_032933 ENSG00000134490 TMEM241 C18orf45|hVVT transmembrane protein 241 protein-coding chr7-694 chr7 5766272 5766516 + 23.6 0.000 intron (NM_207111, intron 1 of 16) MLT1A|LTR|ERVL-MaLR 15269 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr12-310 chr12 132547541 132547785 + 23.6 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) -34334 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr1-524 chr1 1019513 1019757 + 23.6 0.000 promoter-TSS (NM_001305275) promoter-TSS (NM_001305275) -485 NM_198576 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr16-671 chr16 85491918 85492162 + 23.6 0.000 Intergenic Intergenic -119369 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr1-1424 chr1 185646473 185646717 + 23.6 0.000 Intergenic Intergenic -18107 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr8-422 chr8 141127543 141127787 + 23.6 0.000 promoter-TSS (NM_001352890) promoter-TSS (NM_001352890) -924 NM_014957 22898 Hs.18166 NM_014957 ENSG00000105339 DENND3 - DENN domain containing 3 protein-coding chr2-1205 chr2 25697930 25698174 + 23.6 0.000 Intergenic L2c|LINE|L2 -24378 NM_001256304 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr16-867 chr16 84526718 84526962 + 23.6 0.000 Intergenic Intergenic -22181 NM_020947 57707 Hs.288274 NM_020947 ENSG00000140950 MEAK7 KIAA1609|TLDC1|mEAK-7 MTOR associated protein, eak-7 homolog protein-coding chr9-950 chr9 121888384 121888628 + 23.6 0.000 intron (NM_001139442, intron 6 of 8) L2b|LINE|L2 145721 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr6-1086 chr6 148272220 148272464 + 23.6 0.000 promoter-TSS (NM_001346505) promoter-TSS (NM_001346505) 14 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr19-1661 chr19 52028440 52028684 + 23.6 0.000 promoter-TSS (NM_025040) promoter-TSS (NM_025040) -183 NM_025040 80110 Hs.292336 NM_025040 ENSG00000142556 ZNF614 - zinc finger protein 614 protein-coding chr22-301 chr22 24247697 24247941 + 23.6 0.000 Intergenic Intergenic -2677 NM_001099781 2687 Hs.437156 NM_004121 ENSG00000099998 GGT5 GGL|GGT 5|GGT-REL|GGTLA1 gamma-glutamyltransferase 5 protein-coding chr1-897 chr1 222711426 222711670 + 23.6 0.000 intron (NM_022831, intron 1 of 9) intron (NM_022831, intron 1 of 9) 943 NM_022831 64853 Hs.156625 NM_022831 ENSG00000186063 AIDA C1orf80 axin interactor, dorsalization associated protein-coding chr13-192 chr13 102845926 102846170 + 23.6 0.000 5' UTR (NM_000123, exon 1 of 15) 5' UTR (NM_000123, exon 1 of 15) 207 NM_000123 2073 Hs.258429 NM_000123 ENSG00000134899 ERCC5 COFS3|ERCC5-201|ERCM2|UVDR|XPG|XPGC ERCC excision repair 5, endonuclease protein-coding chr6-726 chr6 131946866 131947110 + 23.6 0.000 Intergenic Intergenic 4384 NM_001901 1490 Hs.410037 NM_001901 ENSG00000118523 CCN2 CTGF|HCS24|IGFBP8|NOV2 cellular communication network factor 2 protein-coding chr2-1747 chr2 85066996 85067240 + 23.4 0.000 non-coding (NR_146453, exon 1 of 2) non-coding (NR_146453, exon 1 of 2) 229 NR_146453 100996478 Hs.434398 NR_146453 ENSG00000260840 LINC01964 - long intergenic non-protein coding RNA 1964 ncRNA chr5-683 chr5 136214102 136214346 + 23.4 0.000 intron (NM_020389, intron 11 of 11) intron (NM_020389, intron 11 of 11) -12431 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chr15-258 chr15 50885901 50886145 + 23.4 0.000 Intergenic Intergenic -22660 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr5-349 chr5 140357736 140357980 + 23.4 0.000 Intergenic Intergenic -2336 NM_001258427 83697 Hs.550313 NM_031467 ENSG00000113073 SLC4A9 AE4 solute carrier family 4 member 9 protein-coding chr15-320 chr15 43106071 43106315 + 23.4 0.000 promoter-TSS (NM_174916) promoter-TSS (NM_174916) -155 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chr19-889 chr19 47106560 47106804 + 23.4 0.000 intron (NM_015168, intron 2 of 14) intron (NM_015168, intron 2 of 14) 7094 NM_015168 23211 Hs.104661 NM_015168 ENSG00000130749 ZC3H4 C19orf7 zinc finger CCCH-type containing 4 protein-coding chr11-829 chr11 122984337 122984581 + 23.4 0.000 Intergenic CpG -2625 NM_001098169 390259 Hs.449687 NM_001098169 ENSG00000188909 BSX BSX1 brain specific homeobox protein-coding chr12-372 chr12 67269311 67269555 + 23.4 0.000 promoter-TSS (NM_001329675) promoter-TSS (NM_001329675) 75 NM_001329674 55832 Hs.546407 NM_018448 ENSG00000111530 CAND1 TIP120|TIP120A cullin associated and neddylation dissociated 1 protein-coding chr6-143 chr6 43053624 43053868 + 23.4 0.000 TTS (NM_001300848) TTS (NM_001300848) 199 NM_001168370 9820 Hs.520136 NM_014780 ENSG00000044090 CUL7 3M1|CUL-7|KIAA0076|dJ20C7.5 cullin 7 protein-coding chr14-36 chr14 96391708 96391952 + 23.4 0.000 promoter-TSS (NM_152327) promoter-TSS (NM_152327) -298 NM_001350888 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding chr1-1580 chr1 205284762 205285006 + 23.4 0.000 Intergenic Intergenic 27687 NM_001331034 9911 Hs.6360 NM_014858 ENSG00000133069 TMCC2 HUCEP11 transmembrane and coiled-coil domain family 2 protein-coding chr1-936 chr1 53107609 53107853 + 23.4 0.000 TTS (NM_001287596) TTS (NM_001287596) 34907 NM_001287597 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr20-273 chr20 43955385 43955629 + 23.4 0.000 intron (NM_032883, intron 2 of 9) intron (NM_032883, intron 2 of 9) 9611 NM_001098798 84969 Hs.26608 NM_032883 ENSG00000124191 TOX2 C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1 TOX high mobility group box family member 2 protein-coding chr12-496 chr12 1519243 1519487 + 23.4 0.000 Intergenic Intergenic 12827 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr4-539 chr4 107440885 107441129 + 23.4 0.000 Intergenic MER2|DNA|TcMar-Tigger 279227 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding chr6-150 chr6 157981748 157981992 + 23.4 0.000 promoter-TSS (NM_003898) promoter-TSS (NM_003898) 7 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr11-1413 chr11 8604357 8604601 + 23.4 0.000 Intergenic L2a|LINE|L2 -10251 NM_001352391 65975 Hs.501833 NM_030906 ENSG00000130413 STK33 - serine/threonine kinase 33 protein-coding chr1-1380 chr1 115090050 115090294 + 23.4 0.000 promoter-TSS (NM_001308315) promoter-TSS (NM_001308315) -669 NM_005725 10100 Hs.310458 NM_005725 ENSG00000134198 TSPAN2 NET3|TSN2|TSPAN-2 tetraspanin 2 protein-coding chr1-1351 chr1 65762105 65762349 + 23.4 0.000 Intergenic LTR37-int|LTR|ERV1 -30283 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr3-647 chr3 21447920 21448164 + 23.4 0.000 intron (NM_024697, intron 4 of 7) intron (NM_024697, intron 4 of 7) 42316 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr7-565 chr7 44973782 44974026 + 23.4 0.000 intron (NM_033054, intron 5 of 21) intron (NM_033054, intron 5 of 21) 5111 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr22-295 chr22 46175657 46175901 + 23.4 0.000 intron (NM_001001928, intron 2 of 7) L1MD1|LINE|L1 24984 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr3-1260 chr3 45477060 45477304 + 23.4 0.000 intron (NM_001368263, intron 9 of 20) intron (NM_001368263, intron 9 of 20) 32363 NR_048543 100885795 Hs.641094 NR_048543 LARS2-AS1 - LARS2 antisense RNA 1 ncRNA chr1-2315 chr1 29171068 29171312 + 23.4 0.000 intron (NM_005626, intron 1 of 5) LFSINE_Vert|SINE|tRNA 10710 NM_005626 6429 Hs.469970 NM_005626 ENSG00000116350 SRSF4 SFRS4|SRP75 serine and arginine rich splicing factor 4 protein-coding chr20-145 chr20 35284759 35285003 + 23.4 0.000 promoter-TSS (NM_001267810) promoter-TSS (NM_001267810) -109 NM_181466 3692 Hs.743992 NM_002212 ENSG00000242372 EIF6 CAB|EIF3A|ITGB4BP|b(2)gcn|eIF-6|p27(BBP)|p27BBP eukaryotic translation initiation factor 6 protein-coding chr1-671 chr1 1040655 1040899 + 23.4 0.000 exon (NM_001305275, exon 4 of 39) exon (NM_001305275, exon 4 of 39) 6784 NM_001364727 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chrX-550 chrX 133698336 133698580 + 23.4 0.000 intron (NM_001164619, intron 3 of 6) intron (NM_001164619, intron 3 of 6) -198985 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr9-385 chr9 20622412 20622656 + 23.4 0.000 promoter-TSS (NM_004529) promoter-TSS (NM_004529) -35 NM_004529 4300 Hs.317248 NM_004529 ENSG00000171843 MLLT3 AF9|YEATS3 MLLT3 super elongation complex subunit protein-coding chr10-778 chr10 3469091 3469335 + 23.4 0.000 intron (NR_155743, intron 3 of 4) intron (NR_155743, intron 3 of 4) 33625 NR_155743 101927880 NR_155743 LINC02669 - long intergenic non-protein coding RNA 2669 ncRNA chr12-1214 chr12 108840692 108840936 + 23.4 0.000 intron (NM_018984, intron 2 of 14) intron (NM_018984, intron 2 of 14) -3808 NR_030350 693204 NR_030350 ENSG00000207622 MIR619 MIRN619|hsa-mir-619 microRNA 619 ncRNA chr1-1805 chr1 100622118 100622362 + 23.4 0.000 Intergenic Intergenic 24764 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr2-842 chr2 62014118 62014362 + 23.4 0.000 intron (NM_001321781, intron 2 of 2) intron (NM_001321781, intron 2 of 2) 108598 NM_152516 150684 Hs.468702 NM_152516 ENSG00000173163 COMMD1 C2orf5|MURR1 copper metabolism domain containing 1 protein-coding chr5-896 chr5 78907349 78907593 + 23.4 0.000 intron (NM_198709, intron 5 of 7) intron (NM_198709, intron 5 of 7) 77839 NM_000046 411 Hs.149103 NM_000046 ENSG00000113273 ARSB ASB|G4S|MPS6 arylsulfatase B protein-coding chr14-616 chr14 45815982 45816226 + 23.4 0.000 Intergenic SATR1|Satellite|Satellite -100502 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr3-611 chr3 128804376 128804620 + 23.4 0.000 intron (NM_004637, intron 3 of 5) intron (NM_004637, intron 3 of 5) -42310 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr19-604 chr19 46976348 46976592 + 23.4 0.000 intron (NM_004491, intron 3 of 6) intron (NM_004491, intron 3 of 6) -43367 NM_002517 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr22-160 chr22 41021829 41022073 + 23.4 0.000 Intergenic CpG 51770 NR_132979 106635682 NR_132979 SNORD140 - small nucleolar RNA, C/D box 140 snoRNA chr4-613 chr4 118968071 118968315 + 23.4 0.000 intron (NM_001128934, intron 1 of 4) intron (NM_001128934, intron 1 of 4) 79339 NM_001128934 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding chr1-344 chr1 227318256 227318500 + 23.4 0.000 5' UTR (NM_001366010, exon 1 of 35) 5' UTR (NM_001366010, exon 1 of 35) 114 NM_001366019 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr2-1311 chr2 141516024 141516268 + 23.4 0.000 intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 615555 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding chr22-352 chr22 38316050 38316294 + 23.4 0.000 intron (NM_001289912, intron 5 of 14) intron (NM_001289912, intron 5 of 14) 1261 NM_152221 1454 Hs.474833 NM_001894 ENSG00000213923 CSNK1E CKIe|CKIepsilon|HCKIE casein kinase 1 epsilon protein-coding chr5-1081 chr5 110295770 110296014 + 23.4 0.000 Intergenic MER44D|DNA|TcMar-Tigger 218023 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr2-789 chr2 182522459 182522703 + 23.4 0.000 promoter-TSS (NM_005019) promoter-TSS (NM_005019) -55 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr3-267 chr3 27326727 27326971 + 23.4 0.000 intron (NM_152534, intron 6 of 38) intron (NM_152534, intron 6 of 38) 42534 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr2-346 chr2 152717532 152717776 + 23.4 0.000 promoter-TSS (NM_001365597) promoter-TSS (NM_001365597) -29 NM_017892 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr2-298 chr2 177263594 177263838 + 23.4 0.000 5' UTR (NM_001145413, exon 1 of 5) 5' UTR (NM_001145413, exon 1 of 5) 415 NM_001313900 4780 Hs.744006 NM_006164 ENSG00000116044 NFE2L2 HEBP1|IMDDHH|NRF2 nuclear factor, erythroid 2 like 2 protein-coding chr5-265 chr5 60339576 60339820 + 23.4 0.000 intron (NM_001364599, intron 1 of 16) intron (NM_001364599, intron 1 of 16) 32965 NM_001364600 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr11-864 chr11 13135386 13135630 + 23.4 0.000 Intergenic Intergenic 126192 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr4-407 chr4 47839335 47839579 + 23.4 0.000 intron (NR_125881, intron 1 of 2) MIR3|SINE|MIR -1351 NM_001278585 10699 Hs.518618 NM_006587 ENSG00000145244 CORIN ATC2|CRN|Lrp4|PEE5|TMPRSS10 corin, serine peptidase protein-coding chr11-520 chr11 71987965 71988209 + 23.4 0.000 intron (NM_018320, intron 5 of 8) L1ME4c|LINE|L1 -10822 NM_001039660 10068 Hs.591967 NM_005699 ENSG00000137496 IL18BP IL18BPa interleukin 18 binding protein protein-coding chr2-195 chr2 210002381 210002625 + 23.4 0.000 promoter-TSS (NM_006916) promoter-TSS (NM_006916) -62 NM_001278288 6120 Hs.282260 NM_006916 ENSG00000197713 RPE RPE2-1 ribulose-5-phosphate-3-epimerase protein-coding chr12-606 chr12 754923 755167 + 23.4 0.000 intron (NM_001184985, intron 1 of 27) intron (NM_001184985, intron 1 of 27) 2122 NM_213655 65125 Hs.744906 NM_014823 ENSG00000060237 WNK1 HSAN2|HSN2|KDP|PPP1R167|PRKWNK1|PSK|p65 WNK lysine deficient protein kinase 1 protein-coding chr3-368 chr3 31077211 31077455 + 23.4 0.000 Intergenic L2|LINE|L2 84454 NR_130459 100423038 NR_130459 ENSG00000265376 MIR466 hsa-mir-466 microRNA 466 ncRNA chr13-318 chr13 30985817 30986061 + 23.4 0.000 Intergenic L1MC|LINE|L1 53283 NM_152325 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr11-1234 chr11 127994803 127995047 + 23.4 0.000 Intergenic Intergenic -213841 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr2-1610 chr2 10475445 10475689 + 23.4 0.000 Intergenic Intergenic 25839 NR_110597 101929715 Hs.634550 NR_110597 ODC1-DT lncRNA-MIF ODC1 divergent transcript ncRNA chr5-571 chr5 34686817 34687061 + 23.4 0.000 promoter-TSS (NM_001145523) promoter-TSS (NM_001145523) -620 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr4-601 chr4 73259336 73259580 + 23.4 0.000 promoter-TSS (NM_015574) promoter-TSS (NM_015574) -660 NM_198889 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding chrX-314 chrX 81424223 81424467 + 23.4 0.000 Intergenic Intergenic 222243 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr19-836 chr19 52008204 52008448 + 23.4 0.000 promoter-TSS (NM_001321317) promoter-TSS (NM_001321317) -96 NM_198480 284370 Hs.368355 NM_198480 ENSG00000197619 ZNF615 - zinc finger protein 615 protein-coding chr1-1855 chr1 161885187 161885431 + 23.4 0.000 intron (NM_007348, intron 14 of 15) intron (NM_007348, intron 14 of 15) 118989 NM_007348 22926 Hs.492740 NM_007348 ENSG00000118217 ATF6 ACHM7|ATF6A activating transcription factor 6 protein-coding chr13-386 chr13 51831569 51831813 + 23.4 0.000 intron (NM_001351003, intron 2 of 4) intron (NM_001351003, intron 2 of 4) 13486 NM_001351005 283521 Hs.649896 NM_178515 ENSG00000281106 TMEM272 LINC00282|NCRNA00282 transmembrane protein 272 protein-coding chr21-118 chr21 42724327 42724571 + 23.4 0.000 intron (NM_001001578, intron 3 of 16) intron (NM_001001578, intron 3 of 16) 55545 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr6-564 chr6 151209249 151209493 + 23.4 0.000 intron (NR_125868, intron 1 of 2) intron (NR_125868, intron 1 of 2) 19086 NR_125868 102723831 Hs.684425 NR_125868 LOC102723831 - uncharacterized LOC102723831 ncRNA chr1-646 chr1 55402181 55402425 + 23.4 0.000 Intergenic L2c|LINE|L2 176662 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr1-1669 chr1 19219693 19219937 + 23.4 0.000 intron (NM_001271428, intron 21 of 22) intron (NM_001271428, intron 21 of 22) 9429 NR_135114 101927895 Hs.660534 NR_135114 ENSG00000230424 EMC1-AS1 - EMC1 antisense RNA 1 ncRNA chr1-1598 chr1 232950160 232950404 + 23.4 0.000 promoter-TSS (NR_138027) promoter-TSS (NR_138027) -329 NR_138028 84284 Hs.642715 NM_032324 ENSG00000135778 NTPCR C1orf57|HCR-NTPase|THEP1 nucleoside-triphosphatase, cancer-related protein-coding chr5-572 chr5 36150844 36151088 + 23.4 0.000 intron (NM_001007527, intron 1 of 17) intron (NM_001007527, intron 1 of 17) 921 NM_001007527 92255 Hs.294103 NM_001007527 ENSG00000164187 LMBRD2 - LMBR1 domain containing 2 protein-coding chr13-236 chr13 37656713 37656957 + 23.4 0.000 intron (NM_003306, intron 6 of 10) intron (NM_003306, intron 6 of 10) -57991 NM_001286666 10631 Hs.136348 NM_006475 ENSG00000133110 POSTN OSF-2|OSF2|PDLPOSTN|PN periostin protein-coding chr17-228 chr17 29140220 29140464 + 23.4 0.000 promoter-TSS (NM_001346768) promoter-TSS (NM_001346768) 47 NM_001346768 399687 Hs.462590 NM_078471 ENSG00000196535 MYO18A MAJN|MYSPDZ|SP-R210|SPR210 myosin XVIIIA protein-coding chr9-901 chr9 81842670 81842914 + 23.4 0.000 Intergenic Intergenic -70645 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr6-728 chr6 132445271 132445515 + 23.4 0.000 TTS (NM_001326578) TTS (NM_001326578) -43918 NM_015529 26002 Hs.6909 NM_015529 ENSG00000079931 MOXD1 MOX|PRO5780|dJ248E1.1 monooxygenase DBH like 1 protein-coding chr16-445 chr16 84618791 84619035 + 23.4 0.000 promoter-TSS (NM_021149) promoter-TSS (NM_021149) -835 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr12-567 chr12 24821853 24822097 + 23.4 0.000 intron (NM_001178091, intron 9 of 9) intron (NM_001178091, intron 9 of 9) 80247 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding chr2-468 chr2 190648661 190648905 + 23.4 0.000 promoter-TSS (NM_005966) promoter-TSS (NM_005966) -112 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr12-365 chr12 45216649 45216893 + 23.4 0.000 promoter-TSS (NR_037144) promoter-TSS (NR_037144) 676 NM_001142679 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr7-370 chr7 5781525 5781769 + 23.4 0.000 promoter-TSS (NM_207116) promoter-TSS (NM_207116) 16 NM_207111 54476 Hs.487458 NM_019011 ENSG00000011275 RNF216 CAHH|TRIAD3|U7I1|UBCE7IP1|ZIN ring finger protein 216 protein-coding chr9-712 chr9 129167150 129167394 + 23.4 0.000 Intergenic Intergenic 10989 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr1-2042 chr1 60386312 60386556 + 23.3 0.000 Intergenic Intergenic 236251 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr17-405 chr17 42019856 42020100 + 23.3 0.000 promoter-TSS (NM_001144928) promoter-TSS (NM_001144928) -112 NM_001144927 28511 Hs.632252 NM_017595 ENSG00000168256 NKIRAS2 KBRAS2|kappaB-Ras2 NFKB inhibitor interacting Ras like 2 protein-coding chr5-780 chr5 125719762 125720006 + 23.3 0.000 Intergenic Intergenic 226623 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA chr11-576 chr11 72482311 72482555 + 23.3 0.000 Intergenic Intergenic -47749 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr2-289 chr2 87076501 87076745 + 23.3 0.000 promoter-TSS (NR_026846) promoter-TSS (NR_026846) -210 NR_026846 285074 Hs.424184 NM_001012626 ENSG00000285793 LOC285074 - anaphase promoting complex subunit 1 pseudogene pseudo chr8-603 chr8 22590282 22590526 + 23.3 0.000 intron (NM_198042, intron 7 of 7) L2b|LINE|L2 -9195 NM_001013842 541565 Hs.743508 NM_173686 ENSG00000241852 C8orf58 - chromosome 8 open reading frame 58 protein-coding chr4-719 chr4 90911698 90911942 + 23.3 0.000 intron (NM_001145065, intron 8 of 10) L1PA4|LINE|L1 676789 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding chr17-466 chr17 1495516 1495760 + 23.3 0.000 3' UTR (NM_016532, exon 12 of 12) 3' UTR (NM_016532, exon 12 of 12) -2952 NM_001080779 4641 Hs.286226 NM_033375 ENSG00000197879 MYO1C MMI-beta|MMIb|NMI|myr2 myosin IC protein-coding chr1-2556 chr1 170309719 170309963 + 23.3 0.000 Intergenic Intergenic -25633 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr8-376 chr8 22066428 22066672 + 23.3 0.000 promoter-TSS (NM_001323381) promoter-TSS (NM_001323381) 34 NM_001323381 2039 Hs.106124 NM_001978 ENSG00000158856 DMTN DMT|EPB49 dematin actin binding protein protein-coding chr7-1015 chr7 116210927 116211171 + 23.3 0.000 intron (NM_015641, intron 1 of 6) intron (NM_015641, intron 1 of 6) 510 NM_015641 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr15-524 chr15 85619066 85619310 + 23.3 0.000 promoter-TSS (NM_001270546) promoter-TSS (NM_001270546) -762 NM_001270546 11214 Hs.459211 NM_006738 ENSG00000170776 AKAP13 AKAP-13|AKAP-Lbc|ARHGEF13|BRX|HA-3|Ht31|LBC|PRKA13|PROTO-LB|PROTO-LBC|c-lbc|p47 A-kinase anchoring protein 13 protein-coding chr1-282 chr1 228275989 228276233 + 23.3 0.000 intron (NM_052843, intron 21 of 80) CpG-2337 -62447 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr5-423 chr5 132293471 132293715 + 23.3 0.000 promoter-TSS (NM_003059) promoter-TSS (NM_003059) -801 NM_003059 6583 Hs.310591 NM_003059 ENSG00000197208 SLC22A4 DFNB60|OCTN1 solute carrier family 22 member 4 protein-coding chr2-226 chr2 127642549 127642793 + 23.3 0.000 intron (NM_001136037, intron 6 of 10) intron (NM_001136037, intron 6 of 10) -3193 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding chr7-460 chr7 44825142 44825386 + 23.3 0.000 Intergenic Intergenic 22862 NM_012412 94239 Hs.488189 NM_012412 ENSG00000105968 H2AFV H2A.Z-2|H2AV H2A histone family member V protein-coding chr10-925 chr10 118108413 118108657 + 23.3 0.000 intron (NR_026940, intron 3 of 3) intron (NR_026940, intron 3 of 3) -61594 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr2-1424 chr2 241209939 241210183 + 23.3 0.000 intron (NM_001370694, intron 13 of 24) intron (NM_001370694, intron 13 of 24) 21384 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr11-1266 chr11 18788854 18789098 + 23.3 0.000 intron (NM_006906, intron 1 of 14) intron (NM_006906, intron 1 of 14) 2822 NM_001278239 84867 Hs.79092 NM_006906 ENSG00000110786 PTPN5 PTPSTEP|STEP|STEP61 protein tyrosine phosphatase non-receptor type 5 protein-coding chr6-200 chr6 158644678 158644922 + 23.3 0.000 promoter-TSS (NM_006519) promoter-TSS (NM_006519) -57 NM_006519 6993 Hs.445999 NM_006519 ENSG00000146425 DYNLT1 CW-1|TCTEL1|tctex-1 dynein light chain Tctex-type 1 protein-coding chr4-1006 chr4 77921877 77922121 + 23.3 0.000 intron (NM_020236, intron 7 of 8) L2a|LINE|L2 59169 NM_020236 65008 Hs.532019 NM_020236 ENSG00000169288 MRPL1 BM022|L1MT|MRP-L1 mitochondrial ribosomal protein L1 protein-coding chr11-1008 chr11 67437514 67437758 + 23.3 0.000 promoter-TSS (NM_005608) promoter-TSS (NM_005608) 46 NM_005608 5790 Hs.155975 NM_005608 ENSG00000213402 PTPRCAP CD45-AP|LPAP protein tyrosine phosphatase receptor type C associated protein protein-coding chr7-703 chr7 20385320 20385564 + 23.3 0.000 intron (NM_002214, intron 6 of 13) intron (NM_002214, intron 6 of 13) -53680 NR_110119 101927811 Hs.285724 NR_110119 ENSG00000271133 LOC101927811 - uncharacterized LOC101927811 ncRNA chr9-860 chr9 20558704 20558948 + 23.3 0.000 intron (NM_001286691, intron 2 of 10) intron (NM_001286691, intron 2 of 10) -56484 NR_039685 100616441 NR_039685 ENSG00000264941 MIR4474 - microRNA 4474 ncRNA chr21-178 chr21 42578171 42578415 + 23.3 0.000 intron (NM_001320537, intron 18 of 19) intron (NM_001320537, intron 18 of 19) 36802 NR_131192 101928233 Hs.534827 NR_131192 ENSG00000225431 LINC01671 - long intergenic non-protein coding RNA 1671 ncRNA chr3-982 chr3 73490929 73491173 + 23.3 0.000 intron (NM_015009, intron 3 of 9) intron (NM_015009, intron 3 of 9) -16419 NM_001303141 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr10-215 chr10 44975088 44975332 + 23.3 0.000 TTS (NM_007021) TTS (NM_007021) 3599 NM_007021 11067 Hs.93675 NM_007021 ENSG00000165507 DEPP1 C10orf10|DEPP|FIG|Fseg DEPP1 autophagy regulator protein-coding chr1-961 chr1 190294223 190294467 + 23.3 0.000 intron (NM_199051, intron 2 of 7) AluJb|SINE|Alu 181665 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding chr7-1124 chr7 78970588 78970832 + 23.3 0.000 intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -38278 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA chr11-362 chr11 66335495 66335739 + 23.3 0.000 exon (NM_001363560, exon 4 of 10) exon (NM_001363560, exon 4 of 10) 817 NM_001363560 9610 Hs.1030 NM_004292 ENSG00000174791 RIN1 - Ras and Rab interactor 1 protein-coding chr10-423 chr10 79185397 79185641 + 23.3 0.000 intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 116553 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr19-602 chr19 45886709 45886953 + 23.3 0.000 promoter-TSS (NM_015649) promoter-TSS (NM_015649) -690 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr1-2166 chr1 1335847 1336091 + 23.3 0.000 TTS (NM_152228) TTS (NM_152228) 3739 NR_106866 102466740 NR_106866 ENSG00000284372 MIR6808 hsa-mir-6808 microRNA 6808 ncRNA chr18-199 chr18 23862204 23862448 + 23.3 0.000 intron (NM_001127717, intron 35 of 73) intron (NM_001127717, intron 35 of 73) -10694 NM_000227 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chrX-87 chrX 12975027 12975271 + 23.3 0.000 promoter-TSS (NM_021109) promoter-TSS (NM_021109) 39 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding chr1-177 chr1 38991051 38991295 + 23.3 0.000 promoter-TSS (NM_001136275) promoter-TSS (NM_001136275) -71 NM_001136275 79647 Hs.293563 NM_024595 ENSG00000174574 AKIRIN1 C1orf108|STRF2 akirin 1 protein-coding chr19-858 chr19 8268838 8269082 + 23.3 0.000 Intergenic LTR13|LTR|ERVK 39398 NM_016579 51293 Hs.558499 NM_016579 ENSG00000167775 CD320 8D6|8D6A|TCBLR|TCN2R CD320 molecule protein-coding chr6-702 chr6 89145854 89146098 + 23.3 0.000 promoter-TSS (NM_001010853) promoter-TSS (NM_001010853) -79 NM_001010853 135293 Hs.356247 NM_001010853 ENSG00000146281 PM20D2 ACY1L2 peptidase M20 domain containing 2 protein-coding chr1-1665 chr1 17551955 17552199 + 23.3 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) 12379 NM_018125 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr12-804 chr12 9958046 9958290 + 23.3 0.000 intron (NM_001207010, intron 1 of 6) LOR1-int|LTR|ERV1 -4831 NR_135047 400002 NR_135047 ENSG00000231560 CLEC12A-AS1 - CLEC12A antisense RNA 1 ncRNA chr12-1154 chr12 65948567 65948811 + 23.3 0.000 intron (NM_001300918, intron 3 of 4) intron (NM_001300918, intron 3 of 4) -66364 NR_158985 100129940 Hs.685856 NR_120478 ENSG00000197301 HMGA2-AS1 - HMGA2 antisense RNA 1 ncRNA chr3-762 chr3 122514576 122514820 + 23.3 0.000 intron (NR_026698, intron 1 of 14) CpG 241 NR_026698 3836 Hs.161008 NM_002264 ENSG00000114030 KPNA1 IPOA5|NPI-1|RCH2|SRP1 karyopherin subunit alpha 1 protein-coding chr17-704 chr17 63675276 63675520 + 23.3 0.000 intron (NM_203351, intron 7 of 16) intron (NM_203351, intron 7 of 16) 24727 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr11-758 chr11 86440384 86440628 + 23.3 0.000 TTS (NR_147831) TTS (NR_147831) 65619 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding chr16-861 chr16 81526797 81527041 + 23.3 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) -6983 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr2-343 chr2 117856547 117856791 + 23.3 0.000 Intergenic LTR40c|LTR|ERVL 22938 NR_158150 107985939 NR_158150 LOC107985939 - uncharacterized LOC107985939 ncRNA chr2-1782 chr2 105345028 105345272 + 23.3 0.000 intron (NM_001286537, intron 4 of 4) intron (NM_001286537, intron 4 of 4) 7610 NM_024093 79074 Hs.549577 NM_024093 ENSG00000135974 C2orf49 asw chromosome 2 open reading frame 49 protein-coding chr1-573 chr1 981713 981957 + 23.3 0.000 promoter-TSS (NM_001369898) promoter-TSS (NM_001369898) 258 NM_001291366 84808 Hs.271462 NM_032722 ENSG00000187642 PERM1 C1orf170 PPARGC1 and ESRR induced regulator, muscle 1 protein-coding chr1-2079 chr1 156806327 156806571 + 23.3 0.000 TTS (NM_001161444) TTS (NM_001161444) -9301 NM_001007792 4914 Hs.406293 NM_002529 ENSG00000198400 NTRK1 MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA neurotrophic receptor tyrosine kinase 1 protein-coding chr1-1544 chr1 150192135 150192379 + 23.3 0.000 Intergenic Intergenic 31529 NR_135098 105371433 Hs.599366 NR_135098 LOC105371433 - uncharacterized LOC105371433 ncRNA chr3-287 chr3 128584498 128584742 + 23.3 0.000 Intergenic Intergenic -8534 NR_125802 23434 Hs.194283 NM_007354 ENSG00000198685 LINC01565 C3orf27|GR6 long intergenic non-protein coding RNA 1565 ncRNA chr2-1309 chr2 138707479 138707723 + 23.3 0.000 intron (NM_007226, intron 1 of 1) L3|LINE|CR1 72789 NM_007226 11249 Hs.435019 NM_007226 ENSG00000144227 NXPH2 NPH2 neurexophilin 2 protein-coding chr7-471 chr7 76109020 76109264 + 23.3 0.000 promoter-TSS (NR_135079) promoter-TSS (NR_135079) -380 NR_135079 101927126 Hs.632320 NR_135079 GTF2IP7 - general transcription factor IIi pseudogene 7 pseudo chr6-806 chr6 44071831 44072075 + 23.3 0.000 intron (NR_125864, intron 1 of 4) Tigger15a|DNA|TcMar-Tigger 2699 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr15-270 chr15 25438076 25438320 + 23.3 0.000 promoter-TSS (NM_001354505) promoter-TSS (NM_001354505) 31 NM_001354505 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding chr9-1221 chr9 75448265 75448509 + 23.3 0.000 Intergenic Intergenic 359873 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr1-2459 chr1 99546599 99546843 + 23.3 0.000 intron (NR_031666, intron 3 of 4) intron (NR_031666, intron 3 of 4) -58917 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA chr2-1451 chr2 28813753 28813997 + 23.3 0.000 intron (NM_001142634, intron 1 of 6) intron (NM_001142634, intron 1 of 6) -2122 NM_001008779 245711 Hs.511956 NM_182756 ENSG00000163806 SPDYA RINGO3|RINGOA|SPDY1|SPY1 speedy/RINGO cell cycle regulator family member A protein-coding chr22-279 chr22 22934549 22934793 + 23.3 0.000 Intergenic Intergenic 46855 NM_001178126 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr7-325 chr7 96321436 96321680 + 23.3 0.000 intron (NM_001160210, intron 1 of 17) CpG 540 NR_027662 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr9-691 chr9 124310273 124310517 + 23.3 0.000 intron (NM_001166169, intron 2 of 9) intron (NM_001166169, intron 2 of 9) 17975 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr5-323 chr5 138725333 138725577 + 23.3 0.000 Intergenic Intergenic 27854 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr6-454 chr6 38973260 38973504 + 23.3 0.000 intron (NM_001371, intron 82 of 91) intron (NM_001371, intron 82 of 91) -20275 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr1-411 chr1 28736719 28736963 + 23.3 0.000 promoter-TSS (NM_016258) promoter-TSS (NM_016258) -99 NM_016258 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr7-646 chr7 100119743 100119987 + 23.3 0.000 promoter-TSS (NM_001365001) promoter-TSS (NM_001365001) -7 NM_001190415 6878 Hs.489309 NM_005641 ENSG00000106290 TAF6 ALYUS|MGC:8964|TAF(II)70|TAF(II)80|TAF2E|TAFII-70|TAFII-80|TAFII70|TAFII80|TAFII85 TATA-box binding protein associated factor 6 protein-coding chr8-902 chr8 83902845 83903089 + 23.3 0.000 Intergenic L1PA5|LINE|L1 -279820 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr13-68 chr13 113928265 113928509 + 23.3 0.000 non-coding (NR_047495, exon 1 of 1) non-coding (NR_047495, exon 1 of 1) 604 NR_047495 100861555 Hs.353773 NR_047495 ENSG00000260910 LINC00565 - long intergenic non-protein coding RNA 565 ncRNA chr10-623 chr10 29141115 29141359 + 23.3 0.000 Intergenic Intergenic -147833 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chrX-450 chrX 46165585 46165829 + 23.3 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL 161967 NR_110388 101927574 Hs.350952 NR_110388 ENSG00000236751 LINC01186 ZNF674-1 long intergenic non-protein coding RNA 1186 ncRNA chr7-390 chr7 81484360 81484604 + 23.3 0.000 Intergenic L1M3b|LINE|L1 77337 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA chr12-1178 chr12 92927617 92927861 + 23.3 0.000 intron (NM_003566, intron 1 of 28) intron (NM_003566, intron 1 of 28) 1556 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr9-464 chr9 137614561 137614805 + 23.3 0.000 TTS (NR_122036) TTS (NR_122036) 3846 NR_122036 85026 Hs.522520 NM_032937 ENSG00000203993 ARRDC1-AS1 C9orf37 ARRDC1 antisense RNA 1 ncRNA chr22-235 chr22 20393786 20394030 + 23.3 0.000 promoter-TSS (NM_003426) promoter-TSS (NM_003426) -207 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr1-2485 chr1 115497181 115497425 + 23.3 0.000 Intergenic Intergenic -144667 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr1-838 chr1 46520467 46520711 + 23.3 0.000 Intergenic Intergenic 13590 NM_147192 127343 Hs.375623 NM_147192 ENSG00000197587 DMBX1 MBX|OTX3|PAXB diencephalon/mesencephalon homeobox 1 protein-coding chr8-844 chr8 33218876 33219120 + 23.3 0.000 Intergenic L2|LINE|L2 254148 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding chr3-1112 chr3 39439281 39439525 + 23.3 0.000 Intergenic Intergenic -28277 NM_001278322 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding chr1-1167 chr1 58932690 58932934 + 23.3 0.000 Intergenic HAL1|LINE|L1 -87664 NR_110626 101926925 NR_110626 LINC01358 - long intergenic non-protein coding RNA 1358 ncRNA chr6-749 chr6 154403866 154404110 + 23.3 0.000 3' UTR (NM_173515, exon 13 of 13) 3' UTR (NM_173515, exon 13 of 13) 30085 NM_001368119 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr3-569 chr3 35629554 35629798 + 23.3 0.000 Intergenic AluJr|SINE|Alu -9849 NM_001267616 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr7-769 chr7 100602186 100602430 + 23.3 0.000 promoter-TSS (NM_002593) promoter-TSS (NM_002593) -55 NM_002593 5118 Hs.202097 NM_002593 ENSG00000106333 PCOLCE PCPE|PCPE-1|PCPE1 procollagen C-endopeptidase enhancer protein-coding chr12-326 chr12 49188850 49189094 + 23.3 0.000 5' UTR (NM_001270400, exon 1 of 4) 5' UTR (NM_001270400, exon 1 of 4) 108 NM_006009 7846 Hs.654422 NM_006009 ENSG00000167552 TUBA1A B-ALPHA-1|LIS3|TUBA3 tubulin alpha 1a protein-coding chr17-1396 chr17 74425015 74425259 + 23.3 0.000 Intergenic Intergenic -6951 NM_022036 55890 Hs.446438 NM_018653 ENSG00000170412 GPRC5C RAIG-3|RAIG3 G protein-coupled receptor class C group 5 member C protein-coding chr5-502 chr5 156100156 156100400 + 23.3 0.000 Intergenic Intergenic -226479 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr16-626 chr16 4850346 4850590 + 23.3 0.000 intron (NM_001288656, intron 1 of 16) intron (NM_001288656, intron 1 of 16) 2088 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding chr11-1154 chr11 67538803 67539047 + 23.3 0.000 Intergenic Intergenic -15479 NM_016366 51475 Hs.278984 NM_016366 ENSG00000167791 CABP2 DFNB93 calcium binding protein 2 protein-coding chr19-669 chr19 5113635 5113879 + 23.1 0.000 TTS (NM_001370093) TTS (NM_001370093) 144644 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr11-688 chr11 394571 394815 + 23.1 0.000 intron (NM_001303029, intron 2 of 13) intron (NM_001303029, intron 2 of 13) 484 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr7-1062 chr7 965082 965326 + 23.1 0.000 3' UTR (NM_001031617, exon 3 of 3) 3' UTR (NM_001031617, exon 3 of 3) -9797 NM_001284308 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr11-642 chr11 126282762 126283006 + 23.1 0.000 promoter-TSS (NM_148910) promoter-TSS (NM_148910) -203 NM_001318776 114609 Hs.537126 NM_052887 ENSG00000150455 TIRAP BACTS1|Mal|MyD88-2|wyatt TIR domain containing adaptor protein protein-coding chr3-1305 chr3 53166928 53167172 + 23.1 0.000 intron (NM_006254, intron 2 of 18) intron (NM_006254, intron 2 of 18) -1653 NM_001354678 5580 Hs.155342 NM_006254 ENSG00000163932 PRKCD ALPS3|CVID9|MAY1|PKCD|nPKC-delta protein kinase C delta protein-coding chr10-624 chr10 30392643 30392887 + 23.1 0.000 Intergenic Intergenic -20858 NR_120609 729668 Hs.652158 NR_003524 GOLGA2P6 - GOLGA2 pseudogene 6 pseudo chr1-168 chr1 94927034 94927278 + 23.1 0.000 promoter-TSS (NM_001286055) promoter-TSS (NM_001286055) -46 NM_001839 1266 Hs.483454 NM_001839 ENSG00000117519 CNN3 - calponin 3 protein-coding chr6-461 chr6 49326303 49326547 + 23.1 0.000 Intergenic Intergenic 136828 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding chr2-549 chr2 37925322 37925566 + 23.1 0.000 promoter-TSS (NM_001322211) promoter-TSS (NM_001322211) -87 NM_001322211 151393 Hs.591566 NM_144713 ENSG00000115841 RMDN2 BLOCK18|FAM82A|FAM82A1|PRO34163|PYST9371|RMD-2|RMD2|RMD4 regulator of microtubule dynamics 2 protein-coding chr12-409 chr12 49869438 49869682 + 23.1 0.000 3' UTR (NM_012306, exon 12 of 12) 3' UTR (NM_012306, exon 12 of 12) -26454 NM_181708 144233 Hs.142736 NM_181708 ENSG00000186666 BCDIN3D - BCDIN3 domain containing RNA methyltransferase protein-coding chr4-737 chr4 114272335 114272579 + 23.1 0.000 Intergenic Intergenic -292810 NM_001354210 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr19-1157 chr19 2599095 2599339 + 23.1 0.000 intron (NM_052847, intron 2 of 4) intron (NM_052847, intron 2 of 4) -31498 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr17-670 chr17 2181732 2181976 + 23.1 0.000 intron (NM_001256827, intron 5 of 11) intron (NM_001256827, intron 5 of 11) -50824 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr11-613 chr11 64869186 64869430 + 23.1 0.000 intron (NM_006795, intron 2 of 4) intron (NM_006795, intron 2 of 4) 9301 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr4-140 chr4 986704 986948 + 23.1 0.000 promoter-TSS (NR_110313) promoter-TSS (NR_110313) -171 NR_110313 3425 Hs.89560 NM_000203 ENSG00000127415 IDUA IDA|MPS1 iduronidase alpha-L- protein-coding chr1-1892 chr1 201532070 201532314 + 23.1 0.000 TTS (NR_160748) TTS (NR_160748) 12288 NR_026667 376693 Hs.605989 NR_026667 RPS10P7 RPS10_2_147 ribosomal protein S10 pseudogene 7 pseudo KI270736.1-2 KI270736.1 157484 157728 + 23.1 0.000 NA NA NA NA chr2-1281 chr2 95699187 95699431 + 23.1 0.000 Intergenic Intergenic 107308 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr8-381 chr8 26010259 26010503 + 23.1 0.000 intron (NM_022659, intron 6 of 15) intron (NM_022659, intron 6 of 15) 35032 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr1-729 chr1 173476975 173477219 + 23.1 0.000 promoter-TSS (NR_037845) promoter-TSS (NR_037845) 58 NR_037845 100506023 Hs.731284 NR_037845 LOC100506023 - uncharacterized LOC100506023 ncRNA chr11-1360 chr11 119404991 119405235 + 23.1 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) 17449 NM_001311160 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr5-224 chr5 180809942 180810186 + 23.1 0.000 promoter-TSS (NR_157151) promoter-TSS (NR_157151) 73 NM_001114617 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr7-1120 chr7 75993691 75993935 + 23.1 0.000 intron (NR_156695, intron 1 of 10) intron (NR_156695, intron 1 of 10) 782 NM_001363462 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr16-1168 chr16 70331568 70331812 + 23.1 0.000 intron (NM_007242, intron 9 of 11) intron (NM_007242, intron 9 of 11) 15057 NR_039997 100506083 Hs.635008 NR_039997 ENSG00000261777 LOC100506083 - uncharacterized LOC100506083 ncRNA chr6-129 chr6 110874515 110874759 + 23.1 0.000 promoter-TSS (NM_001634) promoter-TSS (NM_001634) -147 NR_109768 262 Hs.159118 NM_001634 ENSG00000123505 AMD1 ADOMETDC|AMD|SAMDC adenosylmethionine decarboxylase 1 protein-coding chr6-58 chr6 111873414 111873658 + 23.1 0.000 promoter-TSS (NM_002037) promoter-TSS (NM_002037) -84 NM_002037 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr6-377 chr6 14035507 14035751 + 23.1 0.000 Intergenic MLT1J2|LTR|ERVL-MaLR -81627 NM_001251901 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding chr3-320 chr3 170356576 170356820 + 23.1 0.000 Intergenic Intergenic -1017 NM_001145098 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding chr19-462 chr19 39125607 39125851 + 23.1 0.000 promoter-TSS (NM_001014831) promoter-TSS (NM_001014831) -57 NM_005884 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr1-1516 chr1 59203933 59204177 + 23.1 0.000 Intergenic Intergenic -57248 NR_027120 729467 Hs.662291 NR_027120 ENSG00000224609 HSD52 - uncharacterized LOC729467 ncRNA chr22-597 chr22 46714658 46714902 + 23.1 0.000 intron (NM_022766, intron 3 of 12) L1ME3A|LINE|L1 23472 NM_022766 64781 Hs.200668 NM_022766 ENSG00000100422 CERK LK4|dA59H18.2|dA59H18.3|hCERK ceramide kinase protein-coding chr17-1180 chr17 78958548 78958792 + 23.1 0.000 Intergenic Intergenic 21253 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr6-1077 chr6 138293705 138293949 + 23.1 0.000 intron (NM_020340, intron 19 of 33) intron (NM_020340, intron 19 of 33) -75337 NM_021635 59351 Hs.302016 NM_021635 ENSG00000254440 PBOV1 UC28|UROC28|dJ171N11.2 prostate and breast cancer overexpressed 1 protein-coding chr9-1159 chr9 693563 693807 + 23.1 0.000 5' UTR (NM_001354340, exon 1 of 11) 5' UTR (NM_001354340, exon 1 of 11) 346 NM_001354337 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr4-1063 chr4 128974267 128974511 + 23.1 0.000 intron (NM_144643, intron 9 of 20) LTR108a_Mam|LTR|ERVL 119150 NM_001300898 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding chr1-697 chr1 31644941 31645185 + 23.1 0.000 promoter-TSS (NM_001359651) promoter-TSS (NM_001359651) -187 NR_033686 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding chr5-530 chr5 40552215 40552459 + 23.1 0.000 Intergenic Intergenic -127578 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding chr16-752 chr16 87789823 87790067 + 23.1 0.000 Intergenic Intergenic -10797 NR_120309 102724467 Hs.587857 NR_120309 LOC102724467 - uncharacterized LOC102724467 ncRNA chr19-1107 chr19 45507231 45507475 + 23.1 0.000 promoter-TSS (NM_003370) promoter-TSS (NM_003370) -126 NM_003370 7408 Hs.515469 NM_003370 ENSG00000125753 VASP - vasodilator stimulated phosphoprotein protein-coding chr1-1104 chr1 212950832 212951076 + 23.1 0.000 intron (NM_001136475, intron 1 of 6) CpG 413 NM_001136475 79805 Hs.96885 NM_024749 ENSG00000143494 VASH2 - vasohibin 2 protein-coding chr4-511 chr4 22515038 22515282 + 23.1 0.000 promoter-TSS (NR_162129) promoter-TSS (NR_162129) -152 NR_162129 113219450 NR_162129 MIR12115 - microRNA 12115 ncRNA chr11-1204 chr11 112230106 112230350 + 23.1 0.000 exon (NM_000317, exon 3 of 6) exon (NM_000317, exon 3 of 6) 3800 NM_000317 5805 Hs.503860 NM_000317 ENSG00000150787 PTS PTPS 6-pyruvoyltetrahydropterin synthase protein-coding chr5-786 chr5 134005333 134005577 + 23.1 0.000 promoter-TSS (NR_036624) promoter-TSS (NR_036624) -480 NM_003374 7416 Hs.519320 NM_003374 ENSG00000213585 VDAC1 PORIN|VDAC-1 voltage dependent anion channel 1 protein-coding chr10-520 chr10 80165178 80165422 + 23.1 0.000 intron (NM_145869, intron 9 of 16) intron (NM_145869, intron 9 of 16) 32570 NM_001331125 219348 Hs.204947 NM_001012973 ENSG00000189129 PLAC9 - placenta associated 9 protein-coding chr16-134 chr16 28925251 28925495 + 23.1 0.000 promoter-TSS (NM_024816) promoter-TSS (NM_024816) -135 NM_024816 79874 Hs.555978 NM_024816 ENSG00000177548 RABEP2 FRA rabaptin, RAB GTPase binding effector protein 2 protein-coding chrX-208 chrX 71301550 71301794 + 23.1 0.000 promoter-TSS (NM_001303277) promoter-TSS (NM_001303277) -78 NM_001303277 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr9-715 chr9 129596793 129597037 + 23.1 0.000 Intergenic Intergenic -11969 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr18-279 chr18 46916818 46917062 + 23.1 0.000 promoter-TSS (NM_001353901) promoter-TSS (NM_001353901) 567 NM_001354038 9063 Hs.57769 NM_004671 ENSG00000078043 PIAS2 ARIP3|DIP|MIZ1|PIASX|SIZ2|ZMIZ4 protein inhibitor of activated STAT 2 protein-coding chr4-216 chr4 105146492 105146736 + 23.1 0.000 promoter-TSS (NM_001127208) promoter-TSS (NM_001127208) -71 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr17-487 chr17 40521523 40521767 + 23.1 0.000 Intergenic Intergenic -20022 NM_032865 84951 Hs.438292 NM_032865 ENSG00000131746 TNS4 CTEN|PP14434 tensin 4 protein-coding chr15-224 chr15 51981573 51981817 + 23.1 0.000 Intergenic Intergenic -9894 NM_001286430 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr6-657 chr6 15621630 15621874 + 23.1 0.000 intron (NR_036448, intron 6 of 9) intron (NR_036448, intron 6 of 9) 41276 NR_036448 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding chr7-386 chr7 74661006 74661250 + 23.1 0.000 intron (NM_001163636, intron 1 of 33) intron (NM_001163636, intron 1 of 33) 3410 NM_001518 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chrX-449 chrX 45772682 45772926 + 23.1 0.000 Intergenic MIR|SINE|MIR -25680 NR_029636 407007 NR_029636 ENSG00000207725 MIR222 MIRN222|miRNA222|mir-222 microRNA 222 ncRNA chr1-1579 chr1 203558484 203558728 + 23.1 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 64453 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr1-416 chr1 44799770 44800014 + 23.1 0.000 promoter-TSS (NM_004073) promoter-TSS (NM_004073) -485 NM_004073 1263 Hs.632415 NM_004073 ENSG00000173846 PLK3 CNK|FNK|PLK-3|PRK polo like kinase 3 protein-coding chr12-493 chr12 122318593 122318837 + 23.1 0.000 intron (NM_198240, intron 16 of 23) intron (NM_198240, intron 16 of 23) -52221 NM_001351021 65082 Hs.487883 NM_022916 ENSG00000139719 VPS33A MPSPS VPS33A core subunit of CORVET and HOPS complexes protein-coding chr12-428 chr12 79452126 79452370 + 23.1 0.000 TTS (NM_001135805) TTS (NM_001135805) 32991 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chr5-300 chr5 160399703 160399947 + 23.1 0.000 5' UTR (NM_022090, exon 1 of 2) 5' UTR (NM_022090, exon 1 of 2) 229 NM_022090 63920 Hs.529464 NM_022090 ENSG00000221886 ZBED8 Buster3|C5orf54 zinc finger BED-type containing 8 protein-coding chr11-784 chr11 8068583 8068827 + 23.1 0.000 non-coding (NR_120537, exon 4 of 4) non-coding (NR_120537, exon 4 of 4) 8667 NR_120537 101927917 Hs.680586 NR_120537 ENSG00000248332 TUB-AS1 - TUB antisense RNA 1 ncRNA chr3-327 chr3 14415665 14415909 + 23.1 0.000 intron (NR_103507, intron 1 of 13) intron (NR_103507, intron 1 of 13) 13181 NR_103507 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr5-529 chr5 34529371 34529615 + 23.1 0.000 Intergenic Intergenic -126835 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr10-359 chr10 29392413 29392657 + 23.1 0.000 Intergenic L1MC4|LINE|L1 -16999 NR_110923 102724316 Hs.499209 NR_003930 ENSG00000224597 SVIL-AS1 - SVIL antisense RNA 1 ncRNA chr1-1751 chr1 45892505 45892749 + 23.1 0.000 intron (NM_001324320, intron 4 of 29) MER92-int|LTR|ERV1 28279 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr15-588 chr15 76185779 76186023 + 23.1 0.000 intron (NM_152335, intron 8 of 10) MIR3|SINE|MIR -4415 NR_120360 101929439 Hs.631721 NR_120360 ENSG00000259422 LOC101929439 - uncharacterized LOC101929439 ncRNA chr9-501 chr9 6566480 6566724 + 23.1 0.000 intron (NM_000170, intron 15 of 24) intron (NM_000170, intron 15 of 24) 79090 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr4-555 chr4 149113994 149114238 + 23.1 0.000 Intergenic Intergenic -40179 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA chr2-1134 chr2 167134688 167134932 + 23.1 0.000 intron (NR_046665, intron 1 of 1) MER44B|DNA|TcMar-Tigger 6145 NR_046665 100874011 NR_046665 XIRP2-AS1 - XIRP2 antisense RNA 1 ncRNA chr7-702 chr7 19368643 19368887 + 23.1 0.000 Intergenic Intergenic -223344 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding chr11-658 chr11 44178577 44178821 + 23.1 0.000 intron (NM_207122, intron 8 of 13) intron (NM_207122, intron 8 of 13) 82502 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr6-178 chr6 131063131 131063375 + 23.1 0.000 promoter-TSS (NM_001199388) promoter-TSS (NM_001199388) -8 NM_001431 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr19-1358 chr19 29780918 29781162 + 23.0 0.000 Intergenic (GAAT)n|Simple_repeat|Simple_repeat -30951 NM_001322259 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr9-335 chr9 111599485 111599729 + 23.0 0.000 promoter-TSS (NM_012212) promoter-TSS (NM_012212) 40 NM_001146108 22949 Hs.584864 NM_012212 ENSG00000106853 PTGR1 LTB4DH|PGR1|ZADH3 prostaglandin reductase 1 protein-coding chr11-443 chr11 117907276 117907520 + 23.0 0.000 TTS (NM_001206790) TTS (NM_001206790) 22004 NM_001244995 84000 Hs.266308 NM_032046 ENSG00000137747 TMPRSS13 MSP|MSPL|MSPS|TMPRSS11 transmembrane serine protease 13 protein-coding chr7-948 chr7 45088280 45088524 + 23.0 0.000 intron (NM_001146334, intron 1 of 7) CpG 567 NM_001146334 23148 Hs.96633 NM_001146334 ENSG00000136274 NACAD - NAC alpha domain containing protein-coding chr1-938 chr1 62325218 62325462 + 23.0 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -5906 NM_001320269 163782 Hs.283398 NM_181712 ENSG00000132854 KANK4 ANKRD38|dJ1078M7.1 KN motif and ankyrin repeat domains 4 protein-coding chr18-290 chr18 420973 421217 + 23.0 0.000 intron (NM_130386, intron 2 of 9) intron (NM_130386, intron 2 of 9) 79606 NM_130386 81035 Hs.464422 NM_030781 ENSG00000158270 COLEC12 CLP1|NSR2|SCARA4|SRCL collectin subfamily member 12 protein-coding chr20-320 chr20 19460323 19460567 + 23.0 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -175849 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr10-589 chr10 82942614 82942858 + 23.0 0.000 intron (NR_163253, intron 6 of 10) intron (NR_163253, intron 6 of 10) -709816 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr22-330 chr22 37259614 37259858 + 23.0 0.000 Intergenic CpG -15467 NM_002872 5880 Hs.517601 NM_002872 ENSG00000128340 RAC2 EN-7|Gx|HSPC022|p21-Rac2 Rac family small GTPase 2 protein-coding chr3-393 chr3 33250798 33251042 + 23.0 0.000 Intergenic L1MC4|LINE|L1 -26105 NM_001349323 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding chr1-584 chr1 27011041 27011285 + 23.0 0.000 intron (NM_052943, intron 1 of 1) intron (NM_052943, intron 1 of 1) 1687 NM_052943 115572 Hs.632378 NM_052943 ENSG00000158246 TENT5B FAM46B terminal nucleotidyltransferase 5B protein-coding chr1-1036 chr1 58699843 58700087 + 23.0 0.000 promoter-TSS (NM_001085487) promoter-TSS (NM_001085487) 97 NM_001085487 114803 Hs.744921 NM_001085487 ENSG00000162601 MYSM1 2A-DUB|2ADUB|BMFS4 Myb like, SWIRM and MPN domains 1 protein-coding chr9-1014 chr9 134681100 134681344 + 23.0 0.000 intron (NM_001278074, intron 1 of 65) intron (NM_001278074, intron 1 of 65) -28379 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr1-1629 chr1 3127487 3127731 + 23.0 0.000 promoter-TSS (NR_036215) promoter-TSS (NR_036215) -366 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-599 chr10 126397986 126398230 + 23.0 0.000 Intergenic Intergenic -9631 NM_003474 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr10-445 chr10 117653218 117653462 + 23.0 0.000 Intergenic Intergenic -108272 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr15-336 chr15 78149502 78149746 + 23.0 0.000 intron (NM_005530, intron 1 of 10) CpG 262 NM_005530 3419 Hs.591110 NM_005530 ENSG00000166411 IDH3A - isocitrate dehydrogenase (NAD(+)) 3 alpha protein-coding chr21-115 chr21 39349367 39349611 + 23.0 0.000 promoter-TSS (NM_004965) promoter-TSS (NM_004965) -401 NM_004965 3150 Hs.356285 NM_004965 ENSG00000205581 HMGN1 HMG14 high mobility group nucleosome binding domain 1 protein-coding chr18-365 chr18 80027890 80028134 + 23.0 0.000 intron (NM_001305564, intron 1 of 2) PRIMA4-int|LTR|ERV1 5924 NM_001305564 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding chr10-840 chr10 60348969 60349213 + 23.0 0.000 intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 40784 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr10-927 chr10 119315204 119315448 + 23.0 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) -62646 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA chr5-415 chr5 73655599 73655843 + 23.0 0.000 intron (NM_001177693, intron 1 of 35) intron (NM_001177693, intron 1 of 35) 29563 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr6-407 chr6 82711969 82712213 + 23.0 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 347847 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr3-449 chr3 112641090 112641334 + 23.0 0.000 promoter-TSS (NM_199511) promoter-TSS (NM_199511) -69 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr9-420 chr9 16986008 16986252 + 23.0 0.000 Intergenic Intergenic -115460 NM_001317940 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding chr22-290 chr22 42990151 42990395 + 23.0 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 24876 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr19-570 chr19 2462014 2462258 + 23.0 0.000 promoter-TSS (NR_134931) promoter-TSS (NR_134931) 49 NR_134931 101928602 Hs.541407 NR_134931 ENSG00000267201 LINC01775 - long intergenic non-protein coding RNA 1775 ncRNA chrX-317 chrX 97828141 97828385 + 23.0 0.000 Intergenic MIR|SINE|MIR -263728 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr12-849 chr12 57890026 57890270 + 23.0 0.000 intron (NR_148947, intron 1 of 3) intron (NR_148947, intron 1 of 3) 6334 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr9-346 chr9 136954255 136954499 + 23.0 0.000 intron (NM_178536, intron 5 of 5) intron (NM_178536, intron 5 of 5) 2104 NM_178536 286256 Hs.440519 NM_178536 ENSG00000184925 LCN12 - lipocalin 12 protein-coding chr6-367 chr6 711250 711494 + 23.0 0.000 Intergenic Intergenic -18231 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding chr9-327 chr9 16726835 16727079 + 23.0 0.000 intron (NR_151723, intron 1 of 2) CpG 143 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr3-751 chr3 100603478 100603722 + 23.0 0.000 Intergenic Intergenic -6001 NM_032787 84873 Hs.334511 NM_032787 ENSG00000144820 ADGRG7 GPR128 adhesion G protein-coupled receptor G7 protein-coding chr20-224 chr20 5610819 5611063 + 23.0 0.000 promoter-TSS (NM_019593) promoter-TSS (NM_019593) 65 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding chr1-1713 chr1 31712804 31713048 + 23.0 0.000 Intergenic MIR|SINE|MIR -8909 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr8-314 chr8 133237909 133238153 + 23.0 0.000 3' UTR (NM_001258432, exon 14 of 14) 3' UTR (NM_001258432, exon 14 of 14) 46992 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding chr4-498 chr4 2930817 2931061 + 23.0 0.000 TTS (NM_001354754) TTS (NM_001354754) 3298 NM_001120 10227 Hs.632581 NM_001120 ENSG00000109736 MFSD10 TETRAN|TETTRAN major facilitator superfamily domain containing 10 protein-coding chr2-942 chr2 47521175 47521419 + 23.0 0.000 exon (NM_022055, exon 2 of 2) exon (NM_022055, exon 2 of 2) -6240 NR_120602 644093 Hs.734158 NR_120602 ENSG00000235760 HCG2040054 - uncharacterized LOC644093 ncRNA chr5-1038 chr5 56942116 56942360 + 23.0 0.000 intron (NM_001297598, intron 3 of 12) L2|LINE|L2 9892 NM_001297599 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr6-380 chr6 25054332 25054576 + 23.0 0.000 Intergenic Intergenic -12166 NM_001286446 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr5-731 chr5 33470588 33470832 + 23.0 0.000 Intergenic Intergenic 29934 NM_001258438 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr12-772 chr12 109819139 109819383 + 23.0 0.000 intron (NM_021625, intron 1 of 15) intron (NM_021625, intron 1 of 15) -4434 NM_001177428 59341 Hs.506713 NM_021625 ENSG00000111199 TRPV4 BCYM3|CMT2C|HMSN2C|OTRPC4|SMAL|SPSMA|SSQTL1|TRP12|VRL2|VROAC transient receptor potential cation channel subfamily V member 4 protein-coding chr14-259 chr14 53881154 53881398 + 23.0 0.000 Intergenic Intergenic 67208 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr3-1244 chr3 37771308 37771552 + 23.0 0.000 intron (NR_110531, intron 3 of 3) intron (NR_110531, intron 3 of 3) 90350 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr7-949 chr7 46317353 46317597 + 23.0 0.000 Intergenic Intergenic 379647 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr19-549 chr19 16542573 16542817 + 23.0 0.000 promoter-TSS (NM_006387) promoter-TSS (NM_006387) -258 NM_006387 10523 Hs.740364 NM_006387 ENSG00000085872 CHERP DAN16|SCAF6|SRA1 calcium homeostasis endoplasmic reticulum protein protein-coding chr15-404 chr15 85094722 85094966 + 23.0 0.000 intron (NM_001243137, intron 8 of 21) intron (NM_001243137, intron 8 of 21) 112870 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr17-489 chr17 42659239 42659483 + 23.0 0.000 promoter-TSS (NM_016437) promoter-TSS (NM_016437) 77 NM_016437 27175 Hs.279669 NM_016437 ENSG00000037042 TUBG2 - tubulin gamma 2 protein-coding chr14-522 chr14 45833597 45833841 + 23.0 0.000 Intergenic SATR1|Satellite|Satellite -118117 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr10-719 chr10 12333995 12334239 + 23.0 0.000 Intergenic Intergenic -15430 NM_020397 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr17-679 chr17 8479469 8479713 + 23.0 0.000 intron (NM_001256012, intron 40 of 42) intron (NM_001256012, intron 40 of 42) 43707 NM_001330129 81565 Hs.372123 NM_030808 ENSG00000166579 NDEL1 EOPA|MITAP1|NDE1L1|NDE2|NUDEL nudE neurodevelopment protein 1 like 1 protein-coding chr4-847 chr4 145493608 145493852 + 23.0 0.000 intron (NM_001354817, intron 1 of 6) L2a|LINE|L2 9250 NR_108077 101927659 Hs.519005 NR_108077 ENSG00000250582 SMAD1-AS2 - SMAD1 antisense RNA 2 ncRNA chr1-880 chr1 161045781 161046025 + 23.0 0.000 promoter-TSS (NM_207005) promoter-TSS (NM_207005) 74 NM_207005 7391 Hs.414880 NM_007122 ENSG00000158773 USF1 FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 upstream transcription factor 1 protein-coding chr6-332 chr6 149922984 149923228 + 23.0 0.000 promoter-TSS (NM_001001788) promoter-TSS (NM_001001788) 15 NM_001001788 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chr11-525 chr11 76617559 76617803 + 23.0 0.000 Intergenic Intergenic 52257 NM_001370188 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding chr4-1076 chr4 141802359 141802603 + 23.0 0.000 Intergenic Intergenic 165898 NM_000585 3600 Hs.168132 NM_000585 ENSG00000164136 IL15 IL-15 interleukin 15 protein-coding chr6-465 chr6 115613441 115613685 + 23.0 0.000 Intergenic L4_C_Mam|LINE|RTE-X 30272 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA chr4-135 chr4 143336236 143336480 + 23.0 0.000 promoter-TSS (NM_002039) promoter-TSS (NM_002039) -518 NM_002039 2549 Hs.80720 NM_002039 ENSG00000109458 GAB1 DFNB26 GRB2 associated binding protein 1 protein-coding chr1-840 chr1 52033317 52033561 + 23.0 0.000 non-coding (NR_046405, exon 3 of 3) non-coding (NR_046405, exon 3 of 3) 371 NM_138417 112970 Hs.476033 NM_138417 ENSG00000198841 KTI12 SBBI81|TOT4 KTI12 chromatin associated homolog protein-coding chr2-998 chr2 166167535 166167779 + 23.0 0.000 intron (NR_110260, intron 2 of 11) intron (NR_110260, intron 2 of 11) -18496 NM_001202435 6323 Hs.22654 NM_006920 ENSG00000144285 SCN1A EIEE6|FEB3|FEB3A|FHM3|GEFSP2|HBSCI|NAC1|Nav1.1|SCN1|SMEI sodium voltage-gated channel alpha subunit 1 protein-coding chr6-145 chr6 79233862 79234106 + 23.0 0.000 intron (NR_040671, intron 1 of 1) CpG 310 NR_040671 100288198 Hs.586270 NR_040671 ENSG00000270362 HMGN3-AS1 - HMGN3 antisense RNA 1 ncRNA chr4-722 chr4 96354078 96354322 + 23.0 0.000 intron (NR_147149, intron 1 of 3) intron (NR_147149, intron 1 of 3) 43497 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr5-372 chr5 60633455 60633699 + 23.0 0.000 intron (NM_001145208, intron 7 of 9) MLT1H|LTR|ERVL-MaLR 66589 NM_001145208 55789 Hs.482233 NM_018369 ENSG00000035499 DEPDC1B BRCC3|XTP1 DEP domain containing 1B protein-coding chr13-244 chr13 47114110 47114354 + 23.0 0.000 Intergenic Intergenic -217156 NM_001165947 3356 Hs.72630 NM_000621 ENSG00000102468 HTR2A 5-HT2A|HTR2 5-hydroxytryptamine receptor 2A protein-coding chr22-115 chr22 23521769 23522013 + 23.0 0.000 Intergenic CpG -16211 NR_109832 101978785 Hs.575107 NR_109832 PCAT14 - prostate cancer associated transcript 14 ncRNA chr17-1300 chr17 39770025 39770269 + 23.0 0.000 intron (NM_001257413, intron 3 of 3) intron (NM_001257413, intron 3 of 3) 8078 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chrY-4 chrY 11721896 11722140 + 23.0 0.000 Intergenic (GAATG)n|Satellite|Satellite 699572 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr9-1227 chr9 78342633 78342877 + 23.0 0.000 Intergenic Intergenic 45630 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr3-542 chr3 177529876 177530120 + 23.0 0.000 intron (NR_047568, intron 1 of 3) intron (NR_047568, intron 1 of 3) 88077 NR_047568 100505566 Hs.581170 NR_047568 LINC00578 - long intergenic non-protein coding RNA 578 ncRNA chr2-1075 chr2 31270227 31270471 + 23.0 0.000 TTS (NM_014600) TTS (NM_014600) 36197 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding chr8-458 chr8 131856727 131856971 + 23.0 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -47244 NR_136616 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr19-1591 chr19 36070603 36070847 + 23.0 0.000 intron (NM_001083961, intron 7 of 31) Kanga11a|DNA|TcMar-Tc2 15828 NM_001083961 284403 Hs.116244 NM_173636 ENSG00000075702 WDR62 C19orf14|MCPH2 WD repeat domain 62 protein-coding chr2-1280 chr2 95334006 95334250 + 23.0 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) -12530 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr11-762 chr11 102267681 102267925 + 23.0 0.000 Intergenic Intergenic -49681 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr12-221 chr12 38906725 38906969 + 23.0 0.000 Intergenic CpG -1256 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding chrX-433 chrX 30442802 30443046 + 23.0 0.000 Intergenic L1PA13|LINE|L1 -133534 NM_000475 190 Hs.268490 NM_000475 ENSG00000169297 NR0B1 AHC|AHCH|AHX|DAX-1|DAX1|DSS|GTD|HHG|NROB1|SRXY2 nuclear receptor subfamily 0 group B member 1 protein-coding chr5-1087 chr5 119418277 119418521 + 23.0 0.000 Intergenic Intergenic -34098 NM_001199292 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr11-670 chr11 67438494 67438738 + 23.0 0.000 promoter-TSS (NM_005608) promoter-TSS (NM_005608) -934 NM_005608 5790 Hs.155975 NM_005608 ENSG00000213402 PTPRCAP CD45-AP|LPAP protein tyrosine phosphatase receptor type C associated protein protein-coding chr15-89 chr15 40569162 40569406 + 23.0 0.000 promoter-TSS (NM_001286407) promoter-TSS (NM_001286407) -9 NM_001286407 27079 Hs.173311 NM_152260 ENSG00000166133 RPUSD2 C15orf19|C18B11|PUS9 RNA pseudouridine synthase domain containing 2 protein-coding chr1-1306 chr1 28755784 28756028 + 23.0 0.000 intron (NM_001173128, intron 5 of 5) Tigger4a|DNA|TcMar-Tigger 18966 NM_001172828 51441 Hs.532286 NM_016258 ENSG00000198492 YTHDF2 CAHL|HGRG8|NY-REN-2 YTH N6-methyladenosine RNA binding protein 2 protein-coding chr12-1145 chr12 59534919 59535163 + 23.0 0.000 Intergenic SATR2|Satellite|Satellite -60988 NM_001270622 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr2-1404 chr2 235570270 235570514 + 23.0 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -52471 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr2-777 chr2 159135866 159136110 + 22.8 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -50847 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr8-328 chr8 17155647 17155891 + 22.8 0.000 promoter-TSS (NM_016353) promoter-TSS (NM_016353) -713 NM_016353 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr16-834 chr16 61515566 61515810 + 22.8 0.000 Intergenic Intergenic -459922 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA chr19-1070 chr19 11089331 11089575 + 22.8 0.000 promoter-TSS (NM_000527) promoter-TSS (NM_000527) -10 NM_001195798 3949 Hs.213289 NM_000527 ENSG00000130164 LDLR FH|FHC|LDLCQ2 low density lipoprotein receptor protein-coding chr22-629 chr22 23218734 23218978 + 22.8 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) 38347 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr18-132 chr18 7084228 7084472 + 22.8 0.000 intron (NM_005559, intron 1 of 62) intron (NM_005559, intron 1 of 62) 33447 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding chr3-1042 chr3 158075358 158075602 + 22.8 0.000 Intergenic MIRb|SINE|MIR 30683 NM_003030 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr1-1044 chr1 77900716 77900960 + 22.8 0.000 intron (NM_001172309, intron 1 of 11) intron (NM_001172309, intron 1 of 11) -11299 NR_103535 374987 Hs.632414 NM_199343 ENSG00000235927 NEXN-AS1 C1orf118 NEXN antisense RNA 1 ncRNA chr4-1047 chr4 109009879 109010123 + 22.8 0.000 intron (NM_198721, intron 5 of 36) intron (NM_198721, intron 5 of 36) -246948 NM_001331033 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr7-914 chr7 12582059 12582303 + 22.8 0.000 intron (NR_156701, intron 3 of 14) MIR|SINE|MIR -7342 NM_033128 85477 Hs.633359 NM_033128 ENSG00000006747 SCIN - scinderin protein-coding chr12-852 chr12 65169598 65169842 + 22.8 0.000 exon (NM_001167614, exon 1 of 13) exon (NM_001167614, exon 1 of 13) 137 NM_014319 23592 Hs.744150 NM_014319 ENSG00000174106 LEMD3 MAN1 LEM domain containing 3 protein-coding chr7-612 chr7 2348060 2348304 + 22.8 0.000 Intergenic Intergenic -5904 NM_001362792 8662 Hs.371001 NM_003751 ENSG00000106263 EIF3B EIF3-ETA|EIF3-P110|EIF3-P116|EIF3S9|PRT1 eukaryotic translation initiation factor 3 subunit B protein-coding chr17-881 chr17 70168694 70168938 + 22.8 0.000 promoter-TSS (NM_000891) promoter-TSS (NM_000891) 586 NR_036534 400617 Hs.225661 NR_036534 ENSG00000267365 KCNJ2-AS1 - KCNJ2 antisense RNA 1 ncRNA chr3-1078 chr3 188747577 188747821 + 22.8 0.000 intron (NM_001167672, intron 6 of 9) intron (NM_001167672, intron 6 of 9) 58918 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA chr7-365 chr7 539918 540162 + 22.8 0.000 Intergenic Intergenic 19649 NR_033963 441307 Hs.521334 NR_033963 ENSG00000223855 HRAT92 - heart tissue-associated transcript 92 ncRNA chr7-728 chr7 45645351 45645595 + 22.8 0.000 intron (NM_001281768, intron 5 of 9) intron (NM_001281768, intron 5 of 9) 71105 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr22-557 chr22 19132595 19132839 + 22.8 0.000 TTS (NM_053006) TTS (NM_053006) 1409 NM_053006 23617 Hs.694070 NM_053006 ENSG00000206203 TSSK2 DGS-G|SPOGA2|STK22B|TSK2 testis specific serine kinase 2 protein-coding chr2-1740 chr2 75239079 75239323 + 22.8 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -39681 NM_001058 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr12-761 chr12 93677124 93677368 + 22.8 0.000 promoter-TSS (NM_001320101) promoter-TSS (NM_001320101) -125 NM_001320100 8738 Hs.38533 NM_003805 ENSG00000169372 CRADD MRT34|RAIDD CASP2 and RIPK1 domain containing adaptor with death domain protein-coding chr1-2692 chr1 246139716 246139960 + 22.8 0.000 intron (NM_022743, intron 5 of 11) Tigger19a|DNA|TcMar-Tigger 277574 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr19-523 chr19 49862872 49863116 + 22.8 0.000 intron (NM_007254, intron 8 of 16) CpG-14959 -3705 NR_110730 101928378 Hs.710295 NR_110730 PTOV1-AS2 - PTOV1 antisense RNA 2 ncRNA chr12-385 chr12 132762141 132762385 + 22.8 0.000 promoter-TSS (NM_015114) promoter-TSS (NM_015114) -431 NM_015114 23141 Hs.654628 NM_015114 ENSG00000176915 ANKLE2 KIAA0692|LEMD7|Lem4|MCPH16 ankyrin repeat and LEM domain containing 2 protein-coding chr22-465 chr22 50483506 50483750 + 22.8 0.000 3' UTR (NM_001253845, exon 3 of 3) 3' UTR (NM_001253845, exon 3 of 3) 2085 NM_001369882 79924 Hs.449099 NM_024866 ENSG00000128165 ADM2 AM2|dJ579N16.4 adrenomedullin 2 protein-coding chr19-260 chr19 9785882 9786126 + 22.8 0.000 5' UTR (NM_001353800, exon 1 of 7) 5' UTR (NM_001353800, exon 1 of 7) 179 NM_001353800 162993 Hs.665717 NM_001077624 ENSG00000196605 ZNF846 - zinc finger protein 846 protein-coding chr1-387 chr1 109042020 109042264 + 22.8 0.000 promoter-TSS (NM_001142550) promoter-TSS (NM_001142550) 86 NM_001142551 22911 Hs.570055 NM_014969 ENSG00000085433 WDR47 - WD repeat domain 47 protein-coding chr2-611 chr2 57720924 57721168 + 22.8 0.000 Intergenic Intergenic -186605 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr12-620 chr12 12725187 12725431 + 22.8 0.000 promoter-TSS (NM_001130415) promoter-TSS (NM_001130415) -608 NM_001130415 81575 Hs.23388 NM_030817 ENSG00000178878 APOLD1 VERGE apolipoprotein L domain containing 1 protein-coding chr15-151 chr15 41116130 41116374 + 22.8 0.000 promoter-TSS (NR_104038) promoter-TSS (NR_104038) -6 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding chr13-142 chr13 42049201 42049445 + 22.8 0.000 intron (NM_178009, intron 1 of 29) CpG-6631 675 NM_152910 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr5-1088 chr5 119452338 119452582 + 22.8 0.000 promoter-TSS (NM_001292028) promoter-TSS (NM_001292028) -37 NM_001199292 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chrX-166 chrX 97563701 97563945 + 22.8 0.000 intron (NR_125391, intron 1 of 2) CR1_Mam|LINE|CR1 712 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr14-397 chr14 29144707 29144951 + 22.8 0.000 Intergenic Intergenic -359042 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr8-450 chr8 88120638 88120882 + 22.8 0.000 intron (NM_005941, intron 4 of 9) intron (NM_005941, intron 4 of 9) 206723 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr15-717 chr15 80489384 80489628 + 22.8 0.000 intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 73438 NR_120363 101929586 Hs.569426 NR_120363 ENSG00000259175 LOC101929586 - uncharacterized LOC101929586 ncRNA chr19-547 chr19 16103570 16103814 + 22.8 0.000 TTS (NM_001145160) TTS (NM_001145160) -8197 NM_005370 4218 Hs.642874 NM_005370 ENSG00000167461 RAB8A MEL|RAB8 RAB8A, member RAS oncogene family protein-coding chr18-161 chr18 22873067 22873311 + 22.8 0.000 Intergenic MSTA|LTR|ERVL-MaLR -60139 NM_002894 5932 Hs.546282 NM_002894 ENSG00000101773 RBBP8 COM1|CTIP|JWDS|RIM|SAE2|SCKL2 RB binding protein 8, endonuclease protein-coding chr5-1078 chr5 108148818 108149062 + 22.8 0.000 intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) 233158 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr2-415 chr2 177392781 177393025 + 22.8 0.000 promoter-TSS (NR_026966) promoter-TSS (NR_026966) 130 NM_003659 8540 Hs.516543 NM_003659 ENSG00000018510 AGPS ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY|RCDP3 alkylglycerone phosphate synthase protein-coding chr1-290 chr1 15847609 15847853 + 22.8 0.000 promoter-TSS (NM_015001) promoter-TSS (NM_015001) 24 NM_015001 23013 Hs.744843 NM_015001 ENSG00000065526 SPEN HIAA0929|MINT|RBM15C|SHARP spen family transcriptional repressor protein-coding chr12-666 chr12 71045914 71046158 + 22.8 0.000 Intergenic Intergenic 111773 NM_001369760 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr2-895 chr2 19711600 19711844 + 22.8 0.000 Intergenic UCON78|DNA|DNA -157132 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA chr2-1406 chr2 237045609 237045853 + 22.8 0.000 Intergenic Intergenic 10436 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr10-885 chr10 93991957 93992201 + 22.8 0.000 Intergenic Intergenic -1852 NM_016341 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr11-1133 chr11 65057776 65058020 + 22.8 0.000 exon (NM_005468, exon 3 of 18) exon (NM_005468, exon 3 of 18) 655 NM_005468 10004 Hs.13967 NM_005468 ENSG00000168060 NAALADL1 I100|NAALADASEL N-acetylated alpha-linked acidic dipeptidase like 1 protein-coding chr6-478 chr6 3162570 3162814 + 22.8 0.000 Intergenic CpG -5148 NM_001310315 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr13-419 chr13 114196270 114196514 + 22.8 0.000 Intergenic Intergenic -38453 NM_003903 8881 Hs.374127 NM_003903 ENSG00000130177 CDC16 ANAPC6|APC6|CDC16Hs|CUT9 cell division cycle 16 protein-coding chr16-302 chr16 11915910 11916154 + 22.8 0.000 promoter-TSS (NM_001130006) promoter-TSS (NM_001130006) -76 NM_001130006 2935 Hs.528780 NM_002094 ENSG00000103342 GSPT1 551G9.2|ETF3A|GST1|eRF3a G1 to S phase transition 1 protein-coding chr15-178 chr15 63950973 63951217 + 22.8 0.000 intron (NM_014326, intron 4 of 11) intron (NM_014326, intron 4 of 11) 22821 NR_120344 101928988 Hs.673214 NR_120344 ENSG00000259351 LOC101928988 - uncharacterized LOC101928988 ncRNA chr17-596 chr17 17414447 17414691 + 22.8 0.000 Intergenic Intergenic -62431 NM_018019 55090 Hs.244595 NM_018019 ENSG00000141026 MED9 MED25 mediator complex subunit 9 protein-coding chr1-2033 chr1 45847235 45847479 + 22.8 0.000 intron (NM_001324320, intron 3 of 29) intron (NM_001324320, intron 3 of 29) -16991 NM_001324321 23139 Hs.319481 NM_015112 ENSG00000086015 MAST2 MAST205|MTSSK microtubule associated serine/threonine kinase 2 protein-coding chr19-633 chr19 40444513 40444757 + 22.8 0.000 promoter-TSS (NM_203344) promoter-TSS (NM_203344) -300 NM_203344 29946 Hs.515412 NM_013368 ENSG00000167565 SERTAD3 RBT1 SERTA domain containing 3 protein-coding chr1-833 chr1 44294680 44294924 + 22.8 0.000 intron (NM_001301698, intron 5 of 7) intron (NM_001301698, intron 5 of 7) -42243 NR_132966 106635545 NR_132966 SNORA110 - small nucleolar RNA, H/ACA box 110 snoRNA chr14-640 chr14 69138465 69138709 + 22.8 0.000 intron (NM_003861, intron 1 of 8) intron (NM_003861, intron 1 of 8) 14012 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr8-147 chr8 142952110 142952354 + 22.8 0.000 Intergenic Intergenic -34389 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr19-528 chr19 53193215 53193459 + 22.8 0.000 promoter-TSS (NM_001353459) promoter-TSS (NM_001353459) 21 NM_001353459 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr19-799 chr19 15429625 15429869 + 22.8 0.000 exon (NM_001330395, exon 3 of 8) exon (NM_001330395, exon 3 of 8) 2787 NM_001330395 58525 Hs.442138 NM_021241 ENSG00000011451 WIZ ZNF803 WIZ zinc finger protein-coding chr4-354 chr4 154989649 154989893 + 22.8 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 208266 NM_001277173 166863 Hs.133095 NM_144979 ENSG00000151962 RBM46 CT68 RNA binding motif protein 46 protein-coding chr1-1342 chr1 55057823 55058067 + 22.8 0.000 intron (NM_174936, intron 7 of 11) (GT)n|Simple_repeat|Simple_repeat 17723 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr5-906 chr5 99202763 99203007 + 22.8 0.000 Intergenic SATR1|Satellite|Satellite -273171 NR_157079 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding chr17-551 chr17 44070619 44070863 + 22.8 0.000 promoter-TSS (NM_001319945) promoter-TSS (NM_001319945) 11 NM_138387 92579 Hs.294005 NM_138387 ENSG00000141349 G6PC3 SCN4|UGRP glucose-6-phosphatase catalytic subunit 3 protein-coding chr5-187 chr5 179907997 179908241 + 22.8 0.000 promoter-TSS (NM_015043).2 promoter-TSS (NM_015043).2 -222 NM_198868 23061 Hs.155829 NM_015043 ENSG00000197226 TBC1D9B GRAMD9B TBC1 domain family member 9B protein-coding chr11-993 chr11 61870472 61870716 + 22.8 0.000 Intergenic MamTip2|DNA|hAT-Tip100 7684 NR_106804 102465446 NR_106804 ENSG00000277892 MIR6746 hsa-mir-6746 microRNA 6746 ncRNA chr18-142 chr18 57542905 57543149 + 22.8 0.000 Intergenic Intergenic 43675 NM_001371094 chr12-432 chr12 103560637 103560881 + 22.8 0.000 TTS (NR_110103) TTS (NR_110103) 12965 NR_110103 101929084 Hs.440981 NR_110103 ENSG00000257762 LINC02401 - long intergenic non-protein coding RNA 2401 ncRNA chrX-378 chrX 63350435 63350679 + 22.8 0.000 exon (NM_001012968, exon 1 of 1) exon (NM_001012968, exon 1 of 1) 775 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding chr11-1438 chr11 29185608 29185852 + 22.8 0.000 Intergenic Intergenic -408683 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr7-755 chr7 92767538 92767782 + 22.8 0.000 intron (NM_001259, intron 3 of 7) intron (NM_001259, intron 3 of 7) 66299 NM_001259 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr17-550 chr17 40284366 40284610 + 22.8 0.000 TTS (NM_133264) TTS (NM_133264) -3391 NM_001254 990 Hs.405958 NM_001254 ENSG00000094804 CDC6 CDC18L|HsCDC18|HsCDC6|MGORS5 cell division cycle 6 protein-coding chr11-1053 chr11 3085171 3085415 + 22.8 0.000 Intergenic Intergenic -27870 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr2-1096 chr2 69934259 69934503 + 22.8 0.000 intron (NM_001202513, intron 3 of 5) intron (NM_001202513, intron 3 of 5) 19272 NM_002357 4084 Hs.468908 NM_002357 ENSG00000059728 MXD1 BHLHC58|MAD|MAD1 MAX dimerization protein 1 protein-coding chr9-637 chr9 18906676 18906920 + 22.8 0.000 exon (NM_001040272, exon 28 of 29) exon (NM_001040272, exon 28 of 29) 126411 NM_001287050 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr2-300 chr2 191677942 191678186 + 22.8 0.000 promoter-TSS (NM_001254736) promoter-TSS (NM_001254736) -8 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr11-681 chr11 116787720 116787964 + 22.8 0.000 exon (NM_001317086, exon 1 of 13) exon (NM_001317086, exon 1 of 13) 181 NM_003904 8882 Hs.7165 NM_003904 ENSG00000109917 ZPR1 ZNF259 ZPR1 zinc finger protein-coding chr11-1550 chr11 67261164 67261408 + 22.8 0.000 Intergenic MIRc|SINE|MIR -5187 NM_001619 156 Hs.83636 NM_001619 ENSG00000173020 GRK2 ADRBK1|BARK1|BETA-ARK1 G protein-coupled receptor kinase 2 protein-coding chr16-263 chr16 69132466 69132710 + 22.8 0.000 promoter-TSS (NM_032830) promoter-TSS (NM_032830) 0 NM_001366603 113455421 Hs.85962 NM_001002847 DERPC CHTF8 DERPC proline and glycine rich nuclear protein protein-coding chr1-1781 chr1 84698250 84698494 + 22.7 0.000 Intergenic Intergenic -7904 NM_001166295 117178 Hs.22587 NM_014021 ENSG00000117155 SSX2IP ADIP|hMsd1 SSX family member 2 interacting protein protein-coding chr17-458 chr17 77386320 77386564 + 22.7 0.000 intron (NM_001113494, intron 1 of 10) intron (NM_001113494, intron 1 of 10) 10359 NM_001113494 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr20-283 chr20 60249525 60249769 + 22.7 0.000 intron (NR_046099, intron 3 of 4) MER5A|DNA|hAT-Charlie -58827 NR_030376 693231 NR_030376 ENSG00000207802 MIR646 MIRN646|hsa-mir-646 microRNA 646 ncRNA chr22-213 chr22 43385686 43385930 + 22.7 0.000 Intergenic Intergenic -14523 NR_146918 105373054 NR_146918 ENSG00000236117 LINC01639 - long intergenic non-protein coding RNA 1639 ncRNA chr13-252 chr13 73235747 73235991 + 22.7 0.000 Intergenic Intergenic 176864 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr9-1056 chr9 5091287 5091531 + 22.7 0.000 intron (NM_004972, intron 22 of 24) intron (NM_004972, intron 22 of 24) 49716 NM_001322204 3717 Hs.656213 NM_004972 ENSG00000096968 JAK2 JTK10|THCYT3 Janus kinase 2 protein-coding chr2-593 chr2 26018151 26018395 + 22.7 0.000 Intergenic Intergenic -15811 NM_016131 10890 Hs.467960 NM_016131 ENSG00000084733 RAB10 - RAB10, member RAS oncogene family protein-coding chr1-1953 chr1 238410034 238410278 + 22.7 0.000 Intergenic Intergenic 75861 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA chr21-83 chr21 42315332 42315576 + 22.7 0.000 5' UTR (NM_003226, exon 1 of 3) 5' UTR (NM_003226, exon 1 of 3) 142 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr1-948 chr1 111755657 111755901 + 22.7 0.000 promoter-TSS (NM_198926) promoter-TSS (NM_198926) 18 NM_198926 55924 Hs.193406 NM_019099 ENSG00000197852 INKA2 C1orf183|FAM212B inka box actin regulator 2 protein-coding chr2-1502 chr2 112259386 112259630 + 22.7 0.000 Intergenic ERVL-E-int|LTR|ERVL -4466 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding chr16-1037 chr16 1942227 1942471 + 22.7 0.000 intron (NM_016332, intron 1 of 3) intron (NM_016332, intron 1 of 3) 977 NM_016332 51734 Hs.655346 NM_016332 ENSG00000198736 MSRB1 HSPC270|SELR|SELX|SEPX1|SepR methionine sulfoxide reductase B1 protein-coding chr9-1369 chr9 132866725 132866969 + 22.7 0.000 intron (NM_001317959, intron 4 of 14) intron (NM_001317959, intron 4 of 14) -11497 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr1-1269 chr1 9884171 9884415 + 22.7 0.000 intron (NM_020248, intron 1 of 5) intron (NM_020248, intron 1 of 5) 25976 NM_020248 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding chr6-695 chr6 82013965 82014209 + 22.7 0.000 intron (NR_149135, intron 3 of 3) MIRc|SINE|MIR -75666 NR_149134 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr2-1203 chr2 25215327 25215571 + 22.7 0.000 Intergenic Intergenic 11136 NR_132378 106144568 Hs.580474 NR_132378 ENSG00000230452 LINC01381 DADOT long intergenic non-protein coding RNA 1381 ncRNA chr3-294 chr3 173395346 173395590 + 22.7 0.000 promoter-TSS (NM_001365923) promoter-TSS (NM_001365923) -484 NM_001365929 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding chr10-963 chr10 241357 241601 + 22.7 0.000 intron (NM_001370109, intron 8 of 13) intron (NM_001370109, intron 8 of 13) 61485 NM_001202468 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr10-701 chr10 132385117 132385361 + 22.7 0.000 Intergenic L1MEj|LINE|L1 -11961 NM_138499 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr12-489 chr12 113889944 113890188 + 22.7 0.000 intron (NM_001146698, intron 21 of 24) intron (NM_001146698, intron 21 of 24) 76259 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr1-426 chr1 225834449 225834693 + 22.7 0.000 intron (NM_001136018, intron 3 of 8) intron (NM_001136018, intron 3 of 8) 9217 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding chr1-1437 chr1 211378886 211379130 + 22.7 0.000 Intergenic Intergenic -3747 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr15-400 chr15 80967475 80967719 + 22.7 0.000 intron (NR_126328, intron 1 of 2) intron (NR_126328, intron 1 of 2) 22222 NM_015154 23184 Hs.578450 NM_015154 ENSG00000117899 MESD BOCA|MESDC2 mesoderm development LRP chaperone protein-coding chr20-251 chr20 3995344 3995588 + 22.7 0.000 intron (NM_001134338, intron 1 of 6) intron (NM_001134338, intron 1 of 6) 20092 NM_001134338 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr4-1013 chr4 84938327 84938571 + 22.7 0.000 intron (NM_014991, intron 1 of 67) intron (NM_014991, intron 1 of 67) -27167 NR_152772 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr17-384 chr17 82247053 82247297 + 22.7 0.000 intron (NM_139062, intron 8 of 9) intron (NM_139062, intron 8 of 9) 10507 NR_106845 102465472 NR_106845 ENSG00000284574 MIR6787 hsa-mir-6787 microRNA 6787 ncRNA chr14-355 chr14 29442830 29443074 + 22.7 0.000 Intergenic Intergenic 484144 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr6-718 chr6 112626809 112627053 + 22.7 0.000 Intergenic MLT1H1|LTR|ERVL-MaLR 279601 NM_001013734 442247 Hs.448264 NM_001013734 ENSG00000251258 RFPL4B RNF211 ret finger protein like 4B protein-coding chr17-303 chr17 81977321 81977565 + 22.7 0.000 promoter-TSS (NM_001251888) promoter-TSS (NM_001251888) -186 NM_001330528 79058 Hs.298351 NM_024083 ENSG00000169696 ASPSCR1 ASPCR1|ASPL|ASPS|RCC17|TUG|UBXD9|UBXN9 ASPSCR1 tether for SLC2A4, UBX domain containing protein-coding chr1-388 chr1 109242769 109243013 + 22.7 0.000 Intergenic L2c|LINE|L2 -6648 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr10-1171 chr10 68332639 68332883 + 22.7 0.000 promoter-TSS (NM_001322449) promoter-TSS (NM_001322449) -52 NM_001322441 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding chr6-1083 chr6 144747311 144747555 + 22.7 0.000 intron (NM_007124, intron 53 of 73) intron (NM_007124, intron 53 of 73) 341778 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr13-135 chr13 113862985 113863229 + 22.7 0.000 intron (NM_000820, intron 2 of 14) CpG 969 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr10-1029 chr10 99742658 99742902 + 22.7 0.000 intron (NM_015960, intron 3 of 8) intron (NM_015960, intron 3 of 8) -10114 NM_078470 1355 Hs.28326 NM_004376 ENSG00000014919 COX15 CEMCOX2 cytochrome c oxidase assembly homolog COX15 protein-coding chr7-503 chr7 32474820 32475064 + 22.7 0.000 Intergenic L1MC5a|LINE|L1 15438 NR_024466 23658 Hs.424908 NM_012322 ENSG00000106355 LSM5 YER146W LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr8-369 chr8 144622646 144622890 + 22.7 0.000 intron (NM_001308208, intron 1 of 10) intron (NM_001308208, intron 1 of 10) -9265 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding chr10-407 chr10 63133359 63133603 + 22.7 0.000 exon (NM_030759, exon 1 of 4) exon (NM_030759, exon 1 of 4) 153 NM_030759 29982 Hs.449628 NM_030759 ENSG00000148572 NRBF2 COPR|COPR1|COPR2|NRBF-2 nuclear receptor binding factor 2 protein-coding chr6-924 chr6 21769467 21769711 + 22.7 0.000 intron (NR_015410, intron 2 of 11) intron (NR_015410, intron 2 of 11) 103176 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr2-1709 chr2 61016866 61017110 + 22.7 0.000 promoter-TSS (NM_002618) promoter-TSS (NM_002618) 224 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding chr2-1254 chr2 69756128 69756372 + 22.7 0.000 intron (NM_001320700, intron 1 of 12) intron (NM_001320700, intron 1 of 12) 14116 NM_001320702 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding chr19-1064 chr19 6220412 6220656 + 22.7 0.000 intron (NM_005934, intron 6 of 11) intron (NM_005934, intron 6 of 11) 59441 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr19-1440 chr19 2253383 2253627 + 22.7 0.000 intron (NM_144616, intron 5 of 6) CpG 2866 NR_036207 100423031 NR_036207 ENSG00000284272 MIR4321 - microRNA 4321 ncRNA chr6-731 chr6 134363271 134363515 + 22.7 0.000 Intergenic Intergenic -45335 NM_001143676 6446 Hs.510078 NM_005627 ENSG00000118515 SGK1 SGK serum/glucocorticoid regulated kinase 1 protein-coding chr2-871 chr2 212646879 212647123 + 22.7 0.000 Intergenic Intergenic -108199 NM_005235 2066 Hs.390729 NM_005235 ENSG00000178568 ERBB4 ALS19|HER4|p180erbB4 erb-b2 receptor tyrosine kinase 4 protein-coding chr11-547 chr11 1445250 1445494 + 22.7 0.000 exon (NM_001256630, exon 10 of 20) exon (NM_001256630, exon 10 of 20) 34220 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr19-1405 chr19 405286 405530 + 22.7 0.000 TTS (NM_001136263) TTS (NM_001136263) 3739 NM_001136263 126567 Hs.223770 NM_001136263 ENSG00000183186 C2CD4C FAM148C|KIAA1957|NLF3 C2 calcium dependent domain containing 4C protein-coding chr13-319 chr13 32324052 32324296 + 22.7 0.000 intron (NM_000059, intron 3 of 26) L2b|LINE|L2 8694 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr10-1307 chr10 122677462 122677706 + 22.7 0.000 intron (NM_001364461, intron 3 of 3) intron (NM_001364461, intron 3 of 3) 4702 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr3-488 chr3 79019438 79019682 + 22.7 0.000 promoter-TSS (NM_133631) promoter-TSS (NM_133631) -101 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding chr14-665 chr14 97611158 97611402 + 22.7 0.000 Intergenic AluJb|SINE|Alu 75378 NR_033943 100129345 Hs.23632 NR_033943 ENSG00000197176 LINC02291 - long intergenic non-protein coding RNA 2291 ncRNA chr3-757 chr3 111316212 111316456 + 22.7 0.000 Intergenic Intergenic -225863 NR_134917 10225 Hs.142023 NM_005816 ENSG00000153283 CD96 TACTILE CD96 molecule protein-coding chr9-562 chr9 134442109 134442353 + 22.7 0.000 Intergenic Intergenic 35671 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr1-1160 chr1 46181791 46182035 + 22.7 0.000 intron (NM_005727, intron 3 of 8) intron (NM_005727, intron 3 of 8) -5425 NM_001303427 110117499 Hs.655387 NM_001303427 ENSG00000278139 LOC110117498-PIK3R3 - LOC110117498-PIK3R3 readthrough protein-coding chr15-379 chr15 62465058 62465302 + 22.7 0.000 Intergenic Intergenic 122151 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr8-437 chr8 24153450 24153694 + 22.7 0.000 Intergenic Intergenic -140468 NR_130709 10863 Hs.174030 NM_014265 ENSG00000042980 ADAM28 ADAM 28|MDC-L|MDCL|eMDC II|eMDCII ADAM metallopeptidase domain 28 protein-coding chr12-748 chr12 52976978 52977222 + 22.7 0.000 Intergenic Intergenic -27240 NM_001256293 3856 Hs.533782 NM_002273 ENSG00000170421 KRT8 CARD2|CK-8|CK8|CYK8|K2C8|K8|KO keratin 8 protein-coding chr2-591 chr2 20584464 20584708 + 22.7 0.000 Intergenic Intergenic 7962 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr6-477 chr6 366858 367102 + 22.7 0.000 Intergenic Intergenic -24772 NM_001195286 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding chr3-635 chr3 193872331 193872575 + 22.7 0.000 Intergenic Intergenic -28444 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr22-488 chr22 36378617 36378861 + 22.7 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 9328 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr11-1470 chr11 45666646 45666890 + 22.7 0.000 Intergenic Intergenic -1146 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr10-846 chr10 65931429 65931673 + 22.7 0.000 intron (NM_001127384, intron 17 of 17) intron (NM_001127384, intron 17 of 17) 360126 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA chr17-313 chr17 47205494 47205738 + 22.7 0.000 Intergenic Intergenic -3446 NM_001002841 4635 Hs.463300 NM_002476 ENSG00000198336 MYL4 ALC1|AMLC|GT1|PRO1957 myosin light chain 4 protein-coding chrX-359 chrX 13646160 13646404 + 22.7 0.000 Intergenic Intergenic -6859 NM_152634 170082 Hs.222855 NM_152634 ENSG00000176896 TCEANC - transcription elongation factor A N-terminal and central domain containing protein-coding chr7-917 chr7 18793063 18793307 + 22.7 0.000 intron (NM_058176, intron 15 of 22) intron (NM_058176, intron 15 of 22) 283915 NM_001204147 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr9-1377 chr9 133862824 133863068 + 22.7 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) -122991 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr2-879 chr2 229980870 229981114 + 22.7 0.000 intron (NM_174899, intron 2 of 3) intron (NM_174899, intron 2 of 3) -57812 NM_001348335 9320 Hs.572642 NM_004238 ENSG00000153827 TRIP12 MRD49|TRIP-12|ULF thyroid hormone receptor interactor 12 protein-coding chr2-572 chr2 219160665 219160909 + 22.7 0.000 promoter-TSS (NM_024782) promoter-TSS (NM_024782) 78 NM_024782 79840 Hs.225988 NM_024782 ENSG00000187736 NHEJ1 XLF non-homologous end joining factor 1 protein-coding chr9-552 chr9 132409972 132410216 + 22.7 0.000 promoter-TSS (NM_001282957) promoter-TSS (NM_001282957) -117 NM_207417 389799 Hs.201709 NM_207417 ENSG00000188523 CFAP77 C9orf171 cilia and flagella associated protein 77 protein-coding chr6-746 chr6 150056369 150056613 + 22.7 0.000 Intergenic L2b|LINE|L2 12630 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr4-1055 chr4 120035172 120035416 + 22.7 0.000 Intergenic MIRb|SINE|MIR 31554 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding chr11-897 chr11 62892881 62893125 + 22.7 0.000 Intergenic L2b|LINE|L2 11304 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr14-330 chr14 74940134 74940378 + 22.7 0.000 Intergenic Intergenic 15508 NM_002632 5228 Hs.252820 NM_002632 ENSG00000119630 PGF D12S1900|PGFL|PIGF|PLGF|PlGF-2|SHGC-10760 placental growth factor protein-coding chr5-1177 chr5 172898009 172898253 + 22.7 0.000 intron (NM_001031711, intron 3 of 9) intron (NM_001031711, intron 3 of 9) -16952 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr18-210 chr18 70384365 70384609 + 22.7 0.000 non-coding (NR_110764, exon 1 of 3) non-coding (NR_110764, exon 1 of 3) 104 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA chr17-1245 chr17 13429200 13429444 + 22.7 0.000 Intergenic Intergenic 114324 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA chr12-634 chr12 42483201 42483445 + 22.7 0.000 intron (NM_153026, intron 1 of 7) CpG 292 NM_001144881 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr3-707 chr3 36943974 36944218 + 22.7 0.000 intron (NM_001329998, intron 1 of 23) CpG 958 NM_001329998 9881 Hs.170999 NM_014831 ENSG00000168016 TRANK1 LBA1 tetratricopeptide repeat and ankyrin repeat containing 1 protein-coding chr1-649 chr1 95234101 95234345 + 22.7 0.000 promoter-TSS (NM_001128142) promoter-TSS (NM_001128142) 13 NM_015485 25950 Hs.483512 NM_015485 ENSG00000122481 RWDD3 RSUME RWD domain containing 3 protein-coding chr2-1112 chr2 110666988 110667232 + 22.7 0.000 intron (NM_001278616, intron 7 of 23) intron (NM_001278616, intron 7 of 23) -8861 NR_132975 106635550 NR_132975 SNORD132 - small nucleolar RNA, C/D box 132 snoRNA chr5-864 chr5 10077985 10078229 + 22.7 0.000 Intergenic Intergenic 171781 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr1-1793 chr1 90403221 90403465 + 22.7 0.000 Intergenic Zaphod|DNA|hAT-Tip100 -254407 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA chr16-291 chr16 714852 715096 + 22.7 0.000 promoter-TSS (NM_024042) promoter-TSS (NM_024042) -144 NM_024042 79006 Hs.533772 NM_024042 ENSG00000103260 METRN C16orf23|c380A1.2 meteorin, glial cell differentiation regulator protein-coding chr11-971 chr11 3086234 3086478 + 22.7 0.000 TTS (NM_145638) TTS (NM_145638) -28933 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr1-1031 chr1 52703108 52703352 + 22.7 0.000 Intergenic Intergenic -4883 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr3-548 chr3 188052283 188052527 + 22.7 0.000 Intergenic Intergenic -75998 NR_135538 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr9-320 chr9 135790790 135791034 + 22.7 0.000 intron (NM_001272003, intron 29 of 30) intron (NM_001272003, intron 29 of 30) 88727 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr7-796 chr7 151039196 151039440 + 22.7 0.000 intron (NM_001282292, intron 9 of 15) intron (NM_001282292, intron 9 of 15) -8974 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr1-1265 chr1 9267109 9267353 + 22.7 0.000 3' UTR (NM_004285, exon 5 of 5) 3' UTR (NM_004285, exon 5 of 5) -25663 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr2-1067 chr2 11749714 11749958 + 22.7 0.000 intron (NM_001349205, intron 1 of 21) intron (NM_001349205, intron 1 of 21) 1303 NM_001349205 23175 Hs.467740 NM_145693 ENSG00000134324 LPIN1 PAP1 lipin 1 protein-coding chr18-196 chr18 10520185 10520429 + 22.7 0.000 Intergenic Intergenic -5720 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr6-1100 chr6 153568865 153569109 + 22.7 0.000 Intergenic L1MEd|LINE|L1 -437705 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr2-1625 chr2 21044395 21044639 + 22.7 0.000 promoter-TSS (NM_000384) promoter-TSS (NM_000384) -444 NM_000384 338 Hs.120759 NM_000384 ENSG00000084674 APOB FLDB|LDLCQ4|apoB-100|apoB-48 apolipoprotein B protein-coding chr6-304 chr6 34888049 34888293 + 22.7 0.000 promoter-TSS (NM_005643) promoter-TSS (NM_005643) -100 NM_001270488 6882 Hs.112444 NM_005643 ENSG00000064995 TAF11 MGC:15243|PRO2134|TAF2I|TAFII28 TATA-box binding protein associated factor 11 protein-coding chr11-593 chr11 895140 895384 + 22.7 0.000 intron (NM_023947, intron 7 of 12) intron (NM_023947, intron 7 of 12) 15548 NM_023947 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr3-996 chr3 114686729 114686973 + 22.5 0.000 intron (NM_001348803, intron 6 of 13) intron (NM_001348803, intron 6 of 13) 56674 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA chr11-595 chr11 2158966 2159210 + 22.5 0.000 TTS (NM_001185098) TTS (NM_001185098) 2121 NR_003512 723961 Hs.272259 NM_001042376 ENSG00000129965 INS-IGF2 INSIGF INS-IGF2 readthrough protein-coding chr10-212 chr10 30433928 30434172 + 22.5 0.000 promoter-TSS (NM_001320961) promoter-TSS (NM_001320961) 29 NM_001244134 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding chr1-1097 chr1 203644928 203645172 + 22.5 0.000 intron (NM_001365784, intron 1 of 20) intron (NM_001365784, intron 1 of 20) 17113 NM_001365784 493 Hs.343522 NM_001684 ENSG00000058668 ATP2B4 ATP2B2|MXRA1|PMCA4|PMCA4b|PMCA4x ATPase plasma membrane Ca2+ transporting 4 protein-coding chr16-776 chr16 1331145 1331389 + 22.5 0.000 Intergenic Intergenic -2378 NM_001199098 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr10-747 chr10 95907342 95907586 + 22.5 0.000 promoter-TSS (NM_001130446) promoter-TSS (NM_001130446) -501 NM_001130446 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding chr14-574 chr14 90795734 90795978 + 22.5 0.000 intron (NM_001320421, intron 1 of 20) MIR|SINE|MIR 20561 NM_001320421 145567 Hs.655697 NM_001010854 ENSG00000165914 TTC7B TTC7L1|c14_5685 tetratricopeptide repeat domain 7B protein-coding chr19-1363 chr19 35375832 35376076 + 22.5 0.000 Intergenic Intergenic 4859 NM_001348195 2866 NM_005305 ENSG00000126251 GPR42 FFAR1L|FFAR3L|GPR41L|GPR42P G protein-coupled receptor 42 (gene/pseudogene) protein-coding chr20-210 chr20 44210606 44210850 + 22.5 0.000 promoter-TSS (NR_038339) promoter-TSS (NR_038339) 43 NM_016470 51526 Hs.75798 NM_016470 ENSG00000132823 OSER1 C20orf111|HSPC207|Osr1|Perit1|dJ1183I21.1 oxidative stress responsive serine rich 1 protein-coding chr7-1129 chr7 93307437 93307681 + 22.5 0.000 intron (NM_001257998, intron 19 of 28) Tigger17c|DNA|TcMar-Tigger 75193 NM_017667 55610 Hs.202424 NM_017667 ENSG00000004766 VPS50 CCDC132|VPS54L VPS50 subunit of EARP/GARPII complex protein-coding chr20-679 chr20 63966899 63967143 + 22.5 0.000 intron (NM_020713, intron 3 of 16) intron (NM_020713, intron 3 of 16) 2909 NM_020713 57473 Hs.740578 NM_020713 ENSG00000196700 ZNF512B GM632 zinc finger protein 512B protein-coding chr14-753 chr14 77760367 77760611 + 22.5 0.000 promoter-TSS (NR_161323) promoter-TSS (NR_161323) -279 NR_161323 283579 Hs.375834 NM_174943 ENSG00000197734 C14orf178 - chromosome 14 open reading frame 178 ncRNA chr18-139 chr18 41075187 41075431 + 22.5 0.000 Intergenic MamGypLTR3|LTR|Gypsy 445368 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr12-499 chr12 1618539 1618783 + 22.5 0.000 intron (NM_030775, intron 1 of 4) intron (NM_030775, intron 1 of 4) 1605 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr2-664 chr2 240821010 240821254 + 22.5 0.000 promoter-TSS (NM_001244008) promoter-TSS (NM_001244008) -824 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr10-1076 chr10 1021619 1021863 + 22.5 0.000 promoter-TSS (NR_024628) promoter-TSS (NR_024628) -896 NR_027709 55853 Hs.728538 NM_018470 ENSG00000232656 IDI2-AS1 C10orf110|HT009|IDI2-AS IDI2 antisense RNA 1 ncRNA chr5-807 chr5 142655719 142655963 + 22.5 0.000 intron (NM_001144935, intron 1 of 3) intron (NM_001144935, intron 1 of 3) -11540 NM_001257210 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr12-123 chr12 123712081 123712325 + 22.5 0.000 promoter-TSS (NM_012463) promoter-TSS (NM_012463) -150 NM_012463 23545 Hs.25786 NM_012463 ENSG00000185344 ATP6V0A2 A2|ARCL|ARCL2A|ATP6A2|ATP6N1D|J6B7|RTF|STV1|TJ6|TJ6M|TJ6S|VPH1|WSS ATPase H+ transporting V0 subunit a2 protein-coding chr16-584 chr16 66927024 66927268 + 22.5 0.000 Intergenic Intergenic -1610 NM_001128850 6236 Hs.1027 NM_004165 ENSG00000166592 RRAD RAD|RAD1|REM3 RRAD, Ras related glycolysis inhibitor and calcium channel regulator protein-coding GL000225.1-42 GL000225.1 45508 45752 + 22.5 0.000 NA NA NA NA chr4-565 chr4 177118636 177118880 + 22.5 0.000 Intergenic L4_C_Mam|LINE|RTE-X -191116 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr7-666 chr7 155585328 155585572 + 22.5 0.000 Intergenic Intergenic -14704 NM_001369813 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr11-1436 chr11 27390900 27391144 + 22.5 0.000 intron (NM_018490, intron 4 of 17) intron (NM_018490, intron 4 of 17) -27774 NM_080654 91057 Hs.143733 NM_030771 ENSG00000109881 CCDC34 L15|NY-REN-41|RAMA3 coiled-coil domain containing 34 protein-coding chr12-194 chr12 51238636 51238880 + 22.5 0.000 promoter-TSS (NM_014764) promoter-TSS (NM_014764) 34 NM_001136269 9802 Hs.369761 NM_014764 ENSG00000183283 DAZAP2 PRTB DAZ associated protein 2 protein-coding chr1-1835 chr1 151198445 151198689 + 22.5 0.000 promoter-TSS (NM_003557) promoter-TSS (NM_003557) 15 NM_001135638 8394 Hs.655131 NM_003557 ENSG00000143398 PIP5K1A - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha protein-coding chr1-828 chr1 39026808 39027052 + 22.5 0.000 intron (NM_004552, intron 1 of 2) intron (NM_004552, intron 1 of 2) 580 NM_004552 4725 Hs.632385 NM_004552 ENSG00000168653 NDUFS5 CI-15k|CI15K NADH:ubiquinone oxidoreductase subunit S5 protein-coding chr7-362 chr7 149285152 149285396 + 22.5 0.000 promoter-TSS (NR_036573) promoter-TSS (NR_036573) -7 NR_036573 155060 Hs.490512 NR_015357 ENSG00000244560 LOC155060 - AI894139 pseudogene pseudo chr6-224 chr6 34056449 34056693 + 22.5 0.000 exon (NM_001256812, exon 5 of 10) exon (NM_001256812, exon 5 of 10) 49396 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr4-657 chr4 3286071 3286315 + 22.5 0.000 Intergenic Intergenic -27954 NM_198229 6002 Hs.527061 NM_002926 ENSG00000159788 RGS12 - regulator of G protein signaling 12 protein-coding chr12-1122 chr12 54019946 54020190 + 22.5 0.000 intron (NM_014620, intron 1 of 3) intron (NM_014620, intron 1 of 3) 3180 NM_153693 3223 Hs.549040 NM_004503 ENSG00000197757 HOXC6 CP25|HHO.C8|HOX3|HOX3C homeobox C6 protein-coding chr19-1126 chr19 55477093 55477337 + 22.5 0.000 intron (NM_033113, intron 1 of 2) intron (NM_033113, intron 1 of 2) 598 NM_033113 89887 Hs.525209 NM_033113 ENSG00000197483 ZNF628 ZEC|Zfp628 zinc finger protein 628 protein-coding chr8-706 chr8 142815873 142816117 + 22.5 0.000 Intergenic Intergenic -18806 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding chr5-210 chr5 108381430 108381674 + 22.5 0.000 exon (NM_001163315, exon 1 of 9) exon (NM_001163315, exon 1 of 9) 546 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr15-308 chr15 89654952 89655196 + 22.5 0.000 intron (NM_198525, intron 1 of 18) CpG 393 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chrX-125 chrX 70979415 70979659 + 22.5 0.000 Intergenic MER20|DNA|hAT-Charlie -48441 NM_032803 84889 Hs.175220 NM_032803 ENSG00000165349 SLC7A3 ATRC3|CAT-3|CAT3 solute carrier family 7 member 3 protein-coding chr9-1029 chr9 136607100 136607344 + 22.5 0.000 Intergenic Intergenic 9959 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr3-1355 chr3 99232731 99232975 + 22.5 0.000 Intergenic Intergenic -331158 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr7-953 chr7 50302396 50302640 + 22.5 0.000 Intergenic MIRb|SINE|MIR -1546 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chr17-817 chr17 80544789 80545033 + 22.5 0.000 promoter-TSS (NM_001163034) promoter-TSS (NM_001163034) 73 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr8-850 chr8 37938794 37939038 + 22.5 0.000 intron (NM_152413, intron 1 of 8) intron (NM_152413, intron 1 of 8) 1208 NM_152413 137362 Hs.380740 NM_152413 ENSG00000169154 GOT1L1 - glutamic-oxaloacetic transaminase 1 like 1 protein-coding chr2-962 chr2 95434589 95434833 + 22.5 0.000 Intergenic Intergenic 32003 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding chr10-1129 chr10 32377561 32377805 + 22.5 0.000 intron (NM_001282391, intron 1 of 13) intron (NM_001282391, intron 1 of 13) 1086 NM_001282391 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr6-843 chr6 113744680 113744924 + 22.5 0.000 Intergenic Intergenic -94727 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA chr1-67 chr1 212234612 212234856 + 22.5 0.000 promoter-TSS (NR_125982) promoter-TSS (NR_125982) 2 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr22-695 chr22 39310170 39310414 + 22.5 0.000 Intergenic AluJb|SINE|Alu 3619 NR_000028 116938 NR_000028 ENSG00000209480 SNORD83B RNU83B|U83B small nucleolar RNA, C/D box 83B snoRNA chr19-964 chr19 17475629 17475873 + 22.5 0.000 intron (NM_198580, intron 1 of 11) intron (NM_198580, intron 1 of 11) 5227 NM_198580 376497 Hs.363138 NM_198580 ENSG00000130304 SLC27A1 ACSVL5|FATP|FATP-1|FATP1 solute carrier family 27 member 1 protein-coding chr12-1187 chr12 98114662 98114906 + 22.5 0.000 Intergenic Intergenic -119336 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA chr5-838 chr5 172133356 172133600 + 22.5 0.000 intron (NM_005990, intron 2 of 18) MamRTE1|LINE|RTE-BovB 54746 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chr6-738 chr6 142568908 142569152 + 22.5 0.000 intron (NR_027312, intron 1 of 2) intron (NR_027312, intron 1 of 2) 68806 NR_027311 153910 Hs.350819 NR_027311 ENSG00000236366 LOC153910 - uncharacterized LOC153910 ncRNA chr6-988 chr6 45896779 45897023 + 22.5 0.000 Intergenic Intergenic 40696 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding chr11-759 chr11 91982094 91982338 + 22.5 0.000 Intergenic Intergenic -242818 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding chr14-328 chr14 73790291 73790535 + 22.5 0.000 intron (NR_109995, intron 2 of 2) intron (NR_109995, intron 2 of 2) 3053 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA chr10-832 chr10 49484666 49484910 + 22.5 0.000 intron (NM_001346440, intron 8 of 20) L1M6|LINE|L1 39493 NM_170753 267004 Hs.49063 NM_170753 ENSG00000225830 PGBD3 - piggyBac transposable element derived 3 protein-coding chr9-600 chr9 91164849 91165093 + 22.5 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 45909 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr16-730 chr16 64356297 64356541 + 22.5 0.000 Intergenic Intergenic 765644 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr16-301 chr16 11851415 11851659 + 22.5 0.000 promoter-TSS (NM_015659) promoter-TSS (NM_015659) 5 NM_015659 26156 Hs.401842 NM_015659 ENSG00000171490 RSL1D1 CSIG|L12|PBK1|UTP30 ribosomal L1 domain containing 1 protein-coding chr3-571 chr3 43866589 43866833 + 22.5 0.000 Intergenic MamTip3|DNA|hAT-Tip100 -175117 NM_001346469 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr20-513 chr20 63951001 63951245 + 22.5 0.000 promoter-TSS (NM_001353478) promoter-TSS (NM_001353478) 64 NM_001193379 54963 Hs.504998 NM_017859 ENSG00000198276 UCKL1 UCK1L|URKL1 uridine-cytidine kinase 1 like 1 protein-coding chr16-1068 chr16 11100621 11100865 + 22.5 0.000 intron (NM_015226, intron 18 of 22) intron (NM_015226, intron 18 of 22) 155439 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr2-786 chr2 171894089 171894333 + 22.5 0.000 promoter-TSS (NM_003705) promoter-TSS (NM_003705) 33 NM_003705 8604 Hs.470608 NM_003705 ENSG00000115840 SLC25A12 AGC1|ARALAR|EIEE39 solute carrier family 25 member 12 protein-coding chr11-1149 chr11 66622893 66623137 + 22.5 0.000 intron (NM_001198846, intron 1 of 1) intron (NM_001198846, intron 1 of 1) 6385 NM_001198837 10432 Hs.533712 NM_006328 ENSG00000239306 RBM14 COAA|PSP2|SIP|SYTIP1|TMEM137 RNA binding motif protein 14 protein-coding chr8-584 chr8 132877469 132877713 + 22.5 0.000 intron (NM_003235, intron 5 of 47) intron (NM_003235, intron 5 of 47) 10633 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr8-705 chr8 142749354 142749598 + 22.5 0.000 TTS (NM_205545) TTS (NM_205545) 3056 NM_205545 137797 Hs.441280 NM_205545 ENSG00000197353 LYPD2 LYPDC2|UNQ430 LY6/PLAUR domain containing 2 protein-coding chr16-860 chr16 79698370 79698614 + 22.5 0.000 Intergenic Intergenic -71979 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr20-282 chr20 59835879 59836123 + 22.5 0.000 intron (NM_080672, intron 8 of 12) intron (NM_080672, intron 8 of 12) 97636 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding chr20-271 chr20 41293330 41293574 + 22.5 0.000 intron (NM_015035, intron 1 of 3) L3|LINE|CR1 6668 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding chr2-586 chr2 9565498 9565742 + 22.5 0.000 Intergenic Intergenic -9790 NM_003183 6868 Hs.404914 NM_003183 ENSG00000151694 ADAM17 ADAM18|CD156B|CSVP|NISBD|NISBD1|TACE ADAM metallopeptidase domain 17 protein-coding chr14-649 chr14 75430334 75430578 + 22.5 0.000 intron (NM_130469, intron 1 of 3) intron (NM_130469, intron 1 of 3) -1678 NM_001135049 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding chr16-536 chr16 67723339 67723583 + 22.5 0.000 3' UTR (NM_001320239, exon 13 of 13) 3' UTR (NM_001320239, exon 13 of 13) -4145 NR_027398 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr5-376 chr5 73565496 73565740 + 22.5 0.000 promoter-TSS (NM_032175) promoter-TSS (NM_032175) 21 NM_023039 57763 Hs.239154 NM_023039 ENSG00000164331 ANKRA2 ANKRA ankyrin repeat family A member 2 protein-coding chr3-379 chr3 179604650 179604894 + 22.5 0.000 promoter-TSS (NM_002492) promoter-TSS (NM_002492) -15 NM_001199958 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding chr22-191 chr22 20807560 20807804 + 22.5 0.000 intron (NM_001362863, intron 8 of 53) intron (NM_001362863, intron 8 of 53) 33569 NM_000185 3053 Hs.474270 NM_000185 ENSG00000099937 SERPIND1 D22S673|HC2|HCF2|HCII|HLS2|LS2|THPH10 serpin family D member 1 protein-coding chr10-662 chr10 92517125 92517369 + 22.5 0.000 intron (NR_136399, intron 4 of 25) intron (NR_136399, intron 4 of 25) -19486 NM_001165946 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding chr11-1014 chr11 73325097 73325341 + 22.5 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -15858 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr14-507 chr14 23034721 23034965 + 22.5 0.000 promoter-TSS (NM_002797) promoter-TSS (NM_002797) 57 NM_002797 5693 Hs.422990 NM_002797 ENSG00000100804 PSMB5 LMPX|MB1|X proteasome subunit beta 5 protein-coding chr5-661 chr5 57889637 57889881 + 22.5 0.000 TTS (NR_109900) TTS (NR_109900) 9403 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA chr11-892 chr11 61160610 61160854 + 22.4 0.000 intron (NM_017966, intron 1 of 4) intron (NM_017966, intron 1 of 4) 694 NM_017966 55048 Hs.523715 NM_017966 ENSG00000167987 VPS37C - VPS37C subunit of ESCRT-I protein-coding chr16-806 chr16 25155918 25156162 + 22.4 0.000 intron (NM_016309, intron 5 of 10) L2a|LINE|L2 -7008 NR_039998 100506655 Hs.657576 NR_039998 ENSG00000260034 LCMT1-AS2 - LCMT1 antisense RNA 2 ncRNA chr9-1364 chr9 131021581 131021825 + 22.4 0.000 intron (NM_006059, intron 1 of 27) MER21A|LTR|ERVL 12529 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr10-1169 chr10 67282890 67283134 + 22.4 0.000 intron (NM_001127384, intron 5 of 17) MER39B|LTR|ERV1 120398 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA chr7-485 chr7 129295201 129295445 + 22.4 0.000 intron (NM_001130720, intron 1 of 16) intron (NM_001130720, intron 1 of 16) 70293 NM_015328 23382 Hs.600789 NM_015328 ENSG00000158467 AHCYL2 ADOHCYASE3|IRBIT2 adenosylhomocysteinase like 2 protein-coding chr5-517 chr5 178642259 178642503 + 22.4 0.000 Intergenic HERV16-int|LTR|ERVL -15331 NM_020666 57396 Hs.406557 NM_020666 ENSG00000113240 CLK4 - CDC like kinase 4 protein-coding chr6-1129 chr6 168054738 168054982 + 22.4 0.000 TTS (NR_110312) TTS (NR_110312) 20975 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr11-450 chr11 6604423 6604667 + 22.4 0.000 promoter-TSS (NM_015324) promoter-TSS (NM_015324) 771 NM_001014795 3611 Hs.706355 NM_004517 ENSG00000166333 ILK HEL-S-28|ILK-1|ILK-2|P59|p59ILK integrin linked kinase protein-coding chr9-957 chr9 123594664 123594908 + 22.4 0.000 intron (NM_001352968, intron 10 of 18) intron (NM_001352968, intron 10 of 18) -109164 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA chr1-1563 chr1 164794475 164794719 + 22.4 0.000 intron (NM_001204963, intron 3 of 8) intron (NM_001204963, intron 3 of 8) -19956 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr12-910 chr12 123365706 123365950 + 22.4 0.000 promoter-TSS (NR_107039) promoter-TSS (NR_107039) 880 NR_157805 112268105 Hs.7012 NR_157805 SBNO1-AS1 - SBNO1 antisense RNA 1 ncRNA chr17-528 chr17 81717466 81717710 + 22.4 0.000 intron (NM_012140, intron 8 of 10) intron (NM_012140, intron 8 of 10) 5304 NM_001270888 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr11-489 chr11 2378013 2378257 + 22.4 0.000 promoter-TSS (NR_108080) promoter-TSS (NR_108080) -143 NR_108080 101927682 Hs.675920 NR_108080 ENSG00000238184 CD81-AS1 - CD81 antisense RNA 1 ncRNA chr8-809 chr8 18387195 18387439 + 22.4 0.000 Intergenic CpG -3965 NM_000015 10 Hs.2 NM_000015 ENSG00000156006 NAT2 AAC2|NAT-2|PNAT N-acetyltransferase 2 protein-coding chr10-546 chr10 110168619 110168863 + 22.4 0.000 Intergenic Intergenic -38864 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr13-168 chr13 27195197 27195441 + 22.4 0.000 Intergenic L3b|LINE|CR1 23060 NR_046548 100874071 Hs.735400 NR_046548 USP12-AS2 - USP12 antisense RNA 2 (head to head) ncRNA chr15-65 chr15 63042438 63042682 + 22.4 0.000 promoter-TSS (NM_001018007) promoter-TSS (NM_001018007) -187 NM_001018007 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr10-463 chr10 32347054 32347298 + 22.4 0.000 promoter-TSS (NR_104159) promoter-TSS (NR_104159) -18 NM_001272019 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding chr1-2643 chr1 219639912 219640156 + 22.4 0.000 Intergenic Intergenic -26889 NM_001355457 643136 Hs.647764 NM_001085394 ENSG00000215817 ZC3H11B ZC3HDC11B zinc finger CCCH-type containing 11B protein-coding chr5-610 chr5 138601434 138601678 + 22.4 0.000 Intergenic Intergenic -26155 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr19-967 chr19 18785519 18785763 + 22.4 0.000 intron (NM_000095, intron 14 of 18) intron (NM_000095, intron 14 of 18) 5664 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr20-133 chr20 63627155 63627399 + 22.4 0.000 promoter-TSS (NM_012384) promoter-TSS (NM_012384) 42 NR_132418 100505771 Hs.448392 NR_132417 ENSG00000232442 MHENCR - melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 ncRNA chr10-561 chr10 132419990 132420234 + 22.4 0.000 Intergenic Intergenic 22912 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr3-1029 chr3 143147022 143147266 + 22.4 0.000 Intergenic Intergenic 27373 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr10-239 chr10 23438806 23439050 + 22.4 0.000 promoter-TSS (NM_001145373) promoter-TSS (NM_001145373) -341 NM_001145373 220213 Hs.499042 NM_001145373 ENSG00000165312 OTUD1 DUBA7|OTDC1 OTU deubiquitinase 1 protein-coding chr18-86 chr18 79791626 79791870 + 22.4 0.000 Intergenic Intergenic -71920 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding chr5-500 chr5 154288092 154288336 + 22.4 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) -58892 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr16-417 chr16 2964791 2965035 + 22.4 0.000 exon (NM_172229, exon 2 of 9) exon (NM_172229, exon 2 of 9) 638 NM_172229 79412 Hs.661128 NM_024507 ENSG00000131650 KREMEN2 KRM2 kringle containing transmembrane protein 2 protein-coding chr2-353 chr2 217996013 217996257 + 22.4 0.000 Intergenic Intergenic 17428 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr9-221 chr9 34652023 34652267 + 22.4 0.000 promoter-TSS (NM_001142784) promoter-TSS (NM_001142784) -40 NM_001142784 3590 Hs.591088 NM_004512 ENSG00000137070 IL11RA CRSDA interleukin 11 receptor subunit alpha protein-coding chr4-149 chr4 165378877 165379121 + 22.4 0.000 promoter-TSS (NM_001873) promoter-TSS (NM_001873) -9 NM_001873 1363 Hs.75360 NM_001873 ENSG00000109472 CPE CPH carboxypeptidase E protein-coding chr2-799 chr2 218343657 218343901 + 22.4 0.000 intron (NM_022572, intron 7 of 8) intron (NM_022572, intron 7 of 8) 1868 NR_106868 102466197 NR_106868 ENSG00000278524 MIR6810 hsa-mir-6810 microRNA 6810 ncRNA chr6-804 chr6 43585310 43585554 + 22.4 0.000 intron (NM_001291969, intron 2 of 8) MER21B|LTR|ERVL 9247 NM_001291969 5429 Hs.655467 NM_006502 ENSG00000170734 POLH RAD30|RAD30A|XP-V|XPV DNA polymerase eta protein-coding chr5-336 chr5 344091 344335 + 22.4 0.000 intron (NM_020731, intron 2 of 11) CpG-21781 40037 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr18-66 chr18 42196691 42196935 + 22.4 0.000 intron (NR_046174, intron 1 of 9) intron (NR_046174, intron 1 of 9) 10145 NR_046457 284260 Hs.652819 NR_046174 ENSG00000267586 LINC00907 - long intergenic non-protein coding RNA 907 ncRNA chr5-847 chr5 176544037 176544281 + 22.4 0.000 intron (NM_001171976, intron 1 of 31) intron (NM_001171976, intron 1 of 31) 1648 NM_001171976 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr3-1033 chr3 148955768 148956012 + 22.4 0.000 Intergenic Intergenic -35518 NM_001184721 2992 Hs.477892 NM_004130 ENSG00000163754 GYG1 GSD15|GYG glycogenin 1 protein-coding chr2-885 chr2 240460143 240460387 + 22.4 0.000 intron (NM_002081, intron 2 of 8) intron (NM_002081, intron 2 of 8) -3565 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr13-354 chr13 97434603 97434847 + 22.4 0.000 exon (NM_021033, exon 1 of 2) exon (NM_021033, exon 1 of 2) 556 NM_021033 5911 Hs.508480 NM_021033 ENSG00000125249 RAP2A K-REV|KREV|RAP2|RbBP-30 RAP2A, member of RAS oncogene family protein-coding chr7-554 chr7 17690079 17690323 + 22.4 0.000 Intergenic Intergenic -131292 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA chr4-1071 chr4 139528699 139528943 + 22.4 0.000 intron (NM_001306199, intron 4 of 7) intron (NM_001306199, intron 4 of 7) 27948 NM_030648 80854 Hs.480792 NM_030648 ENSG00000145391 SETD7 KMT7|SET7|SET7/9|SET9 SET domain containing 7, histone lysine methyltransferase protein-coding chr6-689 chr6 54060248 54060492 + 22.4 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) -12776 NR_046710 100873951 NR_046710 MLIP-AS1 - MLIP antisense RNA 1 ncRNA chr10-553 chr10 118423950 118424194 + 22.4 0.000 Intergenic Intergenic 66964 NR_108045 100506126 Hs.69494 NR_108045 ENSG00000232139 LINC00867 - long intergenic non-protein coding RNA 867 ncRNA chr13-99 chr13 24511539 24511783 + 22.4 0.000 intron (NM_006437, intron 1 of 33) intron (NM_006437, intron 1 of 33) 1117 NM_006437 143 Hs.744855 NM_006437 ENSG00000102699 PARP4 ADPRTL1|ARTD4|PARP-4|PARPL|PH5P|VAULT3|VPARP|VWA5C|p193 poly(ADP-ribose) polymerase family member 4 protein-coding chr10-721 chr10 15167879 15168123 + 22.4 0.000 intron (NM_001308295, intron 1 of 12) CpG 692 NM_004808 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr9-476 chr9 76298483 76298727 + 22.4 0.000 intron (NM_001190482, intron 27 of 36) intron (NM_001190482, intron 27 of 36) 95821 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding chr20-490 chr20 37358556 37358800 + 22.4 0.000 intron (NM_198291, intron 1 of 13) intron (NM_198291, intron 1 of 13) 12550 NM_198291 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr11-472 chr11 66295327 66295571 + 22.4 0.000 exon (NM_153266, exon 2 of 2) exon (NM_153266, exon 2 of 2) 3555 NM_153266 256472 Hs.399779 NM_153266 ENSG00000179292 TMEM151A TMEM151 transmembrane protein 151A protein-coding chr2-1669 chr2 37637660 37637904 + 22.4 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 34417 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr17-1439 chr17 80725865 80726109 + 22.4 0.000 intron (NM_020761, intron 4 of 33) MER20|DNA|hAT-Charlie 79645 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA chr16-130 chr16 89926013 89926257 + 22.4 0.000 intron (NM_006086, intron 1 of 3) CpG 2793 NM_006086 10381 Hs.511743 NM_006086 ENSG00000258947 TUBB3 CDCBM|CDCBM1|CFEOM3|CFEOM3A|FEOM3|TUBB4|beta-4 tubulin beta 3 class III protein-coding chr6-698 chr6 85449533 85449777 + 22.4 0.000 promoter-TSS (NM_001204813) promoter-TSS (NM_001204813) 71 NM_001204813 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr1-1422 chr1 184663950 184664194 + 22.4 0.000 Intergenic Intergenic 90786 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr5-687 chr5 140190609 140190853 + 22.4 0.000 intron (NM_032412, intron 1 of 2) intron (NM_032412, intron 1 of 2) 15543 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr2-580 chr2 1817412 1817656 + 22.4 0.000 intron (NM_015025, intron 21 of 24) intron (NM_015025, intron 21 of 24) -73019 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr15-36 chr15 66701256 66701500 + 22.4 0.000 promoter-TSS (NR_027654) promoter-TSS (NR_027654) -858 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr11-1310 chr11 64268677 64268921 + 22.4 0.000 3' UTR (NM_000932, exon 31 of 31) 3' UTR (NM_000932, exon 31 of 31) -15540 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr8-374 chr8 13193407 13193651 + 22.4 0.000 intron (NM_001348082, intron 5 of 16) intron (NM_001348082, intron 5 of 16) -60240 NM_006094 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr4-931 chr4 20373811 20374055 + 22.4 0.000 intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) -18256 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA chr10-1300 chr10 119761202 119761446 + 22.4 0.000 intron (NM_014937, intron 2 of 19) intron (NM_014937, intron 2 of 19) 35274 NM_014937 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr7-302 chr7 151232280 151232524 + 22.4 0.000 promoter-TSS (NM_001284295) promoter-TSS (NM_001284295) -81 NM_001284295 54480 Hs.647084 NM_019015 ENSG00000033100 CHPF2 CSGLCA-T|CSGlcAT|ChSy-3|chPF-2 chondroitin polymerizing factor 2 protein-coding chr7-950 chr7 47450257 47450501 + 22.4 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 14424 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr11-414 chr11 8832605 8832849 + 22.4 0.000 intron (NM_005418, intron 3 of 22) intron (NM_005418, intron 3 of 22) -21392 NM_139157 6764 Hs.117715 NM_005418 ENSG00000166444 ST5 DENND2B|HTS1|p126 suppression of tumorigenicity 5 protein-coding chr4-432 chr4 139815977 139816221 + 22.4 0.000 intron (NM_018717, intron 2 of 4) intron (NM_018717, intron 2 of 4) 150280 NM_001204368 4258 Hs.81874 NM_002413 ENSG00000085871 MGST2 GST2|MGST-II microsomal glutathione S-transferase 2 protein-coding chr20-372 chr20 37289653 37289897 + 22.4 0.000 intron (NM_001003897, intron 1 of 2) CpG 120 NM_001369742 63905 Hs.6126 NM_022077 ENSG00000101363 MANBAL - mannosidase beta like protein-coding chr17-1035 chr17 75034207 75034451 + 22.4 0.000 intron (NR_110835, intron 2 of 7) intron (NR_110835, intron 2 of 7) 1762 NR_110835 23510 Hs.514468 NM_015353 ENSG00000180901 KCTD2 - potassium channel tetramerization domain containing 2 protein-coding chr17-934 chr17 14144760 14145004 + 22.4 0.000 intron (NM_001303, intron 4 of 6) intron (NM_001303, intron 4 of 6) 75378 NM_001303 1352 Hs.462278 NM_001303 ENSG00000006695 COX10 - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 protein-coding chr9-1007 chr9 134381231 134381475 + 22.4 0.000 intron (NM_001291920, intron 1 of 9) intron (NM_001291920, intron 1 of 9) 1942 NR_039816 100616236 NR_039816 ENSG00000263897 MIR4669 - microRNA 4669 ncRNA chr9-618 chr9 130391960 130392204 + 22.4 0.000 exon (NM_001291815, exon 66 of 98) exon (NM_001291815, exon 66 of 98) -52625 NM_000050 445 Hs.160786 NM_000050 ENSG00000130707 ASS1 ASS|CTLN1 argininosuccinate synthase 1 protein-coding chr9-942 chr9 114364227 114364471 + 22.4 0.000 intron (NM_001317950, intron 7 of 21) MIR|SINE|MIR 23633 NM_001317950 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr4-1049 chr4 112884428 112884672 + 22.4 0.000 intron (NM_001354271, intron 1 of 42) MER58B|DNA|hAT-Charlie 23563 NM_001354264 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding chr1-2212 chr1 8077400 8077644 + 22.4 0.000 Intergenic Intergenic -51213 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr7-704 chr7 22103738 22103982 + 22.4 0.000 Intergenic Intergenic 89885 NM_001367601 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr11-293 chr11 36035002 36035246 + 22.4 0.000 intron (NM_001304264, intron 1 of 5) L2b|LINE|L2 25026 NR_039769 100616311 NR_039769 ENSG00000263389 MIR3973 - microRNA 3973 ncRNA chr9-1274 chr9 105243001 105243245 + 22.4 0.000 Intergenic Intergenic -1482 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding chr6-1038 chr6 105882288 105882532 + 22.4 0.000 Intergenic Intergenic -203926 NM_001198 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr15-705 chr15 78552824 78553068 + 22.4 0.000 TTS (NM_002789) TTS (NM_002789) 12260 NM_001330676 5685 Hs.251531 NM_002789 ENSG00000041357 PSMA4 HC9|HsT17706|PSC9 proteasome subunit alpha 4 protein-coding chr11-708 chr11 13118149 13118393 + 22.4 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 108955 NM_001080521 644943 Hs.134650 NM_001080521 ENSG00000189431 RASSF10 - Ras association domain family member 10 protein-coding chr1-959 chr1 171654247 171654491 + 22.4 0.000 Intergenic MIR3|SINE|MIR -1681 NM_000261 4653 Hs.436037 NM_000261 ENSG00000034971 MYOC GLC1A|GPOA|JOAG|JOAG1|TIGR myocilin protein-coding chr7-1209 chr7 4849542 4849786 + 22.4 0.000 intron (NM_018059, intron 2 of 14) Kanga1d|DNA|TcMar-Tc2 -12214 NR_145804 109623455 NR_145804 SNORD165 - small nucleolar RNA, C/D box 165 snoRNA chr6-1024 chr6 82509825 82510069 + 22.4 0.000 Intergenic Intergenic 145703 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding chr2-1008 chr2 182784804 182785048 + 22.4 0.000 non-coding (NR_073365, exon 24 of 24) non-coding (NR_073365, exon 24 of 24) 68669 NM_018981 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding chr11-884 chr11 46446522 46446766 + 22.4 0.000 intron (NM_001267782, intron 13 of 19) MER20|DNA|hAT-Charlie -5163 NR_036118 100422825 NR_036118 ENSG00000283497 MIR3160-2 mir-3160-2 microRNA 3160-2 ncRNA chr3-1429 chr3 141337336 141337580 + 22.4 0.000 intron (NM_001080412, intron 1 of 7) intron (NM_001080412, intron 1 of 7) 13272 NM_001080412 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr4-415 chr4 56289874 56290118 + 22.4 0.000 intron (NM_020722, intron 3 of 10) MIR3|SINE|MIR 97495 NM_001323890 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding chr2-782 chr2 169172097 169172341 + 22.4 0.000 intron (NM_004525, intron 57 of 78) intron (NM_004525, intron 57 of 78) 91112 NM_001142271 10170 Hs.179608 NM_005771 ENSG00000073737 DHRS9 3-alpha-HSD|3ALPHA-HSD|RDH-E2|RDH-TBE|RDH15|RDHL|RDHTBE|RETSDR8|SDR9C4 dehydrogenase/reductase 9 protein-coding chr9-830 chr9 134805682 134805926 + 22.4 0.000 intron (NM_001278074, intron 41 of 65) intron (NM_001278074, intron 41 of 65) 43565 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr10-280 chr10 132520405 132520649 + 22.4 0.000 non-coding (NR_158224, exon 2 of 4) non-coding (NR_158224, exon 2 of 4) 16396 NR_158224 107984282 Hs.142505 NR_158224 LOC107984282 - uncharacterized LOC107984282 ncRNA chr8-483 chr8 31820078 31820322 + 22.4 0.000 intron (NM_013962, intron 1 of 4) LTR40A1|LTR|ERVL 180448 NM_013962 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding chr8-395 chr8 55939943 55940187 + 22.4 0.000 intron (NM_002350, intron 1 of 12) intron (NM_002350, intron 1 of 12) -37210 NR_145767 109617001 NR_145767 ENSG00000199405 SNORA1B - small nucleolar RNA, H/ACA box 1B snoRNA chrX-533 chrX 120244370 120244614 + 22.4 0.000 intron (NR_027131, intron 1 of 2) intron (NR_027131, intron 1 of 2) 775 NR_027131 158801 Hs.442518 NM_173522 ENSG00000233382 NKAPP1 CXorf42 NFKB activating protein pseudogene 1 pseudo chr10-328 chr10 79069479 79069723 + 22.4 0.000 intron (NM_020338, intron 1 of 24) CpG-3064 635 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr16-665 chr16 80614990 80615234 + 22.4 0.000 intron (NM_152342, intron 4 of 6) intron (NM_152342, intron 4 of 6) -42304 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA chr16-518 chr16 30355393 30355637 + 22.4 0.000 promoter-TSS (NM_006110) promoter-TSS (NM_006110) -207 NM_006110 10421 Hs.202677 NM_006110 ENSG00000169217 CD2BP2 FWP010|LIN1|PPP1R59|Snu40|U5-52K CD2 cytoplasmic tail binding protein 2 protein-coding chr12-632 chr12 40569840 40570084 + 22.4 0.000 intron (NM_173600, intron 173 of 173) intron (NM_173600, intron 173 of 173) -122477 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr19-483 chr19 2316000 2316244 + 22.4 0.000 Intergenic Intergenic -7968 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr2-1801 chr2 115433294 115433538 + 22.4 0.000 intron (NM_001321912, intron 4 of 25) (TG)n|Simple_repeat|Simple_repeat 89601 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding chr19-1647 chr19 48660922 48661166 + 22.4 0.000 TTS (NM_145807) TTS (NM_145807) 12037 NM_145807 126147 Hs.326217 NM_145807 ENSG00000142233 NTN5 - netrin 5 protein-coding chr5-455 chr5 37722968 37723212 + 22.4 0.000 intron (NM_001345998, intron 15 of 17) intron (NM_001345998, intron 15 of 17) 111732 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding chr4-658 chr4 3470709 3470953 + 22.4 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 7525 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr15-182 chr15 68187629 68187873 + 22.4 0.000 exon (NM_001320687, exon 15 of 15) exon (NM_001320687, exon 15 of 15) 18359 NM_001286695 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr16-620 chr16 2206011 2206255 + 22.4 0.000 exon (NM_001199173, exon 2 of 9) exon (NM_001199173, exon 2 of 9) 679 NR_147906 64223 Hs.29203 NM_022372 ENSG00000167965 MLST8 GBL|GbetaL|LST8|POP3|WAT1 MTOR associated protein, LST8 homolog protein-coding chr1-1504 chr1 32236195 32236439 + 22.4 0.000 intron (NR_026850, intron 3 of 6) Tigger7|DNA|TcMar-Tigger 5393 NR_026850 339483 Hs.471067 NR_026850 MTMR9LP MTMR9L myotubularin related protein 9 like, pseudogene pseudo chr20-619 chr20 48638218 48638462 + 22.4 0.000 intron (NM_020820, intron 30 of 39) (CA)n|Simple_repeat|Simple_repeat 189659 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding chr6-549 chr6 122184628 122184872 + 22.4 0.000 Intergenic Intergenic -214801 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding chr14-291 chr14 38208902 38209146 + 22.4 0.000 intron (NM_001049, intron 2 of 2) intron (NM_001049, intron 2 of 2) 1120 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr20-351 chr20 62451274 62451518 + 22.4 0.000 Intergenic Intergenic -23857 NM_080833 140893 Hs.180374 NM_080833 ENSG00000130701 RBBP8NL C20orf151 RBBP8 N-terminal like protein-coding chr5-327 chr5 150497598 150497842 + 22.4 0.000 promoter-TSS (NM_001301063) promoter-TSS (NM_001301063) -59 NM_001301063 3340 Hs.222055 NM_001543 ENSG00000070614 NDST1 HSST|MRT46|NST1 N-deacetylase and N-sulfotransferase 1 protein-coding chr12-408 chr12 49060155 49060399 + 22.4 0.000 Intergenic CpG -4953 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr22-355 chr22 41669353 41669597 + 22.4 0.000 Intergenic MER74B|LTR|ERVL 19392 NM_001003796 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr5-1059 chr5 76996944 76997188 + 22.4 0.000 Intergenic Intergenic -33338 NM_018046 55109 Hs.634849 NM_018046 ENSG00000164252 AGGF1 GPATC7|GPATCH7|HSU84971|HUS84971|VG5Q angiogenic factor with G-patch and FHA domains 1 protein-coding chr5-705 chr5 170173282 170173526 + 22.4 0.000 Intergenic Intergenic 25737 NR_108022 100507267 Hs.634846 NR_108022 LINC01187 CTB-27N1.1|KIDR long intergenic non-protein coding RNA 1187 ncRNA chr5-1105 chr5 132426759 132427003 + 22.4 0.000 intron (NR_161242, intron 2 of 3) L2b|LINE|L2 15952 NR_161242 441108 Hs.658288 NM_001013717 C5orf56 - chromosome 5 open reading frame 56 ncRNA chr17-910 chr17 954713 954957 + 22.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 24941 NM_022463 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr19-1454 chr19 3672074 3672318 + 22.4 0.000 intron (NM_001195733, intron 1 of 16) intron (NM_001195733, intron 1 of 16) 28272 NM_001195733 23396 Hs.282177 NM_012398 ENSG00000186111 PIP5K1C LCCS3|PIP5K-GAMMA|PIP5K1-gamma|PIP5Kgamma phosphatidylinositol-4-phosphate 5-kinase type 1 gamma protein-coding chr3-553 chr3 9715921 9716165 + 22.2 0.000 intron (NM_001308388, intron 13 of 19) intron (NM_001308388, intron 13 of 19) 12210 NM_001308388 151835 Hs.121335 NM_153635 ENSG00000144550 CPNE9 - copine family member 9 protein-coding chr19-174 chr19 46661022 46661266 + 22.2 0.000 promoter-TSS (NR_040041) promoter-TSS (NR_040041) 38 NM_145056 147906 Hs.515490 NM_145056 ENSG00000197380 DACT3 DAPPER3|RRR1 dishevelled binding antagonist of beta catenin 3 protein-coding chr12-507 chr12 6965142 6965386 + 22.2 0.000 TTS (NM_001267700) TTS (NM_001267700) 1167 NR_029682 406933 NR_029682 ENSG00000207708 MIR141 MIRN141|mir-141 microRNA 141 ncRNA chr11-475 chr11 75562074 75562318 + 22.2 0.000 promoter-TSS (NM_001235) promoter-TSS (NM_001235) -57 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr6-1056 chr6 120120097 120120341 + 22.2 0.000 Intergenic MLT2A2|LTR|ERVL 105040 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr10-166 chr10 15097058 15097302 + 22.2 0.000 promoter-TSS (NM_001265601) promoter-TSS (NM_001265601) 0 NM_001265601 10557 Hs.94986 NM_006414 ENSG00000152464 RPP38 - ribonuclease P/MRP subunit p38 protein-coding chr16-630 chr16 8849068 8849312 + 22.2 0.000 promoter-TSS (NR_147908) promoter-TSS (NR_147908) -279 NR_147908 100130283 Hs.735515 NR_147908 LOC100130283 - uncharacterized LOC100130283 ncRNA chr1-1171 chr1 66464894 66465138 + 22.2 0.000 Intergenic Intergenic -68577 NM_001308203 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr5-700 chr5 158385024 158385268 + 22.2 0.000 intron (NR_109888, intron 1 of 6) MLT1M|LTR|ERVL-MaLR 24627 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr9-660 chr9 79686406 79686650 + 22.2 0.000 intron (NR_104239, intron 9 of 20) MLT1C|LTR|ERVL-MaLR 113351 NM_001351543 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding chr1-654 chr1 151511278 151511522 + 22.2 0.000 promoter-TSS (NM_020770) promoter-TSS (NM_020770) 13 NM_020770 57530 Hs.591464 NM_020770 ENSG00000143375 CGN - cingulin protein-coding chr9-349 chr9 3526323 3526567 + 22.2 0.000 promoter-TSS (NM_001282116) promoter-TSS (NM_001282116) -444 NM_134428 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding chr17-325 chr17 2041946 2042190 + 22.2 0.000 promoter-TSS (NM_080822) promoter-TSS (NM_080822) 46 NM_080822 124641 Hs.513856 NM_080822 ENSG00000262664 OVCA2 - OVCA2 serine hydrolase domain containing protein-coding chr6-345 chr6 17417958 17418202 + 22.2 0.000 intron (NM_006366, intron 1 of 12) intron (NM_006366, intron 1 of 12) 24485 NM_006366 10486 Hs.132902 NM_006366 ENSG00000112186 CAP2 - cyclase associated actin cytoskeleton regulatory protein 2 protein-coding chr2-1777 chr2 101124962 101125206 + 22.2 0.000 intron (NM_001102426, intron 1 of 19) intron (NM_001102426, intron 1 of 19) 26363 NR_138475 11138 Hs.442657 NM_007063 ENSG00000204634 TBC1D8 AD3|GRAMD8|HBLP1|TBC1D8A|VRP TBC1 domain family member 8 protein-coding chr9-779 chr9 69131750 69131994 + 22.2 0.000 intron (NM_001369871, intron 1 of 24) MER68|LTR|ERVL 8857 NM_001369871 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr15-334 chr15 76470811 76471055 + 22.2 0.000 intron (NR_148227, intron 25 of 32) intron (NR_148227, intron 25 of 32) -115714 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA chr10-787 chr10 8059924 8060168 + 22.2 0.000 intron (NM_002051, intron 3 of 5) intron (NM_002051, intron 3 of 5) 5358 NM_002051 2625 Hs.524134 NM_002051 ENSG00000107485 GATA3 HDR|HDRS GATA binding protein 3 protein-coding chr7-515 chr7 64313781 64314025 + 22.2 0.000 promoter-TSS (NM_001170905) promoter-TSS (NM_001170905) 30 NM_001294255 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chr5-808 chr5 143400541 143400785 + 22.2 0.000 exon (NM_001018075, exon 2 of 9) exon (NM_001018075, exon 2 of 9) 2620 NM_001364182 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr2-1217 chr2 33321453 33321697 + 22.2 0.000 intron (NM_001166264, intron 20 of 28) intron (NM_001166264, intron 20 of 28) -96941 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA chr12-874 chr12 95700272 95700516 + 22.2 0.000 intron (NM_001329701, intron 5 of 9) MER5A|DNA|hAT-Charlie 51139 NR_077225 100132594 Hs.676211 NR_077225 ENSG00000257150 PGAM1P5 - phosphoglycerate mutase 1 pseudogene 5 pseudo chr3-483 chr3 58093896 58094140 + 22.2 0.000 intron (NM_001164318, intron 4 of 45) L1MD1|LINE|L1 76617 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr7-597 chr7 128831462 128831706 + 22.2 0.000 intron (NM_001127487, intron 1 of 46) intron (NM_001127487, intron 1 of 46) 1155 NM_001458 2318 Hs.58414 NM_001458 ENSG00000128591 FLNC ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5 filamin C protein-coding chr7-433 chr7 130887184 130887428 + 22.2 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -9767 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr11-720 chr11 44361755 44361999 + 22.2 0.000 Intergenic Intergenic -51738 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr4-205 chr4 55948090 55948334 + 22.2 0.000 promoter-TSS (NM_025009) promoter-TSS (NM_025009) -733 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr6-554 chr6 133099652 133099896 + 22.2 0.000 intron (NR_026969, intron 2 of 3) intron (NR_026969, intron 2 of 3) 11694 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr13-65 chr13 33542463 33542707 + 22.2 0.000 intron (NM_001243476, intron 3 of 17) CpG 134209 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr19-637 chr19 45398255 45398499 + 22.2 0.000 intron (NM_001142502, intron 1 of 12) CpG-14692 6692 NM_006663 10848 Hs.466937 NM_006663 ENSG00000104881 PPP1R13L IASPP|NKIP1|RAI|RAI4 protein phosphatase 1 regulatory subunit 13 like protein-coding chr22-359 chr22 45906189 45906433 + 22.2 0.000 Intergenic Intergenic 70851 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr9-505 chr9 21836418 21836662 + 22.2 0.000 intron (NM_002451, intron 4 of 7) intron (NM_002451, intron 4 of 7) 33904 NM_002451 4507 Hs.193268 NM_002451 ENSG00000099810 MTAP BDMF|DMSFH|DMSMFH|HEL-249|LGMBF|MSAP|c86fus methylthioadenosine phosphorylase protein-coding chr13-67 chr13 113584557 113584801 + 22.2 0.000 promoter-TSS (NR_026580) promoter-TSS (NR_026580) -9 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr2-1495 chr2 97869248 97869492 + 22.2 0.000 intron (NM_015348, intron 4 of 40) intron (NM_015348, intron 4 of 40) 126578 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding chr12-895 chr12 114375965 114376209 + 22.2 0.000 intron (NM_000192, intron 7 of 8) L1MA9|LINE|L1 30057 NM_181486 6910 Hs.381715 NM_000192 ENSG00000089225 TBX5 HOS T-box transcription factor 5 protein-coding chr11-1665 chr11 125170480 125170724 + 22.2 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 5851 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr1-1197 chr1 155207029 155207273 + 22.2 0.000 intron (NM_001252608, intron 1 of 20) intron (NM_001252608, intron 1 of 20) 746 NM_007112 7059 Hs.169875 NM_007112 ENSG00000169231 THBS3 TSP3 thrombospondin 3 protein-coding chr6-622 chr6 121055674 121055918 + 22.2 0.000 Intergenic L1M8|LINE|L1 278684 NM_152730 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr16-1123 chr16 55470714 55470958 + 22.2 0.000 Intergenic Intergenic -7994 NM_001302508 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr9-272 chr9 34376876 34377120 + 22.2 0.000 promoter-TSS (NM_020702) promoter-TSS (NM_020702) -100 NM_020702 57462 Hs.522083 NM_020702 ENSG00000164976 MYORG IBGC7|KIAA1161|NET37 myogenesis regulating glycosidase (putative) protein-coding chr15-207 chr15 80153127 80153371 + 22.2 0.000 intron (NM_000137, intron 1 of 13) intron (NM_000137, intron 1 of 13) 250 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr1-1916 chr1 209048424 209048668 + 22.2 0.000 Intergenic Intergenic 76092 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr1-1929 chr1 225482595 225482839 + 22.2 0.000 Intergenic Intergenic -53862 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr5-310 chr5 88769233 88769477 + 22.2 0.000 intron (NM_001364333, intron 3 of 9) intron (NM_001364333, intron 3 of 9) 16156 NM_001364356 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr12-1247 chr12 121045136 121045380 + 22.2 0.000 Intergenic Intergenic -6016 NM_003733 8638 Hs.118633 NM_003733 ENSG00000135114 OASL OASL1|OASLd|TRIP-14|TRIP14|p59 OASL|p59-OASL|p59OASL 2'-5'-oligoadenylate synthetase like protein-coding chr17-242 chr17 18153902 18154146 + 22.2 0.000 intron (NM_016239, intron 42 of 64) intron (NM_016239, intron 42 of 64) -29804 NM_017758 54890 Hs.744130 NM_017758 ENSG00000091542 ALKBH5 ABH5|OFOXD|OFOXD1 alkB homolog 5, RNA demethylase protein-coding chr3-957 chr3 48591402 48591646 + 22.2 0.000 exon (NM_000094, exon 12 of 118) exon (NM_000094, exon 12 of 118) 3636 NM_000094 1294 Hs.476218 NM_000094 ENSG00000114270 COL7A1 EBD1|EBDCT|EBR1|NDNC8 collagen type VII alpha 1 chain protein-coding chr20-148 chr20 58888820 58889064 + 22.2 0.000 promoter-TSS (NR_126334) promoter-TSS (NR_126334) -132 NR_126334 101927932 Hs.736856 NR_126334 LOC101927932 - uncharacterized LOC101927932 ncRNA chr6-444 chr6 12289989 12290233 + 22.2 0.000 promoter-TSS (NM_001955) promoter-TSS (NM_001955) -250 NM_001955 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr3-803 chr3 189132405 189132649 + 22.2 0.000 Intergenic Intergenic -39444 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding chr6-837 chr6 106163477 106163721 + 22.2 0.000 Intergenic Intergenic 64658 NM_182907 639 Hs.436023 NM_001198 ENSG00000057657 PRDM1 BLIMP1|PRDI-BF1 PR/SET domain 1 protein-coding chr17-573 chr17 81365281 81365525 + 22.2 0.000 Intergenic Intergenic 19722 NM_001347841 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr3-1354 chr3 99108647 99108891 + 22.2 0.000 Intergenic Intergenic -207074 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding chr13-139 chr13 32315436 32315680 + 22.2 0.000 promoter-TSS (NM_000059) promoter-TSS (NM_000059) 78 NM_000059 675 Hs.34012 NM_000059 ENSG00000139618 BRCA2 BRCC2|BROVCA2|FACD|FAD|FAD1|FANCD|FANCD1|GLM3|PNCA2|XRCC11 BRCA2 DNA repair associated protein-coding chr12-950 chr12 47377794 47378038 + 22.2 0.000 Intergenic Intergenic -13647 NR_039715 100616478 NR_039715 ENSG00000264906 MIR4494 - microRNA 4494 ncRNA chr3-767 chr3 127791049 127791293 + 22.2 0.000 intron (NM_001003794, intron 2 of 7) intron (NM_001003794, intron 2 of 7) 31711 NM_007283 11343 Hs.277035 NM_007283 ENSG00000074416 MGLL HU-K5|HUK5|MAGL|MGL monoglyceride lipase protein-coding chr10-547 chr10 110211158 110211402 + 22.2 0.000 intron (NM_001008541, intron 1 of 4) intron (NM_001008541, intron 1 of 4) 1049 NM_001008541 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding chr21-141 chr21 45972269 45972513 + 22.2 0.000 promoter-TSS (NR_109931) promoter-TSS (NR_109931) -579 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr12-303 chr12 92928958 92929202 + 22.2 0.000 5' UTR (NM_003566, exon 1 of 29) 5' UTR (NM_003566, exon 1 of 29) 215 NM_003566 8411 Hs.567367 NM_003566 ENSG00000102189 EEA1 MST105|MSTP105|ZFYVE2 early endosome antigen 1 protein-coding chr6-430 chr6 151276281 151276525 + 22.2 0.000 intron (NM_005100, intron 2 of 4) intron (NM_005100, intron 2 of 4) 36436 NM_005100 9590 Hs.371240 NM_005100 ENSG00000131016 AKAP12 AKAP250|SSeCKS A-kinase anchoring protein 12 protein-coding chr19-498 chr19 48812312 48812556 + 22.2 0.000 TTS (NM_016246) TTS (NM_016246) -1405 NM_001284325 587 Hs.512670 NM_001190 ENSG00000105552 BCAT2 BCAM|BCATM|BCT2|PP18 branched chain amino acid transaminase 2 protein-coding chr6-684 chr6 44788764 44789008 + 22.2 0.000 Intergenic Intergenic -237005 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA chr22-519 chr22 43210151 43210395 + 22.2 0.000 intron (NM_173050, intron 18 of 21) intron (NM_173050, intron 18 of 21) -2401 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr8-180 chr8 140636022 140636266 + 22.2 0.000 promoter-TSS (NM_012154) promoter-TSS (NM_012154) -511 NM_001164623 27161 Hs.660189 NM_012154 ENSG00000123908 AGO2 CASC7|EIF2C2|LINC00980|PPD|Q10 argonaute RISC catalytic component 2 protein-coding chr2-1840 chr2 147058607 147058851 + 22.2 0.000 Intergenic LTR26D|LTR|ERV1 471672 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr7-801 chr7 974224 974468 + 22.2 0.000 intron (NM_001031617, intron 1 of 2) AluJb|SINE|Alu 1203 NM_001031617 90639 Hs.121593 NM_001031617 ENSG00000240230 COX19 - cytochrome c oxidase assembly factor COX19 protein-coding chr20-425 chr20 40400462 40400706 + 22.2 0.000 Intergenic Intergenic 288652 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding chr7-1012 chr7 108570338 108570582 + 22.2 0.000 promoter-TSS (NM_001130475) promoter-TSS (NM_001130475) 586 NM_012328 4189 Hs.732494 NM_012328 ENSG00000128590 DNAJB9 ERdj4|MDG-1|MDG1|MST049|MSTP049 DnaJ heat shock protein family (Hsp40) member B9 protein-coding chr8-519 chr8 102729532 102729776 + 22.2 0.000 Intergenic Intergenic 73406 NR_160672 101927245 NR_160672 LOC101927245 - uncharacterized LOC101927245 ncRNA chr5-939 chr5 150588023 150588267 + 22.2 0.000 Intergenic Intergenic -12931 NM_001166208 11346 Hs.435228 NM_007286 ENSG00000171992 SYNPO - synaptopodin protein-coding chr7-585 chr7 100826950 100827194 + 22.2 0.000 5' UTR (NM_004444, exon 1 of 17) intron (NM_001363494, intron 1 of 10) 203 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr10-258 chr10 14959524 14959768 + 22.2 0.000 intron (NR_147060, intron 1 of 2) CpG 258 NR_147060 644890 Hs.257249 NM_001080836 ENSG00000197889 MEIG1 SPATA39|bA2K17.3 meiosis/spermiogenesis associated 1 protein-coding chr12-289 chr12 6278673 6278917 + 22.2 0.000 Intergenic CpG -31641 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding chr10-602 chr10 132446302 132446546 + 22.2 0.000 intron (NR_149317, intron 2 of 2) intron (NR_149317, intron 2 of 2) 1235 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr10-958 chr10 133103485 133103729 + 22.2 0.000 intron (NM_001083909, intron 5 of 6) intron (NM_001083909, intron 5 of 6) 1361 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr15-375 chr15 57551731 57551975 + 22.2 0.000 Intergenic Intergenic -40051 NM_001018091 145781 Hs.437256 NM_001018090 ENSG00000137878 GCOM1 GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom GRINL1A complex locus 1 protein-coding chr4-988 chr4 57496780 57497024 + 22.2 0.000 Intergenic Intergenic 71030 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr6-511 chr6 43790208 43790452 + 22.2 0.000 Intergenic Intergenic 18362 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr21-86 chr21 43768364 43768608 + 22.2 0.000 Intergenic Intergenic 7889 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr1-812 chr1 15975956 15976200 + 22.2 0.000 promoter-TSS (NM_001324138) promoter-TSS (NM_001324138) 54 NM_001324137 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr6-348 chr6 35495339 35495583 + 22.2 0.000 intron (NM_003214, intron 1 of 12) intron (NM_003214, intron 1 of 12) 1618 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr1-1705 chr1 28928167 28928411 + 22.2 0.000 intron (NM_001166006, intron 1 of 14) intron (NM_001166006, intron 1 of 14) 13713 NM_001166006 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr7-1339 chr7 91357491 91357735 + 22.2 0.000 Intergenic MIR|SINE|MIR 93180 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr8-664 chr8 101515453 101515697 + 22.2 0.000 intron (NM_001330593, intron 1 of 15) intron (NM_001330593, intron 1 of 15) 23136 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr22-217 chr22 46816440 46816684 + 22.2 0.000 intron (NM_001284305, intron 4 of 12) intron (NM_001284305, intron 4 of 12) 42635 NM_001284305 25771 Hs.435044 NM_014346 ENSG00000054611 TBC1D22A C22orf4|HSC79E021 TBC1 domain family member 22A protein-coding chr3-1056 chr3 172318040 172318284 + 22.2 0.000 intron (NM_001135095, intron 11 of 25) intron (NM_001135095, intron 11 of 25) 130294 NM_198407 2693 Hs.130212 NM_004122 ENSG00000121853 GHSR GHDP growth hormone secretagogue receptor protein-coding chr2-1389 chr2 227107234 227107478 + 22.2 0.000 intron (NM_000092, intron 12 of 47) MER20|DNA|hAT-Charlie 57203 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr5-589 chr5 73189181 73189425 + 22.2 0.000 Intergenic Intergenic 12658 NR_134291 340090 Hs.434311 NR_134291 LOC340090 - uncharacterized LOC340090 ncRNA chr19-1236 chr19 36666615 36666859 + 22.2 0.000 promoter-TSS (NM_001322826) promoter-TSS (NM_001322826) 100 NM_153257 92283 Hs.590972 NM_153257 ENSG00000197808 ZNF461 GIOT-1|GIOT1|HZF28 zinc finger protein 461 protein-coding chr6-437 chr6 166032744 166032988 + 22.1 0.000 Intergenic L1M4a2|LINE|L1 -44827 NR_026861 90632 Hs.31917 NR_026860 ENSG00000112541 LINC00473 C6orf176|LNC473|bA142J11.1 long intergenic non-protein coding RNA 473 ncRNA chr10-320 chr10 62264665 62264909 + 22.1 0.000 intron (NM_001282941, intron 1 of 4) MER5B|DNA|hAT-Charlie 4057 NM_145307 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr1-534 chr1 19210283 19210527 + 22.1 0.000 promoter-TSS (NR_135115) promoter-TSS (NR_135115) 19 NR_135114 101927895 Hs.660534 NR_135114 ENSG00000230424 EMC1-AS1 - EMC1 antisense RNA 1 ncRNA chr10-756 chr10 112202844 112203088 + 22.1 0.000 Intergenic Intergenic -19201 NM_001244949 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr4-959 chr4 41203404 41203648 + 22.1 0.000 intron (NM_173075, intron 1 of 16) intron (NM_173075, intron 1 of 16) 11016 NM_004307 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr1-2370 chr1 45669320 45669564 + 22.1 0.000 intron (NM_021639, intron 2 of 12) AluJr|SINE|Alu 17091 NM_021639 60313 Hs.238432 NM_021639 ENSG00000159592 GPBP1L1 SP192 GC-rich promoter binding protein 1 like 1 protein-coding chr7-1307 chr7 66326688 66326932 + 22.1 0.000 intron (NM_003596, intron 3 of 5) intron (NM_003596, intron 3 of 5) 73598 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr5-1160 chr5 158075407 158075651 + 22.1 0.000 Intergenic Intergenic -216384 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr2-742 chr2 47237511 47237755 + 22.1 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -60697 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr20-101 chr20 3408069 3408313 + 22.1 0.000 promoter-TSS (NM_001009984) promoter-TSS (NM_001009984) -529 NM_001009984 25943 Hs.516853 NM_001009984 ENSG00000088854 C20orf194 - chromosome 20 open reading frame 194 protein-coding chr20-655 chr20 62688839 62689083 + 22.1 0.000 Intergenic Intergenic -19875 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr1-1281 chr1 17878937 17879181 + 22.1 0.000 Intergenic Intergenic 123726 NM_030812 81569 Hs.2149 NM_030812 ENSG00000117148 ACTL8 CT57 actin like 8 protein-coding chr3-1201 chr3 196407039 196407283 + 22.1 0.000 intron (NM_015562, intron 2 of 10) intron (NM_015562, intron 2 of 10) -24224 NR_046745 100874034 Hs.617990 NR_046745 UBXN7-AS1 - UBXN7 antisense RNA 1 ncRNA chr19-1152 chr19 1960062 1960306 + 22.1 0.000 intron (NM_001319, intron 1 of 11) intron (NM_001319, intron 1 of 11) -5635 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr18-262 chr18 3305353 3305597 + 22.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 42756 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding chr2-1344 chr2 186849410 186849654 + 22.1 0.000 promoter-TSS (NM_182521) promoter-TSS (NM_182521) -362 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding chr2-1746 chr2 81993690 81993934 + 22.1 0.000 Intergenic Intergenic -526866 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr17-844 chr17 16171650 16171894 + 22.1 0.000 intron (NM_001190438, intron 1 of 18) intron (NM_001190438, intron 1 of 18) -18576 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr2-1868 chr2 174235706 174235950 + 22.1 0.000 intron (NM_001011708, intron 1 of 9) L1MEc|LINE|L1 12704 NM_001328688 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding chr9-534 chr9 108387068 108387312 + 22.1 0.000 Intergenic Intergenic 468796 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr19-674 chr19 13082534 13082778 + 22.1 0.000 intron (NM_001365982, intron 7 of 8) intron (NM_001365982, intron 7 of 8) 20202 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr6-213 chr6 116370792 116371036 + 22.1 0.000 promoter-TSS (NM_001322943) promoter-TSS (NM_001322943) -33 NM_013352 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr4-1072 chr4 140049269 140049513 + 22.1 0.000 intron (NM_018717, intron 1 of 4) intron (NM_018717, intron 1 of 4) -78624 NR_147610 101927516 Hs.662570 NR_147610 LOC101927516 - uncharacterized LOC101927516 ncRNA chr14-531 chr14 52927133 52927377 + 22.1 0.000 intron (NM_006832, intron 2 of 14) intron (NM_006832, intron 2 of 14) 23795 NM_001135000 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr15-348 chr15 38257597 38257841 + 22.1 0.000 intron (NM_152594, intron 1 of 6) intron (NM_152594, intron 1 of 6) 4883 NM_152594 161742 Hs.525781 NM_152594 ENSG00000166068 SPRED1 LGSS|NFLS|PPP1R147|hSpred1|spred-1 sprouty related EVH1 domain containing 1 protein-coding chr16-310 chr16 31215359 31215603 + 22.1 0.000 TTS (NM_152901) TTS (NM_152901) 1362 NM_001008274 493829 Hs.661859 NM_001008274 ENSG00000177238 TRIM72 MG53 tripartite motif containing 72 protein-coding chr1-362 chr1 156591640 156591884 + 22.1 0.000 promoter-TSS (NM_144772) promoter-TSS (NM_144772) -14 NM_144772 128240 Hs.528320 NM_144772 ENSG00000163382 NAXE AIBP|APOA1BP|PEBEL|YJEFN1 NAD(P)HX epimerase protein-coding chr1-1008 chr1 24413591 24413835 + 22.1 0.000 promoter-TSS (NM_001199014) promoter-TSS (NM_001199014) 59 NM_178122 90529 Hs.403187 NM_178122 ENSG00000001460 STPG1 C1orf201|MAPO2 sperm tail PG-rich repeat containing 1 protein-coding chr5-141 chr5 40798256 40798500 + 22.1 0.000 promoter-TSS (NM_001355037) promoter-TSS (NM_001355037) -183 NM_006251 5562 Hs.43322 NM_006251 ENSG00000132356 PRKAA1 AMPK|AMPKa1 protein kinase AMP-activated catalytic subunit alpha 1 protein-coding chr9-1375 chr9 133844627 133844871 + 22.1 0.000 intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -104794 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr6-471 chr6 151764456 151764700 + 22.1 0.000 intron (NM_001122742, intron 2 of 9) intron (NM_001122742, intron 2 of 9) -41095 NM_001122741 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding chr1-725 chr1 156130076 156130320 + 22.1 0.000 intron (NM_001282624, intron 2 of 10) intron (NM_001282624, intron 2 of 10) 4028 NM_001257374 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr11-1029 chr11 118917481 118917725 + 22.1 0.000 Intergenic Intergenic 6895 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr14-741 chr14 69657911 69658155 + 22.1 0.000 intron (NM_014734, intron 1 of 5) intron (NM_014734, intron 1 of 5) 46437 NM_014734 9766 Hs.440025 NM_014734 ENSG00000100647 SUSD6 DRAGO|KIAA0247 sushi domain containing 6 protein-coding chr3-923 chr3 11610055 11610299 + 22.1 0.000 intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) -5596 NM_001284391 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr9-550 chr9 132161387 132161631 + 22.1 0.000 promoter-TSS (NM_032536) promoter-TSS (NM_032536) -549 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr16-835 chr16 64365574 64365818 + 22.1 0.000 Intergenic Intergenic 756367 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr5-1089 chr5 119943220 119943464 + 22.1 0.000 Intergenic Intergenic 313783 NM_001163991 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding chr3-1162 chr3 141402697 141402941 + 22.1 0.000 intron (NM_001350100, intron 1 of 3) CpG 470 NM_001350100 253461 Hs.518301 NM_152535 ENSG00000177311 ZBTB38 CIBZ|PPP1R171|ZNF921 zinc finger and BTB domain containing 38 protein-coding chr2-1943 chr2 220090059 220090303 + 22.1 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -183616 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr3-959 chr3 49176691 49176935 + 22.1 0.000 TTS (NM_173546) TTS (NM_173546) 5215 NM_173546 200942 Hs.13781 NM_173546 ENSG00000185909 KLHDC8B CHL kelch domain containing 8B protein-coding chr10-650 chr10 77939632 77939876 + 22.1 0.000 Intergenic Intergenic 12942 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr3-1262 chr3 45948595 45948839 + 22.1 0.000 TTS (NM_006564) TTS (NM_006564) 5253 NM_006564 10663 Hs.34526 NM_006564 ENSG00000172215 CXCR6 BONZO|CD186|STRL33|TYMSTR C-X-C motif chemokine receptor 6 protein-coding chr8-338 chr8 37851473 37851717 + 22.1 0.000 Intergenic Intergenic -1734 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr20-156 chr20 2102658 2102902 + 22.1 0.000 exon (NM_080836, exon 2 of 4) exon (NM_080836, exon 2 of 4) 953 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr15-176 chr15 60391232 60391476 + 22.1 0.000 intron (NM_001136015, intron 1 of 13) intron (NM_001136015, intron 1 of 13) 6632 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr10-544 chr10 104329398 104329642 + 22.1 0.000 promoter-TSS (NM_001272012) promoter-TSS (NM_001272012) -528 NM_001272012 85450 Hs.523252 NM_033397 ENSG00000148841 ITPRIP DANGER|KIAA1754|bA127L20|bA127L20.2 inositol 1,4,5-trisphosphate receptor interacting protein protein-coding chr20-637 chr20 57038852 57039096 + 22.1 0.000 Intergenic L2b|LINE|L2 -174722 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr13-102 chr13 32031393 32031637 + 22.1 0.000 promoter-TSS (NM_023037) promoter-TSS (NM_023037) 124 NR_103839 100507099 Hs.536364 NR_103839 FRY-AS1 - FRY antisense RNA 1 ncRNA chr7-828 chr7 27611210 27611454 + 22.1 0.000 intron (NM_152740, intron 4 of 7) intron (NM_152740, intron 4 of 7) -4642 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA chr5-988 chr5 14445899 14446143 + 22.1 0.000 intron (NM_007118, intron 34 of 56) intron (NM_007118, intron 34 of 56) -17962 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA chr16-751 chr16 87406496 87406740 + 22.1 0.000 3' UTR (NM_015144, exon 13 of 13) 3' UTR (NM_015144, exon 13 of 13) 14282 NM_022818 81631 Hs.356061 NM_022818 ENSG00000140941 MAP1LC3B ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a microtubule associated protein 1 light chain 3 beta protein-coding chr11-623 chr11 69656354 69656598 + 22.1 0.000 Intergenic Intergenic 15371 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr13-205 chr13 31045873 31046117 + 22.1 0.000 Intergenic Intergenic 113339 NM_152325 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr13-116 chr13 50124047 50124291 + 22.1 0.000 intron (NR_109974, intron 2 of 6) CpG 1372 NR_152566 8847 Hs.547964 NR_002612 ENSG00000231607 DLEU2 ALT1|BCMSUN|DLB2|LEU2|LINC00022|MIR15AHG|NCRNA00022|RFP2|RFP2OS|TRIM13OS deleted in lymphocytic leukemia 2 ncRNA chr10-705 chr10 132574851 132575095 + 22.1 0.000 intron (NM_005539, intron 1 of 15) intron (NM_005539, intron 1 of 15) 37186 NM_005539 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr3-182 chr3 71064928 71065172 + 22.1 0.000 promoter-TSS (NM_001244813) promoter-TSS (NM_001244813) -126 NM_001244813 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr2-1809 chr2 121338437 121338681 + 22.1 0.000 3' UTR (NM_001142274, exon 38 of 38) 3' UTR (NM_001142274, exon 38 of 38) -53357 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr11-831 chr11 123173387 123173631 + 22.1 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) 21739 NM_024769 79827 Hs.591949 NM_024769 ENSG00000166250 CLMP ACAM|ASAM|CSBM|CSBS CXADR like membrane protein protein-coding chr21-68 chr21 45875219 45875463 + 22.1 0.000 intron (NM_001348242, intron 5 of 17) intron (NM_001348242, intron 5 of 17) 25380 NM_001130141 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding chr4-615 chr4 121790145 121790389 + 22.1 0.000 Intergenic Intergenic -11056 NM_005033 5393 Hs.91728 NM_005033 ENSG00000123737 EXOSC9 PCH1D|PM/Scl-75|PMSCL1|RRP45|Rrp45p|p5|p6 exosome component 9 protein-coding chr11-877 chr11 44306685 44306929 + 22.1 0.000 intron (NM_021926, intron 1 of 3) intron (NM_021926, intron 1 of 3) 3332 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr9-1068 chr9 35277028 35277272 + 22.1 0.000 intron (NM_006377, intron 7 of 38) intron (NM_006377, intron 7 of 38) -64746 NM_001371188 chr16-437 chr16 74606727 74606971 + 22.1 0.000 exon (NM_012201, exon 1 of 27) exon (NM_012201, exon 1 of 27) 265 NR_027264 2734 Hs.109731 NM_012201 ENSG00000090863 GLG1 CFR-1|ESL-1|MG-160|MG160 golgi glycoprotein 1 protein-coding chrX-283 chrX 22300267 22300511 + 22.1 0.000 intron (NR_073010, intron 5 of 11) intron (NR_073010, intron 5 of 11) 27476 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr3-947 chr3 44993718 44993962 + 22.1 0.000 intron (NM_015004, intron 3 of 7) intron (NM_015004, intron 3 of 7) 17591 NR_023353 23016 Hs.719958 NM_015004 ENSG00000075914 EXOSC7 EAP1|RRP42|Rrp42p|hRrp42p|p8 exosome component 7 protein-coding chr10-353 chr10 905536 905780 + 22.1 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 26047 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr12-381 chr12 128823902 128824146 + 22.1 0.000 promoter-TSS (NM_145648) promoter-TSS (NM_145648) -66 NM_145648 121260 Hs.507260 NM_145648 ENSG00000139370 SLC15A4 FP12591|PHT1|PTR4 solute carrier family 15 member 4 protein-coding chr3-1289 chr3 49725984 49726228 + 22.1 0.000 3' UTR (NM_001242829, exon 6 of 6) 3' UTR (NM_001242829, exon 6 of 6) -2132 NM_013334 29925 Hs.567488 NM_013334 ENSG00000173540 GMPPB LGMDR19|MDDGA14|MDDGB14|MDDGC14 GDP-mannose pyrophosphorylase B protein-coding chr15-511 chr15 74783182 74783426 + 22.1 0.000 intron (NM_004383, intron 1 of 12) intron (NM_004383, intron 1 of 12) 1220 NM_004383 1445 Hs.77793 NM_004383 ENSG00000103653 CSK - C-terminal Src kinase protein-coding chr3-563 chr3 29915126 29915370 + 22.1 0.000 intron (NM_001003793, intron 10 of 14) intron (NM_001003793, intron 10 of 14) 18908 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA chr16-448 chr16 85594979 85595223 + 22.1 0.000 Intergenic Intergenic -16308 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16-978 chr16 86112406 86112650 + 22.1 0.000 Intergenic Intergenic -83653 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr17-1358 chr17 59668874 59669118 + 22.1 0.000 intron (NM_001288653, intron 14 of 31) intron (NM_001288653, intron 14 of 31) 38602 NM_016077 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding chr19-707 chr19 46600743 46600987 + 22.1 0.000 promoter-TSS (NM_001370551) promoter-TSS (NM_001370551) 51 NM_001370550 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding chr19-1678 chr19 58404908 58405152 + 22.1 0.000 Intergenic SVA_D|Retroposon|SVA -3619 NM_001363680 201514 Hs.439551 NM_173548 ENSG00000171574 ZNF584 - zinc finger protein 584 protein-coding chr16-970 chr16 84005416 84005660 + 22.1 0.000 Intergenic Intergenic 36619 NM_001080442 146167 NM_001080442 ENSG00000166558 SLC38A8 FVH2 solute carrier family 38 member 8 protein-coding chr12-1031 chr12 3151263 3151507 + 22.1 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 74006 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr5-844 chr5 173051691 173051935 + 22.1 0.000 Intergenic L2c|LINE|L2 -4539 NM_001168394 153222 Hs.484195 NM_153607 ENSG00000164463 CREBRF C5orf41|LRF CREB3 regulatory factor protein-coding chr17-1355 chr17 58402251 58402495 + 22.1 0.000 intron (NM_001305544, intron 2 of 9) intron (NM_001305544, intron 2 of 9) 348 NM_001305545 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr4-797 chr4 6876579 6876823 + 22.1 0.000 exon (NM_014743, exon 9 of 10) exon (NM_014743, exon 9 of 10) -32743 NM_001113361 57533 Hs.518611 NM_020773 ENSG00000132405 TBC1D14 - TBC1 domain family member 14 protein-coding chr1-1555 chr1 155560533 155560777 + 22.1 0.000 intron (NM_018489, intron 1 of 27) intron (NM_018489, intron 1 of 27) -1387 NR_147964 645676 Hs.568693 NR_027023 ENSG00000235919 ASH1L-AS1 - ASH1L antisense RNA 1 ncRNA chr17-436 chr17 7590815 7591059 + 22.1 0.000 promoter-TSS (NM_006942) promoter-TSS (NM_006942) -843 NM_006942 6665 Hs.95582 NM_006942 ENSG00000129194 SOX15 SOX20|SOX26|SOX27 SRY-box transcription factor 15 protein-coding chr2-1779 chr2 101396377 101396621 + 22.1 0.000 TTS (NM_001145664) TTS (NM_001145664) -8996 NM_153836 200407 Hs.732289 NM_153836 ENSG00000175874 CREG2 - cellular repressor of E1A stimulated genes 2 protein-coding chr2-1111 chr2 109296728 109296972 + 22.1 0.000 intron (NM_001099289, intron 1 of 9) intron (NM_001099289, intron 1 of 9) 16775 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA chr1-2646 chr1 221046421 221046665 + 22.1 0.000 Intergenic Intergenic -166403 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA chr2-1300 chr2 120908662 120908906 + 22.1 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 116503 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chr3-696 chr3 11499047 11499291 + 22.1 0.000 intron (NM_001349238, intron 17 of 17) MER119|DNA|hAT-Charlie 69629 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr12-798 chr12 3292794 3293038 + 22.1 0.000 Intergenic Intergenic 73206 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr3-291 chr3 146161251 146161495 + 22.1 0.000 promoter-TSS (NM_182943) promoter-TSS (NM_182943) 122 NM_000935 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr9-682 chr9 116152198 116152442 + 22.1 0.000 Intergenic Intergenic -1471 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr4-403 chr4 38819497 38819741 + 22.1 0.000 Intergenic LTR78B|LTR|ERV1 -14828 NM_003263 7096 Hs.621817 NM_003263 ENSG00000174125 TLR1 CD281|TIL|TIL. LPRS5|rsc786 toll like receptor 1 protein-coding chr11-1517 chr11 64056557 64056801 + 22.1 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -47211 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr1-1087 chr1 178537162 178537406 + 22.1 0.000 Intergenic Intergenic -5512 NR_033186 400798 Hs.668085 NM_207467 ENSG00000213057 C1orf220 - chromosome 1 open reading frame 220 (putative) ncRNA chr9-771 chr9 25724508 25724752 + 22.1 0.000 Intergenic Tigger6a|DNA|TcMar-Tigger -45772 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr10-400 chr10 46023263 46023507 + 22.1 0.000 promoter-TSS (NM_005437) promoter-TSS (NM_005437) 73 NM_005437 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding chr9-664 chr9 89180191 89180435 + 22.1 0.000 Intergenic Intergenic -1495 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr3-1025 chr3 136350197 136350441 + 22.1 0.000 intron (NM_005862, intron 28 of 33) L1M4b|LINE|L1 99979 NM_000532 5096 Hs.63788 NM_000532 ENSG00000114054 PCCB - propionyl-CoA carboxylase subunit beta protein-coding chr1-1222 chr1 208090237 208090481 + 22.1 0.000 intron (NM_025179, intron 9 of 31) intron (NM_025179, intron 9 of 31) 154025 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr1-742 chr1 1349667 1349911 + 22.1 0.000 promoter-TSS (NM_001330311) promoter-TSS (NM_001330311) -371 NM_001330311 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr5-254 chr5 10249565 10249809 + 22.1 0.000 promoter-TSS (NM_001306153) promoter-TSS (NM_001306153) 201 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding chr11-1672 chr11 128299316 128299560 + 21.9 0.000 Intergenic Intergenic 90672 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr15-472 chr15 46004048 46004292 + 21.9 0.000 Intergenic L1MA1|LINE|L1 298975 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr7-925 chr7 26381513 26381757 + 21.9 0.000 intron (NR_136272, intron 1 of 1) MER47A|DNA|TcMar-Tigger -4934 NR_136270 105375304 Hs.735352 NR_136270 ENSG00000225792 LOC105375304 - uncharacterized LOC105375304 ncRNA chr7-735 chr7 55053374 55053618 + 21.9 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) 34464 NM_201283 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr20-404 chr20 11302484 11302728 + 21.9 0.000 Intergenic L2b|LINE|L2 -29223 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA chr4-671 chr4 8123369 8123613 + 21.9 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) 35322 NM_001130084 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr11-885 chr11 47233923 47234167 + 21.9 0.000 intron (NM_000107, intron 4 of 9) intron (NM_000107, intron 4 of 9) -14255 NM_001251935 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr12-560 chr12 1612237 1612481 + 21.9 0.000 Intergenic UCON29|DNA|PiggyBac? -4697 NM_030775 81029 Hs.306051 NM_030775 ENSG00000111186 WNT5B - Wnt family member 5B protein-coding chr19-710 chr19 47512776 47513020 + 21.9 0.000 intron (NM_003827, intron 1 of 10) intron (NM_003827, intron 1 of 10) 2165 NR_038456 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr10-1208 chr10 80265962 80266206 + 21.9 0.000 Intergenic Intergenic 18326 NR_136612 100130698 Hs.447456 NR_136612 LOC100130698 - uncharacterized LOC100130698 ncRNA chr9-724 chr9 133578695 133578939 + 21.9 0.000 3' UTR (NM_001080515, exon 2 of 2) 3' UTR (NM_001080515, exon 2 of 2) 1429 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr14-308 chr14 105389242 105389486 + 21.9 0.000 intron (NM_001100913, intron 19 of 24) intron (NM_001100913, intron 19 of 24) -9174 NM_001195082 647310 Hs.729499 NM_001195082 ENSG00000226174 TEX22 - testis expressed 22 protein-coding chr19-1185 chr19 9847076 9847320 + 21.9 0.000 intron (NM_006221, intron 2 of 3) intron (NM_006221, intron 2 of 3) 10977 NM_001304348 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr6-154 chr6 37705285 37705529 + 21.9 0.000 Intergenic Intergenic -7524 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding chr20-191 chr20 3807314 3807558 + 21.9 0.000 Intergenic Intergenic -1058 NR_109859 101929125 Hs.744106 NR_109859 ENSG00000275491 LINC01730 - long intergenic non-protein coding RNA 1730 ncRNA chr11-1210 chr11 116725881 116726125 + 21.9 0.000 Intergenic Intergenic 46984 NM_032725 84811 Hs.437341 NM_032725 ENSG00000137656 BUD13 Cwc26|fSAP71 BUD13 homolog protein-coding chr14-224 chr14 100214194 100214438 + 21.9 0.000 Intergenic CpG -24828 NM_003403 7528 Hs.388927 NM_003403 ENSG00000100811 YY1 DELTA|GADEVS|INO80S|NF-E1|UCRBP|YIN-YANG-1 YY1 transcription factor protein-coding chr19-824 chr19 43901656 43901900 + 21.9 0.000 promoter-TSS (NR_038334) promoter-TSS (NR_038334) 25 NR_038334 100505715 Hs.76561 NR_038334 ENSG00000267058 LOC100505715 - uncharacterized LOC100505715 ncRNA chr5-1165 chr5 161456072 161456316 + 21.9 0.000 intron (NM_000813, intron 5 of 9) intron (NM_000813, intron 5 of 9) 91930 NM_021911 2561 Hs.303527 NM_000813 ENSG00000145864 GABRB2 ICEE2 gamma-aminobutyric acid type A receptor beta2 subunit protein-coding chr4-583 chr4 6807637 6807881 + 21.9 0.000 intron (NM_014743, intron 2 of 9) intron (NM_014743, intron 2 of 9) 25027 NM_001100590 9778 Hs.79276 NM_014743 ENSG00000170871 KIAA0232 - KIAA0232 protein-coding chr2-1407 chr2 237441605 237441849 + 21.9 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -27520 NM_057167 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr11-830 chr11 123122606 123122850 + 21.9 0.000 intron (NM_024769, intron 1 of 6) intron (NM_024769, intron 1 of 6) -60592 NM_006597 3312 Hs.180414 NM_006597 ENSG00000109971 HSPA8 HEL-33|HEL-S-72p|HSC54|HSC70|HSC71|HSP71|HSP73|HSPA10|LAP-1|LAP1|NIP71 heat shock protein family A (Hsp70) member 8 protein-coding chr6-514 chr6 46510790 46511034 + 21.9 0.000 intron (NR_125837, intron 1 of 2) CR1-3_Croc|LINE|CR1 -18845 NM_001251973 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding chr2-918 chr2 33212151 33212395 + 21.9 0.000 intron (NM_206943, intron 7 of 33) intron (NM_206943, intron 7 of 33) 77676 NM_001166265 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr10-798 chr10 20622972 20623216 + 21.9 0.000 Intergenic Intergenic 71124 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr12-454 chr12 124039576 124039820 + 21.9 0.000 intron (NM_001347902, intron 2 of 4) intron (NM_001347902, intron 2 of 4) 66483 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr20-233 chr20 38201460 38201704 + 21.9 0.000 Intergenic Intergenic -35074 NM_001323316 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr16-634 chr16 12339922 12340166 + 21.9 0.000 intron (NM_032167, intron 15 of 20) intron (NM_032167, intron 15 of 20) 363310 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding chr17-607 chr17 35168306 35168550 + 21.9 0.000 intron (NM_001308281, intron 9 of 16) L2c|LINE|L2 20164 NM_001308281 146862 Hs.379636 NM_173167 ENSG00000141161 UNC45B CMYA4|CTRCT43|SMUNC45|UNC-45B|UNC45 unc-45 myosin chaperone B protein-coding chr1-1227 chr1 228346634 228346878 + 21.9 0.000 intron (NM_052843, intron 75 of 80) intron (NM_052843, intron 75 of 80) 50353 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr6-408 chr6 83199962 83200206 + 21.9 0.000 Intergenic ERVL-E-int|LTR|ERVL -6184 NM_001199917 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr17-1144 chr17 44909768 44910012 + 21.9 0.000 3' UTR (NM_001131019, exon 8 of 8) 3' UTR (NM_001131019, exon 8 of 8) 5610 NM_001131019 2670 Hs.514227 NM_002055 ENSG00000131095 GFAP ALXDRD glial fibrillary acidic protein protein-coding chr1-997 chr1 16017988 16018232 + 21.9 0.000 5' UTR (NM_001349683, exon 1 of 3) 5' UTR (NM_001349683, exon 1 of 3) 680 NM_001349688 27129 Hs.502612 NM_014424 ENSG00000173641 HSPB7 cvHSP heat shock protein family B (small) member 7 protein-coding chr2-700 chr2 171409682 171409926 + 21.9 0.000 intron (NM_024770, intron 1 of 9) MER76|LTR|ERVL 24186 NM_001321155 79828 Hs.135146 NM_024770 ENSG00000123600 METTL8 TIP methyltransferase like 8 protein-coding chr16-396 chr16 55509060 55509304 + 21.9 0.000 exon (NM_017839, exon 1 of 14) exon (NM_017839, exon 1 of 14) 110 NM_017839 54947 Hs.460857 NM_017839 ENSG00000087253 LPCAT2 AGPAT11|AYTL1|LysoPAFAT lysophosphatidylcholine acyltransferase 2 protein-coding chr7-993 chr7 96284869 96285113 + 21.9 0.000 intron (NM_001160210, intron 2 of 17) intron (NM_001160210, intron 2 of 17) 37107 NR_027662 10165 Hs.489190 NM_014251 ENSG00000004864 SLC25A13 ARALAR2|CITRIN|CTLN2 solute carrier family 25 member 13 protein-coding chr1-1378 chr1 109959938 109960182 + 21.9 0.000 Intergenic Intergenic -24705 NM_006621 10768 Hs.743973 NM_006621 ENSG00000168710 AHCYL1 DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA adenosylhomocysteinase like 1 protein-coding chr4-279 chr4 182143866 182144110 + 21.9 0.000 intron (NR_125905, intron 2 of 4) CpG-21660 527 NR_027107 90768 Hs.175465 NR_027107 TENM3-AS1 - TENM3 antisense RNA 1 ncRNA chr4-304 chr4 163540940 163541184 + 21.9 0.000 intron (NM_017923, intron 3 of 3) MIRc|SINE|MIR 46372 NM_018352 55319 Hs.267446 NM_018352 ENSG00000198498 TMA16 C4orf43 translation machinery associated 16 homolog protein-coding chr13-305 chr13 21683336 21683580 + 21.9 0.000 intron (NM_002010, intron 2 of 2) intron (NM_002010, intron 2 of 2) 12385 NM_002010 2254 Hs.111 NM_002010 ENSG00000102678 FGF9 FGF-9|GAF|HBFG-9|HBGF-9|SYNS3 fibroblast growth factor 9 protein-coding chr1-537 chr1 24322224 24322468 + 21.9 0.000 promoter-TSS (NM_021180) promoter-TSS (NM_021180) -694 NM_021180 57822 Hs.657920 NM_021180 ENSG00000158055 GRHL3 SOM|TFCP2L4|VWS2 grainyhead like transcription factor 3 protein-coding chr10-487 chr10 132331848 132332092 + 21.9 0.000 promoter-TSS (NM_001143759) promoter-TSS (NM_001143759) -90 NM_001318882 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr4-1020 chr4 89213117 89213361 + 21.9 0.000 Intergenic Intergenic 94561 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding chr10-717 chr10 5585293 5585537 + 21.9 0.000 Intergenic Intergenic 10703 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr1-1460 chr1 246067820 246068064 + 21.9 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 349470 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr12-164 chr12 42144772 42145016 + 21.9 0.000 promoter-TSS (NM_001099650) promoter-TSS (NM_001099650) -20 NM_173601 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr3-1169 chr3 153284348 153284592 + 21.9 0.000 Intergenic Intergenic 122244 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr6-327 chr6 107028165 107028409 + 21.9 0.000 promoter-TSS (NM_001142470) promoter-TSS (NM_001142470) 88 NM_016487 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr16-708 chr16 10080343 10080587 + 21.9 0.000 intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 101602 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding chr6-867 chr6 151576916 151577160 + 21.9 0.000 intron (NM_025059, intron 6 of 10) intron (NM_025059, intron 6 of 10) 83021 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr13-160 chr13 113491526 113491770 + 21.9 0.000 promoter-TSS (NM_001014283) promoter-TSS (NM_001014283) 627 NM_001349744 55002 Hs.317593 NM_017905 ENSG00000150403 TMCO3 C13orf11 transmembrane and coiled-coil domains 3 protein-coding chr19-692 chr19 38361622 38361866 + 21.9 0.000 exon (NM_021185, exon 17 of 29) exon (NM_021185, exon 17 of 29) -12806 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr9-496 chr9 136618182 136618426 + 21.9 0.000 Intergenic Intergenic -1123 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr1-986 chr1 3106978 3107222 + 21.9 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) -20875 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr10-276 chr10 122063241 122063485 + 21.9 0.000 intron (NM_206861, intron 3 of 19) intron (NM_206861, intron 3 of 19) -49522 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr16-657 chr16 67416039 67416283 + 21.9 0.000 intron (NM_001323627, intron 1 of 11) CpG 316 NM_013304 29800 Hs.624541 NM_013304 ENSG00000159714 ZDHHC1 C16orf1|DHHC-1|HSU90653|ZNF377 zinc finger DHHC-type containing 1 protein-coding chr6-901 chr6 7568035 7568279 + 21.9 0.000 intron (NM_001008844, intron 10 of 23) intron (NM_001008844, intron 10 of 23) -22041 NM_152551 154007 Hs.13366 NM_152551 ENSG00000168566 SNRNP48 C6orf151|dJ336K20B.1|dJ512B11.2 small nuclear ribonucleoprotein U11/U12 subunit 48 protein-coding chr2-649 chr2 216535449 216535693 + 21.9 0.000 Intergenic Intergenic 36727 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chrY-14 chrY 11293595 11293839 + 21.9 0.000 Intergenic Intergenic 1127873 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr9-409 chr9 136306828 136307072 + 21.9 0.000 promoter-TSS (NM_001291516) promoter-TSS (NM_001291516) -49 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr7-779 chr7 103344333 103344577 + 21.9 0.000 intron (NM_001362668, intron 1 of 17) CpG 312 NM_014377 27000 Hs.558476 NM_014377 ENSG00000105821 DNAJC2 MPHOSPH11|MPP11|ZRF1|ZUO1 DnaJ heat shock protein family (Hsp40) member C2 protein-coding chr16-475 chr16 10609248 10609492 + 21.9 0.000 Intergenic Intergenic -28772 NM_001424 2013 Hs.531561 NM_001424 ENSG00000213853 EMP2 XMP epithelial membrane protein 2 protein-coding chr1-977 chr1 1311144 1311388 + 21.9 0.000 TTS (NM_001256456) TTS (NM_001256456) 1300 NR_106785 102465435 NR_106785 ENSG00000283712 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA chr11-891 chr11 60924122 60924366 + 21.9 0.000 promoter-TSS (NM_017870) promoter-TSS (NM_017870) -216 NM_017870 54972 Hs.118552 NM_017870 ENSG00000006118 TMEM132A GBP|HSPA5BP1 transmembrane protein 132A protein-coding chr8-765 chr8 97831007 97831251 + 21.9 0.000 intron (NM_018407, intron 6 of 6) HERVH-int|LTR|ERV1 -37935 NM_001317748 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr7-1203 chr7 2785126 2785370 + 21.9 0.000 intron (NM_007353, intron 2 of 3) MIR3|SINE|MIR -22108 NM_001282440 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr1-974 chr1 235917541 235917785 + 21.9 0.000 Intergenic Intergenic -33950 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr1-1327 chr1 43472816 43473060 + 21.9 0.000 Intergenic LTR33|LTR|ERVL -18949 NM_001243526 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr11-861 chr11 10674600 10674844 + 21.9 0.000 intron (NM_130385, intron 1 of 20) intron (NM_130385, intron 1 of 20) 18852 NM_001100167 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr22-396 chr22 36380033 36380277 + 21.9 0.000 intron (NM_002473, intron 1 of 40) intron (NM_002473, intron 1 of 40) 7912 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr16-265 chr16 75555225 75555469 + 21.9 0.000 intron (NR_074083, intron 2 of 6) intron (NR_074083, intron 2 of 6) 905 NM_001077418 79583 Hs.156784 NM_001077416 ENSG00000205084 TMEM231 ALYE870|JBTS20|MKS11|PRO1886 transmembrane protein 231 protein-coding chr7-783 chr7 114921769 114922013 + 21.9 0.000 promoter-TSS (NM_199072) promoter-TSS (NM_199072) -263 NM_199072 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr12-357 chr12 132574059 132574303 + 21.9 0.000 intron (NM_001367871, intron 12 of 18) intron (NM_001367871, intron 12 of 18) -7816 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr3-697 chr3 12578082 12578326 + 21.9 0.000 intron (NM_001271707, intron 5 of 6) L1MEb|LINE|L1 21117 NM_014160 23609 Hs.591666 NM_014160 ENSG00000075975 MKRN2 HSPC070|RNF62 makorin ring finger protein 2 protein-coding chr5-1157 chr5 157511688 157511932 + 21.9 0.000 intron (NM_033274, intron 8 of 22) intron (NM_033274, intron 8 of 22) -51710 NR_136205 102724404 Hs.570889 NR_136204 LOC102724404 - uncharacterized LOC102724404 ncRNA chr13-94 chr13 97222211 97222455 + 21.9 0.000 promoter-TSS (NM_001306070) promoter-TSS (NM_001306070) 0 NM_144778 10150 Hs.657347 NM_144778 ENSG00000139793 MBNL2 MBLL|MBLL39|PRO2032 muscleblind like splicing regulator 2 protein-coding chr17-690 chr17 40113446 40113690 + 21.9 0.000 Intergenic Intergenic -8403 NM_001365920 339287 Hs.532786 NM_001012241 ENSG00000188895 MSL1 MSL-1 MSL complex subunit 1 protein-coding chr19-718 chr19 55116448 55116692 + 21.9 0.000 intron (NM_001271618, intron 1 of 21) intron (NM_001271618, intron 1 of 21) 1067 NM_001271618 54776 Hs.631579 NM_017607 ENSG00000125503 PPP1R12C AAVS1|LENG3|MBS85|p84|p85 protein phosphatase 1 regulatory subunit 12C protein-coding chr5-907 chr5 108461650 108461894 + 21.9 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -79674 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr7-199 chr7 128880119 128880363 + 21.9 0.000 intron (NM_001366122, intron 34 of 39) intron (NM_001366122, intron 34 of 39) 13911 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr10-1247 chr10 98404843 98405087 + 21.9 0.000 intron (NM_032709, intron 4 of 15) intron (NM_032709, intron 4 of 15) -9658 NR_031619 100302133 NR_031619 ENSG00000284415 MIR1287 MIRN1287|hsa-mir-1287|mir-1287 microRNA 1287 ncRNA chr2-609 chr2 53970417 53970661 + 21.9 0.000 promoter-TSS (NM_001320586) promoter-TSS (NM_001320586) 454 NM_014614 23198 Hs.413801 NM_014614 ENSG00000068878 PSME4 PA200 proteasome activator subunit 4 protein-coding chr11-942 chr11 102666355 102666599 + 21.9 0.000 Intergenic Intergenic 39292 NM_022122 64066 Hs.534479 NM_022122 ENSG00000137675 MMP27 MMP-27 matrix metallopeptidase 27 protein-coding chr1-1093 chr1 201585028 201585272 + 21.9 0.000 Intergenic Intergenic -63172 NM_020443 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr18-245 chr18 54224509 54224753 + 21.9 0.000 promoter-TSS (NM_003927) promoter-TSS (NM_003927) 38 NM_003927 8932 Hs.25674 NM_003927 ENSG00000134046 MBD2 DMTase|NY-CO-41 methyl-CpG binding domain protein 2 protein-coding chr13-310 chr13 27054360 27054604 + 21.9 0.000 Intergenic L2b|LINE|L2 -71051 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr7-825 chr7 16740313 16740557 + 21.9 0.000 Intergenic Intergenic -13320 NM_014399 27075 Hs.364544 NM_014399 ENSG00000106537 TSPAN13 NET-6|NET6|TM4SF13 tetraspanin 13 protein-coding chr2-1268 chr2 84938601 84938845 + 21.9 0.000 Intergenic Intergenic -32438 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr11-1224 chr11 120178490 120178734 + 21.9 0.000 Intergenic Intergenic 9635 NR_159965 107984399 Hs.638417 NR_159965 LOC107984399 - uncharacterized LOC107984399 ncRNA chr19-1601 chr19 39144431 39144675 + 21.9 0.000 intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) 18767 NM_001014832 10298 Hs.20447 NM_005884 ENSG00000130669 PAK4 - p21 (RAC1) activated kinase 4 protein-coding chr21-151 chr21 44016196 44016440 + 21.9 0.000 intron (NM_003274, intron 1 of 22) intron (NM_003274, intron 1 of 22) 4009 NM_003274 7109 Hs.126221 NM_003274 ENSG00000160218 TRAPPC10 EHOC-1|EHOC1|GT334|TMEM1|TRS130|TRS30 trafficking protein particle complex 10 protein-coding chr1-746 chr1 10796448 10796692 + 21.9 0.000 promoter-TSS (NM_017766) promoter-TSS (NM_017766) 76 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr13-307 chr13 24381957 24382201 + 21.9 0.000 Intergenic LTR75B|LTR|ERVL 50629 NR_131903 100861547 Hs.585625 NR_131903 ENSG00000261498 LINC00566 - long intergenic non-protein coding RNA 566 ncRNA chr3-822 chr3 21447379 21447623 + 21.9 0.000 intron (NM_024697, intron 4 of 7) intron (NM_024697, intron 4 of 7) 41775 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr10-646 chr10 72216122 72216366 + 21.9 0.000 promoter-TSS (NM_001198799) promoter-TSS (NM_001198799) 32 NM_001369108 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr19-1596 chr19 37999517 37999761 + 21.9 0.000 intron (NM_015073, intron 1 of 21) intron (NM_015073, intron 1 of 21) 92431 NM_015073 23094 Hs.655502 NM_015073 ENSG00000105738 SIPA1L3 CTRCT45|SPAL3|SPAR3 signal induced proliferation associated 1 like 3 protein-coding chr1-2346 chr1 39191634 39191878 + 21.9 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 107589 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr1-2641 chr1 218460357 218460601 + 21.9 0.000 intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) 17853 NR_125715 103611157 Hs.133379 NR_125715 ENSG00000281453 TGFB2-OT1 - TGFB2 overlapping transcript 1 ncRNA chr9-667 chr9 93051874 93052118 + 21.9 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -6692 NM_001287006 203328 Hs.88417 NM_145006 ENSG00000157303 SUSD3 - sushi domain containing 3 protein-coding chr14-803 chr14 103733744 103733988 + 21.9 0.000 TTS (NM_001198953) TTS (NM_001198953) 18122 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr9-443 chr9 129490071 129490315 + 21.9 0.000 intron (NR_038955, intron 1 of 4) L2b|LINE|L2 1533 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr2-190 chr2 119366854 119367098 + 21.9 0.000 promoter-TSS (NM_001178043) promoter-TSS (NM_001178043) 52 NM_001079862 1622 Hs.78888 NM_020548 ENSG00000155368 DBI ACBD1|ACBP|CCK-RP|EP diazepam binding inhibitor, acyl-CoA binding protein protein-coding chr1-988 chr1 6498588 6498832 + 21.8 0.000 intron (NM_198681, intron 1 of 21) intron (NM_198681, intron 1 of 21) -1266 NM_001042663 57449 Hs.284232 NM_020631 ENSG00000171680 PLEKHG5 CMTRIC|DSMA4|GEF720|Syx|Tech pleckstrin homology and RhoGEF domain containing G5 protein-coding chr6-1120 chr6 161038141 161038385 + 21.8 0.000 intron (NM_005922, intron 2 of 26) L2c|LINE|L2 46494 NM_005922 4216 Hs.390428 NM_005922 ENSG00000085511 MAP3K4 MAPKKK4|MEKK 4|MEKK4|MTK1|PRO0412 mitogen-activated protein kinase kinase kinase 4 protein-coding chrX-326 chrX 114924785 114925029 + 21.8 0.000 Intergenic MER4D|LTR|ERV1 92709 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr1-619 chr1 241847803 241848047 + 21.8 0.000 promoter-TSS (NM_006027) promoter-TSS (NM_006027) -266 NM_001319224 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding chr16-731 chr16 65044989 65045233 + 21.8 0.000 intron (NM_001797, intron 2 of 12) intron (NM_001797, intron 2 of 12) 76952 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr21-203 chr21 29351640 29351884 + 21.8 0.000 non-coding (NR_027655, exon 5 of 8) non-coding (NR_027655, exon 5 of 8) -20739 NR_046564 100874322 Hs.326404 NR_046564 BACH1-IT2 - BACH1 intronic transcript 2 ncRNA chr16-833 chr16 58756339 58756583 + 21.8 0.000 Intergenic Intergenic -22145 NM_002080 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding chr10-824 chr10 43595468 43595712 + 21.8 0.000 Intergenic HERV3-int|LTR|ERV1 -10817 NM_001318141 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding chr19-1102 chr19 42250729 42250973 + 21.8 0.000 intron (NM_001312656, intron 1 of 3) intron (NM_001312656, intron 1 of 3) 3048 NM_001308402 2077 Hs.655969 NM_006494 ENSG00000105722 ERF CHYTS|CRS4|PE-2|PE2 ETS2 repressor factor protein-coding chr21-246 chr21 42272683 42272927 + 21.8 0.000 intron (NM_207627, intron 4 of 15) intron (NM_207627, intron 4 of 15) 42791 NM_003226 7033 Hs.82961 NM_003226 ENSG00000160180 TFF3 ITF|P1B|TFI trefoil factor 3 protein-coding chr12-1062 chr12 20547873 20548117 + 21.8 0.000 intron (NM_000921, intron 1 of 15) intron (NM_000921, intron 1 of 15) -23869 NM_001244683 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chr18-84 chr18 60372628 60372872 + 21.8 0.000 promoter-TSS (NM_005912) promoter-TSS (NM_005912) 25 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding chr1-1286 chr1 19438797 19439041 + 21.8 0.000 intron (NM_001206540, intron 1 of 9) intron (NM_001206540, intron 1 of 9) 45376 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding chr2-321 chr2 105396870 105397114 + 21.8 0.000 intron (NM_001039492, intron 1 of 6) intron (NM_001039492, intron 1 of 6) 2059 NM_001318896 2274 Hs.443687 NM_001450 ENSG00000115641 FHL2 AAG11|DRAL|FHL-2|SLIM-3|SLIM3 four and a half LIM domains 2 protein-coding chr6-135 chr6 4974065 4974309 + 21.8 0.000 Intergenic Intergenic -29629 NR_126017 100129461 Hs.131700 NR_126015 ENSG00000272142 LYRM4-AS1 - LYRM4 antisense RNA 1 ncRNA chr2-943 chr2 54482953 54483197 + 21.8 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) 26748 NM_003128 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding chr8-66 chr8 27774354 27774598 + 21.8 0.000 promoter-TSS (NM_001017420) promoter-TSS (NM_001017420) -78 NM_001017420 157570 Hs.99480 NM_001017420 ENSG00000171320 ESCO2 2410004I17Rik|EFO2|EFO2p|RBS|hEFO2 establishment of sister chromatid cohesion N-acetyltransferase 2 protein-coding chr19-819 chr19 40279094 40279338 + 21.8 0.000 intron (NM_001626, intron 1 of 13) intron (NM_001626, intron 1 of 13) 3425 NR_030371 693226 NR_030371 ENSG00000207631 MIR641 MIRN641|hsa-mir-641|mir-641 microRNA 641 ncRNA chr4-751 chr4 142351296 142351540 + 21.8 0.000 intron (NM_001331040, intron 7 of 25) LTR50|LTR|ERVL 495117 NM_001331040 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding chr5-854 chr5 180644651 180644895 + 21.8 0.000 intron (NM_002020, intron 1 of 29) intron (NM_002020, intron 1 of 29) 4827 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr8-851 chr8 38088169 38088413 + 21.8 0.000 Intergenic HERV1_I-int|LTR|ERV1 -17202 NM_001282272 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr16-659 chr16 68064943 68065187 + 21.8 0.000 intron (NM_017803, intron 8 of 16) intron (NM_017803, intron 8 of 16) -20305 NM_004555 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr14-791 chr14 102593730 102593974 + 21.8 0.000 intron (NM_015156, intron 2 of 11) intron (NM_015156, intron 2 of 11) 1203 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr17-1253 chr17 16486378 16486622 + 21.8 0.000 intron (NM_207387, intron 1 of 2) intron (NM_207387, intron 1 of 2) 5693 NM_001113567 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr20-522 chr20 3658300 3658544 + 21.8 0.000 TTS (NM_145762) TTS (NM_145762) 4977 NM_145762 64096 Hs.302025 NM_022139 ENSG00000125861 GFRA4 - GDNF family receptor alpha 4 protein-coding chr1-714 chr1 84504632 84504876 + 21.8 0.000 intron (NM_005274, intron 2 of 3) intron (NM_005274, intron 2 of 3) -1632 NM_001310156 100505741 Hs.584956 NM_022354 ENSG00000122432 SPATA1 SP-2|SPAP1 spermatogenesis associated 1 protein-coding chr17-1390 chr17 72339066 72339310 + 21.8 0.000 Intergenic Intergenic -3623 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr11-810 chr11 72686864 72687108 + 21.8 0.000 intron (NR_161388, intron 28 of 29) L2b|LINE|L2 -12564 NM_002599 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr21-170 chr21 34367482 34367726 + 21.8 0.000 intron (NM_172201, intron 1 of 1) intron (NM_172201, intron 1 of 1) 3580 NM_172201 9992 Hs.551521 NM_172201 ENSG00000159197 KCNE2 ATFB4|LQT5|LQT6|MIRP1 potassium voltage-gated channel subfamily E regulatory subunit 2 protein-coding chr1-1229 chr1 232614122 232614366 + 21.8 0.000 Intergenic Intergenic -98636 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding chr7-988 chr7 85695733 85695977 + 21.8 0.000 Intergenic Arthur1B|DNA|hAT-Tip100 274733 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr1-2100 chr1 183712082 183712326 + 21.8 0.000 intron (NM_001297669, intron 2 of 18) intron (NM_001297669, intron 2 of 18) -58888 NM_203454 403314 Hs.97335 NM_203454 ENSG00000173627 APOBEC4 C1orf169 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 protein-coding chr11-1021 chr11 83034108 83034352 + 21.8 0.000 promoter-TSS (NM_001286059) promoter-TSS (NM_001286059) 44 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding chr10-611 chr10 5071524 5071768 + 21.8 0.000 intron (NM_001253908, intron 1 of 8) MER67A|LTR|ERV1 -22768 NM_003739 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding chr12-419 chr12 57611136 57611380 + 21.8 0.000 promoter-TSS (NM_182947) promoter-TSS (NM_182947) -177 NR_046223 115557 Hs.61581 NM_133483 ENSG00000240771 ARHGEF25 GEFT|p63RhoGEF Rho guanine nucleotide exchange factor 25 protein-coding chr5-702 chr5 168654305 168654549 + 21.8 0.000 Intergenic Intergenic -52500 NR_130737 101927969 Hs.661903 NR_130737 LOC101927969 - uncharacterized LOC101927969 ncRNA chr1-2071 chr1 154516043 154516287 + 21.8 0.000 intron (NM_182499, intron 4 of 12) L2|LINE|L2 -13753 NR_135169 126669 Hs.591481 NM_001010846 ENSG00000169291 SHE - Src homology 2 domain containing E protein-coding chr14-392 chr14 20989746 20989990 + 21.8 0.000 promoter-TSS (NM_001029991) promoter-TSS (NM_001029991) -112 NM_001029991 64745 Hs.512693 NM_022734 ENSG00000165792 METTL17 METT11D1 methyltransferase like 17 protein-coding chr1-1578 chr1 203030437 203030681 + 21.8 0.000 intron (NM_001304331, intron 1 of 29) intron (NM_001304331, intron 1 of 29) 4068 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr11-644 chr11 130339329 130339573 + 21.8 0.000 intron (NR_148980, intron 1 of 6) tRNA-Glu-GAG_|tRNA|tRNA 24458 NR_148980 646383 Hs.155288 NM_001039787 ENSG00000175773 ZBTB44-DT - ZBTB44 divergent transcript ncRNA chr9-866 chr9 28069537 28069781 + 21.8 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) -495793 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding KI270589.1-1 KI270589.1 41595 41839 + 21.8 0.000 NA NA NA NA chrX-321 chrX 104156820 104157064 + 21.8 0.000 promoter-TSS (NM_001012755) promoter-TSS (NM_001012755) 67 NM_001012755 401612 Hs.660022 NM_001012755 ENSG00000269743 SLC25A53 MCART6 solute carrier family 25 member 53 protein-coding chr2-1710 chr2 61135095 61135339 + 21.8 0.000 intron (NM_001330435, intron 21 of 21) intron (NM_001330435, intron 21 of 21) 9758 NR_036496 339803 Hs.252433 NR_036496 ENSG00000212978 LOC339803 - uncharacterized LOC339803 ncRNA chr11-539 chr11 126318425 126318669 + 21.8 0.000 intron (NM_014026, intron 2 of 5) intron (NM_014026, intron 2 of 5) 14487 NM_014026 28960 Hs.504249 NM_014026 ENSG00000110063 DCPS ARS|DCS1|HINT-5|HINT5|HSL1|HSPC015 decapping enzyme, scavenger protein-coding chr13-251 chr13 71227281 71227525 + 21.8 0.000 Intergenic L2|LINE|L2 212262 NR_047699 100885781 Hs.372660 NR_047699 ENSG00000226846 LINC00348 - long intergenic non-protein coding RNA 348 ncRNA chr19-535 chr19 4375691 4375935 + 21.8 0.000 intron (NM_003025, intron 1 of 9) intron (NM_003025, intron 1 of 9) 24734 NM_001199943 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr8-276 chr8 143340562 143340806 + 21.8 0.000 intron (NM_001258447, intron 1 of 13) intron (NM_001258447, intron 1 of 13) -5804 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr6-1006 chr6 71294238 71294482 + 21.8 0.000 intron (NM_001324266, intron 3 of 6) intron (NM_001324266, intron 3 of 6) 5549 NM_001324266 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding chr12-1194 chr12 101936287 101936531 + 21.8 0.000 Intergenic Intergenic 58829 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr5-941 chr5 158456822 158457066 + 21.8 0.000 Intergenic Intergenic -47171 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr18-287 chr18 68316826 68317070 + 21.8 0.000 Intergenic Intergenic 398160 NM_019022 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr3-1338 chr3 69182544 69182788 + 21.8 0.000 exon (NM_015123, exon 20 of 23) exon (NM_015123, exon 20 of 23) -60071 NM_001304418 56203 Hs.350621 NM_198271 ENSG00000163380 LMOD3 NEM10 leiomodin 3 protein-coding chr1-1458 chr1 244778399 244778643 + 21.8 0.000 Intergenic Intergenic -56785 NM_001312871 116228 Hs.411490 NM_198076 ENSG00000203667 COX20 FAM36A cytochrome c oxidase assembly factor COX20 protein-coding chr7-1158 chr7 143229227 143229471 + 21.8 0.000 intron (NM_001130026, intron 8 of 10) intron (NM_001130026, intron 8 of 10) 7312 NM_176882 259286 Hs.352241 NM_176882 ENSG00000221937 TAS2R40 GPR60|T2R40|T2R58 taste 2 receptor member 40 protein-coding chr3-432 chr3 195954496 195954740 + 21.8 0.000 Intergenic CpG 35661 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr7-599 chr7 129772023 129772267 + 21.8 0.000 Intergenic Intergenic -1653 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA chr16-906 chr16 726110 726354 + 21.8 0.000 promoter-TSS (NM_001323636) promoter-TSS (NM_001323636) 211 NM_001031737 124093 Hs.381943 NM_173476 ENSG00000162004 CCDC78 C16orf25|CNM4|JFP10|hsCCDC78 coiled-coil domain containing 78 protein-coding chr17-1381 chr17 67339246 67339490 + 21.8 0.000 3' UTR (NM_001316341, exon 13 of 13) 3' UTR (NM_001316341, exon 13 of 13) 27209 NM_001316341 5718 Hs.4295 NM_002816 ENSG00000197170 PSMD12 Rpn5|STISS|p55 proteasome 26S subunit, non-ATPase 12 protein-coding chr1-1215 chr1 201481628 201481872 + 21.8 0.000 Intergenic Intergenic -12562 NM_012396 23612 Hs.153944 NM_012396 ENSG00000174307 PHLDA3 TIH1 pleckstrin homology like domain family A member 3 protein-coding chr1-2504 chr1 151166804 151167048 + 21.8 0.000 intron (NM_024041, intron 2 of 6) intron (NM_024041, intron 2 of 6) 782 NM_001204856 79005 Hs.732060 NM_024041 ENSG00000163156 SCNM1 - sodium channel modifier 1 protein-coding chr2-1799 chr2 113705928 113706172 + 21.8 0.000 TTS (NM_001330314) TTS (NM_001330314) 15318 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA chr12-661 chr12 64170050 64170294 + 21.8 0.000 Intergenic Intergenic 52124 NM_001300941 144577 Hs.444671 NM_152440 ENSG00000174206 C12orf66 - chromosome 12 open reading frame 66 protein-coding chr10-1276 chr10 107411243 107411487 + 21.8 0.000 Intergenic Intergenic -246659 NM_001206570 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding chr9-753 chr9 137215273 137215517 + 21.8 0.000 intron (NM_001144028, intron 9 of 13) intron (NM_001144028, intron 9 of 13) 5928 NM_031297 727800 Hs.512767 NM_031297 ENSG00000212864 RNF208 - ring finger protein 208 protein-coding chr1-886 chr1 183471482 183471726 + 21.8 0.000 promoter-TSS (NM_001350221) promoter-TSS (NM_001350221) 378 NR_040063 284649 Hs.127384 NR_040063 ENSG00000232860 SMG7-AS1 DKFZP564C196 SMG7 antisense RNA 1 ncRNA chr9-884 chr9 36102446 36102690 + 21.8 0.000 intron (NM_021111, intron 12 of 20) intron (NM_021111, intron 12 of 20) -33968 NR_104639 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr5-611 chr5 139390999 139391243 + 21.8 0.000 3' UTR (NM_001161546, exon 1 of 1) 3' UTR (NM_001161546, exon 1 of 1) -1208 NM_016459 51237 Hs.409563 NM_016459 ENSG00000170476 MZB1 MEDA-7|PACAP|pERp1 marginal zone B and B1 cell specific protein protein-coding chr6-314 chr6 53544826 53545070 + 21.8 0.000 5' UTR (NM_001197115, exon 1 of 15) 5' UTR (NM_001197115, exon 1 of 15) 153 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding chr6-783 chr6 18596299 18596543 + 21.8 0.000 intron (NR_149116, intron 4 of 7) intron (NR_149116, intron 4 of 7) 24637 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA chr2-677 chr2 70293605 70293849 + 21.8 0.000 promoter-TSS (NM_001317171) promoter-TSS (NM_001317171) 13 NM_003096 6637 Hs.465167 NM_003096 ENSG00000143977 SNRPG SMG|Sm-G small nuclear ribonucleoprotein polypeptide G protein-coding chr8-879 chr8 56907141 56907385 + 21.8 0.000 Intergenic Intergenic 86604 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr9-1305 chr9 119730397 119730641 + 21.8 0.000 Intergenic Intergenic -204541 NR_132393 106146149 Hs.638938 NR_132393 ENSG00000261432 LINC01613 n341773 long intergenic non-protein coding RNA 1613 ncRNA chr3-627 chr3 172103729 172103973 + 21.8 0.000 intron (NM_001135095, intron 1 of 25) intron (NM_001135095, intron 1 of 25) 63320 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr11-518 chr11 69643176 69643420 + 21.8 0.000 intron (NM_053056, intron 2 of 4) CpG-4621 2193 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chr5-398 chr5 157743437 157743681 + 21.8 0.000 promoter-TSS (NM_173491) promoter-TSS (NM_173491) -153 NM_173491 134353 Hs.23648 NM_173491 ENSG00000155858 LSM11 - LSM11, U7 small nuclear RNA associated protein-coding chr2-733 chr2 26175878 26176122 + 21.8 0.000 intron (NM_001168241, intron 1 of 5) intron (NM_001168241, intron 1 of 5) 2912 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr9-1331 chr9 127268080 127268324 + 21.8 0.000 intron (NR_104591, intron 1 of 26) intron (NR_104591, intron 1 of 26) 3428 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr22-250 chr22 41688693 41688937 + 21.8 0.000 promoter-TSS (NM_005008) promoter-TSS (NM_005008) 52 NM_001003796 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chr6-274 chr6 28281451 28281695 + 21.8 0.000 promoter-TSS (NM_001184743) promoter-TSS (NM_001184743) 36 NM_001184743 84547 Hs.144527 NM_032507 ENSG00000137338 PGBD1 HUCEP-4|SCAND4|dJ874C20.4 piggyBac transposable element derived 1 protein-coding chr12-889 chr12 106288529 106288773 + 21.8 0.000 Intergenic MER44B|DNA|TcMar-Tigger -14082 NM_001286262 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr22-147 chr22 47176508 47176752 + 21.8 0.000 TTS (NM_014346) TTS (NM_014346) -168941 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr1-2455 chr1 95404356 95404600 + 21.8 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -52371 NR_146486 101928169 NR_146486 LINC01650 - long intergenic non-protein coding RNA 1650 ncRNA chr6-720 chr6 116087409 116087653 + 21.8 0.000 Intergenic Charlie17a|DNA|hAT-Charlie -13322 NM_152729 221294 Hs.520341 NM_152729 ENSG00000178425 NT5DC1 C6orf200|LP2642|NT5C2L1 5'-nucleotidase domain containing 1 protein-coding chr10-1078 chr10 3048602 3048846 + 21.8 0.000 Intergenic Intergenic 18209 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr6-856 chr6 137892430 137892674 + 21.8 0.000 Intergenic Intergenic -24319 NR_049793 100130476 Hs.598050 NR_049793 ENSG00000237499 WAKMAR2 lnc-TNFAIP3 wound and keratinocyte migration associated lncRNA 2 ncRNA chr12-423 chr12 69265934 69266178 + 21.8 0.000 intron (NM_007007, intron 9 of 9) A-rich|Low_complexity|Low_complexity 7162 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA chr1-367 chr1 206635587 206635831 + 21.8 0.000 exon (NM_003582, exon 1 of 3) exon (NM_003582, exon 1 of 3) 173 NM_001004023 8444 Hs.164267 NM_003582 ENSG00000143479 DYRK3 DYRK5|RED|REDK|hYAK3-2 dual specificity tyrosine phosphorylation regulated kinase 3 protein-coding chr8-622 chr8 36901426 36901670 + 21.8 0.000 intron (NM_001031836, intron 19 of 26) intron (NM_001031836, intron 19 of 26) 117174 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr4-775 chr4 184408116 184408360 + 21.8 0.000 exon (NM_002199, exon 6 of 9) exon (NM_002199, exon 6 of 9) -25932 NR_125934 102723766 Hs.432281 NR_125933 ENSG00000249096 LINC02362 - long intergenic non-protein coding RNA 2362 ncRNA chr13-210 chr13 45325785 45326029 + 21.8 0.000 Intergenic MLT1H|LTR|ERVL-MaLR 10540 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA chr1-2543 chr1 162636328 162636572 + 21.8 0.000 intron (NM_006182, intron 1 of 17) intron (NM_006182, intron 1 of 17) 3986 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr7-1225 chr7 14341896 14342140 + 21.8 0.000 intron (NM_001350717, intron 21 of 24) intron (NM_001350717, intron 21 of 24) -350593 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr6-999 chr6 53581184 53581428 + 21.8 0.000 Intergenic L1MEh|LINE|L1 -8031 NR_110840 101927136 Hs.509788 NR_110840 ENSG00000231683 LOC101927136 - uncharacterized LOC101927136 ncRNA chr8-495 chr8 53843211 53843455 + 21.8 0.000 promoter-TSS (NM_015941) promoter-TSS (NM_015941) -22 NM_213619 51606 Hs.491737 NM_015941 ENSG00000047249 ATP6V1H CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13 ATPase H+ transporting V1 subunit H protein-coding chrX-158 chrX 51893288 51893532 + 21.8 0.000 promoter-TSS (NM_001005333) promoter-TSS (NM_001005333) -213 NM_006986 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr10-861 chr10 75233811 75234055 + 21.8 0.000 3' UTR (NM_144589, exon 7 of 7) 3' UTR (NM_144589, exon 7 of 7) 2024 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr10-1346 chr10 133097292 133097536 + 21.8 0.000 intron (NM_001083909, intron 3 of 6) intron (NM_001083909, intron 3 of 6) -4832 NM_001291085 84435 Hs.435183 NM_032422 ENSG00000197177 ADGRA1 GPR123 adhesion G protein-coupled receptor A1 protein-coding chr2-1000 chr2 172285228 172285472 + 21.8 0.000 Intergenic Intergenic -141986 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr4-194 chr4 1765853 1766097 + 21.8 0.000 Intergenic Intergenic -27318 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr1-519 chr1 228150408 228150652 + 21.8 0.000 intron (NM_020435, intron 1 of 1) intron (NM_020435, intron 1 of 1) 600 NM_020435 57165 Hs.100072 NM_020435 ENSG00000198835 GJC2 CX46.6|Cx47|GJA12|HLD2|LMPH1C|LMPHM3|PMLDAR|SPG44 gap junction protein gamma 2 protein-coding chr16-489 chr16 70664113 70664357 + 21.8 0.000 exon (NM_138383, exon 15 of 15) exon (NM_138383, exon 15 of 15) 21818 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr1-757 chr1 27961314 27961558 + 21.8 0.000 intron (NM_018053, intron 1 of 2) intron (NM_018053, intron 1 of 2) 1974 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr1-963 chr1 201882756 201883000 + 21.8 0.000 3' UTR (NM_018085, exon 24 of 24) 3' UTR (NM_018085, exon 24 of 24) -5791 NR_030775 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr1-1436 chr1 211331332 211331576 + 21.6 0.000 intron (NM_001319207, intron 1 of 10) MIRb|SINE|MIR 4621 NM_001033910 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr12-206 chr12 47705859 47706103 + 21.6 0.000 promoter-TSS (NM_001146075) promoter-TSS (NM_001146075) 49 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding chr9-159 chr9 128421221 128421465 + 21.6 0.000 intron (NM_016174, intron 1 of 12) intron (NM_016174, intron 1 of 12) 486 NM_016174 51148 Hs.495230 NM_016174 ENSG00000167123 CERCAM CEECAM1|GLT25D3 cerebral endothelial cell adhesion molecule protein-coding chr15-495 chr15 65832912 65833156 + 21.6 0.000 Intergenic Intergenic -36457 NM_001206836 8766 Hs.321541 NM_004663 ENSG00000103769 RAB11A YL8 RAB11A, member RAS oncogene family protein-coding chr3-826 chr3 29335543 29335787 + 21.6 0.000 intron (NM_001003792, intron 1 of 13) intron (NM_001003792, intron 1 of 13) 54353 NM_014483 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding chr7-346 chr7 66995328 66995572 + 21.6 0.000 5' UTR (NM_016038, exon 1 of 5) 5' UTR (NM_016038, exon 1 of 5) 136 NM_016038 51119 Hs.110445 NM_016038 ENSG00000126524 SBDS CGI-97|SDS|SWDS SBDS ribosome maturation factor protein-coding chr3-618 chr3 140117018 140117262 + 21.6 0.000 intron (NM_022131, intron 1 of 16) intron (NM_022131, intron 1 of 16) 181955 NM_022131 64084 Hs.158529 NM_022131 ENSG00000158258 CLSTN2 ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma calsyntenin 2 protein-coding chr2-1316 chr2 150528841 150529085 + 21.6 0.000 Intergenic Intergenic -41268 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding chr6-1079 chr6 142013359 142013603 + 21.6 0.000 Intergenic L4_A_Mam|LINE|RTE-X 75318 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding chr5-729 chr5 31809162 31809406 + 21.6 0.000 intron (NM_178140, intron 2 of 24) intron (NM_178140, intron 2 of 24) 126875 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr6-439 chr6 166757807 166758051 + 21.6 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 104596 NM_001006932 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr10-498 chr10 11934257 11934501 + 21.6 0.000 intron (NM_080599, intron 19 of 21) intron (NM_080599, intron 19 of 21) -39669 NR_038222 219731 Hs.576787 NR_038222 ENSG00000225778 PROSER2-AS1 - PROSER2 antisense RNA 1 ncRNA chr19-1446 chr19 2516798 2517042 + 21.6 0.000 intron (NM_052847, intron 4 of 4) intron (NM_052847, intron 4 of 4) 40793 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr1-538 chr1 25819793 25820037 + 21.6 0.000 promoter-TSS (NM_001099627) promoter-TSS (NM_001099627) 9 NM_001099627 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr21-144 chr21 16534070 16534314 + 21.6 0.000 intron (NR_136546, intron 2 of 2) intron (NR_136546, intron 2 of 2) -1380 NR_136547 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA chr12-934 chr12 11718820 11719064 + 21.6 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 69088 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr11-730 chr11 61816108 61816352 + 21.6 0.000 promoter-TSS (NM_001281501) promoter-TSS (NM_001281501) 27 NM_001281501 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr19-709 chr19 47428125 47428369 + 21.6 0.000 3' UTR (NM_015063, exon 10 of 10) 3' UTR (NM_015063, exon 10 of 10) -6014 NM_001346148 56917 Hs.380923 NM_020160 ENSG00000105419 MEIS3 MRG2 Meis homeobox 3 protein-coding chr5-835 chr5 171615358 171615602 + 21.6 0.000 Intergenic Intergenic -170392 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr3-540 chr3 155871373 155871617 + 21.6 0.000 intron (NM_003875, intron 1 of 15) CpG 845 NM_003875 8833 Hs.591314 NM_003875 ENSG00000163655 GMPS GATD7 guanine monophosphate synthase protein-coding chr1-1368 chr1 91586013 91586257 + 21.6 0.000 Intergenic Intergenic 85027 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr9-165 chr9 136438935 136439179 + 21.6 0.000 exon (NM_019892, exon 1 of 10) exon (NM_019892, exon 1 of 10) 788 NM_019892 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr2-893 chr2 12951414 12951658 + 21.6 0.000 Intergenic Intergenic 55477 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA chr3-1035 chr3 150348677 150348921 + 21.6 0.000 Intergenic Intergenic -25052 NR_110187 101928022 Hs.555199 NR_110186 LINC01214 - long intergenic non-protein coding RNA 1214 ncRNA chr14-614 chr14 39426646 39426890 + 21.6 0.000 intron (NM_203301, intron 1 of 3) L2a|LINE|L2 5732 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr5-1115 chr5 134088281 134088525 + 21.6 0.000 Intergenic Intergenic -26278 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr1-727 chr1 162710349 162710593 + 21.6 0.000 intron (NM_001014796, intron 3 of 18) intron (NM_001014796, intron 3 of 18) 78007 NM_001014796 4921 Hs.275757 NM_006182 ENSG00000162733 DDR2 MIG20a|NTRKR3|TKT|TYRO10|WRCN discoidin domain receptor tyrosine kinase 2 protein-coding chr11-650 chr11 1408500 1408744 + 21.6 0.000 intron (NM_003957, intron 1 of 19) intron (NM_003957, intron 1 of 19) -1848 NM_001282218 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr21-96 chr21 27423171 27423415 + 21.6 0.000 Intergenic Intergenic -299086 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA chr1-2479 chr1 112360459 112360703 + 21.6 0.000 Intergenic Intergenic -35633 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr8-826 chr8 23991413 23991657 + 21.6 0.000 Intergenic Intergenic -136729 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr10-661 chr10 92405017 92405261 + 21.6 0.000 Intergenic L2|LINE|L2 -13522 NR_038243 100507674 Hs.568772 NR_038243 MARK2P9 - microtubule affinity regulating kinase 2 pseudogene 9 pseudo chr16-436 chr16 71895091 71895335 + 21.6 0.000 promoter-TSS (NM_001270977) promoter-TSS (NM_001270977) -280 NM_001270979 9798 Hs.232194 NM_014761 ENSG00000182149 IST1 CHMP8|OLC1 IST1 factor associated with ESCRT-III protein-coding chr17-1029 chr17 68577122 68577366 + 21.6 0.000 intron (NM_017565, intron 1 of 10) intron (NM_017565, intron 1 of 10) -18817 NR_027751 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr7-860 chr7 136637989 136638233 + 21.6 0.000 Intergenic Intergenic -230541 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding chr11-1463 chr11 44138383 44138627 + 21.6 0.000 intron (NM_207122, intron 7 of 13) MER112|DNA|hAT-Charlie 42308 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr17-566 chr17 78315547 78315791 + 21.6 0.000 Intergenic Intergenic -37177 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr12-1014 chr12 124354672 124354916 + 21.6 0.000 intron (NM_001077261, intron 26 of 47) intron (NM_001077261, intron 26 of 47) -17552 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr19-1052 chr19 3556831 3557075 + 21.6 0.000 intron (NM_001287529, intron 1 of 9) intron (NM_001287529, intron 1 of 9) 631 NM_001287529 126321 Hs.656901 NM_021731 ENSG00000161091 MFSD12 C19orf28|PP3501 major facilitator superfamily domain containing 12 protein-coding chr10-560 chr10 126925136 126925380 + 21.6 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 19849 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr13-64 chr13 19633560 19633804 + 21.6 0.000 promoter-TSS (NM_017520) promoter-TSS (NM_017520) 23 NM_017520 54737 Hs.269654 NM_017520 ENSG00000196199 MPHOSPH8 HSMPP8|TWA3|mpp8 M-phase phosphoprotein 8 protein-coding chr1-2474 chr1 110489067 110489311 + 21.6 0.000 non-coding (NR_108042, exon 2 of 2) non-coding (NR_108042, exon 2 of 2) 1069 NR_108042 440602 Hs.708945 NR_108042 ENSG00000235407 CYMP-AS1 - CYMP antisense RNA 1 ncRNA chr13-530 chr13 111252469 111252713 + 21.6 0.000 intron (NM_001330597, intron 8 of 18) intron (NM_001330597, intron 8 of 18) 11417 NM_001354055 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr4-454 chr4 47463390 47463634 + 21.6 0.000 intron (NM_001329668, intron 1 of 4) CpG 190 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr22-578 chr22 37289254 37289498 + 21.6 0.000 intron (NM_013385, intron 1 of 12) ERV3-16A3_I-int|LTR|ERVL 6868 NM_013385 27128 Hs.170944 NM_013385 ENSG00000100055 CYTH4 CYT4|DJ63G5.1|PSCD4|cytohesin-4 cytohesin 4 protein-coding chr13-125 chr13 111153419 111153663 + 21.6 0.000 promoter-TSS (NM_001354054) promoter-TSS (NM_001354054) 36 NR_120398 101060553 Hs.662213 NR_120398 LOC101060553 - uncharacterized LOC101060553 ncRNA chr2-822 chr2 241490391 241490635 + 21.6 0.000 intron (NM_014808, intron 22 of 26) intron (NM_014808, intron 22 of 26) 12608 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr7-654 chr7 108146206 108146450 + 21.6 0.000 Intergenic Intergenic -15967 NM_001318046 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding chr16-250 chr16 1436086 1436330 + 21.6 0.000 intron (NM_001143980, intron 13 of 16) intron (NM_001143980, intron 13 of 16) 7389 NM_001365310 105371045 NM_001365310 ENSG00000284395 LOC105371045 gs104 uncharacterized LOC105371045 protein-coding chr6-375 chr6 11770872 11771116 + 21.6 0.000 intron (NM_001143948, intron 1 of 6) intron (NM_001143948, intron 1 of 6) 8053 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chrX-50 chrX 104166247 104166491 + 21.6 0.000 promoter-TSS (NM_207318) promoter-TSS (NM_207318) -84 NM_207318 139231 Hs.496535 NM_207318 ENSG00000123575 FAM199X CXorf39 family with sequence similarity 199, X-linked protein-coding chr11-696 chr11 882628 882872 + 21.6 0.000 intron (NM_023947, intron 10 of 12) intron (NM_023947, intron 10 of 12) 28060 NM_023947 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr5-792 chr5 136053710 136053954 + 21.6 0.000 intron (NM_000358, intron 8 of 16) intron (NM_000358, intron 8 of 16) 24844 NM_000358 7045 Hs.369397 NM_000358 ENSG00000120708 TGFBI BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1 transforming growth factor beta induced protein-coding chr13-224 chr13 21050396 21050640 + 21.6 0.000 intron (NM_014572, intron 1 of 7) L1ME3A|LINE|L1 11068 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr10-530 chr10 93999540 93999784 + 21.6 0.000 intron (NM_001288989, intron 1 of 32) intron (NM_001288989, intron 1 of 32) 5731 NM_001288989 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding chr19-711 chr19 48326072 48326316 + 21.6 0.000 intron (NM_001313905, intron 1 of 4) intron (NM_001313905, intron 1 of 4) 195 NM_001313905 2014 Hs.9999 NM_001425 ENSG00000142227 EMP3 YMP epithelial membrane protein 3 protein-coding chr6-1033 chr6 97497844 97498088 + 21.6 0.000 intron (NR_110757, intron 1 of 4) intron (NR_110757, intron 1 of 4) 192380 NR_110757 101927314 Hs.520283 NR_110757 ENSG00000271860 LOC101927314 - uncharacterized LOC101927314 ncRNA chr15-318 chr15 40291060 40291304 + 21.6 0.000 exon (NM_001284297, exon 27 of 32) exon (NM_001284297, exon 27 of 32) -8596 NM_001190479 100131244 Hs.711376 NM_001190479 ENSG00000230778 ANKRD63 - ankyrin repeat domain 63 protein-coding chr10-1216 chr10 87082298 87082542 + 21.6 0.000 intron (NM_001318906, intron 1 of 13) intron (NM_001318906, intron 1 of 13) 11667 NM_001318900 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr14-274 chr14 75794642 75794886 + 21.6 0.000 intron (NM_015072, intron 27 of 31) MIRc|SINE|MIR 133518 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding chrX-204 chrX 55160911 55161155 + 21.6 0.000 promoter-TSS (NM_001166703) promoter-TSS (NM_001166703) 69 NM_001166703 90736 Hs.415414 NM_138362 ENSG00000182518 FAM104B CXorf44 family with sequence similarity 104 member B protein-coding chrX-115 chrX 154369050 154369294 + 21.6 0.000 intron (NM_001110556, intron 2 of 47) intron (NM_001110556, intron 2 of 47) 5462 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr12-887 chr12 106246302 106246546 + 21.6 0.000 intron (NM_006825, intron 1 of 1) intron (NM_006825, intron 1 of 1) 1596 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr10-515 chr10 75225515 75225759 + 21.6 0.000 intron (NM_001324090, intron 10 of 11) LTR23|LTR|ERV1 10320 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding chr10-1046 chr10 116326756 116327000 + 21.6 0.000 intron (NM_198515, intron 3 of 8) intron (NM_198515, intron 3 of 8) 2430 NM_198515 374355 Hs.233407 NM_198515 ENSG00000182645 CCDC172 C10orf96 coiled-coil domain containing 172 protein-coding chr17-1113 chr17 16128301 16128545 + 21.6 0.000 intron (NM_001190440, intron 13 of 44) L2c|LINE|L2 24773 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA chr17-452 chr17 50671132 50671376 + 21.6 0.000 intron (NM_003786, intron 17 of 30) AluSz|SINE|Alu 36373 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr17-322 chr17 82772100 82772344 + 21.6 0.000 intron (NM_005993, intron 5 of 38) intron (NM_005993, intron 5 of 38) 20157 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr3-974 chr3 59192455 59192699 + 21.6 0.000 Intergenic Intergenic -142545 NM_001351534 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr1-1240 chr1 1168585 1168829 + 21.6 0.000 promoter-TSS (NR_029957) promoter-TSS (NR_029957) -298 NR_029957 554210 NR_029957 ENSG00000198976 MIR429 MIRN429|hsa-mir-429|mir-429 microRNA 429 ncRNA chr8-623 chr8 37870196 37870440 + 21.6 0.000 intron (NM_001002814, intron 5 of 5) intron (NM_001002814, intron 5 of 5) -20457 NM_018310 55290 Hs.709301 NM_018310 ENSG00000104221 BRF2 BRFU|TFIIIB50 BRF2 RNA polymerase III transcription initiation factor subunit protein-coding chr2-757 chr2 75276517 75276761 + 21.6 0.000 Intergenic Intergenic -77119 NM_001058 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding chr4-619 chr4 140736588 140736832 + 21.6 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 19675 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr17-555 chr17 57881095 57881339 + 21.6 0.000 intron (NM_001271875, intron 2 of 10) intron (NM_001271875, intron 2 of 10) 22172 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr6-727 chr6 132188922 132189166 + 21.6 0.000 Intergenic Intergenic 55066 NR_146223 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr6-493 chr6 15245952 15246196 + 21.6 0.000 promoter-TSS (NM_004973) promoter-TSS (NM_004973) 5 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr17-650 chr17 74007679 74007923 + 21.6 0.000 Intergenic MER5A|DNA|hAT-Charlie -179264 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA chr3-1003 chr3 120767109 120767353 + 21.6 0.000 intron (NM_005513, intron 2 of 4) LTR40a|LTR|ERVL 24487 NM_005513 2960 Hs.445272 NM_005513 ENSG00000153767 GTF2E1 FE|TF2E1|TFIIE-A general transcription factor IIE subunit 1 protein-coding chr7-1056 chr7 152760173 152760417 + 21.6 0.000 intron (NM_001350942, intron 1 of 11) CpG 543 NM_020445 57180 Hs.647117 NM_020445 ENSG00000133627 ACTR3B ARP11|ARP3BETA actin related protein 3B protein-coding chr4-1065 chr4 137267077 137267321 + 21.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger -54400 NR_149105 105377441 Hs.668386 NR_149105 LINC02511 - long intergenic non-protein coding RNA 2511 ncRNA chr1-188 chr1 45303561 45303805 + 21.6 0.000 promoter-TSS (NR_024270) promoter-TSS (NR_024270) -227 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA chr20-168 chr20 48921454 48921698 + 21.6 0.000 promoter-TSS (NM_006420) promoter-TSS (NM_006420) -135 NM_006420 10564 Hs.62578 NM_006420 ENSG00000124198 ARFGEF2 BIG2|PVNH2|dJ1164I10.1 ADP ribosylation factor guanine nucleotide exchange factor 2 protein-coding chr8-927 chr8 100492353 100492597 + 21.6 0.000 Intergenic MIRb|SINE|MIR 67284 NM_001270379 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding chr19-414 chr19 10453027 10453271 + 21.6 0.000 5' UTR (NM_006202, exon 1 of 10) 5' UTR (NM_006202, exon 1 of 10) 217 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr14-705 chr14 53999025 53999269 + 21.6 0.000 Intergenic Intergenic -42256 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr7-445 chr7 2110845 2111089 + 21.6 0.000 intron (NM_001013837, intron 11 of 18) intron (NM_001013837, intron 11 of 18) -21915 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr19-607 chr19 52527077 52527321 + 21.6 0.000 promoter-TSS (NM_001039886) promoter-TSS (NM_001039886) -457 NM_001321425 388558 Hs.729294 NM_001039886 ENSG00000198482 ZNF808 - zinc finger protein 808 protein-coding chr7-864 chr7 140079063 140079307 + 21.6 0.000 Intergenic Intergenic -15464 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr14-612 chr14 36628293 36628537 + 21.6 0.000 Intergenic Intergenic -29153 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr16-883 chr16 87457842 87458086 + 21.6 0.000 intron (NM_015144, intron 2 of 12) intron (NM_015144, intron 2 of 12) 33890 NM_015144 23174 Hs.156231 NM_015144 ENSG00000140948 ZCCHC14 BDG-29|BDG29 zinc finger CCHC-type containing 14 protein-coding chr12-384 chr12 132493621 132493865 + 21.6 0.000 intron (NM_001142641, intron 1 of 16) intron (NM_001142641, intron 1 of 16) 3592 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr5-366 chr5 32709974 32710218 + 21.6 0.000 promoter-TSS (NM_001204376) promoter-TSS (NM_001204376) -541 NM_001204376 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding chr10-973 chr10 12709565 12709809 + 21.6 0.000 intron (NM_001351032, intron 5 of 11) intron (NM_001351032, intron 5 of 11) 15666 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr9-1283 chr9 110241905 110242149 + 21.6 0.000 Intergenic L2a|LINE|L2 14480 NM_001244938 7295 Hs.435136 NM_003329 ENSG00000136810 TXN TRDX|TRX|TRX1 thioredoxin protein-coding chr5-471 chr5 93580605 93580849 + 21.6 0.000 non-coding (NR_109822, exon 1 of 3) non-coding (NR_109822, exon 1 of 3) 593 NR_109824 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr19-726 chr19 4369832 4370076 + 21.6 0.000 intron (NM_003025, intron 1 of 9) intron (NM_003025, intron 1 of 9) 26427 NM_001300862 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding chr11-1332 chr11 72989782 72990026 + 21.6 0.000 intron (NM_014824, intron 5 of 19) intron (NM_014824, intron 5 of 19) 152414 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr1-531 chr1 11273178 11273422 + 21.6 0.000 5' UTR (NM_013319, exon 1 of 2) 5' UTR (NM_013319, exon 1 of 2) 102 NM_001330349 29914 Hs.522933 NM_013319 ENSG00000120942 UBIAD1 SCCD|TERE1 UbiA prenyltransferase domain containing 1 protein-coding chr12-232 chr12 116277775 116278019 + 21.6 0.000 promoter-TSS (NM_015335) promoter-TSS (NM_015335) -711 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr8-602 chr8 22453838 22454082 + 21.6 0.000 intron (NM_005605, intron 1 of 13) Tigger3b|DNA|TcMar-Tigger 12990 NM_001243974 5533 Hs.731683 NM_005605 ENSG00000120910 PPP3CC CALNA3|CNA3|PP2Bgamma protein phosphatase 3 catalytic subunit gamma protein-coding chr6-1126 chr6 166825766 166826010 + 21.6 0.000 intron (NM_001318936, intron 2 of 22) intron (NM_001318936, intron 2 of 22) 36637 NM_001006932 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr18-252 chr18 59249281 59249525 + 21.6 0.000 Intergenic Intergenic 24051 NM_013435 30062 Hs.278957 NM_013435 ENSG00000134438 RAX MCOP3|RX retina and anterior neural fold homeobox protein-coding chr8-627 chr8 42587902 42588146 + 21.6 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -46070 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chr6-489 chr6 11008860 11009104 + 21.6 0.000 intron (NM_017770, intron 2 of 7) intron (NM_017770, intron 2 of 7) -34776 NR_038963 100506409 Hs.43818 NR_038962 ELOVL2-AS1 - ELOVL2 antisense RNA 1 ncRNA chr10-842 chr10 62243485 62243729 + 21.6 0.000 intron (NM_001282941, intron 3 of 4) intron (NM_001282941, intron 3 of 4) 25237 NM_145307 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding chr5-609 chr5 138536634 138536878 + 21.6 0.000 intron (NM_001291975, intron 2 of 11) intron (NM_001291975, intron 2 of 11) 4955 NM_001291974 2107 Hs.483494 NM_004730 ENSG00000120705 ETF1 D5S1995|ERF|ERF1|RF1|SUP45L1|TB3-1 eukaryotic translation termination factor 1 protein-coding chr22-197 chr22 41301406 41301650 + 21.6 0.000 promoter-TSS (NM_017590) promoter-TSS (NM_017590) 3 NM_017590 23264 Hs.592188 NM_017590 ENSG00000100403 ZC3H7B ROXAN1|RoXaN zinc finger CCCH-type containing 7B protein-coding chr10-693 chr10 124728147 124728391 + 21.6 0.000 intron (NM_014661, intron 1 of 4) intron (NM_014661, intron 1 of 4) 16109 NM_014661 9679 Hs.129195 NM_014661 ENSG00000189319 FAM53B KIAA0140|bA12J10.2|smp family with sequence similarity 53 member B protein-coding chr9-1200 chr9 37454384 37454628 + 21.6 0.000 intron (NM_014872, intron 1 of 1) intron (NM_014872, intron 1 of 1) 10944 NM_014872 9925 Hs.161276 NM_014872 ENSG00000168795 ZBTB5 - zinc finger and BTB domain containing 5 protein-coding chr19-835 chr19 50050386 50050630 + 21.6 0.000 promoter-TSS (NR_027257) promoter-TSS (NR_027257) -81 NR_138096 400710 Hs.628968 NR_027257 ENSG00000204666 LOC400710 - uncharacterized LOC400710 ncRNA chr19-1244 chr19 39532319 39532563 + 21.6 0.000 exon (NM_152361, exon 1 of 1) exon (NM_152361, exon 1 of 1) 411 NM_152361 126272 Hs.135181 NM_152361 ENSG00000176401 EID2B EID-2B|EID-3 EP300 interacting inhibitor of differentiation 2B protein-coding chr1-1005 chr1 21334416 21334660 + 21.6 0.000 intron (NM_001113348, intron 1 of 18) intron (NM_001113348, intron 1 of 18) 10966 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr12-610 chr12 5965984 5966228 + 21.6 0.000 intron (NM_000552, intron 47 of 51) intron (NM_000552, intron 47 of 51) -19874 NM_001278597 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding chr6-342 chr6 10374182 10374426 + 21.6 0.000 Intergenic L2|LINE|L2 -30198 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr2-1440 chr2 14756957 14757201 + 21.6 0.000 Intergenic Intergenic 124362 NR_144632 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding chr6-550 chr6 125102954 125103198 + 21.6 0.000 Intergenic MIR|SINE|MIR -50697 NM_003287 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding chr1-532 chr1 15603669 15603913 + 21.6 0.000 Intergenic CpG -13667 NM_032341 84301 Hs.718857 NM_032341 ENSG00000197312 DDI2 - DNA damage inducible 1 homolog 2 protein-coding chr19-1338 chr19 11029310 11029554 + 21.6 0.000 intron (NM_001128845, intron 23 of 32) intron (NM_001128845, intron 23 of 32) 45280 NM_001128846 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr8-922 chr8 97995609 97995853 + 21.5 0.000 intron (NM_002380, intron 7 of 18) intron (NM_002380, intron 7 of 18) 46486 NR_002581 26775 Hs.684855 NR_002581 ENSG00000207067 SNORA72 RNU72|U72 small nucleolar RNA, H/ACA box 72 snoRNA chr18-295 chr18 6876625 6876869 + 21.5 0.000 intron (NM_001010000, intron 9 of 16) intron (NM_001010000, intron 9 of 16) 42262 NM_001010000 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding chr12-1166 chr12 78530387 78530631 + 21.5 0.000 Intergenic Intergenic -170763 NR_135021 105369860 Hs.156898 NR_135021 ENSG00000258220 LINC02424 - long intergenic non-protein coding RNA 2424 ncRNA chr6-524 chr6 56911866 56912110 + 21.5 0.000 intron (NM_001144769, intron 2 of 96) LTR78|LTR|ERV1 42842 NM_001144769 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr6-714 chr6 110232373 110232617 + 21.5 0.000 TTS (NM_015891) TTS (NM_015891) 52068 NM_015891 51362 Hs.428147 NM_015891 ENSG00000168438 CDC40 EHB3|PRP17|PRPF17 cell division cycle 40 protein-coding chr3-497 chr3 149553807 149554051 + 21.5 0.000 intron (NM_001348362, intron 6 of 9) intron (NM_001348362, intron 6 of 9) 79232 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding chr1-660 chr1 165376550 165376794 + 21.5 0.000 Intergenic Intergenic -19957 NM_177398 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr3-384 chr3 4721459 4721703 + 21.5 0.000 intron (NM_001168272, intron 39 of 60) intron (NM_001168272, intron 39 of 60) 30009 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA chr8-424 chr8 142459594 142459838 + 21.5 0.000 intron (NM_001702, intron 1 of 30) intron (NM_001702, intron 1 of 30) 10067 NM_001702 575 Hs.194654 NM_001702 ENSG00000181790 ADGRB1 BAI1|GDAIF adhesion G protein-coupled receptor B1 protein-coding chr2-1161 chr2 224063001 224063245 + 21.5 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -23804 NM_006216 5270 Hs.38449 NM_006216 ENSG00000135919 SERPINE2 GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI serpin family E member 2 protein-coding chr17-626 chr17 47695294 47695538 + 21.5 0.000 5' UTR (NM_014726, exon 1 of 9) 5' UTR (NM_014726, exon 1 of 9) 152 NM_014726 9755 Hs.94790 NM_014726 ENSG00000198933 TBKBP1 ProSAPiP2|SINTBAD TBK1 binding protein 1 protein-coding chr20-631 chr20 53588533 53588777 + 21.5 0.000 Intergenic Intergenic -5558 NM_006526 7764 Hs.155040 NM_006526 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding chr3-591 chr3 72907865 72908109 + 21.5 0.000 intron (NM_001080393, intron 1 of 6) intron (NM_001080393, intron 1 of 6) 19941 NR_138564 727936 Hs.710275 NM_001080393 ENSG00000172986 GXYLT2 GLT8D4 glucoside xylosyltransferase 2 protein-coding chr17-1277 chr17 29461978 29462222 + 21.5 0.000 intron (NM_025142, intron 2 of 17) intron (NM_025142, intron 2 of 17) 71175 NM_025142 57551 Hs.597434 NM_020791 ENSG00000160551 TAOK1 KFC-B|MAP3K16|MARKK|PSK-2|PSK2|TAO1|hKFC-B|hTAOK1 TAO kinase 1 protein-coding chr20-203 chr20 35617550 35617794 + 21.5 0.000 intron (NM_001317931, intron 3 of 11) intron (NM_001317931, intron 3 of 11) 1788 NM_001317931 6676 Hs.123159 NM_003116 ENSG00000061656 SPAG4 CT127|SUN4 sperm associated antigen 4 protein-coding chr17-883 chr17 75189424 75189668 + 21.5 0.000 Intergenic MIR|SINE|MIR -6587 NM_001005849 6613 Hs.380973 NM_006937 ENSG00000188612 SUMO2 HSMT3|SMT3B|SMT3H2|SUMO3|Smt3A small ubiquitin like modifier 2 protein-coding chr12-405 chr12 40105479 40105723 + 21.5 0.000 exon (NM_052885, exon 1 of 10) exon (NM_052885, exon 1 of 10) 480 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding chr17-1229 chr17 7234883 7235127 + 21.5 0.000 promoter-TSS (NM_004422) promoter-TSS (NM_004422) -488 NM_004422 1856 Hs.118640 NM_004422 ENSG00000004975 DVL2 - dishevelled segment polarity protein 2 protein-coding chr6-233 chr6 149093630 149093874 + 21.5 0.000 Intergenic Intergenic -61091 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA chr9-927 chr9 99752839 99753083 + 21.5 0.000 intron (NR_109802, intron 2 of 6) L1ME2z|LINE|L1 66928 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chrX-207 chrX 68693469 68693713 + 21.5 0.000 promoter-TSS (NM_001142504) promoter-TSS (NM_001142504) -48 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr5-576 chr5 38934045 38934289 + 21.5 0.000 3' UTR (NM_001323505, exon 18 of 18) 3' UTR (NM_001323505, exon 18 of 18) 88155 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr16-884 chr16 88332332 88332576 + 21.5 0.000 Intergenic Intergenic -95017 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr3-194 chr3 39867778 39868022 + 21.5 0.000 intron (NM_001284424, intron 1 of 15) L1MA9|LINE|L1 58240 NM_001284425 25924 Hs.594535 NM_015460 ENSG00000170011 MYRIP SLAC2-C|SLAC2C myosin VIIA and Rab interacting protein protein-coding chr22-345 chr22 20702722 20702966 + 21.5 0.000 intron (NR_026815, intron 2 of 7) CpG-18798 1730 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr15-418 chr15 41791125 41791369 + 21.5 0.000 intron (NR_049762, intron 2 of 28) intron (NR_049762, intron 2 of 28) 16763 NM_001265611 23005 Hs.513661 NM_014994 ENSG00000137802 MAPKBP1 JNKBP-1|JNKBP1|NPHP20 mitogen-activated protein kinase binding protein 1 protein-coding chr10-879 chr10 87660001 87660245 + 21.5 0.000 intron (NM_001015880, intron 1 of 12) CpG 245 NM_004670 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding chr5-478 chr5 121961740 121961984 + 21.5 0.000 promoter-TSS (NM_152546) promoter-TSS (NM_152546) -113 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding chrX-503 chrX 99845908 99846152 + 21.5 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 564243 NM_020766 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-732 chr8 28703188 28703432 + 21.5 0.000 intron (NR_073468, intron 1 of 4) intron (NR_073468, intron 1 of 4) 1809 NR_073469 2137 Hs.491354 NM_001440 ENSG00000012232 EXTL3 BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR exostosin like glycosyltransferase 3 protein-coding chr1-1121 chr1 1059027 1059271 + 21.5 0.000 promoter-TSS (NR_148960) promoter-TSS (NR_148960) -585 NR_148960 100288175 Hs.713286 NR_148960 ENSG00000217801 LOC100288175 - uncharacterized LOC100288175 ncRNA chr3-753 chr3 105362378 105362622 + 21.5 0.000 Intergenic Intergenic -4213 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr4-580 chr4 2817604 2817848 + 21.5 0.000 promoter-TSS (NM_001145856) promoter-TSS (NM_001145856) -444 NM_001145856 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr10-820 chr10 37489223 37489467 + 21.5 0.000 Intergenic Intergenic 113586 NM_001190489 100288485 Hs.727092 NM_001190489 ENSG00000256892 MTRNR2L7 HN7 MT-RNR2 like 7 protein-coding chr9-494 chr9 136090823 136091067 + 21.5 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 4344 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr5-491 chr5 139655887 139656131 + 21.5 0.000 intron (NM_001317205, intron 1 of 2) intron (NM_001317205, intron 1 of 2) -3546 NM_001317206 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr2-1976 chr2 236768708 236768952 + 21.5 0.000 Intergenic Intergenic 199005 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding chr3-895 chr3 184332466 184332710 + 21.5 0.000 intron (NM_198244, intron 29 of 29) intron (NM_198244, intron 29 of 29) -3338 NM_001366134 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr12-466 chr12 45284224 45284468 + 21.5 0.000 intron (NM_001204803, intron 2 of 20) MER39B|LTR|ERV1 -8344 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr1-2639 chr1 217631075 217631319 + 21.5 0.000 promoter-TSS (NM_018040) promoter-TSS (NM_018040) -107 NM_001297754 55105 Hs.362343 NM_018040 ENSG00000092978 GPATCH2 CT110|GPATC2|PPP1R30|Pfa1 G-patch domain containing 2 protein-coding chrX-322 chrX 111131659 111131903 + 21.5 0.000 intron (NM_001128172, intron 1 of 14) intron (NM_001128172, intron 1 of 14) 8704 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr12-281 chr12 103957034 103957278 + 21.5 0.000 promoter-TSS (NM_001135570) promoter-TSS (NM_001135570) 59 NM_001135570 728568 Hs.42547 NM_001135570 ENSG00000204954 C12orf73 - chromosome 12 open reading frame 73 protein-coding chr12-484 chr12 111841859 111842103 + 21.5 0.000 promoter-TSS (NR_152608) promoter-TSS (NR_152608) -51 NR_152608 51275 Hs.333120 NR_015404 ENSG00000234608 MAPKAPK5-AS1 C12orf47 MAPKAPK5 antisense RNA 1 ncRNA chr22-315 chr22 20299156 20299400 + 21.5 0.000 Intergenic CpG 20782 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr4-345 chr4 133146591 133146835 + 21.5 0.000 intron (NR_125885, intron 2 of 8) intron (NR_125885, intron 2 of 8) 2403 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr10-334 chr10 97869475 97869719 + 21.5 0.000 3' UTR (NM_001010917, exon 5 of 5) 3' UTR (NM_001010917, exon 5 of 5) 6300 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA chr12-1103 chr12 49767628 49767872 + 21.5 0.000 Intergenic L2c|LINE|L2 25941 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr9-1174 chr9 12680477 12680721 + 21.5 0.000 Intergenic Intergenic -12786 NM_000550 7306 Hs.270279 NM_000550 ENSG00000107165 TYRP1 CAS2|CATB|GP75|OCA3|TRP|TRP1|TYRP|b-PROTEIN tyrosinase related protein 1 protein-coding chr10-1057 chr10 125782943 125783187 + 21.5 0.000 Intergenic Intergenic -7244 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr12-260 chr12 6383865 6384109 + 21.5 0.000 promoter-TSS (NM_002342) promoter-TSS (NM_002342) -175 NM_002342 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr10-867 chr10 79424304 79424548 + 21.5 0.000 intron (NM_153367, intron 2 of 3) L2|LINE|L2 21198 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr17-376 chr17 72392668 72392912 + 21.5 0.000 Intergenic Intergenic 49979 NR_135222 146795 Hs.651743 NR_135222 ENSG00000264026 LINC02003 - long intergenic non-protein coding RNA 2003 ncRNA chr3-925 chr3 11810359 11810603 + 21.5 0.000 intron (NR_135609, intron 8 of 11) intron (NR_135609, intron 8 of 11) 36404 NM_001321294 132001 Hs.475472 NM_138807 ENSG00000144559 TAMM41 C3orf31|RAM41|TAM41 TAM41 mitochondrial translocator assembly and maintenance homolog protein-coding chr2-242 chr2 39124322 39124566 + 21.5 0.000 Intergenic CpG -3981 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding chr10-531 chr10 94193337 94193581 + 21.5 0.000 intron (NM_001165979, intron 3 of 31) intron (NM_001165979, intron 3 of 31) -84665 NR_120616 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr10-888 chr10 95183650 95183894 + 21.5 0.000 Intergenic CpG -10428 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chrX-274 chrX 3518969 3519213 + 21.5 0.000 Intergenic Intergenic 13160 NR_145722 109616969 NR_145722 ENSG00000212214 SNORA48B - small nucleolar RNA, H/ACA box 48B snoRNA chr2-1166 chr2 234502802 234503046 + 21.5 0.000 Intergenic Intergenic -5843 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chrX-427 chrX 21779003 21779247 + 21.5 0.000 Intergenic LTR85c|LTR|Gypsy? -21009 NM_014332 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr2-858 chr2 140990514 140990758 + 21.5 0.000 intron (NM_018557, intron 16 of 90) intron (NM_018557, intron 16 of 90) -403951 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr9-585 chr9 7799692 7799936 + 21.5 0.000 promoter-TSS (NM_001318059) promoter-TSS (NM_001318059) -36 NM_033428 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr1-2083 chr1 160491746 160491990 + 21.5 0.000 intron (NM_001184716, intron 1 of 6) intron (NM_001184716, intron 1 of 6) 31387 NM_001184716 114836 Hs.492348 NM_052931 ENSG00000162739 SLAMF6 CD352|KALI|KALIb|Ly108|NTB-A|NTBA|SF2000 SLAM family member 6 protein-coding chr6-515 chr6 47168287 47168531 + 21.5 0.000 Intergenic Intergenic -126077 NM_153840 266977 Hs.733762 NM_025048 ENSG00000153292 ADGRF1 GPR110|KPG_012|PGR19|hGPCR36 adhesion G protein-coupled receptor F1 protein-coding chr16-496 chr16 88425296 88425540 + 21.5 0.000 Intergenic L2b|LINE|L2 -2053 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr11-1027 chr11 117695251 117695495 + 21.5 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 101843 NM_001367904 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr2-552 chr2 63840698 63840942 + 21.5 0.000 promoter-TSS (NM_001001521) promoter-TSS (NM_001001521) -144 NM_001001521 7360 Hs.516217 NM_006759 ENSG00000169764 UGP2 UDPG|UDPGP|UDPGP2|UGP1|UGPP1|UGPP2|pHC379 UDP-glucose pyrophosphorylase 2 protein-coding chr9-555 chr9 133825750 133825994 + 21.5 0.000 intron (NM_001134398, intron 4 of 29) intron (NM_001134398, intron 4 of 29) -85917 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr2-1305 chr2 127884801 127885045 + 21.5 0.000 promoter-TSS (NM_031445) promoter-TSS (NM_031445) -63 NM_031445 83607 Hs.546449 NM_031445 ENSG00000144233 AMMECR1L - AMMECR1 like protein-coding chr21-91 chr21 33230790 33231034 + 21.5 0.000 intron (NM_207584, intron 1 of 8) CpG 974 NM_207584 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr4-315 chr4 37693484 37693728 + 21.5 0.000 Intergenic Intergenic -7230 NM_001085400 768211 Hs.283378 NM_001085399 ENSG00000181826 RELL1 - RELT like 1 protein-coding chr12-1121 chr12 53569155 53569399 + 21.5 0.000 intron (NR_073163, intron 2 of 12) intron (NR_073163, intron 2 of 12) 55293 NR_046221 100652999 Hs.633602 NR_046221 ENSG00000257550 LOC100652999 - uncharacterized LOC100652999 ncRNA chr19-1457 chr19 3772163 3772407 + 21.5 0.000 promoter-TSS (NM_032753) promoter-TSS (NM_032753) -57 NM_032753 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr8-577 chr8 118415751 118415995 + 21.5 0.000 intron (NM_001349811, intron 3 of 4) intron (NM_001349811, intron 3 of 4) -205128 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA chr2-1613 chr2 11446774 11447018 + 21.5 0.000 intron (NM_001278276, intron 7 of 7) L1M3b|LINE|L1 19265 NM_001278276 1876 Hs.603093 NM_198256 ENSG00000169016 E2F6 E2F-6 E2F transcription factor 6 protein-coding chr10-1134 chr10 35006029 35006273 + 21.5 0.000 Intergenic L2b|LINE|L2 68132 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr5-652 chr5 14171632 14171876 + 21.5 0.000 intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 28412 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding chr14-689 chr14 34453384 34453628 + 21.5 0.000 intron (NM_138288, intron 1 of 1) intron (NM_138288, intron 1 of 1) 8734 NM_138288 171546 Hs.740577 NM_138288 ENSG00000165389 SPTSSA C14orf147|SSSPTA serine palmitoyltransferase small subunit A protein-coding chr4-705 chr4 77146484 77146728 + 21.5 0.000 Intergenic Intergenic -10601 NM_004354 901 Hs.740456 NM_004354 ENSG00000138764 CCNG2 - cyclin G2 protein-coding chr15-517 chr15 77893924 77894168 + 21.5 0.000 Intergenic Intergenic 32800 NR_027024 645752 Hs.546408 NR_027024 LOC645752 - golgin A6 family member A pseudogene pseudo chr2-456 chr2 119255992 119256236 + 21.5 0.000 intron (NM_001008410, intron 4 of 4) intron (NM_001008410, intron 4 of 4) -7043 NR_046721 100874111 Hs.704682 NR_046721 ENSG00000229867 STEAP3-AS1 - STEAP3 antisense RNA 1 ncRNA chr6-185 chr6 154510281 154510525 + 21.5 0.000 promoter-TSS (NM_001368116) promoter-TSS (NM_001368116) -157 NM_001368116 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr1-1043 chr1 75615789 75616033 + 21.5 0.000 5' UTR (NM_001320283, exon 1 of 22) 5' UTR (NM_001320283, exon 1 of 22) 252 NM_001320283 204962 Hs.654821 NM_152697 ENSG00000137968 SLC44A5 CTL5 solute carrier family 44 member 5 protein-coding chr4-628 chr4 172205403 172205647 + 21.5 0.000 intron (NM_001034845, intron 2 of 12) intron (NM_001034845, intron 2 of 12) -391918 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr11-951 chr11 113190385 113190629 + 21.5 0.000 intron (NM_181351, intron 1 of 18) intron (NM_181351, intron 1 of 18) 83394 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr2-745 chr2 54728868 54729112 + 21.5 0.000 intron (NM_001039753, intron 1 of 40) MIRb|SINE|MIR 3978 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr14-118 chr14 52950961 52951205 + 21.5 0.000 promoter-TSS (NM_001135000) promoter-TSS (NM_001135000) 14 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding chr12-401 chr12 25195170 25195414 + 21.5 0.000 promoter-TSS (NM_001352061) promoter-TSS (NM_001352061) 55 NM_001001660 144363 Hs.209151 NM_001001660 ENSG00000205707 ETFRF1 LYRM5 electron transfer flavoprotein regulatory factor 1 protein-coding chr10-1037 chr10 103446254 103446498 + 21.5 0.000 TTS (NR_024552) TTS (NR_024552) 5994 NR_046344 51063 Hs.241545 NM_015916 ENSG00000138172 CALHM2 FAM26B calcium homeostasis modulator family member 2 protein-coding chr19-716 chr19 52857459 52857703 + 21.5 0.000 promoter-TSS (NR_102300) promoter-TSS (NR_102300) 38 NR_102301 90333 Hs.467223 NM_199132 ENSG00000204604 ZNF468 - zinc finger protein 468 protein-coding chr12-860 chr12 76784765 76785009 + 21.5 0.000 intron (NM_015336, intron 1 of 16) HSMAR2|DNA|TcMar-Mariner 20629 NM_001359626 23390 Hs.4014 NM_015336 ENSG00000186908 ZDHHC17 DHHC-17|HIP14|HIP3|HSPC294|HYPH zinc finger DHHC-type containing 17 protein-coding chr3-1257 chr3 43291572 43291816 + 21.5 0.000 intron (NM_001330750, intron 1 of 4) intron (NM_001330750, intron 1 of 4) 5154 NM_017719 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr6-379 chr6 21163548 21163792 + 21.5 0.000 intron (NM_017774, intron 13 of 15) AluSq2|SINE|Alu 348222 NR_103790 100874531 Hs.112750 NR_103790 ENSG00000280989 LINC00581 linc-MBOAT1-4 long intergenic non-protein coding RNA 581 ncRNA chr2-1790 chr2 110876378 110876622 + 21.5 0.000 intron (NM_001371254, intron 10 of 18) intron (NM_001371254, intron 10 of 18) 143927 NM_001371254 chr16-386 chr16 11621923 11622167 + 21.5 0.000 Intergenic MER102c|DNA|hAT-Charlie -34579 NR_024320 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr5-459 chr5 54180606 54180850 + 21.5 0.000 intron (NM_019087, intron 1 of 4) intron (NM_019087, intron 1 of 4) 129845 NM_019087 54622 Hs.659125 NM_019087 ENSG00000185305 ARL15 ARFRP2 ADP ribosylation factor like GTPase 15 protein-coding chr15-591 chr15 77568989 77569233 + 21.5 0.000 Intergenic Intergenic 43516 NR_135692 101929457 Hs.637111 NR_135692 ENSG00000259362 LOC101929457 - uncharacterized LOC101929457 ncRNA chr6-54 chr6 116668692 116668936 + 21.5 0.000 promoter-TSS (NM_001361191) promoter-TSS (NM_001361191) -4 NR_154587 221302 Hs.29857 NM_145062 ENSG00000153975 ZUP1 C6orf113|DUB|ZUFSP zinc finger containing ubiquitin peptidase 1 protein-coding chr2-528 chr2 218217010 218217254 + 21.5 0.000 promoter-TSS (NM_005731) promoter-TSS (NM_005731) -57 NM_152862 10109 Hs.529303 NM_005731 ENSG00000163466 ARPC2 ARC34|PNAS-139|PRO2446|p34-Arc actin related protein 2/3 complex subunit 2 protein-coding chr20-298 chr20 37096065 37096309 + 21.5 0.000 promoter-TSS (NM_183404) promoter-TSS (NM_183404) -190 NM_001323282 5933 Hs.207745 NM_002895 ENSG00000080839 RBL1 CP107|PRB1|p107 RB transcriptional corepressor like 1 protein-coding chr8-912 chr8 93343034 93343278 + 21.3 0.000 Intergenic MIRb|SINE|MIR -176306 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr8-742 chr8 40012755 40012999 + 21.3 0.000 intron (NM_194294, intron 9 of 10) intron (NM_194294, intron 9 of 10) 77922 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr10-1315 chr10 124540333 124540577 + 21.3 0.000 intron (NM_022126, intron 6 of 6) intron (NM_022126, intron 6 of 6) 78632 NM_001318332 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding chr1-371 chr1 231422032 231422276 + 21.3 0.000 5' UTR (NM_022051, exon 1 of 5) 5' UTR (NM_022051, exon 1 of 5) 2890 NM_022051 54583 Hs.444450 NM_022051 ENSG00000135766 EGLN1 C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6 egl-9 family hypoxia inducible factor 1 protein-coding chr5-831 chr5 169296765 169297009 + 21.3 0.000 intron (NM_003062, intron 1 of 35) intron (NM_003062, intron 1 of 35) 4252 NM_003062 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr2-1265 chr2 74534318 74534562 + 21.3 0.000 TTS (NR_135772) TTS (NR_135772) -4734 NM_181575 550 Hs.411480 NM_181575 ENSG00000115307 AUP1 - AUP1 lipid droplet regulating VLDL assembly factor protein-coding chr13-341 chr13 76145678 76145922 + 21.3 0.000 Intergenic MER5B|DNA|hAT-Charlie -210668 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr5-486 chr5 135269911 135270155 + 21.3 0.000 intron (NR_161235, intron 3 of 5) MER131|DNA?|DNA? -21856 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr5-915 chr5 120454560 120454804 + 21.3 0.000 Intergenic Intergenic -9596 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr6-983 chr6 43807644 43807888 + 21.3 0.000 Intergenic Intergenic 35798 NM_001287044 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr7-1220 chr7 8582738 8582982 + 21.3 0.000 intron (NM_152745, intron 2 of 2) MER52A|LTR|ERV1 149251 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr4-774 chr4 183264792 183265036 + 21.3 0.000 intron (NM_024949, intron 11 of 22) intron (NM_024949, intron 11 of 22) -24280 NR_126473 101928734 Hs.570713 NR_126473 ENSG00000251128 WWC2-AS1 - WWC2 antisense RNA 1 ncRNA chr5-622 chr5 150299102 150299346 + 21.3 0.000 intron (NM_001012301, intron 1 of 1) L2c|LINE|L2 3681 NM_001012301 340075 Hs.591252 NM_001012301 ENSG00000183876 ARSI ASI|SPG66 arylsulfatase family member I protein-coding chr17-712 chr17 80107328 80107572 + 21.3 0.000 intron (NM_001079804, intron 3 of 19) intron (NM_001079804, intron 3 of 19) 5869 NM_001079804 2548 Hs.1437 NM_000152 ENSG00000171298 GAA LYAG glucosidase alpha, acid protein-coding chr11-1107 chr11 57514201 57514445 + 21.3 0.000 intron (NM_003627, intron 1 of 14) CpG 586 NM_001198810 8501 Hs.591952 NM_003627 ENSG00000149150 SLC43A1 LAT3|PB39|POV1|R00504 solute carrier family 43 member 1 protein-coding chr19-810 chr19 19137778 19138022 + 21.3 0.000 intron (NM_017814, intron 1 of 11) intron (NM_017814, intron 1 of 11) 578 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr17-470 chr17 3660335 3660579 + 21.3 0.000 3' UTR (NM_004937, exon 12 of 12) 3' UTR (NM_004937, exon 12 of 12) 8121 NM_014604 30851 Hs.12956 NM_014604 ENSG00000213977 TAX1BP3 TIP-1|TIP1 Tax1 binding protein 3 protein-coding chrX-181 chrX 108122819 108123063 + 21.3 0.000 intron (NM_001321287, intron 1 of 13) L1M4|LINE|L1 31163 NM_052936 115201 Hs.8763 NM_052936 ENSG00000101844 ATG4A APG4A|AUTL2 autophagy related 4A cysteine peptidase protein-coding chr6-911 chr6 12533745 12533989 + 21.3 0.000 Intergenic Intergenic 51537 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr1-772 chr1 85551153 85551397 + 21.3 0.000 intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 26925 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr3-1189 chr3 188507328 188507572 + 21.3 0.000 intron (NM_001167672, intron 3 of 9) intron (NM_001167672, intron 3 of 9) 61216 NR_046623 100873917 Hs.674993 NR_046623 ENSG00000224563 LPP-AS1 - LPP antisense RNA 1 ncRNA chr9-363 chr9 114386952 114387196 + 21.3 0.000 intron (NM_030767, intron 1 of 21) MIRb|SINE|MIR 908 NM_001317950 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr17-805 chr17 77421591 77421835 + 21.3 0.000 intron (NM_001293696, intron 1 of 9) intron (NM_001293696, intron 1 of 9) 16636 NM_001293696 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr17-618 chr17 41734930 41735174 + 21.3 0.000 promoter-TSS (NM_177977) promoter-TSS (NM_177977) -406 NM_177977 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chrX-224 chrX 133587380 133587624 + 21.3 0.000 intron (NM_001164619, intron 6 of 6) L1MA5A|LINE|L1 -172013 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr12-618 chr12 11556444 11556688 + 21.3 0.000 non-coding (NR_033890, exon 6 of 8) non-coding (NR_033890, exon 6 of 8) 8536 NR_033890 338817 Hs.733066 NR_033890 ENSG00000247157 LINC01252 - long intergenic non-protein coding RNA 1252 ncRNA chr11-855 chr11 8652226 8652470 + 21.3 0.000 intron (NM_014818, intron 1 of 19) intron (NM_014818, intron 1 of 19) 6488 NM_014818 9866 Hs.130836 NM_014818 ENSG00000166436 TRIM66 C11orf29|TIF1D|TIF1DELTA tripartite motif containing 66 protein-coding chr8-551 chr8 23547827 23548071 + 21.3 0.000 intron (NM_001317813, intron 2 of 4) intron (NM_001317813, intron 2 of 4) 18993 NM_001317813 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr13-435 chr13 30690609 30690853 + 21.3 0.000 Intergenic ERV3-16A3_LTR|LTR|ERVL -22747 NM_001204406 241 Hs.507658 NM_001629 ENSG00000132965 ALOX5AP FLAP arachidonate 5-lipoxygenase activating protein protein-coding chr3-721 chr3 47961910 47962154 + 21.3 0.000 intron (NM_002375, intron 3 of 18) MER66C|LTR|ERV1 112477 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr8-152 chr8 22383742 22383986 + 21.3 0.000 intron (NM_001351656, intron 2 of 10) intron (NM_001351656, intron 2 of 10) -8972 NM_001351659 23516 Hs.491232 NM_015359 ENSG00000104635 SLC39A14 HCIN|HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19 solute carrier family 39 member 14 protein-coding chr1-2244 chr1 15407270 15407514 + 21.3 0.000 Intergenic Intergenic -2496 NM_024329 79180 Hs.465374 NM_024329 ENSG00000142634 EFHD2 SWS1 EF-hand domain family member D2 protein-coding chr15-565 chr15 62625103 62625347 + 21.3 0.000 Intergenic Intergenic 19956 NR_026897 197003 Hs.352253 NM_152648 ENSG00000259458 MGC15885 - uncharacterized protein MGC15885 ncRNA chrX-232 chrX 153520082 153520326 + 21.3 0.000 Intergenic Intergenic -15918 NM_021949 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr13-256 chr13 94310557 94310801 + 21.3 0.000 intron (NM_005708, intron 6 of 8) intron (NM_005708, intron 6 of 8) -122688 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr13-257 chr13 95643769 95644013 + 21.3 0.000 intron (NM_014934, intron 1 of 21) CpG 815 NM_198968 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr11-1428 chr11 15976649 15976893 + 21.3 0.000 intron (NM_033326, intron 15 of 15) L2a|LINE|L2 -7150 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chrX-340 chrX 138488134 138488378 + 21.3 0.000 Intergenic Intergenic 179537 NR_030229 574507 NR_030229 ENSG00000207800 MIR504 MIRN504|hsa-mir-504|mir-504 microRNA 504 ncRNA chr1-1542 chr1 145872205 145872449 + 21.3 0.000 exon (NM_001280799, exon 8 of 12) exon (NM_001280799, exon 8 of 12) -13246 NM_006099 10401 Hs.435761 NM_006099 ENSG00000131788 PIAS3 ZMIZ5 protein inhibitor of activated STAT 3 protein-coding chr10-462 chr10 31940918 31941162 + 21.3 0.000 Intergenic AmnSINE1|SINE|5S-Deu-L2 -12164 NM_001270697 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr19-358 chr19 50384250 50384494 + 21.3 0.000 promoter-TSS (NM_002691) promoter-TSS (NM_002691) 25 NM_002691 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr2-323 chr2 135876346 135876590 + 21.3 0.000 promoter-TSS (NM_005915) promoter-TSS (NM_005915) -25 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding chr11-1005 chr11 66255667 66255911 + 21.3 0.000 Intergenic AluSx|SINE|Alu -1505 NM_001134775 64837 Hs.280792 NM_022822 ENSG00000174996 KLC2 - kinesin light chain 2 protein-coding chrX-315 chrX 82573343 82573587 + 21.3 0.000 Intergenic L1M1|LINE|L1 -934825 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding chr5-783 chr5 126811079 126811323 + 21.3 0.000 intron (NR_134488, intron 4 of 11) intron (NR_134488, intron 4 of 11) 34065 NM_001198557 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding chr5-552 chr5 173320254 173320498 + 21.3 0.000 intron (NM_003714, intron 3 of 3) intron (NM_003714, intron 3 of 3) 9127 NM_003714 8614 Hs.233160 NM_003714 ENSG00000113739 STC2 STC-2|STCRP stanniocalcin 2 protein-coding chr10-1327 chr10 126989881 126990125 + 21.3 0.000 intron (NM_001290223, intron 5 of 51) intron (NM_001290223, intron 5 of 51) 84594 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr3-938 chr3 32037602 32037846 + 21.3 0.000 Intergenic L1M6|LINE|L1 -55874 NM_001174060 114884 Hs.150122 NM_017784 ENSG00000144645 OSBPL10 ORP10|OSBP9 oxysterol binding protein like 10 protein-coding chr9-446 chr9 129964924 129965168 + 21.3 0.000 intron (NM_001363755, intron 4 of 15) intron (NM_001363755, intron 4 of 15) 78143 NM_001363755 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding GL000219.1-1 GL000219.1 42437 42681 + 21.3 0.000 NA NA NA NA chr1-1477 chr1 7299303 7299547 + 21.3 0.000 intron (NM_001349608, intron 4 of 21) intron (NM_001349608, intron 4 of 21) 90329 NR_146199 102725193 Hs.666120 NR_146199 ENSG00000237728 LOC102725193 - uncharacterized LOC102725193 ncRNA chr10-422 chr10 79159856 79160100 + 21.3 0.000 intron (NM_020338, intron 3 of 24) intron (NM_020338, intron 3 of 24) 91012 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr1-1037 chr1 63367568 63367812 + 21.3 0.000 promoter-TSS (NM_013339) promoter-TSS (NM_013339) 63 NM_013339 29929 Hs.258501 NM_013339 ENSG00000088035 ALG6 CDG1C ALG6 alpha-1,3-glucosyltransferase protein-coding chr15-407 chr15 98428704 98428948 + 21.3 0.000 Intergenic Intergenic -7828 NR_146567 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA chr21-134 chr21 43740170 43740414 + 21.3 0.000 intron (NM_003681, intron 2 of 10) intron (NM_003681, intron 2 of 10) -1194 NM_001331030 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr16-818 chr16 50208523 50208767 + 21.3 0.000 intron (NM_001365324, intron 1 of 11) intron (NM_001365324, intron 1 of 11) 55164 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding chr6-350 chr6 36735228 36735472 + 21.3 0.000 Intergenic Intergenic 22050 NM_001314019 57699 Hs.372129 NM_020939 ENSG00000124772 CPNE5 COPN5|CPN5 copine 5 protein-coding chr2-204 chr2 70258250 70258494 + 21.3 0.000 intron (NM_016297, intron 1 of 5) CpG 235 NM_016297 51449 Hs.567502 NM_016297 ENSG00000116005 PCYOX1 PCL1 prenylcysteine oxidase 1 protein-coding chr4-210 chr4 80268276 80268520 + 21.3 0.000 5' UTR (NM_001291812, exon 1 of 3) 5' UTR (NM_001291812, exon 1 of 3) 133 NM_001291812 2250 Hs.37055 NM_004464 ENSG00000138675 FGF5 HBGF-5|Smag-82|TCMGLY fibroblast growth factor 5 protein-coding chr4-1115 chr4 183905638 183905882 + 21.3 0.000 5' UTR (NM_020225, exon 1 of 4) 5' UTR (NM_020225, exon 1 of 4) 453 NM_020225 56977 Hs.21958 NM_020225 ENSG00000173320 STOX2 - storkhead box 2 protein-coding chr14-564 chr14 76918393 76918637 + 21.3 0.000 Intergenic Intergenic -41123 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr12-876 chr12 96035091 96035335 + 21.3 0.000 intron (NM_001256644, intron 1 of 17) intron (NM_001256644, intron 1 of 17) 374 NM_000895 4048 Hs.524648 NM_000895 ENSG00000111144 LTA4H - leukotriene A4 hydrolase protein-coding chr13-508 chr13 98571171 98571415 + 21.3 0.000 intron (NM_001032296, intron 1 of 10) intron (NM_001032296, intron 1 of 10) 5858 NM_001032296 8428 Hs.508514 NM_003576 ENSG00000102572 STK24 HEL-S-95|MST3|MST3B|STE20|STK3 serine/threonine kinase 24 protein-coding chr12-479 chr12 98515464 98515708 + 21.3 0.000 promoter-TSS (NM_003276) promoter-TSS (NM_003276) -4 NM_001307975 7112 Hs.11355 NM_003276 ENSG00000120802 TMPO CMD1T|LAP2|LEMD4|PRO0868|TP thymopoietin protein-coding chr5-496 chr5 143243924 143244168 + 21.3 0.000 Intergenic Intergenic 51546 NR_046816 100874372 Hs.666717 NR_046816 ENSG00000230789 ARHGAP26-IT1 - ARHGAP26 intronic transcript 1 ncRNA chr9-536 chr9 114287967 114288211 + 21.3 0.000 intron (NM_032888, intron 41 of 60) intron (NM_032888, intron 41 of 60) -34934 NM_000607 5004 Hs.522356 NM_000607 ENSG00000229314 ORM1 AGP-A|AGP1|HEL-S-153w|ORM orosomucoid 1 protein-coding chr7-661 chr7 137882384 137882628 + 21.3 0.000 exon (NM_194071, exon 11 of 12) exon (NM_194071, exon 11 of 12) -35642 NM_001321708 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr8-806 chr8 17498704 17498948 + 21.3 0.000 intron (NM_001008539, intron 1 of 11) intron (NM_001008539, intron 1 of 11) 1738 NM_001370337 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr12-839 chr12 53659197 53659441 + 21.3 0.000 Intergenic Intergenic 16100 NM_001330269 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr16-331 chr16 1531015 1531259 + 21.3 0.000 intron (NM_001256541, intron 1 of 3) intron (NM_001256541, intron 1 of 3) 2459 NM_001256541 79652 Hs.459652 NM_024600 ENSG00000131634 TMEM204 C16orf30|CLP24 transmembrane protein 204 protein-coding chr3-592 chr3 73727424 73727668 + 21.3 0.000 Intergenic Intergenic -81698 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr12-1057 chr12 14952383 14952627 + 21.3 0.000 intron (NM_001175, intron 1 of 5) intron (NM_001175, intron 1 of 5) -1354 NM_001321422 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr15-339 chr15 83011037 83011281 + 21.3 0.000 intron (NM_001160114, intron 1 of 3) L2c|LINE|L2 480 NM_001160113 123207 Hs.352541 NM_144597 ENSG00000169609 C15orf40 - chromosome 15 open reading frame 40 protein-coding chr15-170 chr15 39771339 39771583 + 21.3 0.000 intron (NM_152597, intron 2 of 11) intron (NM_152597, intron 2 of 11) 11380 NM_152597 161835 Hs.129598 NM_152597 ENSG00000150667 FSIP1 HSD10 fibrous sheath interacting protein 1 protein-coding chr2-602 chr2 43995606 43995850 + 21.3 0.000 intron (NM_133259, intron 1 of 37) CpG 261 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr1-1726 chr1 35532932 35533176 + 21.3 0.000 intron (NM_024874, intron 2 of 20) intron (NM_024874, intron 2 of 20) 24349 NM_024874 79932 Hs.456507 NM_024874 ENSG00000142687 KIAA0319L AAVR|AAVRL KIAA0319 like protein-coding chr9-1008 chr9 134385966 134386210 + 21.3 0.000 intron (NM_001291920, intron 1 of 9) intron (NM_001291920, intron 1 of 9) 6677 NR_039816 100616236 NR_039816 ENSG00000263897 MIR4669 - microRNA 4669 ncRNA chrX-312 chrX 78714833 78715077 + 21.3 0.000 Intergenic L1PA3|LINE|L1 -32754 NM_001278000 2846 Hs.522701 NM_005296 ENSG00000147145 LPAR4 GPR23|LPA4|P2RY9|P2Y5-LIKE|P2Y9 lysophosphatidic acid receptor 4 protein-coding chr11-1206 chr11 113242943 113243187 + 21.3 0.000 intron (NM_001076682, intron 16 of 18) intron (NM_001076682, intron 16 of 18) 30836 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chrX-319 chrX 102720516 102720760 + 21.3 0.000 promoter-TSS (NM_001142526) promoter-TSS (NM_001142526) -105 NM_001142524 80823 Hs.4276 NM_030639 ENSG00000198908 BHLHB9 GASP3|p60TRP basic helix-loop-helix family member b9 protein-coding chr17-431 chr17 83151564 83151808 + 21.3 0.000 Intergenic Intergenic 70540 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr8-1006 chr8 143925635 143925879 + 21.3 0.000 exon (NM_201380, exon 31 of 32) exon (NM_201380, exon 31 of 32) 13840 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr10-789 chr10 12707591 12707835 + 21.3 0.000 intron (NM_001351032, intron 5 of 11) intron (NM_001351032, intron 5 of 11) 17640 NR_031752 100313841 NR_031752 ENSG00000221331 MIR548Q - microRNA 548q ncRNA chr9-783 chr9 80028722 80028966 + 21.3 0.000 intron (NR_121212, intron 3 of 4) intron (NR_121212, intron 3 of 4) 53821 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr5-789 chr5 135355300 135355544 + 21.3 0.000 intron (NM_138610, intron 5 of 8) intron (NM_138610, intron 5 of 8) 43816 NM_001040158 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr2-1212 chr2 27771711 27771955 + 21.3 0.000 intron (NM_145330, intron 1 of 2) CpG 114 NM_004891 9553 Hs.515879 NM_004891 ENSG00000243147 MRPL33 C2orf1|L33mt|MRP-L33|RPL33L mitochondrial ribosomal protein L33 protein-coding chr10-984 chr10 31419674 31419918 + 21.3 0.000 intron (NM_001323646, intron 4 of 11) L2b|LINE|L2 -20041 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr11-1414 chr11 8768707 8768951 + 21.3 0.000 promoter-TSS (NR_120590) promoter-TSS (NR_120590) 51 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr17-625 chr17 45148092 45148336 + 21.3 0.000 5' UTR (NM_006460, exon 1 of 1) 5' UTR (NM_006460, exon 1 of 1) 897 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 HEXIM P-TEFb complex subunit 1 protein-coding chr11-535 chr11 108648318 108648562 + 21.3 0.000 Intergenic L1M1|LINE|L1 -16629 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr9-532 chr9 100411561 100411805 + 21.3 0.000 Intergenic CpG -15530 NM_080655 91283 Hs.530272 NM_080655 ENSG00000066697 MSANTD3 C9orf30|L8 Myb/SANT DNA binding domain containing 3 protein-coding chr8-194 chr8 43093277 43093521 + 21.3 0.000 promoter-TSS (NM_001277971) promoter-TSS (NM_001277971) -107 NM_001277971 84197 Hs.491646 NM_032237 ENSG00000185900 POMK MDDGA12|MDDGC12|SGK196 protein O-mannose kinase protein-coding chr1-2586 chr1 186050460 186050704 + 21.3 0.000 intron (NM_031935, intron 42 of 106) L2|LINE|L2 -245691 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr6-937 chr6 28267050 28267294 + 21.3 0.000 promoter-TSS (NM_001287421) promoter-TSS (NM_001287421) 162 NM_152736 7741 Hs.157883 NM_007151 ENSG00000197062 ZSCAN26 SRE-ZBP|SREZBP|ZNF187 zinc finger and SCAN domain containing 26 protein-coding chr5-1151 chr5 150142995 150143239 + 21.3 0.000 intron (NM_002609, intron 1 of 22) MER44D|DNA|TcMar-Tigger 12728 NM_001355016 5159 Hs.509067 NM_002609 ENSG00000113721 PDGFRB CD140B|IBGC4|IMF1|JTK12|KOGS|PDGFR|PDGFR-1|PDGFR1|PENTT platelet derived growth factor receptor beta protein-coding chr20-559 chr20 25300688 25300932 + 21.3 0.000 3' UTR (NM_001042472, exon 13 of 13) 3' UTR (NM_001042472, exon 13 of 13) 52725 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding chr3-777 chr3 142595645 142595889 + 21.3 0.000 promoter-TSS (NM_001145319) promoter-TSS (NM_001145319) -626 NM_001145319 5357 Hs.203637 NM_002670 ENSG00000120756 PLS1 - plastin 1 protein-coding chr4-93 chr4 49709845 49710089 + 21.3 0.000 Intergenic SAR|Satellite|Satellite 723325 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr1-976 chr1 1295733 1295977 + 21.3 0.000 TTS (NR_106784) TTS (NR_106784) 315 NR_106784 102465434 NR_106784 ENSG00000278073 MIR6726 hsa-mir-6726 microRNA 6726 ncRNA chr12-697 chr12 120971895 120972139 + 21.3 0.000 non-coding (NR_024345, exon 1 of 1) non-coding (NR_024345, exon 1 of 1) 275 NR_024345 283460 Hs.612351 NR_024345 ENSG00000241388 HNF1A-AS1 C12orf27|HAS1|NCRNA00262 HNF1A antisense RNA 1 ncRNA chr1-1719 chr1 32712384 32712628 + 21.3 0.000 Intergenic Intergenic -9736 NM_001161708 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr4-612 chr4 118473960 118474204 + 21.3 0.000 Intergenic MER58A|DNA|hAT-Charlie -42243 NR_003135 645455 Hs.408293 NM_153243 CEP170P1 CEP170L|FAM68B|KIAA0470L centrosomal protein 170 pseudogene 1 pseudo chr14-448 chr14 103074190 103074434 + 21.3 0.000 Intergenic Intergenic -9898 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding KI270722.1-1 KI270722.1 189702 189946 + 21.2 0.000 NA NA NA NA chr14-317 chr14 51680139 51680383 + 21.2 0.000 intron (NM_001267046, intron 1 of 13) intron (NM_001267046, intron 1 of 13) 28351 NM_152330 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr1-1374 chr1 99599695 99599939 + 21.2 0.000 intron (NR_031666, intron 1 of 4) intron (NR_031666, intron 1 of 4) -46296 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding chr11-614 chr11 64876890 64877134 + 21.2 0.000 intron (NM_006795, intron 1 of 4) intron (NM_006795, intron 1 of 4) 1597 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr6-546 chr6 119890639 119890883 + 21.2 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR -124418 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr3-945 chr3 43691396 43691640 + 21.2 0.000 promoter-TSS (NM_001346468) promoter-TSS (NM_001346468) 76 NM_001346468 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr1-1466 chr1 2115058 2115302 + 21.2 0.000 intron (NM_001033582, intron 1 of 14) CpG 10464 NM_001033582 5590 Hs.496255 NM_002744 ENSG00000067606 PRKCZ PKC-ZETA|PKC2 protein kinase C zeta protein-coding chr10-596 chr10 119080194 119080438 + 21.2 0.000 intron (NM_003750, intron 1 of 21) CpG 501 NM_003750 8661 Hs.523299 NM_003750 ENSG00000107581 EIF3A EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 eukaryotic translation initiation factor 3 subunit A protein-coding chr6-899 chr6 7151898 7152142 + 21.2 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 44059 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr2-1368 chr2 212811500 212811744 + 21.2 0.000 intron (NR_131941, intron 2 of 4) intron (NR_131941, intron 2 of 4) 16291 NR_131942 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA chr10-640 chr10 50051987 50052231 + 21.2 0.000 intron (NR_038275, intron 4 of 6) intron (NR_038275, intron 4 of 6) 15694 NR_038275 100421577 Hs.712902 NR_038275 ENSG00000235618 FAM21EP - family with sequence similarity 21, member A pseudogene pseudo chr19-290 chr19 43504059 43504303 + 21.2 0.000 intron (NM_198850, intron 1 of 15) CpG-14620 652 NM_198850 653583 Hs.631581 NM_198850 ENSG00000176531 PHLDB3 - pleckstrin homology like domain family B member 3 protein-coding chr1-2182 chr1 2327871 2328115 + 21.2 0.000 intron (NM_024848, intron 12 of 13) intron (NM_024848, intron 12 of 13) 24668 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr21-230 chr21 32521462 32521706 + 21.2 0.000 Intergenic Intergenic 63939 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr5-866 chr5 10789035 10789279 + 21.2 0.000 Intergenic Intergenic -27923 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr1-1903 chr1 203463892 203464136 + 21.2 0.000 Intergenic Intergenic -11792 NM_201348 5549 Hs.632481 NM_002725 ENSG00000188783 PRELP MST161|MSTP161|SLRR2A proline and arginine rich end leucine rich repeat protein protein-coding chr19-1083 chr19 19105459 19105703 + 21.2 0.000 exon (NM_001321544, exon 5 of 8) exon (NM_001321544, exon 5 of 8) 32897 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr2-2003 chr2 241559927 241560171 + 21.2 0.000 promoter-TSS (NR_033346) promoter-TSS (NR_033346) -906 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr6-653 chr6 8083326 8083570 + 21.2 0.000 intron (NM_004280, intron 3 of 3) intron (NM_004280, intron 3 of 3) 3085 NR_003703 100124533 NR_003703 SCARNA27 - small Cajal body-specific RNA 27 ncRNA chr1-1094 chr1 201829294 201829538 + 21.2 0.000 non-coding (NR_046696, exon 1 of 3) non-coding (NR_046696, exon 1 of 3) 143 NR_046696 100873949 Hs.604842 NR_046696 ENSG00000231871 IPO9-AS1 - IPO9 antisense RNA 1 ncRNA chr7-668 chr7 665432 665676 + 21.2 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 46970 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr18-74 chr18 57621690 57621934 + 21.2 0.000 promoter-TSS (NM_004539) promoter-TSS (NM_004539) 24 NM_004539 4677 Hs.465224 NM_004539 ENSG00000134440 NARS ASNRS|NARS1 asparaginyl-tRNA synthetase protein-coding chr2-661 chr2 234974705 234974949 + 21.2 0.000 intron (NM_001371302, intron 1 of 5) intron (NM_001371302, intron 1 of 5) -3876 NM_001371303 chr3-576 chr3 48472541 48472785 + 21.2 0.000 intron (NM_016479, intron 3 of 5) intron (NM_016479, intron 3 of 5) 495 NM_001272083 51246 Hs.414579 NM_016479 ENSG00000164054 SHISA5 SCOTIN shisa family member 5 protein-coding chr3-352 chr3 141487389 141487633 + 21.2 0.000 intron (NM_006506, intron 1 of 23) CpG 484 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr18-151 chr18 74597433 74597677 + 21.2 0.000 non-coding (NR_024484, exon 1 of 2) non-coding (NR_024484, exon 1 of 2) 280 NR_024484 400657 Hs.61508 NM_001008234 ENSG00000264247 LINC00909 - long intergenic non-protein coding RNA 909 ncRNA chr19-1458 chr19 3904837 3905081 + 21.2 0.000 intron (NM_033064, intron 3 of 12) AluSx|SINE|Alu 24274 NM_033064 85300 Hs.418055 NM_033064 ENSG00000167654 ATCAY BNIP-H|CLAC ATCAY kinesin light chain interacting caytaxin protein-coding chr5-429 chr5 140246256 140246500 + 21.2 0.000 intron (NM_002622, intron 3 of 3) intron (NM_002622, intron 3 of 3) 56723 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding chr8-192 chr8 38044094 38044338 + 21.2 0.000 intron (NM_004095, intron 1 of 2) intron (NM_004095, intron 1 of 2) 13682 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr6-864 chr6 149393196 149393440 + 21.2 0.000 intron (NM_001292034, intron 3 of 6) intron (NM_001292034, intron 3 of 6) -6944 NM_001002255 387082 Hs.657168 NM_001002255 ENSG00000177688 SUMO4 IDDM5|SMT3H4|SUMO-4|dJ281H8.4 small ubiquitin like modifier 4 protein-coding chr1-1177 chr1 86423562 86423806 + 21.2 0.000 promoter-TSS (NM_006536) promoter-TSS (NM_006536) -487 NM_006536 9635 Hs.241551 NM_006536 ENSG00000137975 CLCA2 CACC|CACC3|CLCRG2|CaCC-3 chloride channel accessory 2 protein-coding chr9-656 chr9 73869308 73869552 + 21.2 0.000 Intergenic Intergenic -502101 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA chr15-378 chr15 61950340 61950584 + 21.2 0.000 intron (NM_001018088, intron 40 of 81) intron (NM_001018088, intron 40 of 81) 109985 NM_020821 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding chr6-421 chr6 142361819 142362063 + 21.2 0.000 intron (NM_198569, intron 2 of 24) intron (NM_198569, intron 2 of 24) 59934 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr6-369 chr6 2766191 2766435 + 21.2 0.000 exon (NM_130395, exon 1 of 7) exon (NM_130395, exon 1 of 7) 920 NM_020135 56897 Hs.236828 NM_020135 ENSG00000124535 WRNIP1 WHIP|bA420G6.2 WRN helicase interacting protein 1 protein-coding chr5-125 chr5 177480497 177480741 + 21.2 0.000 Intergenic AluJb|SINE|Alu -6926 NM_004395 1627 Hs.130316 NM_004395 ENSG00000113758 DBN1 D0S117E drebrin 1 protein-coding chr14-362 chr14 52551725 52551969 + 21.2 0.000 promoter-TSS (NM_001099652) promoter-TSS (NM_001099652) 658 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding chr7-183 chr7 79453705 79453949 + 21.2 0.000 promoter-TSS (NM_012301) promoter-TSS (NM_012301) -133 NR_038344 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr5-826 chr5 154194319 154194563 + 21.2 0.000 intron (NM_198321, intron 1 of 11) intron (NM_198321, intron 1 of 11) 3708 NM_198321 55568 Hs.631797 NM_017540 ENSG00000164574 GALNT10 GALNACT10|PPGALNACT10|PPGANTASE10 polypeptide N-acetylgalactosaminyltransferase 10 protein-coding chr4-567 chr4 185165585 185165829 + 21.2 0.000 intron (NM_020827, intron 3 of 4) L1MB4|LINE|L1 22441 NM_001151 291 Hs.246506 NM_001151 ENSG00000151729 SLC25A4 AAC1|ANT|ANT 1|ANT1|MTDPS12|MTDPS12A|PEO2|PEO3|PEOA2|T1 solute carrier family 25 member 4 protein-coding chr5-626 chr5 150699624 150699868 + 21.2 0.000 intron (NM_018047, intron 2 of 10) intron (NM_018047, intron 2 of 10) 1316 NM_018047 55696 Hs.713564 NM_018047 ENSG00000086589 RBM22 Cwc2|ZC3H16|fSAP47 RNA binding motif protein 22 protein-coding chr16-383 chr16 889129 889373 + 21.2 0.000 intron (NR_147885, intron 5 of 11) intron (NR_147885, intron 5 of 11) -31782 NR_110945 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr7-1394 chr7 122166683 122166927 + 21.2 0.000 Intergenic Intergenic -22556 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding chr5-352 chr5 145936605 145936849 + 21.2 0.000 intron (NM_152550, intron 1 of 9) CpG 149 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr16-371 chr16 80900345 80900589 + 21.2 0.000 Intergenic Intergenic -7871 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA chr13-289 chr13 60135300 60135544 + 21.2 0.000 intron (NM_001258369, intron 1 of 26) intron (NM_001258369, intron 1 of 26) -9276 NR_046540 100874196 Hs.662188 NR_046540 ENSG00000223815 DIAPH3-AS2 DIPAH3-AS2 DIAPH3 antisense RNA 2 ncRNA chr9-559 chr9 134294727 134294971 + 21.2 0.000 intron (NR_146518, intron 1 of 1) intron (NR_146518, intron 1 of 1) 548 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr10-985 chr10 33015743 33015987 + 21.2 0.000 Intergenic Intergenic -57635 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr3-1265 chr3 46667275 46667519 + 21.2 0.000 Intergenic Intergenic 26282 NR_135622 259173 Hs.517937 NM_147129 ENSG00000178038 ALS2CL RN49018 ALS2 C-terminal like protein-coding chr3-1044 chr3 159798930 159799174 + 21.2 0.000 intron (NM_001197113, intron 5 of 10) intron (NM_001197113, intron 5 of 10) -30440 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr1-2403 chr1 60762163 60762407 + 21.2 0.000 intron (NR_110628, intron 1 of 5) intron (NR_110628, intron 1 of 5) 63299 NR_110628 101926964 Hs.650459 NR_110628 ENSG00000231252 LOC101926964 - uncharacterized LOC101926964 ncRNA chr10-1146 chr10 44706861 44707105 + 21.2 0.000 Intergenic Intergenic -204333 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr19-223 chr19 3477539 3477783 + 21.2 0.000 intron (NM_001136503, intron 3 of 3) (ATGG)n|Simple_repeat|Simple_repeat 2864 NM_001136503 284422 Hs.130714 NM_001136503 ENSG00000095932 SMIM24 C19orf77|HSPC323|MARDI small integral membrane protein 24 protein-coding chr10-569 chr10 14588339 14588583 + 21.2 0.000 intron (NM_001282695, intron 2 of 5) intron (NM_001282695, intron 2 of 5) 15940 NM_001282696 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr1-1817 chr1 115771765 115772009 + 21.2 0.000 Intergenic Intergenic -3082 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr13-195 chr13 112961496 112961740 + 21.2 0.000 Intergenic Intergenic 7020 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr18-51 chr18 79200618 79200862 + 21.2 0.000 intron (NR_148360, intron 9 of 31) intron (NR_148360, intron 9 of 31) 131346 NR_148360 374868 Hs.465475 NM_198531 ENSG00000166377 ATP9B ATPASEP|ATPIIB|HUSSY-20|NEO1L|hMMR1 ATPase phospholipid transporting 9B (putative) protein-coding chr1-1867 chr1 168880216 168880460 + 21.2 0.000 Intergenic MLT1E1A|LTR|ERVL-MaLR 93397 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA chr2-1252 chr2 69298408 69298652 + 21.2 0.000 Intergenic Intergenic 88697 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr4-1021 chr4 92407311 92407555 + 21.2 0.000 intron (NM_001286838, intron 1 of 14) L1PA16|LINE|L1 103034 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr7-591 chr7 105769985 105770229 + 21.2 0.000 intron (NM_152749, intron 3 of 3) intron (NM_152749, intron 3 of 3) -90945 NM_138495 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr2-1944 chr2 220199106 220199350 + 21.2 0.000 Intergenic Intergenic -292663 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr6-1063 chr6 126748033 126748277 + 21.2 0.000 Intergenic Intergenic 263524 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA chr11-811 chr11 73321853 73322097 + 21.2 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -12614 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chr11-1646 chr11 117817719 117817963 + 21.2 0.000 promoter-TSS (NM_001367905) promoter-TSS (NM_001367905) -327 NM_001367905 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr17-547 chr17 28728615 28728859 + 21.2 0.000 promoter-TSS (NM_178170) promoter-TSS (NM_178170) -51 NM_178170 284086 Hs.448468 NM_178170 ENSG00000160602 NEK8 JCK|NEK12A|NPHP9|RHPD2 NIMA related kinase 8 protein-coding chr19-823 chr19 43701401 43701645 + 21.2 0.000 Intergenic L2a|LINE|L2 -14553 NM_019612 56269 Hs.515444 NM_019612 ENSG00000124449 IRGC CINEMA|IFGGE|IRGC1|Iigp5|R30953_1 immunity related GTPase cinema protein-coding chr6-611 chr6 85459471 85459715 + 21.2 0.000 intron (NM_002526, intron 1 of 8) intron (NM_002526, intron 1 of 8) 9510 NM_002526 4907 Hs.153952 NM_002526 ENSG00000135318 NT5E CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT 5'-nucleotidase ecto protein-coding chr19-717 chr19 53980268 53980512 + 21.2 0.000 intron (NM_031895, intron 3 of 3) intron (NM_031895, intron 3 of 3) -1917 NR_030632 100126325 NR_030632 ENSG00000284583 MIR935 MIRN935|hsa-mir-935|mir-935 microRNA 935 ncRNA chr9-593 chr9 35489382 35489626 + 21.2 0.000 promoter-TSS (NM_001330740) promoter-TSS (NM_001330740) -607 NR_052015 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr9-109 chr9 120868660 120868904 + 21.2 0.000 TTS (NM_001286843) TTS (NM_001286843) 129 NM_001286842 26147 Hs.460124 NM_015651 ENSG00000119403 PHF19 MTF2L1|PCL3|TDRD19B PHD finger protein 19 protein-coding chr6-390 chr6 36386890 36387134 + 21.2 0.000 intron (NM_001207035, intron 1 of 7) intron (NM_001207035, intron 1 of 7) 657 NM_001207035 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr1-2497 chr1 150148906 150149150 + 21.2 0.000 promoter-TSS (NM_001304722) promoter-TSS (NM_001304722) -406 NM_001304722 51177 Hs.438824 NM_016274 ENSG00000023902 PLEKHO1 CKIP-1|CKIP1|JBP|OC120 pleckstrin homology domain containing O1 protein-coding chr2-854 chr2 112690985 112691229 + 21.2 0.000 Intergenic Intergenic -30379 NM_001350494 284958 Hs.589714 NM_001350494 ENSG00000144130 NT5DC4 - 5'-nucleotidase domain containing 4 protein-coding chr13-463 chr13 45334164 45334408 + 21.2 0.000 3' UTR (NM_001286272, exon 6 of 6) 3' UTR (NM_001286272, exon 6 of 6) 2161 NR_145985 109616966 NR_145726 ENSG00000253051 SNORA31B - small nucleolar RNA, H/ACA box 31B snoRNA GL000216.2-3 GL000216.2 140126 140370 + 21.2 0.000 NA NA NA NA chr19-981 chr19 36916414 36916658 + 21.2 0.000 promoter-TSS (NM_001171979) promoter-TSS (NM_001171979) 204 NM_198539 374900 Hs.404220 NM_198539 ENSG00000198453 ZNF568 ZFP568 zinc finger protein 568 protein-coding chr7-859 chr7 134903283 134903527 + 21.2 0.000 intron (NM_033139, intron 1 of 12) L1MC1|LINE|L1 11947 NM_033140 800 Hs.490203 NM_004342 ENSG00000122786 CALD1 CDM|H-CAD|HCAD|L-CAD|LCAD|NAG22 caldesmon 1 protein-coding chr1-1144 chr1 25695898 25696142 + 21.2 0.000 intron (NM_020379, intron 2 of 11) intron (NM_020379, intron 2 of 11) 78552 NM_020379 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr2-1439 chr2 12759447 12759691 + 21.2 0.000 Intergenic Intergenic 22202 NR_036072 100422986 NR_036072 ENSG00000264370 MIR3125 mir-3125 microRNA 3125 ncRNA chr10-197 chr10 16436718 16436962 + 21.2 0.000 promoter-TSS (NM_001001484) promoter-TSS (NM_001001484) -103 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr4-264 chr4 75769063 75769307 + 21.2 0.000 intron (NM_001290049, intron 5 of 25) L2|LINE|L2 44663 NM_001290049 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding chr2-1453 chr2 29130401 29130645 + 21.2 0.000 intron (NM_001287528, intron 2 of 14) intron (NM_001287528, intron 2 of 14) 15108 NM_024692 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr1-1481 chr1 9067339 9067583 + 21.2 0.000 intron (NM_003039, intron 1 of 11) intron (NM_003039, intron 1 of 11) 2174 NM_001328621 6518 Hs.530003 NM_003039 ENSG00000142583 SLC2A5 GLUT-5|GLUT5 solute carrier family 2 member 5 protein-coding chr22-360 chr22 46065030 46065274 + 21.2 0.000 non-coding (NR_148973, exon 2 of 2) non-coding (NR_148973, exon 2 of 2) 5869 NR_148973 642648 Hs.631363 NR_148973 LOC642648 - uncharacterized LOC642648 ncRNA chr12-205 chr12 32106712 32106956 + 21.2 0.000 promoter-TSS (NM_001714) promoter-TSS (NM_001714) -13 NM_001714 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr17-1384 chr17 68054496 68054740 + 21.2 0.000 Intergenic Intergenic 18658 NM_001320611 3838 Hs.594238 NM_002266 ENSG00000182481 KPNA2 IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha karyopherin subunit alpha 2 protein-coding chr2-732 chr2 25361981 25362225 + 21.2 0.000 Intergenic Intergenic -19513 NM_175629 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr7-502 chr7 29865667 29865911 + 21.2 0.000 intron (NM_001080529, intron 2 of 8) intron (NM_001080529, intron 2 of 8) 59235 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding chr12-630 chr12 32437403 32437647 + 21.2 0.000 intron (NM_001370298, intron 1 of 16) intron (NM_001370298, intron 1 of 16) 37967 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr14-256 chr14 50000662 50000906 + 21.2 0.000 non-coding (NR_126500, exon 3 of 3) non-coding (NR_126500, exon 3 of 3) 5735 NR_126496 283551 Hs.292580 NM_001012706 ENSG00000214900 LINC01588 C14orf182 long intergenic non-protein coding RNA 1588 ncRNA chr12-866 chr12 85829501 85829745 + 21.2 0.000 intron (NM_005447, intron 1 of 1) intron (NM_005447, intron 1 of 1) 6786 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr3-1229 chr3 19766524 19766768 + 21.2 0.000 Intergenic Intergenic 167571 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding chr15-582 chr15 74870656 74870900 + 21.2 0.000 intron (NM_001320778, intron 1 of 9) intron (NM_001320778, intron 1 of 9) 2587 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr19-1202 chr19 13721400 13721644 + 21.2 0.000 Intergenic Intergenic -10230 NM_001320561 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr7-197 chr7 105521899 105522143 + 21.2 0.000 intron (NM_019042, intron 1 of 15) CpG 250 NM_001318164 54517 Hs.520619 NM_019042 ENSG00000091127 PUS7 IDDABS pseudouridine synthase 7 protein-coding chr5-547 chr5 138353545 138353789 + 21.2 0.000 intron (NM_016604, intron 1 of 23) intron (NM_016604, intron 1 of 23) 982 NM_016604 51780 Hs.483486 NM_016604 ENSG00000120733 KDM3B 5qNCA|C5orf7|JMJD1B|NET22 lysine demethylase 3B protein-coding chr9-949 chr9 121844009 121844253 + 21.2 0.000 intron (NM_001139442, intron 8 of 8) L1MC2|LINE|L1 101346 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr2-1804 chr2 119684193 119684437 + 21.2 0.000 intron (NR_148341, intron 1 of 16) intron (NR_148341, intron 1 of 16) 5114 NR_148341 80775 Hs.439991 NM_030577 ENSG00000144120 TMEM177 - transmembrane protein 177 protein-coding chr7-1348 chr7 100270879 100271123 + 21.2 0.000 intron (NR_028038, intron 1 of 6) intron (NR_028038, intron 1 of 6) 1204 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr1-546 chr1 47333899 47334143 + 21.0 0.000 non-coding (NR_046394, exon 1 of 5) non-coding (NR_046394, exon 1 of 5) 231 NM_016308 51727 Hs.731647 NM_016308 ENSG00000162368 CMPK1 CK|CMK|CMPK|UMK|UMP-CMPK|UMPK cytidine/uridine monophosphate kinase 1 protein-coding chr1-874 chr1 155051369 155051613 + 21.0 0.000 promoter-TSS (NR_040772) promoter-TSS (NR_040772) 175 NR_048578 8751 Hs.312098 NM_003815 ENSG00000143537 ADAM15 MDC15 ADAM metallopeptidase domain 15 protein-coding chr7-687 chr7 2808106 2808350 + 21.0 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) 7002 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr2-779 chr2 164531849 164532093 + 21.0 0.000 intron (NM_004490, intron 3 of 13) intron (NM_004490, intron 3 of 13) 36524 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr21-221 chr21 25515889 25516133 + 21.0 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -46134 NR_001458 114614 Hs.697120 NR_001458 ENSG00000234883 MIR155HG BIC|MIRHG2|NCRNA00172 MIR155 host gene ncRNA chr1-1883 chr1 183241484 183241728 + 21.0 0.000 TTS (NM_018891) TTS (NM_018891) 55342 NM_018891 3918 Hs.591484 NM_005562 ENSG00000058085 LAMC2 B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2 laminin subunit gamma 2 protein-coding chr9-1070 chr9 40914896 40915140 + 21.0 0.000 Intergenic CER|Satellite|Satellite 14074 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA chr7-1043 chr7 148697478 148697722 + 21.0 0.000 promoter-TSS (NM_001370661) promoter-TSS (NM_001370661) -156 NM_001370660 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr7-1143 chr7 106110146 106110390 + 21.0 0.000 intron (NM_182715, intron 1 of 4) intron (NM_182715, intron 1 of 4) 2044 NM_182715 6856 Hs.80919 NM_006754 ENSG00000008282 SYPL1 H-SP1|SYPL synaptophysin like 1 protein-coding chr9-1093 chr9 100698490 100698734 + 21.0 0.000 Intergenic Intergenic 120533 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding chr5-534 chr5 65198770 65199014 + 21.0 0.000 intron (NR_135689, intron 21 of 25) intron (NR_135689, intron 21 of 25) 283028 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding chr5-215 chr5 140547403 140547647 + 21.0 0.000 promoter-TSS (NM_003732) promoter-TSS (NM_003732) -137 NM_003732 8637 Hs.594084 NM_003732 ENSG00000243056 EIF4EBP3 4E-BP3|4EBP3 eukaryotic translation initiation factor 4E binding protein 3 protein-coding chr1-2200 chr1 6311513 6311757 + 21.0 0.000 intron (NM_181866, intron 6 of 8) intron (NM_181866, intron 6 of 8) 47294 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr9-510 chr9 35792940 35793184 + 21.0 0.000 exon (NM_003995, exon 1 of 22) exon (NM_003995, exon 1 of 22) 653 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr20-585 chr20 35516271 35516515 + 21.0 0.000 3' UTR (NM_007186, exon 35 of 35) 3' UTR (NM_007186, exon 35 of 35) 13259 NM_001145350 140873 Hs.158680 NM_080828 ENSG00000125975 C20orf173 dJ477O4.4 chromosome 20 open reading frame 173 protein-coding chr2-1446 chr2 24702847 24703091 + 21.0 0.000 intron (NM_001362950, intron 11 of 23) intron (NM_001362950, intron 11 of 23) -90146 NM_024322 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr13-468 chr13 48492067 48492311 + 21.0 0.000 intron (NM_001352426, intron 12 of 12) L2a|LINE|L2 40891 NM_001352424 1102 Hs.652712 NM_001268 ENSG00000136161 RCBTB2 CHC1L|RLG RCC1 and BTB domain containing protein 2 protein-coding chr2-665 chr2 10043750 10043994 + 21.0 0.000 promoter-TSS (NR_135558) promoter-TSS (NR_135558) 43 NM_001177716 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr7-327 chr7 99427074 99427318 + 21.0 0.000 intron (NM_001198879, intron 6 of 8) SVA_D|Retroposon|SVA 11602 NM_015545 26024 Hs.632313 NM_015545 ENSG00000106246 PTCD1 - pentatricopeptide repeat domain 1 protein-coding chr11-1096 chr11 46714483 46714727 + 21.0 0.000 Intergenic AluSx1|SINE|Alu -4561 NM_000506 2147 Hs.655207 NM_000506 ENSG00000180210 F2 PT|RPRGL2|THPH1 coagulation factor II, thrombin protein-coding chr4-633 chr4 184648582 184648826 + 21.0 0.000 intron (NM_004346, intron 1 of 7) intron (NM_004346, intron 1 of 7) 743 NM_004346 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr10-1167 chr10 64337777 64338021 + 21.0 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -487629 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo chr20-235 chr20 46363927 46364171 + 21.0 0.000 intron (NM_001281460, intron 1 of 10) CpG 376 NM_001281459 51006 Hs.593344 NM_015945 ENSG00000080189 SLC35C2 BA394O2.1|C20orf5|CGI-15|OVCOV1 solute carrier family 35 member C2 protein-coding chr18-40 chr18 59780049 59780293 + 21.0 0.000 Intergenic Intergenic -82748 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr3-1006 chr3 123546409 123546653 + 21.0 0.000 intron (NM_001329786, intron 2 of 5) intron (NM_001329786, intron 2 of 5) 38086 NM_001329787 201562 Hs.705480 NM_198402 ENSG00000206527 HACD2 PTPLB 3-hydroxyacyl-CoA dehydratase 2 protein-coding chr17-886 chr17 75809209 75809453 + 21.0 0.000 intron (NM_001080419, intron 1 of 15) intron (NM_001080419, intron 1 of 15) 24492 NR_038131 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK UNKEMPT|ZC3H5|ZC3HDC5 unk zinc finger protein-coding chr12-460 chr12 3299904 3300148 + 21.0 0.000 non-coding (NR_148995, exon 10 of 12) non-coding (NR_148995, exon 10 of 12) 66096 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr15-301 chr15 78798334 78798578 + 21.0 0.000 intron (NM_014272, intron 2 of 23) intron (NM_014272, intron 2 of 23) 13008 NM_014272 11173 Hs.16441 NM_014272 ENSG00000136378 ADAMTS7 ADAM-TS 7|ADAM-TS7|ADAMTS-7 ADAM metallopeptidase with thrombospondin type 1 motif 7 protein-coding chr3-780 chr3 143700751 143700995 + 21.0 0.000 intron (NM_173653, intron 4 of 15) L1MA3|LINE|L1 147595 NM_173653 285195 Hs.302257 NM_173653 ENSG00000181804 SLC9A9 AUTS16|NHE9 solute carrier family 9 member A9 protein-coding chr21-55 chr21 32256946 32257190 + 21.0 0.000 Intergenic Intergenic 21981 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr13-364 chr13 110348096 110348340 + 21.0 0.000 intron (NM_001846, intron 3 of 47) intron (NM_001846, intron 3 of 47) 7260 NR_107040 102465872 NR_107040 ENSG00000276765 MIR8073 hsa-mir-8073 microRNA 8073 ncRNA chr3-911 chr3 198028831 198029075 + 21.0 0.000 intron (NR_026786, intron 15 of 16) intron (NR_026786, intron 15 of 16) 10514 NR_046669 100873947 Hs.637166 NR_046669 ENSG00000232832 LMLN-AS1 - LMLN antisense RNA 1 ncRNA chrX-159 chrX 53281471 53281715 + 21.0 0.000 promoter-TSS (NM_015075) promoter-TSS (NM_015075) -9 NM_015075 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr9-259 chr9 131531072 131531316 + 21.0 0.000 promoter-TSS (NM_031432) promoter-TSS (NM_031432) 69 NM_031432 83549 Hs.9597 NM_031432 ENSG00000130717 UCK1 URK1 uridine-cytidine kinase 1 protein-coding chr1-1394 chr1 154220080 154220324 + 21.0 0.000 promoter-TSS (NM_014847) promoter-TSS (NM_014847) 30 NM_001127320 9898 Hs.490551 NM_014847 ENSG00000143569 UBAP2L NICE-4|NICE4 ubiquitin associated protein 2 like protein-coding chr15-541 chr15 101192827 101193071 + 21.0 0.000 intron (NM_014918, intron 2 of 2) intron (NM_014918, intron 2 of 2) 59099 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr6-1032 chr6 96723435 96723679 + 21.0 0.000 Intergenic Intergenic 113920 NM_030784 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding chr10-1055 chr10 125093143 125093387 + 21.0 0.000 intron (NM_001321013, intron 1 of 9) intron (NM_001321013, intron 1 of 9) -60395 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr6-232 chr6 139943441 139943685 + 21.0 0.000 Intergenic Intergenic -32756 NR_121623 100507477 Hs.179213 NR_121622 ENSG00000236013 LOC100507477 - uncharacterized LOC100507477 ncRNA chr7-791 chr7 135977166 135977410 + 21.0 0.000 promoter-TSS (NM_145808) promoter-TSS (NM_145808) 71 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr12-1221 chr12 109888316 109888560 + 21.0 0.000 Intergenic Intergenic -7897 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr14-496 chr14 101965172 101965416 + 21.0 0.000 intron (NM_001376, intron 1 of 77) CpG 721 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr2-1238 chr2 48248636 48248880 + 21.0 0.000 Intergenic Intergenic -65924 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr13-539 chr13 113428230 113428474 + 21.0 0.000 intron (NM_199162, intron 4 of 6) intron (NM_199162, intron 4 of 6) -13959 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr12-775 chr12 121950141 121950385 + 21.0 0.000 intron (NM_001178003, intron 8 of 17) L1MB5|LINE|L1 31671 NM_001178003 144406 Hs.709837 NM_144668 ENSG00000158023 WDR66 CFAP251|CaM-IP4|SPGF33 WD repeat domain 66 protein-coding chr10-882 chr10 89374734 89374978 + 21.0 0.000 Intergenic Intergenic -3200 NM_001010987 439996 Hs.500491 NM_001010987 ENSG00000204010 IFIT1B IFIT1L|bA149I23.6 interferon induced protein with tetratricopeptide repeats 1B protein-coding chr1-1493 chr1 20792426 20792670 + 21.0 0.000 Intergenic Intergenic -5860 NM_016287 50809 Hs.142442 NM_016287 ENSG00000127483 HP1BP3 HP1-BP74|HP1BP74 heterochromatin protein 1 binding protein 3 protein-coding chr1-1587 chr1 225735920 225736164 + 21.0 0.000 Intergenic Intergenic -41771 NM_001130440 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr3-825 chr3 27354990 27355234 + 21.0 0.000 intron (NM_152534, intron 2 of 38) intron (NM_152534, intron 2 of 38) 14271 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr4-293 chr4 74370921 74371165 + 21.0 0.000 intron (NM_001432, intron 1 of 4) MER20|DNA|hAT-Charlie 5898 NM_001432 2069 Hs.115263 NM_001432 ENSG00000124882 EREG EPR|ER|Ep epiregulin protein-coding chr4-446 chr4 1010035 1010279 + 21.0 0.000 Intergenic CpG -1469 NM_001004356 53834 Hs.193326 NM_021923 ENSG00000127418 FGFRL1 FGFR-5|FGFR5|FHFR fibroblast growth factor receptor like 1 protein-coding chr17-1244 chr17 13266715 13266959 + 21.0 0.000 Intergenic Intergenic 39923 NR_146885 105371541 NR_146885 ENSG00000234634 LINC02093 - long intergenic non-protein coding RNA 2093 ncRNA chr15-306 chr15 84992622 84992866 + 21.0 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 10770 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr12-1083 chr12 43983688 43983932 + 21.0 0.000 intron (NM_001286212, intron 3 of 6) MIR|SINE|MIR 147729 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr18-263 chr18 6556199 6556443 + 21.0 0.000 intron (NR_120518, intron 2 of 5) AluSq2|SINE|Alu 44905 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA chr4-586 chr4 10549680 10549924 + 21.0 0.000 intron (NM_052964, intron 8 of 18) intron (NM_052964, intron 8 of 18) -92376 NM_053042 85460 Hs.455089 NM_053042 ENSG00000178163 ZNF518B - zinc finger protein 518B protein-coding chr22-129 chr22 20697581 20697825 + 21.0 0.000 Intergenic Intergenic -3411 NR_026815 84222 Hs.546454 NM_032262 ENSG00000226287 TMEM191A TMEM191AP transmembrane protein 191A (pseudogene) pseudo chr4-698 chr4 57020522 57020766 + 21.0 0.000 intron (NM_001303269, intron 17 of 25) intron (NM_001303269, intron 17 of 25) 41748 NM_000938 5431 Hs.602757 NM_000938 ENSG00000047315 POLR2B POL2RB|RPB2|hRPB140 RNA polymerase II subunit B protein-coding chr1-1106 chr1 224565341 224565585 + 21.0 0.000 intron (NR_136295, intron 2 of 7) intron (NR_136295, intron 2 of 7) -50854 NM_001322305 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr1-1771 chr1 66563577 66563821 + 21.0 0.000 intron (NM_001350218, intron 1 of 22) intron (NM_001350218, intron 1 of 22) 29546 NM_001350217 84251 Hs.132121 NM_032291 ENSG00000118473 SGIP1 - SH3 domain GRB2 like endophilin interacting protein 1 protein-coding chr5-544 chr5 134552360 134552604 + 21.0 0.000 intron (NM_015288, intron 4 of 10) MIR|SINE|MIR 26374 NM_015288 23338 Hs.732155 NM_015288 ENSG00000043143 JADE2 JADE-2|PHF15 jade family PHD finger 2 protein-coding chr1-1298 chr1 22861945 22862189 + 21.0 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 1159 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr9-842 chr9 137320265 137320509 + 21.0 0.000 intron (NM_017820, intron 19 of 21) intron (NM_017820, intron 19 of 21) -18116 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr3-980 chr3 69088384 69088628 + 21.0 0.000 intron (NM_006407, intron 1 of 2) intron (NM_006407, intron 1 of 2) 3569 NM_006407 10550 Hs.518060 NM_006407 ENSG00000144746 ARL6IP5 DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx ADP ribosylation factor like GTPase 6 interacting protein 5 protein-coding chr16-126 chr16 28089350 28089594 + 21.0 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat -25758 NM_001109763 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr17-1317 chr17 43520467 43520711 + 21.0 0.000 intron (NR_136228, intron 19 of 23) intron (NR_136228, intron 19 of 23) 9846 NM_001261439 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr8-552 chr8 25286235 25286479 + 21.0 0.000 intron (NM_024940, intron 5 of 51) intron (NM_024940, intron 5 of 51) -59045 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr10-556 chr10 123008920 123009164 + 21.0 0.000 promoter-TSS (NR_073479) promoter-TSS (NR_073479) 36 NM_001330174 36 Hs.81934 NM_001609 ENSG00000196177 ACADSB 2-MEBCAD|ACAD7|SBCAD acyl-CoA dehydrogenase short/branched chain protein-coding chr6-469 chr6 144659655 144659899 + 21.0 0.000 intron (NM_007124, intron 50 of 73) intron (NM_007124, intron 50 of 73) 254122 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA chr12-505 chr12 6935538 6935782 + 21.0 0.000 exon (NM_001007026, exon 5 of 10) exon (NM_001007026, exon 5 of 10) 7701 NM_001940 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr1-2351 chr1 40055676 40055920 + 21.0 0.000 intron (NM_001350484, intron 2 of 13) AluJr|SINE|Alu 14947 NM_001350481 10487 Hs.370581 NM_006367 ENSG00000131236 CAP1 CAP|CAP1-PEN cyclase associated actin cytoskeleton regulatory protein 1 protein-coding chr3-409 chr3 129561340 129561584 + 21.0 0.000 intron (NM_015103, intron 29 of 35) intron (NM_015103, intron 29 of 35) 13077 NM_001308262 132243 Hs.97358 NM_153833 ENSG00000178804 H1FOO H1.8|H1oo|osH1 H1 histone family member O oocyte specific protein-coding chr10-844 chr10 63682404 63682648 + 21.0 0.000 Intergenic Intergenic -160636 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr13-327 chr13 42134196 42134440 + 21.0 0.000 intron (NM_178009, intron 3 of 29) MLT1H1|LTR|ERVL-MaLR -3724 NR_123715 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr16-572 chr16 4688667 4688911 + 21.0 0.000 3' UTR (NM_001142291, exon 16 of 16) 3' UTR (NM_001142291, exon 16 of 16) -4904 NM_032349 84309 Hs.513315 NM_032349 ENSG00000168101 NUDT16L1 SDOS|TIRR nudix hydrolase 16 like 1 protein-coding chr10-1233 chr10 93947066 93947310 + 21.0 0.000 Intergenic Intergenic 14727 NR_002319 266971 Hs.149255 NR_002319 ENSG00000180764 PIPSL PIP5K1L1|PIP5K1P3|PSMD4P2|bA429H9.1 PIP5K1A and PSMD4 like (pseudogene) pseudo chr15-414 chr15 40183678 40183922 + 21.0 0.000 exon (NM_001211, exon 6 of 23) exon (NM_001211, exon 6 of 23) 22791 NM_001211 701 Hs.513645 NM_001211 ENSG00000156970 BUB1B BUB1beta|BUBR1|Bub1A|MAD3L|MVA1|SSK1|hBUBR1 BUB1 mitotic checkpoint serine/threonine kinase B protein-coding chr2-1474 chr2 58620106 58620350 + 21.0 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 99475 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr19-697 chr19 40420969 40421213 + 21.0 0.000 TTS (NM_013376) TTS (NM_013376) 4901 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr3-837 chr3 50244378 50244622 + 21.0 0.000 intron (NM_001282618, intron 1 of 7) intron (NM_001282618, intron 1 of 7) -2410 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr2-1284 chr2 98295548 98295792 + 21.0 0.000 intron (NM_001345864, intron 17 of 21) intron (NM_001345864, intron 17 of 21) -50485 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding chr19-1360 chr19 33287174 33287418 + 21.0 0.000 Intergenic Intergenic 15238 NM_001287424 1050 Hs.76171 NM_004364 ENSG00000245848 CEBPA C/EBP-alpha|CEBP CCAAT enhancer binding protein alpha protein-coding chr4-448 chr4 5050548 5050792 + 21.0 0.000 promoter-TSS (NM_018401) promoter-TSS (NM_018401) -810 NM_001345969 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr9-140 chr9 35829190 35829434 + 21.0 0.000 promoter-TSS (NM_001363621) promoter-TSS (NM_001363621) 84 NM_001363620 51754 Hs.9187 NM_016446 ENSG00000137103 TMEM8B C9orf127|FP588|LINC00950|NAG-5|NAG5|NGX6 transmembrane protein 8B protein-coding chr1-930 chr1 41510738 41510982 + 21.0 0.000 exon (NM_001127714, exon 8 of 8) exon (NM_001127714, exon 8 of 8) -26177 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1-1583 chr1 218299738 218299982 + 21.0 0.000 intron (NM_016052, intron 1 of 4) intron (NM_016052, intron 1 of 4) 14567 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding chr12-1169 chr12 82358434 82358678 + 21.0 0.000 promoter-TSS (NM_014167) promoter-TSS (NM_014167) 27 NM_001347934 84190 Hs.506222 NM_032230 ENSG00000127720 METTL25 C12orf26 methyltransferase like 25 protein-coding chr6-1005 chr6 69894443 69894687 + 21.0 0.000 intron (NM_001858, intron 2 of 50) MER61-int|LTR|ERV1 28009 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr1-910 chr1 3061993 3062237 + 21.0 0.000 non-coding (NR_015440, exon 3 of 6) non-coding (NR_015440, exon 3 of 6) 5610 NR_015440 440556 Hs.531041 NM_198543 ENSG00000177133 PRDM16-DT LINC00982|lnc-dPrdm16 PRDM16 divergent transcript ncRNA chr22-716 chr22 43323086 43323330 + 20.9 0.000 intron (NM_173050, intron 2 of 21) intron (NM_173050, intron 2 of 21) 20164 NM_173050 80274 Hs.133995 NM_152514 ENSG00000159307 SCUBE1 - signal peptide, CUB domain and EGF like domain containing 1 protein-coding chrX-138 chrX 47129250 47129494 + 20.9 0.000 Intergenic Intergenic 15838 NM_019056 54539 Hs.521969 NM_019056 ENSG00000147123 NDUFB11 CI-ESSS|ESSS|MC1DN30|NP17.3|Np15|P17.3 NADH:ubiquinone oxidoreductase subunit B11 protein-coding chr13-80 chr13 114281590 114281834 + 20.9 0.000 promoter-TSS (NM_001353645) promoter-TSS (NM_001353645) 111 NM_001353651 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr8-913 chr8 94473183 94473427 + 20.9 0.000 intron (NM_012415, intron 1 of 14) intron (NM_012415, intron 1 of 14) 1810 NM_001205262 25788 Hs.30561 NM_006550 ENSG00000197275 RAD54B RDH54 RAD54 homolog B protein-coding chr9-567 chr9 136286100 136286344 + 20.9 0.000 exon (NM_001291516, exon 8 of 10) exon (NM_001291516, exon 8 of 10) 17872 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr8-326 chr8 144466601 144466845 + 20.9 0.000 intron (NM_001369769, intron 1 of 17) CpG-27816 386 NM_145754 90990 Hs.528713 NM_145754 ENSG00000167702 KIFC2 - kinesin family member C2 protein-coding chr10-843 chr10 63515028 63515272 + 20.9 0.000 intron (NM_001322258, intron 1 of 24) L1MC1|LINE|L1 -6251 NM_001001330 221035 Hs.499833 NM_001001330 ENSG00000165476 REEP3 C10orf74|Yip2b receptor accessory protein 3 protein-coding chr2-1051 chr2 237669729 237669973 + 20.9 0.000 intron (NM_001137550, intron 1 of 23) intron (NM_001137550, intron 1 of 23) -22313 NM_001137551 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr2-443 chr2 46541994 46542238 + 20.9 0.000 promoter-TSS (NM_012249) promoter-TSS (NM_012249) -374 NM_012249 23433 Hs.709193 NM_012249 ENSG00000119729 RHOQ ARHQ|HEL-S-42|RASL7A|TC10|TC10A ras homolog family member Q protein-coding chr18-254 chr18 61082689 61082933 + 20.9 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -250619 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr4-1056 chr4 121217483 121217727 + 20.9 0.000 promoter-TSS (NM_001128843) promoter-TSS (NM_001128843) -978 NM_001128843 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding chr20-349 chr20 61676845 61677089 + 20.9 0.000 intron (NM_001252339, intron 1 of 14) L2a|LINE|L2 42781 NR_147702 100128310 Hs.683806 NR_147702 ENSG00000179253 LOC100128310 - uncharacterized LOC100128310 ncRNA chr21-132 chr21 38440803 38441047 + 20.9 0.000 intron (NM_001243429, intron 2 of 8) intron (NM_001243429, intron 2 of 8) 57552 NM_001331025 2078 Hs.473819 NM_004449 ENSG00000157554 ERG erg-3|p55 ETS transcription factor ERG protein-coding chr3-535 chr3 122786113 122786357 + 20.9 0.000 intron (NM_001320728, intron 1 of 6) intron (NM_001320728, intron 1 of 6) 7596 NM_024610 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr6-618 chr6 110329825 110330069 + 20.9 0.000 intron (NM_001123364, intron 1 of 4) L1MD2|LINE|L1 111 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr5-444 chr5 10566415 10566659 + 20.9 0.000 intron (NM_001164440, intron 1 of 3) intron (NM_001164440, intron 1 of 3) 2467 NM_001164440 651746 Hs.26039 NM_001164440 ENSG00000164236 ANKRD33B - ankyrin repeat domain 33B protein-coding chr6-366 chr6 156777152 156777396 + 20.9 0.000 promoter-TSS (NM_001346813) promoter-TSS (NM_001346813) -581 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr14-322 chr14 68443115 68443359 + 20.9 0.000 intron (NM_133509, intron 9 of 10) intron (NM_133509, intron 9 of 10) 185550 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr11-989 chr11 47143272 47143516 + 20.9 0.000 intron (NM_001003677, intron 4 of 8) intron (NM_001003677, intron 4 of 8) 33485 NM_032389 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr2-1468 chr2 45968916 45969160 + 20.9 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 317363 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr5-506 chr5 172283051 172283295 + 20.9 0.000 intron (NM_152277, intron 1 of 2) intron (NM_152277, intron 1 of 2) 591 NM_152277 92181 Hs.131570 NM_152277 ENSG00000168246 UBTD2 DCUBP ubiquitin domain containing 2 protein-coding chr17-697 chr17 49730291 49730535 + 20.9 0.000 intron (NM_030802, intron 2 of 7) intron (NM_030802, intron 2 of 7) -22449 NM_005827 10237 Hs.154073 NM_005827 ENSG00000121073 SLC35B1 UGTREL1 solute carrier family 35 member B1 protein-coding chr2-1946 chr2 222089055 222089299 + 20.9 0.000 Intergenic Intergenic -208970 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr1-415 chr1 43367873 43368117 + 20.9 0.000 promoter-TSS (NM_001256401) promoter-TSS (NM_001256401) 16 NM_022821 64834 Hs.25597 NM_022821 ENSG00000066322 ELOVL1 CGI-88|Ssc1 ELOVL fatty acid elongase 1 protein-coding chr2-723 chr2 8837466 8837710 + 20.9 0.000 promoter-TSS (NM_001348741) promoter-TSS (NM_001348741) 25 NM_001348736 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding chr10-364 chr10 35642402 35642646 + 20.9 0.000 Intergenic CpG -1090 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding chr16-758 chr16 88871169 88871413 + 20.9 0.000 Intergenic Intergenic -4631 NM_001294328 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr19-901 chr19 56595174 56595418 + 20.9 0.000 promoter-TSS (NM_021216) promoter-TSS (NM_021216) 0 NM_021216 58491 Hs.301431 NM_021216 ENSG00000197951 ZNF71 EZFIT zinc finger protein 71 protein-coding chr2-896 chr2 20091618 20091862 + 20.9 0.000 Intergenic Intergenic -40112 NM_014713 9741 Hs.467807 NM_014713 ENSG00000068697 LAPTM4A HUMORF13|LAPTM4|MBNT|Mtrp lysosomal protein transmembrane 4 alpha protein-coding chr11-1078 chr11 33670277 33670521 + 20.9 0.000 3' UTR (NM_012194, exon 21 of 21) 3' UTR (NM_012194, exon 21 of 21) 30341 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr16-1207 chr16 85697599 85697843 + 20.9 0.000 Intergenic MIRc|SINE|MIR -8767 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr17-407 chr17 43846281 43846525 + 20.9 0.000 promoter-TSS (NM_001168324) promoter-TSS (NM_001168324) -773 NM_001168323 146894 Hs.147313 NM_145273 ENSG00000161649 CD300LG CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4 CD300 molecule like family member g protein-coding chr5-257 chr5 32444576 32444820 + 20.9 0.000 promoter-TSS (NR_144318) promoter-TSS (NR_144318) 42 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr1-2233 chr1 11176197 11176441 + 20.9 0.000 intron (NM_004958, intron 28 of 57) intron (NM_004958, intron 28 of 57) -13036 NM_021146 10218 Hs.146559 NM_021146 ENSG00000171819 ANGPTL7 AngX|CDT6|dJ647M16.1 angiopoietin like 7 protein-coding chr22-185 chr22 45903547 45903791 + 20.9 0.000 Intergenic Intergenic 73493 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr15-132 chr15 90102650 90102894 + 20.9 0.000 promoter-TSS (NM_001290114) promoter-TSS (NM_001290114) -218 NM_002168 3418 Hs.596461 NM_002168 ENSG00000182054 IDH2 D2HGA2|ICD-M|IDH|IDHM|IDP|IDPM|mNADP-IDH isocitrate dehydrogenase (NADP(+)) 2, mitochondrial protein-coding chr16-667 chr16 81856239 81856483 + 20.9 0.000 intron (NM_002661, intron 3 of 32) MIR|SINE|MIR 77070 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding chr9-250 chr9 113594043 113594287 + 20.9 0.000 promoter-TSS (NM_001276262) promoter-TSS (NM_001276262) 36 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr9-486 chr9 124497375 124497619 + 20.9 0.000 intron (NM_004959, intron 4 of 6) intron (NM_004959, intron 4 of 6) 9902 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr19-959 chr19 17027394 17027638 + 20.9 0.000 promoter-TSS (NM_015692) promoter-TSS (NM_015692) -706 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr15-748 chr15 96868946 96869190 + 20.9 0.000 Intergenic Intergenic 85633 NR_158220 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr19-682 chr19 19361014 19361258 + 20.9 0.000 Intergenic AluJb|SINE|Alu -24667 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr16-465 chr16 1441403 1441647 + 20.9 0.000 intron (NM_001143980, intron 6 of 16) intron (NM_001143980, intron 6 of 16) 2964 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr9-472 chr9 69174241 69174485 + 20.9 0.000 promoter-TSS (NM_004817) promoter-TSS (NM_004817) 86 NM_001369872 9414 Hs.50382 NM_004817 ENSG00000119139 TJP2 C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 tight junction protein 2 protein-coding chr21-84 chr21 43362403 43362647 + 20.9 0.000 promoter-TSS (NR_131902) promoter-TSS (NR_131902) -176 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr15-172 chr15 50686523 50686767 + 20.9 0.000 non-coding (NR_149153, exon 1 of 38) non-coding (NR_149153, exon 1 of 38) 152 NM_017672 54822 Hs.512894 NM_017672 ENSG00000092439 TRPM7 ALSPDC|CHAK|CHAK1|LTRPC7|LTrpC-7|TRP-PLIK transient receptor potential cation channel subfamily M member 7 protein-coding chr21-89 chr21 17463490 17463734 + 20.9 0.000 Intergenic L2c|LINE|L2 24722 NR_037586 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA chr11-287 chr11 119205889 119206133 + 20.9 0.000 promoter-TSS (NM_005188) promoter-TSS (NM_005188) -265 NM_005188 867 Hs.504096 NM_005188 ENSG00000110395 CBL C-CBL|CBL2|FRA11B|NSLL|RNF55 Cbl proto-oncogene protein-coding chr1-1181 chr1 98053970 98054214 + 20.9 0.000 Intergenic CpG -4399 NR_046105 400765 Hs.451802 NM_001001688 ENSG00000225206 MIR137HG - MIR137 host gene ncRNA chr21-182 chr21 43600621 43600865 + 20.9 0.000 intron (NM_007031, intron 7 of 8) intron (NM_007031, intron 7 of 8) 9246 NR_106718 102464825 NR_106718 ENSG00000278433 MIR6070 hsa-mir-6070 microRNA 6070 ncRNA chr19-973 chr19 30036299 30036543 + 20.9 0.000 Intergenic L1MC1|LINE|L1 94182 NR_045557 8725 Hs.466391 NM_003796 ENSG00000105176 URI1 C19orf2|NNX3|PPP1R19|RMP|URI URI1 prefoldin like chaperone protein-coding chr16-869 chr16 85000631 85000875 + 20.9 0.000 intron (NM_001145548, intron 1 of 8) intron (NM_001145548, intron 1 of 8) 10782 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr16-1187 chr16 81564399 81564643 + 20.9 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 30619 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr8-104 chr8 22141782 22142026 + 20.9 0.000 promoter-TSS (NM_001316965) promoter-TSS (NM_001316965) 3 NM_001316964 80346 Hs.289063 NM_025232 ENSG00000168476 REEP4 C8orf20|PP432|Yip2c receptor accessory protein 4 protein-coding chr17-1268 chr17 20097853 20098097 + 20.9 0.000 intron (NM_001033553, intron 2 of 14) MER20B|DNA|hAT-Charlie 10953 NM_152904 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr7-1401 chr7 128529901 128530145 + 20.9 0.000 Intergenic Intergenic 53294 NM_018396 55798 Hs.433213 NM_018396 ENSG00000165055 METTL2B METL|METTL2|METTL2A|PSENIP1 methyltransferase like 2B protein-coding chr5-878 chr5 56488942 56489186 + 20.9 0.000 Intergenic MIR|SINE|MIR -7295 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr8-833 chr8 27665104 27665348 + 20.9 0.000 intron (NM_182826, intron 5 of 5) MIR3|SINE|MIR 31166 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr20-632 chr20 53949398 53949642 + 20.9 0.000 intron (NM_001366297, intron 8 of 8) intron (NM_001366297, intron 8 of 8) -73811 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr19-656 chr19 1236204 1236448 + 20.9 0.000 intron (NM_152769, intron 1 of 8) intron (NM_152769, intron 1 of 8) 1679 NM_152769 255057 Hs.346575 NM_152769 ENSG00000099625 CBARP BARP|C19orf26|DOS CACN subunit beta associated regulatory protein protein-coding chr12-486 chr12 112382379 112382623 + 20.9 0.000 promoter-TSS (NM_001109662) promoter-TSS (NM_001109662) -70 NM_001109662 283450 Hs.530943 NM_173813 ENSG00000173064 HECTD4 C12ord51|C12orf51|HEEL|POTAGE HECT domain E3 ubiquitin protein ligase 4 protein-coding chr8-389 chr8 38231218 38231462 + 20.9 0.000 promoter-TSS (NM_001362912) promoter-TSS (NM_001362912) -151 NR_156416 23259 Hs.434966 NM_015214 ENSG00000085788 DDHD2 SAMWD1|SPG54|iPLA(1)gamma DDHD domain containing 2 protein-coding chr15-425 chr15 51971419 51971663 + 20.9 0.000 intron (NM_001323904, intron 1 of 11) CpG 237 NM_001323904 123169 Hs.567662 NM_138792 ENSG00000166477 LEO1 RDL LEO1 homolog, Paf1/RNA polymerase II complex component protein-coding chr3-971 chr3 53577577 53577821 + 20.9 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 83088 NM_000720 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr6-941 chr6 33621776 33622020 + 20.9 0.000 intron (NM_002224, intron 1 of 57) CpG 576 NM_002224 3710 Hs.65758 NM_002224 ENSG00000096433 ITPR3 IP3R|IP3R3 inositol 1,4,5-trisphosphate receptor type 3 protein-coding chr16-658 chr16 68035924 68036168 + 20.9 0.000 intron (NM_017803, intron 2 of 16) AluSx|SINE|Alu -12179 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chr7-846 chr7 95335127 95335371 + 20.9 0.000 Intergenic Intergenic -10717 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding chr17-912 chr17 1271399 1271643 + 20.9 0.000 TTS (NM_001164405) TTS (NM_001164405) 957 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr1-2422 chr1 84379282 84379526 + 20.9 0.000 intron (NR_003927, intron 2 of 6) intron (NR_003927, intron 2 of 6) 5397 NR_003927 391051 Hs.647646 NR_003927 UOX UOXP|URICASE urate oxidase (pseudogene) pseudo chr19-1578 chr19 33774072 33774316 + 20.9 0.000 TTS (NM_022467) TTS (NM_022467) -22676 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr10-500 chr10 33155754 33155998 + 20.9 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -39069 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA chr6-591 chr6 26045098 26045342 + 20.9 0.000 promoter-TSS (NM_003531) promoter-TSS (NM_003531) -191 NM_003531 8352 Hs.248176 NM_003531 ENSG00000278272 HIST1H3C H3.1|H3/c|H3FC histone cluster 1 H3 family member c protein-coding chr13-312 chr13 27284139 27284383 + 20.9 0.000 Intergenic Intergenic 13084 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr14-176 chr14 104681776 104682020 + 20.9 0.000 Intergenic Intergenic -4149 NR_039860 100616300 NR_039860 ENSG00000265291 MIR4710 mir-4710 microRNA 4710 ncRNA chr4-1002 chr4 76546907 76547151 + 20.9 0.000 intron (NM_020859, intron 1 of 10) intron (NM_020859, intron 1 of 10) -26539 NR_039654 100616299 NR_039654 ENSG00000263445 MIR4450 mir-4450 microRNA 4450 ncRNA chr2-1329 chr2 164538325 164538569 + 20.9 0.000 intron (NM_004490, intron 3 of 13) intron (NM_004490, intron 3 of 13) 30048 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding chr16-1143 chr16 66580655 66580899 + 20.9 0.000 intron (NM_144673, intron 2 of 3) MIRb|SINE|MIR 1314 NM_001199317 146225 Hs.195685 NM_144673 ENSG00000140932 CMTM2 CKLFSF2 CKLF like MARVEL transmembrane domain containing 2 protein-coding chr7-979 chr7 77427729 77427973 + 20.9 0.000 Intergenic Intergenic -11502 NR_146938 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr6-490 chr6 11655023 11655267 + 20.9 0.000 Intergenic Intergenic 117396 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr7-604 chr7 149814283 149814527 + 20.9 0.000 intron (NR_163594, intron 68 of 102) intron (NR_163594, intron 68 of 102) -23970 NM_001099220 643641 Hs.731923 NM_001099220 ENSG00000106479 ZNF862 - zinc finger protein 862 protein-coding chr7-1152 chr7 129190111 129190355 + 20.9 0.000 intron (NM_005631, intron 1 of 11) intron (NM_005631, intron 1 of 11) 1600 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chr8-891 chr8 70839812 70840056 + 20.9 0.000 Intergenic Intergenic 170595 NM_001287258 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding chr15-60 chr15 90387945 90388189 + 20.9 0.000 promoter-TSS (NM_003870) promoter-TSS (NM_003870) -175 NM_003870 8826 Hs.430551 NM_003870 ENSG00000140575 IQGAP1 HUMORFA01|SAR1|p195 IQ motif containing GTPase activating protein 1 protein-coding chr7-553 chr7 16420958 16421202 + 20.9 0.000 exon (NM_001368197, exon 1 of 9) exon (NM_001368197, exon 1 of 9) 458 NM_001101417 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding chr1-2563 chr1 172588811 172589055 + 20.9 0.000 exon (NM_016227, exon 17 of 23) exon (NM_016227, exon 17 of 23) 55783 NM_014283 51430 Hs.204559 NM_014283 ENSG00000094975 SUCO C1orf9|CH1|OPT|SLP1 SUN domain containing ossification factor protein-coding chr17-1239 chr17 8564080 8564324 + 20.9 0.000 intron (NM_001256012, intron 7 of 42) intron (NM_001256012, intron 7 of 42) 66523 NM_001256012 4628 Hs.16355 NM_005964 ENSG00000133026 MYH10 NMMHC-IIB|NMMHCB myosin heavy chain 10 protein-coding chr18-230 chr18 26575413 26575657 + 20.9 0.000 intron (NM_001258222, intron 1 of 4) intron (NM_001258222, intron 1 of 4) 16000 NR_107024 102466874 NR_107024 ENSG00000276221 MIR8057 hsa-mir-8057 microRNA 8057 ncRNA chr1-2640 chr1 217660688 217660932 + 20.9 0.000 intron (NM_138796, intron 3 of 10) MLT1I|LTR|ERVL-MaLR 29466 NM_138796 128153 Hs.171130 NM_138796 ENSG00000162814 SPATA17 IQCH|MSRG-11|MSRG11 spermatogenesis associated 17 protein-coding chr11-734 chr11 64835490 64835734 + 20.9 0.000 exon (NM_017525, exon 15 of 37) exon (NM_017525, exon 15 of 37) 9041 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr17-644 chr17 65231639 65231883 + 20.9 0.000 Intergenic Intergenic 94391 NM_003835 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr16-513 chr16 28068072 28068316 + 20.9 0.000 Intergenic MER102b|DNA|hAT-Charlie -4480 NM_001109763 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr1-1709 chr1 31038472 31038716 + 20.9 0.000 intron (NM_001020658, intron 2 of 21) intron (NM_001020658, intron 2 of 21) 27123 NM_014676 9698 Hs.281707 NM_014676 ENSG00000134644 PUM1 HSPUM|PUMH|PUMH1|PUML1|SCA47 pumilio RNA binding family member 1 protein-coding chr16-539 chr16 70715483 70715727 + 20.9 0.000 intron (NM_001351157, intron 13 of 17) intron (NM_001351157, intron 13 of 17) -29552 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr19-684 chr19 19516054 19516298 + 20.9 0.000 promoter-TSS (NM_015965) promoter-TSS (NM_015965) -49 NM_015965 51079 Hs.534453 NM_015965 ENSG00000186010 NDUFA13 B16.6|CDA016|CGI-39|GRIM-19|GRIM19|MC1DN28 NADH:ubiquinone oxidoreductase subunit A13 protein-coding chr9-1316 chr9 124335122 124335366 + 20.9 0.000 intron (NM_001166169, intron 7 of 9) intron (NM_001166169, intron 7 of 9) -18229 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr15-298 chr15 75274602 75274846 + 20.9 0.000 Intergenic Intergenic -8117 NM_001145224 653643 Hs.672474 NM_001145224 ENSG00000140478 GOLGA6D - golgin A6 family member D protein-coding chr7-1027 chr7 131075900 131076144 + 20.9 0.000 intron (NR_109850, intron 2 of 5) MSTC|LTR|ERVL-MaLR 31008 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr2-1548 chr2 204353953 204354197 + 20.9 0.000 Intergenic LTR62|LTR|ERVL -191400 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr2-589 chr2 12155642 12155886 + 20.9 0.000 intron (NR_110196, intron 2 of 5) intron (NR_110196, intron 2 of 5) -43366 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA chr12-740 chr12 45966456 45966700 + 20.9 0.000 intron (NM_004719, intron 1 of 14) L2a|LINE|L2 23996 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding chr15-636 chr15 45152317 45152561 + 20.9 0.000 exon (NM_017434, exon 26 of 35) exon (NM_017434, exon 26 of 35) 22445 NM_017434 53905 Hs.272813 NM_017434 ENSG00000137857 DUOX1 LNOX1|NOXEF1|THOX1 dual oxidase 1 protein-coding chr1-2603 chr1 201745185 201745429 + 20.9 0.000 intron (NM_001167738, intron 1 of 26) intron (NM_001167738, intron 1 of 26) 5407 NM_001167738 89796 Hs.585374 NM_020443 ENSG00000134369 NAV1 POMFIL3|STEERIN1|UNC53H1 neuron navigator 1 protein-coding chr9-264 chr9 136306038 136306282 + 20.9 0.000 intron (NM_001291516, intron 1 of 9) intron (NM_001291516, intron 1 of 9) 741 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr1-1851 chr1 157786717 157786961 + 20.9 0.000 Intergenic AluSq2|SINE|Alu -9707 NM_001159488 79368 Hs.437393 NM_030764 ENSG00000132704 FCRL2 CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C Fc receptor like 2 protein-coding chr2-853 chr2 109607911 109608155 + 20.9 0.000 intron (NM_001321509, intron 1 of 10) intron (NM_001321509, intron 1 of 10) 5634 NM_001321513 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr2-392 chr2 43637159 43637403 + 20.9 0.000 promoter-TSS (NM_172069) promoter-TSS (NM_172069) 21 NM_172069 130271 Hs.164162 NM_172069 ENSG00000152527 PLEKHH2 PLEKHH1L pleckstrin homology, MyTH4 and FERM domain containing H2 protein-coding chr7-686 chr7 2504983 2505227 + 20.9 0.000 Intergenic Intergenic -7424 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr19-926 chr19 4676560 4676804 + 20.9 0.000 intron (NM_139159, intron 21 of 21) CpG -2600 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr2-848 chr2 85561455 85561699 + 20.9 0.000 promoter-TSS (NM_000821) promoter-TSS (NM_000821) -84 NM_001311312 2677 Hs.77719 NM_000821 ENSG00000115486 GGCX VKCFD1 gamma-glutamyl carboxylase protein-coding chr10-352 chr10 779140 779384 + 20.9 0.000 Intergenic Intergenic -89594 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr6-492 chr6 14881567 14881811 + 20.9 0.000 Intergenic Intergenic -364380 NM_004973 3720 Hs.269059 NM_004973 ENSG00000008083 JARID2 JMJ jumonji and AT-rich interaction domain containing 2 protein-coding chr15-758 chr15 100958381 100958625 + 20.9 0.000 intron (NM_024652, intron 2 of 33) intron (NM_024652, intron 2 of 33) 39146 NM_024652 79705 Hs.407918 NM_024652 ENSG00000154237 LRRK1 RIPK6|Roco1 leucine rich repeat kinase 1 protein-coding chr6-484 chr6 7156914 7157158 + 20.9 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 49075 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6-757 chr6 158161076 158161320 + 20.9 0.000 intron (NM_032861, intron 1 of 16) AluJo|SINE|Alu 7064 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr10-735 chr10 71244690 71244934 + 20.9 0.000 intron (NM_001244889, intron 1 of 15) intron (NM_001244889, intron 1 of 15) -26584 NR_038453 728978 Hs.646725 NR_038453 ENSG00000237512 UNC5B-AS1 - UNC5B antisense RNA 1 ncRNA chr15-497 chr15 66839556 66839800 + 20.9 0.000 Intergenic Intergenic 116837 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA chr19-742 chr19 18155982 18156226 + 20.9 0.000 exon (NM_005027, exon 2 of 16) exon (NM_005027, exon 2 of 16) 2941 NR_073517 5296 Hs.371344 NM_005027 ENSG00000105647 PIK3R2 MPPH|MPPH1|P85B|p85|p85-BETA phosphoinositide-3-kinase regulatory subunit 2 protein-coding chr8-292 chr8 28063108 28063352 + 20.9 0.000 intron (NM_001010906, intron 7 of 18) intron (NM_001010906, intron 7 of 18) 20706 NM_001010906 389643 Hs.370129 NM_001010906 ENSG00000189233 NUGGC C8orf80|HMFN0672|SLIP-GC nuclear GTPase, germinal center associated protein-coding chr14-395 chr14 22851284 22851528 + 20.9 0.000 Intergenic Intergenic 14821 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr17-957 chr17 30519916 30520160 + 20.9 0.000 intron (NM_004871, intron 8 of 8) intron (NM_004871, intron 8 of 8) 42630 NM_004871 9527 Hs.462680 NM_004871 ENSG00000108587 GOSR1 GOLIM2|GOS-28|GOS28|GOS28/P28|GS28|P28 golgi SNAP receptor complex member 1 protein-coding chr9-97 chr9 108934094 108934338 + 20.9 0.000 promoter-TSS (NM_017832) promoter-TSS (NM_017832) -92 NM_001330749 8518 Hs.494738 NM_003640 ENSG00000070061 ELP1 DYS|FD|IKAP|IKBKAP|IKI3|TOT1 elongator complex protein 1 protein-coding chr3-559 chr3 14425719 14425963 + 20.9 0.000 intron (NM_001134367, intron 2 of 14) intron (NM_001134367, intron 2 of 14) 23235 NR_103507 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr2-930 chr2 44100467 44100711 + 20.9 0.000 Intergenic Intergenic -68214 NM_177969 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding chr16-734 chr16 68790169 68790413 + 20.9 0.000 intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 52999 NM_004360 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr2-1828 chr2 135663346 135663590 + 20.9 0.000 intron (NM_001282798, intron 18 of 25) intron (NM_001282798, intron 18 of 25) -1929 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA chr7-1241 chr7 27347179 27347423 + 20.9 0.000 Intergenic Intergenic -100072 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA chr1-1117 chr1 939526 939770 + 20.9 0.000 intron (NM_152486, intron 7 of 13) intron (NM_152486, intron 7 of 13) 13917 NM_152486 148398 Hs.335293 NM_152486 ENSG00000187634 SAMD11 MRS sterile alpha motif domain containing 11 protein-coding chr17-1421 chr17 77831464 77831708 + 20.9 0.000 Intergenic Intergenic 52501 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr11-376 chr11 123741458 123741702 + 20.9 0.000 promoter-TSS (NM_003455) promoter-TSS (NM_003455) 80 NM_001301779 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr2-1007 chr2 182020197 182020441 + 20.9 0.000 intron (NM_001261425, intron 2 of 5) intron (NM_001261425, intron 2 of 5) 34466 NM_001261424 151242 Hs.10941 NM_001080545 ENSG00000150722 PPP1R1C IPP5 protein phosphatase 1 regulatory inhibitor subunit 1C protein-coding chr17-1294 chr17 39166706 39166950 + 20.9 0.000 promoter-TSS (NM_001143968) promoter-TSS (NM_001143968) -667 NM_001143968 390790 Hs.568007 NM_001143968 ENSG00000141748 ARL5C ARL12 ADP ribosylation factor like GTPase 5C protein-coding chr19-779 chr19 3543580 3543824 + 20.9 0.000 TTS (NM_174983) TTS (NM_174983) 4545 NM_001135580 100128569 Hs.664978 NM_001135580 ENSG00000183397 C19orf71 - chromosome 19 open reading frame 71 protein-coding chr14-682 chr14 29099374 29099618 + 20.7 0.000 Intergenic Intergenic -313709 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA chr4-389 chr4 787896 788140 + 20.7 0.000 intron (NM_006651, intron 3 of 3) intron (NM_006651, intron 3 of 3) -6170 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr1-1092 chr1 201283337 201283581 + 20.7 0.000 promoter-TSS (NM_000299) promoter-TSS (NM_000299) 7 NM_000299 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr17-929 chr17 7933024 7933268 + 20.7 0.000 exon (NM_001037144, exon 1 of 19) exon (NM_001037144, exon 1 of 19) 940 NM_001353206 116840 Hs.348012 NM_053051 ENSG00000170037 CNTROB LIP8|PP1221 centrobin, centriole duplication and spindle assembly protein protein-coding chr12-352 chr12 120466509 120466753 + 20.7 0.000 intron (NM_003769, intron 1 of 3) AluJo|SINE|Alu 3117 NM_003769 8683 Hs.706889 NM_003769 ENSG00000111786 SRSF9 SFRS9|SRp30c serine and arginine rich splicing factor 9 protein-coding chr10-314 chr10 31031924 31032168 + 20.7 0.000 promoter-TSS (NM_001143767) promoter-TSS (NM_001143767) -109 NR_026560 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding chr12-383 chr12 131896142 131896386 + 20.7 0.000 intron (NM_003565, intron 3 of 27) CpG 1642 NM_003565 8408 Hs.47061 NM_003565 ENSG00000177169 ULK1 ATG1|ATG1A|UNC51|Unc51.1|hATG1 unc-51 like autophagy activating kinase 1 protein-coding chr2-219 chr2 210170618 210170862 + 20.7 0.000 intron (NM_001307976, intron 1 of 13) intron (NM_001307976, intron 1 of 13) 669 NM_152519 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding chr2-632 chr2 164145285 164145529 + 20.7 0.000 Intergenic LTR78|LTR|ERV1 -409399 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr9-602 chr9 98255548 98255792 + 20.7 0.000 promoter-TSS (NM_001267571) promoter-TSS (NM_001267571) -21 NM_018421 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr8-504 chr8 80487411 80487655 + 20.7 0.000 exon (NM_023929, exon 1 of 7) exon (NM_023929, exon 1 of 7) 1307 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding chr10-405 chr10 62048947 62049191 + 20.7 0.000 promoter-TSS (NM_001244638) promoter-TSS (NM_001244638) -288 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding chr4-453 chr4 47290116 47290360 + 20.7 0.000 intron (NM_000812, intron 4 of 8) THE1B|LTR|ERVL-MaLR 173464 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding chr16-197 chr16 49857127 49857371 + 20.7 0.000 intron (NM_001271620, intron 1 of 7) CpG 670 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr8-431 chr8 144265301 144265545 + 20.7 0.000 intron (NM_015201, intron 3 of 15) intron (NM_015201, intron 3 of 15) -1030 NM_001080514 642658 Hs.553250 NM_001008271 ENSG00000260428 SCX SCXA|SCXB|bHLHa48 scleraxis bHLH transcription factor protein-coding chr1-1079 chr1 156896615 156896859 + 20.7 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 3006 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr6-841 chr6 112008835 112009079 + 20.7 0.000 Intergenic Intergenic -45118 NM_003880 8838 Hs.558428 NM_003880 ENSG00000112761 CCN6 LIBC|PPAC|PPD|WISP-3|WISP3 cellular communication network factor 6 protein-coding chr8-174 chr8 56993894 56994138 + 20.7 0.000 promoter-TSS (NM_017813) promoter-TSS (NM_017813) -149 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding chr8-254 chr8 23682440 23682684 + 20.7 0.000 intron (NM_001256339, intron 2 of 2) CpG 327 NM_001256339 4824 Hs.55999 NM_006167 ENSG00000167034 NKX3-1 BAPX2|NKX3|NKX3.1|NKX3A NK3 homeobox 1 protein-coding chr1-1708 chr1 30907816 30908060 + 20.7 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 820 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr11-766 chr11 117217267 117217511 + 20.7 0.000 intron (NM_004716, intron 12 of 16) intron (NM_004716, intron 12 of 16) 14684 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr17-630 chr17 49677956 49678200 + 20.7 0.000 promoter-TSS (NM_001007228) promoter-TSS (NM_001007228) 19 NM_001007228 8405 Hs.463382 NM_003563 ENSG00000121067 SPOP BTBD32|TEF2 speckle type BTB/POZ protein protein-coding chr2-1267 chr2 84919705 84919949 + 20.7 0.000 Intergenic MER44B|DNA|TcMar-Tigger 14171 NM_021103 9168 Hs.446574 NM_021103 ENSG00000034510 TMSB10 MIG12|TB10 thymosin beta 10 protein-coding chr12-806 chr12 11658910 11659154 + 20.7 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 9178 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr4-707 chr4 80017462 80017706 + 20.7 0.000 intron (NM_001286781, intron 11 of 16) intron (NM_001286781, intron 11 of 16) 55645 NM_058172 118429 Hs.162963 NM_058172 ENSG00000163297 ANTXR2 CMG-2|CMG2|HFS|ISH|JHF ANTXR cell adhesion molecule 2 protein-coding chr10-594 chr10 104317285 104317529 + 20.7 0.000 intron (NM_001272013, intron 1 of 1) MER5A1|DNA|hAT-Charlie -5957 NR_120622 101927472 Hs.670333 NR_120622 ITPRIP-AS1 - ITPRIP antisense RNA 1 ncRNA chr10-460 chr10 29895479 29895723 + 20.7 0.000 Intergenic Intergenic -158665 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr11-980 chr11 33774640 33774884 + 20.7 0.000 promoter-TSS (NM_033406) promoter-TSS (NM_033406) 63 NR_120550 101928440 Hs.202343 NR_120550 ENSG00000254508 FBXO3-DT FBXO3-AS1 FBXO3 divergent transcript ncRNA chr10-983 chr10 30831090 30831334 + 20.7 0.000 Intergenic Intergenic 107993 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr7-781 chr7 111562164 111562408 + 20.7 0.000 promoter-TSS (NM_001350960) promoter-TSS (NM_001350960) 5 NM_001350960 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding chr10-1238 chr10 97117684 97117928 + 20.7 0.000 intron (NM_003061, intron 4 of 36) MIR3|SINE|MIR 15050 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA chr6-721 chr6 120759543 120759787 + 20.7 0.000 Intergenic L2c|LINE|L2 574815 NM_152730 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding chr6-964 chr6 38776512 38776756 + 20.7 0.000 intron (NM_001371, intron 12 of 91) intron (NM_001371, intron 12 of 91) 61323 NM_001371 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding chr7-958 chr7 55099656 55099900 + 20.7 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -10061 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr5-401 chr5 172107684 172107928 + 20.7 0.000 exon (NM_005990, exon 5 of 19) exon (NM_005990, exon 5 of 19) 80418 NM_005990 6793 Hs.744005 NM_005990 ENSG00000072786 STK10 LOK|PRO2729 serine/threonine kinase 10 protein-coding chrX-495 chrX 76172846 76173090 + 20.7 0.000 promoter-TSS (NM_001300888) promoter-TSS (NM_001300888) 39 NM_001300888 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding chr6-598 chr6 40948106 40948350 + 20.7 0.000 intron (NR_110873, intron 1 of 5) intron (NR_110873, intron 1 of 5) 75052 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr20-218 chr20 62413950 62414194 + 20.7 0.000 exon (NM_080833, exon 10 of 14) exon (NM_080833, exon 10 of 14) -6789 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr8-484 chr8 37543729 37543973 + 20.7 0.000 Intergenic MIRc|SINE|MIR -22465 NR_121621 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA chr5-803 chr5 140146043 140146287 + 20.7 0.000 Intergenic CpG -11154 NR_130738 101929719 Hs.150064 NR_130738 ENSG00000254363 LOC101929719 - uncharacterized LOC101929719 ncRNA chr14-542 chr14 60096040 60096284 + 20.7 0.000 intron (NM_022495, intron 1 of 9) PRIMA4-int|LTR|ERV1 4239 NM_001330177 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding chr10-805 chr10 28111789 28112033 + 20.7 0.000 intron (NR_134518, intron 10 of 16) intron (NR_134518, intron 10 of 16) -38533 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA chr2-1043 chr2 233487277 233487521 + 20.7 0.000 intron (NM_001365479, intron 28 of 31) L1M5|LINE|L1 78174 NM_018218 55230 Hs.96513 NM_018218 ENSG00000085982 USP40 - ubiquitin specific peptidase 40 protein-coding chr7-564 chr7 44225772 44226016 + 20.7 0.000 intron (NM_172084, intron 12 of 15) intron (NM_172084, intron 12 of 15) 24916 NM_006555 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr19-783 chr19 4518561 4518805 + 20.7 0.000 promoter-TSS (NM_001367868) promoter-TSS (NM_001367868) -197 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chr12-650 chr12 56041865 56042109 + 20.7 0.000 promoter-TSS (NM_001029) promoter-TSS (NM_001029) 69 NM_001029 6231 Hs.447562 NM_001029 ENSG00000197728 RPS26 DBA10|S26|eS26 ribosomal protein S26 protein-coding chr9-939 chr9 114214207 114214451 + 20.7 0.000 intron (NM_032888, intron 12 of 60) intron (NM_032888, intron 12 of 60) 4895 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr11-819 chr11 86174480 86174724 + 20.7 0.000 Intergenic Intergenic -69782 NM_001308007 8726 Hs.503510 NM_003797 ENSG00000074266 EED COGIS|HEED|WAIT1 embryonic ectoderm development protein-coding chr7-504 chr7 32957925 32958169 + 20.7 0.000 intron (NM_007270, intron 1 of 9) intron (NM_007270, intron 1 of 9) 607 NM_007270 11328 Hs.103934 NM_007270 ENSG00000122642 FKBP9 FKBP60|FKBP63|PPIase FKBP prolyl isomerase 9 protein-coding chr3-1082 chr3 194472595 194472839 + 20.7 0.000 intron (NM_001367549, intron 2 of 33) L1PA16|LINE|L1 -4478 NM_024524 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr17-976 chr17 43579694 43579938 + 20.7 0.000 Intergenic Intergenic -33476 NM_001079675 2118 Hs.434059 NM_001986 ENSG00000175832 ETV4 E1A-F|E1AF|PEA3|PEAS3 ETS variant 4 protein-coding chr16-897 chr16 89177188 89177432 + 20.7 0.000 intron (NM_004933, intron 1 of 13) intron (NM_004933, intron 1 of 13) 5562 NM_004933 1013 Hs.148090 NM_004933 ENSG00000129910 CDH15 CDH14|CDH3|CDHM|MCAD|MRD3 cadherin 15 protein-coding chr14-533 chr14 53539636 53539880 + 20.7 0.000 Intergenic Intergenic 386404 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr10-521 chr10 80459154 80459398 + 20.7 0.000 promoter-TSS (NM_001351269) promoter-TSS (NM_001351269) -109 NM_001351269 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr18-140 chr18 48952555 48952799 + 20.7 0.000 Intergenic CpG -1966 NM_005904 4092 Hs.465087 NM_005904 ENSG00000101665 SMAD7 CRCS3|MADH7|MADH8 SMAD family member 7 protein-coding chr8-386 chr8 30812658 30812902 + 20.7 0.000 promoter-TSS (NM_001009552) promoter-TSS (NM_001009552) 38 NM_001009552 5516 Hs.491440 NM_004156 ENSG00000104695 PPP2CB PP2Abeta|PP2CB protein phosphatase 2 catalytic subunit beta protein-coding chr1-607 chr1 161389816 161390060 + 20.7 0.000 Intergenic CpG -22055 NM_001013625 257177 Hs.534593 NM_001013625 ENSG00000188931 CFAP126 C1orf192|Flattop|Fltp cilia and flagella associated protein 126 protein-coding chr14-503 chr14 21085101 21085345 + 20.7 0.000 intron (NM_001278530, intron 18 of 22) intron (NM_001278530, intron 18 of 22) 13432 NM_016423 51222 Hs.250493 NM_016423 ENSG00000165804 ZNF219 ZFP219 zinc finger protein 219 protein-coding chr2-1087 chr2 55168622 55168866 + 20.7 0.000 Intergenic Intergenic -30913 NM_001321904 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding chr14-738 chr14 69079162 69079406 + 20.7 0.000 intron (NM_003861, intron 6 of 8) intron (NM_003861, intron 6 of 8) 73315 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr10-295 chr10 78029440 78029684 + 20.7 0.000 promoter-TSS (NM_007055) promoter-TSS (NM_007055) -47 NM_007055 11128 Hs.436896 NM_007055 ENSG00000148606 POLR3A ADDH|HLD7|RPC1|RPC155|WDRTS|hRPC155 RNA polymerase III subunit A protein-coding chr1-2575 chr1 181191850 181192094 + 20.7 0.000 Intergenic Intergenic 17488 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA chr15-101 chr15 67065689 67065933 + 20.7 0.000 5' UTR (NM_005902, exon 1 of 9) 5' UTR (NM_005902, exon 1 of 9) 209 NM_005902 4088 Hs.727986 NM_005902 ENSG00000166949 SMAD3 HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3 SMAD family member 3 protein-coding chr22-311 chr22 50200339 50200583 + 20.7 0.000 promoter-TSS (NM_031454) promoter-TSS (NM_031454) -550 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr2-1208 chr2 26890221 26890465 + 20.7 0.000 intron (NM_001253724, intron 1 of 12) intron (NM_001253724, intron 1 of 12) 41919 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr9-1307 chr9 121242508 121242752 + 20.7 0.000 intron (NM_001353053, intron 6 of 25) MLT1L|LTR|ERVL-MaLR -25532 NM_001127664 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr17-334 chr17 8376650 8376894 + 20.7 0.000 promoter-TSS (NM_001304947) promoter-TSS (NM_001304947) -68 NM_001304947 124751 Hs.304604 NM_213597 ENSG00000184619 KRBA2 - KRAB-A domain containing 2 protein-coding chr2-1302 chr2 121388064 121388308 + 20.7 0.000 intron (NM_015282, intron 29 of 38) intron (NM_015282, intron 29 of 38) -102984 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr9-650 chr9 36141698 36141942 + 20.7 0.000 intron (NM_001287014, intron 1 of 1) AluJr|SINE|Alu 5035 NM_001287014 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding chr3-1103 chr3 23810578 23810822 + 20.7 0.000 intron (NM_001202476, intron 1 of 4) CpG 246 NM_001202476 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr12-898 chr12 118052698 118052942 + 20.7 0.000 intron (NM_001278557, intron 1 of 8) intron (NM_001278557, intron 1 of 8) 8391 NM_001278558 55884 Hs.506985 NM_018639 ENSG00000176871 WSB2 SBA2 WD repeat and SOCS box containing 2 protein-coding chr13-528 chr13 110777424 110777668 + 20.7 0.000 Intergenic L1MC4|LINE|L1 35538 NR_135280 283486 Hs.447504 NR_135280 ENSG00000259831 LINC00567 - long intergenic non-protein coding RNA 567 ncRNA chr11-1108 chr11 59221725 59221969 + 20.7 0.000 Intergenic Intergenic -8920 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding chr12-689 chr12 109385339 109385583 + 20.7 0.000 Intergenic AluJb|SINE|Alu -3258 NM_001101421 283446 Hs.512008 NM_173597 ENSG00000174527 MYO1H - myosin IH protein-coding chr16-638 chr16 23081801 23082045 + 20.7 0.000 intron (NM_020718, intron 12 of 15) intron (NM_020718, intron 12 of 15) 67347 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding chr6-305 chr6 37353774 37354018 + 20.7 0.000 promoter-TSS (NM_003958) promoter-TSS (NM_003958) -87 NM_003958 9025 Hs.485278 NM_003958 ENSG00000112130 RNF8 hRNF8 ring finger protein 8 protein-coding chr7-1023 chr7 129550824 129551068 + 20.7 0.000 Intergenic Intergenic 48415 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr12-133 chr12 133037237 133037481 + 20.7 0.000 promoter-TSS (NM_003428) promoter-TSS (NM_003428) 73 NM_003428 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding chr19-584 chr19 12721974 12722218 + 20.7 0.000 intron (NM_001136195, intron 2 of 25) CpG 163 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr10-313 chr10 23095069 23095313 + 20.7 0.000 promoter-TSS (NM_012228) promoter-TSS (NM_012228) -388 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding chr14-206 chr14 104784019 104784263 + 20.7 0.000 intron (NM_001014431, intron 2 of 13) intron (NM_001014431, intron 2 of 13) 9460 NM_005163 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr12-662 chr12 64461665 64461909 + 20.7 0.000 intron (NM_013254, intron 3 of 20) MER77B|LTR|ERVL 9667 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr11-1422 chr11 11813331 11813575 + 20.7 0.000 Intergenic Intergenic -27970 NM_017944 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding chr8-717 chr8 144506045 144506289 + 20.7 0.000 intron (NM_005309, intron 7 of 10) CpG-27821 2027 NM_005309 2875 Hs.103502 NM_005309 ENSG00000167701 GPT AAT1|ALT1|GPT1 glutamic--pyruvic transaminase protein-coding chr15-570 chr15 63338254 63338498 + 20.7 0.000 intron (NM_001218, intron 8 of 10) intron (NM_001218, intron 8 of 10) 43470 NR_135511 771 Hs.210995 NM_001218 ENSG00000074410 CA12 CA-XII|CAXII|HsT18816|T18816 carbonic anhydrase 12 protein-coding chr7-609 chr7 1420834 1421078 + 20.7 0.000 Intergenic Intergenic 38514 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr7-1386 chr7 116227695 116227939 + 20.7 0.000 intron (NM_152829, intron 1 of 6) intron (NM_152829, intron 1 of 6) 4864 NM_152829 26136 Hs.592286 NM_015641 ENSG00000135269 TES TESS|TESS-2 testin LIM domain protein protein-coding chr2-666 chr2 26165171 26165415 + 20.7 0.000 Intergenic MER63B|DNA|hAT-Blackjack -7795 NM_001168241 150946 Hs.187912 NM_001168241 ENSG00000157833 GAREM2 FAM59B|GAREML GRB2 associated regulator of MAPK1 subtype 2 protein-coding chr8-907 chr8 86785307 86785551 + 20.7 0.000 Intergenic L1M3d|LINE|L1 -41754 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr5-546 chr5 137858246 137858490 + 20.7 0.000 Intergenic MIRc|SINE|MIR -9488 NM_006790 9499 Hs.84665 NM_006790 ENSG00000120729 MYOT LGMD1|LGMD1A|MFM3|TTID|TTOD myotilin protein-coding chr1-1145 chr1 25820888 25821132 + 20.7 0.000 non-coding (NR_024498, exon 1 of 1) non-coding (NR_024498, exon 1 of 1) 182 NM_001099626 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr2-288 chr2 74553910 74554154 + 20.7 0.000 promoter-TSS (NM_001289164) promoter-TSS (NM_001289164) -90 NM_001289164 84695 Hs.469045 NM_032603 ENSG00000115318 LOXL3 LOXL lysyl oxidase like 3 protein-coding chr4-302 chr4 153541533 153541777 + 20.7 0.000 intron (NM_001131007, intron 3 of 34) L2|LINE|L2 75295 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr22-447 chr22 38457879 38458123 + 20.7 0.000 Intergenic MIRc|SINE|MIR -2802 NM_152868 3761 Hs.32505 NM_004981 ENSG00000168135 KCNJ4 HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3 potassium voltage-gated channel subfamily J member 4 protein-coding chr4-374 chr4 98928211 98928455 + 20.7 0.000 intron (NM_001331017, intron 1 of 7) CpG 800 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chr3-759 chr3 112635962 112636206 + 20.7 0.000 intron (NM_199512, intron 2 of 7) intron (NM_199512, intron 2 of 7) 5059 NM_199511 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr17-925 chr17 4562509 4562753 + 20.7 0.000 Intergenic Intergenic -2054 NM_153338 124975 Hs.130749 NM_153338 ENSG00000167741 GGT6 - gamma-glutamyltransferase 6 protein-coding chr11-505 chr11 64247284 64247528 + 20.7 0.000 promoter-TSS (NM_138689) promoter-TSS (NM_138689) 352 NR_135086 105369340 Hs.697228 NR_135086 ENSG00000256940 PPP1R14B-AS1 - PPP1R14B antisense RNA 1 ncRNA chr8-632 chr8 51962108 51962352 + 20.7 0.000 Intergenic L2a|LINE|L2 -63044 NM_001286782 115294 Hs.671268 NM_052937 ENSG00000168300 PCMTD1 - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein-coding chr1-2358 chr1 41902034 41902278 + 20.7 0.000 intron (NR_038261, intron 2 of 3) intron (NR_038261, intron 2 of 3) 16766 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr11-371 chr11 89491226 89491470 + 20.7 0.000 promoter-TSS (NM_001143836) promoter-TSS (NM_001143836) 27 NM_001291926 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr17-848 chr17 30380158 30380402 + 20.7 0.000 promoter-TSS (NM_001199775) promoter-TSS (NM_001199775) -198 NM_001199775 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr7-605 chr7 155644348 155644592 + 20.7 0.000 promoter-TSS (NM_053043) promoter-TSS (NM_053043) -64 NR_126344 100506302 Hs.87856 NR_126344 ENSG00000216895 LOC100506302 - uncharacterized LOC100506302 ncRNA chr9-981 chr9 129495918 129496162 + 20.7 0.000 intron (NR_038955, intron 2 of 4) CpG 7380 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr9-326 chr9 2621225 2621469 + 20.7 0.000 promoter-TSS (NM_001322226) promoter-TSS (NM_001322226) -440 NM_001018056 7436 Hs.370422 NM_003383 ENSG00000147852 VLDLR CAMRQ1|CARMQ1|CHRMQ1|VLDL-R|VLDLRCH very low density lipoprotein receptor protein-coding chr16-520 chr16 31201813 31202057 + 20.7 0.000 promoter-TSS (NR_102400) promoter-TSS (NR_102400) 50 NR_102400 100652740 Hs.550659 NR_102400 ENSG00000261359 PYCARD-AS1 C16orf98|PYCARDOS PYCARD antisense RNA 1 ncRNA chr2-1036 chr2 230415996 230416240 + 20.7 0.000 promoter-TSS (NM_001206703) promoter-TSS (NM_001206703) -38 NM_001206702 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding chr4-582 chr4 3447005 3447249 + 20.7 0.000 intron (NM_001528, intron 10 of 13) intron (NM_001528, intron 10 of 13) 5159 NM_001297439 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr6-513 chr6 46491802 46492046 + 20.7 0.000 promoter-TSS (NM_001251974) promoter-TSS (NM_001251974) -128 NR_125837 101926898 Hs.639416 NR_125837 LOC101926898 - uncharacterized LOC101926898 ncRNA chr13-255 chr13 94061633 94061877 + 20.7 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) 126236 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr6-815 chr6 63276932 63277176 + 20.7 0.000 3' UTR (NM_016571, exon 4 of 4) 3' UTR (NM_016571, exon 4 of 4) 42923 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding chr19-859 chr19 8459600 8459844 + 20.7 0.000 intron (NM_001297418, intron 3 of 13) intron (NM_001297418, intron 3 of 13) 14747 NM_005968 4670 Hs.465808 NM_005968 ENSG00000099783 HNRNPM CEAR|HNRNPM4|HNRPM|HNRPM4|HTGR1|NAGR1|hnRNP M heterogeneous nuclear ribonucleoprotein M protein-coding chrX-279 chrX 12977860 12978104 + 20.7 0.000 TTS (NM_021109) TTS (NM_021109) 2872 NM_021109 7114 Hs.437277 NM_021109 ENSG00000205542 TMSB4X FX|PTMB4|TB4X|TMSB4 thymosin beta 4 X-linked protein-coding chr5-827 chr5 154758562 154758806 + 20.7 0.000 intron (NM_001367719, intron 1 of 18) intron (NM_001367719, intron 1 of 18) 1530 NM_001367719 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding chr1-2371 chr1 46084571 46084815 + 20.6 0.000 intron (NM_001303427, intron 1 of 9) intron (NM_001303427, intron 1 of 9) 45980 NM_001328651 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr6-508 chr6 39855452 39855696 + 20.6 0.000 intron (NM_015345, intron 1 of 24) intron (NM_015345, intron 1 of 24) 41806 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr1-2683 chr1 240350710 240350954 + 20.6 0.000 intron (NM_001348094, intron 11 of 14) intron (NM_001348094, intron 11 of 14) 258949 NM_001305424 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr2-702 chr2 182866299 182866543 + 20.6 0.000 exon (NM_001463, exon 1 of 6) exon (NM_001463, exon 1 of 6) 216 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding chr19-1196 chr19 12615880 12616124 + 20.6 0.000 intron (NM_153358, intron 1 of 3) L1MC2|LINE|L1 5082 NM_153358 163049 Hs.720677 NM_153358 ENSG00000173875 ZNF791 - zinc finger protein 791 protein-coding chr12-894 chr12 111424392 111424636 + 20.6 0.000 intron (NM_005475, intron 2 of 7) intron (NM_005475, intron 2 of 7) -10348 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding chr1-1201 chr1 156894706 156894950 + 20.6 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 1097 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr20-180 chr20 51022959 51023203 + 20.6 0.000 promoter-TSS (NM_002237) promoter-TSS (NM_002237) 26 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr7-208 chr7 92447290 92447534 + 20.6 0.000 promoter-TSS (NR_052016) promoter-TSS (NR_052016) -70 NM_021167 57798 Hs.21145 NM_021167 ENSG00000157259 GATAD1 CMD2B|ODAG|RG083M05.2 GATA zinc finger domain containing 1 protein-coding chr17-1111 chr17 13140826 13141070 + 20.6 0.000 Intergenic Intergenic -122884 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr3-654 chr3 48570758 48571002 + 20.6 0.000 exon (NM_000094, exon 94 of 118) exon (NM_000094, exon 94 of 118) -7099 NM_033199 90226 Hs.631914 NM_033199 ENSG00000145040 UCN2 SRP|UCN-II|UCNI|UR|URP urocortin 2 protein-coding chr3-666 chr3 117036348 117036592 + 20.6 0.000 Intergenic Intergenic 115039 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr9-539 chr9 122904845 122905089 + 20.6 0.000 intron (NM_001100588, intron 1 of 20) CpG 392 NM_018835 54542 Hs.533499 NM_018835 ENSG00000056586 RC3H2 MNAB|RNF164 ring finger and CCCH-type domains 2 protein-coding chr6-196 chr6 96897719 96897963 + 20.6 0.000 promoter-TSS (NM_014165) promoter-TSS (NM_014165) 50 NM_014165 29078 Hs.512144 NM_014165 ENSG00000123545 NDUFAF4 C6orf66|HRPAP20|HSPC125|MC1DN15|My013|bA22L21.1 NADH:ubiquinone oxidoreductase complex assembly factor 4 protein-coding chr5-313 chr5 119453030 119453274 + 20.6 0.000 intron (NM_001199291, intron 1 of 24) intron (NM_001199291, intron 1 of 24) 655 NM_001292027 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding chr2-1289 chr2 105576685 105576929 + 20.6 0.000 Intergenic Intergenic 33752 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA chrX-289 chrX 37521138 37521382 + 20.6 0.000 Intergenic Intergenic -50401 NM_198511 347404 Hs.521932 NM_198511 ENSG00000147036 LANCL3 - LanC like 3 protein-coding chrX-199 chrX 45743324 45743568 + 20.6 0.000 Intergenic MLT1A1-int|LTR|ERVL-MaLR 2820 NR_029635 407006 NR_029635 ENSG00000207870 MIR221 MIRN221|miRNA221|mir-221 microRNA 221 ncRNA chr3-1321 chr3 58564817 58565061 + 20.6 0.000 3' UTR (NM_001076778, exon 4 of 4) 3' UTR (NM_001076778, exon 4 of 4) 12452 NM_001076778 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr13-163 chr13 114314811 114315055 + 20.6 0.000 intron (NM_001164145, intron 1 of 2) intron (NM_001164145, intron 1 of 2) 430 NM_032436 283489 Hs.7542 NM_032436 ENSG00000198824 CHAMP1 C13orf8|CAMP|CHAMP|MRD40|ZNF828 chromosome alignment maintaining phosphoprotein 1 protein-coding chr6-882 chr6 170180773 170181017 + 20.6 0.000 Intergenic Intergenic 20253 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr19-1501 chr19 9916641 9916885 + 20.6 0.000 intron (NM_058164, intron 1 of 5) L2a|LINE|L2 -2962 NM_001304347 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr6-189 chr6 8064253 8064497 + 20.6 0.000 promoter-TSS (NM_201280) promoter-TSS (NM_201280) 14 NM_201280 63915 Hs.719272 NM_201280 ENSG00000188428 BLOC1S5 BLOS5|MU|MUTED biogenesis of lysosomal organelles complex 1 subunit 5 protein-coding chr1-1693 chr1 25818999 25819243 + 20.6 0.000 promoter-TSS (NM_001099627) promoter-TSS (NM_001099627) -785 NM_001099627 56181 Hs.149305 NM_019557 ENSG00000117640 MTFR1L FAM54B|HYST1888|MST116|MSTP116 mitochondrial fission regulator 1 like protein-coding chr6-637 chr6 166155050 166155294 + 20.6 0.000 Intergenic AluJo|SINE|Alu 12679 NM_001366285 6862 Hs.389457 NM_003181 ENSG00000164458 TBXT SAVA|T|TFT T-box transcription factor T protein-coding chr15-455 chr15 38474209 38474453 + 20.6 0.000 intron (NM_173611, intron 6 of 7) intron (NM_173611, intron 6 of 7) 20204 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr1-2483 chr1 114581579 114581823 + 20.6 0.000 promoter-TSS (NM_005872) promoter-TSS (NM_005872) -86 NM_005872 10286 Hs.22960 NM_005872 ENSG00000116752 BCAS2 DAM1|SPF27|Snt309 BCAS2 pre-mRNA processing factor protein-coding chr19-641 chr19 49809361 49809605 + 20.6 0.000 exon (NM_001352262, exon 6 of 11) exon (NM_001352262, exon 6 of 11) 3809 NM_001352262 80199 Hs.288800 NM_025129 ENSG00000010361 FUZ CPLANE3|FY|NTD fuzzy planar cell polarity protein protein-coding chr1-1589 chr1 226268628 226268872 + 20.6 0.000 intron (NM_001366239, intron 7 of 13) MER68|LTR|ERVL 40414 NM_001366245 286826 Hs.120817 NM_173083 ENSG00000183814 LIN9 BARA|BARPsv|Lin-9|TGS|TGS1|TGS2 lin-9 DREAM MuvB core complex component protein-coding chrX-259 chrX 100865000 100865244 + 20.6 0.000 intron (NM_007052, intron 2 of 12) intron (NM_007052, intron 2 of 12) 9223 NM_001271815 27035 Hs.592227 NM_007052 ENSG00000007952 NOX1 GP91-2|MOX1|NOH-1|NOH1 NADPH oxidase 1 protein-coding chr2-273 chr2 158968446 158968690 + 20.6 0.000 promoter-TSS (NR_146421) promoter-TSS (NR_146421) -66 NM_001145909 85461 Hs.61590 NM_033394 ENSG00000115183 TANC1 ROLSB|TANC tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 protein-coding chr21-97 chr21 32451253 32451497 + 20.6 0.000 intron (NM_001320744, intron 1 of 5) intron (NM_001320744, intron 1 of 5) 38669 NM_001320744 59271 Hs.208358 NM_058187 ENSG00000166979 EVA1C B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21 eva-1 homolog C protein-coding chr1-815 chr1 17633591 17633835 + 20.6 0.000 intron (NM_001319838, intron 6 of 17) intron (NM_001319838, intron 6 of 17) 15400 NM_001328124 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chrX-74 chrX 41084998 41085242 + 20.6 0.000 promoter-TSS (NM_001039590) promoter-TSS (NM_001039590) -325 NM_001039590 8239 Hs.77578 NM_004652 ENSG00000124486 USP9X DFFRX|FAF|FAM|MRX99|MRXS99F ubiquitin specific peptidase 9 X-linked protein-coding chr19-984 chr19 38183382 38183626 + 20.6 0.000 intron (NM_015073, intron 16 of 21) L2a|LINE|L2 20408 NR_145800 109623473 NR_145800 SNORD152 - small nucleolar RNA, C/D box 152 snoRNA chr17-1405 chr17 75685339 75685583 + 20.6 0.000 intron (NR_126037, intron 3 of 8) intron (NR_126037, intron 3 of 8) 18123 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr6-149 chr6 107958195 107958439 + 20.6 0.000 promoter-TSS (NM_007214) promoter-TSS (NM_007214) -109 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr5-883 chr5 59769029 59769273 + 20.6 0.000 promoter-TSS (NM_001364601) promoter-TSS (NM_001364601) -303 NM_001197218 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr9-1115 chr9 124472921 124473165 + 20.6 0.000 Intergenic Intergenic 34356 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr1-2661 chr1 227919178 227919422 + 20.6 0.000 3' UTR (NM_003395, exon 4 of 4) 3' UTR (NM_003395, exon 4 of 4) 22383 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr9-714 chr9 129432439 129432683 + 20.6 0.000 Intergenic Intergenic -56099 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr16-337 chr16 27268575 27268819 + 20.6 0.000 promoter-TSS (NM_145080) promoter-TSS (NM_145080) 75 NM_145080 197370 Hs.284295 NM_145080 ENSG00000169189 NSMCE1 NSE1 NSE1 homolog, SMC5-SMC6 complex component protein-coding chr7-1017 chr7 121961076 121961320 + 20.6 0.000 intron (NM_001206839, intron 2 of 28) intron (NM_001206839, intron 2 of 28) 88037 NM_002851 5803 Hs.489824 NM_002851 ENSG00000106278 PTPRZ1 HPTPZ|HPTPzeta|PTP-ZETA|PTP18|PTPRZ|PTPZ|R-PTP-zeta-2|RPTPB|RPTPbeta|phosphacan protein tyrosine phosphatase receptor type Z1 protein-coding chr1-1917 chr1 209704660 209704904 + 20.6 0.000 promoter-TSS (NM_005525) promoter-TSS (NM_005525) -64 NM_005525 3290 Hs.195040 NM_005525 ENSG00000117594 HSD11B1 11-DH|11-beta-HSD1|CORTRD2|HDL|HSD11|HSD11B|HSD11L|SDR26C1 hydroxysteroid 11-beta dehydrogenase 1 protein-coding chr6-643 chr6 2008361 2008605 + 20.6 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 167508 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr17-363 chr17 81712387 81712631 + 20.6 0.000 exon (NM_001270953, exon 1 of 11) exon (NM_001270953, exon 1 of 11) 225 NM_001270888 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr16-628 chr16 8621981 8622225 + 20.6 0.000 intron (NR_134608, intron 1 of 9) intron (NR_134608, intron 1 of 9) 405 NM_024109 79091 Hs.306380 NM_024109 ENSG00000067365 METTL22 C16orf68 methyltransferase like 22 protein-coding chr2-1567 chr2 231406411 231406655 + 20.6 0.000 Intergenic HERVE-int|LTR|ERV1 10823 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr22-485 chr22 36334207 36334451 + 20.6 0.000 intron (NM_002473, intron 3 of 40) intron (NM_002473, intron 3 of 40) -47422 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr19-629 chr19 20238312 20238556 + 20.6 0.000 Intergenic Intergenic 71220 NM_052852 90649 Hs.590991 NM_052852 ENSG00000256229 ZNF486 KRBO2 zinc finger protein 486 protein-coding chr8-877 chr8 56580845 56581089 + 20.6 0.000 Intergenic Intergenic -21144 NR_038236 100507632 Hs.583755 NR_038236 ENSG00000246430 LINC00968 - long intergenic non-protein coding RNA 968 ncRNA chr15-323 chr15 57395359 57395603 + 20.6 0.000 intron (NM_032866, intron 1 of 18) intron (NM_032866, intron 1 of 18) 18976 NM_001252335 84952 Hs.148989 NM_032866 ENSG00000128849 CGNL1 JACOP|PCING cingulin like 1 protein-coding chr15-459 chr15 40263140 40263384 + 20.6 0.000 intron (NM_001128629, intron 2 of 9) intron (NM_001128629, intron 2 of 9) 10084 NM_001276717 56924 Hs.732375 NM_020168 ENSG00000137843 PAK6 PAK5 p21 (RAC1) activated kinase 6 protein-coding chr22-454 chr22 41667387 41667631 + 20.6 0.000 Intergenic Intergenic 21358 NM_001003796 4809 Hs.182255 NM_005008 ENSG00000100138 SNU13 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 small nuclear ribonucleoprotein 13 protein-coding chrX-311 chrX 77426903 77427147 + 20.6 0.000 Intergenic Intergenic -20364 NM_003868 8823 Hs.666364 NM_003868 ENSG00000196468 FGF16 FGF-16|MF4 fibroblast growth factor 16 protein-coding chr12-394 chr12 7060462 7060706 + 20.6 0.000 promoter-TSS (NM_201442) promoter-TSS (NM_201442) -134 NM_001734 716 Hs.458355 NM_001734 ENSG00000182326 C1S EDSPD2 complement C1s protein-coding chr8-936 chr8 106889090 106889334 + 20.6 0.000 Intergenic Intergenic -118968 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chr13-285 chr13 44734263 44734507 + 20.6 0.000 Intergenic Intergenic 75245 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA chr20-219 chr20 62566107 62566351 + 20.6 0.000 intron (NM_001302812, intron 4 of 4) intron (NM_001302812, intron 4 of 4) 1317 NR_029676 406923 NR_029676 ENSG00000284508 MIR133A2 MIRN133A2|mir-133a-2 microRNA 133a-2 ncRNA chr1-1762 chr1 54125906 54126150 + 20.6 0.000 Intergenic Intergenic 27153 NM_201546 200008 NM_201546 ENSG00000157211 CDCP2 - CUB domain containing protein 2 protein-coding chr9-1310 chr9 122159740 122159984 + 20.6 0.000 promoter-TSS (NM_198469) promoter-TSS (NM_198469) -46 NM_001286828 254956 Hs.71428 NM_198469 ENSG00000185681 MORN5 C9orf113|C9orf18 MORN repeat containing 5 protein-coding chr3-1199 chr3 196016506 196016750 + 20.6 0.000 Intergenic L1ME1|LINE|L1 -26349 NR_003264 255812 Hs.566872 NR_003264 ENSG00000185485 SDHAP1 SDHAL1|SDHALP1 succinate dehydrogenase complex flavoprotein subunit A pseudogene 1 pseudo chr3-568 chr3 33687656 33687900 + 20.6 0.000 intron (NM_001365634, intron 4 of 35) intron (NM_001365634, intron 4 of 35) -28099 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding chr14-230 chr14 103624968 103625212 + 20.6 0.000 Intergenic Intergenic -4098 NM_182923 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr7-793 chr7 139704211 139704455 + 20.6 0.000 intron (NM_001113239, intron 2 of 14) (AC)n|Simple_repeat|Simple_repeat 73665 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr14-367 chr14 68695445 68695689 + 20.6 0.000 Intergenic Intergenic -66780 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA chr13-173 chr13 40272049 40272293 + 20.6 0.000 Intergenic Intergenic -51669 NR_033877 400123 Hs.577960 NR_033877 ENSG00000215483 LINC00548 - long intergenic non-protein coding RNA 548 ncRNA chr2-843 chr2 64330812 64331056 + 20.6 0.000 Intergenic Intergenic -9825 NR_039632 100616265 NR_039632 ENSG00000283222 MIR4433A MIR4433|hsa-mir-4433a microRNA 4433a ncRNA chr15-447 chr15 26087521 26087765 + 20.6 0.000 Intergenic Intergenic -28170 NR_038851 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA chr18-220 chr18 12060134 12060378 + 20.6 0.000 Intergenic REP522|Satellite|telo -33587 NM_001277333 342850 Hs.448906 NM_001277333 ENSG00000181626 ANKRD62 DKFZp779B1634 ankyrin repeat domain 62 protein-coding chr9-772 chr9 32572373 32572617 + 20.6 0.000 intron (NM_182739, intron 1 of 2) intron (NM_182739, intron 1 of 2) 664 NM_182739 4712 Hs.493668 NM_002493 ENSG00000165264 NDUFB6 B17|CI NADH:ubiquinone oxidoreductase subunit B6 protein-coding chr15-419 chr15 41852115 41852359 + 20.6 0.000 exon (NM_016642, exon 62 of 68) exon (NM_016642, exon 62 of 68) 13424 NM_001114633 100137049 Hs.198161 NM_001114633 ENSG00000243708 PLA2G4B HsT16992|cPLA2-beta phospholipase A2 group IVB protein-coding chr5-995 chr5 18698487 18698731 + 20.6 0.000 Intergenic LTR13_|LTR|ERVK 891335 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA chr13-498 chr13 83065290 83065534 + 20.6 0.000 Intergenic Intergenic 816981 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding chr8-988 chr8 142564924 142565168 + 20.6 0.000 Intergenic LTR41|LTR|ERVL 49433 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr12-420 chr12 66169258 66169502 + 20.6 0.000 intron (NM_001282606, intron 1 of 7) intron (NM_001282606, intron 1 of 7) 692 NM_001282606 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding chr19-560 chr19 49128113 49128357 + 20.6 0.000 intron (NR_103842, intron 2 of 28) CpG-14893 8691 NM_003660 8541 Hs.413748 NM_003660 ENSG00000177380 PPFIA3 LPNA3 PTPRF interacting protein alpha 3 protein-coding chr3-1358 chr3 104556681 104556925 + 20.6 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -809910 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding chr7-1191 chr7 2063978 2064222 + 20.6 0.000 intron (NM_001013837, intron 12 of 18) intron (NM_001013837, intron 12 of 18) 24952 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr1-1922 chr1 222712506 222712750 + 20.6 0.000 promoter-TSS (NM_001288579) promoter-TSS (NM_001288579) 64 NR_109927 148362 Hs.534965 NM_144695 ENSG00000162819 BROX C1orf58 BRO1 domain and CAAX motif containing protein-coding chr14-461 chr14 105421868 105422112 + 20.6 0.000 intron (NM_001203258, intron 1 of 20) intron (NM_001203258, intron 1 of 20) 2163 NM_001203258 9112 Hs.525629 NM_004689 ENSG00000182979 MTA1 - metastasis associated 1 protein-coding chr16-202 chr16 85436609 85436853 + 20.6 0.000 Intergenic Intergenic -130406 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr20-262 chr20 32031439 32031683 + 20.6 0.000 3' UTR (NM_001365692, exon 10 of 10) 3' UTR (NM_001365692, exon 10 of 10) -20681 NM_001172129 3055 Hs.655210 NM_002110 ENSG00000101336 HCK JTK9|p59Hck|p61Hck HCK proto-oncogene, Src family tyrosine kinase protein-coding chr12-590 chr12 105977709 105977953 + 20.6 0.000 Intergenic Intergenic 162202 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr16-939 chr16 30998218 30998462 + 20.6 0.000 intron (NM_052874, intron 4 of 9) intron (NM_052874, intron 4 of 9) 12298 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr12-1212 chr12 108561183 108561427 + 20.6 0.000 promoter-TSS (NM_014706) promoter-TSS (NM_014706) -132 NM_014706 9733 Hs.584842 NM_014706 ENSG00000075856 SART3 DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb) spliceosome associated factor 3, U4/U6 recycling protein protein-coding chr20-179 chr20 50112874 50113118 + 20.6 0.000 intron (NM_001282576, intron 1 of 4) CpG 154 NM_001257395 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr4-522 chr4 54103894 54104138 + 20.6 0.000 Intergenic Intergenic 3853 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding chr19-1425 chr19 1334694 1334938 + 20.6 0.000 Intergenic Intergenic -20143 NM_001369797 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr12-438 chr12 104793273 104793517 + 20.6 0.000 Intergenic Intergenic 164895 NM_032148 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr19-333 chr19 40433864 40434108 + 20.6 0.000 Intergenic CpG -7994 NM_013376 29950 Hs.269898 NM_013376 ENSG00000197019 SERTAD1 SEI1|TRIP-Br1|TRIPBR1 SERTA domain containing 1 protein-coding chr1-471 chr1 22711611 22711855 + 20.6 0.000 intron (NM_004442, intron 1 of 15) CpG 894 NM_001309193 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr4-848 chr4 145525292 145525536 + 20.6 0.000 intron (NM_005900, intron 2 of 6) intron (NM_005900, intron 2 of 6) -8220 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA chr1-295 chr1 46668382 46668626 + 20.6 0.000 promoter-TSS (NM_001042546) promoter-TSS (NM_001042546) -77 NM_001042546 64756 Hs.100874 NM_022745 ENSG00000123472 ATPAF1 ATP11|ATP11p ATP synthase mitochondrial F1 complex assembly factor 1 protein-coding chr10-855 chr10 70656553 70656797 + 20.6 0.000 Intergenic MIR3|SINE|MIR -15831 NM_139155 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr3-1223 chr3 13570447 13570691 + 20.6 0.000 exon (NM_001998, exon 2 of 17) exon (NM_001998, exon 2 of 17) 1829 NM_001165035 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr11-925 chr11 70016827 70017071 + 20.6 0.000 Intergenic L2a|LINE|L2 46975 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA chr12-291 chr12 19774825 19775069 + 20.4 0.000 Intergenic L1PB1|LINE|L1 -239738 NR_040098 100506393 Hs.658356 NR_040098 ENSG00000256287 LINC02398 - long intergenic non-protein coding RNA 2398 ncRNA chr9-1368 chr9 132385399 132385643 + 20.4 0.000 intron (NR_134525, intron 9 of 10) intron (NR_134525, intron 9 of 10) 21319 NR_134525 7270 Hs.54780 NM_007344 ENSG00000125482 TTF1 TTF-1|TTF-I transcription termination factor 1 protein-coding chr15-313 chr15 96347170 96347414 + 20.4 0.000 Intergenic Intergenic 13527 NM_001145157 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr13-218 chr13 95301578 95301822 + 20.4 0.000 promoter-TSS (NM_001301829) promoter-TSS (NM_001301829) -249 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr2-1842 chr2 149799333 149799577 + 20.4 0.000 intron (NR_145421, intron 3 of 4) intron (NR_145421, intron 3 of 4) 59736 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA chr4-814 chr4 53188120 53188364 + 20.4 0.000 intron (NM_152540, intron 4 of 8) intron (NM_152540, intron 4 of 8) 177819 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr10-845 chr10 63859870 63860114 + 20.4 0.000 Intergenic Intergenic -338102 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr19-1411 chr19 954845 955089 + 20.4 0.000 intron (NM_005224, intron 3 of 8) intron (NM_005224, intron 3 of 8) 28932 NM_005224 1820 Hs.501296 NM_005224 ENSG00000116017 ARID3A BRIGHT|DRIL1|DRIL3|E2FBP1 AT-rich interaction domain 3A protein-coding chr7-935 chr7 40826594 40826838 + 20.4 0.000 intron (NM_024728, intron 14 of 14) intron (NM_024728, intron 14 of 14) 153223 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA chr11-608 chr11 47177506 47177750 + 20.4 0.000 promoter-TSS (NM_001242832) promoter-TSS (NM_001242832) -503 NM_001242832 84364 Hs.436204 NM_032389 ENSG00000149182 ARFGAP2 IRZ|NBLA10535|ZFP289|ZNF289 ADP ribosylation factor GTPase activating protein 2 protein-coding chr3-670 chr3 129313746 129313990 + 20.4 0.000 TTS (NM_006026) TTS (NM_006026) -2403 NR_026991 339942 Hs.450096 NM_001025468 H1FX-AS1 C3orf47 H1FX antisense RNA 1 ncRNA chr9-1250 chr9 92246194 92246438 + 20.4 0.000 intron (NR_073446, intron 25 of 32) intron (NR_073446, intron 25 of 32) 46231 NR_037424 100500918 NR_037424 ENSG00000281156 MIR3651 mir-3651 microRNA 3651 ncRNA chr17-346 chr17 57946966 57947210 + 20.4 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 8324 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr8-629 chr8 48514453 48514697 + 20.4 0.000 Intergenic CpG -36992 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA chr15-367 chr15 49247599 49247843 + 20.4 0.000 intron (NM_001289030, intron 6 of 10) intron (NM_001289030, intron 6 of 10) 77474 NR_147895 2585 Hs.122006 NM_002044 ENSG00000156958 GALK2 GK2 galactokinase 2 protein-coding chr17-812 chr17 78986205 78986449 + 20.4 0.000 Intergenic MER44D|DNA|TcMar-Tigger -6404 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding chr1-1388 chr1 147670367 147670611 + 20.4 0.000 promoter-TSS (NR_136636) promoter-TSS (NR_136636) 35 NR_136636 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding chr9-436 chr9 119453553 119453797 + 20.4 0.000 Intergenic Intergenic -84240 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr11-709 chr11 19596120 19596364 + 20.4 0.000 intron (NM_001111018, intron 1 of 37) intron (NM_001111018, intron 1 of 37) 20932 NR_039706 100616118 NR_039706 ENSG00000265210 MIR4486 - microRNA 4486 ncRNA chr3-555 chr3 11137435 11137679 + 20.4 0.000 intron (NM_001098213, intron 1 of 1) intron (NM_001098213, intron 1 of 1) 319 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding chr1-966 chr1 205493333 205493577 + 20.4 0.000 Intergenic Intergenic -11214 NM_212502 5129 Hs.445402 NM_002596 ENSG00000117266 CDK18 PCTAIRE|PCTAIRE3|PCTK3 cyclin dependent kinase 18 protein-coding chr1-1655 chr1 11523859 11524103 + 20.4 0.000 exon (NM_020780, exon 11 of 21) exon (NM_020780, exon 11 of 21) 44826 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr4-608 chr4 97199492 97199736 + 20.4 0.000 Intergenic Intergenic -167312 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA chr3-465 chr3 24937459 24937703 + 20.4 0.000 intron (NM_001290216, intron 2 of 10) intron (NM_001290216, intron 2 of 10) 108258 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr17-1132 chr17 40008307 40008551 + 20.4 0.000 Intergenic AluJr|SINE|Alu -7011 NM_172219 1440 Hs.2233 NM_000759 ENSG00000108342 CSF3 C17orf33|CSF3OS|GCSF colony stimulating factor 3 protein-coding chr2-1186 chr2 7847727 7847971 + 20.4 0.000 Intergenic Intergenic 51806 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA chr7-639 chr7 76322861 76323105 + 20.4 0.000 Intergenic Intergenic 20310 NM_001540 3315 Hs.520973 NM_001540 ENSG00000106211 HSPB1 CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27 heat shock protein family B (small) member 1 protein-coding chr7-1343 chr7 96952991 96953235 + 20.4 0.000 Intergenic Intergenic -52440 NM_005222 1750 Hs.249196 NM_005222 ENSG00000006377 DLX6 - distal-less homeobox 6 protein-coding chr10-1287 chr10 115772723 115772967 + 20.4 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 421944 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr5-586 chr5 68319432 68319676 + 20.4 0.000 Intergenic Intergenic 26977 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr13-339 chr13 74135193 74135437 + 20.4 0.000 Intergenic CpG -1386 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chr7-1035 chr7 138461191 138461435 + 20.4 0.000 intron (NM_003852, intron 1 of 18) intron (NM_003852, intron 1 of 18) 1054 NM_003852 8805 Hs.490287 NM_003852 ENSG00000122779 TRIM24 PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 tripartite motif containing 24 protein-coding chr1-1698 chr1 26787898 26788142 + 20.4 0.000 promoter-TSS (NM_017837) promoter-TSS (NM_017837) 57 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chrX-504 chrX 100636655 100636899 + 20.4 0.000 promoter-TSS (NM_003270) promoter-TSS (NM_003270) 29 NM_001278740 7105 Hs.43233 NM_003270 ENSG00000000003 TSPAN6 T245|TM4SF6|TSPAN-6 tetraspanin 6 protein-coding chr11-1113 chr11 61695725 61695969 + 20.4 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) 15456 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr1-2454 chr1 95134325 95134569 + 20.4 0.000 intron (NM_001199691, intron 1 of 7) L2b|LINE|L2 16524 NM_001199691 100527978 Hs.483512 NM_001199691 ENSG00000271092 TLCD4-RWDD3 TMEM56-RWDD3 TLCD4-RWDD3 readthrough protein-coding chr9-599 chr9 88989185 88989429 + 20.4 0.000 Intergenic L1MC5a|LINE|L1 -1556 NM_001142413 286223 Hs.585118 NM_001001938 ENSG00000213694 C9orf47 C9orf108|bA791O21.3 chromosome 9 open reading frame 47 protein-coding chr9-460 chr9 137114735 137114979 + 20.4 0.000 promoter-TSS (NM_013379) promoter-TSS (NM_013379) -124 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr3-1225 chr3 14329460 14329704 + 20.4 0.000 Intergenic Intergenic 22986 NR_110135 101927565 Hs.306905 NR_110135 ENSG00000251576 LINC01267 - long intergenic non-protein coding RNA 1267 ncRNA chr1-1376 chr1 109090681 109090925 + 20.4 0.000 promoter-TSS (NR_136243) promoter-TSS (NR_136243) 39 NR_136242 56900 Hs.82933 NM_020141 ENSG00000215717 TMEM167B AD-020|C1orf119 transmembrane protein 167B protein-coding chr15-190 chr15 82045809 82046053 + 20.4 0.000 promoter-TSS (NM_032246) promoter-TSS (NM_032246) 87 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr20-183 chr20 61253437 61253681 + 20.4 0.000 intron (NM_001794, intron 1 of 15) CpG 1298 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr1-2665 chr1 228357002 228357246 + 20.4 0.000 intron (NM_052843, intron 80 of 80) MIR3|SINE|MIR 39985 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr7-744 chr7 71633661 71633905 + 20.4 0.000 intron (NM_022479, intron 6 of 10) intron (NM_022479, intron 6 of 10) -326013 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA chr1-1508 chr1 42742859 42743103 + 20.4 0.000 Intergenic MIRc|SINE|MIR -2727 NM_001185117 149461 Hs.496270 NM_148960 ENSG00000164007 CLDN19 HOMG5 claudin 19 protein-coding chr3-779 chr3 143158469 143158713 + 20.4 0.000 Intergenic Intergenic 38820 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding chr3-1233 chr3 23430883 23431127 + 20.4 0.000 intron (NM_001370225, intron 3 of 5) MER5A|DNA|hAT-Charlie 227678 NM_152653 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding chr3-854 chr3 108472111 108472355 + 20.4 0.000 intron (NM_014981, intron 13 of 41) intron (NM_014981, intron 13 of 41) 57089 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr9-1367 chr9 131499668 131499912 + 20.4 0.000 3' UTR (NM_013318, exon 31 of 31) 3' UTR (NM_013318, exon 31 of 31) -3112 NM_007171 10585 Hs.522449 NM_007171 ENSG00000130714 POMT1 LGMD2K|LGMDR11|MDDGA1|MDDGB1|MDDGC1|RT protein O-mannosyltransferase 1 protein-coding chr9-1260 chr9 95462431 95462675 + 20.4 0.000 intron (NM_000264, intron 15 of 23) intron (NM_000264, intron 15 of 23) -1056 NR_038982 100507346 Hs.661847 NR_038982 LOC100507346 - uncharacterized LOC100507346 ncRNA chr5-1036 chr5 56698331 56698575 + 20.4 0.000 Intergenic Intergenic 74418 NM_001365184 105378979 NM_001365184 LOC105378979 - growth/differentiation factor 3 protein-coding chr19-1580 chr19 34392658 34392902 + 20.4 0.000 intron (NM_001329910, intron 10 of 18) intron (NM_001329910, intron 10 of 18) -11618 NM_001353433 84306 Hs.515344 NM_032346 ENSG00000126249 PDCD2L - programmed cell death 2 like protein-coding chr12-639 chr12 49088270 49088514 + 20.4 0.000 3' UTR (NM_021044, exon 3 of 3) 3' UTR (NM_021044, exon 3 of 3) 6409 NM_021044 50846 Hs.524382 NM_021044 ENSG00000139549 DHH GDXYM|HHG-3|SRXY7 desert hedgehog signaling molecule protein-coding chr5-724 chr5 14580663 14580907 + 20.4 0.000 Intergenic MIR|SINE|MIR -1007 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding chr3-1455 chr3 159733662 159733906 + 20.4 0.000 intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 34828 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr10-285 chr10 14953915 14954159 + 20.4 0.000 promoter-TSS (NR_146961) promoter-TSS (NR_146961) 59 NM_001289078 64421 Hs.655932 NM_022487 ENSG00000152457 DCLRE1C A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C DNA cross-link repair 1C protein-coding chr2-821 chr2 241464312 241464556 + 20.4 0.000 intron (NM_014808, intron 17 of 26) intron (NM_014808, intron 17 of 26) -13471 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr17-394 chr17 8383466 8383710 + 20.4 0.000 promoter-TSS (NM_001315530) promoter-TSS (NM_001315530) -395 NM_001315531 6154 Hs.482144 NM_000987 ENSG00000161970 RPL26 DBA11|L26 ribosomal protein L26 protein-coding chr11-1478 chr11 46378624 46378868 + 20.4 0.000 intron (NM_201533, intron 27 of 30) intron (NM_201533, intron 27 of 30) -2038 NM_001270550 4192 Hs.82045 NM_002391 ENSG00000110492 MDK ARAP|MK|NEGF2 midkine protein-coding chr4-744 chr4 125849884 125850128 + 20.4 0.000 Intergenic L2|LINE|L2 342747 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr4-1090 chr4 154004043 154004287 + 20.4 0.000 Intergenic Intergenic -215082 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr7-700 chr7 14836578 14836822 + 20.4 0.000 intron (NM_001350717, intron 2 of 24) intron (NM_001350717, intron 2 of 24) 4750 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding chr1-1592 chr1 228903099 228903343 + 20.4 0.000 Intergenic Intergenic 167742 NM_021205 58480 Hs.647774 NM_021205 ENSG00000116574 RHOU ARHU|CDC42L1|G28K|WRCH1|hG28K ras homolog family member U protein-coding chr3-1101 chr3 16034068 16034312 + 20.4 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 -140490 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr22-378 chr22 24554290 24554534 + 20.4 0.000 intron (NM_001284252, intron 1 of 5) intron (NM_001284252, intron 1 of 5) 726 NM_031444 83606 Hs.9850 NM_031444 ENSG00000138867 GUCD1 C22orf13|LLN4 guanylyl cyclase domain containing 1 protein-coding chr7-529 chr7 129969868 129970112 + 20.4 0.000 Intergenic Intergenic -17030 NM_003344 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding KI270866.1-1 KI270866.1 41723 41967 + 20.4 0.000 NA NA NA NA chr1-2585 chr1 185670361 185670605 + 20.4 0.000 Intergenic Intergenic -41995 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA chr1-2559 chr1 170742140 170742384 + 20.4 0.000 Intergenic THE1B|LTR|ERVL-MaLR 78131 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr17-742 chr17 8151625 8151869 + 20.4 0.000 intron (NM_002616, intron 1 of 22) CpG 657 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian regulator 1 protein-coding chr3-782 chr3 146953510 146953754 + 20.4 0.000 Intergenic Intergenic 31709 NR_135561 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA chr14-211 chr14 50116477 50116721 + 20.4 0.000 promoter-TSS (NM_001040662) promoter-TSS (NM_001040662) -27 NR_049738 79609 Hs.558541 NM_024558 ENSG00000100483 VCPKMT C14orf138|METTL21D|VCP-KMT valosin containing protein lysine methyltransferase protein-coding chr3-1434 chr3 142828758 142829002 + 20.4 0.000 intron (NM_013363, intron 6 of 8) intron (NM_013363, intron 6 of 8) 60203 NM_013363 26577 Hs.8944 NM_013363 ENSG00000163710 PCOLCE2 PCPE2 procollagen C-endopeptidase enhancer 2 protein-coding chr1-1046 chr1 84574003 84574247 + 20.4 0.000 intron (NM_004388, intron 1 of 6) intron (NM_004388, intron 1 of 6) 315 NM_004388 1486 Hs.513557 NM_004388 ENSG00000117151 CTBS CTB chitobiase protein-coding chr2-339 chr2 74002628 74002872 + 20.4 0.000 promoter-TSS (NM_001366022) promoter-TSS (NM_001366022) 58 NM_001366022 200424 Hs.208546 NM_001287491 ENSG00000187605 TET3 hCG_40738 tet methylcytosine dioxygenase 3 protein-coding chr10-857 chr10 70722904 70723148 + 20.4 0.000 intron (NM_080722, intron 4 of 21) L1MC3|LINE|L1 50520 NM_080722 140766 Hs.352156 NM_080722 ENSG00000138316 ADAMTS14 - ADAM metallopeptidase with thrombospondin type 1 motif 14 protein-coding chr12-888 chr12 106251690 106251934 + 20.4 0.000 Intergenic Intergenic -3792 NM_006825 10970 Hs.74368 NM_006825 ENSG00000136026 CKAP4 CLIMP-63|ERGIC-63|p63 cytoskeleton associated protein 4 protein-coding chr1-1880 chr1 178109446 178109690 + 20.4 0.000 intron (NM_170692, intron 1 of 17) Charlie13a|DNA|hAT-Charlie 15464 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr14-353 chr14 20971427 20971671 + 20.4 0.000 Intergenic CpG 16062 NM_002934 6036 Hs.728 NM_002934 ENSG00000169385 RNASE2 EDN|RAF3|RNS2 ribonuclease A family member 2 protein-coding chr2-431 chr2 240840531 240840775 + 20.4 0.000 Intergenic Intergenic -20345 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr11-1193 chr11 85810979 85811223 + 20.4 0.000 promoter-TSS (NM_001289608) promoter-TSS (NM_001289608) 40 NM_206927 54843 Hs.369520 NM_032379 ENSG00000137501 SYTL2 CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A synaptotagmin like 2 protein-coding chr5-288 chr5 103562576 103562820 + 20.4 0.000 promoter-TSS (NM_031438) promoter-TSS (NM_031438) 91 NM_001300741 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding chr7-617 chr7 7566980 7567224 + 20.4 0.000 promoter-TSS (NM_001370078) promoter-TSS (NM_001370078) 218 NM_019005 54468 Hs.520215 NM_019005 ENSG00000164654 MIOS MIO|Sea4|Yulink meiosis regulator for oocyte development protein-coding chr2-1297 chr2 113886402 113886646 + 20.4 0.000 intron (NR_110174, intron 1 of 4) intron (NR_110174, intron 1 of 4) -3410 NR_102318 10096 Hs.433512 NM_005721 ENSG00000115091 ACTR3 ARP3 actin related protein 3 protein-coding chr19-882 chr19 43544221 43544465 + 20.4 0.000 intron (NM_006297, intron 14 of 16) intron (NM_006297, intron 14 of 16) 11155 NM_174945 284346 Hs.213534 NM_174945 ENSG00000176472 ZNF575 - zinc finger protein 575 protein-coding chr20-408 chr20 17747340 17747584 + 20.4 0.000 Intergenic Intergenic 47514 NM_178477 140836 Hs.115366 NM_178477 ENSG00000125888 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding chr1-1064 chr1 118987281 118987525 + 20.4 0.000 intron (NM_152380, intron 1 of 7) CpG 940 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding chr20-239 chr20 62010999 62011243 + 20.4 0.000 intron (NM_003185, intron 3 of 14) intron (NM_003185, intron 3 of 14) -53681 NR_130463 100422838 NR_130463 ENSG00000265306 MIR3195 - microRNA 3195 ncRNA chr13-349 chr13 90266062 90266306 + 20.4 0.000 Intergenic Intergenic 35002 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr7-715 chr7 38870208 38870452 + 20.4 0.000 intron (NM_014396, intron 2 of 28) L1MEg|LINE|L1 38861 NM_014396 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr2-945 chr2 56260381 56260625 + 20.4 0.000 intron (NM_001348516, intron 2 of 2) intron (NM_001348516, intron 2 of 2) -74733 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA chr5-828 chr5 157571603 157571847 + 20.4 0.000 intron (NM_033274, intron 1 of 22) L2a|LINE|L2 4050 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr7-989 chr7 85773336 85773580 + 20.4 0.000 Intergenic Intergenic 352336 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr10-527 chr10 91633083 91633327 + 20.4 0.000 promoter-TSS (NM_005398) promoter-TSS (NM_005398) -134 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding chr7-726 chr7 44449557 44449801 + 20.4 0.000 intron (NM_015332, intron 2 of 5) L1ME1|LINE|L1 40979 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr2-1575 chr2 236871441 236871685 + 20.4 0.000 Intergenic Intergenic 184604 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr9-314 chr9 133998042 133998286 + 20.4 0.000 Intergenic Intergenic -5840 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr15-183 chr15 68278308 68278552 + 20.4 0.000 exon (NM_015322, exon 1 of 2) exon (NM_015322, exon 1 of 2) 685 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr10-1251 chr10 100184718 100184962 + 20.4 0.000 intron (NR_144760, intron 2 of 10) intron (NR_144760, intron 2 of 10) 1189 NM_001347856 10613 Hs.150087 NM_006459 ENSG00000107566 ERLIN1 C10orf69|Erlin-1|KE04|KEO4|SPFH1|SPG62 ER lipid raft associated 1 protein-coding chr2-1549 chr2 206765047 206765291 + 20.4 0.000 promoter-TSS (NM_001136194) promoter-TSS (NM_001136194) 159 NM_001039845 130752 Hs.147816 NM_206892 ENSG00000138400 MDH1B RP11-95H11 malate dehydrogenase 1B protein-coding chr11-456 chr11 15941378 15941622 + 20.4 0.000 Intergenic CpG 28121 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr17-1393 chr17 73068402 73068646 + 20.4 0.000 intron (NM_001352692, intron 3 of 9) intron (NM_001352692, intron 3 of 9) 24164 NM_001352691 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr22-475 chr22 26645433 26645677 + 20.4 0.000 Intergenic Intergenic -11927 NR_033319 440823 Hs.517502 NR_003491 ENSG00000225783 MIAT C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT myocardial infarction associated transcript ncRNA chr1-1529 chr1 89262647 89262891 + 20.3 0.000 exon (NM_052942, exon 10 of 12) exon (NM_052942, exon 10 of 12) 10091 NM_001134486 115362 Hs.513726 NM_052942 ENSG00000154451 GBP5 GBP-5 guanylate binding protein 5 protein-coding chr14-509 chr14 31070445 31070689 + 20.3 0.000 intron (NM_001128126, intron 3 of 5) intron (NM_001128126, intron 3 of 5) 43924 NM_001254728 11154 Hs.293411 NM_007077 ENSG00000100478 AP4S1 AP47B|CLA20|CLAPS4|CPSQ6|SPG52 adaptor related protein complex 4 subunit sigma 1 protein-coding chr3-1156 chr3 130850242 130850486 + 20.3 0.000 promoter-TSS (NM_001199180) promoter-TSS (NM_001199180) -231 NM_001199180 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr15-737 chr15 89836563 89836807 + 20.3 0.000 intron (NR_023361, intron 6 of 6) intron (NR_023361, intron 6 of 6) 14036 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA chr3-1174 chr3 157290740 157290984 + 20.3 0.000 intron (NM_001167911, intron 10 of 12) intron (NM_001167911, intron 10 of 12) -130102 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr14-764 chr14 88554427 88554671 + 20.3 0.000 intron (NM_007039, intron 1 of 18) CpG 458 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding chr7-227 chr7 66075672 66075916 + 20.3 0.000 promoter-TSS (NM_001024944) promoter-TSS (NM_001024944) -25 NM_000048 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr1-1356 chr1 78229462 78229706 + 20.3 0.000 promoter-TSS (NR_027310) promoter-TSS (NR_027310) -15 NR_027310 149047 Hs.352665 NM_144700 ENSG00000237413 MGC27382 - uncharacterized MGC27382 ncRNA chr14-241 chr14 69767619 69767863 + 20.3 0.000 promoter-TSS (NR_029378) promoter-TSS (NR_029378) -28 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr22-231 chr22 50244832 50245076 + 20.3 0.000 promoter-TSS (NM_020461) promoter-TSS (NM_020461) 69 NM_020461 85378 Hs.336431 NM_020461 ENSG00000128159 TUBGCP6 GCP-6|GCP6|MCCRP|MCCRP1|MCPHCR tubulin gamma complex associated protein 6 protein-coding chr7-264 chr7 32943010 32943254 + 20.3 0.000 promoter-TSS (NR_003500) promoter-TSS (NR_003500) 38 NR_003500 441212 Hs.648086 NM_001039754 ENSG00000205763 RP9P - RP9 pseudogene pseudo chr6-495 chr6 16205391 16205635 + 20.3 0.000 Intergenic Intergenic -33074 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr22-210 chr22 37807763 37808007 + 20.3 0.000 promoter-TSS (NM_001171690) promoter-TSS (NM_001171690) -20 NM_014291 23464 Hs.54609 NM_014291 ENSG00000100116 GCAT KBL glycine C-acetyltransferase protein-coding chr17-1071 chr17 81471012 81471256 + 20.3 0.000 Intergenic Intergenic -19946 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr19-1558 chr19 19100886 19101130 + 20.3 0.000 intron (NM_178526, intron 2 of 7) intron (NM_178526, intron 2 of 7) 37014 NM_001321544 284439 Hs.303669 NM_178526 ENSG00000181035 SLC25A42 MECREN solute carrier family 25 member 42 protein-coding chr2-750 chr2 64644825 64645069 + 20.3 0.000 intron (NM_014755, intron 1 of 1) intron (NM_014755, intron 1 of 1) 8966 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr20-264 chr20 34216132 34216376 + 20.3 0.000 Intergenic CpG -44111 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr3-1005 chr3 123499502 123499746 + 20.3 0.000 intron (NM_001329786, intron 5 of 5) intron (NM_001329786, intron 5 of 5) -51079 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr13-144 chr13 51896391 51896635 + 20.3 0.000 Intergenic Intergenic 34544 NM_031290 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding chr16-696 chr16 975463 975707 + 20.3 0.000 TTS (NR_036442) TTS (NR_036442) -4586 NM_022773 64788 Hs.71912 NM_022773 ENSG00000103227 LMF1 C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A lipase maturation factor 1 protein-coding chr10-633 chr10 43455648 43455892 + 20.3 0.000 intron (NM_001355444, intron 1 of 3) CpG 18659 NM_001355444 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding chr2-1177 chr2 241200330 241200574 + 20.3 0.000 intron (NM_001370694, intron 6 of 24) CpG 11775 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr2-592 chr2 25673163 25673407 + 20.3 0.000 intron (NM_033147, intron 1 of 19) CpG 292 NM_001351391 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr21-111 chr21 46049459 46049703 + 20.3 0.000 Intergenic Intergenic -48531 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr10-203 chr10 96586701 96586945 + 20.3 0.000 exon (NM_020123, exon 1 of 15) exon (NM_020123, exon 1 of 15) 189 NM_020123 56889 Hs.500674 NM_020123 ENSG00000077147 TM9SF3 EP70-P-iso|SMBP transmembrane 9 superfamily member 3 protein-coding chr19-1311 chr19 1162555 1162799 + 20.3 0.000 intron (NM_014963, intron 1 of 31) intron (NM_014963, intron 1 of 31) 11591 NM_014963 22904 Hs.408708 NM_014963 ENSG00000064932 SBNO2 KIAA0963|SNO|STNO strawberry notch homolog 2 protein-coding chr12-1138 chr12 57452972 57453216 + 20.3 0.000 Intergenic Intergenic -2213 NM_031479 83729 Hs.632713 NM_031479 ENSG00000139269 INHBE - inhibin subunit beta E protein-coding chrX-381 chrX 70479106 70479350 + 20.3 0.000 exon (NM_021120, exon 10 of 19) exon (NM_021120, exon 10 of 19) -23234 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA chr7-834 chr7 44964619 44964863 + 20.3 0.000 intron (NM_033054, intron 18 of 21) intron (NM_033054, intron 18 of 21) 14274 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr10-612 chr10 5684556 5684800 + 20.3 0.000 promoter-TSS (NM_001321785) promoter-TSS (NM_001321785) -160 NM_001321784 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr8-287 chr8 23398868 23399112 + 20.3 0.000 intron (NM_002318, intron 1 of 13) intron (NM_002318, intron 1 of 13) 5130 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr12-862 chr12 78050853 78051097 + 20.3 0.000 exon (NM_014903, exon 11 of 39) exon (NM_014903, exon 11 of 39) 220081 NM_014903 89795 Hs.655301 NM_014903 ENSG00000067798 NAV3 POMFIL1|STEERIN3|unc53H3 neuron navigator 3 protein-coding chr9-1103 chr9 115006799 115007043 + 20.3 0.000 Intergenic Intergenic -76326 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr16-852 chr16 72372649 72372893 + 20.3 0.000 intron (NR_126330, intron 7 of 13) intron (NR_126330, intron 7 of 13) -200321 NM_001160213 83449 Hs.714939 NM_031293 ENSG00000118557 PMFBP1 SPGF31|STAP polyamine modulated factor 1 binding protein 1 protein-coding chr16-907 chr16 727743 727987 + 20.3 0.000 intron (NM_001290137, intron 2 of 8) CpG 759 NM_001323635 84264 Hs.124015 NM_032304 ENSG00000103253 HAGHL - hydroxyacylglutathione hydrolase like protein-coding chr9-852 chr9 11424890 11425134 + 20.3 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR 811806 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA chr2-940 chr2 47094562 47094806 + 20.3 0.000 intron (NM_001163561, intron 5 of 6) intron (NM_001163561, intron 5 of 6) 60624 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr2-1015 chr2 196925688 196925932 + 20.3 0.000 intron (NM_001321099, intron 1 of 27) intron (NM_001321099, intron 1 of 27) 897 NM_024989 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding chr1-853 chr1 91582628 91582872 + 20.3 0.000 Intergenic Intergenic 81642 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr19-1231 chr19 35000709 35000953 + 20.3 0.000 intron (NM_001320034, intron 1 of 18) CpG 508 NM_001320035 57655 Hs.515351 NM_020895 ENSG00000089351 GRAMD1A KIAA1533 GRAM domain containing 1A protein-coding chr10-774 chr10 420785 421029 + 20.3 0.000 intron (NM_014974, intron 5 of 36) intron (NM_014974, intron 5 of 36) -207657 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr16-406 chr16 88698269 88698513 + 20.3 0.000 intron (NM_178841, intron 5 of 5) intron (NM_178841, intron 5 of 5) 5190 NM_001171816 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr1-782 chr1 171485700 171485944 + 20.3 0.000 intron (NM_015172, intron 1 of 33) CpG 292 NM_015172 23215 Hs.494614 NM_015172 ENSG00000117523 PRRC2C BAT2-iso|BAT2D1|BAT2L2|XTP2 proline rich coiled-coil 2C protein-coding chr9-997 chr9 133135494 133135738 + 20.3 0.000 intron (NM_001042368, intron 1 of 17) MIRb|SINE|MIR -4459 NM_001271774 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr19-664 chr19 3990123 3990367 + 20.3 0.000 Intergenic Intergenic -4782 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr3-448 chr3 111999139 111999383 + 20.3 0.000 5' UTR (NM_001008273, exon 1 of 4) 5' UTR (NM_001008273, exon 1 of 4) 101 NM_001008273 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding chr3-1194 chr3 194593341 194593585 + 20.3 0.000 intron (NM_138399, intron 9 of 10) intron (NM_138399, intron 9 of 10) 9195 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr22-383 chr22 29380526 29380770 + 20.3 0.000 intron (NM_001166019, intron 1 of 20) L2a|LINE|L2 7922 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr6-582 chr6 6724517 6724761 + 20.3 0.000 Intergenic Intergenic -101813 NR_026970 285780 Hs.655737 NM_173675 ENSG00000216863 LY86-AS1 LY86-AS|LY86AS LY86 antisense RNA 1 ncRNA chr10-342 chr10 119555417 119555661 + 20.3 0.000 Intergenic Intergenic -12820 NM_001005339 6001 Hs.501200 NM_002925 ENSG00000148908 RGS10 - regulator of G protein signaling 10 protein-coding chr7-1219 chr7 7157902 7158146 + 20.3 0.000 Intergenic Intergenic -24591 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr15-209 chr15 90529908 90530152 + 20.3 0.000 5' UTR (NM_022769, exon 1 of 15) 5' UTR (NM_022769, exon 1 of 15) 107 NM_022769 64784 Hs.567572 NM_022769 ENSG00000140577 CRTC3 TORC-3|TORC3 CREB regulated transcription coactivator 3 protein-coding chr17-974 chr17 42858786 42859030 + 20.3 0.000 TTS (NM_001277732) TTS (NM_001277732) 5665 NM_001277732 8639 Hs.198241 NM_003734 ENSG00000131471 AOC3 HPAO|SSAO|VAP-1|VAP1 amine oxidase copper containing 3 protein-coding chr7-462 chr7 47383077 47383321 + 20.3 0.000 intron (NM_022748, intron 16 of 30) L1MB7|LINE|L1 81604 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr7-823 chr7 7110831 7111075 + 20.3 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -14167 NR_034022 100131257 Hs.551110 NR_034022 LOC100131257 - zinc finger protein 655 pseudogene pseudo chr14-435 chr14 89619150 89619394 + 20.3 0.000 promoter-TSS (NM_001085471) promoter-TSS (NM_001085471) -107 NM_001085471 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr6-700 chr6 87661086 87661330 + 20.3 0.000 intron (NM_181837, intron 16 of 19) intron (NM_181837, intron 16 of 19) 41025 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr6-891 chr6 3749324 3749568 + 20.3 0.000 intron (NM_183373, intron 1 of 4) intron (NM_183373, intron 1 of 4) 2566 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr17-373 chr17 46923253 46923497 + 20.3 0.000 5' UTR (NM_001363851, exon 1 of 6) 5' UTR (NM_001363851, exon 1 of 6) 215 NR_148351 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr1-2252 chr1 16063563 16063807 + 20.3 0.000 intron (NM_182623, intron 1 of 6) intron (NM_182623, intron 1 of 6) 9966 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr2-1692 chr2 47071959 47072203 + 20.3 0.000 intron (NM_001288951, intron 20 of 20) intron (NM_001288951, intron 20 of 20) 83227 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr5-1064 chr5 87113929 87114173 + 20.3 0.000 TTS (NR_036243) TTS (NR_036243) 903 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA chr16-1130 chr16 57148270 57148514 + 20.3 0.000 TTS (NM_152727) TTS (NM_152727) 34158 NM_001354099 80011 Hs.396740 NM_024946 ENSG00000172775 FAM192A C16orf94|CDA018|CDA10|NIP30|PIP30 family with sequence similarity 192 member A protein-coding chr9-684 chr9 121074244 121074488 + 20.3 0.000 promoter-TSS (NM_001369896) promoter-TSS (NM_001369896) 499 NM_001317163 727 Hs.494997 NM_001735 ENSG00000106804 C5 C5D|C5a|C5b|CPAMD4|ECLZB complement C5 protein-coding chr9-711 chr9 129103169 129103413 + 20.3 0.000 intron (NM_001346547, intron 3 of 13) intron (NM_001346547, intron 3 of 13) 7502 NM_000755 1384 Hs.12068 NM_000755 ENSG00000095321 CRAT CAT|CAT1|NBIA8 carnitine O-acetyltransferase protein-coding chr10-1189 chr10 72316035 72316279 + 20.3 0.000 Intergenic MIR|SINE|MIR 38762 NR_157570 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr17-1051 chr17 77875000 77875244 + 20.3 0.000 Intergenic Intergenic 8965 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr2-1339 chr2 176577626 176577870 + 20.3 0.000 Intergenic Intergenic 23304 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA chr1-2568 chr1 175369220 175369464 + 20.3 0.000 intron (NM_003285, intron 9 of 22) MLT1C|LTR|ERVL-MaLR -176355 NM_001162894 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding chr16-1190 chr16 82653570 82653814 + 20.3 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 26723 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr5-511 chr5 177503836 177504080 + 20.3 0.000 3' UTR (NM_001308236, exon 6 of 6) 3' UTR (NM_001308236, exon 6 of 6) 5899 NM_001308236 79930 Hs.720849 NM_024872 ENSG00000146094 DOK3 DOKL docking protein 3 protein-coding chr5-1075 chr5 102760735 102760979 + 20.3 0.000 intron (NR_157231, intron 1 of 14) intron (NR_157231, intron 1 of 14) 5552 NM_001364588 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr3-1428 chr3 141192328 141192572 + 20.3 0.000 Intergenic Intergenic -39375 NM_001037172 92370 Hs.657887 NM_152282 ENSG00000155893 PXYLP1 ACPL2|HEL124|XYLP 2-phosphoxylose phosphatase 1 protein-coding chr8-246 chr8 129939386 129939630 + 20.3 0.000 intron (NM_001353256, intron 2 of 13) CpG 303 NM_001353297 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr3-133 chr3 12967705 12967949 + 20.3 0.000 promoter-TSS (NM_014869) promoter-TSS (NM_014869) -97 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3-845 chr3 59540317 59540561 + 20.3 0.000 Intergenic Intergenic 118058 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr17-1168 chr17 72640781 72641025 + 20.3 0.000 promoter-TSS (NR_033876) promoter-TSS (NR_033876) -431 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA chr4-679 chr4 26023075 26023319 + 20.3 0.000 Intergenic Intergenic 109005 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr4-1108 chr4 174553880 174554124 + 20.3 0.000 Intergenic Intergenic -31104 NM_001256305 3248 Hs.596913 NM_000860 ENSG00000164120 HPGD 15-PGDH|PGDH|PGDH1|PHOAR1|SDR36C1 15-hydroxyprostaglandin dehydrogenase protein-coding chr7-508 chr7 44087999 44088243 + 20.3 0.000 Intergenic Intergenic -5581 NR_156113 27434 Hs.596982 NM_013284 ENSG00000122678 POLM Pol Mu|Tdt-N DNA polymerase mu protein-coding chr1-2416 chr1 79259809 79260053 + 20.3 0.000 Intergenic Intergenic -253201 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr11-1278 chr11 44362569 44362813 + 20.3 0.000 Intergenic Intergenic -52552 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr16-466 chr16 1442243 1442487 + 20.3 0.000 intron (NM_001143980, intron 6 of 16) intron (NM_001143980, intron 6 of 16) 2124 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr4-1102 chr4 168921841 168922085 + 20.3 0.000 intron (NM_001367567, intron 8 of 11) intron (NM_001367567, intron 8 of 11) 88292 NM_032783 84869 Hs.659311 NM_032783 ENSG00000145439 CBR4 SDR45C1 carbonyl reductase 4 protein-coding chr9-566 chr9 136058256 136058500 + 20.3 0.000 intron (NM_144653, intron 1 of 5) intron (NM_144653, intron 1 of 5) 36911 NM_144653 138151 Hs.112895 NM_144653 ENSG00000148411 NACC2 BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB NACC family member 2 protein-coding chr20-543 chr20 18632311 18632555 + 20.3 0.000 3' UTR (NM_001318043, exon 5 of 5) 3' UTR (NM_001318043, exon 5 of 5) 44379 NM_080820 92675 Hs.659442 NM_080820 ENSG00000125821 DTD1 C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68 D-aminoacyl-tRNA deacylase 1 protein-coding chrX-531 chrX 119290728 119290972 + 20.3 0.000 promoter-TSS (NR_110396) promoter-TSS (NR_110396) -679 NR_110396 101928336 NR_110396 ENSG00000230392 LOC101928336 - uncharacterized LOC101928336 ncRNA chr11-1375 chr11 350640 350884 + 20.3 0.000 Intergenic MER41-int|LTR|ERV1 -18737 NM_178537 338707 Hs.148074 NM_178537 ENSG00000182272 B4GALNT4 - beta-1,4-N-acetyl-galactosaminyltransferase 4 protein-coding chr5-1060 chr5 76999495 76999739 + 20.3 0.000 Intergenic Intergenic -30787 NM_018046 55109 Hs.634849 NM_018046 ENSG00000164252 AGGF1 GPATC7|GPATCH7|HSU84971|HUS84971|VG5Q angiogenic factor with G-patch and FHA domains 1 protein-coding chr5-934 chr5 142287607 142287851 + 20.3 0.000 Intergenic Intergenic 30593 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr20-121 chr20 41136845 41137089 + 20.3 0.000 promoter-TSS (NM_002660) promoter-TSS (NM_002660) -576 NM_002660 5335 Hs.268177 NM_002660 ENSG00000124181 PLCG1 NCKAP3|PLC-II|PLC1|PLC148|PLCgamma1 phospholipase C gamma 1 protein-coding chr7-1382 chr7 112162070 112162314 + 20.3 0.000 intron (NM_001363540, intron 1 of 52) intron (NM_001363540, intron 1 of 52) 44207 NM_001363540 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding chr20-377 chr20 47392104 47392348 + 20.3 0.000 intron (NR_146496, intron 2 of 2) MLT1J|LTR|ERVL-MaLR 19168 NR_146495 102723442 NR_146494 LINC01754 - long intergenic non-protein coding RNA 1754 ncRNA chr1-1336 chr1 53123620 53123864 + 20.3 0.000 intron (NR_109858, intron 2 of 10) intron (NR_109858, intron 2 of 10) 18896 NM_001287597 6512 Hs.104637 NM_006671 ENSG00000162383 SLC1A7 AAAT|EAAT5 solute carrier family 1 member 7 protein-coding chr14-401 chr14 34581105 34581349 + 20.3 0.000 intron (NR_159358, intron 8 of 11) AluSc|SINE|Alu -24838 NR_004421 6060 NR_004421 ENSG00000207389 RNU1-4 HSD2|HSD5|HSD6|HSD7|RNU1|RNU1D2|RNU1E2|RNU1F1|RNU1G1|RNU1G2|U1B2|U1D2|U1E2|U1F RNA, U1 small nuclear 4 snRNA chr1-751 chr1 21603648 21603892 + 20.3 0.000 exon (NM_001350524, exon 21 of 28) exon (NM_001350524, exon 21 of 28) 48128 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr18-175 chr18 23662743 23662987 + 20.3 0.000 promoter-TSS (NM_001308238) promoter-TSS (NM_001308238) 46 NM_001308238 147463 Hs.355689 NM_173505 ENSG00000154065 ANKRD29 - ankyrin repeat domain 29 protein-coding chr17-711 chr17 78979804 78980048 + 20.3 0.000 promoter-TSS (NM_005567) promoter-TSS (NM_005567) -3 NM_005567 3959 Hs.514535 NM_005567 ENSG00000108679 LGALS3BP 90K|BTBD17B|CyCAP|M2BP|MAC-2-BP|TANGO10B|gp90 galectin 3 binding protein protein-coding ML143380.1-3 ML143380.1 318185 318412 + 20.3 0.000 NA NA NA NA chr20-360 chr20 1719216 1719460 + 20.3 0.000 Intergenic LTR8|LTR|ERV1 60408 NR_037142 100289473 Hs.641525 NR_037142 ENSG00000232528 LOC100289473 - cytoskeleton associated protein 2-like pseudogene pseudo chr16-549 chr16 85258517 85258761 + 20.3 0.000 Intergenic Intergenic -24319 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr10-924 chr10 117609103 117609347 + 20.3 0.000 Intergenic L2a|LINE|L2 -64157 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA chr6-435 chr6 157976681 157976925 + 20.3 0.000 Intergenic Intergenic -5060 NM_003898 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr19-1172 chr19 5578486 5578730 + 20.3 0.000 Intergenic (TCTGTC)n|Simple_repeat|Simple_repeat -10574 NR_027064 257000 Hs.515575 NM_153375 ENSG00000223573 TINCR LINC00036|NCRNA00036|PLAC2|onco-lncRNA-16 TINCR ubiquitin domain containing ncRNA chr10-794 chr10 15781823 15782067 + 20.3 0.000 intron (NM_024948, intron 14 of 14) intron (NM_024948, intron 14 of 14) -61610 NM_001291494 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr13-299 chr13 110306770 110307014 + 20.3 0.000 promoter-TSS (NM_001846) promoter-TSS (NM_001846) 265 NM_001845 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr10-73 chr10 133138338 133138582 + 20.3 0.000 Intergenic Intergenic -21759 NM_001347866 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr1-1267 chr1 9338829 9339073 + 20.3 0.000 intron (NM_025106, intron 1 of 2) intron (NM_025106, intron 1 of 2) 46057 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr14-635 chr14 67622699 67622943 + 20.3 0.000 intron (NM_001172, intron 2 of 7) intron (NM_001172, intron 2 of 7) 2901 NM_001172 384 Hs.226007 NM_001172 ENSG00000081181 ARG2 - arginase 2 protein-coding chr10-804 chr10 23280039 23280283 + 20.3 0.000 intron (NM_001365862, intron 8 of 15) intron (NM_001365862, intron 8 of 15) -63796 NR_155752 105376453 NR_155752 LOC105376453 - uncharacterized LOC105376453 ncRNA chr2-1455 chr2 37898590 37898834 + 20.3 0.000 Intergenic Intergenic -22849 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr6-602 chr6 44073064 44073308 + 20.3 0.000 intron (NR_125864, intron 1 of 4) intron (NR_125864, intron 1 of 4) 1466 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr6-432 chr6 152529486 152529730 + 20.3 0.000 intron (NM_182961, intron 4 of 145) MER77|LTR|ERVL 107243 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr6-921 chr6 18126220 18126464 + 20.3 0.000 Intergenic MER51A|LTR|ERV1 -3665 NM_198586 378884 Hs.348351 NM_198586 ENSG00000187566 NHLRC1 EPM2A|EPM2B|MALIN|bA204B7.2 NHL repeat containing E3 ubiquitin protein ligase 1 protein-coding chr1-1454 chr1 234611062 234611306 + 20.3 0.000 Intergenic CpG -1659 NM_182972 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr6-108 chr6 166450402 166450646 + 20.3 0.000 intron (NM_001006932, intron 14 of 21) intron (NM_001006932, intron 14 of 21) 14859 NR_046793 100874353 Hs.675698 NR_046793 ENSG00000232082 RPS6KA2-IT1 - RPS6KA2 intronic transcript 1 ncRNA chr20-415 chr20 26163968 26164212 + 20.3 0.000 Intergenic Intergenic 44188 NR_030386 724033 NR_030386 ENSG00000284419 MIR663A MIR663|MIRN663|hsa-mir-663|hsa-mir-663a|mir-663a microRNA 663a ncRNA chr15-533 chr15 96247755 96247999 + 20.3 0.000 intron (NR_125738, intron 2 of 4) L1PA16|LINE|L1 -78169 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding chr2-588 chr2 11863776 11864020 + 20.3 0.000 Intergenic Intergenic -26912 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA chr4-735 chr4 112297069 112297313 + 20.3 0.000 promoter-TSS (NM_001253884) promoter-TSS (NM_001253884) -152 NM_001253884 80216 Hs.652825 NM_025144 ENSG00000073331 ALPK1 8430410J10Rik|LAK alpha kinase 1 protein-coding chr1-2116 chr1 212088265 212088509 + 20.3 0.000 intron (NM_001286229, intron 11 of 12) L2c|LINE|L2 10774 NR_036068 100422947 NR_036068 ENSG00000264358 MIR3122 mir-3122 microRNA 3122 ncRNA chr11-379 chr11 206538 206782 + 20.3 0.000 promoter-TSS (NM_001286134) promoter-TSS (NM_001286134) 762 NM_016526 51272 Hs.414418 NM_016465 ENSG00000177951 BET1L BET1L1|GOLIM3|GS15|HSPC197 Bet1 golgi vesicular membrane trafficking protein like protein-coding chr1-696 chr1 27525746 27525990 + 20.3 0.000 Intergenic Intergenic -35701 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr7-423 chr7 75915008 75915252 + 20.3 0.000 promoter-TSS (NR_039795) promoter-TSS (NR_039795) -25 NM_001367562 5447 Hs.354056 NM_000941 ENSG00000127948 POR CPR|CYPOR|P450R cytochrome p450 oxidoreductase protein-coding chr17-1351 chr17 57903908 57904152 + 20.3 0.000 promoter-TSS (NM_001292025) promoter-TSS (NM_001292025) -641 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr3-586 chr3 52046412 52046656 + 20.3 0.000 Intergenic Intergenic 10037 NM_001947 1849 Hs.591664 NM_001947 ENSG00000164086 DUSP7 MKPX|PYST2 dual specificity phosphatase 7 protein-coding chr17-780 chr17 44199022 44199266 + 20.1 0.000 promoter-TSS (NM_020218) promoter-TSS (NM_020218) -983 NM_020218 56970 Hs.512651 NM_020218 ENSG00000087152 ATXN7L3 - ataxin 7 like 3 protein-coding chr14-684 chr14 31441520 31441764 + 20.1 0.000 intron (NR_110045, intron 2 of 3) intron (NR_110045, intron 2 of 3) 15864 NM_080664 112487 Hs.116014 NM_080664 ENSG00000129480 DTD2 ATD|C14orf126 D-aminoacyl-tRNA deacylase 2 protein-coding chr7-1387 chr7 116577042 116577286 + 20.1 0.000 intron (NR_120506, intron 2 of 4) intron (NR_120506, intron 2 of 4) 37656 NR_120506 100996266 Hs.552122 NR_120506 LINC01510 - long intergenic non-protein coding RNA 1510 ncRNA chr2-1396 chr2 231554743 231554987 + 20.1 0.000 Intergenic Intergenic -24420 NM_006056 10316 Hs.471619 NM_006056 ENSG00000171596 NMUR1 (FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R neuromedin U receptor 1 protein-coding chr18-133 chr18 9951265 9951509 + 20.1 0.000 intron (NM_194434, intron 5 of 5) intron (NM_194434, intron 5 of 5) 37371 NM_194434 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-980 chr2 113370524 113370768 + 20.1 0.000 Intergenic Intergenic -67045 NM_001330336 150472 Hs.531330 NM_172003 ENSG00000136682 CBWD2 - COBW domain containing 2 protein-coding chr15-221 chr15 47756928 47757172 + 20.1 0.000 intron (NM_153618, intron 1 of 18) intron (NM_153618, intron 1 of 18) 38561 NM_153619 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr16-353 chr16 1812796 1813040 + 20.1 0.000 intron (NM_005326, intron 7 of 8) L1M5|LINE|L1 13907 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr10-1095 chr10 14953385 14953629 + 20.1 0.000 intron (NM_001033858, intron 1 of 15) LTR82A|LTR|ERVL 589 NM_001289078 64421 Hs.655932 NM_022487 ENSG00000152457 DCLRE1C A-SCID|DCLREC1C|RS-SCID|SCIDA|SNM1C DNA cross-link repair 1C protein-coding chr21-64 chr21 37338979 37339223 + 20.1 0.000 Intergenic Intergenic -26472 NM_001396 1859 Hs.368240 NM_001396 ENSG00000157540 DYRK1A DYRK|DYRK1|HP86|MNB|MNBH|MRD7 dual specificity tyrosine phosphorylation regulated kinase 1A protein-coding chr1-806 chr1 3703393 3703637 + 20.1 0.000 intron (NM_001204192, intron 1 of 11) intron (NM_001204192, intron 1 of 11) 5469 NM_001204192 7161 Hs.192132 NM_005427 ENSG00000078900 TP73 P73 tumor protein p73 protein-coding chr7-1133 chr7 100368682 100368926 + 20.1 0.000 TTS (NM_178238) TTS (NM_178238) -4683 NM_178272 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr2-1629 chr2 24050537 24050781 + 20.1 0.000 intron (NM_004116, intron 1 of 3) intron (NM_004116, intron 1 of 3) 918 NM_004116 2281 Hs.709461 NM_004116 ENSG00000119782 FKBP1B FKBP12.6|FKBP1L|OTK4|PKBP1L|PPIase FKBP prolyl isomerase 1B protein-coding chr21-90 chr21 32612396 32612640 + 20.1 0.000 promoter-TSS (NM_001350334) promoter-TSS (NM_001350334) -141 NR_146639 110091775 Hs.5811 NM_001350338 C21orf59-TCP10L - C21orf59-TCP10L readthrough protein-coding chr2-678 chr2 73385557 73385801 + 20.1 0.000 promoter-TSS (NM_015120) promoter-TSS (NM_015120) -79 NM_015120 7840 Hs.184720 NM_015120 ENSG00000116127 ALMS1 ALSS ALMS1 centrosome and basal body associated protein protein-coding chr11-686 chr11 132072156 132072400 + 20.1 0.000 intron (NR_147849, intron 2 of 6) intron (NR_147849, intron 2 of 6) 161460 NR_147854 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr5-550 chr5 150214389 150214633 + 20.1 0.000 Intergenic Intergenic 24449 NM_014228 6534 Hs.241597 NM_014228 ENSG00000011083 SLC6A7 PROT solute carrier family 6 member 7 protein-coding chr1-2630 chr1 208120522 208120766 + 20.1 0.000 intron (NM_025179, intron 4 of 31) MER91A|DNA|hAT-Tip100 123740 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding chr12-824 chr12 47935157 47935401 + 20.1 0.000 Intergenic MamRTE1|LINE|RTE-BovB -28268 NM_024056 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr9-636 chr9 16335944 16336188 + 20.1 0.000 Intergenic Intergenic -59753 NM_001364979 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr11-1427 chr11 15909481 15909725 + 20.1 0.000 Intergenic L2c|LINE|L2 60018 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA chr1-1656 chr1 12556529 12556773 + 20.1 0.000 Intergenic Intergenic 22372 NR_106788 102466722 NR_106788 ENSG00000276830 MIR6730 hsa-mir-6730 microRNA 6730 ncRNA chr9-874 chr9 34654471 34654715 + 20.1 0.000 intron (NR_052010, intron 1 of 12) intron (NR_052010, intron 1 of 12) 696 NR_052010 3590 Hs.591088 NM_004512 ENSG00000137070 IL11RA CRSDA interleukin 11 receptor subunit alpha protein-coding chrX-103 chrX 115968630 115968874 + 20.1 0.000 intron (NR_130730, intron 1 of 2) CpG 359 NR_132337 642776 Hs.634316 NR_130730 ENSG00000235244 DANT2 - DXZ4 associated non-coding transcript 2, distal ncRNA chr22-202 chr22 20436475 20436719 + 20.1 0.000 intron (NM_182895, intron 1 of 10) CpG 1228 NM_182895 91179 Hs.474251 NM_153334 ENSG00000244486 SCARF2 NSR1|SREC-II|SREC2|SRECRP-1|VDEGS scavenger receptor class F member 2 protein-coding chr2-1442 chr2 20365498 20365742 + 20.1 0.000 Intergenic L2a|LINE|L2 -13367 NM_001352925 23369 Hs.467824 NM_015317 ENSG00000055917 PUM2 PUMH2|PUML2 pumilio RNA binding family member 2 protein-coding chr9-392 chr9 99820041 99820285 + 20.1 0.000 promoter-TSS (NR_109802) promoter-TSS (NR_109802) -274 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr1-2275 chr1 20411251 20411495 + 20.1 0.000 intron (NR_033887, intron 1 of 11) MamSINE1|SINE|tRNA-RTE 17421 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA chr12-569 chr12 26319567 26319811 + 20.1 0.000 Intergenic Intergenic 124116 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding chr5-642 chr5 177358042 177358286 + 20.1 0.000 intron (NM_006480, intron 1 of 14) intron (NM_006480, intron 1 of 14) 240 NM_001366618 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr11-1368 chr11 127000560 127000804 + 20.1 0.000 promoter-TSS (NM_032531) promoter-TSS (NM_032531) 88 NM_032531 84623 Hs.376015 NM_032531 ENSG00000149571 KIRREL3 KIRRE|MRD4|NEPH2|PRO4502 kirre like nephrin family adhesion molecule 3 protein-coding chr6-595 chr6 36131992 36132236 + 20.1 0.000 intron (NR_072996, intron 2 of 9) intron (NR_072996, intron 2 of 9) 1601 NM_002754 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr6-984 chr6 43849236 43849480 + 20.1 0.000 intron (NR_149142, intron 2 of 3) intron (NR_149142, intron 2 of 3) 2975 NR_149142 285857 Hs.582798 NR_149142 ENSG00000283215 LINC02537 - long intergenic non-protein coding RNA 2537 ncRNA chr4-611 chr4 118033903 118034147 + 20.1 0.000 promoter-TSS (NR_146514) promoter-TSS (NR_146514) -461 NR_146514 9348 Hs.480596 NM_004784 ENSG00000164100 NDST3 HSST3 N-deacetylase and N-sulfotransferase 3 protein-coding chrX-522 chrX 111869483 111869727 + 20.1 0.000 intron (NM_012471, intron 3 of 10) MamRep434|DNA|TcMar-Tigger -6446 NM_001195576 100329135 Hs.247868 NM_001195576 ENSG00000204025 TRPC5OS TRPC5-AS1 TRPC5 opposite strand protein-coding chr10-819 chr10 36578223 36578467 + 20.1 0.000 Intergenic Intergenic -547512 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr11-1565 chr11 69657795 69658039 + 20.1 0.000 Intergenic Intergenic 16812 NM_053056 595 Hs.523852 NM_053056 ENSG00000110092 CCND1 BCL1|D11S287E|PRAD1|U21B31 cyclin D1 protein-coding chrX-307 chrX 68719829 68720073 + 20.1 0.000 intron (NM_001142504, intron 6 of 13) L2c|LINE|L2 26312 NM_001142504 9754 Hs.95140 NM_014725 ENSG00000130052 STARD8 ARHGAP38|DLC3|STARTGAP3 StAR related lipid transfer domain containing 8 protein-coding chr10-831 chr10 46398513 46398757 + 20.1 0.000 non-coding (NR_033957, exon 1 of 4) non-coding (NR_033957, exon 1 of 4) 273 NR_033957 643650 Hs.744313 NR_033957 ENSG00000285294 LINC00842 - long intergenic non-protein coding RNA 842 ncRNA chr17-552 chr17 49363233 49363477 + 20.1 0.000 promoter-TSS (NM_014897) promoter-TSS (NM_014897) -882 NM_014897 22834 Hs.463375 NM_014897 ENSG00000198740 ZNF652 - zinc finger protein 652 protein-coding chr3-1031 chr3 144436655 144436899 + 20.1 0.000 Intergenic L1PBa|LINE|L1 463696 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr15-266 chr15 79682851 79683095 + 20.1 0.000 Intergenic Intergenic 214024 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr14-335 chr14 79279080 79279324 + 20.1 0.000 promoter-TSS (NR_073546) promoter-TSS (NR_073546) -178 NM_138970 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr16-563 chr16 89577323 89577567 + 20.1 0.000 intron (NM_153636, intron 1 of 14) intron (NM_153636, intron 1 of 14) 1687 NM_153636 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 - copine 7 protein-coding chr17-951 chr17 28614351 28614595 + 20.1 0.000 promoter-TSS (NM_001174103) promoter-TSS (NM_001174103) -288 NM_001174103 124923 Hs.729077 NM_144610 ENSG00000167524 RSKR SGK494 ribosomal protein S6 kinase related protein-coding chr16-1124 chr16 55480556 55480800 + 20.1 0.000 promoter-TSS (NM_001127891) promoter-TSS (NM_001127891) 145 NM_001302509 4313 Hs.513617 NM_004530 ENSG00000087245 MMP2 CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1 matrix metallopeptidase 2 protein-coding chr6-908 chr6 11815426 11815670 + 20.1 0.000 Intergenic Intergenic -36501 NM_001143948 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding chr12-629 chr12 29796934 29797178 + 20.1 0.000 Intergenic Intergenic -12297 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding chr11-886 chr11 47248963 47249207 + 20.1 0.000 promoter-TSS (NM_001357016) promoter-TSS (NM_001357016) 190 NM_001130102 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr17-701 chr17 59964531 59964775 + 20.1 0.000 promoter-TSS (NR_110816) promoter-TSS (NR_110816) 87 NM_016125 51136 Hs.531701 NM_016125 ENSG00000189050 RNFT1 PTD016 ring finger protein, transmembrane 1 protein-coding chr3-1448 chr3 157145635 157145879 + 20.1 0.000 TTS (NM_001308185) TTS (NM_001308185) 15003 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr8-770 chr8 107144097 107144341 + 20.1 0.000 Intergenic Intergenic 192296 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding chr19-1645 chr19 47901725 47901969 + 20.1 0.000 Intergenic Intergenic -5831 NR_024216 100169959 Hs.723093 NR_024216 SNAR-A13 - small NF90 (ILF3) associated RNA A13 snRNA chr5-636 chr5 158582973 158583217 + 20.1 0.000 Intergenic SVA_D|Retroposon|SVA -173322 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr3-904 chr3 194365082 194365326 + 20.1 0.000 intron (NM_001135057, intron 1 of 2) intron (NM_001135057, intron 1 of 2) 4539 NM_001135057 131578 Hs.288467 NM_130830 ENSG00000172061 LRRC15 LIB leucine rich repeat containing 15 protein-coding chr2-520 chr2 204545373 204545617 + 20.1 0.000 promoter-TSS (NM_152526) promoter-TSS (NM_152526) 20 NM_057177 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr12-1055 chr12 13290172 13290416 + 20.1 0.000 Intergenic Intergenic 86451 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr5-880 chr5 57018001 57018245 + 20.1 0.000 Intergenic HERVH-int|LTR|ERV1 -65993 NM_001297598 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr10-981 chr10 28450871 28451115 + 20.1 0.000 intron (NR_134496, intron 1 of 2) Tigger3a|DNA|TcMar-Tigger 44820 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA chr16-533 chr16 66361162 66361406 + 20.1 0.000 Intergenic L2b|LINE|L2 -5407 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding chr5-952 chr5 172755718 172755962 + 20.1 0.000 intron (NR_161233, intron 1 of 3) MSTB|LTR|ERVL-MaLR 337 NR_161233 101928093 Hs.646902 NR_161233 LOC101928093 - uncharacterized LOC101928093 ncRNA chr11-1609 chr11 80103680 80103924 + 20.1 0.000 Intergenic Intergenic 659001 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA chr10-660 chr10 89393178 89393422 + 20.1 0.000 5' UTR (NM_001270930, exon 2 of 3) 5' UTR (NM_001270930, exon 2 of 3) 677 NM_001548 3434 Hs.20315 NM_001548 ENSG00000185745 IFIT1 C56|G10P1|IFI-56|IFI-56K|IFI56|IFIT-1|IFNAI1|ISG56|P56|RNM561 interferon induced protein with tetratricopeptide repeats 1 protein-coding chr5-617 chr5 145854752 145854996 + 20.1 0.000 Intergenic Intergenic 18094 NM_001080516 643226 Hs.570895 NM_001080516 ENSG00000204928 GRXCR2 DFNB101 glutaredoxin and cysteine rich domain containing 2 protein-coding chr4-1100 chr4 168622237 168622481 + 20.1 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) -9219 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr6-923 chr6 20840898 20841142 + 20.1 0.000 intron (NM_017774, intron 8 of 15) AluJo|SINE|Alu 306563 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr11-560 chr11 26994727 26994971 + 20.1 0.000 exon (NM_203371, exon 1 of 1) exon (NM_203371, exon 1 of 1) 737 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding chr5-904 chr5 92017846 92018090 + 20.1 0.000 Intergenic Intergenic -634651 NM_001329672 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding chr17-880 chr17 68580203 68580447 + 20.1 0.000 intron (NM_017565, intron 1 of 10) intron (NM_017565, intron 1 of 10) 21042 NM_017565 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding chr11-940 chr11 102560676 102560920 + 20.1 0.000 Intergenic Intergenic -30051 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding chr4-666 chr4 7034856 7035100 + 20.1 0.000 intron (NR_033828, intron 3 of 3) intron (NR_033828, intron 3 of 3) 8023 NM_153376 257236 Hs.656757 NM_153376 ENSG00000173013 CCDC96 - coiled-coil domain containing 96 protein-coding chr18-247 chr18 55083515 55083759 + 20.1 0.000 Intergenic Intergenic 40669 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr12-762 chr12 93823937 93824181 + 20.1 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -86236 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr14-320 chr14 61178874 61179118 + 20.1 0.000 Intergenic Intergenic 102342 NM_001017970 161291 Hs.146180 NM_001017970 ENSG00000182107 TMEM30B CDC50B transmembrane protein 30B protein-coding chr21-66 chr21 39312474 39312718 + 20.1 0.000 intron (NM_001007246, intron 4 of 4) CpG 1036 NM_033656 54014 Hs.627139 NM_018963 ENSG00000185658 BRWD1 C21orf107|DCAF19|N143|WDR9|WRD9 bromodomain and WD repeat domain containing 1 protein-coding chr2-286 chr2 42047692 42047936 + 20.1 0.000 promoter-TSS (NM_138370) promoter-TSS (NM_138370) -207 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr3-621 chr3 144142442 144142686 + 20.1 0.000 Intergenic Intergenic 169483 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr7-670 chr7 962750 962994 + 20.1 0.000 Intergenic Intergenic -7465 NM_001284308 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr6-669 chr6 35050044 35050288 + 20.1 0.000 intron (NM_015245, intron 11 of 23) intron (NM_015245, intron 11 of 23) 91173 NM_001366327 6954 Hs.435371 NM_018679 ENSG00000124678 TCP11 D6S230E|FPPR t-complex 11 protein-coding chr11-1227 chr11 120710578 120710822 + 20.1 0.000 intron (NM_001282470, intron 2 of 19) intron (NM_001282470, intron 2 of 19) 108415 NR_133008 105369532 Hs.694510 NR_133008 LOC105369532 - uncharacterized LOC105369532 ncRNA chrX-280 chrX 17591314 17591558 + 20.1 0.000 intron (NM_198270, intron 1 of 7) intron (NM_198270, intron 1 of 7) -32309 NR_046632 100873920 Hs.584577 NR_046632 NHS-AS1 - NHS antisense RNA 1 ncRNA chr1-641 chr1 39955933 39956177 + 20.1 0.000 intron (NM_001287808, intron 1 of 11) intron (NM_001287808, intron 1 of 11) 910 NM_001349822 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding chr15-505 chr15 70589328 70589572 + 20.1 0.000 Intergenic LTR85a|LTR|Gypsy? -2844 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA chr3-717 chr3 46694720 46694964 + 20.1 0.000 intron (NM_001370525, intron 2 of 4) intron (NM_001370525, intron 2 of 4) 1064 NM_001370524 259236 Hs.185777 NM_147196 ENSG00000181585 TMIE DFNB6 transmembrane inner ear protein-coding chr6-677 chr6 38349862 38350106 + 20.1 0.000 intron (NM_052893, intron 7 of 11) intron (NM_052893, intron 7 of 11) -131612 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr10-686 chr10 120387377 120387621 + 20.1 0.000 Intergenic MER21C|LTR|ERVL -32276 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr8-737 chr8 37694620 37694864 + 20.1 0.000 Intergenic CpG -1040 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chr1-761 chr1 31798265 31798509 + 20.1 0.000 intron (NM_001281987, intron 8 of 15) intron (NM_001281987, intron 8 of 15) 17664 NM_144569 90853 Hs.62604 NM_144569 ENSG00000134668 SPOCD1 PPP1R146 SPOC domain containing 1 protein-coding chr14-775 chr14 98073697 98073941 + 20.1 0.000 Intergenic Intergenic -95695 NR_152748 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA chr14-378 chr14 96095615 96095859 + 20.1 0.000 Intergenic Intergenic 56375 NM_001252507 56967 Hs.6434 NM_020215 ENSG00000227051 C14orf132 C14orf88 chromosome 14 open reading frame 132 protein-coding chr17-1385 chr17 68205420 68205664 + 20.1 0.000 promoter-TSS (NM_001346481) promoter-TSS (NM_001346481) -587 NM_001346473 51321 Hs.293560 NM_016627 ENSG00000196704 AMZ2 - archaelysin family metallopeptidase 2 protein-coding chr2-1676 chr2 41558605 41558849 + 20.1 0.000 Intergenic L1PBa|LINE|L1 -318828 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr19-1395 chr19 49684244 49684488 + 20.1 0.000 intron (NM_001207042, intron 5 of 7) intron (NM_001207042, intron 5 of 7) 2249 NR_049811 100847074 NR_049811 ENSG00000274306 MIR5088 mir-5088 microRNA 5088 ncRNA chr12-768 chr12 105192915 105193159 + 20.1 0.000 intron (NM_001251904, intron 14 of 20) intron (NM_001251904, intron 14 of 20) 40368 NM_001251905 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr15-535 chr15 96890219 96890463 + 20.1 0.000 Intergenic Intergenic 106906 NR_158220 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr2-979 chr2 112096161 112096405 + 20.1 0.000 intron (NM_001329914, intron 11 of 18) MER92B|LTR|ERV1 41014 NM_032824 84910 Hs.656298 NM_032824 ENSG00000153214 TMEM87B - transmembrane protein 87B protein-coding chr7-1006 chr7 101784918 101785162 + 20.1 0.000 Intergenic Intergenic -30967 NM_001202543 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding chr9-1121 chr9 127598829 127599073 + 20.0 0.000 Intergenic Intergenic -13326 NM_001032221 6812 Hs.288229 NM_003165 ENSG00000136854 STXBP1 MUNC18-1|NSEC1|P67|RBSEC1|UNC18 syntaxin binding protein 1 protein-coding chr11-1601 chr11 76235305 76235549 + 20.0 0.000 Intergenic CpG -28925 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr8-461 chr8 143215697 143215941 + 20.0 0.000 3' UTR (NM_178172, exon 4 of 4) 3' UTR (NM_178172, exon 4 of 4) 2601 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr9-479 chr9 89606230 89606474 + 20.0 0.000 3' UTR (NM_006705, exon 4 of 4) 3' UTR (NM_006705, exon 4 of 4) 1340 NM_006705 10912 Hs.9701 NM_006705 ENSG00000130222 GADD45G CR6|DDIT2|GADD45gamma|GRP17 growth arrest and DNA damage inducible gamma protein-coding chr12-805 chr12 10723091 10723335 + 20.0 0.000 5' UTR (NM_003651, exon 1 of 10) 5' UTR (NM_003651, exon 1 of 10) 110 NM_003651 8531 Hs.221889 NM_003651 ENSG00000060138 YBX3 CSDA|CSDA1|DBPA|ZONAB Y-box binding protein 3 protein-coding chr1-2313 chr1 28129194 28129438 + 20.0 0.000 Intergenic Intergenic -40679 NM_001282562 2140 Hs.185774 NM_001990 ENSG00000158161 EYA3 - EYA transcriptional coactivator and phosphatase 3 protein-coding chr8-769 chr8 106765324 106765568 + 20.0 0.000 intron (NM_139166, intron 1 of 1) intron (NM_139166, intron 1 of 1) 4798 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding chrX-195 chrX 25060155 25060399 + 20.0 0.000 Intergenic Intergenic -44312 NM_139058 170302 Hs.300304 NM_139058 ENSG00000004848 ARX CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS aristaless related homeobox protein-coding chr13-119 chr13 91347771 91348015 + 20.0 0.000 promoter-TSS (NR_027349) promoter-TSS (NR_027349) 73 NR_027350 407975 Hs.24115 NR_027349 ENSG00000215417 MIR17HG C13orf25|FGLDS2|LINC00048|MIHG1|MIRH1|MIRHG1|NCRNA00048|miR-17-92 miR-17-92a-1 cluster host gene ncRNA chr11-1088 chr11 44927299 44927543 + 20.0 0.000 intron (NM_130783, intron 9 of 9) intron (NM_130783, intron 9 of 9) 22739 NM_001258320 9537 Hs.554791 NM_006034 ENSG00000175274 TP53I11 PIG11 tumor protein p53 inducible protein 11 protein-coding chr3-880 chr3 139198948 139199192 + 20.0 0.000 Intergenic Intergenic 34452 NR_027070 140464 Hs.721270 NR_027070 PISRT1 NCRNA00195 PISRT1 lncRNA ncRNA chr3-736 chr3 55704542 55704786 + 20.0 0.000 intron (NR_132749, intron 14 of 17) intron (NR_132749, intron 14 of 17) -45195 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA chr19-921 chr19 3958989 3959233 + 20.0 0.000 exon (NM_001348, exon 9 of 9) exon (NM_001348, exon 9 of 9) 2401 NR_030367 693222 NR_030367 ENSG00000283928 MIR637 MIRN637|hsa-mir-637 microRNA 637 ncRNA chr7-1328 chr7 80640828 80641072 + 20.0 0.000 intron (NM_001371079, intron 1 of 13) intron (NM_001371079, intron 1 of 13) 2308 NM_001371079 chr11-598 chr11 6419102 6419346 + 20.0 0.000 promoter-TSS (NM_001164) promoter-TSS (NM_001164) -113 NR_047512 322 Hs.372840 NM_001164 ENSG00000166313 APBB1 FE65|MGC:9072|RIR amyloid beta precursor protein binding family B member 1 protein-coding chr5-485 chr5 133051773 133052017 + 20.0 0.000 promoter-TSS (NM_002154) promoter-TSS (NM_002154) -118 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding chr17-916 chr17 2151449 2151693 + 20.0 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -62810 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr2-327 chr2 217858713 217858957 + 20.0 0.000 intron (NM_001308023, intron 15 of 29) intron (NM_001308023, intron 15 of 29) -25102 NR_145792 109623482 NR_145792 SNORA115 - small nucleolar RNA, H/ACA box 115 snoRNA chr7-1080 chr7 5851566 5851810 + 20.0 0.000 intron (NR_023382, intron 6 of 6) intron (NR_023382, intron 6 of 6) 28528 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr2-1420 chr2 240965887 240966131 + 20.0 0.000 intron (NM_001351305, intron 24 of 31) intron (NM_001351305, intron 24 of 31) 1442 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA chr10-737 chr10 73246924 73247168 + 20.0 0.000 promoter-TSS (NR_038373) promoter-TSS (NR_038373) 209 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding chr14-762 chr14 87002715 87002959 + 20.0 0.000 Intergenic Intergenic 97059 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA chr3-960 chr3 49675917 49676161 + 20.0 0.000 intron (NM_001640, intron 5 of 21) intron (NM_001640, intron 5 of 21) 1688 NM_001640 327 Hs.517969 NM_001640 ENSG00000164062 APEH AARE|ACPH|APH|D3F15S2|D3S48E|DNF15S2|OPH acylaminoacyl-peptide hydrolase protein-coding chr20-603 chr20 44154474 44154718 + 20.0 0.000 intron (NM_020433, intron 2 of 5) intron (NM_020433, intron 2 of 5) 32592 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr9-1263 chr9 95822842 95823086 + 20.0 0.000 intron (NR_023390, intron 2 of 2) intron (NR_023390, intron 2 of 2) -52727 NM_020207 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr7-1243 chr7 28299084 28299328 + 20.0 0.000 promoter-TSS (NM_182899) promoter-TSS (NM_182899) -115 NM_182899 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr6-866 chr6 151036366 151036610 + 20.0 0.000 intron (NM_001350486, intron 25 of 27) intron (NM_001350486, intron 25 of 27) 29480 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr1-1882 chr1 181557053 181557297 + 20.0 0.000 intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 73658 NM_001205293 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding chr12-745 chr12 51026170 51026414 + 20.0 0.000 promoter-TSS (NM_001174129) promoter-TSS (NM_001174129) 92 NR_033421 4891 Hs.505545 NM_000617 ENSG00000110911 SLC11A2 AHMIO1|DCT1|DMT1|NRAMP2 solute carrier family 11 member 2 protein-coding chr8-511 chr8 93361289 93361533 + 20.0 0.000 intron (NR_033858, intron 10 of 10) intron (NR_033858, intron 10 of 10) -194561 NR_161372 389676 Hs.386711 NR_161372 C8orf87 - chromosome 8 open reading frame 87 ncRNA chr2-986 chr2 133674817 133675061 + 20.0 0.000 Intergenic Intergenic -106476 NM_207363 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding chr22-385 chr22 29780627 29780871 + 20.0 0.000 Intergenic Intergenic 13380 NM_013387 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr1-978 chr1 1345083 1345327 + 20.0 0.000 intron (NM_004421, intron 1 of 14) intron (NM_004421, intron 1 of 14) 4213 NM_004421 1855 Hs.731450 NM_004421 ENSG00000107404 DVL1 DRS2|DVL|DVL1L1|DVL1P1 dishevelled segment polarity protein 1 protein-coding chr3-1013 chr3 127598293 127598537 + 20.0 0.000 promoter-TSS (NM_001353003) promoter-TSS (NM_001353003) 4 NM_004526 4171 Hs.477481 NM_004526 ENSG00000073111 MCM2 BM28|CCNL1|CDCL1|D3S3194|DFNA70|MITOTIN|cdc19 minichromosome maintenance complex component 2 protein-coding chr17-1131 chr17 39951142 39951386 + 20.0 0.000 Intergenic Intergenic 9790 NM_001195545 100505591 Hs.145136 NM_001195545 ENSG00000204913 LRRC3C - leucine rich repeat containing 3C protein-coding chr5-607 chr5 135493623 135493867 + 20.0 0.000 Intergenic Intergenic -41394 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding chr14-714 chr14 58738219 58738463 + 20.0 0.000 Intergenic Tigger3b|DNA|TcMar-Tigger -89947 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA chr10-526 chr10 89515571 89515815 + 20.0 0.000 intron (NM_213606, intron 2 of 7) intron (NM_213606, intron 2 of 7) 19901 NM_213606 387700 Hs.530338 NM_213606 ENSG00000152779 SLC16A12 CJMG|CRT2|CTRCT47|MCT12 solute carrier family 16 member 12 protein-coding chr16-1210 chr16 85809931 85810175 + 20.0 0.000 Intergenic HAL1|LINE|L1 10358 NM_001318786 1327 Hs.433419 NM_001861 ENSG00000131143 COX4I1 COX IV-1|COX4|COX4-1|COXIV|COXIV-1 cytochrome c oxidase subunit 4I1 protein-coding chr17-831 chr17 82156429 82156673 + 20.0 0.000 3' UTR (NM_001316321, exon 15 of 15) 3' UTR (NM_001316321, exon 15 of 15) 56291 NM_001367828 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr3-1149 chr3 123816745 123816989 + 20.0 0.000 intron (NM_001321309, intron 3 of 32) intron (NM_001321309, intron 3 of 32) 67465 NM_053028 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr5-449 chr5 16575173 16575417 + 20.0 0.000 intron (NM_001034850, intron 1 of 8) MER112|DNA|hAT-Charlie -40631 NR_109946 101929524 Hs.734029 NR_109946 ENSG00000246214 LOC101929524 - uncharacterized LOC101929524 ncRNA chr2-1198 chr2 14492924 14493168 + 20.0 0.000 Intergenic Intergenic -92088 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA chr16-427 chr16 30896910 30897154 + 20.0 0.000 intron (NM_001142544, intron 1 of 2) intron (NM_001142544, intron 1 of 2) 418 NM_001142544 1489 Hs.483811 NM_001330 ENSG00000150281 CTF1 CT-1|CT1 cardiotrophin 1 protein-coding chr22-483 chr22 35971686 35971930 + 20.0 0.000 intron (NM_001082578, intron 1 of 13) intron (NM_001082578, intron 1 of 13) -10178 NM_001349995 23543 Hs.282998 NM_014309 ENSG00000100320 RBFOX2 FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh RNA binding fox-1 homolog 2 protein-coding chr17-577 chr17 82593504 82593748 + 20.0 0.000 intron (NM_004514, intron 8 of 8) intron (NM_004514, intron 8 of 8) 54818 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr16-1095 chr16 30491986 30492230 + 20.0 0.000 intron (NM_002209, intron 11 of 30) intron (NM_002209, intron 11 of 30) -11811 NR_039743 100616405 NR_039743 ENSG00000266305 MIR4518 mir-4518 microRNA 4518 ncRNA chr9-1184 chr9 21420169 21420413 + 20.0 0.000 Intergenic Intergenic 11174 NM_002170 3445 Hs.73890 NM_002170 ENSG00000120242 IFNA8 IFN-alphaB interferon alpha 8 protein-coding chr10-664 chr10 94546440 94546684 + 20.0 0.000 intron (NM_001289075, intron 2 of 20) intron (NM_001289075, intron 2 of 20) 774 NM_001289069 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding chr4-594 chr4 42412656 42412900 + 20.0 0.000 3' UTR (NM_006095, exon 37 of 37) 3' UTR (NM_006095, exon 37 of 37) 15290 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr3-458 chr3 172040647 172040891 + 20.0 0.000 intron (NM_001135095, intron 1 of 25) CpG 238 NM_001135095 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr16-994 chr16 89529395 89529639 + 20.0 0.000 exon (NM_003119, exon 6 of 17) exon (NM_003119, exon 6 of 17) 21114 NM_199367 6687 Hs.185597 NM_003119 ENSG00000197912 SPG7 CAR|CMAR|PGN|SPG5C SPG7 matrix AAA peptidase subunit, paraplegin protein-coding chr10-937 chr10 124290983 124291227 + 20.0 0.000 Intergenic Intergenic 127818 NM_001322965 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr22-611 chr22 19032758 19033002 + 20.0 0.000 Intergenic Intergenic 10256 NR_026651 26222 Hs.681383 NR_026651 DGCR10 DGS-B DiGeorge syndrome critical region gene 10 ncRNA chr7-682 chr7 1733151 1733395 + 20.0 0.000 intron (NM_001128636, intron 2 of 2) intron (NM_001128636, intron 2 of 2) 9037 NR_120508 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA chr17-619 chr17 41910656 41910900 + 20.0 0.000 intron (NM_198830, intron 3 of 27) intron (NM_198830, intron 3 of 27) 8173 NM_001096 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr8-886 chr8 66679768 66680012 + 20.0 0.000 non-coding (NR_161216, exon 3 of 3) non-coding (NR_161216, exon 3 of 3) 12294 NR_161217 56260 Hs.661238 NM_019607 ENSG00000213865 C8orf44 - chromosome 8 open reading frame 44 ncRNA chr12-340 chr12 101877485 101877729 + 20.0 0.000 promoter-TSS (NM_018370) promoter-TSS (NM_018370) 27 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr5-1090 chr5 120778873 120779117 + 20.0 0.000 Intergenic Intergenic 247531 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr19-1476 chr19 5127270 5127514 + 20.0 0.000 intron (NM_015015, intron 11 of 22) intron (NM_015015, intron 11 of 22) 158279 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr5-1182 chr5 175420564 175420808 + 20.0 0.000 Intergenic Intergenic 23496 NM_000794 1812 Hs.2624 NM_000794 ENSG00000184845 DRD1 DADR|DRD1A dopamine receptor D1 protein-coding chr15-540 chr15 100918917 100919161 + 20.0 0.000 promoter-TSS (NM_024652) promoter-TSS (NM_024652) 244 NR_135828 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr1-1506 chr1 38728416 38728660 + 20.0 0.000 Intergenic Intergenic 131234 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding chr1-1083 chr1 165768860 165769104 + 20.0 0.000 promoter-TSS (NR_125374) promoter-TSS (NR_125374) 53 NR_125374 100147773 Hs.633824 NR_125374 TMCO1-AS1 - TMCO1 antisense RNA 1 ncRNA chr13-240 chr13 44174786 44175030 + 20.0 0.000 Intergenic L1M1|LINE|L1 -13651 NM_024058 79024 Hs.730073 NM_024058 ENSG00000139656 SMIM2 C13orf44 small integral membrane protein 2 protein-coding chr12-341 chr12 104456881 104457125 + 20.0 0.000 promoter-TSS (NM_001173982) promoter-TSS (NM_001173982) 55 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr9-603 chr9 98380142 98380386 + 20.0 0.000 intron (NM_005458, intron 11 of 18) intron (NM_005458, intron 11 of 18) -124615 NM_018421 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chr10-1187 chr10 72175188 72175432 + 20.0 0.000 intron (NM_001369110, intron 5 of 8) MIRb|SINE|MIR 40646 NM_001369091 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr8-699 chr8 141643649 141643893 + 20.0 0.000 Intergenic L1MC5|LINE|L1 -136541 NR_102364 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr9-1336 chr9 127816952 127817196 + 20.0 0.000 non-coding (NR_136302, exon 1 of 6) non-coding (NR_136302, exon 1 of 6) 1008 NR_136302 102723566 NR_136302 ENSG00000225032 LOC102723566 - uncharacterized LOC102723566 ncRNA chr5-1057 chr5 74762745 74762989 + 20.0 0.000 intron (NR_104006, intron 2 of 19) MER44C|DNA|TcMar-Tigger 4250 NM_001281302 84340 Hs.277154 NM_032380 ENSG00000164347 GFM2 EF-G2mt|EFG2|MRRF2|MST027|MSTP027|RRF|RRF2|RRF2mt|hEFG2|mEF-G 2 G elongation factor mitochondrial 2 protein-coding chr19-375 chr19 44747442 44747686 + 20.0 0.000 Intergenic G-rich|Low_complexity|Low_complexity -1144 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr11-1155 chr11 68346809 68347053 + 20.0 0.000 intron (NM_002335, intron 1 of 22) intron (NM_002335, intron 1 of 22) 34340 NM_002335 4041 Hs.6347 NM_002335 ENSG00000162337 LRP5 BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP-7|LRP7|OPPG|OPS|OPTA1|PCLD4|VBCH2 LDL receptor related protein 5 protein-coding chr21-176 chr21 42264896 42265140 + 20.0 0.000 intron (NM_207627, intron 3 of 15) intron (NM_207627, intron 3 of 15) 45120 NM_207174 9619 Hs.124649 NM_004915 ENSG00000160179 ABCG1 ABC8|WHITE1 ATP binding cassette subfamily G member 1 protein-coding chr15-684 chr15 71096611 71096855 + 20.0 0.000 Intergenic Intergenic -44716 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr3-460 chr3 184292517 184292761 + 20.0 0.000 3' UTR (NM_001100120, exon 19 of 19) 3' UTR (NM_001100120, exon 19 of 19) -6602 NM_002808 5708 Hs.518464 NM_002808 ENSG00000175166 PSMD2 P97|RPN1|S2|TRAP2 proteasome 26S subunit, non-ATPase 2 protein-coding chr12-835 chr12 51531836 51532080 + 20.0 0.000 Intergenic Intergenic -59275 NM_001330260 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr2-1895 chr2 196479373 196479617 + 20.0 0.000 intron (NM_001348768, intron 1 of 28) MER20B|DNA|hAT-Charlie 113488 NM_020760 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr8-817 chr8 22274143 22274387 + 20.0 0.000 intron (NR_134293, intron 1 of 1) LTR82B|LTR|ERVL 897 NR_134293 100507071 Hs.458623 NR_134293 ENSG00000254064 LOC100507071 - uncharacterized LOC100507071 ncRNA chr12-1205 chr12 106080323 106080567 + 20.0 0.000 intron (NM_014840, intron 4 of 6) intron (NM_014840, intron 4 of 6) 59588 NM_014840 9891 Hs.524692 NM_014840 ENSG00000074590 NUAK1 ARK5 NUAK family kinase 1 protein-coding chr1-2611 chr1 202647105 202647349 + 20.0 0.000 intron (NM_177402, intron 1 of 8) MamRep1879|DNA|hAT-Tip100? -3774 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr6-613 chr6 96980126 96980370 + 20.0 0.000 intron (NM_001286251, intron 3 of 8) L1PA15|LINE|L1 -29828 NM_001286254 114792 Hs.45056 NM_052904 ENSG00000186231 KLHL32 BKLHD5|KIAA1900|UG0030H05|dJ21F7.1 kelch like family member 32 protein-coding chr1-989 chr1 6701706 6701950 + 20.0 0.000 promoter-TSS (NM_018198) promoter-TSS (NM_018198) -12 NM_018198 55735 Hs.462640 NM_018198 ENSG00000007923 DNAJC11 dJ126A5.1 DnaJ heat shock protein family (Hsp40) member C11 protein-coding chr15-630 chr15 41855186 41855430 + 20.0 0.000 exon (NM_016642, exon 55 of 68) exon (NM_016642, exon 55 of 68) 11243 NR_036195 100423013 NR_036195 ENSG00000264850 MIR4310 - microRNA 4310 ncRNA chr11-1051 chr11 2309472 2309716 + 20.0 0.000 intron (NM_139022, intron 4 of 9) intron (NM_139022, intron 4 of 9) -6454 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr1-1993 chr1 14248703 14248947 + 20.0 0.000 Intergenic MLT1G|LTR|ERVL-MaLR 171148 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA chr4-978 chr4 54400919 54401163 + 20.0 0.000 Intergenic Intergenic 68149 NR_147160 105377656 Hs.157697 NR_147160 LINC02283 - long intergenic non-protein coding RNA 2283 ncRNA chr8-574 chr8 102536978 102537222 + 20.0 0.000 Intergenic Intergenic -14489 NM_024410 4956 Hs.159274 NM_024410 ENSG00000155087 ODF1 CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF outer dense fiber of sperm tails 1 protein-coding chr8-383 chr8 27965011 27965255 + 20.0 0.000 intron (NM_173833, intron 3 of 8) intron (NM_173833, intron 3 of 8) 27540 NM_173833 286133 Hs.591833 NM_173833 ENSG00000168079 SCARA5 NET33|Tesr scavenger receptor class A member 5 protein-coding chr18-179 chr18 32383045 32383289 + 20.0 0.000 intron (NM_001242409, intron 2 of 5) intron (NM_001242409, intron 2 of 5) 87715 NM_022751 64762 Hs.444314 NM_022751 ENSG00000141441 GAREM1 C18orf11|FAM59A|GAREM|Gm944 GRB2 associated regulator of MAPK1 subtype 1 protein-coding chr12-399 chr12 14948797 14949041 + 20.0 0.000 promoter-TSS (NR_135637) promoter-TSS (NR_135637) -23 NR_135637 397 Hs.504877 NM_001175 ENSG00000111348 ARHGDIB D4|GDIA2|GDID4|LYGDI|Ly-GDI|RAP1GN1|RhoGDI2 Rho GDP dissociation inhibitor beta protein-coding chr13-172 chr13 37000907 37001151 + 20.0 0.000 intron (NM_181503, intron 1 of 10) CpG 243 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr8-533 chr8 140944288 140944532 + 20.0 0.000 intron (NM_001352699, intron 1 of 35) intron (NM_001352699, intron 1 of 35) 56594 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr7-478 chr7 100218021 100218265 + 20.0 0.000 intron (NR_028038, intron 5 of 6) LTR13|LTR|ERVK -1105 NM_024070 79037 Hs.729356 NM_024070 ENSG00000213413 PVRIG C7orf15|CD112R PVR related immunoglobulin domain containing protein-coding chr17-1457 chr17 81499123 81499367 + 20.0 0.000 Intergenic CpG 13554 NM_001199954 71 Hs.514581 NM_001614 ENSG00000184009 ACTG1 ACT|ACTG|DFNA20|DFNA26|HEL-176 actin gamma 1 protein-coding chr21-269 chr21 46065938 46066182 + 20.0 0.000 Intergenic Intergenic -32052 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr19-1044 chr19 1987517 1987761 + 20.0 0.000 exon (NM_017797, exon 6 of 9) exon (NM_017797, exon 6 of 9) 28075 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr11-267 chr11 3147043 3147287 + 20.0 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 18145 NM_001144063 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr15-383 chr15 64620621 64620865 + 20.0 0.000 intron (NM_015042, intron 1 of 8) intron (NM_015042, intron 1 of 8) 82538 NM_002537 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding chr19-1233 chr19 35850582 35850826 + 20.0 0.000 intron (NM_004646, intron 4 of 28) intron (NM_004646, intron 4 of 28) 1289 NM_004646 4868 Hs.122186 NM_004646 ENSG00000161270 NPHS1 CNF|NPHN|nephrin NPHS1 adhesion molecule, nephrin protein-coding chr3-253 chr3 101849327 101849571 + 20.0 0.000 promoter-TSS (NM_031419) promoter-TSS (NM_031419) -65 NM_031419 64332 Hs.319171 NM_031419 ENSG00000144802 NFKBIZ IKBZ|INAP|MAIL NFKB inhibitor zeta protein-coding chr15-464 chr15 40985696 40985940 + 20.0 0.000 intron (NM_017553, intron 31 of 35) AluJb|SINE|Alu 32347 NM_024111 79094 Hs.155569 NM_024111 ENSG00000128965 CHAC1 - ChaC glutathione specific gamma-glutamylcyclotransferase 1 protein-coding chr7-965 chr7 69728302 69728546 + 20.0 0.000 intron (NM_015570, intron 1 of 18) intron (NM_015570, intron 1 of 18) 129949 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr10-518 chr10 79192740 79192984 + 20.0 0.000 intron (NM_020338, intron 4 of 24) intron (NM_020338, intron 4 of 24) 123896 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr19-1277 chr19 47501677 47501921 + 20.0 0.000 TTS (NR_038452) TTS (NR_038452) 13264 NR_038456 8775 Hs.126938 NM_003827 ENSG00000105402 NAPA SNAPA NSF attachment protein alpha protein-coding chr15-296 chr15 70892430 70892674 + 20.0 0.000 promoter-TSS (NM_020147) promoter-TSS (NM_020147) 109 NM_001199018 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding chr20-584 chr20 35087783 35088027 + 20.0 0.000 intron (NM_199368, intron 1 of 18) L2|LINE|L2 4902 NM_015638 26133 Hs.168073 NM_015638 ENSG00000100991 TRPC4AP C20orf188|PPP1R158|TRRP4AP|TRUSS transient receptor potential cation channel subfamily C member 4 associated protein protein-coding chr9-1030 chr9 136616534 136616778 + 20.0 0.000 non-coding (NR_135288, exon 1 of 3) non-coding (NR_135288, exon 1 of 3) 525 NR_135288 401561 Hs.609301 NR_135288 ENSG00000279141 LINC01451 HCCAT4 long intergenic non-protein coding RNA 1451 ncRNA chr9-1168 chr9 5832862 5833106 + 20.0 0.000 exon (NM_024896, exon 1 of 15) exon (NM_024896, exon 1 of 15) 133 NM_024896 79956 Hs.591078 NM_024896 ENSG00000099219 ERMP1 FXNA|KIAA1815|bA207C16.3 endoplasmic reticulum metallopeptidase 1 protein-coding chr12-1240 chr12 119728278 119728522 + 20.0 0.000 intron (NM_007174, intron 27 of 46) L1MC1|LINE|L1 -14676 NR_031589 100302274 NR_031589 ENSG00000283768 MIR1178 MIRN1178|hsa-mir-1178 microRNA 1178 ncRNA chr11-1174 chr11 74123004 74123248 + 20.0 0.000 exon (NM_015531, exon 8 of 31) exon (NM_015531, exon 8 of 31) 47876 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding chr9-549 chr9 131837688 131837932 + 20.0 0.000 Intergenic Intergenic -97866 NM_001304275 2889 Hs.127897 NM_005312 ENSG00000107263 RAPGEF1 C3G|GRF2 Rap guanine nucleotide exchange factor 1 protein-coding chr20-126 chr20 59940583 59940827 + 20.0 0.000 promoter-TSS (NM_006242) promoter-TSS (NM_006242) 316 NM_022106 63939 Hs.54973 NM_022106 ENSG00000196227 FAM217B C20orf177|dJ551D2.5 family with sequence similarity 217 member B protein-coding chr2-1068 chr2 20223364 20223608 + 20.0 0.000 intron (NM_001006946, intron 2 of 5) CpG 1644 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr7-340 chr7 2477505 2477749 + 20.0 0.000 Intergenic Intergenic -1244 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr22-291 chr22 43143201 43143445 + 20.0 0.000 promoter-TSS (NM_173467) promoter-TSS (NM_173467) 74 NR_046423 27349 Hs.349111 NM_014507 ENSG00000100294 MCAT FASN2C|MCT|MCT1|MT|NET62|fabD malonyl-CoA-acyl carrier protein transacylase protein-coding chr1-1954 chr1 240107069 240107313 + 19.8 0.000 intron (NM_020066, intron 1 of 17) L3|LINE|CR1 15308 NM_001305424 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding chr16-1134 chr16 58129382 58129626 + 19.8 0.000 promoter-TSS (NR_136632) promoter-TSS (NR_136632) -79 NR_136632 29105 Hs.532755 NM_013242 ENSG00000070761 CFAP20 BUG22|C16orf80|EVORF|GTL3|fSAP23 cilia and flagella associated protein 20 protein-coding chr8-925 chr8 99218019 99218263 + 19.8 0.000 intron (NM_017890, intron 17 of 61) HERVL40-int|LTR|ERVL 204875 NM_181661 157680 Hs.191540 NM_015243 ENSG00000132549 VPS13B CHS1|COH1 vacuolar protein sorting 13 homolog B protein-coding chr4-1053 chr4 119113315 119113559 + 19.8 0.000 Intergenic Intergenic -22347 NM_016599 51778 Hs.732122 NM_016599 ENSG00000172399 MYOZ2 C4orf5|CMH16|CS-1|FATZ-2 myozenin 2 protein-coding chr10-1072 chr10 617850 618094 + 19.8 0.000 intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -10592 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr11-1526 chr11 64742630 64742874 + 19.8 0.000 intron (NM_001098671, intron 2 of 16) CpG-4419 1390 NM_001098671 10235 Hs.99491 NM_005825 ENSG00000068831 RASGRP2 CALDAG-GEFI|CDC25L RAS guanyl releasing protein 2 protein-coding chr3-789 chr3 155282503 155282747 + 19.8 0.000 Intergenic L1PB|LINE|L1 11058 NM_001352129 100507537 Hs.518341 NM_001352129 ENSG00000240045 STRIT1 DWORF small transmembrane regulator of ion transport 1 protein-coding chr13-538 chr13 113421791 113422035 + 19.8 0.000 TTS (NM_138430) TTS (NM_138430) -7520 NM_001304433 101928841 Hs.646609 NM_001003399 LOC101928841 - collagen alpha-1(II) chain-like protein-coding chr20-552 chr20 22723772 22724016 + 19.8 0.000 Intergenic Intergenic -38550 NR_146527 105372566 Hs.555065 NR_146527 LINC01747 - long intergenic non-protein coding RNA 1747 ncRNA chr20-439 chr20 47464345 47464589 + 19.8 0.000 Intergenic Intergenic -37420 NM_001174087 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr11-876 chr11 43818315 43818559 + 19.8 0.000 intron (NM_016142, intron 6 of 10) intron (NM_016142, intron 6 of 10) -62394 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding chr3-1020 chr3 132593681 132593925 + 19.8 0.000 intron (NM_032169, intron 13 of 19) intron (NM_032169, intron 13 of 19) -3467 NM_016557 51554 Hs.310512 NM_016557 ENSG00000129048 ACKR4 CC-CKR-11|CCBP2|CCR-11|CCR10|CCR11|CCRL1|CCX CKR|CCX-CKR|CKR-11|PPR1|VSHK1 atypical chemokine receptor 4 protein-coding chrX-39 chrX 30653104 30653348 + 19.8 0.000 promoter-TSS (NM_203391) promoter-TSS (NM_203391) -133 NM_001205019 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr9-976 chr9 128255347 128255591 + 19.8 0.000 TTS (NM_001288737) TTS (NM_001288737) -10439 NR_036110 100422893 NR_036110 ENSG00000264823 MIR3154 mir-3154 microRNA 3154 ncRNA KI270736.1-13 KI270736.1 166604 166848 + 19.8 0.000 NA NA NA NA chr2-1483 chr2 74413780 74414024 + 19.8 0.000 TTS (NM_001145054) TTS (NM_001145054) 3815 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding chr7-1381 chr7 110944021 110944265 + 19.8 0.000 intron (NM_032549, intron 4 of 5) intron (NM_032549, intron 4 of 5) -146863 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding chr16-483 chr16 31471806 31472050 + 19.8 0.000 promoter-TSS (NM_001164719) promoter-TSS (NM_001164719) -224 NM_001042454 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chr9-353 chr9 33523974 33524218 + 19.8 0.000 promoter-TSS (NM_001353432) promoter-TSS (NM_001353432) -155 NM_001353432 441459 Hs.493710 NM_001013728 ENSG00000230453 ANKRD18B bA255A11.3|bA255A11.5 ankyrin repeat domain 18B protein-coding chr10-703 chr10 132396391 132396635 + 19.8 0.000 promoter-TSS (NM_138499) promoter-TSS (NM_138499) -687 NM_138499 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr3-515 chr3 29065478 29065722 + 19.8 0.000 Intergenic Intergenic 215339 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr12-1084 chr12 44253514 44253758 + 19.8 0.000 intron (NM_001286213, intron 4 of 6) MIR|SINE|MIR 417555 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding chr14-619 chr14 49294699 49294943 + 19.8 0.000 Intergenic Intergenic 291559 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr10-1080 chr10 3142201 3142445 + 19.8 0.000 intron (NR_038284, intron 1 of 3) intron (NR_038284, intron 1 of 3) 722 NR_038284 100507034 Hs.665365 NR_038284 ENSG00000237399 PITRM1-AS1 - PITRM1 antisense RNA 1 ncRNA chrX-335 chrX 133390052 133390296 + 19.8 0.000 intron (NM_001448, intron 1 of 8) intron (NM_001448, intron 1 of 8) 25315 NM_001448 2239 Hs.58367 NM_001448 ENSG00000076716 GPC4 K-glypican glypican 4 protein-coding chr17-272 chr17 81868608 81868852 + 19.8 0.000 exon (NM_001301242, exon 7 of 7) exon (NM_001301242, exon 7 of 7) 2267 NM_001301241 396 Hs.159161 NM_004309 ENSG00000141522 ARHGDIA GDIA1|HEL-S-47e|NPHS8|RHOGDI|RHOGDI-1 Rho GDP dissociation inhibitor alpha protein-coding chr11-857 chr11 9566075 9566319 + 19.8 0.000 Intergenic Intergenic -7473 NM_003390 7465 Hs.249441 NM_003390 ENSG00000166483 WEE1 WEE1A|WEE1hu WEE1 G2 checkpoint kinase protein-coding chr2-1838 chr2 145166892 145167136 + 19.8 0.000 Intergenic Intergenic 499047 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr3-1212 chr3 10173955 10174199 + 19.8 0.000 intron (NM_001570, intron 1 of 12) intron (NM_001570, intron 1 of 12) 9158 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr10-865 chr10 79248580 79248824 + 19.8 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -98767 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr17-462 chr17 81413755 81413999 + 19.8 0.000 intron (NM_001291324, intron 1 of 27) intron (NM_001291324, intron 1 of 27) -13099 NR_039894 100616294 NR_039894 ENSG00000266392 MIR4740 - microRNA 4740 ncRNA chr12-694 chr12 113889302 113889546 + 19.8 0.000 intron (NM_001146698, intron 21 of 24) intron (NM_001146698, intron 21 of 24) 76901 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding chr1-2245 chr1 15714531 15714775 + 19.8 0.000 intron (NM_015164, intron 1 of 19) intron (NM_015164, intron 1 of 19) -21605 NM_207348 284723 Hs.631867 NM_207348 ENSG00000162461 SLC25A34 - solute carrier family 25 member 34 protein-coding chr16-577 chr16 29900460 29900704 + 19.8 0.000 promoter-TSS (NM_181718) promoter-TSS (NM_181718) 94 NM_181718 253982 Hs.655761 NM_181718 ENSG00000174939 ASPHD1 - aspartate beta-hydroxylase domain containing 1 protein-coding chr2-865 chr2 168190106 168190350 + 19.8 0.000 intron (NM_013233, intron 1 of 17) intron (NM_013233, intron 1 of 17) 57367 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding chr19-1003 chr19 47067267 47067511 + 19.8 0.000 exon (NM_015168, exon 15 of 15) exon (NM_015168, exon 15 of 15) -18765 NM_017854 54958 Hs.105606 NM_017854 ENSG00000130748 TMEM160 - transmembrane protein 160 protein-coding chr13-171 chr13 33643318 33643562 + 19.8 0.000 intron (NM_001243476, intron 3 of 17) MLT1M|LTR|ERVL-MaLR 33354 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr19-988 chr19 41957864 41958108 + 19.8 0.000 intron (NM_006423, intron 3 of 4) GA-rich|Low_complexity|Low_complexity 1335 NM_006423 10567 Hs.11417 NM_006423 ENSG00000105404 RABAC1 PRA1|PRAF1|YIP3 Rab acceptor 1 protein-coding chr3-989 chr3 100992426 100992670 + 19.8 0.000 intron (NM_001349332, intron 1 of 35) intron (NM_001349332, intron 1 of 35) 942 NM_001349329 25890 Hs.477015 NM_015429 ENSG00000154175 ABI3BP NESHBP|TARSH ABI family member 3 binding protein protein-coding chr11-1043 chr11 919104 919348 + 19.8 0.000 Intergenic Intergenic -4168 NM_001142675 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr8-348 chr8 73294041 73294285 + 19.8 0.000 promoter-TSS (NM_000971) promoter-TSS (NM_000971) 303 NM_001363737 6129 Hs.421257 NM_000971 ENSG00000147604 RPL7 L7|humL7-1 ribosomal protein L7 protein-coding chr21-177 chr21 42525152 42525396 + 19.8 0.000 intron (NM_001320537, intron 2 of 19) MER21C|LTR|ERVL 11422 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr17-1037 chr17 75625890 75626134 + 19.8 0.000 TTS (NM_004259) TTS (NM_004259) -7422 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr7-375 chr7 21945802 21946046 + 19.8 0.000 promoter-TSS (NM_018719) promoter-TSS (NM_018719) -25 NM_001127371 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding chr7-837 chr7 54664384 54664628 + 19.8 0.000 Intergenic CpG 94705 NM_014302 23480 Hs.488282 NM_014302 ENSG00000132432 SEC61G SSS1 SEC61 translocon gamma subunit protein-coding chr14-409 chr14 52314001 52314245 + 19.8 0.000 promoter-TSS (NM_000956) promoter-TSS (NM_000956) -189 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding chr19-606 chr19 48390627 48390871 + 19.8 0.000 intron (NM_006801, intron 1 of 4) intron (NM_006801, intron 1 of 4) 802 NM_006801 10945 Hs.515515 NM_006801 ENSG00000105438 KDELR1 ERD2|ERD2.1|HDEL|PM23 KDEL endoplasmic reticulum protein retention receptor 1 protein-coding chr2-313 chr2 27078450 27078694 + 19.8 0.000 promoter-TSS (NM_007046) promoter-TSS (NM_007046) -43 NM_007046 11117 Hs.63348 NM_007046 ENSG00000138080 EMILIN1 EMI|EMILIN|gp115 elastin microfibril interfacer 1 protein-coding chr12-871 chr12 92369654 92369898 + 19.8 0.000 Intergenic Intergenic -51755 NR_027932 574028 Hs.730377 NM_001025233 ENSG00000257127 CLLU1 - chronic lymphocytic leukemia up-regulated 1 ncRNA chr4-763 chr4 158810045 158810289 + 19.8 0.000 intron (NM_001366843, intron 1 of 17) intron (NM_001366843, intron 1 of 17) 4328 NM_001366843 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr2-1962 chr2 231594258 231594502 + 19.8 0.000 TTS (NM_152614) TTS (NM_152614) 1516 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr3-466 chr3 25713586 25713830 + 19.8 0.000 Intergenic MLT1F|LTR|ERVL-MaLR -48769 NR_039644 100616477 NR_039644 ENSG00000283971 MIR4442 mir-4442 microRNA 4442 ncRNA chr8-674 chr8 114384101 114384345 + 19.8 0.000 Intergenic Intergenic -947284 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr16-330 chr16 1446868 1447112 + 19.8 0.000 intron (NM_001287, intron 24 of 24) intron (NM_001287, intron 24 of 24) -2501 NM_001143980 645811 Hs.355232 NM_001143980 ENSG00000197599 CCDC154 C16orf29 coiled-coil domain containing 154 protein-coding chr12-1102 chr12 49751042 49751286 + 19.8 0.000 intron (NM_001098576, intron 1 of 9) intron (NM_001098576, intron 1 of 9) 9355 NM_001098576 7009 Hs.743965 NM_003217 ENSG00000139644 TMBIM6 BAXI1|BI-1|TEGT transmembrane BAX inhibitor motif containing 6 protein-coding chr7-992 chr7 95608826 95609070 + 19.8 0.000 Intergenic Intergenic -12432 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding chr15-203 chr15 70778753 70778997 + 19.8 0.000 Intergenic L2a|LINE|L2 -15317 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr11-760 chr11 94543996 94544240 + 19.8 0.000 5' UTR (NM_002033, exon 1 of 1) 5' UTR (NM_002033, exon 1 of 1) 267 NM_002033 2526 Hs.390420 NM_002033 ENSG00000196371 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 protein-coding chr16-1211 chr16 85849902 85850146 + 19.8 0.000 Intergenic MIRb|SINE|MIR -49138 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr4-1069 chr4 139266666 139266910 + 19.8 0.000 exon (NM_032623, exon 4 of 4) exon (NM_032623, exon 4 of 4) 13437 NM_032623 84709 Hs.710036 NM_032623 ENSG00000137463 MGARP C4orf49|CESP-1|HUMMR|OSAP mitochondria localized glutamic acid rich protein protein-coding chr1-1381 chr1 115679261 115679505 + 19.8 0.000 intron (NM_001172411, intron 4 of 7) intron (NM_001172411, intron 4 of 7) 36754 NM_001172412 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding chr1-1790 chr1 89274637 89274881 + 19.8 0.000 Intergenic Intergenic -1899 NM_052942 115362 Hs.513726 NM_052942 ENSG00000154451 GBP5 GBP-5 guanylate binding protein 5 protein-coding chr12-723 chr12 3061237 3061481 + 19.8 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -15996 NM_001168320 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr22-402 chr22 40512399 40512643 + 19.8 0.000 intron (NM_020831, intron 3 of 14) intron (NM_020831, intron 3 of 14) -9279 NR_109965 101927257 Hs.662725 NR_109965 ENSG00000232564 MRTFA-AS1 - MRTFA antisense RNA 1 ncRNA chr2-1115 chr2 120597206 120597450 + 19.8 0.000 Intergenic Intergenic -130979 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr7-756 chr7 93890592 93890836 + 19.8 0.000 promoter-TSS (NM_001271004) promoter-TSS (NM_001271004) 39 NM_006528 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding chr20-477 chr20 28842298 28842542 + 19.8 0.000 Intergenic ALR/Alpha|Satellite|centr -237970 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr11-546 chr11 1437616 1437860 + 19.8 0.000 intron (NM_003957, intron 2 of 19) intron (NM_003957, intron 2 of 19) 26586 NM_001256630 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr5-522 chr5 892621 892865 + 19.8 0.000 promoter-TSS (NR_134296) promoter-TSS (NR_134296) 58 NM_023924 65980 Hs.449278 NM_023924 ENSG00000028310 BRD9 LAVS3040|PRO9856 bromodomain containing 9 protein-coding chr18-191 chr18 75408926 75409170 + 19.8 0.000 TTS (NM_001037331) TTS (NM_001037331) 18655 NM_001303482 284274 Hs.666744 NM_001037331 ENSG00000206026 SMIM21 C18orf62 small integral membrane protein 21 protein-coding chr3-1406 chr3 130893027 130893271 + 19.8 0.000 promoter-TSS (NM_001199183) promoter-TSS (NM_001199183) -866 NM_001001485 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr1-1204 chr1 164707051 164707295 + 19.8 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 67468 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr13-340 chr13 74206408 74206652 + 19.8 0.000 Intergenic Intergenic -24914 NR_144451 100507612 Hs.447508 NR_144451 ENSG00000235532 LINC00402 - long intergenic non-protein coding RNA 402 ncRNA chr1-1780 chr1 81832686 81832930 + 19.8 0.000 intron (NM_001366002, intron 2 of 20) intron (NM_001366002, intron 2 of 20) 30355 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding chr17-921 chr17 3627175 3627419 + 19.8 0.000 intron (NM_013276, intron 2 of 6) intron (NM_013276, intron 2 of 6) 8953 NM_013276 23729 Hs.579217 NM_013276 ENSG00000197417 SHPK CARKL|SHK sedoheptulokinase protein-coding chr12-318 chr12 8742600 8742844 + 19.8 0.000 intron (NR_147950, intron 2 of 8) intron (NR_147950, intron 2 of 8) 44731 NR_147948 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr1-2684 chr1 241153306 241153550 + 19.8 0.000 intron (NM_001282778, intron 2 of 16) intron (NM_001282778, intron 2 of 16) 21156 NR_036069 100422856 NR_036069 ENSG00000265831 MIR3123 mir-3123 microRNA 3123 ncRNA chr5-503 chr5 156359591 156359835 + 19.8 0.000 intron (NM_001128209, intron 2 of 7) intron (NM_001128209, intron 2 of 7) 32549 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr7-455 chr7 7157214 7157458 + 19.8 0.000 Intergenic Intergenic -25279 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr2-1369 chr2 215410853 215411097 + 19.8 0.000 intron (NM_212482, intron 13 of 45) intron (NM_212482, intron 13 of 45) 25093 NM_001365518 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr12-708 chr12 124971318 124971562 + 19.8 0.000 intron (NM_032656, intron 7 of 26) intron (NM_032656, intron 7 of 26) 17691 NM_032656 57647 Hs.107382 NM_032656 ENSG00000150990 DHX37 DDX37|Dhr1 DEAH-box helicase 37 protein-coding chr10-853 chr10 70382682 70382926 + 19.8 0.000 promoter-TSS (NM_001278214) promoter-TSS (NM_001278214) -154 NM_001278214 55222 Hs.7778 NM_018205 ENSG00000172731 LRRC20 - leucine rich repeat containing 20 protein-coding chr1-1642 chr1 6625611 6625855 + 19.8 0.000 intron (NM_001195752, intron 1 of 4) CpG 583 NM_138350 90326 Hs.689006 NM_138350 ENSG00000041988 THAP3 - THAP domain containing 3 protein-coding chr19-1060 chr19 5666222 5666466 + 19.8 0.000 intron (NM_001201340, intron 16 of 19) intron (NM_001201340, intron 16 of 19) 13894 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr16-244 chr16 70681778 70682022 + 19.8 0.000 intron (NM_138383, intron 1 of 14) intron (NM_138383, intron 1 of 14) 4153 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr8-900 chr8 80991881 80992125 + 19.8 0.000 intron (NM_018440, intron 4 of 8) intron (NM_018440, intron 4 of 8) -117222 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr16-931 chr16 11585929 11586173 + 19.8 0.000 intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 322 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr16-444 chr16 84228317 84228561 + 19.8 0.000 intron (NM_172347, intron 2 of 2) intron (NM_172347, intron 2 of 2) 11311 NM_172347 93107 Hs.335877 NM_133490 ENSG00000168418 KCNG4 KV6.3|KV6.4 potassium voltage-gated channel modifier subfamily G member 4 protein-coding chr3-318 chr3 160565042 160565286 + 19.8 0.000 intron (NM_002268, intron 1 of 16) CpG 407 NM_002268 3840 Hs.467866 NM_002268 ENSG00000186432 KPNA4 IPOA3|QIP1|SRP3 karyopherin subunit alpha 4 protein-coding chr17-846 chr17 20085468 20085712 + 19.8 0.000 intron (NM_001243439, intron 1 of 14) intron (NM_001243439, intron 1 of 14) -1432 NM_001033553 92521 Hs.431045 NM_152904 ENSG00000128487 SPECC1 CYTSB|HCMOGT-1|HCMOGT1|NSP sperm antigen with calponin homology and coiled-coil domains 1 protein-coding chr17-665 chr17 81898681 81898925 + 19.8 0.000 intron (NM_001289418, intron 2 of 2) intron (NM_001289418, intron 2 of 2) -3435 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr1-1779 chr1 79657939 79658183 + 19.8 0.000 Intergenic Intergenic -651331 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding chr14-663 chr14 94771984 94772228 + 19.8 0.000 intron (NR_144432, intron 1 of 1) intron (NR_144432, intron 1 of 1) 1464 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr1-1858 chr1 164707614 164707858 + 19.8 0.000 intron (NM_001204963, intron 2 of 8) intron (NM_001204963, intron 2 of 8) 66905 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr9-869 chr9 32767119 32767363 + 19.8 0.000 Intergenic LTR79|LTR|ERVL -16299 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding chr3-790 chr3 157159854 157160098 + 19.8 0.000 exon (NM_020307, exon 1 of 11) exon (NM_020307, exon 1 of 11) 784 NM_001308185 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr12-587 chr12 75944087 75944331 + 19.8 0.000 Intergenic Intergenic 87567 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr3-547 chr3 187809085 187809329 + 19.8 0.000 Intergenic Intergenic -63739 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr2-875 chr2 220105153 220105397 + 19.8 0.000 Intergenic Intergenic -198710 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr19-792 chr19 7903608 7903852 + 19.8 0.000 promoter-TSS (NM_001297556) promoter-TSS (NM_001297556) -147 NM_145185 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding chr1-1409 chr1 167600215 167600459 + 19.8 0.000 Intergenic Intergenic -29856 NM_001322923 92241 Hs.493867 NM_052862 ENSG00000198771 RCSD1 CAPZIP|MK2S4 RCSD domain containing 1 protein-coding chr19-1059 chr19 5421939 5422183 + 19.8 0.000 Intergenic LTR22C2|LTR|ERVK -33356 NM_181710 148066 Hs.126496 NM_181710 ENSG00000105428 ZNRF4 RNF204|SPERIZIN|Ssrzf1|spzn zinc and ring finger 4 protein-coding chr8-443 chr8 42407806 42408050 + 19.8 0.000 Intergenic Intergenic 16048 NM_005662 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr9-644 chr9 34446532 34446776 + 19.8 0.000 intron (NM_001184942, intron 1 of 5) L3|LINE|CR1 11916 NM_001184943 203259 Hs.493771 NM_147202 ENSG00000164970 FAM219A C9orf25 family with sequence similarity 219 member A protein-coding chr8-161 chr8 89757662 89757906 + 19.8 0.000 promoter-TSS (NM_003821) promoter-TSS (NM_003821) -32 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding chr19-1515 chr19 11560553 11560797 + 19.8 0.000 Intergenic Tigger5b|DNA|TcMar-Tigger -1439 NM_032377 84337 Hs.631633 NM_032377 ENSG00000130165 ELOF1 ELF1 elongation factor 1 homolog protein-coding chr10-1143 chr10 44046202 44046446 + 19.8 0.000 Intergenic Intergenic 133922 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr2-861 chr2 159516252 159516496 + 19.8 0.000 intron (NM_001329858, intron 2 of 36) intron (NM_001329858, intron 2 of 36) -98920 NR_110588 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA chr5-1070 chr5 96384487 96384731 + 19.7 0.000 intron (NR_130776, intron 4 of 4) intron (NR_130776, intron 4 of 4) 47550 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chrX-156 chrX 46573664 46573908 + 19.7 0.000 promoter-TSS (NM_019886) promoter-TSS (NM_019886) 21 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chr3-1266 chr3 47007902 47008146 + 19.7 0.000 intron (NM_001365116, intron 48 of 52) intron (NM_001365116, intron 48 of 52) -3518 NR_024046 100129354 Hs.201522 NR_024046 NRADDP - neurotrophin receptor associated death domain, pseudogene pseudo chr12-1056 chr12 13826489 13826733 + 19.7 0.000 intron (NM_000834, intron 2 of 12) L1MEc|LINE|L1 153745 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding chr20-193 chr20 4665617 4665861 + 19.7 0.000 Intergenic LTR8|LTR|ERV1 -20717 NM_000311 5621 Hs.472010 NM_000311 ENSG00000171867 PRNP ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30 prion protein protein-coding chr2-363 chr2 65227538 65227782 + 19.7 0.000 promoter-TSS (NM_005722) promoter-TSS (NM_005722) -35 NM_001005386 10097 Hs.643727 NM_005722 ENSG00000138071 ACTR2 ARP2 actin related protein 2 protein-coding chr3-462 chr3 196317596 196317840 + 19.7 0.000 promoter-TSS (NR_121665) promoter-TSS (NR_121665) 522 NM_001351628 255758 Hs.733180 NM_152773 ENSG00000213123 TCTEX1D2 SRTD17 Tctex1 domain containing 2 protein-coding chr4-400 chr4 25312742 25312986 + 19.7 0.000 promoter-TSS (NM_024936) promoter-TSS (NM_024936) 90 NM_024936 29063 Hs.278945 NM_024936 ENSG00000168228 ZCCHC4 HSPC052|ZGRF4 zinc finger CCHC-type containing 4 protein-coding chr3-824 chr3 27312170 27312414 + 19.7 0.000 intron (NM_152534, intron 8 of 38) intron (NM_152534, intron 8 of 38) 57091 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding chr2-722 chr2 8681820 8682064 + 19.7 0.000 promoter-TSS (NR_110154) promoter-TSS (NR_110154) -79 NR_110154 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr22-690 chr22 38397562 38397806 + 19.7 0.000 intron (NR_002821, intron 1 of 4) intron (NR_002821, intron 1 of 4) 1231 NM_001289912 102800317 Hs.720223 NM_001289912 ENSG00000283900 TPTEP2-CSNK1E LOC400927-CSNK1E TPTEP2-CSNK1E readthrough protein-coding chr1-2574 chr1 180765238 180765482 + 19.7 0.000 intron (NR_137330, intron 2 of 12) intron (NR_137330, intron 2 of 12) 133338 NM_001135669 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding chr6-1068 chr6 129590509 129590753 + 19.7 0.000 intron (NM_033515, intron 12 of 14) intron (NM_033515, intron 12 of 14) 119546 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr12-640 chr12 49253015 49253259 + 19.7 0.000 intron (NM_001303114, intron 1 of 3) L2|LINE|L2 -11945 NM_032704 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr1-617 chr1 226408109 226408353 + 19.7 0.000 promoter-TSS (NM_001618) promoter-TSS (NM_001618) -138 NM_001618 142 Hs.177766 NM_001618 ENSG00000143799 PARP1 ADPRT|ADPRT 1|ADPRT1|ARTD1|PARP|PARP-1|PPOL|pADPRT-1 poly(ADP-ribose) polymerase 1 protein-coding chr21-149 chr21 42992464 42992708 + 19.7 0.000 intron (NM_004571, intron 1 of 10) MLT1G3|LTR|ERVL-MaLR 18024 NM_004571 5316 Hs.431043 NM_004571 ENSG00000160199 PKNOX1 PREP1|pkonx1c PBX/knotted 1 homeobox 1 protein-coding chr17-486 chr17 40108260 40108504 + 19.7 0.000 Intergenic Intergenic -7793 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr5-1194 chr5 178895793 178896037 + 19.7 0.000 promoter-TSS (NM_030613) promoter-TSS (NM_030613) 2 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding chr2-1714 chr2 62137485 62137729 + 19.7 0.000 Intergenic Intergenic -58508 NM_006577 10678 Hs.173203 NM_006577 ENSG00000170340 B3GNT2 3-Gn-T1|3-Gn-T2|B3GN-T2|B3GNT|B3GNT-2|B3GNT1|BETA3GNT|BGNT2|BGnT-2|beta-1|beta3Gn-T1|beta3Gn-T2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding chr8-335 chr8 27334419 27334663 + 19.7 0.000 intron (NM_173175, intron 1 of 29) intron (NM_173175, intron 1 of 29) 8977 NM_173175 2185 Hs.491322 NM_004103 ENSG00000120899 PTK2B CADTK|CAKB|FADK2|FAK2|PKB|PTK|PYK2|RAFTK protein tyrosine kinase 2 beta protein-coding chr9-1170 chr9 6247528 6247772 + 19.7 0.000 promoter-TSS (NM_001353802) promoter-TSS (NM_001353802) -821 NM_001353802 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding chr10-715 chr10 1061871 1062115 + 19.7 0.000 intron (NM_014023, intron 1 of 13) Tigger4b|DNA|TcMar-Tigger -5289 NM_001317955 3422 Hs.283652 NM_004508 ENSG00000067064 IDI1 IPP1|IPPI1 isopentenyl-diphosphate delta isomerase 1 protein-coding chr10-757 chr10 116682361 116682605 + 19.7 0.000 intron (NM_001330164, intron 8 of 12) intron (NM_001330164, intron 8 of 12) -12201 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr3-519 chr3 42651564 42651808 + 19.7 0.000 intron (NR_125400, intron 1 of 2) intron (NR_125400, intron 1 of 2) -2011 NM_145166 92999 Hs.409561 NM_145166 ENSG00000114853 ZBTB47 ZNF651 zinc finger and BTB domain containing 47 protein-coding chr1-1149 chr1 32215680 32215924 + 19.7 0.000 TTS (NM_001366191) TTS (NM_001366191) -5782 NM_003757 8668 Hs.530096 NM_003757 ENSG00000084623 EIF3I EIF3S2|PRO2242|TRIP-1|TRIP1|eIF3-beta|eIF3-p36 eukaryotic translation initiation factor 3 subunit I protein-coding chr12-667 chr12 76266945 76267189 + 19.7 0.000 intron (NR_146531, intron 1 of 3) intron (NR_146531, intron 1 of 3) 7184 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr17-1420 chr17 77457947 77458191 + 19.7 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) 4042 NM_001293698 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr4-303 chr4 158887700 158887944 + 19.7 0.000 intron (NM_001346043, intron 13 of 15) intron (NM_001346043, intron 13 of 15) 81983 NM_001366843 57600 Hs.652441 NM_020840 ENSG00000052795 FNIP2 FNIPL|MAPO1 folliculin interacting protein 2 protein-coding chr15-168 chr15 92803945 92804189 + 19.7 0.000 Intergenic Intergenic 8583 NR_033769 728619 Hs.684129 NR_033769 ASB9P1 - ankyrin repeat and SOCS box containing 9 pseudogene 1 pseudo chr12-896 chr12 115096784 115097028 + 19.7 0.000 Intergenic Intergenic -412731 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr2-719 chr2 3650973 3651217 + 19.7 0.000 Intergenic CpG -7105 NM_018436 55821 Hs.97899 NM_018436 ENSG00000151360 ALLC ALC allantoicase protein-coding chrX-133 chrX 150568743 150568987 + 19.7 0.000 intron (NM_000252, intron 1 of 14) CpG 268 NM_000252 4534 Hs.655056 NM_000252 ENSG00000171100 MTM1 CNM|MTMX|XLMTM myotubularin 1 protein-coding chr10-1075 chr10 910601 910845 + 19.7 0.000 intron (NM_001351277, intron 1 of 17) intron (NM_001351277, intron 1 of 17) 20982 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr12-770 chr12 107843656 107843900 + 19.7 0.000 Intergenic CpG 59993 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr2-1341 chr2 180341270 180341514 + 19.7 0.000 Intergenic MER61A|LTR|ERV1 -334095 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding chr19-1344 chr19 13106148 13106392 + 19.7 0.000 intron (NM_001136035, intron 14 of 16) AluJo|SINE|Alu -3412 NM_005583 4066 Hs.46446 NM_005583 ENSG00000104903 LYL1 bHLHa18 LYL1 basic helix-loop-helix family member protein-coding chr20-100 chr20 54475342 54475586 + 19.7 0.000 promoter-TSS (NM_001294161) promoter-TSS (NM_001294161) -129 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding chr10-584 chr10 73495537 73495781 + 19.7 0.000 promoter-TSS (NR_132103) promoter-TSS (NR_132103) -93 NR_132104 101929145 Hs.434502 NR_132103 ENSG00000221817 PPP3CB-AS1 USP54-AS1 PPP3CB antisense RNA 1 (head to head) ncRNA chr5-403 chr5 177302518 177302762 + 19.7 0.000 exon (NM_130781, exon 5 of 9) exon (NM_130781, exon 5 of 9) 1079 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr12-239 chr12 50084956 50085200 + 19.7 0.000 promoter-TSS (NM_003076) promoter-TSS (NM_003076) -264 NM_003076 6602 Hs.79335 NM_003076 ENSG00000066117 SMARCD1 BAF60A|CRACD1|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 protein-coding chr16-1203 chr16 85602204 85602448 + 19.7 0.000 Intergenic Intergenic -9083 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr16-1082 chr16 20911390 20911634 + 19.7 0.000 intron (NR_161427, intron 2 of 2) intron (NR_161427, intron 2 of 2) 10250 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr17-827 chr17 81917749 81917993 + 19.7 0.000 TTS (NM_032711) TTS (NM_032711) 305 NM_016538 51547 Hs.514636 NM_016538 ENSG00000187531 SIRT7 SIR2L7 sirtuin 7 protein-coding chr12-872 chr12 93163603 93163847 + 19.7 0.000 intron (NR_040096, intron 3 of 4) L3|LINE|CR1 -10641 NR_120492 102724933 Hs.663947 NR_120492 ENSG00000258171 LINC02412 - long intergenic non-protein coding RNA 2412 ncRNA chr1-693 chr1 26807061 26807305 + 19.7 0.000 Intergenic AluSx1|SINE|Alu 18995 NM_001202554 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr2-1807 chr2 120291803 120292047 + 19.7 0.000 intron (NM_001369400, intron 4 of 4) intron (NM_001369400, intron 4 of 4) 39073 NM_002881 5899 Hs.469820 NM_002881 ENSG00000144118 RALB - RAS like proto-oncogene B protein-coding chr11-768 chr11 118870357 118870601 + 19.7 0.000 Intergenic Intergenic -13413 NM_001716 643 Hs.113916 NM_001716 ENSG00000160683 CXCR5 BLR1|CD185|MDR15 C-X-C motif chemokine receptor 5 protein-coding chr16-1132 chr16 57367526 57367770 + 19.7 0.000 Intergenic L1MC5a|LINE|L1 -4842 NM_001304392 6376 Hs.531668 NM_002996 ENSG00000006210 CX3CL1 ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin C-X3-C motif chemokine ligand 1 protein-coding chr22-283 chr22 31977324 31977568 + 19.7 0.000 intron (NR_149128, intron 2 of 4) intron (NR_149128, intron 2 of 4) 6623 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA chr9-1089 chr9 97307240 97307484 + 19.7 0.000 promoter-TSS (NM_020893) promoter-TSS (NM_020893) 25 NM_001348010 100499483 Hs.435629 NM_020893 ENSG00000197816 CCDC180 C9orf174 coiled-coil domain containing 180 protein-coding chr5-1139 chr5 142319370 142319614 + 19.7 0.000 intron (NM_001127496, intron 1 of 1) intron (NM_001127496, intron 1 of 1) -1170 NR_131221 100642175 Hs.684549 NR_131221 SPRY4-IT1 SPRIGHTLY SPRY4 intronic transcript 1 ncRNA chr7-973 chr7 74569568 74569812 + 19.7 0.000 intron (NM_016328, intron 22 of 26) intron (NM_016328, intron 22 of 26) -26278 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr2-1576 chr2 237280265 237280509 + 19.7 0.000 Intergenic Intergenic 133777 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr16-1140 chr16 64910083 64910327 + 19.7 0.000 Intergenic Intergenic 211858 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr14-243 chr14 92106356 92106600 + 19.7 0.000 intron (NR_028468, intron 1 of 8) CpG 104 NR_031765 4287 Hs.532632 NM_004993 ENSG00000066427 ATXN3 AT3|ATX3|JOS|MJD|MJD1|SCA3 ataxin 3 protein-coding chr13-231 chr13 30158876 30159120 + 19.7 0.000 Intergenic Intergenic -5924 NR_138041 102157400 Hs.639879 NR_138041 LINC00384 - long intergenic non-protein coding RNA 384 ncRNA chr5-438 chr5 218517 218761 + 19.7 0.000 promoter-TSS (NM_145265) promoter-TSS (NM_145265) 319 NM_004168 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr2-1499 chr2 110806452 110806696 + 19.7 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 74001 NM_001371254 chr1-2473 chr1 109613606 109613850 + 19.7 0.000 promoter-TSS (NM_005272) promoter-TSS (NM_005272) -644 NM_005272 2780 Hs.36973 NM_005272 ENSG00000134183 GNAT2 ACHM4|GNATC G protein subunit alpha transducin 2 protein-coding chr14-739 chr14 69101335 69101579 + 19.7 0.000 intron (NM_003861, intron 5 of 8) intron (NM_003861, intron 5 of 8) 51142 NM_001284207 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding chr10-489 chr10 132776780 132777024 + 19.7 0.000 intron (NM_005539, intron 12 of 15) intron (NM_005539, intron 12 of 15) 9245 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr9-1017 chr9 134794992 134795236 + 19.7 0.000 exon (NM_000093, exon 33 of 66) exon (NM_000093, exon 33 of 66) 54255 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr3-375 chr3 122564157 122564401 + 19.7 0.000 promoter-TSS (NM_001146106) promoter-TSS (NM_001146106) 21 NM_001146104 83666 Hs.518200 NM_031458 ENSG00000138496 PARP9 ARTD9|BAL|BAL1|MGC:7868 poly(ADP-ribose) polymerase family member 9 protein-coding chr19-968 chr19 18869894 18870138 + 19.7 0.000 exon (NM_001492, exon 7 of 8) exon (NM_001492, exon 7 of 8) 26142 NM_021267 10715 Hs.412355 NM_021267 ENSG00000223802 CERS1 EPM8|GDF-1|GDF1|LAG1|LASS1|UOG1 ceramide synthase 1 protein-coding chr1-1488 chr1 12231106 12231350 + 19.7 0.000 intron (NM_015378, intron 1 of 69) intron (NM_015378, intron 1 of 69) 1198 NM_018156 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr6-904 chr6 8941687 8941931 + 19.7 0.000 Intergenic Intergenic 289600 NR_004855 728655 Hs.214343 NR_004855 HULC HCCAT1|LINC00078|NCRNA00078 hepatocellular carcinoma up-regulated long non-coding RNA ncRNA chr3-1499 chr3 194608040 194608284 + 19.7 0.000 intron (NM_001011655, intron 8 of 9) intron (NM_001011655, intron 8 of 9) 23894 NR_047573 100507297 Hs.586059 NR_047573 TMEM44-AS1 - TMEM44 antisense RNA 1 ncRNA chr19-1631 chr19 45323853 45324097 + 19.7 0.000 Intergenic Intergenic -1100 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr1-1864 chr1 166055325 166055569 + 19.7 0.000 TTS (NM_001320302) TTS (NM_001320302) 99351 NR_030626 100126349 NR_030626 ENSG00000215952 MIR921 MIRN921|hsa-mir-921 microRNA 921 ncRNA chr11-1450 chr11 34427383 34427627 + 19.7 0.000 Intergenic Intergenic -11429 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding chr9-1325 chr9 125970496 125970740 + 19.7 0.000 Intergenic Intergenic 222435 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr5-813 chr5 145941403 145941647 + 19.7 0.000 intron (NM_152550, intron 2 of 9) intron (NM_152550, intron 2 of 9) 4947 NM_152550 153769 Hs.443728 NM_152550 ENSG00000156463 SH3RF2 HEPP1|POSHER|PPP1R39|RNF158 SH3 domain containing ring finger 2 protein-coding chr16-617 chr16 1311765 1312009 + 19.7 0.000 intron (NM_003345, intron 1 of 6) intron (NM_003345, intron 1 of 6) 2251 NM_194259 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr8-354 chr8 103105294 103105538 + 19.7 0.000 Intergenic Intergenic -15616 NR_145429 379034 Hs.591862 NR_145429 LINC01181 - long intergenic non-protein coding RNA 1181 ncRNA chr11-1489 chr11 47863272 47863516 + 19.7 0.000 Intergenic Intergenic -14850 NM_001318399 23279 Hs.643526 NM_015231 ENSG00000030066 NUP160 NPHS19 nucleoporin 160 protein-coding chr3-342 chr3 52238942 52239186 + 19.7 0.000 promoter-TSS (NM_007284) promoter-TSS (NM_007284) 94 NM_007284 11344 Hs.436439 NM_007284 ENSG00000247596 TWF2 A6RP|A6r|MSTP011|PTK9L twinfilin actin binding protein 2 protein-coding chr2-696 chr2 158394549 158394793 + 19.7 0.000 intron (NM_138803, intron 1 of 13) intron (NM_138803, intron 1 of 13) 62082 NM_001301684 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding chr11-782 chr11 3164068 3164312 + 19.7 0.000 intron (NM_145638, intron 1 of 20) intron (NM_145638, intron 1 of 20) 1120 NM_001144063 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr16-889 chr16 88466298 88466542 + 19.7 0.000 intron (NM_153813, intron 1 of 9) MIRb|SINE|MIR -2498 NR_049821 100847057 NR_049821 ENSG00000263456 MIR5189 mir-5189 microRNA 5189 ncRNA chr1-1308 chr1 29829127 29829371 + 19.7 0.000 Intergenic Intergenic 208363 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr6-976 chr6 43254591 43254835 + 19.7 0.000 intron (NM_032538, intron 6 of 14) intron (NM_032538, intron 6 of 14) 11232 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr1-2456 chr1 95965900 95966144 + 19.7 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger -26046 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr19-1295 chr19 52962029 52962273 + 19.7 0.000 intron (NM_001031665, intron 1 of 4) HERVE-int|LTR|ERV1 730 NM_001202457 125893 Hs.655592 NM_001031665 ENSG00000180257 ZNF816 ZNF816A zinc finger protein 816 protein-coding chr7-940 chr7 43756636 43756880 + 19.7 0.000 Intergenic Intergenic -1915 NM_001253823 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chrX-123 chrX 49878934 49879178 + 19.7 0.000 promoter-TSS (NM_001145073) promoter-TSS (NM_001145073) 300 NR_026742 158572 Hs.408191 NM_001025449 ENSG00000234390 USP27X-AS1 - USP27X antisense RNA 1 (head to head) ncRNA chr4-377 chr4 117085312 117085556 + 19.7 0.000 5' UTR (NM_152402, exon 1 of 1) 5' UTR (NM_152402, exon 1 of 1) 142 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding chr13-474 chr13 50626127 50626371 + 19.7 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -98800 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr9-1254 chr9 94922268 94922512 + 19.7 0.000 intron (NM_032823, intron 5 of 14) intron (NM_032823, intron 5 of 14) 23164 NR_147614 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr16-1114 chr16 51555471 51555715 + 19.7 0.000 Intergenic Intergenic -206926 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA chr15-688 chr15 73601200 73601444 + 19.7 0.000 intron (NM_012428, intron 1 of 8) intron (NM_012428, intron 1 of 8) -31779 NR_103844 101241892 Hs.656678 NR_103844 ENSG00000281183 NPTN-IT1 lncRNA-LET NPTN intronic transcript 1 ncRNA chr17-1233 chr17 7782227 7782471 + 19.7 0.000 intron (NM_020877, intron 39 of 85) L1MEd|LINE|L1 28029 NR_002778 118432 Hs.658086 NR_002778 ENSG00000240480 RPL29P2 RPL29_10_1510 ribosomal protein L29 pseudogene 2 pseudo chr11-1666 chr11 125343791 125344035 + 19.7 0.000 intron (NM_022062, intron 3 of 12) intron (NM_022062, intron 3 of 12) -151301 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding chr22-599 chr22 49754702 49754946 + 19.7 0.000 Intergenic Intergenic 69507 NM_001349940 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr3-1431 chr3 141530191 141530435 + 19.7 0.000 intron (NM_006506, intron 4 of 23) intron (NM_006506, intron 4 of 23) 43286 NM_001303245 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr1-1086 chr1 177571223 177571467 + 19.7 0.000 Intergenic Intergenic -129179 NR_110722 101928778 Hs.573792 NR_110722 ENSG00000236720 LINC01741 - long intergenic non-protein coding RNA 1741 ncRNA chr1-2682 chr1 239876588 239876832 + 19.7 0.000 intron (NM_001347716, intron 7 of 7) intron (NM_001347716, intron 7 of 7) 23162 NR_046582 100873984 Hs.199475 NR_046582 ENSG00000234601 CHRM3-AS1 - CHRM3 antisense RNA 1 ncRNA chr11-962 chr11 133998915 133999159 + 19.7 0.000 Intergenic Intergenic -33235 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr16-954 chr16 67965956 67966200 + 19.7 0.000 intron (NM_005072, intron 1 of 23) MIRc|SINE|MIR 716 NM_001145964 6560 Hs.10094 NM_005072 ENSG00000124067 SLC12A4 CTC-479C5.17|KCC1|hKCC1 solute carrier family 12 member 4 protein-coding chr3-1399 chr3 127911537 127911781 + 19.7 0.000 Intergenic Intergenic -3573 NM_207335 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr11-926 chr11 72662013 72662257 + 19.7 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) 6929 NM_001146209 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr6-422 chr6 143536668 143536912 + 19.7 0.000 Intergenic CpG -25070 NM_032020 2519 Hs.17680 NM_032020 ENSG00000001036 FUCA2 dJ20N2.5 alpha-L-fucosidase 2 protein-coding chr1-1417 chr1 182589019 182589263 + 19.7 0.000 intron (NM_021133, intron 1 of 6) intron (NM_021133, intron 1 of 6) 115 NM_021133 6041 Hs.518545 NM_021133 ENSG00000135828 RNASEL PRCA1|RNS4 ribonuclease L protein-coding chr22-539 chr22 46147737 46147981 + 19.7 0.000 Intergenic Intergenic -2667 NM_001362872 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chrX-60 chrX 48539519 48539763 + 19.7 0.000 promoter-TSS (NM_002536) promoter-TSS (NM_002536) 22 NR_145502 4943 Hs.694353 NM_002536 ENSG00000068354 TBC1D25 MG81|OATL1 TBC1 domain family member 25 protein-coding chrX-256 chrX 80415936 80416180 + 19.7 0.000 intron (NM_001170574, intron 3 of 4) L1PA14|LINE|L1 -4389 NM_152630 169966 Hs.367959 NM_152630 ENSG00000174016 TENT5D CT1.26|CT112|FAM46D terminal nucleotidyltransferase 5D protein-coding chr17-309 chr17 7929791 7930035 + 19.7 0.000 promoter-TSS (NM_004732) promoter-TSS (NM_004732) -478 NM_004732 9196 Hs.435074 NM_004732 ENSG00000170049 KCNAB3 AKR6A9|KCNA3.1B|KCNA3B|KV-BETA-3 potassium voltage-gated channel subfamily A regulatory beta subunit 3 protein-coding chr8-903 chr8 86176907 86177151 + 19.7 0.000 Intergenic Intergenic 53352 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr12-682 chr12 105852824 105853068 + 19.7 0.000 Intergenic MIRc|SINE|MIR 146172 NR_110110 101929110 Hs.145944 NR_110108 ENSG00000257859 CASC18 - cancer susceptibility 18 ncRNA chr15-232 chr15 68578545 68578789 + 19.7 0.000 promoter-TSS (NM_006091) promoter-TSS (NM_006091) -326 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr9-706 chr9 128721190 128721434 + 19.7 0.000 TTS (NM_001317926) TTS (NM_001317926) 2815 NM_032799 84885 Hs.133122 NM_032799 ENSG00000160446 ZDHHC12 DHHC-12|ZNF400 zinc finger DHHC-type containing 12 protein-coding chr1-814 chr1 17586202 17586446 + 19.7 0.000 intron (NR_137287, intron 2 of 29) MIR|SINE|MIR 5771 NM_001011722 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr11-555 chr11 11998455 11998699 + 19.7 0.000 intron (NM_015881, intron 4 of 7) intron (NM_015881, intron 4 of 7) 10062 NM_001018057 27122 Hs.292156 NM_013253 ENSG00000050165 DKK3 REIC|RIG dickkopf WNT signaling pathway inhibitor 3 protein-coding chr16-1064 chr16 9679014 9679258 + 19.7 0.000 Intergenic Intergenic -223631 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr21-199 chr21 15706789 15707033 + 19.7 0.000 Intergenic Intergenic -23023 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr12-292 chr12 28415839 28416083 + 19.7 0.000 intron (NM_001352082, intron 9 of 13) intron (NM_001352082, intron 9 of 13) -225223 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr3-1357 chr3 103736606 103736850 + 19.7 0.000 Intergenic L2a|LINE|L2 -212612 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA chr11-1297 chr11 61829248 61829492 + 19.7 0.000 intron (NM_004265, intron 1 of 11) intron (NM_004265, intron 1 of 11) 1070 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding chr16-681 chr16 88401671 88401915 + 19.7 0.000 Intergenic (GATG)n|Simple_repeat|Simple_repeat -25678 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr20-255 chr20 8414938 8415182 + 19.7 0.000 intron (NM_182734, intron 3 of 32) intron (NM_182734, intron 3 of 32) 166356 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA chr16-680 chr16 87688037 87688281 + 19.7 0.000 intron (NM_020655, intron 3 of 4) intron (NM_020655, intron 3 of 4) 77827 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding chr4-891 chr4 2271680 2271924 + 19.7 0.000 intron (NM_020972, intron 10 of 12) intron (NM_020972, intron 10 of 12) -9693 NM_006454 10608 Hs.655020 NM_006454 ENSG00000123933 MXD4 MAD4|MST149|MSTP149|bHLHc12 MAX dimerization protein 4 protein-coding chr6-742 chr6 148299795 148300039 + 19.7 0.000 intron (NM_001346505, intron 1 of 19) intron (NM_001346505, intron 1 of 19) 27589 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr7-626 chr7 38187029 38187273 + 19.7 0.000 intron (NM_001363344, intron 2 of 8) intron (NM_001363344, intron 2 of 8) 8906 NM_001363343 83930 Hs.309753 NM_032016 ENSG00000010270 STARD3NL MENTHO STARD3 N-terminal like protein-coding chr12-869 chr12 91355464 91355708 + 19.7 0.000 Intergenic Intergenic -172769 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding chr2-638 chr2 177552760 177553004 + 19.7 0.000 promoter-TSS (NM_152517) promoter-TSS (NM_152517) -86 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding chr2-1905 chr2 201652422 201652666 + 19.7 0.000 intron (NM_033066, intron 18 of 21) LTR78|LTR|ERV1 -9041 NM_001044385 65062 Hs.12319 NM_152388 ENSG00000155755 TMEM237 ALS2CR4|JBTS14 transmembrane protein 237 protein-coding chr18-185 chr18 61882655 61882899 + 19.5 0.000 intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 10230 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding chr15-179 chr15 64911537 64911781 + 19.5 0.000 promoter-TSS (NM_182703) promoter-TSS (NM_182703) -243 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr4-249 chr4 498965 499209 + 19.5 0.000 promoter-TSS (NM_133474) promoter-TSS (NM_133474) 69 NM_133474 170960 Hs.428360 NM_133474 ENSG00000182903 ZNF721 - zinc finger protein 721 protein-coding chrX-520 chrX 111002856 111003100 + 19.5 0.000 intron (NM_001128167, intron 1 of 14) MER5A|DNA|hAT-Charlie 58581 NM_001324325 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr12-257 chr12 131830300 131830544 + 19.5 0.000 intron (NM_016155, intron 1 of 9) CpG 2029 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr7-1327 chr7 77752233 77752477 + 19.5 0.000 intron (NM_198467, intron 3 of 7) intron (NM_198467, intron 3 of 7) 46079 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding chr1-1797 chr1 92080422 92080666 + 19.5 0.000 5' UTR (NM_183242, exon 1 of 9) 5' UTR (NM_183242, exon 1 of 9) 199 NM_183242 284697 Hs.676102 NM_183242 ENSG00000189195 BTBD8 - BTB domain containing 8 protein-coding chr3-965 chr3 50532127 50532371 + 19.5 0.000 Intergenic Intergenic -28005 NM_001291101 9254 Hs.476273 NM_006030 ENSG00000007402 CACNA2D2 CACNA2D calcium voltage-gated channel auxiliary subunit alpha2delta 2 protein-coding chr21-125 chr21 46325046 46325290 + 19.5 0.000 5' UTR (NM_001315529, exon 1 of 47) 5' UTR (NM_001315529, exon 1 of 47) 501 NM_001315529 5116 Hs.474069 NM_006031 ENSG00000160299 PCNT KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4 pericentrin protein-coding chr22-416 chr22 46135286 46135530 + 19.5 0.000 Intergenic Intergenic -15118 NM_001362872 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr12-503 chr12 6868001 6868245 + 19.5 0.000 promoter-TSS (NM_001258026) promoter-TSS (NM_001258026) 9 NM_001258026 7167 Hs.524219 NM_000365 ENSG00000111669 TPI1 HEL-S-49|TIM|TPI|TPID triosephosphate isomerase 1 protein-coding chr15-699 chr15 77456049 77456293 + 19.5 0.000 intron (NM_018200, intron 2 of 10) intron (NM_018200, intron 2 of 10) 35283 NM_001304504 10363 Hs.69594 NM_018200 ENSG00000140382 HMG20A HMGX1|HMGXB1 high mobility group 20A protein-coding chr1-1013 chr1 26772685 26772929 + 19.5 0.000 intron (NM_139135, intron 13 of 19) intron (NM_139135, intron 13 of 19) -15156 NM_017837 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr6-615 chr6 106628953 106629197 + 19.5 0.000 promoter-TSS (NM_018292) promoter-TSS (NM_018292) 423 NM_032730 84816 Hs.155839 NM_032730 ENSG00000130347 RTN4IP1 NIMP|OPA10 reticulon 4 interacting protein 1 protein-coding chr21-38 chr21 43361786 43362030 + 19.5 0.000 non-coding (NR_131902, exon 1 of 2) non-coding (NR_131902, exon 1 of 2) 441 NR_131902 101928399 Hs.517319 NR_131902 ENSG00000237989 LINC01679 TCONS_00029157 long intergenic non-protein coding RNA 1679 ncRNA chr1-2383 chr1 52368235 52368479 + 19.5 0.000 Intergenic L2a|LINE|L2 -2152 NM_001330585 200014 Hs.591451 NM_032449 ENSG00000154222 CC2D1B - coiled-coil and C2 domain containing 1B protein-coding chr11-937 chr11 93661605 93661849 + 19.5 0.000 promoter-TSS (NM_033395) promoter-TSS (NM_033395) 45 NM_033395 85459 Hs.458418 NM_033395 ENSG00000166004 CEP295 KIAA1731 centrosomal protein 295 protein-coding chr9-286 chr9 135501124 135501368 + 19.5 0.000 non-coding (NR_051969, exon 2 of 4) non-coding (NR_051969, exon 2 of 4) 564 NR_051968 51116 Hs.382044 NM_016034 ENSG00000122140 MRPS2 CGI-91|COXPD36|MRP-S2|S2mt mitochondrial ribosomal protein S2 protein-coding chr16-712 chr16 11757568 11757812 + 19.5 0.000 intron (NM_014153, intron 20 of 22) intron (NM_014153, intron 20 of 22) -14833 NM_001324022 51061 Hs.313847 NM_015914 ENSG00000153066 TXNDC11 EFP1 thioredoxin domain containing 11 protein-coding chr7-1140 chr7 104957208 104957452 + 19.5 0.000 Intergenic Intergenic -30685 NR_027374 723809 Hs.124316 NR_027374 ENSG00000225329 LHFPL3-AS2 - LHFPL3 antisense RNA 2 ncRNA chr9-1109 chr9 122234506 122234750 + 19.5 0.000 Intergenic MIRb|SINE|MIR -5671 NM_199160 26468 Hs.103137 NM_014368 ENSG00000106852 LHX6 LHX6.1 LIM homeobox 6 protein-coding chr8-839 chr8 30284447 30284691 + 19.5 0.000 Intergenic Intergenic -99932 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding chr2-2002 chr2 241367250 241367494 + 19.5 0.000 intron (NM_014808, intron 1 of 26) intron (NM_014808, intron 1 of 26) 11087 NM_014808 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding chr10-587 chr10 73911024 73911268 + 19.5 0.000 promoter-TSS (NM_002658) promoter-TSS (NM_002658) 14 NM_002658 5328 Hs.77274 NM_002658 ENSG00000122861 PLAU ATF|BDPLT5|QPD|UPA|URK|u-PA plasminogen activator, urokinase protein-coding chr16-1039 chr16 2124304 2124548 + 19.5 0.000 intron (NM_000296, intron 1 of 45) intron (NM_000296, intron 1 of 45) -8693 NR_039741 100616258 NR_039741 ENSG00000265867 MIR4516 mir-4516 microRNA 4516 ncRNA chrX-395 chrX 119871540 119871784 + 19.5 0.000 promoter-TSS (NM_006978) promoter-TSS (NM_006978) 71 NM_006978 7737 Hs.458365 NM_006978 ENSG00000125352 RNF113A Cwc24|RNF113|TTD5|ZNF183 ring finger protein 113A protein-coding chr19-1656 chr19 49937912 49938156 + 19.5 0.000 Intergenic Intergenic 4970 NR_039906 100616483 NR_039906 ENSG00000283842 MIR4751 - microRNA 4751 ncRNA chr1-2056 chr1 96362646 96362890 + 19.5 0.000 intron (NR_110693, intron 1 of 5) L2a|LINE|L2 11357 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA chr16-1129 chr16 57061474 57061718 + 19.5 0.000 intron (NM_001330552, intron 30 of 47) intron (NM_001330552, intron 30 of 47) -30987 NM_152727 221184 Hs.339809 NM_152727 ENSG00000140848 CPNE2 COPN2|CPN2 copine 2 protein-coding chr5-990 chr5 15807385 15807629 + 19.5 0.000 intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -127675 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr2-836 chr2 45962438 45962682 + 19.5 0.000 intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 310885 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr3-552 chr3 9363102 9363346 + 19.5 0.000 5' UTR (NM_015453, exon 1 of 10) 5' UTR (NM_015453, exon 1 of 10) 170 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding chr3-1040 chr3 157128150 157128394 + 19.5 0.000 Intergenic Intergenic -5270 NR_034007 339894 Hs.478050 NR_034007 ENSG00000243629 LINC00880 - long intergenic non-protein coding RNA 880 ncRNA chr4-509 chr4 17142358 17142602 + 19.5 0.000 Intergenic L2|LINE|L2 43577 NR_125919 101929123 Hs.638913 NR_125919 ENSG00000250819 LINC02493 - long intergenic non-protein coding RNA 2493 ncRNA chr20-402 chr20 9068095 9068339 + 19.5 0.000 promoter-TSS (NM_001172646) promoter-TSS (NM_001172646) -837 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr1-1383 chr1 120176417 120176661 + 19.5 0.000 promoter-TSS (NM_004892) promoter-TSS (NM_004892) -19 NM_004892 9554 Hs.632438 NM_004892 ENSG00000265808 SEC22B ERS-24|SEC22L1 SEC22 homolog B, vesicle trafficking protein (gene/pseudogene) protein-coding chr6-737 chr6 139403142 139403386 + 19.5 0.000 Intergenic Intergenic -28616 NM_006079 10370 Hs.82071 NM_006079 ENSG00000164442 CITED2 ASD8|MRG-1|MRG1|P35SRJ|VSD2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 protein-coding chr22-571 chr22 29704936 29705180 + 19.5 0.000 Intergenic Intergenic -14945 NM_182527 164633 Hs.643608 NM_182527 ENSG00000100314 CABP7 CALN2 calcium binding protein 7 protein-coding chr6-310 chr6 43509508 43509752 + 19.5 0.000 exon (NM_001012974, exon 1 of 6) exon (NM_001012974, exon 1 of 6) 713 NM_001012974 221424 Hs.445552 NM_001012974 ENSG00000204052 LRRC73 C6orf154 leucine rich repeat containing 73 protein-coding chr11-500 chr11 60915431 60915675 + 19.5 0.000 intron (NM_024092, intron 1 of 3) MER5B|DNA|hAT-Charlie 1395 NM_024092 79073 Hs.13662 NM_024092 ENSG00000110108 TMEM109 - transmembrane protein 109 protein-coding chr1-1702 chr1 27934856 27935100 + 19.5 0.000 promoter-TSS (NM_014474) promoter-TSS (NM_014474) -22 NM_014474 27293 Hs.123659 NM_014474 ENSG00000130768 SMPDL3B ASML3B sphingomyelin phosphodiesterase acid like 3B protein-coding chrX-267 chrX 129875682 129875926 + 19.5 0.000 Intergenic Intergenic -30317 NM_001166221 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr13-154 chr13 24728106 24728350 + 19.5 0.000 Intergenic Intergenic -35941 NM_031277 56163 Hs.97464 NM_031277 ENSG00000132972 RNF17 Mmip-2|SPATA23|TDRD4 ring finger protein 17 protein-coding chr7-595 chr7 127876461 127876705 + 19.5 0.000 intron (NM_014390, intron 12 of 23) intron (NM_014390, intron 12 of 23) -120926 NR_027330 27099 Hs.657377 NM_014411 ENSG00000279078 SND1-IT1 C7orf54|NAG8|NSG-X SND1 intronic transcript 1 ncRNA chr1-2530 chr1 156772346 156772590 + 19.5 0.000 intron (NM_005973, intron 1 of 6) intron (NM_005973, intron 1 of 6) 4933 NM_005973 5546 Hs.516948 NM_005973 ENSG00000143294 PRCC RCCP1|TPRC proline rich mitotic checkpoint control factor protein-coding chr9-316 chr9 134171996 134172240 + 19.5 0.000 Intergenic Intergenic -7554 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr12-777 chr12 122148465 122148709 + 19.5 0.000 Intergenic Intergenic -19132 NM_152759 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr8-403 chr8 91180278 91180522 + 19.5 0.000 intron (NR_148895, intron 7 of 10) MLT1F1|LTR|ERVL-MaLR -25085 NR_039805 100616245 NR_039805 ENSG00000266194 MIR4661 - microRNA 4661 ncRNA chr2-451 chr2 88497712 88497956 + 19.5 0.000 Intergenic Intergenic -26815 NM_152670 200523 Hs.132104 NM_152670 ENSG00000172073 TEX37 C2orf51|TSC21 testis expressed 37 protein-coding chr5-560 chr5 6712345 6712589 + 19.5 0.000 promoter-TSS (NM_006999) promoter-TSS (NM_006999) -965 NM_001171805 11044 Hs.481542 NM_006999 ENSG00000112941 TENT4A LAK-1|LAK1|PAPD7|POLK|POLS|TRF4|TRF4-1|TRF41|TUTASE5 terminal nucleotidyltransferase 4A protein-coding chr4-447 chr4 3815533 3815777 + 19.5 0.000 Intergenic (ACTAT)n|Simple_repeat|Simple_repeat 49270 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr7-761 chr7 99267807 99268051 + 19.5 0.000 Intergenic Intergenic -5372 NR_002147 84176 Hs.621401 NR_002147 MYH16 MHC20|MYH16P|MYH5 myosin heavy chain 16 pseudogene pseudo chr19-681 chr19 18649573 18649817 + 19.5 0.000 intron (NM_001345983, intron 1 of 2) intron (NM_001345983, intron 1 of 2) 5057 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr1-686 chr1 17527508 17527752 + 19.5 0.000 Intergenic Intergenic -12068 NR_137288 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr3-1481 chr3 183794361 183794605 + 19.5 0.000 TTS (NM_001351371) TTS (NM_001351371) 15968 NR_046727 100874113 NR_046727 YEATS2-AS1 - YEATS2 antisense RNA 1 ncRNA chr16-843 chr16 67537477 67537721 + 19.5 0.000 intron (NM_001193524, intron 1 of 21) CpG 137 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr22-386 chr22 30302155 30302399 + 19.5 0.000 intron (NM_031937, intron 2 of 8) intron (NM_031937, intron 2 of 8) -12650 NM_001037666 652968 Hs.444950 NM_001037666 ENSG00000239282 CASTOR1 GATSL3 cytosolic arginine sensor for mTORC1 subunit 1 protein-coding chr7-579 chr7 90346473 90346717 + 19.5 0.000 promoter-TSS (NM_033107) promoter-TSS (NM_033107) -121 NM_001042717 85865 Hs.593547 NM_033107 ENSG00000105793 GTPBP10 ObgH2|UG0751c10 GTP binding protein 10 protein-coding chr9-499 chr9 6080210 6080454 + 19.5 0.000 Intergenic Intergenic -64708 NM_001243202 26953 Hs.167496 NM_012416 ENSG00000137040 RANBP6 - RAN binding protein 6 protein-coding chr19-1132 chr19 661362 661606 + 19.5 0.000 intron (NM_194460, intron 1 of 8) intron (NM_194460, intron 1 of 8) 1730 NM_001366018 55658 Hs.69554 NM_017876 ENSG00000070423 RNF126 - ring finger protein 126 protein-coding chr9-968 chr9 125509637 125509881 + 19.5 0.000 intron (NM_001006619, intron 7 of 10) intron (NM_001006619, intron 7 of 10) 197449 NM_001006617 79109 Hs.495138 NM_024117 ENSG00000119487 MAPKAP1 JC310|MIP1|SIN1|SIN1b|SIN1g MAPK associated protein 1 protein-coding chr6-1069 chr6 129744642 129744886 + 19.5 0.000 Intergenic Intergenic -34587 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr19-1437 chr19 2103686 2103930 + 19.5 0.000 intron (NM_003938, intron 29 of 29) intron (NM_003938, intron 29 of 29) 6893 NM_001031735 113177 Hs.424049 NM_052878 ENSG00000099840 IZUMO4 C19orf36|IMAGE:4215339 IZUMO family member 4 protein-coding chr4-701 chr4 60683437 60683681 + 19.5 0.000 Intergenic Intergenic -239060 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr5-414 chr5 73120477 73120721 + 19.5 0.000 promoter-TSS (NM_001161342) promoter-TSS (NM_001161342) 24 NM_173490 134285 Hs.162246 NM_173490 ENSG00000157111 TMEM171 PRP2 transmembrane protein 171 protein-coding chr10-396 chr10 33252908 33253152 + 19.5 0.000 intron (NM_001244973, intron 6 of 16) intron (NM_001244973, intron 6 of 16) 81637 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr4-753 chr4 144266517 144266761 + 19.5 0.000 Intergenic Intergenic -125921 NM_001308187 2993 Hs.434973 NM_002099 ENSG00000170180 GYPA CD235a|GPA|GPErik|GPSAT|HGpMiV|HGpMiXI|HGpSta(C)|MN|MNS|PAS-2 glycophorin A (MNS blood group) protein-coding chr16-359 chr16 4602565 4602809 + 19.5 0.000 Intergenic Intergenic 12201 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr7-549 chr7 5596190 5596434 + 19.5 0.000 intron (NM_003088, intron 1 of 4) intron (NM_003088, intron 1 of 4) 3496 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr18-47 chr18 51030079 51030323 + 19.5 0.000 promoter-TSS (NM_005359) promoter-TSS (NM_005359) -12 NM_005359 4089 Hs.75862 NM_005359 ENSG00000141646 SMAD4 DPC4|JIP|MADH4|MYHRS SMAD family member 4 protein-coding chr1-2687 chr1 244965159 244965403 + 19.5 0.000 TTS (NR_111907) TTS (NR_111907) -4588 NM_032328 84288 Hs.134857 NM_032328 ENSG00000203666 EFCAB2 CFAP200|DRC8 EF-hand calcium binding domain 2 protein-coding chr5-582 chr5 57442271 57442515 + 19.5 0.000 Intergenic Intergenic 40418 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr3-216 chr3 13025207 13025451 + 19.5 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) -38228 NM_001330619 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr13-239 chr13 41546405 41546649 + 19.5 0.000 Intergenic MIRc|SINE|MIR 21868 NR_049803 100847026 NR_049803 ENSG00000284584 MIR5006 - microRNA 5006 ncRNA chr1-888 chr1 202184633 202184877 + 19.5 0.000 non-coding (NR_002930, exon 15 of 22) non-coding (NR_002930, exon 15 of 22) -9235 NM_001017403 59352 Hs.497402 NM_021636 ENSG00000133067 LGR6 GPCR|VTS20631 leucine rich repeat containing G protein-coupled receptor 6 protein-coding chr5-721 chr5 11139666 11139910 + 19.5 0.000 intron (NM_001288715, intron 11 of 20) MLT1D|LTR|ERVL-MaLR -378554 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr2-1245 chr2 60516643 60516887 + 19.5 0.000 intron (NM_138559, intron 2 of 4) Plat_L3|LINE|CR1 36733 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding chr4-321 chr4 55346436 55346680 + 19.5 0.000 intron (NM_024592, intron 1 of 4) CpG 316 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding chr4-1078 chr4 144701871 144702115 + 19.5 0.000 intron (NM_022475, intron 4 of 12) intron (NM_022475, intron 4 of 12) 55837 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding chr7-820 chr7 5608522 5608766 + 19.5 0.000 Intergenic Intergenic 15828 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr18-192 chr18 76519065 76519309 + 19.5 0.000 Intergenic Intergenic -9468 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr12-554 chr12 124739021 124739265 + 19.5 0.000 Intergenic CpG 100528 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr3-620 chr3 143971426 143971670 + 19.5 0.000 promoter-TSS (NM_173552) promoter-TSS (NM_173552) -250 NM_173552 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr15-537 chr15 98684450 98684694 + 19.5 0.000 intron (NM_000875, intron 1 of 20) intron (NM_000875, intron 1 of 20) -33351 NR_126453 104472848 Hs.349049 NR_126453 IRAIN IGF1R-AS IGF1R antisense imprinted non-protein coding RNA ncRNA chr12-987 chr12 94546243 94546487 + 19.5 0.000 Intergenic Intergenic -15424 NR_049885 100847031 NR_049885 ENSG00000266099 MIR5700 - microRNA 5700 ncRNA chr19-1392 chr19 49007388 49007632 + 19.5 0.000 intron (NM_006666, intron 6 of 14) intron (NM_006666, intron 6 of 14) -2396 NR_106856 102466738 NR_106856 ENSG00000273898 MIR6798 hsa-mir-6798 microRNA 6798 ncRNA chr21-98 chr21 32569463 32569707 + 19.5 0.000 intron (NR_146639, intron 10 of 11) CpG 15938 NM_144659 140290 Hs.728804 NM_018277 ENSG00000242220 TCP10L C21orf77|PRED77|TCP10A-1|TCP10A-2 t-complex 10 like protein-coding chr21-238 chr21 39386074 39386318 + 19.5 0.000 intron (NM_001350296, intron 1 of 4) intron (NM_001350296, intron 1 of 4) -1567 NM_001146218 7485 Hs.198308 NM_004627 ENSG00000182093 GET1 CHD5|WRB guided entry of tail-anchored proteins factor 1 protein-coding chr8-803 chr8 13854685 13854929 + 19.5 0.000 Intergenic Intergenic 225117 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr7-1422 chr7 135147477 135147721 + 19.5 0.000 promoter-TSS (NM_018295) promoter-TSS (NM_018295) -473 NM_018295 55281 Hs.521213 NM_018295 ENSG00000146859 TMEM140 - transmembrane protein 140 protein-coding chr11-1077 chr11 31921195 31921439 + 19.5 0.000 Intergenic Intergenic 94750 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA chr3-1007 chr3 123694589 123694833 + 19.5 0.000 intron (NM_001321309, intron 17 of 32) intron (NM_001321309, intron 17 of 32) 5067 NR_046629 100873940 Hs.667316 NR_046629 ENSG00000250174 MYLK-AS2 - MYLK antisense RNA 2 ncRNA chr2-1875 chr2 178195105 178195349 + 19.5 0.000 intron (NM_001201480, intron 1 of 25) CpG 715 NM_001201480 114880 Hs.318775 NM_032523 ENSG00000079156 OSBPL6 ORP6 oxysterol binding protein like 6 protein-coding chr14-186 chr14 70809676 70809920 + 19.5 0.000 promoter-TSS (NM_001284230) promoter-TSS (NM_001284230) -285 NM_033141 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding chr19-1307 chr19 580418 580662 + 19.5 0.000 intron (NM_198589, intron 3 of 7) intron (NM_198589, intron 3 of 7) 7944 NM_001322243 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr1-756 chr1 27538853 27539097 + 19.5 0.000 intron (NM_001029882, intron 6 of 6) intron (NM_001029882, intron 6 of 6) -48808 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr1-1401 chr1 155513727 155513971 + 19.5 0.000 intron (NM_018489, intron 2 of 27) intron (NM_018489, intron 2 of 27) -48193 NR_147964 645676 Hs.568693 NR_027023 ENSG00000235919 ASH1L-AS1 - ASH1L antisense RNA 1 ncRNA chr11-803 chr11 66607355 66607599 + 19.5 0.000 Intergenic Intergenic -9105 NM_001198845 100526737 Hs.523822 NM_001198845 ENSG00000248643 RBM14-RBM4 COAZ|PSP2|RBM14|SIP RBM14-RBM4 readthrough protein-coding chr9-454 chr9 135717010 135717254 + 19.5 0.000 intron (NM_020822, intron 2 of 30) intron (NM_020822, intron 2 of 30) 14947 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr16-256 chr16 29926067 29926311 + 19.5 0.000 promoter-TSS (NR_110933) promoter-TSS (NR_110933) 37 NM_178863 253980 Hs.534590 NM_178863 ENSG00000174943 KCTD13 BACURD1|FKSG86|PDIP1|POLDIP1|hBACURD1 potassium channel tetramerization domain containing 13 protein-coding chr20-656 chr20 62703640 62703884 + 19.5 0.000 Intergenic Intergenic -5074 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr19-932 chr19 6164246 6164490 + 19.5 0.000 intron (NM_030924, intron 6 of 14) intron (NM_030924, intron 6 of 14) 28701 NM_001289179 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr7-829 chr7 32093501 32093745 + 19.5 0.000 intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -22187 NM_001322055 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr5-1039 chr5 57435755 57435999 + 19.5 0.000 Intergenic Intergenic 46934 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding chr16-372 chr16 83807912 83808156 + 19.5 0.000 promoter-TSS (NM_001537) promoter-TSS (NM_001537) 56 NM_001537 3281 Hs.250899 NM_001537 ENSG00000230989 HSBP1 NPC-A-13 heat shock factor binding protein 1 protein-coding chr2-906 chr2 26818553 26818797 + 19.5 0.000 Intergenic Intergenic -29457 NM_020134 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr14-268 chr14 70907452 70907696 + 19.5 0.000 5' UTR (NM_001308160, exon 1 of 34) 5' UTR (NM_001308160, exon 1 of 34) 115 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr2-791 chr2 195531833 195532077 + 19.5 0.000 Intergenic Intergenic -125003 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr8-589 chr8 143407372 143407616 + 19.5 0.000 Intergenic CpG -10185 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr3-1073 chr3 187567748 187567992 + 19.5 0.000 Intergenic MIRc|SINE|MIR 102524 NM_001048 6750 Hs.12409 NM_001048 ENSG00000157005 SST SMST somatostatin protein-coding chr16-497 chr16 88558615 88558859 + 19.5 0.000 Intergenic Intergenic 3246 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr14-514 chr14 38042427 38042671 + 19.5 0.000 Intergenic Intergenic -140425 NR_135286 400208 Hs.660501 NR_135286 ENSG00000259091 LINC00517 C14orf26 long intergenic non-protein coding RNA 517 ncRNA chr3-1450 chr3 157794844 157795088 + 19.5 0.000 Intergenic Intergenic 251622 NM_001243729 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding chr12-1256 chr12 122894329 122894573 + 19.5 0.000 intron (NM_024667, intron 1 of 3) intron (NM_024667, intron 1 of 3) 1673 NM_024667 79720 Hs.507162 NM_024667 ENSG00000139722 VPS37B - VPS37B subunit of ESCRT-I protein-coding chr6-836 chr6 105676029 105676273 + 19.5 0.000 Intergenic Intergenic -273069 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr7-1254 chr7 31160823 31161067 + 19.4 0.000 Intergenic Intergenic 108484 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding chr12-897 chr12 115710092 115710336 + 19.4 0.000 Intergenic Intergenic 438440 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr1-744 chr1 2267812 2268056 + 19.4 0.000 intron (NM_003036, intron 1 of 6) intron (NM_003036, intron 1 of 6) 39615 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr16-1248 chr16 89949473 89949717 + 19.4 0.000 exon (NM_207514, exon 2 of 13) exon (NM_207514, exon 2 of 13) 175 NM_001242819 54849 Hs.62771 NM_017702 ENSG00000140995 DEF8 - differentially expressed in FDCP 8 homolog protein-coding chr15-272 chr15 34988640 34988884 + 19.4 0.000 promoter-TSS (NM_014106) promoter-TSS (NM_014106) -475 NM_014106 54989 Hs.744990 NM_014106 ENSG00000198146 ZNF770 PRO1914 zinc finger protein 770 protein-coding chr14-680 chr14 23154084 23154328 + 19.4 0.000 intron (NM_012244, intron 3 of 10) intron (NM_012244, intron 3 of 10) 187 NM_182728 23428 Hs.596643 NM_012244 ENSG00000092068 SLC7A8 LAT2|LPI-PC1 solute carrier family 7 member 8 protein-coding chr7-1126 chr7 84913581 84913825 + 19.4 0.000 Intergenic Intergenic 208228 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr4-506 chr4 8260823 8261067 + 19.4 0.000 Intergenic Intergenic -8809 NM_001297559 94031 Hs.479119 NM_053044 ENSG00000170801 HTRA3 Prsp|Tasp HtrA serine peptidase 3 protein-coding chr3-1252 chr3 42149097 42149341 + 19.4 0.000 promoter-TSS (NM_001265610) promoter-TSS (NM_001265610) -16 NM_001349249 22906 Hs.535711 NM_014965 ENSG00000182606 TRAK1 EIEE68|MILT1|OIP106 trafficking kinesin protein 1 protein-coding chr19-1181 chr19 7534684 7534928 + 19.4 0.000 promoter-TSS (NM_001166113) promoter-TSS (NM_001166113) 56 NM_001166113 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr5-850 chr5 177385863 177386107 + 19.4 0.000 intron (NM_003052, intron 2 of 12) intron (NM_003052, intron 2 of 12) 1551 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr1-1363 chr1 86157147 86157391 + 19.4 0.000 promoter-TSS (NR_146343) promoter-TSS (NR_146343) -285 NR_146340 255631 Hs.659516 NM_152890 ENSG00000171502 COL24A1 - collagen type XXIV alpha 1 chain protein-coding chr2-729 chr2 20617939 20618183 + 19.4 0.000 3' UTR (NM_022460, exon 7 of 7) 3' UTR (NM_022460, exon 7 of 7) -25513 NR_046836 100874343 Hs.591546 NR_046836 ENSG00000231948 HS1BP3-IT1 - HS1BP3 intronic transcript 1 ncRNA chr9-1137 chr9 134147258 134147502 + 19.4 0.000 intron (NM_052821, intron 6 of 12) MER5A|DNA|hAT-Charlie 7588 NM_052821 11091 Hs.397638 NM_017588 ENSG00000196363 WDR5 BIG-3|CFAP89|SWD3 WD repeat domain 5 protein-coding chr5-634 chr5 157917917 157918161 + 19.4 0.000 Intergenic LTR8|LTR|ERV1 -58894 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding chr6-1052 chr6 113901677 113901921 + 19.4 0.000 Intergenic Intergenic -2588 NR_027060 285759 Hs.376634 NM_173673 ENSG00000175967 FLJ34503 - uncharacterized FLJ34503 ncRNA chr10-698 chr10 130021302 130021546 + 19.4 0.000 Intergenic Intergenic -57150 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr19-1081 chr19 18764454 18764698 + 19.4 0.000 intron (NM_015321, intron 8 of 13) intron (NM_015321, intron 8 of 13) 26729 NM_000095 1311 Hs.1584 NM_000095 ENSG00000105664 COMP EDM1|EPD1|MED|PSACH|THBS5|TSP5 cartilage oligomeric matrix protein protein-coding chr17-1221 chr17 4161263 4161507 + 19.4 0.000 Intergenic Intergenic 17688 NM_001254755 124936 Hs.513871 NM_144611 ENSG00000167740 CYB5D2 - cytochrome b5 domain containing 2 protein-coding chr8-165 chr8 123157819 123158063 + 19.4 0.000 intron (NM_001363151, intron 19 of 19) intron (NM_001363151, intron 19 of 19) -21106 NM_207006 84985 Hs.379821 NM_032899 ENSG00000147689 FAM83A BJ-TSA-9 family with sequence similarity 83 member A protein-coding chr14-578 chr14 92473537 92473781 + 19.4 0.000 intron (NM_153647, intron 13 of 17) intron (NM_153647, intron 13 of 17) -40122 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr19-1222 chr19 19487841 19488085 + 19.4 0.000 intron (NM_001359631, intron 2 of 10) intron (NM_001359631, intron 2 of 10) 27585 NM_032037 83983 Hs.532711 NM_032037 ENSG00000178093 TSSK6 CT72|FKSG82|SSTK|TSSK4 testis specific serine kinase 6 protein-coding chr1-1662 chr1 16017313 16017557 + 19.4 0.000 intron (NM_001349689, intron 1 of 2) intron (NM_001349689, intron 1 of 2) 1355 NM_001349688 27129 Hs.502612 NM_014424 ENSG00000173641 HSPB7 cvHSP heat shock protein family B (small) member 7 protein-coding chr12-1075 chr12 28390967 28391211 + 19.4 0.000 intron (NM_001330367, intron 7 of 11) intron (NM_001330367, intron 7 of 11) -200351 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA chr20-345 chr20 50826074 50826318 + 19.4 0.000 intron (NM_017843, intron 2 of 5) intron (NM_017843, intron 2 of 5) 31302 NM_198799 55653 Hs.381178 NM_017843 ENSG00000124243 BCAS4 CNOL breast carcinoma amplified sequence 4 protein-coding chr14-364 chr14 55333843 55334087 + 19.4 0.000 intron (NM_152231, intron 1 of 1) intron (NM_152231, intron 1 of 1) 61811 NM_152231 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr9-786 chr9 89138904 89139148 + 19.4 0.000 intron (NM_016848, intron 1 of 11) MER41-int|LTR|ERV1 39792 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding chr2-1820 chr2 128623969 128624213 + 19.4 0.000 Intergenic Intergenic -240509 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA chr19-866 chr19 12806362 12806606 + 19.4 0.000 promoter-TSS (NM_006397) promoter-TSS (NM_006397) -130 NM_006397 10535 Hs.532851 NM_006397 ENSG00000104889 RNASEH2A AGS4|JUNB|RNASEHI|RNHIA|RNHL|THSD8 ribonuclease H2 subunit A protein-coding chr7-712 chr7 32881143 32881387 + 19.4 0.000 intron (NM_015483, intron 1 of 3) intron (NM_015483, intron 1 of 3) 10495 NM_015483 25948 Hs.372541 NM_015483 ENSG00000170852 KBTBD2 BKLHD1 kelch repeat and BTB domain containing 2 protein-coding chr9-181 chr9 137605143 137605387 + 19.4 0.000 promoter-TSS (NM_152285) promoter-TSS (NM_152285) -375 NM_001317968 92714 Hs.12999 NM_152285 ENSG00000197070 ARRDC1 - arrestin domain containing 1 protein-coding chr19-1614 chr19 42296154 42296398 + 19.4 0.000 TTS (NM_015125) TTS (NM_015125) -5856 NM_199285 284338 Hs.585901 NM_199285 ENSG00000188368 PRR19 - proline rich 19 protein-coding chr9-683 chr9 117495019 117495263 + 19.4 0.000 Intergenic L1M4c|LINE|L1 -80084 NM_001365068 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chrX-419 chrX 12546391 12546635 + 19.4 0.000 intron (NM_001368400, intron 1 of 15) intron (NM_001368400, intron 1 of 15) 47833 NM_001368400 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr2-479 chr2 240560283 240560527 + 19.4 0.000 5' UTR (NM_001370465, exon 1 of 2) 5' UTR (NM_001370465, exon 1 of 2) 351 NM_001033575 285193 Hs.369297 NM_001033575 ENSG00000188542 DUSP28 DUSP26|VHP dual specificity phosphatase 28 protein-coding chr8-156 chr8 38030777 38031021 + 19.4 0.000 intron (NM_004095, intron 1 of 2) CpG 365 NM_004095 1978 Hs.411641 NM_004095 ENSG00000187840 EIF4EBP1 4E-BP1|4EBP1|BP-1|PHAS-I eukaryotic translation initiation factor 4E binding protein 1 protein-coding chr4-1023 chr4 93402089 93402333 + 19.4 0.000 intron (NM_001286838, intron 8 of 14) MIRc|SINE|MIR -426542 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr19-1330 chr19 4517160 4517404 + 19.4 0.000 intron (NM_001367868, intron 3 of 7) intron (NM_001367868, intron 3 of 7) 1204 NM_001367868 729359 Hs.591387 NM_001080400 ENSG00000167676 PLIN4 KIAA1881|S3-12 perilipin 4 protein-coding chr20-267 chr20 35738149 35738393 + 19.4 0.000 intron (NR_136587, intron 4 of 4) AluSx3|SINE|Alu 3989 NM_004902 9584 Hs.282901 NM_004902 ENSG00000131051 RBM39 CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 RNA binding motif protein 39 protein-coding chr19-678 chr19 13781720 13781964 + 19.4 0.000 Intergenic Intergenic 7386 NM_014047 28974 Hs.231616 NM_014047 ENSG00000104979 C19orf53 HSPC023|LYDG10 chromosome 19 open reading frame 53 protein-coding chrX-160 chrX 54808691 54808935 + 19.4 0.000 promoter-TSS (NM_201222) promoter-TSS (NM_201222) -268 NM_201222 10916 Hs.522665 NM_014599 ENSG00000102316 MAGED2 11B6|BARTS5|BCG-1|BCG1|HCA10|MAGE-D2 MAGE family member D2 protein-coding chr14-804 chr14 103738456 103738700 + 19.4 0.000 intron (NM_015316, intron 14 of 16) intron (NM_015316, intron 14 of 16) 22834 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr9-904 chr9 85002723 85002967 + 19.4 0.000 intron (NM_001018064, intron 16 of 17) intron (NM_001018064, intron 16 of 17) 296944 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr7-1024 chr7 130886587 130886831 + 19.4 0.000 intron (NR_110472, intron 2 of 3) intron (NR_110472, intron 2 of 3) -9170 NR_029517 407024 NR_029517 ENSG00000283797 MIR29B1 MIRN29B1|miR-29b|miRNA29B1|mir-29b-1 microRNA 29b-1 ncRNA chr5-1150 chr5 150034785 150035029 + 19.4 0.000 intron (NM_014983, intron 11 of 19) L3|LINE|CR1 34168 NM_001366501 22993 Hs.719189 NM_014983 ENSG00000113716 HMGXB3 HMGX3|SMF HMG-box containing 3 protein-coding chr16-984 chr16 88403422 88403666 + 19.4 0.000 Intergenic Intergenic -23927 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr6-796 chr6 39882890 39883134 + 19.4 0.000 intron (NM_015345, intron 14 of 24) intron (NM_015345, intron 14 of 24) 14368 NR_125831 100505635 Hs.668513 NR_125831 ENSG00000235033 LOC100505635 - uncharacterized LOC100505635 ncRNA chr19-1306 chr19 548964 549208 + 19.4 0.000 exon (NM_005317, exon 4 of 5) exon (NM_005317, exon 4 of 5) 5033 NM_001258351 3004 Hs.465511 NM_005317 ENSG00000197540 GZMM LMET1|MET1 granzyme M protein-coding chrX-296 chrX 49155750 49155994 + 19.4 0.000 Intergenic Intergenic -6971 NM_024859 79917 Hs.193170 NM_024859 ENSG00000269313 MAGIX JM10|PDZX MAGI family member, X-linked protein-coding chr9-1252 chr9 94703766 94704010 + 19.4 0.000 Intergenic MER87B|LTR|ERV1 -22781 NM_032823 84909 Hs.434253 NM_032823 ENSG00000148120 AOPEP AP-O|APO|C90RF3|C9orf3|ONPEP aminopeptidase O (putative) protein-coding chr5-1044 chr5 61051538 61051782 + 19.4 0.000 intron (NM_174889, intron 1 of 3) intron (NM_174889, intron 1 of 3) 106455 NM_174889 91942 Hs.591757 NM_174889 ENSG00000164182 NDUFAF2 B17.2L|MC1DN10|MMTN|NDUFA12L|mimitin NADH:ubiquinone oxidoreductase complex assembly factor 2 protein-coding chr9-322 chr9 136717171 136717415 + 19.4 0.000 intron (NM_152421, intron 1 of 4) intron (NM_152421, intron 1 of 4) 4721 NM_152421 138311 Hs.741305 NM_152421 ENSG00000165716 DIPK1B C9orf136|FAM69B|pp6977 divergent protein kinase domain 1B protein-coding chr17-340 chr17 40140107 40140351 + 19.4 0.000 promoter-TSS (NM_007359) promoter-TSS (NM_007359) -308 NM_007359 22794 Hs.743287 NM_007359 ENSG00000108349 CASC3 BTZ|MLN51 CASC3 exon junction complex subunit protein-coding chr14-659 chr14 90543918 90544162 + 19.4 0.000 intron (NM_001320421, intron 20 of 20) intron (NM_001320421, intron 20 of 20) -26831 NR_135274 105370619 Hs.525530 NR_135274 LOC105370619 - uncharacterized LOC105370619 ncRNA chr2-1033 chr2 219557427 219557671 + 19.4 0.000 exon (NM_015311, exon 12 of 21) exon (NM_015311, exon 12 of 21) -8402 NR_036082 100423039 NR_036082 ENSG00000265252 MIR3132 - microRNA 3132 ncRNA chr15-177 chr15 63121799 63122043 + 19.4 0.000 promoter-TSS (NM_001288585) promoter-TSS (NM_001288585) 60 NM_032857 114294 Hs.410388 NM_032857 ENSG00000103642 LACTB G24|MRPL56 lactamase beta protein-coding chr8-894 chr8 73458732 73458976 + 19.4 0.000 intron (NM_001164383, intron 8 of 9) intron (NM_001164383, intron 8 of 9) 38780 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA chr9-1201 chr9 37614317 37614561 + 19.4 0.000 intron (NM_001371225, intron 1 of 15) intron (NM_001371225, intron 1 of 15) 11210 NM_001371225 chr6-807 chr6 44116253 44116497 + 19.4 0.000 intron (NM_001318771, intron 1 of 1) intron (NM_001318771, intron 1 of 1) 9892 NM_001318770 64928 Hs.311190 NM_032111 ENSG00000180992 MRPL14 L14mt|L32mt|MRP-L14|MRP-L32|MRPL32|RMPL32|RPML32 mitochondrial ribosomal protein L14 protein-coding chr18-316 chr18 23683799 23684043 + 19.4 0.000 Intergenic Intergenic -5532 NM_001302996 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr11-765 chr11 108664819 108665063 + 19.4 0.000 promoter-TSS (NM_004398) promoter-TSS (NM_004398) -128 NM_004398 1662 Hs.591931 NM_004398 ENSG00000178105 DDX10 Dbp4|HRH-J8 DEAD-box helicase 10 protein-coding chr9-1088 chr9 95055939 95056183 + 19.4 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -9289 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr6-994 chr6 50087242 50087486 + 19.4 0.000 Intergenic Intergenic -37435 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding chr10-761 chr10 124254593 124254837 + 19.4 0.000 Intergenic Intergenic -161117 NM_001270765 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr9-775 chr9 34046864 34047108 + 19.4 0.000 intron (NM_001370059, intron 1 of 28) intron (NM_001370059, intron 1 of 28) 1901 NM_001370068 55833 Hs.493739 NM_018449 ENSG00000137073 UBAP2 UBAP-2 ubiquitin associated protein 2 protein-coding chr14-702 chr14 52052484 52052728 + 19.4 0.000 intron (NM_007361, intron 5 of 21) intron (NM_007361, intron 5 of 21) 16453 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr2-628 chr2 131658031 131658275 + 19.4 0.000 Intergenic CpG 21128 NR_108087 101927994 Hs.635757 NR_108087 ENSG00000224559 LINC01087 - long intergenic non-protein coding RNA 1087 ncRNA chr2-1536 chr2 188181023 188181267 + 19.4 0.000 intron (NR_126396, intron 1 of 2) LTR43B|LTR|ERV1 106546 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr1-1134 chr1 14952580 14952824 + 19.4 0.000 intron (NM_001017999, intron 1 of 7) intron (NM_001017999, intron 1 of 7) 6783 NM_001017999 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr17-1163 chr17 63959208 63959452 + 19.4 0.000 exon (NM_000334, exon 12 of 24) exon (NM_000334, exon 12 of 24) 13588 NM_000334 6329 Hs.46038 NM_000334 ENSG00000007314 SCN4A CMS16|HOKPP2|HYKPP|HYPP|NAC1A|Na(V)1.4|Nav1.4|SkM1 sodium voltage-gated channel alpha subunit 4 protein-coding chr1-2378 chr1 47879159 47879403 + 19.4 0.000 intron (NM_001194986, intron 2 of 6) Tigger3a|DNA|TcMar-Tigger 118104 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr21-202 chr21 26952612 26952856 + 19.4 0.000 intron (NM_007038, intron 2 of 7) intron (NM_007038, intron 2 of 7) -1227 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA chr5-518 chr5 181223096 181223340 + 19.4 0.000 promoter-TSS (NR_045218) promoter-TSS (NR_045218) -63 NR_045218 90933 Hs.441488 NM_033549 ENSG00000146063 TRIM41 RINCK tripartite motif containing 41 protein-coding chr13-491 chr13 75764341 75764585 + 19.4 0.000 intron (NM_005358, intron 5 of 29) intron (NM_005358, intron 5 of 29) 3802 NM_015842 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr7-824 chr7 11297875 11298119 + 19.4 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR 324125 NR_033436 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr17-651 chr17 75109844 75110088 + 19.4 0.000 promoter-TSS (NM_001304272) promoter-TSS (NM_001304272) -3 NM_001304273 79637 Hs.413047 NM_024585 ENSG00000125449 ARMC7 - armadillo repeat containing 7 protein-coding chr19-1028 chr19 58059285 58059529 + 19.4 0.000 intron (NM_007134, intron 1 of 3) CpG 125 NM_003436 7694 Hs.85863 NM_003436 ENSG00000176293 ZNF135 ZNF61|ZNF78L1|pHZ-17|pT3 zinc finger protein 135 protein-coding chr14-321 chr14 67488684 67488928 + 19.4 0.000 promoter-TSS (NM_001348541) promoter-TSS (NM_001348541) -85 NM_001348542 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding chr19-756 chr19 42121752 42121996 + 19.4 0.000 intron (NM_001207026, intron 4 of 12) intron (NM_001207026, intron 4 of 12) 10572 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr6-673 chr6 36127533 36127777 + 19.4 0.000 Intergenic Intergenic -2858 NR_072996 5603 Hs.178695 NM_002754 ENSG00000156711 MAPK13 MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta mitogen-activated protein kinase 13 protein-coding chr5-446 chr5 15500005 15500249 + 19.4 0.000 promoter-TSS (NM_012304) promoter-TSS (NM_012304) -53 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding chr6-1088 chr6 150071042 150071286 + 19.4 0.000 Intergenic Intergenic -2043 NM_024518 79465 Hs.15422 NM_024518 ENSG00000131019 ULBP3 N2DL-3|NKG2DL3|RAET1N UL16 binding protein 3 protein-coding chr20-211 chr20 44311206 44311450 + 19.4 0.000 promoter-TSS (NM_001080472) promoter-TSS (NM_001080472) -126 NM_001080472 128486 Hs.632269 NM_001080472 ENSG00000197296 FITM2 C20orf142|Fit2|dJ881L22.2 fat storage inducing transmembrane protein 2 protein-coding chr17-1165 chr17 66952300 66952544 + 19.4 0.000 Intergenic Intergenic -12285 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr20-470 chr20 4143812 4144056 + 19.4 0.000 Intergenic MER39|LTR|ERV1 -4845 NM_001270691 54498 Hs.433337 NM_175839 ENSG00000088826 SMOX C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO spermine oxidase protein-coding chr11-1288 chr11 47434604 47434848 + 19.4 0.000 Intergenic L1MC4|LINE|L1 -8253 NM_002804 5702 Hs.250758 NM_002804 ENSG00000165916 PSMC3 TBP1 proteasome 26S subunit, ATPase 3 protein-coding chr21-272 chr21 46136944 46137188 + 19.4 0.000 exon (NM_206965, exon 14 of 14) exon (NM_206965, exon 14 of 14) -14309 NM_001350598 100861507 Hs.570448 NM_001350598 FTCD-AS1 - FTCD antisense RNA 1 protein-coding chr16-983 chr16 88025016 88025260 + 19.4 0.000 intron (NM_001173539, intron 7 of 12) intron (NM_001173539, intron 7 of 12) 55120 NM_001173543 54971 Hs.461705 NM_017869 ENSG00000172530 BANP BEND1|SMAR1|SMARBP1 BTG3 associated nuclear protein protein-coding chr2-890 chr2 10057437 10057681 + 19.4 0.000 3' UTR (NM_001037160, exon 3 of 3) 3' UTR (NM_001037160, exon 3 of 3) 13314 NM_001177718 8462 Hs.12229 NM_003597 ENSG00000172059 KLF11 FKLF|FKLF1|MODY7|TIEG2|Tieg3 Kruppel like factor 11 protein-coding chr10-880 chr10 88157995 88158239 + 19.4 0.000 Intergenic Intergenic 294492 NM_001304717 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding chr3-1190 chr3 188901603 188901847 + 19.4 0.000 Intergenic Intergenic 45914 NR_046873 100874043 Hs.616287 NR_046873 ENSG00000234076 TPRG1-AS1 - TPRG1 antisense RNA 1 ncRNA chr5-409 chr5 219082 219326 + 19.4 0.000 intron (NM_001294332, intron 1 of 13) intron (NM_001294332, intron 1 of 13) 884 NM_004168 6389 Hs.440475 NM_004168 ENSG00000073578 SDHA CMD1GG|FP|PGL5|SDH1|SDH2|SDHF succinate dehydrogenase complex flavoprotein subunit A protein-coding chr2-1444 chr2 23588093 23588337 + 19.4 0.000 intron (NM_052920, intron 3 of 13) intron (NM_052920, intron 3 of 13) 203036 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr19-1572 chr19 31548974 31549218 + 19.4 0.000 Intergenic Intergenic -39093 NM_001278577 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr5-426 chr5 136249671 136249915 + 19.4 0.000 intron (NM_020389, intron 6 of 11) intron (NM_020389, intron 6 of 11) 23138 NR_133682 106478968 Hs.637713 NR_133682 ENSG00000250947 TRPC7-AS2 CTB-28J9.2 TRPC7 antisense RNA 2 ncRNA chr11-1546 chr11 66369693 66369937 + 19.4 0.000 intron (NM_001532, intron 2 of 11) intron (NM_001532, intron 2 of 11) 1945 NM_001532 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr6-877 chr6 166598415 166598659 + 19.4 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 28714 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr12-581 chr12 57893906 57894150 + 19.4 0.000 non-coding (NR_148947, exon 1 of 4) non-coding (NR_148947, exon 1 of 4) 2454 NR_148947 283387 Hs.727244 NR_148947 ENSG00000245651 LOC283387 - uncharacterized LOC283387 ncRNA chr11-381 chr11 1450460 1450704 + 19.4 0.000 intron (NM_003957, intron 13 of 19) intron (NM_003957, intron 13 of 19) 30304 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr1-2272 chr1 19452397 19452641 + 19.4 0.000 intron (NM_001206541, intron 1 of 8) intron (NM_001206541, intron 1 of 8) 31776 NM_001282162 832 Hs.432760 NM_004930 ENSG00000077549 CAPZB CAPB|CAPPB|CAPZ capping actin protein of muscle Z-line subunit beta protein-coding KI270442.1-1 KI270442.1 391591 391835 + 19.4 0.000 NA NA NA NA chr5-433 chr5 151481566 151481810 + 19.4 0.000 intron (NM_001349740, intron 11 of 11) intron (NM_001349740, intron 11 of 11) 34085 NM_001349740 206358 Hs.269004 NM_078483 ENSG00000123643 SLC36A1 Dct1|LYAAT1|PAT1|TRAMD3 solute carrier family 36 member 1 protein-coding chr6-1108 chr6 154758338 154758582 + 19.4 0.000 intron (NM_001286189, intron 3 of 21) L1MEf|LINE|L1 25082 NM_001286199 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr12-967 chr12 54859634 54859878 + 19.4 0.000 Intergenic Intergenic 5240 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding chr11-723 chr11 45907711 45907955 + 19.4 0.000 promoter-TSS (NM_001080446) promoter-TSS (NM_001080446) -562 NM_001080446 143678 NM_001080446 ENSG00000234776 C11orf94 - chromosome 11 open reading frame 94 protein-coding chr10-1263 chr10 102673976 102674220 + 19.4 0.000 3' UTR (NM_004311, exon 6 of 6) 3' UTR (NM_004311, exon 6 of 6) 29603 NM_030912 81603 Hs.336810 NM_030912 ENSG00000171206 TRIM8 GERP|RNF27 tripartite motif containing 8 protein-coding chr10-380 chr10 124092630 124092874 + 19.4 0.000 promoter-TSS (NM_015892) promoter-TSS (NM_015892) -346 NM_015892 51363 Hs.287537 NM_014863 ENSG00000182022 CHST15 BRAG|GALNAC4S-6ST carbohydrate sulfotransferase 15 protein-coding chr2-1181 chr2 1742959 1743203 + 19.4 0.000 intron (NM_012293, intron 1 of 22) CpG 1434 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr2-1521 chr2 158498483 158498727 + 19.4 0.000 intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 41653 NM_001304969 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding chr10-935 chr10 123913801 123914045 + 19.4 0.000 Intergenic Intergenic -22116 NM_198148 119587 Hs.656887 NM_198148 ENSG00000121898 CPXM2 CPX2|UNQ676 carboxypeptidase X, M14 family member 2 protein-coding chr16-447 chr16 85523345 85523589 + 19.4 0.000 Intergenic Intergenic -87942 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr1-2330 chr1 32989223 32989467 + 19.4 0.000 Intergenic L3b|LINE|CR1 -24536 NM_153341 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr6-748 chr6 152636793 152637037 + 19.4 0.000 promoter-TSS (NM_033071) promoter-TSS (NM_033071) -64 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr11-682 chr11 117144048 117144292 + 19.4 0.000 promoter-TSS (NR_110268) promoter-TSS (NR_110268) -114 NM_001184748 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr6-1101 chr6 154232964 154233208 + 19.4 0.000 intron (NM_015553, intron 5 of 11) AluSz|SINE|Alu 96995 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding KI270591.1-1 KI270591.1 4962 5206 + 19.4 0.000 NA NA NA NA chr5-592 chr5 80141779 80142023 + 19.4 0.000 3' UTR (NM_001174072, exon 12 of 12) 3' UTR (NM_001174072, exon 12 of 12) -58236 NR_109930 101929215 NR_109930 ENSG00000249825 CTD-2201I18.1 - uncharacterized LOC101929215 ncRNA chr11-1340 chr11 89495954 89496198 + 19.4 0.000 intron (NM_001143837, intron 3 of 20) intron (NM_001143837, intron 3 of 20) -3857 NM_001300995 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding chr7-1073 chr7 4695130 4695374 + 19.4 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 12957 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr12-1180 chr12 93591474 93591718 + 19.4 0.000 Intergenic Intergenic 18921 NM_001270471 8835 Hs.485572 NM_003877 ENSG00000120833 SOCS2 CIS2|Cish2|SOCS-2|SSI-2|SSI2|STATI2 suppressor of cytokine signaling 2 protein-coding chr10-512 chr10 71468500 71468744 + 19.4 0.000 intron (NM_052836, intron 3 of 12) intron (NM_052836, intron 3 of 12) 43298 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr9-989 chr9 131178349 131178593 + 19.4 0.000 intron (NM_001318324, intron 24 of 35) intron (NM_001318324, intron 24 of 35) -11668 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr13-483 chr13 64272837 64273081 + 19.4 0.000 Intergenic L1MCa|LINE|L1 -196948 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA chr1-2153 chr1 1067770 1068014 + 19.4 0.000 Intergenic CpG 6414 NM_001205252 401934 Hs.568137 NM_001205252 ENSG00000237330 RNF223 - ring finger protein 223 protein-coding chr13-226 chr13 21060578 21060822 + 19.4 0.000 intron (NM_014572, intron 1 of 7) CpG 886 NM_014572 26524 Hs.78960 NM_014572 ENSG00000150457 LATS2 KPM large tumor suppressor kinase 2 protein-coding chr11-634 chr11 108121849 108122093 + 19.4 0.000 intron (NM_000019, intron 1 of 11) CpG 404 NM_000019 38 Hs.232375 NM_000019 ENSG00000075239 ACAT1 ACAT|MAT|T2|THIL acetyl-CoA acetyltransferase 1 protein-coding chr1-2111 chr1 206693127 206693371 + 19.4 0.000 intron (NM_004759, intron 1 of 9) intron (NM_004759, intron 1 of 9) 8344 NM_032960 9261 Hs.643566 NM_004759 ENSG00000162889 MAPKAPK2 MAPKAP-K2|MK-2|MK2 MAPK activated protein kinase 2 protein-coding chr3-532 chr3 75785264 75785508 + 19.4 0.000 promoter-TSS (NM_001324027) promoter-TSS (NM_001324027) 163 NM_001290209 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding chr12-1265 chr12 124437160 124437404 + 19.4 0.000 intron (NM_001077261, intron 10 of 47) intron (NM_001077261, intron 10 of 47) -100040 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr19-775 chr19 2032509 2032753 + 19.4 0.000 Intergenic Intergenic -16917 NM_017797 55643 Hs.465543 NM_017797 ENSG00000133243 BTBD2 - BTB domain containing 2 protein-coding chr1-1561 chr1 162021678 162021922 + 19.4 0.000 intron (NM_001347700, intron 1 of 7) intron (NM_001347700, intron 1 of 7) 2665 NM_001347700 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding chr2-1057 chr2 240837349 240837593 + 19.4 0.000 Intergenic Intergenic -17163 NM_001244008 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr22-721 chr22 44761672 44761916 + 19.4 0.000 intron (NM_181335, intron 1 of 11) THE1B|LTR|ERVL-MaLR 9236 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr6-762 chr6 161394136 161394380 + 19.4 0.000 intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) -76719 NR_134595 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr11-947 chr11 108483279 108483523 + 19.4 0.000 intron (NM_001363503, intron 3 of 6) L2b|LINE|L2 14983 NM_001363503 143888 Hs.83286 NM_153705 ENSG00000178202 POGLUT3 KDELC2 protein O-glucosyltransferase 3 protein-coding chr2-1770 chr2 96947914 96948158 + 19.4 0.000 intron (NM_001122646, intron 7 of 16) MIRc|SINE|MIR 28930 NR_110209 101927053 Hs.677537 NR_110209 LOC101927053 - uncharacterized LOC101927053 ncRNA chr1-835 chr1 46203598 46203842 + 19.4 0.000 intron (NM_001013615, intron 1 of 1) intron (NM_001013615, intron 1 of 1) 386 NM_001013615 541468 Hs.568642 NM_001013615 ENSG00000171357 LURAP1 C1orf190|LRAP35a|LRP35A leucine rich adaptor protein 1 protein-coding chr9-528 chr9 96777776 96778020 + 19.4 0.000 5' UTR (NM_001314059, exon 1 of 6) 5' UTR (NM_001314059, exon 1 of 6) 189 NM_001314060 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding chr8-390 chr8 42207310 42207554 + 19.4 0.000 intron (NM_001319189, intron 1 of 11) intron (NM_001319189, intron 1 of 11) 133 NM_000930 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr22-211 chr22 38731786 38732030 + 19.4 0.000 3' UTR (NM_004286, exon 12 of 12) 3' UTR (NM_004286, exon 12 of 12) 23558 NM_001199580 25777 Hs.517622 NM_015374 ENSG00000100242 SUN2 UNC84B Sad1 and UNC84 domain containing 2 protein-coding chr18-214 chr18 7566581 7566825 + 19.4 0.000 promoter-TSS (NM_001105244) promoter-TSS (NM_001105244) -613 NM_002845 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding chr17-1236 chr17 8126727 8126971 + 19.4 0.000 Intergenic Intergenic -2743 NM_001165967 84667 Hs.434828 NM_032580 ENSG00000179111 HES7 SCDO4|bHLHb37 hes family bHLH transcription factor 7 protein-coding chr1-2096 chr1 177516285 177516529 + 19.2 0.000 Intergenic Intergenic 164821 NR_126001 102724661 Hs.146628 NR_126001 LINC01645 - long intergenic non-protein coding RNA 1645 ncRNA KI270736.1-4 KI270736.1 173057 173301 + 19.2 0.000 NA NA NA NA chr15-743 chr15 90988334 90988578 + 19.2 0.000 non-coding (NR_051984, exon 4 of 4) non-coding (NR_051984, exon 4 of 4) 6079 NM_001267580 9055 Hs.366401 NM_003981 ENSG00000198901 PRC1 ASE1 protein regulator of cytokinesis 1 protein-coding chr18-310 chr18 13726361 13726605 + 19.2 0.000 promoter-TSS (NM_001098801) promoter-TSS (NM_001098801) 75 NM_152352 125228 Hs.13034 NM_152352 ENSG00000177150 FAM210A C18orf19|HsT2329 family with sequence similarity 210 member A protein-coding chr6-384 chr6 27146874 27147118 + 19.2 0.000 promoter-TSS (NM_080593) promoter-TSS (NM_080593) -86 NM_080596 85235 Hs.352225 NM_080596 ENSG00000274997 HIST1H2AH H2A/S|H2AFALii|H2AH|dJ86C11.1 histone cluster 1 H2A family member h protein-coding chrX-97 chrX 54044330 54044574 + 19.2 0.000 promoter-TSS (NM_001184897) promoter-TSS (NM_001184897) 21 NM_015107 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chrX-147 chrX 129833692 129833936 + 19.2 0.000 intron (NM_016032, intron 3 of 10) intron (NM_016032, intron 3 of 10) 9785 NM_001008222 51114 Hs.193566 NM_016032 ENSG00000188706 ZDHHC9 CGI89|CXorf11|DHHC9|MMSA1|MRXSZ|ZDHHC10|ZNF379|ZNF380 zinc finger DHHC-type containing 9 protein-coding chr9-530 chr9 99030126 99030370 + 19.2 0.000 intron (NM_001855, intron 16 of 41) intron (NM_001855, intron 16 of 41) -74865 NM_004612 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding chr15-727 chr15 83287647 83287891 + 19.2 0.000 Intergenic MER102b|DNA|hAT-Charlie -3105 NM_001717 646 Hs.459153 NM_001717 ENSG00000169594 BNC1 BNC|BSN1|HsT19447 basonuclin 1 protein-coding chr18-103 chr18 34979177 34979421 + 19.2 0.000 intron (NM_001143827, intron 1 of 7) intron (NM_001143827, intron 1 of 7) 931 NM_001143827 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr5-1082 chr5 110657288 110657532 + 19.2 0.000 intron (NM_001039763, intron 2 of 13) L1MA6|LINE|L1 69261 NM_001039763 642987 Hs.729154 NM_001039763 ENSG00000186952 TMEM232 - transmembrane protein 232 protein-coding chr1-1023 chr1 43453309 43453553 + 19.2 0.000 exon (NM_001243526, exon 2 of 9) exon (NM_001243526, exon 2 of 9) 500 NM_001330526 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding chr1-1599 chr1 234676255 234676499 + 19.2 0.000 Intergenic L1ME3A|LINE|L1 30088 NR_125944 101927787 Hs.520658 NR_125944 ENSG00000228044 LOC101927787 - uncharacterized LOC101927787 ncRNA chr2-869 chr2 202911514 202911758 + 19.2 0.000 promoter-TSS (NM_001104586) promoter-TSS (NM_001104586) -582 NM_001282911 79800 Hs.444982 NM_024744 ENSG00000138380 CARF ALS2CR8|NYD-SP24 calcium responsive transcription factor protein-coding chr17-355 chr17 76736433 76736677 + 19.2 0.000 promoter-TSS (NM_001353018) promoter-TSS (NM_001353018) -7 NR_030366 693221 NR_030366 ENSG00000283805 MIR636 MIRN636|hsa-mir-636 microRNA 636 ncRNA chr16-1138 chr16 63292121 63292365 + 19.2 0.000 Intergenic LTR1A2|LTR|ERV1 -1255805 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr4-889 chr4 2034647 2034891 + 19.2 0.000 Intergenic PRIMA41-int|LTR|ERV1 -7224 NM_001168243 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr6-767 chr6 168032058 168032302 + 19.2 0.000 intron (NM_005355, intron 3 of 7) MER4B|LTR|ERV1 14307 NM_005355 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding chr7-1098 chr7 46456300 46456544 + 19.2 0.000 Intergenic Intergenic 240700 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr16-407 chr16 89247630 89247874 + 19.2 0.000 Intergenic CpG 30049 NM_182531 197320 Hs.647385 NM_182531 ENSG00000170100 ZNF778 - zinc finger protein 778 protein-coding chr14-720 chr14 61420059 61420303 + 19.2 0.000 intron (NM_006255, intron 2 of 13) (TG)n|Simple_repeat|Simple_repeat 98738 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr17-448 chr17 40335075 40335319 + 19.2 0.000 intron (NM_001145302, intron 2 of 6) intron (NM_001145302, intron 2 of 6) -6969 NM_001024809 5914 Hs.654583 NM_000964 ENSG00000131759 RARA NR1B1|RAR retinoic acid receptor alpha protein-coding chr11-1136 chr11 65329928 65330172 + 19.2 0.000 Intergenic ERVL-E-int|LTR|ERVL -3802 NM_001330308 5977 Hs.13495 NM_006268 ENSG00000133884 DPF2 CSS7|REQ|UBID4|ubi-d4 double PHD fingers 2 protein-coding chr17-999 chr17 50173566 50173810 + 19.2 0.000 intron (NR_135553, intron 7 of 8) intron (NR_135553, intron 7 of 8) -1212 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr3-1329 chr3 64355587 64355831 + 19.2 0.000 Intergenic Intergenic -87536 NM_001370528 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr14-162 chr14 85533133 85533377 + 19.2 0.000 promoter-TSS (NR_144385) promoter-TSS (NR_144385) -67 NR_144385 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr16-859 chr16 77780495 77780739 + 19.2 0.000 Intergenic Intergenic -7947 NM_020927 57687 Hs.461405 NM_020927 ENSG00000171724 VAT1L - vesicle amine transport 1 like protein-coding chr1-2602 chr1 201719943 201720187 + 19.2 0.000 TTS (NR_049823) TTS (NR_049823) 557 NR_049823 100847050 NR_049823 ENSG00000264802 MIR5191 - microRNA 5191 ncRNA chrX-477 chrX 66759734 66759978 + 19.2 0.000 Intergenic Intergenic -120558 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding chr1-2549 chr1 167249055 167249299 + 19.2 0.000 intron (NM_001365848, intron 2 of 17) intron (NM_001365848, intron 2 of 17) 28291 NM_002697 5451 Hs.283402 NM_002697 ENSG00000143190 POU2F1 OCT1|OTF1|oct-1B POU class 2 homeobox 1 protein-coding chrX-469 chrX 56487380 56487624 + 19.2 0.000 Intergenic L1PA10|LINE|L1 -76091 NM_013444 29978 Hs.179309 NM_013444 ENSG00000188021 UBQLN2 ALS15|CHAP1|DSK2|HRIHFB2157|N4BP4|PLIC2 ubiquilin 2 protein-coding chr2-911 chr2 28566715 28566959 + 19.2 0.000 exon (NM_153021, exon 20 of 58) exon (NM_153021, exon 20 of 58) 480 NR_138141 151056 Hs.444933 NM_153021 ENSG00000163803 PLB1 PLB|PLB/LIP phospholipase B1 protein-coding chr14-812 chr14 104736543 104736787 + 19.2 0.000 intron (NM_199165, intron 2 of 12) intron (NM_199165, intron 2 of 12) 6821 NM_199165 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr15-573 chr15 67472898 67473142 + 19.2 0.000 intron (NR_040051, intron 2 of 5) intron (NR_040051, intron 2 of 5) 47953 NR_040055 100506686 Hs.656245 NR_040051 ENSG00000259673 IQCH-AS1 - IQCH antisense RNA 1 ncRNA chr4-738 chr4 117400139 117400383 + 19.2 0.000 Intergenic Intergenic -28137 NR_125757 103689918 Hs.582062 NR_125757 LINC01378 - long intergenic non-protein coding RNA 1378 ncRNA chr9-416 chr9 137455105 137455349 + 19.2 0.000 intron (NM_001130970, intron 4 of 14) intron (NM_001130970, intron 4 of 14) 4107 NM_015537 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr12-1071 chr12 26748658 26748902 + 19.2 0.000 intron (NM_002223, intron 2 of 56) intron (NM_002223, intron 2 of 56) 84414 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr11-1430 chr11 17277361 17277605 + 19.2 0.000 intron (NM_001352672, intron 1 of 14) intron (NM_001352672, intron 1 of 14) 513 NM_001352671 4925 Hs.654599 NM_005013 ENSG00000070081 NUCB2 HEL-S-109|NEFA nucleobindin 2 protein-coding chr1-1822 chr1 117338174 117338418 + 19.2 0.000 Intergenic MamGyp-int|LTR|Gypsy -29153 NM_006699 10905 Hs.435938 NM_006699 ENSG00000198162 MAN1A2 MAN1B mannosidase alpha class 1A member 2 protein-coding chr12-1171 chr12 84656618 84656862 + 19.2 0.000 Intergenic UCON26|Unknown|Unknown 256059 NM_001146335 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr2-1918 chr2 214585441 214585685 + 19.2 0.000 Intergenic Intergenic 75381 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA chr20-331 chr20 36754650 36754894 + 19.2 0.000 exon (NM_001145318, exon 9 of 10) exon (NM_001145318, exon 9 of 10) -8682 NM_032013 57446 Hs.437338 NM_022477 ENSG00000101079 NDRG3 - NDRG family member 3 protein-coding chrX-231 chrX 153438574 153438818 + 19.2 0.000 Intergenic Intergenic 7791 NM_080701 11219 Hs.644635 NM_080699 ENSG00000183479 TREX2 - three prime repair exonuclease 2 protein-coding chr3-1398 chr3 126960074 126960318 + 19.2 0.000 exon (NM_001320610, exon 8 of 8) exon (NM_001320610, exon 8 of 8) -28398 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr19-1069 chr19 10191296 10191540 + 19.2 0.000 intron (NM_001379, intron 1 of 39) intron (NM_001379, intron 1 of 39) 3535 NM_001379 1786 Hs.202672 NM_001379 ENSG00000130816 DNMT1 ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI DNA methyltransferase 1 protein-coding chr6-1004 chr6 69027743 69027987 + 19.2 0.000 intron (NM_001704, intron 13 of 31) intron (NM_001704, intron 13 of 31) 392583 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding chr9-376 chr9 133163492 133163736 + 19.2 0.000 intron (NM_021996, intron 1 of 6) CpG 300 NM_001288572 26301 Hs.495419 NM_021996 ENSG00000148288 GBGT1 A3GALNT|FS|UNQ2513 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) protein-coding chr3-234 chr3 123884139 123884383 + 19.2 0.000 promoter-TSS (NM_053028) promoter-TSS (NM_053028) 71 NM_053028 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr3-582 chr3 50189237 50189481 + 19.2 0.000 TTS (NM_001318800) TTS (NM_001318800) -2251 NM_144499 2779 Hs.517978 NM_000172 ENSG00000114349 GNAT1 CSNB1G|CSNBAD3|GBT1|GNATR G protein subunit alpha transducin 1 protein-coding chr7-464 chr7 47582059 47582303 + 19.2 0.000 promoter-TSS (NM_022748) promoter-TSS (NM_022748) -70 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr12-1209 chr12 107092231 107092475 + 19.2 0.000 intron (NM_004075, intron 1 of 12) intron (NM_004075, intron 1 of 12) 1196 NM_004075 1407 Hs.151573 NM_004075 ENSG00000008405 CRY1 DSPD|PHLL1 cryptochrome circadian regulator 1 protein-coding chr10-692 chr10 124669365 124669609 + 19.2 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -34541 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr1-1595 chr1 230104779 230105023 + 19.2 0.000 intron (NM_004481, intron 1 of 15) intron (NM_004481, intron 1 of 15) 37663 NM_004481 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding chr14-253 chr14 22838511 22838755 + 19.2 0.000 intron (NM_004995, intron 1 of 9) intron (NM_004995, intron 1 of 9) 2048 NM_004995 4323 Hs.2399 NM_004995 ENSG00000157227 MMP14 MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS matrix metallopeptidase 14 protein-coding chr18-171 chr18 9719676 9719920 + 19.2 0.000 intron (NM_006868, intron 1 of 6) intron (NM_006868, intron 1 of 6) 11497 NM_006868 11031 Hs.99528 NM_006868 ENSG00000168461 RAB31 Rab22B RAB31, member RAS oncogene family protein-coding chr2-796 chr2 216081632 216081876 + 19.2 0.000 promoter-TSS (NM_001142312) promoter-TSS (NM_001142312) 55 NM_018441 55825 Hs.281680 NM_018441 ENSG00000115425 PECR DCRRP|HPDHASE|HSA250303|PVIARL|SDR29C1|TERP peroxisomal trans-2-enoyl-CoA reductase protein-coding chr22-533 chr22 45988677 45988921 + 19.2 0.000 Intergenic Intergenic -11637 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr10-1347 chr10 133233446 133233690 + 19.2 0.000 Intergenic Intergenic 3351 NM_003577 8433 Hs.458406 NM_003577 ENSG00000171794 UTF1 - undifferentiated embryonic cell transcription factor 1 protein-coding chr20-591 chr20 36635439 36635683 + 19.2 0.000 intron (NM_175077, intron 2 of 7) intron (NM_175077, intron 2 of 7) 10635 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr3-867 chr3 128075707 128075951 + 19.2 0.000 promoter-TSS (NR_046645) promoter-TSS (NR_046645) 19 NR_046645 100874089 Hs.581603 NR_046645 ENSG00000239608 RUVBL1-AS1 - RUVBL1 antisense RNA 1 ncRNA chr11-1679 chr11 131242361 131242605 + 19.2 0.000 Intergenic Intergenic -128132 NM_001352006 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr6-181 chr6 145814618 145814862 + 19.2 0.000 promoter-TSS (NM_032145) promoter-TSS (NM_032145) 55 NM_001348092 84085 Hs.421095 NM_032145 ENSG00000118496 FBXO30 Fbx30 F-box protein 30 protein-coding chr1-1292 chr1 21662069 21662313 + 19.2 0.000 intron (NM_002885, intron 1 of 24) MIRc|SINE|MIR 7166 NM_001350524 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr1-632 chr1 8873689 8873933 + 19.2 0.000 intron (NM_001353346, intron 2 of 11) intron (NM_001353346, intron 2 of 11) 4875 NM_001428 2023 Hs.517145 NM_001428 ENSG00000074800 ENO1 ENO1L1|HEL-S-17|MPB1|NNE|PPH enolase 1 protein-coding chr17-1237 chr17 8189912 8190156 + 19.2 0.000 exon (NM_017622, exon 1 of 1) exon (NM_017622, exon 1 of 1) 146 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding chrX-341 chrX 151128052 151128296 + 19.2 0.000 Intergenic LTR41B|LTR|ERVL -40048 NR_036256 100422930 NR_036256 ENSG00000265789 MIR4330 - microRNA 4330 ncRNA chr8-920 chr8 97944048 97944292 + 19.2 0.000 intron (NM_002380, intron 4 of 18) intron (NM_002380, intron 4 of 18) 75106 NM_002380 4147 Hs.189445 NM_002380 ENSG00000132561 MATN2 - matrilin 2 protein-coding chr16-940 chr16 31052118 31052362 + 19.2 0.000 Intergenic AluJr4|SINE|Alu 12848 NM_001172669 79759 Hs.102928 NM_024706 ENSG00000167394 ZNF668 - zinc finger protein 668 protein-coding chr19-1079 chr19 18599544 18599788 + 19.2 0.000 exon (NM_004750, exon 2 of 9) exon (NM_004750, exon 2 of 9) 7133 NM_004750 9244 Hs.114948 NM_004750 ENSG00000006016 CRLF1 CISS|CISS1|CLF|CLF-1|NR6|zcytor5 cytokine receptor like factor 1 protein-coding chr13-334 chr13 50543849 50544093 + 19.2 0.000 Intergenic Intergenic -16522 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr8-941 chr8 114512613 114512857 + 19.2 0.000 Intergenic L1MEb|LINE|L1 -1075796 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr6-1127 chr6 166969747 166969991 + 19.2 0.000 Intergenic LTR10B1|LTR|ERV1 -13319 NM_003730 8635 Hs.529989 NM_003730 ENSG00000026297 RNASET2 RNASE6PL|bA514O12.3 ribonuclease T2 protein-coding chr4-492 chr4 1685096 1685340 + 19.2 0.000 promoter-TSS (NM_001174070) promoter-TSS (NM_001174070) -905 NM_001174070 152877 Hs.143314 NM_001013622 ENSG00000174137 FAM53A DNTNP family with sequence similarity 53 member A protein-coding chr5-933 chr5 141476468 141476712 + 19.2 0.000 exon (NM_032402, exon 1 of 1) exon (NM_032402, exon 1 of 1) 624 NM_002588 5098 Hs.368160 NM_002588 ENSG00000240184 PCDHGC3 PC43|PCDH-GAMMA-C3|PCDH2 protocadherin gamma subfamily C, 3 protein-coding chr7-1139 chr7 103474744 103474988 + 19.2 0.000 intron (NM_005045, intron 63 of 64) intron (NM_005045, intron 63 of 64) -28659 NR_135802 375611 Hs.585146 NM_198999 ENSG00000170615 SLC26A5 DFNB61|PRES solute carrier family 26 member 5 protein-coding chr11-1011 chr11 69300265 69300509 + 19.2 0.000 Intergenic Intergenic 6232 NM_001300923 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding chr6-1031 chr6 94662086 94662330 + 19.2 0.000 Intergenic Intergenic 915243 NR_047502 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA chr8-753 chr8 70172904 70173148 + 19.2 0.000 intron (NM_001321713, intron 4 of 21) intron (NM_001321713, intron 4 of 21) -101774 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr12-636 chr12 45415604 45415848 + 19.2 0.000 intron (NM_001025356, intron 16 of 19) intron (NM_001025356, intron 16 of 19) 123036 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr2-1757 chr2 88805995 88806239 + 19.2 0.000 intron (NR_015424, intron 16 of 16) L2c|LINE|L2 -6253 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr1-1059 chr1 99264401 99264645 + 19.2 0.000 exon (NM_001166252, exon 1 of 6) exon (NM_001166252, exon 1 of 6) 231 NM_001166252 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding chr7-1046 chr7 149147757 149148001 + 19.2 0.000 intron (NM_170686, intron 1 of 5) CpG 426 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chrX-131 chrX 136497214 136497458 + 19.2 0.000 promoter-TSS (NM_014500) promoter-TSS (NM_014500) -256 NM_014500 27336 Hs.204475 NM_014500 ENSG00000102241 HTATSF1 TAT-SF1|TATSF1|dJ196E23.2 HIV-1 Tat specific factor 1 protein-coding chr12-1127 chr12 55029631 55029875 + 19.2 0.000 3' UTR (NM_021191, exon 2 of 2) 3' UTR (NM_021191, exon 2 of 2) 9779 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr22-484 chr22 36252848 36253092 + 19.2 0.000 promoter-TSS (NM_001136540) promoter-TSS (NM_001136540) -101 NM_145343 8542 Hs.114309 NM_003661 ENSG00000100342 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L1 protein-coding chr16-786 chr16 2238465 2238709 + 19.2 0.000 TTS (NM_001919) TTS (NM_001919) 2143 NM_001301680 1775 Hs.103503 NM_001374 ENSG00000167968 DNASE1L2 DNAS1L2 deoxyribonuclease 1 like 2 protein-coding chr3-1050 chr3 170448337 170448581 + 19.2 0.000 Intergenic Intergenic -18826 NR_135557 101928583 Hs.407600 NR_135555 ENSG00000285051 SLC7A14-AS1 - SLC7A14 antisense RNA 1 ncRNA chr3-1045 chr3 159928737 159928981 + 19.2 0.000 intron (NR_108088, intron 9 of 9) L2b|LINE|L2 -59976 NM_001354582 3592 Hs.673 NM_000882 ENSG00000168811 IL12A CLMF|IL-12A|NFSK|NKSF1|P35 interleukin 12A protein-coding chr19-1509 chr19 10921652 10921896 + 19.2 0.000 TTS (NM_001321439) TTS (NM_001321439) 6865 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr5-1145 chr5 149387178 149387422 + 19.2 0.000 intron (NM_001317987, intron 1 of 2) intron (NM_001317987, intron 1 of 2) -8008 NM_014443 27190 Hs.156979 NM_014443 ENSG00000127743 IL17B IL-17B|IL-20|NIRF|ZCYTO7 interleukin 17B protein-coding chr9-1210 chr9 63817989 63818233 + 19.2 0.000 non-coding (NR_146625, exon 2 of 2) non-coding (NR_146625, exon 2 of 2) -1463 NR_039689 100616194 NR_039689 ENSG00000266017 MIR4477B - microRNA 4477b ncRNA chr2-1178 chr2 241491226 241491470 + 19.2 0.000 intron (NM_014808, intron 23 of 26) intron (NM_014808, intron 23 of 26) 13443 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr14-538 chr14 58078130 58078374 + 19.2 0.000 intron (NM_001001872, intron 5 of 7) L3|LINE|CR1 73961 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding chr18-125 chr18 3593941 3594185 + 19.2 0.000 promoter-TSS (NR_024101) promoter-TSS (NR_024101) -51 NR_024101 649446 Hs.19872 NM_001039796 DLGAP1-AS1 HsT914 DLGAP1 antisense RNA 1 ncRNA chr22-145 chr22 43205880 43206124 + 19.2 0.000 intron (NM_173050, intron 21 of 21) (AC)n|Simple_repeat|Simple_repeat -6672 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr3-1437 chr3 144778605 144778849 + 19.2 0.000 Intergenic Intergenic 805646 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr12-1263 chr12 124322607 124322851 + 19.2 0.000 Intergenic Intergenic 14513 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chrX-175 chrX 19682839 19683083 + 19.2 0.000 intron (NM_001024666, intron 5 of 16) intron (NM_001024666, intron 5 of 16) -11962 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr19-517 chr19 40403605 40403849 + 19.2 0.000 exon (NM_181882, exon 5 of 7) exon (NM_181882, exon 5 of 7) 9637 NM_020956 57716 Hs.205457 NM_020956 ENSG00000105227 PRX CMT4F periaxin protein-coding chr12-840 chr12 55068484 55068728 + 19.2 0.000 Intergenic Intergenic 48632 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding chr20-61 chr20 653231 653475 + 19.2 0.000 promoter-TSS (NM_080725) promoter-TSS (NM_080725) -153 NM_080725 140809 Hs.516830 NM_080725 ENSG00000271303 SRXN1 C20orf139|Npn3|SRX|SRX1 sulfiredoxin 1 protein-coding chr2-1418 chr2 240800293 240800537 + 19.2 0.000 intron (NM_004321, intron 1 of 46) intron (NM_004321, intron 1 of 46) 19804 NM_001330289 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr10-1190 chr10 72354133 72354377 + 19.2 0.000 intron (NR_157570, intron 1 of 8) CpG 664 NR_157570 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr3-404 chr3 101779162 101779406 + 19.2 0.000 promoter-TSS (NM_001348998) promoter-TSS (NM_001348998) 73 NM_001348992 91775 Hs.595933 NM_145037 ENSG00000144815 NXPE3 FAM55C|MST115|MSTP115 neurexophilin and PC-esterase domain family member 3 protein-coding chr9-1206 chr9 39809597 39809841 + 19.2 0.000 non-coding (NR_126046, exon 1 of 2) non-coding (NR_126046, exon 1 of 2) 440 NR_015363 389741 Hs.380240 NM_203448 ENSG00000278175 GLIDR LINC01172|TCONS_00015562 glioblastoma down-regulated RNA ncRNA chr10-557 chr10 123622110 123622354 + 19.2 0.000 Intergenic L1ME4b|LINE|L1 -44123 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr4-818 chr4 57111079 57111323 + 19.2 0.000 promoter-TSS (NM_001253835) promoter-TSS (NM_001253835) -816 NM_001553 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr15-456 chr15 39586921 39587165 + 19.2 0.000 intron (NM_003246, intron 7 of 21) L1MA9|LINE|L1 5964 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr5-1163 chr5 159576227 159576471 + 19.2 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -110073 NR_027110 285627 Hs.552766 NR_027110 ENSG00000253298 LINC01845 - long intergenic non-protein coding RNA 1845 ncRNA chrX-150 chrX 149540750 149540994 + 19.2 0.000 promoter-TSS (NM_001171908) promoter-TSS (NM_001171908) -140 NM_001171908 91966 Hs.458216 NM_178124 ENSG00000197620 CXorf40A CXorf40|EOLA1 chromosome X open reading frame 40A protein-coding chr2-1789 chr2 110809370 110809614 + 19.2 0.000 intron (NM_001371254, intron 9 of 18) intron (NM_001371254, intron 9 of 18) 76919 NM_001371254 chr14-443 chr14 101621746 101621990 + 19.2 0.000 Intergenic FordPrefect|DNA|hAT-Tip100 60517 NM_001362 1735 Hs.49322 NM_001362 ENSG00000197406 DIO3 5DIII|D3|DIOIII|TXDI3 iodothyronine deiodinase 3 protein-coding chr10-590 chr10 90931168 90931412 + 19.2 0.000 Intergenic Intergenic -10015 NM_014391 27063 Hs.448589 NM_014391 ENSG00000148677 ANKRD1 ALRP|C-193|CARP|CVARP|MCARP|bA320F15.2 ankyrin repeat domain 1 protein-coding chr15-715 chr15 79970995 79971239 + 19.2 0.000 promoter-TSS (NM_001114735) promoter-TSS (NM_001114735) 79 NM_001114735 597 Hs.227817 NM_004049 ENSG00000140379 BCL2A1 ACC-1|ACC-2|ACC1|ACC2|BCL2L5|BFL1|GRS|HBPA1 BCL2 related protein A1 protein-coding chr22-528 chr22 45478359 45478603 + 19.2 0.000 Intergenic L1ME4c|LINE|L1 -24402 NM_001996 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr4-258 chr4 31458955 31459199 + 19.2 0.000 Intergenic LTR78B|LTR|ERV1 -47467 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA chr9-717 chr9 130701340 130701584 + 19.2 0.000 intron (NM_001282709, intron 5 of 7) intron (NM_001282709, intron 5 of 7) 7682 NM_014285 23404 Hs.654643 NM_014285 ENSG00000130713 EXOSC2 RRP4|Rrp4p|SHRF|hRrp4p|p7 exosome component 2 protein-coding chr20-563 chr20 25861514 25861758 + 19.2 0.000 Intergenic SST1|Satellite|centr -7615 NR_110001 101926935 Hs.737440 NR_110001 LOC101926935 - uncharacterized LOC101926935 ncRNA chr5-929 chr5 138597844 138598088 + 19.2 0.000 Intergenic Intergenic -22565 NM_004134 3313 Hs.184233 NM_004134 ENSG00000113013 HSPA9 CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4 heat shock protein family A (Hsp70) member 9 protein-coding chr6-759 chr6 158838185 158838429 + 19.2 0.000 Intergenic Intergenic -18939 NM_001111077 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr2-1246 chr2 61180145 61180389 + 19.2 0.000 intron (NR_152210, intron 1 of 5) intron (NR_152210, intron 1 of 5) 2849 NR_152211 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr1-1419 chr1 182839030 182839274 + 19.2 0.000 promoter-TSS (NR_033302) promoter-TSS (NR_033302) -195 NM_001357 1660 Hs.191518 NM_001357 ENSG00000135829 DHX9 DDX9|LKP|NDH2|NDHII|RHA DExH-box helicase 9 protein-coding chr20-568 chr20 31972631 31972875 + 19.2 0.000 intron (NM_001011718, intron 1 of 2) intron (NM_001011718, intron 1 of 2) 4602 NM_001011718 343702 Hs.666444 NM_001011718 ENSG00000260903 XKR7 C20orf159|dJ310O13.4 XK related 7 protein-coding chr13-492 chr13 75908227 75908471 + 19.2 0.000 Intergenic MIR|SINE|MIR 26783 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr2-950 chr2 69548157 69548401 + 19.2 0.000 intron (NM_014911, intron 3 of 21) intron (NM_014911, intron 3 of 21) -28108 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr12-1252 chr12 122518022 122518266 + 19.2 0.000 intron (NM_023012, intron 4 of 9) AluJb|SINE|Alu 8792 NM_023012 65117 Hs.432996 NM_023012 ENSG00000111011 RSRC2 - arginine and serine rich coiled-coil 2 protein-coding chr12-1003 chr12 120264134 120264378 + 19.2 0.000 intron (NM_002859, intron 1 of 10) intron (NM_002859, intron 1 of 10) 1474 NM_002859 5829 Hs.446336 NM_002859 ENSG00000089159 PXN - paxillin protein-coding chr13-301 chr13 113622760 113623004 + 19.2 0.000 intron (NM_007111, intron 3 of 11) intron (NM_007111, intron 3 of 11) 35316 NM_000705 496 Hs.434202 NM_000705 ENSG00000186009 ATP4B ATP6B ATPase H+/K+ transporting subunit beta protein-coding chr18-135 chr18 13611618 13611862 + 19.2 0.000 promoter-TSS (NM_001276249) promoter-TSS (NM_001276249) -24 NM_001276249 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr5-345 chr5 134846265 134846509 + 19.2 0.000 intron (NM_001135586, intron 1 of 1) CpG 419 NM_001300894 134553 Hs.708536 NM_152409 ENSG00000181904 C5orf24 - chromosome 5 open reading frame 24 protein-coding chr1-875 chr1 155320768 155321012 + 19.2 0.000 promoter-TSS (NM_001105203) promoter-TSS (NM_001105203) -4 NM_001105204 23623 Hs.226499 NM_014328 ENSG00000160753 RUSC1 NESCA RUN and SH3 domain containing 1 protein-coding chr1-2000 chr1 22375704 22375948 + 19.2 0.000 Intergenic Intergenic -76025 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr1-1660 chr1 14898632 14898876 + 19.2 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) -25375 NM_001370229 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-1412 chr1 169106325 169106569 + 19.2 0.000 promoter-TSS (NM_001677) promoter-TSS (NM_001677) -243 NM_001677 481 Hs.291196 NM_001677 ENSG00000143153 ATP1B1 ATP1B ATPase Na+/K+ transporting subunit beta 1 protein-coding chr5-809 chr5 143985824 143986068 + 19.2 0.000 Intergenic Intergenic 173785 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr2-1412 chr2 239267679 239267923 + 19.2 0.000 intron (NM_006037, intron 2 of 26) intron (NM_006037, intron 2 of 26) -37661 NR_036229 100423043 NR_036229 ENSG00000265215 MIR4269 - microRNA 4269 ncRNA chr20-639 chr20 57224796 57225040 + 19.2 0.000 intron (NM_001719, intron 2 of 6) intron (NM_001719, intron 2 of 6) 11222 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA chr19-1382 chr19 45866768 45867012 + 19.2 0.000 intron (NM_004497, intron 1 of 1) intron (NM_004497, intron 1 of 1) 2564 NM_004497 3171 Hs.36137 NM_004497 ENSG00000170608 FOXA3 FKHH3|HNF3G|TCF3G forkhead box A3 protein-coding chr17-1019 chr17 64614446 64614690 + 19.2 0.000 intron (NM_022739, intron 1 of 18) intron (NM_022739, intron 1 of 18) 47739 NM_022739 64750 Hs.515011 NM_022739 ENSG00000108854 SMURF2 - SMAD specific E3 ubiquitin protein ligase 2 protein-coding chr11-1365 chr11 125082842 125083086 + 19.2 0.000 intron (NM_001145290, intron 10 of 17) intron (NM_001145290, intron 10 of 17) 19659 NM_001145290 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding chr15-620 chr15 39720542 39720786 + 19.2 0.000 intron (NM_152597, intron 9 of 11) intron (NM_152597, intron 9 of 11) 62177 NM_152597 161835 Hs.129598 NM_152597 ENSG00000150667 FSIP1 HSD10 fibrous sheath interacting protein 1 protein-coding chr7-681 chr7 1638388 1638632 + 19.1 0.000 Intergenic Intergenic 24040 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr16-1191 chr16 83705854 83706098 + 19.1 0.000 intron (NM_001220489, intron 9 of 12) MLT1G3|LTR|ERVL-MaLR 98000 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA chr19-815 chr19 39363826 39364070 + 19.1 0.000 intron (NM_018028, intron 5 of 15) intron (NM_018028, intron 5 of 15) 21489 NM_001303614 55095 Hs.612332 NM_018028 ENSG00000179134 SAMD4B SMGB|Smaug2 sterile alpha motif domain containing 4B protein-coding chr19-1479 chr19 5177012 5177256 + 19.1 0.000 Intergenic AluSq|SINE|Alu 163678 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr13-196 chr13 113546452 113546696 + 19.1 0.000 intron (NR_146221, intron 9 of 10) intron (NR_146221, intron 9 of 10) -38114 NR_026580 7027 Hs.79353 NM_007111 ENSG00000198176 TFDP1 DILC|DP1|DRTF1|Dp-1 transcription factor Dp-1 protein-coding chr12-965 chr12 52570672 52570916 + 19.1 0.000 exon (NM_175053, exon 5 of 9) exon (NM_175053, exon 5 of 9) 3049 NM_175053 121391 Hs.660125 NM_175053 ENSG00000170484 KRT74 ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4 keratin 74 protein-coding chr10-695 chr10 125090772 125091016 + 19.1 0.000 intron (NM_001321013, intron 1 of 9) MIR|SINE|MIR -58024 NR_036178 100423041 NR_036178 ENSG00000264572 MIR4296 - microRNA 4296 ncRNA chr7-977 chr7 76805903 76806147 + 19.1 0.000 Intergenic Intergenic -174797 NR_023383 441263 Hs.675888 NR_023383 ENSG00000265479 DTX2P1-UPK3BP1-PMS2P11 PMS2L11 DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene pseudo chr7-1145 chr7 114790001 114790245 + 19.1 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR -132031 NM_199072 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr1-2491 chr1 119674224 119674468 + 19.1 0.000 Intergenic LTR64|LTR|ERV1 -26080 NM_001080470 90874 Hs.381105 NM_001080470 ENSG00000143067 ZNF697 - zinc finger protein 697 protein-coding chr4-514 chr4 26320477 26320721 + 19.1 0.000 promoter-TSS (NM_015874) promoter-TSS (NM_015874) -208 NM_203284 3516 Hs.479396 NM_005349 ENSG00000168214 RBPJ AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl recombination signal binding protein for immunoglobulin kappa J region protein-coding chr19-1274 chr19 46898806 46899050 + 19.1 0.000 intron (NM_004491, intron 1 of 6) LTR33A|LTR|ERVL 37931 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr16-296 chr16 2467632 2467876 + 19.1 0.000 non-coding (NR_135198, exon 1 of 1) non-coding (NR_135198, exon 1 of 1) 459 NR_135198 729652 Hs.638553 NR_135198 ENSG00000259895 LOC729652 - uncharacterized LOC729652 ncRNA chr2-999 chr2 171922187 171922431 + 19.1 0.000 promoter-TSS (NM_003642) promoter-TSS (NM_003642) -116 NR_027862 8520 Hs.632532 NM_003642 ENSG00000128708 HAT1 KAT1 histone acetyltransferase 1 protein-coding chr17-838 chr17 3475796 3476040 + 19.1 0.000 promoter-TSS (NM_000049) promoter-TSS (NM_000049) -79 NM_000049 443 Hs.171142 NM_000049 ENSG00000108381 ASPA ACY2|ASP aspartoacylase protein-coding chr5-1035 chr5 54951169 54951413 + 19.1 0.000 Intergenic Intergenic 34302 NM_007036 11082 Hs.129944 NM_007036 ENSG00000164283 ESM1 endocan endothelial cell specific molecule 1 protein-coding chr11-1462 chr11 44136641 44136885 + 19.1 0.000 intron (NM_207122, intron 7 of 13) intron (NM_207122, intron 7 of 13) 40566 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr9-829 chr9 134788234 134788478 + 19.1 0.000 intron (NM_001278074, intron 31 of 65) (GGAT)n|Simple_repeat|Simple_repeat 61013 NR_039691 100616333 NR_039691 ENSG00000264744 MIR3689C - microRNA 3689c ncRNA chr3-862 chr3 123459848 123460092 + 19.1 0.000 Intergenic Intergenic -11425 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr14-566 chr14 87313742 87313986 + 19.1 0.000 Intergenic MIRc|SINE|MIR 341430 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA chr7-393 chr7 101017309 101017553 + 19.1 0.000 non-coding (NR_120519, exon 1 of 3) non-coding (NR_120519, exon 1 of 3) 177 NR_120520 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr5-774 chr5 112476196 112476440 + 19.1 0.000 Intergenic Intergenic 56735 NR_027706 54508 Hs.591264 NR_027706 ENSG00000278921 EPB41L4A-DT EPB41L4A-AS2 EPB41L4A divergent transcript ncRNA chr1-1888 chr1 196651805 196652049 + 19.1 0.000 promoter-TSS (NM_000186) promoter-TSS (NM_000186) 49 NM_001014975 3075 Hs.363396 NM_000186 ENSG00000000971 CFH AHUS1|AMBP1|ARMD4|ARMS1|CFHL3|FH|FHL1|HF|HF1|HF2|HUS complement factor H protein-coding chr6-1073 chr6 136403224 136403468 + 19.1 0.000 intron (NM_001198611, intron 3 of 16) MIR|SINE|MIR 63529 NM_001198615 9053 Hs.486548 NM_003980 ENSG00000135525 MAP7 E-MAP-115|EMAP115 microtubule associated protein 7 protein-coding chr10-711 chr10 133512834 133513078 + 19.1 0.000 Intergenic L1MCc|LINE|L1 -14407 NM_000773 1571 Hs.12907 NM_000773 ENSG00000130649 CYP2E1 CPE1|CYP2E|P450-J|P450C2E cytochrome P450 family 2 subfamily E member 1 protein-coding chr16-455 chr16 88805365 88805609 + 19.1 0.000 exon (NM_030928, exon 4 of 10) exon (NM_030928, exon 4 of 10) 1698 NM_030928 81620 Hs.122908 NM_030928 ENSG00000167513 CDT1 DUP|RIS2 chromatin licensing and DNA replication factor 1 protein-coding chr13-473 chr13 50353556 50353800 + 19.1 0.000 intron (NR_109974, intron 2 of 6) intron (NR_109974, intron 2 of 6) 173771 NR_125753 103689915 Hs.722230 NR_125753 ENSG00000186047 DLEU1-AS1 LINC01308 DLEU1 antisense RNA 1 ncRNA chr1-491 chr1 65002759 65003003 + 19.1 0.000 promoter-TSS (NR_119383) promoter-TSS (NR_119383) -405 NR_119383 101927084 Hs.734218 NR_119383 ENSG00000226891 LINC01359 - long intergenic non-protein coding RNA 1359 ncRNA chr22-357 chr22 44363465 44363709 + 19.1 0.000 Intergenic Intergenic -50636 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr7-803 chr7 1292663 1292907 + 19.1 0.000 Intergenic Intergenic 59913 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr6-1049 chr6 111824165 111824409 + 19.1 0.000 intron (NM_153047, intron 2 of 13) intron (NM_153047, intron 2 of 13) 48784 NM_153047 2534 Hs.390567 NM_002037 ENSG00000010810 FYN SLK|SYN|p59-FYN FYN proto-oncogene, Src family tyrosine kinase protein-coding chr7-1224 chr7 14120341 14120585 + 19.1 0.000 Intergenic Intergenic -129038 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding chr17-1044 chr17 76772961 76773205 + 19.1 0.000 intron (NM_001353019, intron 11 of 13) L1MEc|LINE|L1 -25961 NR_110837 101928514 Hs.617206 NR_110837 ENSG00000267065 LINC02080 - long intergenic non-protein coding RNA 2080 ncRNA chr5-1002 chr5 32027977 32028221 + 19.1 0.000 intron (NM_178140, intron 6 of 24) intron (NM_178140, intron 6 of 24) -91940 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr17-1025 chr17 66824632 66824876 + 19.1 0.000 Intergenic Intergenic -10363 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding chr12-785 chr12 124393225 124393469 + 19.1 0.000 intron (NM_001077261, intron 18 of 47) intron (NM_001077261, intron 18 of 47) -56105 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr9-1378 chr9 133904324 133904568 + 19.1 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 87878 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr12-944 chr12 27966846 27967090 + 19.1 0.000 intron (NM_198964, intron 2 of 2) intron (NM_198964, intron 2 of 2) 3008 NM_198966 5744 Hs.591159 NM_002820 ENSG00000087494 PTHLH BDE2|HHM|PLP|PTHR|PTHRP parathyroid hormone like hormone protein-coding chr22-376 chr22 22922053 22922297 + 19.1 0.000 Intergenic Intergenic 34359 NM_001178126 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr6-523 chr6 56642903 56643147 + 19.1 0.000 promoter-TSS (NM_001723) promoter-TSS (NM_001723) -136 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr10-287 chr10 24724582 24724826 + 19.1 0.000 promoter-TSS (NM_020824) promoter-TSS (NM_020824) -817 NM_001367447 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr3-809 chr3 195542804 195543048 + 19.1 0.000 exon (NM_006241, exon 1 of 6) exon (NM_006241, exon 1 of 6) 399 NM_001291504 5504 Hs.535731 NM_006241 ENSG00000184203 PPP1R2 IPP-2|IPP2|PPP1R2A protein phosphatase 1 regulatory inhibitor subunit 2 protein-coding chr16-845 chr16 68363630 68363874 + 19.1 0.000 intron (NM_018667, intron 6 of 8) intron (NM_018667, intron 6 of 8) 52638 NM_001290018 54496 Hs.640229 NM_019023 ENSG00000132600 PRMT7 SBIDDS protein arginine methyltransferase 7 protein-coding chr14-489 chr14 77028512 77028756 + 19.1 0.000 promoter-TSS (NM_024496) promoter-TSS (NM_024496) 74 NM_024496 64207 Hs.179260 NM_024496 ENSG00000119669 IRF2BPL C14orf4|EAP1|NEDAMSS interferon regulatory factor 2 binding protein like protein-coding chr7-931 chr7 30911826 30912070 + 19.1 0.000 promoter-TSS (NM_001329872) promoter-TSS (NM_001329872) 95 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr16-724 chr16 53549921 53550165 + 19.1 0.000 Intergenic Intergenic -46739 NM_001308325 64400 Hs.380897 NM_022476 ENSG00000166971 AKTIP FT1|FTS AKT interacting protein protein-coding chr7-1099 chr7 46672776 46673020 + 19.1 0.000 Intergenic Intergenic 24224 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr1-2659 chr1 227299183 227299427 + 19.1 0.000 intron (NM_001366019, intron 1 of 36) intron (NM_001366019, intron 1 of 36) 19187 NM_001366019 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr3-1164 chr3 144110013 144110257 + 19.1 0.000 Intergenic L2a|LINE|L2 137054 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr9-847 chr9 5549841 5550085 + 19.1 0.000 intron (NM_025239, intron 4 of 6) LTR33|LTR|ERVL 39432 NM_025239 80380 Hs.532279 NM_025239 ENSG00000197646 PDCD1LG2 B7DC|Btdc|CD273|PD-L2|PDCD1L2|PDL2|bA574F11.2 programmed cell death 1 ligand 2 protein-coding chr4-661 chr4 3828120 3828364 + 19.1 0.000 Intergenic Intergenic 61857 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr5-241 chr5 139697319 139697563 + 19.1 0.000 Intergenic CpG 21998 NM_001317209 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr11-449 chr11 2378982 2379226 + 19.1 0.000 intron (NM_004356, intron 1 of 7) intron (NM_004356, intron 1 of 7) -1112 NR_108080 101927682 Hs.675920 NR_108080 ENSG00000238184 CD81-AS1 - CD81 antisense RNA 1 ncRNA chr16-525 chr16 49639823 49640067 + 19.1 0.000 intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) 24379 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr8-874 chr8 54554473 54554717 + 19.1 0.000 Intergenic Intergenic -61501 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr2-884 chr2 238370842 238371086 + 19.1 0.000 intron (NM_001139490, intron 13 of 14) intron (NM_001139490, intron 13 of 14) 50420 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding chr16-636 chr16 21104206 21104450 + 19.1 0.000 intron (NM_001347886, intron 16 of 61) intron (NM_001347886, intron 16 of 61) 46518 NM_001347886 55567 Hs.526500 NM_017539 ENSG00000158486 DNAH3 DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3 dynein axonemal heavy chain 3 protein-coding chrX-390 chrX 109503801 109504045 + 19.1 0.000 Intergenic ERVL-B4-int|LTR|ERVL -21837 NM_001522 2986 Hs.123074 NM_001522 ENSG00000101890 GUCY2F CYGF|GC-F|GUC2DL|GUC2F|RETGC-2|ROS-GC2 guanylate cyclase 2F, retinal protein-coding chr3-692 chr3 3179481 3179725 + 19.1 0.000 intron (NM_016302, intron 1 of 10) CpG 114 NM_016302 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding chr18-348 chr18 58785425 58785669 + 19.1 0.000 Intergenic Intergenic -28333 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr2-1132 chr2 160306988 160307232 + 19.1 0.000 intron (NM_002897, intron 4 of 13) intron (NM_002897, intron 4 of 13) -35215 NR_103775 100505984 Hs.729532 NR_103775 ENSG00000285373 LINC02478 - long intergenic non-protein coding RNA 2478 ncRNA chr2-967 chr2 100292103 100292347 + 19.1 0.000 intron (NM_198461, intron 9 of 11) intron (NM_198461, intron 9 of 11) 30508 NM_198461 164832 Hs.21380 NM_198461 ENSG00000170500 LONRF2 RNF192 LON peptidase N-terminal domain and ring finger 2 protein-coding chr1-1794 chr1 91030580 91030824 + 19.1 0.000 Intergenic L2b|LINE|L2 -8447 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding chr7-891 chr7 1894018 1894262 + 19.1 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 46431 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr15-656 chr15 59448944 59449188 + 19.1 0.000 intron (NM_152450, intron 1 of 8) intron (NM_152450, intron 1 of 8) 10880 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr17-584 chr17 2594252 2594496 + 19.1 0.000 intron (NM_000430, intron 1 of 10) CpG 720 NM_000430 5048 Hs.77318 NM_000430 ENSG00000007168 PAFAH1B1 LIS1|LIS2|MDCR|MDS|NudF|PAFAH platelet activating factor acetylhydrolase 1b regulatory subunit 1 protein-coding chr10-1026 chr10 94671206 94671450 + 19.1 0.000 Intergenic AluJb|SINE|Alu -12401 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding chr10-739 chr10 77565560 77565804 + 19.1 0.000 intron (NM_001271519, intron 1 of 28) MIR|SINE|MIR 72126 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr9-836 chr9 136748191 136748435 + 19.1 0.000 non-coding (NR_033913, exon 2 of 3) non-coding (NR_033913, exon 2 of 3) 212 NM_198946 158062 Hs.522504 NM_198946 ENSG00000267206 LCN6 LCN5|UNQ643|hLcn5 lipocalin 6 protein-coding chr2-1078 chr2 35813145 35813389 + 19.1 0.000 Intergenic MSTA|LTR|ERVL-MaLR 341862 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA chr12-769 chr12 106956604 106956848 + 19.1 0.000 promoter-TSS (NM_001319662) promoter-TSS (NM_001319662) -59 NM_001319662 90488 Hs.257664 NM_152261 ENSG00000151135 TMEM263 C12orf23 transmembrane protein 263 protein-coding chr11-1451 chr11 34570614 34570858 + 19.1 0.000 Intergenic Intergenic -50357 NM_012153 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding chr19-1407 chr19 643466 643710 + 19.1 0.000 TTS (NM_020637) TTS (NM_020637) 3662 NM_020637 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr11-1455 chr11 35588690 35588934 + 19.1 0.000 Intergenic MLT2D|LTR|ERVL -29648 NM_014344 24147 Hs.39384 NM_014344 ENSG00000179431 FJX1 - four-jointed box kinase 1 protein-coding chr13-131 chr13 51643952 51644196 + 19.1 0.000 intron (NM_052950, intron 1 of 11) intron (NM_052950, intron 1 of 11) 59612 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr14-479 chr14 69335369 69335613 + 19.1 0.000 intron (NM_020692, intron 9 of 15) Tigger19b|DNA|TcMar-Tigger 62808 NM_004450 2079 Hs.509791 NM_004450 ENSG00000100632 ERH DROER ERH mRNA splicing and mitosis factor protein-coding chr8-712 chr8 143914670 143914914 + 19.1 0.000 TTS (NM_201380) TTS (NM_201380) 24805 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr1-773 chr1 86370620 86370864 + 19.1 0.000 intron (NM_001007022, intron 10 of 17) intron (NM_001007022, intron 10 of 17) -13055 NR_107010 102465842 NR_107010 ENSG00000278281 MIR7856 hsa-mir-7856 microRNA 7856 ncRNA chr12-522 chr12 53049765 53050009 + 19.1 0.000 promoter-TSS (NM_170754) promoter-TSS (NM_170754) -178 NM_170754 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding chr3-434 chr3 196712360 196712604 + 19.1 0.000 promoter-TSS (NM_032898) promoter-TSS (NM_032898) 105 NM_017861 54965 Hs.223296 NM_017861 ENSG00000163964 PIGX PIG-X phosphatidylinositol glycan anchor biosynthesis class X protein-coding chr2-1386 chr2 222753510 222753754 + 19.1 0.000 Intergenic Intergenic 81974 NM_058165 116255 Hs.344090 NM_058165 ENSG00000124003 MOGAT1 DGAT2L|DGAT2L1|MGAT1 monoacylglycerol O-acyltransferase 1 protein-coding chr3-622 chr3 151816046 151816290 + 19.1 0.000 intron (NM_001086, intron 1 of 4) intron (NM_001086, intron 1 of 4) 2052 NM_001086 13 Hs.506908 NM_001086 ENSG00000114771 AADAC CES5A1|DAC arylacetamide deacetylase protein-coding chr19-694 chr19 39397802 39398046 + 19.1 0.000 non-coding (NR_133915, exon 3 of 3) non-coding (NR_133915, exon 3 of 3) 6546 NR_133915 55588 Hs.611541 NM_017592 ENSG00000063322 MED29 IXL|MED2 mediator complex subunit 29 protein-coding chr9-730 chr9 134430603 134430847 + 19.1 0.000 intron (NM_002957, intron 7 of 9) intron (NM_002957, intron 7 of 9) 24165 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr19-1135 chr19 1192454 1192698 + 19.1 0.000 Intergenic Intergenic -13223 NM_000455 6794 Hs.515005 NM_000455 ENSG00000118046 STK11 LKB1|PJS|hLKB1 serine/threonine kinase 11 protein-coding chr2-248 chr2 64018654 64018898 + 19.1 0.000 intron (NM_001005739, intron 1 of 22) intron (NM_001005739, intron 1 of 22) 652 NM_001005739 51542 Hs.48499 NM_016516 ENSG00000143952 VPS54 HCC8|PPP1R164|SLP-8p|VPS54L|WR|hVps54L VPS54 subunit of GARP complex protein-coding chr7-625 chr7 37448805 37449049 + 19.1 0.000 promoter-TSS (NM_014800) promoter-TSS (NM_014800) 25 NM_014800 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding chr15-462 chr15 40765369 40765613 + 19.1 0.000 3' UTR (NM_018163, exon 11 of 11) 3' UTR (NM_018163, exon 11 of 11) 1423 NM_005258 2644 Hs.631717 NM_005258 ENSG00000137880 GCHFR GFRP|HsT16933|P35 GTP cyclohydrolase I feedback regulator protein-coding chr5-740 chr5 50744690 50744934 + 19.1 0.000 intron (NM_024615, intron 2 of 25) intron (NM_024615, intron 2 of 25) 77398 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding chr1-1940 chr1 228358375 228358619 + 19.1 0.000 intron (NM_052843, intron 80 of 80) intron (NM_052843, intron 80 of 80) 38612 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr11-795 chr11 64314053 64314297 + 19.1 0.000 intron (NM_001282451, intron 3 of 6) intron (NM_001282451, intron 3 of 6) 3909 NM_001286084 51504 Hs.333579 NM_016404 ENSG00000173113 TRMT112 HSPC152|HSPC170|TRM112|TRMT11-2|hTrm112 tRNA methyltransferase subunit 11-2 protein-coding chrX-435 chrX 31435638 31435882 + 19.1 0.000 intron (NM_000109, intron 60 of 78) intron (NM_000109, intron 60 of 78) 72538 NM_004014 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr5-361 chr5 9851465 9851709 + 19.1 0.000 intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -2790 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA chr17-1102 chr17 3974521 3974765 + 19.1 0.000 Intergenic Intergenic -2460 NR_146884 105371496 Hs.579239 NR_146884 LINC01975 - long intergenic non-protein coding RNA 1975 ncRNA chr3-1172 chr3 156291734 156291978 + 19.1 0.000 5' UTR (NM_001308222, exon 1 of 13) 5' UTR (NM_001308222, exon 1 of 13) 819 NM_001308222 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding chr1-1889 chr1 196768749 196768993 + 19.1 0.000 Intergenic Intergenic -5929 NM_001166624 10878 Hs.709217 NM_021023 ENSG00000116785 CFHR3 CFHL3|DOWN16|FHR-3|FHR3|HLF4 complement factor H related 3 protein-coding chr20-418 chr20 34312799 34313043 + 19.1 0.000 Intergenic MIRc|SINE|MIR -1119 NM_001161766 191 Hs.388004 NM_000687 ENSG00000101444 AHCY SAHH|adoHcyase adenosylhomocysteinase protein-coding chr8-954 chr8 125435830 125436074 + 19.1 0.000 intron (NM_025195, intron 2 of 2) intron (NM_025195, intron 2 of 2) 3743 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr1-1233 chr1 247210300 247210544 + 19.1 0.000 Intergenic Intergenic -8362 NR_037480 100500849 NR_037480 ENSG00000283881 MIR3916 mir-3916 microRNA 3916 ncRNA chr13-247 chr13 51764828 51765072 + 19.1 0.000 3' UTR (NM_052950, exon 12 of 12) 3' UTR (NM_052950, exon 12 of 12) 39212 NM_001270424 79758 Hs.266728 NM_024705 ENSG00000102796 DHRS12 SDR40C1 dehydrogenase/reductase 12 protein-coding chr12-854 chr12 67010763 67011007 + 19.1 0.000 Intergenic L2a|LINE|L2 85399 NR_120490 102724421 Hs.135774 NR_120490 ENSG00000257083 LOC102724421 - uncharacterized LOC102724421 ncRNA chr7-899 chr7 2811623 2811867 + 19.1 0.000 intron (NM_001293092, intron 1 of 2) intron (NM_001293092, intron 1 of 2) 3485 NM_001282441 2768 Hs.487341 NM_007353 ENSG00000146535 GNA12 NNX3|RMP|gep G protein subunit alpha 12 protein-coding chr1-2440 chr1 91569900 91570144 + 19.1 0.000 Intergenic Intergenic 68914 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr1-2393 chr1 54792916 54793160 + 19.1 0.000 intron (NM_001114108, intron 1 of 6) intron (NM_001114108, intron 1 of 6) 8285 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr14-708 chr14 54576714 54576958 + 19.1 0.000 intron (NM_015589, intron 1 of 11) L3|LINE|CR1 9224 NM_015589 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding chr2-620 chr2 85538868 85539112 + 19.1 0.000 promoter-TSS (NR_038942) promoter-TSS (NR_038942) -104 NR_038942 100630918 Hs.66049 NR_038942 PARTICL PARTICLE promoter of MAT2A antisense radiation-induced circulating long non-coding RNA ncRNA chr5-436 chr5 169980443 169980687 + 19.1 0.000 promoter-TSS (NM_001346304) promoter-TSS (NM_001346304) -70 NM_001346304 100131897 Hs.721917 NM_001129891 ENSG00000204767 INSYN2B C5orf57|FAM196B inhibitory synaptic factor family member 2B protein-coding chr5-787 chr5 134187545 134187789 + 19.1 0.000 Intergenic Intergenic -10634 NM_006930 6500 Hs.171626 NM_006930 ENSG00000113558 SKP1 EMC19|OCP-II|OCP2|SKP1A|TCEB1L|p19A S-phase kinase associated protein 1 protein-coding chr7-1415 chr7 130996705 130996949 + 19.1 0.000 intron (NR_109855, intron 2 of 4) Charlie15b|DNA|hAT-Charlie 83363 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr4-933 chr4 22385620 22385864 + 19.1 0.000 Intergenic MIR3|SINE|MIR -46076 NR_037877 100505912 Hs.270471 NR_037877 LOC100505912 - uncharacterized LOC100505912 ncRNA chr2-1704 chr2 54860447 54860691 + 19.1 0.000 intron (NM_001039753, intron 11 of 40) L1M3de|LINE|L1 135557 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding chr1-2108 chr1 204384903 204385147 + 19.1 0.000 Intergenic Intergenic -15306 NR_027022 127841 Hs.213144 NR_027022 ENSG00000280924 LINC00628 - long intergenic non-protein coding RNA 628 ncRNA chr9-588 chr9 18543686 18543930 + 19.1 0.000 intron (NM_052866, intron 3 of 12) intron (NM_052866, intron 3 of 12) -29498 NR_036107 100422869 NR_036107 ENSG00000264638 MIR3152 - microRNA 3152 ncRNA chr3-1395 chr3 126446994 126447238 + 19.1 0.000 intron (NR_104249, intron 6 of 8) intron (NR_104249, intron 6 of 8) 28775 NR_104249 79364 Hs.440049 NM_025112 ENSG00000070476 ZXDC ZXDL ZXD family zinc finger C protein-coding chr3-1463 chr3 168598419 168598663 + 19.1 0.000 intron (NR_021485, intron 4 of 15) intron (NR_021485, intron 4 of 15) 46687 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA chr6-863 chr6 148566274 148566518 + 19.1 0.000 Intergenic Intergenic 57245 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-2331 chr1 33324823 33325067 + 19.1 0.000 exon (NM_004427, exon 7 of 7) exon (NM_004427, exon 7 of 7) -3847 NM_001080438 127550 NM_001080438 ENSG00000184389 A3GALT2 A3GALT2P|IGB3S|IGBS3S alpha 1,3-galactosyltransferase 2 protein-coding KI270750.1-1 KI270750.1 5933 6177 + 19.1 0.000 NA NA NA NA chr21-54 chr21 29019123 29019367 + 19.1 0.000 exon (NM_016940, exon 1 of 5) exon (NM_016940, exon 1 of 5) 104 NM_016940 10069 Hs.713123 NM_016940 ENSG00000156253 RWDD2B C21orf6|GL011 RWD domain containing 2B protein-coding chr19-1259 chr19 44500601 44500845 + 19.1 0.000 promoter-TSS (NM_001288762) promoter-TSS (NM_001288762) -201 NM_001288761 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding chr2-1856 chr2 162732441 162732685 + 19.1 0.000 intron (NM_033272, intron 2 of 15) MIRb|SINE|MIR -36373 NR_110258 101929570 Hs.470445 NR_110258 ENSG00000237750 LOC101929570 - uncharacterized LOC101929570 ncRNA chr19-1452 chr19 3610320 3610564 + 19.1 0.000 TTS (NM_021231) TTS (NM_021231) 3195 NR_038865 404665 Hs.719726 NM_001012712 ENSG00000226800 CACTIN-AS1 C19orf29-AS1|C19orf29OS CACTIN antisense RNA 1 ncRNA chr9-757 chr9 137449866 137450110 + 19.1 0.000 promoter-TSS (NR_106964) promoter-TSS (NR_106964) 98 NR_106964 102466223 NR_106964 ENSG00000284317 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr9-1154 chr9 137446507 137446751 + 19.1 0.000 TTS (NM_001178064) TTS (NM_001178064) 3457 NR_106964 102466223 NR_106964 ENSG00000284317 MIR7114 hsa-mir-7114 microRNA 7114 ncRNA chr2-272 chr2 138501568 138501812 + 19.1 0.000 promoter-TSS (NM_001001664) promoter-TSS (NM_001001664) -80 NM_001001664 339745 Hs.333297 NM_001001664 ENSG00000144228 SPOPL BTBD33 speckle type BTB/POZ protein like protein-coding chr14-139 chr14 100306454 100306698 + 19.1 0.000 promoter-TSS (NM_001291814) promoter-TSS (NM_001291814) -132 NM_001352820 123096 Hs.578109 NM_152333 ENSG00000197119 SLC25A29 C14orf69|CACL|ORNT3 solute carrier family 25 member 29 protein-coding chr6-832 chr6 100750629 100750873 + 18.9 0.000 intron (NM_006828, intron 10 of 41) intron (NM_006828, intron 10 of 41) 130578 NM_006828 10973 Hs.486031 NM_006828 ENSG00000112249 ASCC3 ASC1p200|HELIC1|RNAH activating signal cointegrator 1 complex subunit 3 protein-coding chr10-889 chr10 95247368 95247612 + 18.9 0.000 intron (NM_020992, intron 4 of 6) intron (NM_020992, intron 4 of 6) 43513 NM_020992 9124 Hs.368525 NM_020992 ENSG00000107438 PDLIM1 CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 PDZ and LIM domain 1 protein-coding chr7-1303 chr7 55641378 55641622 + 18.9 0.000 Intergenic L1M3f|LINE|L1 46532 NR_027340 360132 Hs.446691 NM_182827 ENSG00000176826 FKBP9P1 FKBP9L FKBP prolyl isomerase 9 pseudogene 1 pseudo chr11-1337 chr11 76784460 76784704 + 18.9 0.000 intron (NM_001318478, intron 1 of 1) CpG 434 NM_001318478 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding chr1-2578 chr1 183022401 183022645 + 18.9 0.000 promoter-TSS (NM_002293) promoter-TSS (NM_002293) -897 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr8-944 chr8 115649297 115649541 + 18.9 0.000 intron (NM_014112, intron 1 of 6) MIR|SINE|MIR 18594 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr22-683 chr22 37969330 37969574 + 18.9 0.000 TTS (NM_021974) TTS (NM_021974) 1889 NR_106878 102465492 NR_106878 ENSG00000284289 MIR6820 hsa-mir-6820 microRNA 6820 ncRNA chr4-829 chr4 96736553 96736797 + 18.9 0.000 intron (NR_147149, intron 3 of 3) L1MEc|LINE|L1 425972 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr1-1239 chr1 1166857 1167101 + 18.9 0.000 promoter-TSS (NR_029834) promoter-TSS (NR_029834) -125 NR_029639 406984 NR_029639 ENSG00000207730 MIR200B MIRN200B|mir-200b microRNA 200b ncRNA chr2-1849 chr2 153054157 153054401 + 18.9 0.000 Intergenic MamGypLTR2c|LTR|Gypsy 335642 NR_146431 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr8-266 chr8 88328512 88328756 + 18.9 0.000 Intergenic Intergenic -1151 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding chr9-823 chr9 133612799 133613043 + 18.9 0.000 Intergenic L3|LINE|CR1 -23442 NM_000787 1621 Hs.591890 NM_000787 ENSG00000123454 DBH DBM|ORTHYP1 dopamine beta-hydroxylase protein-coding chr12-1111 chr12 52139801 52140045 + 18.9 0.000 Intergenic Intergenic 46354 NR_120440 26628 Hs.524431 NR_120438 ENSG00000257542 OR7E47P OR7E141 olfactory receptor family 7 subfamily E member 47 pseudogene pseudo chr2-1091 chr2 61193635 61193879 + 18.9 0.000 intron (NM_014709, intron 75 of 79) intron (NM_014709, intron 75 of 79) 16339 NR_152211 130872 Hs.655602 NM_152392 ENSG00000173209 AHSA2P AHA1|AHSA2|Hch1 activator of HSP90 ATPase homolog 2, pseudogene pseudo chr12-552 chr12 124434046 124434290 + 18.9 0.000 intron (NM_001077261, intron 10 of 47) intron (NM_001077261, intron 10 of 47) -96926 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr2-1435 chr2 9336889 9337133 + 18.9 0.000 intron (NM_003887, intron 9 of 27) intron (NM_003887, intron 9 of 27) 85580 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr3-1125 chr3 57951484 57951728 + 18.9 0.000 Intergenic Intergenic -56816 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr2-941 chr2 47335116 47335360 + 18.9 0.000 promoter-TSS (NR_001568) promoter-TSS (NR_001568) -77 NR_001568 618 NR_001568 ENSG00000236824 BCYRN1 BC200|BC200a|LINC00004|NCRNA00004 brain cytoplasmic RNA 1 ncRNA chr4-397 chr4 8473162 8473406 + 18.9 0.000 intron (NM_152544, intron 10 of 10) intron (NM_152544, intron 10 of 10) 32487 NM_001350233 152992 Hs.566191 NM_024950 ENSG00000155275 TRMT44 C4orf23|METTL19|TRM44 tRNA methyltransferase 44 homolog protein-coding chr19-928 chr19 4909890 4910134 + 18.9 0.000 promoter-TSS (NM_013282) promoter-TSS (NM_013282) -132 NM_001290051 29128 Hs.108106 NM_013282 ENSG00000276043 UHRF1 ICBP90|Np95|RNF106|TDRD22|hNP95|hUHRF1|huNp95 ubiquitin like with PHD and ring finger domains 1 protein-coding chr16-528 chr16 50266478 50266722 + 18.9 0.000 promoter-TSS (NM_001286057) promoter-TSS (NM_001286057) 49 NM_001286057 113 Hs.513578 NM_001114 ENSG00000121281 ADCY7 AC7 adenylate cyclase 7 protein-coding chr5-717 chr5 5018085 5018329 + 18.9 0.000 Intergenic L3b|LINE|CR1 -16152 NR_026994 340094 Hs.665092 NR_026994 ENSG00000215231 LINC01020 - long intergenic non-protein coding RNA 1020 ncRNA chr6-63 chr6 54054234 54054478 + 18.9 0.000 intron (NM_001281746, intron 1 of 11) intron (NM_001281746, intron 1 of 11) -6762 NR_046710 100873951 NR_046710 MLIP-AS1 - MLIP antisense RNA 1 ncRNA chr8-148 chr8 145052320 145052564 + 18.9 0.000 promoter-TSS (NM_023080) promoter-TSS (NM_023080) -25 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding chr7-339 chr7 2232758 2233002 + 18.9 0.000 promoter-TSS (NM_001013836) promoter-TSS (NM_001013836) 65 NM_003550 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr8-887 chr8 68150661 68150905 + 18.9 0.000 intron (NM_024870, intron 34 of 39) MLT1C|LTR|ERVL-MaLR -179590 NR_146187 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr14-519 chr14 43740322 43740566 + 18.9 0.000 Intergenic Intergenic 766839 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding chr10-323 chr10 72354881 72355125 + 18.9 0.000 promoter-TSS (NM_017626) promoter-TSS (NM_017626) -84 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr12-1264 chr12 124432263 124432507 + 18.9 0.000 intron (NM_001077261, intron 10 of 47) intron (NM_001077261, intron 10 of 47) -95143 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr19-1496 chr19 8364147 8364391 + 18.9 0.000 non-coding (NR_104213, exon 1 of 3) non-coding (NR_104213, exon 1 of 3) 114 NM_139314 51129 Hs.9613 NM_016109 ENSG00000167772 ANGPTL4 ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158 angiopoietin like 4 protein-coding chr19-1576 chr19 33207496 33207740 + 18.9 0.000 3' UTR (NM_002333, exon 7 of 7) 3' UTR (NM_002333, exon 7 of 7) 13288 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr7-1042 chr7 148540384 148540628 + 18.9 0.000 Intergenic Intergenic -50260 NM_145304 202865 Hs.352212 NM_145304 ENSG00000170279 C7orf33 - chromosome 7 open reading frame 33 protein-coding chr4-360 chr4 187811014 187811258 + 18.9 0.000 Intergenic AluSq2|SINE|Alu -138495 NR_110436 100506272 Hs.508163 NR_110436 ENSG00000250590 LINC02492 - long intergenic non-protein coding RNA 2492 ncRNA chr3-850 chr3 94226158 94226402 + 18.9 0.000 Intergenic Intergenic 163219 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding chr3-1159 chr3 134930765 134931009 + 18.9 0.000 intron (NM_004441, intron 2 of 15) L2b|LINE|L2 135627 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding chr11-289 chr11 122655668 122655912 + 18.9 0.000 promoter-TSS (NM_032873) promoter-TSS (NM_032873) 68 NM_001363365 84959 Hs.444075 NM_032873 ENSG00000154127 UBASH3B STS-1|STS1|TULA-2|TULA2|p70 ubiquitin associated and SH3 domain containing B protein-coding chr17-728 chr17 83113684 83113928 + 18.9 0.000 Intergenic Intergenic 32660 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding chr10-72 chr10 127797410 127797654 + 18.9 0.000 Intergenic Intergenic 60347 NM_207426 399823 Hs.449674 NM_207426 ENSG00000186766 FOXI2 - forkhead box I2 protein-coding chr3-405 chr3 113249108 113249352 + 18.9 0.000 intron (NM_001301861, intron 2 of 19) intron (NM_001301861, intron 2 of 19) 37114 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding chr1-793 chr1 231626525 231626769 + 18.9 0.000 promoter-TSS (NM_001164540) promoter-TSS (NM_001164540) -143 NM_018662 27185 Hs.13318 NM_018662 ENSG00000162946 DISC1 C1orf136|SCZD9 DISC1 scaffold protein protein-coding chr1-1429 chr1 202160327 202160571 + 18.9 0.000 promoter-TSS (NM_080588) promoter-TSS (NM_080588) -458 NM_080588 5778 Hs.402773 NM_002832 ENSG00000143851 PTPN7 BPTP-4|HEPTP|LC-PTP|LPTP|PTPNI protein tyrosine phosphatase non-receptor type 7 protein-coding chr5-631 chr5 154287226 154287470 + 18.9 0.000 intron (NM_198321, intron 1 of 11) L2c|LINE|L2 -59758 NR_031626 100302181 NR_031626 ENSG00000221430 MIR1294 MIRN1294|hsa-mir-1294|mir-1294 microRNA 1294 ncRNA chr7-841 chr7 66700083 66700327 + 18.9 0.000 intron (NM_001367745, intron 1 of 7) intron (NM_001367745, intron 1 of 7) 18039 NM_001367745 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr6-1110 chr6 157144480 157144724 + 18.9 0.000 intron (NM_020732, intron 8 of 19) (GGA)n|Simple_repeat|Simple_repeat 108175 NM_001363725 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr7-409 chr7 1476382 1476626 + 18.9 0.000 intron (NM_001080453, intron 37 of 47) CpG -17034 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr4-1051 chr4 118835074 118835318 + 18.9 0.000 intron (NM_014822, intron 1 of 22) intron (NM_014822, intron 1 of 22) 930 NM_001318066 9871 Hs.189641 NM_014822 ENSG00000150961 SEC24D CLCRP2 SEC24 homolog D, COPII coat complex component protein-coding chr12-716 chr12 132551848 132552092 + 18.9 0.000 intron (NM_001142641, intron 5 of 16) intron (NM_001142641, intron 5 of 16) -30027 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr19-1292 chr19 52094676 52094920 + 18.9 0.000 promoter-TSS (NM_001352299) promoter-TSS (NM_001352299) -527 NM_001369825 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding chr3-932 chr3 25354227 25354471 + 18.9 0.000 intron (NM_001290300, intron 1 of 7) intron (NM_001290300, intron 1 of 7) 13547 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr11-881 chr11 45804942 45805186 + 18.9 0.000 promoter-TSS (NM_018389) promoter-TSS (NM_018389) -26 NM_018389 55343 Hs.12211 NM_018389 ENSG00000181830 SLC35C1 CDG2C|FUCT1 solute carrier family 35 member C1 protein-coding chr10-817 chr10 34723901 34724145 + 18.9 0.000 intron (NM_001184789, intron 1 of 22) intron (NM_001184789, intron 1 of 22) 91273 NM_019619 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr11-1570 chr11 70457079 70457323 + 18.9 0.000 Intergenic SVA_A|Retroposon|SVA 58672 NM_005231 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding chr16-1146 chr16 66910777 66911021 + 18.9 0.000 intron (NM_004062, intron 14 of 17) intron (NM_004062, intron 14 of 17) 7986 NM_001204745 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr16-349 chr16 89620699 89620943 + 18.9 0.000 intron (NM_004413, intron 1 of 10) intron (NM_004413, intron 1 of 10) 224 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr20-465 chr20 2151886 2152130 + 18.9 0.000 Intergenic Intergenic 50181 NM_080836 140901 Hs.100057 NM_080836 ENSG00000125834 STK35 CLIK1|STK35L1 serine/threonine kinase 35 protein-coding chr3-1374 chr3 111591970 111592214 + 18.9 0.000 TTS (NM_024508) TTS (NM_024508) 3254 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding chr16-729 chr16 63988093 63988337 + 18.9 0.000 Intergenic Intergenic 1133848 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr12-916 chr12 124774683 124774927 + 18.9 0.000 Intergenic L1ME1|LINE|L1 64866 NM_001367982 949 Hs.731377 NM_005505 ENSG00000073060 SCARB1 CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 scavenger receptor class B member 1 protein-coding chr10-707 chr10 133141977 133142221 + 18.9 0.000 Intergenic CpG -18120 NM_001347866 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr3-244 chr3 9947149 9947393 + 18.9 0.000 promoter-TSS (NR_046734) promoter-TSS (NR_046734) -133 NR_046734 100874032 Hs.616388 NR_046734 ENSG00000230082 PRRT3-AS1 - PRRT3 antisense RNA 1 ncRNA chr2-1654 chr2 29165613 29165857 + 18.9 0.000 intron (NM_001287528, intron 13 of 14) intron (NM_001287528, intron 13 of 14) 50320 NM_024692 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chrX-440 chrX 40262876 40263120 + 18.9 0.000 promoter-TSS (NR_110386) promoter-TSS (NR_110386) 81 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr12-1099 chr12 49436294 49436538 + 18.9 0.000 intron (NM_001293285, intron 3 of 14) SVA_D|Retroposon|SVA 47242 NR_033267 100335030 Hs.687044 NR_033267 LOC100335030 - FGFR1 oncogene partner 2 pseudogene pseudo chr16-775 chr16 1324400 1324644 + 18.9 0.000 intron (NM_194261, intron 6 of 6) intron (NM_194261, intron 6 of 6) -9123 NM_001199098 8938 Hs.458427 NM_003933 ENSG00000007516 BAIAP3 BAP3 BAI1 associated protein 3 protein-coding chr2-844 chr2 64990716 64990960 + 18.9 0.000 intron (NM_003038, intron 1 of 7) intron (NM_003038, intron 1 of 7) 1439 NM_003038 6509 Hs.654352 NM_003038 ENSG00000115902 SLC1A4 ASCT1|SATT|SPATCCM solute carrier family 1 member 4 protein-coding chr11-1070 chr11 16935878 16936122 + 18.9 0.000 intron (NM_001329630, intron 3 of 26) intron (NM_001329630, intron 3 of 26) -9978 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA chr19-712 chr19 48868540 48868784 + 18.9 0.000 promoter-TSS (NM_001161354) promoter-TSS (NM_001161354) -45 NM_020904 57664 Hs.9469 NM_020904 ENSG00000105559 PLEKHA4 PEPP1 pleckstrin homology domain containing A4 protein-coding chr8-882 chr8 63391462 63391706 + 18.9 0.000 Intergenic Intergenic -74265 NR_125825 102724612 Hs.97639 NR_125825 ENSG00000253894 LOC102724612 - uncharacterized LOC102724612 ncRNA chr10-797 chr10 19654623 19654867 + 18.9 0.000 intron (NM_001142308, intron 36 of 39) intron (NM_001142308, intron 36 of 39) 73805 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA chr3-775 chr3 134315624 134315868 + 18.9 0.000 intron (NR_146711, intron 1 of 1) intron (NR_146711, intron 1 of 1) 2170 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr2-693 chr2 131093148 131093392 + 18.9 0.000 promoter-TSS (NM_001321747) promoter-TSS (NM_001321747) -108 NM_001321747 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chr9-906 chr9 87343893 87344137 + 18.9 0.000 Intergenic Intergenic -153213 NM_001288731 1612 Hs.380277 NM_004938 ENSG00000196730 DAPK1 DAPK|ROCO3 death associated protein kinase 1 protein-coding chr2-670 chr2 42493956 42494200 + 18.9 0.000 promoter-TSS (NM_001282755) promoter-TSS (NM_001282755) -96 NM_133329 170850 Hs.352633 NM_133329 ENSG00000171126 KCNG3 KV10.1|KV6.3 potassium voltage-gated channel modifier subfamily G member 3 protein-coding chr16-297 chr16 2970012 2970256 + 18.9 0.000 intron (NM_001284512, intron 1 of 1) CpG-9143 786 NM_001284512 124222 Hs.351474 NM_152341 ENSG00000162073 PAQR4 - progestin and adipoQ receptor family member 4 protein-coding chr2-1950 chr2 224886159 224886403 + 18.9 0.000 intron (NM_001290263, intron 5 of 55) intron (NM_001290263, intron 5 of 55) 60768 NM_001290263 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding chrX-64 chrX 74536433 74536677 + 18.9 0.000 Intergenic CpG 78069 NM_183353 51132 Hs.653288 NM_016120 ENSG00000131263 RLIM MRX61|NY-REN-43|RNF12|TOKAS ring finger protein, LIM domain interacting protein-coding chr15-265 chr15 72475174 72475418 + 18.9 0.000 intron (NM_005744, intron 1 of 13) CpG 966 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr1-2324 chr1 32349249 32349493 + 18.9 0.000 Intergenic Intergenic 12872 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr16-1165 chr16 69921200 69921444 + 18.9 0.000 intron (NM_001270453, intron 7 of 20) intron (NM_001270453, intron 7 of 20) -3717 NM_199424 11060 Hs.408458 NM_007014 ENSG00000198373 WWP2 AIP2|WWp2-like WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr1-1947 chr1 234609224 234609468 + 18.9 0.000 exon (NM_182972, exon 1 of 2) exon (NM_182972, exon 1 of 2) 179 NM_001077397 359948 Hs.350268 NM_182972 ENSG00000168264 IRF2BP2 CVID14 interferon regulatory factor 2 binding protein 2 protein-coding chr1-2407 chr1 66354432 66354676 + 18.9 0.000 promoter-TSS (NM_001297442) promoter-TSS (NM_001297442) 19 NM_001297442 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr22-710 chr22 42519568 42519812 + 18.9 0.000 intron (NM_015703, intron 1 of 6) CpG 106 NM_015703 27341 Hs.745006 NM_015703 ENSG00000189306 RRP7A BK126B4.3|CGI-96|Rrp7 ribosomal RNA processing 7 homolog A protein-coding chr12-429 chr12 90682392 90682636 + 18.9 0.000 Intergenic Intergenic -235509 NR_038868 439916 Hs.350600 NM_001039384 ENSG00000196243 LINC00615 C12orf37 long intergenic non-protein coding RNA 615 ncRNA chr3-377 chr3 138834759 138835003 + 18.9 0.000 promoter-TSS (NM_006219) promoter-TSS (NM_006219) 47 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr11-421 chr11 45665814 45666058 + 18.9 0.000 promoter-TSS (NM_003654) promoter-TSS (NM_003654) -314 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr1-1041 chr1 66752191 66752435 + 18.9 0.000 promoter-TSS (NM_152665) promoter-TSS (NM_152665) -146 NM_152665 200132 Hs.479226 NM_152665 ENSG00000152760 TCTEX1D1 - Tctex1 domain containing 1 protein-coding chr2-1050 chr2 237486996 237487240 + 18.9 0.000 promoter-TSS (NM_001042467) promoter-TSS (NM_001042467) -133 NM_001042467 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr7-1125 chr7 83219361 83219605 + 18.9 0.000 Intergenic THE1A-int|LTR|ERVL-MaLR -56599 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr11-457 chr11 36509962 36510206 + 18.9 0.000 5' UTR (NM_004620, exon 1 of 7) 5' UTR (NM_004620, exon 1 of 7) 188 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr18-166 chr18 58590331 58590575 + 18.9 0.000 intron (NM_052947, intron 3 of 12) intron (NM_052947, intron 3 of 12) -10167 NR_132963 106635543 NR_132963 SNORA108 - small nucleolar RNA, H/ACA box 108 snoRNA chr3-1027 chr3 137134354 137134598 + 18.9 0.000 Intergenic Intergenic 176493 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr12-594 chr12 114673245 114673489 + 18.9 0.000 intron (NM_016569, intron 7 of 7) intron (NM_016569, intron 7 of 7) 10808 NM_005996 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr2-830 chr2 28402381 28402625 + 18.9 0.000 intron (NM_005253, intron 1 of 3) intron (NM_005253, intron 1 of 3) -7831 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr1-2594 chr1 198220512 198220756 + 18.9 0.000 intron (NM_133494, intron 1 of 9) intron (NM_133494, intron 1 of 9) 63636 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding chr11-1191 chr11 83523086 83523330 + 18.9 0.000 intron (NM_001142699, intron 21 of 27) intron (NM_001142699, intron 21 of 27) 159217 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-655 chr17 76527657 76527901 + 18.9 0.000 non-coding (NR_033357, exon 1 of 5) non-coding (NR_033357, exon 1 of 5) 193 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr15-195 chr15 99733406 99733650 + 18.9 0.000 promoter-TSS (NM_001284417) promoter-TSS (NM_001284417) -84 NM_001284420 145748 Hs.562568 NM_152449 ENSG00000183060 LYSMD4 - LysM domain containing 4 protein-coding chr22-111 chr22 42500382 42500626 + 18.9 0.000 promoter-TSS (NR_027786) promoter-TSS (NR_027786) -75 NR_027786 94009 Hs.360940 NM_170694 ENSG00000172250 SERHL BK126B4.1|BK126B4.2|HS126B42|dJ222E13.1 serine hydrolase like (pseudogene) pseudo chr5-1094 chr5 124194181 124194425 + 18.9 0.000 intron (NR_125774, intron 4 of 5) X6B_LINE|LINE|CR1 244217 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr6-747 chr6 150813723 150813967 + 18.9 0.000 intron (NM_001329803, intron 8 of 13) L2|LINE|L2 -51834 NM_001242767 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-1457 chr2 39723857 39724101 + 18.9 0.000 Intergenic Intergenic 55279 NM_025264 80745 Hs.468254 NM_025264 ENSG00000138050 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding chr7-797 chr7 151046182 151046426 + 18.9 0.000 3' UTR (NM_007188, exon 16 of 16) 3' UTR (NM_007188, exon 16 of 16) -1988 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr20-547 chr20 20187070 20187314 + 18.9 0.000 intron (NM_015585, intron 13 of 26) MER45C|DNA|hAT-Tip100 130546 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr6-819 chr6 72937241 72937485 + 18.9 0.000 intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 30390 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA chr9-865 chr9 25716326 25716570 + 18.9 0.000 Intergenic LTR50|LTR|ERVL -37590 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr6-343 chr6 11537504 11537748 + 18.9 0.000 promoter-TSS (NM_001100829) promoter-TSS (NM_001100829) -123 NM_001100829 100113407 Hs.146317 NM_001100829 ENSG00000205269 TMEM170B - transmembrane protein 170B protein-coding chr8-207 chr8 26045356 26045600 + 18.9 0.000 promoter-TSS (NM_022659) promoter-TSS (NM_022659) -65 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr8-869 chr8 50828951 50829195 + 18.9 0.000 Intergenic L1MB7|LINE|L1 664942 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding chr16-881 chr16 87127304 87127548 + 18.9 0.000 Intergenic Intergenic 69642 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA chr1-2337 chr1 36133668 36133912 + 18.9 0.000 Intergenic Intergenic -8568 NM_005202 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr3-297 chr3 197002685 197002929 + 18.9 0.000 promoter-TSS (NR_038285) promoter-TSS (NR_038285) -99 NR_038285 100507057 Hs.666451 NR_038285 ENSG00000228109 MELTF-AS1 MFI2-AS1 MELTF antisense RNA 1 ncRNA chr13-222 chr13 101452525 101452769 + 18.9 0.000 promoter-TSS (NM_004791) promoter-TSS (NM_004791) -28 NM_004791 9358 Hs.696554 NM_004791 ENSG00000198542 ITGBL1 OSCP|TIED integrin subunit beta like 1 protein-coding chr8-685 chr8 130258953 130259197 + 18.9 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 37458 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr9-1096 chr9 107283661 107283905 + 18.9 0.000 promoter-TSS (NM_001244713) promoter-TSS (NM_001244713) -270 NM_001244724 5887 Hs.521640 NM_002874 ENSG00000119318 RAD23B HHR23B|HR23B|P58 RAD23 homolog B, nucleotide excision repair protein protein-coding chr11-1369 chr11 127722461 127722705 + 18.9 0.000 Intergenic L2|LINE|L2 451513 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA chr9-1131 chr9 131289770 131290014 + 18.9 0.000 5' UTR (NM_032728, exon 1 of 2) 5' UTR (NM_032728, exon 1 of 2) 169 NM_032728 84814 Hs.134292 NM_032728 ENSG00000160539 PLPP7 C9orf67|NET39|PPAPDC3 phospholipid phosphatase 7 (inactive) protein-coding chrX-247 chrX 46912171 46912415 + 18.9 0.000 promoter-TSS (NM_014735) promoter-TSS (NM_014735) 17 NM_001077445 9767 Hs.371977 NM_014735 ENSG00000102221 JADE3 JADE-3|PHF16 jade family PHD finger 3 protein-coding chr2-1984 chr2 237714951 237715195 + 18.9 0.000 intron (NM_001137550, intron 3 of 23) intron (NM_001137550, intron 3 of 23) 22868 NM_001137552 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr3-1180 chr3 178320318 178320562 + 18.9 0.000 Intergenic Intergenic -98761 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA chr15-702 chr15 77667125 77667369 + 18.9 0.000 intron (NR_120362, intron 2 of 2) intron (NR_120362, intron 2 of 2) 7196 NR_120362 101929478 Hs.569510 NR_120361 ENSG00000259281 LINGO1-AS2 - LINGO1 antisense RNA 2 ncRNA chr8-981 chr8 140119396 140119640 + 18.9 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -18983 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr8-516 chr8 99860114 99860358 + 18.9 0.000 intron (NM_017890, intron 57 of 61) intron (NM_017890, intron 57 of 61) 33471 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chr13-128 chr13 113802161 113802405 + 18.9 0.000 intron (NM_001348663, intron 7 of 7) intron (NM_001348663, intron 7 of 7) -13327 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr3-556 chr3 11719036 11719280 + 18.9 0.000 intron (NM_014667, intron 1 of 5) intron (NM_014667, intron 1 of 5) 1381 NM_001284390 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr11-651 chr11 2741434 2741678 + 18.9 0.000 intron (NM_181798, intron 11 of 15) intron (NM_181798, intron 11 of 15) -41558 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr12-1279 chr12 127485683 127485927 + 18.9 0.000 Intergenic HERVE-int|LTR|ERV1 -145733 NR_110057 101927616 Hs.637827 NR_110057 ENSG00000256362 LINC02375 - long intergenic non-protein coding RNA 2375 ncRNA chr6-644 chr6 2504216 2504460 + 18.9 0.000 Intergenic Intergenic -130162 NR_149118 105374885 NR_149118 LINC02521 - long intergenic non-protein coding RNA 2521 ncRNA chr19-924 chr19 4442292 4442536 + 18.9 0.000 intron (NM_005483, intron 14 of 14) intron (NM_005483, intron 14 of 14) -3564 NR_039901 100616371 NR_039901 ENSG00000266437 MIR4746 mir-4746 microRNA 4746 ncRNA chr19-589 chr19 13764360 13764604 + 18.7 0.000 promoter-TSS (NM_032285) promoter-TSS (NM_032285) -40 NM_001031727 84245 Hs.439370 NM_032285 ENSG00000037757 MRI1 M1Pi|MRDI|MTNA|Ypr118w methylthioribose-1-phosphate isomerase 1 protein-coding chr3-741 chr3 61904151 61904395 + 18.7 0.000 intron (NM_002841, intron 2 of 29) intron (NM_002841, intron 2 of 29) 342702 NM_002841 5793 Hs.595541 NM_002841 ENSG00000144724 PTPRG HPTPG|PTPG|R-PTP-GAMMA|RPTPG protein tyrosine phosphatase receptor type G protein-coding chr15-351 chr15 40430269 40430513 + 18.7 0.000 intron (NR_148925, intron 13 of 13) L2b|LINE|L2 -9366 NM_001301132 22893 Hs.22109 NM_014952 ENSG00000140320 BAHD1 - bromo adjacent homology domain containing 1 protein-coding chr12-1117 chr12 53190206 53190450 + 18.7 0.000 TTS (NM_000889) TTS (NM_000889) -9403 NM_001244705 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr18-78 chr18 68714930 68715174 + 18.7 0.000 promoter-TSS (NM_001350516) promoter-TSS (NM_001350516) 56 NM_019022 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding chr19-1272 chr19 46620955 46621199 + 18.7 0.000 3' UTR (NM_000960, exon 3 of 3) 3' UTR (NM_000960, exon 3 of 3) 4012 NM_000960 5739 Hs.458324 NM_000960 ENSG00000160013 PTGIR IP|PRIPR prostaglandin I2 receptor protein-coding chr22-305 chr22 36156972 36157216 + 18.7 0.000 intron (NM_030644, intron 1 of 4) MamRep564|Unknown|Unknown 3661 NM_014349 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding chr22-631 chr22 24289702 24289946 + 18.7 0.000 intron (NM_015330, intron 2 of 16) intron (NM_015330, intron 2 of 16) 18993 NM_015330 23384 Hs.474384 NM_015330 ENSG00000100014 SPECC1L CYTSA|GBBB2|OBLFC1|TBHS sperm antigen with calponin homology and coiled-coil domains 1 like protein-coding chr9-795 chr9 108467993 108468237 + 18.7 0.000 Intergenic Intergenic 387871 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding chr10-1311 chr10 124320436 124320680 + 18.7 0.000 Intergenic Intergenic 98365 NM_001322965 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr7-584 chr7 100559875 100560119 + 18.7 0.000 intron (NM_006076, intron 6 of 11) intron (NM_006076, intron 6 of 11) 13903 NM_001348680 100316904 Hs.633863 NM_001168682 ENSG00000205307 SAP25 - Sin3A associated protein 25 protein-coding chr7-997 chr7 100790886 100791130 + 18.7 0.000 exon (NM_173059, exon 40 of 46) exon (NM_173059, exon 40 of 46) -35861 NM_001363494 56996 Hs.521087 NM_020246 ENSG00000146828 SLC12A9 CCC6|CIP1|WO3.3|hCCC6 solute carrier family 12 member 9 protein-coding chr7-1218 chr7 6486969 6487213 + 18.7 0.000 Intergenic MER45C|DNA|hAT-Tip100 -2939 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr16-896 chr16 88878205 88878449 + 18.7 0.000 intron (NM_175931, intron 10 of 10) intron (NM_175931, intron 10 of 10) -5188 NR_135194 101927793 Hs.690953 NR_135194 ENSG00000259881 LOC101927793 - uncharacterized LOC101927793 ncRNA chr14-570 chr14 89330188 89330432 + 18.7 0.000 intron (NM_001085471, intron 3 of 6) intron (NM_001085471, intron 3 of 6) 86923 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chrX-478 chrX 68140123 68140367 + 18.7 0.000 intron (NM_002547, intron 15 of 24) intron (NM_002547, intron 15 of 24) 293250 NM_002547 4983 Hs.128824 NM_002547 ENSG00000079482 OPHN1 ARHGAP41|MRX60|OPN1 oligophrenin 1 protein-coding chr9-635 chr9 10151230 10151474 + 18.7 0.000 intron (NM_002839, intron 3 of 45) AluSg|SINE|Alu 351960 NR_135135 105375972 Hs.738242 NR_135135 ENSG00000230920 LOC105375972 - uncharacterized LOC105375972 ncRNA chr7-1163 chr7 151488692 151488936 + 18.7 0.000 intron (NM_005614, intron 2 of 7) intron (NM_005614, intron 2 of 7) 31081 NM_005614 6009 Hs.283521 NM_005614 ENSG00000106615 RHEB RHEB2 Ras homolog, mTORC1 binding protein-coding chr10-479 chr10 113126577 113126821 + 18.7 0.000 promoter-TSS (NM_001349871) promoter-TSS (NM_001349871) 66 NM_001349871 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr1-1058 chr1 98512508 98512752 + 18.7 0.000 Intergenic SVA_D|Retroposon|SVA -149091 NR_033716 51375 Hs.197015 NM_015976 ENSG00000162627 SNX7 - sorting nexin 7 protein-coding chr4-169 chr4 39698059 39698303 + 18.7 0.000 promoter-TSS (NM_001111113) promoter-TSS (NM_001111113) 45 NM_005339 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr4-596 chr4 56434871 56435115 + 18.7 0.000 promoter-TSS (NM_006452) promoter-TSS (NM_006452) 622 NM_002703 5471 Hs.331420 NM_002703 ENSG00000128059 PPAT ATASE|GPAT|PRAT phosphoribosyl pyrophosphate amidotransferase protein-coding chr1-786 chr1 201982603 201982847 + 18.7 0.000 promoter-TSS (NM_001319184) promoter-TSS (NM_001319184) 77 NM_001319184 6051 Hs.497391 NM_020216 ENSG00000176393 RNPEP AP-B|APB arginyl aminopeptidase protein-coding chr9-1228 chr9 79027989 79028233 + 18.7 0.000 Intergenic Intergenic 117555 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA chr16-413 chr16 1095164 1095408 + 18.7 0.000 intron (NM_207419, intron 2 of 4) intron (NM_207419, intron 2 of 4) 958 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr10-898 chr10 99846072 99846316 + 18.7 0.000 intron (NM_000392, intron 29 of 31) intron (NM_000392, intron 29 of 31) 63554 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr3-739 chr3 58585325 58585569 + 18.7 0.000 intron (NM_001282714, intron 2 of 4) intron (NM_001282714, intron 2 of 4) 1567 NM_001282713 11170 Hs.506357 NM_007177 ENSG00000168309 FAM107A DRR1|TU3A family with sequence similarity 107 member A protein-coding chr3-251 chr3 50155006 50155250 + 18.7 0.000 promoter-TSS (NM_004186) promoter-TSS (NM_004186) 70 NM_001318798 6405 Hs.32981 NM_004186 ENSG00000001617 SEMA3F SEMA-IV|SEMA4|SEMAK semaphorin 3F protein-coding chr12-1080 chr12 40627620 40627864 + 18.7 0.000 Intergenic Intergenic -64697 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding chr14-248 chr14 105170952 105171196 + 18.7 0.000 Intergenic Intergenic -2298 NM_145159 3714 Hs.433445 NM_002226 ENSG00000184916 JAG2 HJ2|SER2 jagged canonical Notch ligand 2 protein-coding chr11-1445 chr11 33085891 33086135 + 18.7 0.000 intron (NM_001326, intron 18 of 20) intron (NM_001326, intron 18 of 20) 9863 NR_015451 283267 Hs.533701 NR_015451 ENSG00000280798 LINC00294 NCRNA00294 long intergenic non-protein coding RNA 294 ncRNA chr5-709 chr5 177303561 177303805 + 18.7 0.000 promoter-TSS (NM_013237) promoter-TSS (NM_013237) 36 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr4-1046 chr4 108763345 108763589 + 18.7 0.000 promoter-TSS (NM_001331033) promoter-TSS (NM_001331033) -414 NM_001331033 64850 Hs.106576 NM_031279 ENSG00000164089 ETNPPL AGXT2L1 ethanolamine-phosphate phospho-lyase protein-coding chr20-504 chr20 51197164 51197408 + 18.7 0.000 Intergenic MER5A1|DNA|hAT-Charlie -174179 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr1-1796 chr1 91732702 91732946 + 18.7 0.000 intron (NR_036634, intron 6 of 17) intron (NR_036634, intron 6 of 17) 153327 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr16-916 chr16 1348404 1348648 + 18.7 0.000 TTS (NM_001001410) TTS (NM_001001410) 3352 NM_001001410 115939 Hs.134846 NM_001001410 ENSG00000007520 TSR3 C16orf42 TSR3 ribosome maturation factor protein-coding chr7-961 chr7 66044062 66044306 + 18.7 0.000 Intergenic CpG -31635 NM_000048 435 Hs.632015 NM_000048 ENSG00000126522 ASL ASAL argininosuccinate lyase protein-coding chr1-1624 chr1 2169866 2170110 + 18.7 0.000 intron (NR_146911, intron 8 of 15) intron (NR_146911, intron 8 of 15) 13887 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr17-930 chr17 8173877 8174121 + 18.7 0.000 promoter-TSS (NR_033294) promoter-TSS (NR_033294) -411 NR_033294 727676 NR_033294 ENSG00000200463 SNORD118 LCC|U8 small nucleolar RNA, C/D box 118 snoRNA chr9-915 chr9 92738608 92738852 + 18.7 0.000 intron (NM_001003800, intron 1 of 6) intron (NM_001003800, intron 1 of 6) 26103 NM_015250 23299 Hs.436939 NM_015250 ENSG00000185963 BICD2 SMALED2|SMALED2A|SMALED2B|bA526D8.1 BICD cargo adaptor 2 protein-coding chr10-877 chr10 86968238 86968482 + 18.7 0.000 promoter-TSS (NM_006829) promoter-TSS (NM_006829) -122 NM_006829 10974 Hs.642660 NM_006829 ENSG00000148671 ADIRF AFRO|APM2|C10orf116|apM-2 adipogenesis regulatory factor protein-coding chr17-411 chr17 56809578 56809822 + 18.7 0.000 intron (NM_001085430, intron 6 of 7) (AC)n|Simple_repeat|Simple_repeat 24220 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr4-532 chr4 87423369 87423613 + 18.7 0.000 intron (NM_024047, intron 1 of 7) intron (NM_024047, intron 1 of 7) 894 NM_198038 53343 Hs.149500 NM_024047 ENSG00000170502 NUDT9 NUDT10 nudix hydrolase 9 protein-coding chr13-197 chr13 113860464 113860708 + 18.7 0.000 intron (NM_000820, intron 2 of 14) intron (NM_000820, intron 2 of 14) 3490 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chrX-403 chrX 150767576 150767820 + 18.7 0.000 3' UTR (NM_031462, exon 11 of 11) 3' UTR (NM_031462, exon 11 of 11) 55943 NM_001353995 8776 Hs.347187 NM_003828 ENSG00000063601 MTMR1 - myotubularin related protein 1 protein-coding chr10-1148 chr10 47225729 47225973 + 18.7 0.000 Intergenic Intergenic -74346 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr1-808 chr1 6770784 6771028 + 18.7 0.000 Intergenic Intergenic 14074 NR_149049 110841581 NR_149049 CAMTA1-DT lncCAMTA1 CAMTA1 divergent transcript ncRNA chr16-830 chr16 58497540 58497784 + 18.7 0.000 intron (NM_020465, intron 3 of 15) MIRb|SINE|MIR -2481 NM_001242836 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr20-433 chr20 44582494 44582738 + 18.7 0.000 promoter-TSS (NM_001281445) promoter-TSS (NM_001281445) 37 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding chr6-586 chr6 16318544 16318788 + 18.7 0.000 intron (NM_000332, intron 8 of 8) intron (NM_000332, intron 8 of 8) 80079 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr4-625 chr4 153538520 153538764 + 18.7 0.000 intron (NM_001131007, intron 3 of 34) intron (NM_001131007, intron 3 of 34) 72282 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr12-803 chr12 6924760 6925004 + 18.7 0.000 intron (NM_001007026, intron 1 of 9) intron (NM_001007026, intron 1 of 9) 423 NM_001007026 1822 Hs.143766 NM_001940 ENSG00000111676 ATN1 B37|D12S755E|DRPLA|HRS|NOD atrophin 1 protein-coding chr20-458 chr20 63403708 63403952 + 18.7 0.000 3' UTR (NM_172108, exon 16 of 16) 3' UTR (NM_172108, exon 16 of 16) -42434 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding chr7-954 chr7 51040929 51041173 + 18.7 0.000 intron (NM_015198, intron 8 of 12) intron (NM_015198, intron 8 of 12) -247598 NM_001001555 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr11-1329 chr11 70128345 70128589 + 18.7 0.000 intron (NM_018043, intron 10 of 25) intron (NM_018043, intron 10 of 25) 43057 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr20-292 chr20 33423267 33423511 + 18.7 0.000 intron (NM_003098, intron 2 of 7) intron (NM_003098, intron 2 of 7) 20503 NM_003098 6640 Hs.31121 NM_003098 ENSG00000101400 SNTA1 LQT12|SNT1|TACIP1|dJ1187J4.5 syntrophin alpha 1 protein-coding chr1-952 chr1 154813224 154813468 + 18.7 0.000 intron (NM_170782, intron 2 of 7) intron (NM_170782, intron 2 of 7) 46530 NM_170782 3782 Hs.490765 NM_002249 ENSG00000143603 KCNN3 KCa2.3|SK3|SKCA3|hSK3 potassium calcium-activated channel subfamily N member 3 protein-coding chr11-1338 chr11 83370665 83370909 + 18.7 0.000 Intergenic L1MC3|LINE|L1 -84380 NM_001286118 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr12-909 chr12 122773956 122774200 + 18.7 0.000 promoter-TSS (NM_201435) promoter-TSS (NM_201435) -494 NR_027918 84660 Hs.592008 NM_032573 ENSG00000130783 CCDC62 CT109|ERAP75|TSP-NY coiled-coil domain containing 62 protein-coding chr8-534 chr8 142950629 142950873 + 18.7 0.000 Intergenic MIR|SINE|MIR -32908 NM_000498 1585 Hs.632054 NM_000498 ENSG00000179142 CYP11B2 ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo cytochrome P450 family 11 subfamily B member 2 protein-coding chr10-340 chr10 113539825 113540069 + 18.7 0.000 Intergenic Intergenic -10884 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr10-1304 chr10 121754172 121754416 + 18.7 0.000 intron (NM_001001976, intron 11 of 11) L1MC4|LINE|L1 -155836 NM_000141 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr1-1690 chr1 25320401 25320645 + 18.7 0.000 intron (NR_135790, intron 1 of 2) intron (NR_135790, intron 1 of 2) 17731 NR_135787 57035 Hs.259412 NM_020317 ENSG00000117616 RSRP1 C1orf63|NPD014 arginine and serine rich protein 1 protein-coding chr5-1071 chr5 96844649 96844893 + 18.7 0.000 Intergenic Intergenic -30626 NM_001198541 51752 Hs.666524 NM_016442 ENSG00000164307 ERAP1 A-LAP|ALAP|APPILS|ARTS-1|ARTS1|ERAAP|ERAAP1|PILS-AP|PILSAP endoplasmic reticulum aminopeptidase 1 protein-coding chr12-1274 chr12 124919491 124919735 + 18.7 0.000 Intergenic LTR8|LTR|ERV1 4066 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr2-595 chr2 26438582 26438826 + 18.7 0.000 intron (NM_145038, intron 7 of 16) intron (NM_145038, intron 7 of 16) 36784 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr1-2281 chr1 21322890 21323134 + 18.7 0.000 intron (NM_001113348, intron 1 of 18) Charlie16a|DNA|hAT-Charlie 22492 NM_001113348 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr1-2104 chr1 202085965 202086209 + 18.7 0.000 Intergenic Intergenic -36830 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding chr12-1085 chr12 45425605 45425849 + 18.7 0.000 intron (NM_001142679, intron 19 of 19) L1MEd|LINE|L1 133037 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding chr19-1018 chr19 49928797 49929041 + 18.7 0.000 promoter-TSS (NM_001193646) promoter-TSS (NM_001193646) 217 NM_012068 22809 Hs.9754 NM_012068 ENSG00000169136 ATF5 ATFX|HMFN0395 activating transcription factor 5 protein-coding chrX-304 chrX 54401978 54402222 + 18.7 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -38275 NM_001346791 90121 Hs.522662 NM_058163 ENSG00000158526 TSR2 DBA14|DT1P1A10|WGG1 TSR2 ribosome maturation factor protein-coding chr11-1398 chr11 2438307 2438551 + 18.7 0.000 Intergenic AluJb|SINE|Alu -6562 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr16-1052 chr16 3582409 3582653 + 18.7 0.000 exon (NM_032444, exon 15 of 15) exon (NM_032444, exon 15 of 15) -5128 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding chr2-774 chr2 128304273 128304517 + 18.7 0.000 intron (NM_004807, intron 1 of 1) intron (NM_004807, intron 1 of 1) 14473 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chrX-216 chrX 110915129 110915373 + 18.7 0.000 Intergenic Intergenic -28990 NM_001128166 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding chr10-564 chr10 609928 610172 + 18.7 0.000 intron (NM_014974, intron 1 of 36) L1MA4|LINE|L1 -18514 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA chr17-648 chr17 73291666 73291910 + 18.7 0.000 intron (NM_012121, intron 1 of 1) intron (NM_012121, intron 1 of 1) 20213 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr19-1075 chr19 14467513 14467757 + 18.7 0.000 exon (NM_213560, exon 13 of 22) exon (NM_213560, exon 13 of 22) 7719 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr1-1425 chr1 186188322 186188566 + 18.7 0.000 intron (NM_031935, intron 106 of 106) intron (NM_031935, intron 106 of 106) -107829 NM_001303232 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr4-968 chr4 48360668 48360912 + 18.7 0.000 intron (NM_020846, intron 1 of 7) L1MB7|LINE|L1 19261 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding chr21-158 chr21 46661342 46661586 + 18.7 0.000 TTS (NM_001242866) TTS (NM_001242866) 25790 NM_206962 3275 Hs.154163 NM_001535 ENSG00000160310 PRMT2 HRMT1L1 protein arginine methyltransferase 2 protein-coding chr19-1165 chr19 3986337 3986581 + 18.7 0.000 promoter-TSS (NM_001961) promoter-TSS (NM_001961) -996 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr1-969 chr1 211382672 211382916 + 18.7 0.000 promoter-TSS (NR_026761) promoter-TSS (NR_026761) 39 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA chr8-459 chr8 134162528 134162772 + 18.7 0.000 Intergenic Intergenic 276154 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA chr18-309 chr18 13400416 13400660 + 18.7 0.000 intron (NM_181482, intron 3 of 5) intron (NM_181482, intron 3 of 5) 26996 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr13-479 chr13 59391936 59392180 + 18.7 0.000 Intergenic LTR50|LTR|ERVL -620660 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr13-311 chr13 27251515 27251759 + 18.7 0.000 promoter-TSS (NM_000982).2 promoter-TSS (NM_000982).2 82 NM_000982 6144 Hs.381123 NM_000982 ENSG00000122026 RPL21 HYPT12|L21 ribosomal protein L21 protein-coding chr19-1536 chr19 16071357 16071601 + 18.7 0.000 intron (NM_001367836, intron 1 of 8) AluJo|SINE|Alu 3941 NM_001367836 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr20-174 chr20 25548822 25549066 + 18.7 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 36587 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr22-720 chr22 44745968 44746212 + 18.7 0.000 intron (NM_181334, intron 4 of 14) MIR3|SINE|MIR -6468 NM_001198726 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr22-381 chr22 26714135 26714379 + 18.7 0.000 intron (NR_110543, intron 1 of 5) MIR|SINE|MIR 41414 NR_110543 102724827 Hs.642767 NR_110543 MIATNB - MIAT neighbor ncRNA chr17-354 chr17 76700713 76700957 + 18.7 0.000 intron (NM_198530, intron 1 of 3) L2a|LINE|L2 8762 NR_130926 439921 Hs.250723 NM_198530 ENSG00000182534 MXRA7 - matrix remodeling associated 7 protein-coding chr20-597 chr20 38272703 38272947 + 18.7 0.000 intron (NR_104170, intron 1 of 1) MLT1F1|LTR|ERVL-MaLR -12090 NM_001029864 85449 Hs.472690 NM_001029864 ENSG00000149633 KIAA1755 - KIAA1755 protein-coding chr13-428 chr13 21176313 21176557 + 18.7 0.000 promoter-TSS (NM_024026) promoter-TSS (NM_024026) 117 NM_001166017 221150 Hs.88523 NM_145061 ENSG00000165480 SKA3 C13orf3|RAMA1 spindle and kinetochore associated complex subunit 3 protein-coding chr10-330 chr10 79347343 79347587 + 18.7 0.000 promoter-TSS (NM_005729) promoter-TSS (NM_005729) -4 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr7-985 chr7 80134840 80135084 + 18.7 0.000 promoter-TSS (NM_001256414) promoter-TSS (NM_001256414) 131 NM_002069 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding chr1-2561 chr1 170895629 170895873 + 18.7 0.000 Intergenic Intergenic -39720 NM_001163629 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding chrX-498 chrX 81202495 81202739 + 18.7 0.000 promoter-TSS (NM_030763) promoter-TSS (NM_030763) 515 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding chr12-757 chr12 79689620 79689864 + 18.7 0.000 exon (NM_002583, exon 2 of 7) exon (NM_002583, exon 2 of 7) 838 NM_001354732 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr17-1297 chr17 39349566 39349810 + 18.7 0.000 intron (NM_001370209, intron 1 of 13) AluY|SINE|Alu 51938 NM_032875 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr13-186 chr13 95268089 95268333 + 18.7 0.000 intron (NM_001105515, intron 1 of 20) LTR5_Hs|LTR|ERVK 33235 NM_005845 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr6-919 chr6 16583105 16583349 + 18.7 0.000 intron (NM_000332, intron 5 of 8) intron (NM_000332, intron 5 of 8) 176957 NR_152114 6310 Hs.434961 NM_000332 ENSG00000124788 ATXN1 ATX1|D6S504E|SCA1 ataxin 1 protein-coding chr12-541 chr12 99984024 99984268 + 18.7 0.000 exon (NM_001352185, exon 1 of 26) exon (NM_001352185, exon 1 of 26) 508 NM_001352188 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding chr1-1768 chr1 58815307 58815551 + 18.7 0.000 intron (NR_108106, intron 1 of 1) CpG 30278 NR_034014 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr21-104 chr21 41613010 41613254 + 18.7 0.000 Intergenic Intergenic -66170 NR_024367 54090 Hs.570442 NR_024367 LINC00111 C21orf21|NCRNA00111 long intergenic non-protein coding RNA 111 ncRNA chr12-961 chr12 50100128 50100372 + 18.7 0.000 3' UTR (NM_003076, exon 13 of 13) 3' UTR (NM_003076, exon 13 of 13) -3758 NM_001257199 2819 Hs.524418 NM_005276 ENSG00000167588 GPD1 GPD-C|GPDH-C|HTGTI glycerol-3-phosphate dehydrogenase 1 protein-coding chr9-732 chr9 134473511 134473755 + 18.7 0.000 Intergenic Intergenic 67073 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr10-1131 chr10 34102219 34102463 + 18.7 0.000 Intergenic Intergenic -329661 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA chr10-1086 chr10 6145704 6145948 + 18.7 0.000 promoter-TSS (NM_001282630) promoter-TSS (NM_001282630) -422 NM_001282630 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr9-1452 chr9 137980685 137980929 + 18.7 0.000 intron (NM_001243812, intron 12 of 45) L1PA16|LINE|L1 -33747 NR_132977 105376331 NR_132977 LOC105376331 - uncharacterized LOC105376331 ncRNA chr9-1011 chr9 134458713 134458957 + 18.7 0.000 Intergenic Intergenic 52275 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr19-1571 chr19 31224276 31224520 + 18.7 0.000 intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 56888 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr8-585 chr8 139592483 139592727 + 18.7 0.000 Intergenic MIR|SINE|MIR 110518 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr2-756 chr2 74833949 74834193 + 18.7 0.000 5' UTR (NM_000189, exon 1 of 18) 5' UTR (NM_000189, exon 1 of 18) 1416 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr1-2481 chr1 113268135 113268379 + 18.7 0.000 Intergenic Intergenic -62004 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA chr1-2513 chr1 153920657 153920901 + 18.7 0.000 intron (NM_020699, intron 1 of 10) intron (NM_020699, intron 1 of 10) 2193 NM_020699 57459 Hs.4779 NM_020699 ENSG00000143614 GATAD2B MRD18|P66beta|p68 GATA zinc finger domain containing 2B protein-coding chr21-273 chr21 46294806 46295050 + 18.7 0.000 intron (NM_001314025, intron 3 of 4) intron (NM_001314025, intron 3 of 4) 8586 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr8-758 chr8 83937477 83937721 + 18.7 0.000 Intergenic MamGypLTR3|LTR|Gypsy -245188 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr17-475 chr17 18225871 18226115 + 18.7 0.000 intron (NM_004140, intron 1 of 22) intron (NM_004140, intron 1 of 22) 358 NM_004140 3996 Hs.513983 NM_004140 ENSG00000131899 LLGL1 DLG4|HUGL|HUGL-1|HUGL1|LLGL|Lgl1|Mgl1 LLGL scribble cell polarity complex component 1 protein-coding chr7-1150 chr7 117646265 117646509 + 18.7 0.000 intron (NM_000492, intron 23 of 26) intron (NM_000492, intron 23 of 26) -81711 NR_149084 111082987 Hs.583149 NR_149084 ENSG00000232661 CFTR-AS1 BGas CFTR antisense RNA 1 ncRNA chr18-197 chr18 12282556 12282800 + 18.7 0.000 Intergenic MER21C|LTR|ERVL -24991 NM_001303524 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr16-796 chr16 11205977 11206221 + 18.7 0.000 Intergenic Intergenic 50083 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr20-651 chr20 62386791 62387035 + 18.7 0.000 promoter-TSS (NM_001024) promoter-TSS (NM_001024) -190 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr5-676 chr5 120682542 120682786 + 18.7 0.000 intron (NM_001308088, intron 3 of 3) intron (NM_001308088, intron 3 of 3) 151200 NM_001308088 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr22-617 chr22 20323979 20324223 + 18.7 0.000 Intergenic Intergenic -4041 NM_033257 85359 Hs.410965 NM_033257 ENSG00000128185 DGCR6L DGCR6 DiGeorge syndrome critical region gene 6 like protein-coding chr4-668 chr4 7291370 7291614 + 18.7 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -18958 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr11-1580 chr11 72659712 72659956 + 18.7 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) 9230 NM_001146209 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr4-1111 chr4 181686071 181686315 + 18.7 0.000 Intergenic Intergenic 143780 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA chr18-337 chr18 46220164 46220408 + 18.7 0.000 intron (NM_001008239, intron 2 of 3) intron (NM_001008239, intron 2 of 3) 46252 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr17-375 chr17 57954472 57954716 + 18.7 0.000 intron (NM_001271875, intron 1 of 10) CpG 818 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr1-2195 chr1 3590747 3590991 + 18.7 0.000 intron (NM_001409, intron 3 of 36) intron (NM_001409, intron 3 of 36) 20639 NM_001409 1953 Hs.593645 NM_001409 ENSG00000162591 MEGF6 EGFL3 multiple EGF like domains 6 protein-coding chr17-377 chr17 74356928 74357172 + 18.7 0.000 exon (NM_001080466, exon 3 of 3) exon (NM_001080466, exon 3 of 3) 4818 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr1-1926 chr1 224368834 224369078 + 18.7 0.000 intron (NM_001277197, intron 3 of 3) intron (NM_001277197, intron 3 of 3) 12077 NM_001277200 29097 Hs.445890 NM_014184 ENSG00000143771 CNIH4 CNIH-4|CNIH2|HSPC163 cornichon family AMPA receptor auxiliary protein 4 protein-coding chr11-961 chr11 131889152 131889396 + 18.7 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -20650 NR_147850 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr17-1343 chr17 56491661 56491905 + 18.7 0.000 intron (NM_001370326, intron 18 of 20) intron (NM_001370326, intron 18 of 20) -101916 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr19-1006 chr19 48291145 48291389 + 18.7 0.000 Intergenic CpG 19980 NM_001369812 163071 Hs.511883 NM_153608 ENSG00000178150 ZNF114 - zinc finger protein 114 protein-coding chr3-680 chr3 160450874 160451118 + 18.7 0.000 intron (NR_148403, intron 1 of 20) LTR24|LTR|ERV1 -1158 NR_148401 100174949 NR_148401 ENSG00000248710 TRIM59-IFT80 IFT80-L TRIM59-IFT80 protein ncRNA chr1-2284 chr1 21540050 21540294 + 18.7 0.000 intron (NM_001177520, intron 1 of 9) intron (NM_001177520, intron 1 of 9) -11098 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr5-1178 chr5 173513613 173513857 + 18.7 0.000 Intergenic L2a|LINE|L2 -65899 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA chr9-1397 chr9 135788478 135788722 + 18.7 0.000 intron (NM_001272003, intron 29 of 30) intron (NM_001272003, intron 29 of 30) 86415 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr10-967 chr10 5626379 5626623 + 18.7 0.000 Intergenic Intergenic -30383 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr4-97 chr4 184649383 184649627 + 18.7 0.000 promoter-TSS (NM_152683) promoter-TSS (NM_152683) -30 NM_001354777 836 Hs.141125 NM_004346 ENSG00000164305 CASP3 CPP32|CPP32B|SCA-1 caspase 3 protein-coding chr13-457 chr13 42486760 42487004 + 18.7 0.000 TTS (NR_135319) TTS (NR_135319) 61990 NR_135319 105370177 NR_135319 ENSG00000283554 LINC02341 - long intergenic non-protein coding RNA 2341 ncRNA chr1-1414 chr1 178095165 178095409 + 18.7 0.000 intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 1183 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding chr3-677 chr3 155391738 155391982 + 18.7 0.000 Intergenic Intergenic -93943 NR_146955 100874036 Hs.128933 NR_146955 ENSG00000242925 PLCH1-AS2 - PLCH1 antisense RNA 2 ncRNA chrX-407 chrX 153985556 153985800 + 18.7 0.000 Intergenic Intergenic -4502 NR_036175 100422877 NR_036175 ENSG00000283694 MIR3202-2 mir-3202-2 microRNA 3202-2 ncRNA chr5-528 chr5 33261371 33261615 + 18.7 0.000 Intergenic Intergenic 31758 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr1-1846 chr1 155763402 155763646 + 18.6 0.000 TTS (NM_001282861) TTS (NM_001282861) 17756 NR_024117 100129405 Hs.656361 NR_024117 MSTO2P MSTO2 misato family member 2, pseudogene pseudo chr11-1115 chr11 61776592 61776836 + 18.6 0.000 intron (NM_013279, intron 10 of 25) intron (NM_013279, intron 10 of 25) 15847 NR_030342 693196 NR_030342 ENSG00000284108 MIR611 MIRN611|hsa-mir-611 microRNA 611 ncRNA chr2-952 chr2 73205741 73205985 + 18.6 0.000 intron (NM_001134462, intron 1 of 2) AluJb|SINE|Alu 3289 NM_001134462 344022 Hs.694384 NM_001134462 ENSG00000214513 NOTO - notochord homeobox protein-coding chr3-691 chr3 196968564 196968808 + 18.6 0.000 intron (NM_025163, intron 1 of 2) CpG 147 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr7-1329 chr7 84025757 84026001 + 18.6 0.000 intron (NM_006080, intron 6 of 16) MIRb|SINE|MIR 168910 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding chr4-1103 chr4 169269013 169269257 + 18.6 0.000 exon (NM_020870, exon 2 of 12) exon (NM_020870, exon 2 of 12) 1821 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr2-1085 chr2 53475365 53475609 + 18.6 0.000 Intergenic Intergenic -292296 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr4-147 chr4 121696884 121697128 + 18.6 0.000 promoter-TSS (NM_001154) promoter-TSS (NM_001154) -26 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding chr16-676 chr16 85702984 85703228 + 18.6 0.000 Intergenic AluJb|SINE|Alu -14152 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr15-392 chr15 72237591 72237835 + 18.6 0.000 Intergenic Intergenic -6089 NM_001206798 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr2-1501 chr2 111930681 111930925 + 18.6 0.000 intron (NM_006343, intron 2 of 18) intron (NM_006343, intron 2 of 18) 32196 NM_006343 10461 Hs.306178 NM_006343 ENSG00000153208 MERTK MER|RP38|Tyro12|c-Eyk|c-mer MER proto-oncogene, tyrosine kinase protein-coding chr19-1362 chr19 35257787 35258031 + 18.6 0.000 intron (NM_001260490, intron 2 of 6) intron (NM_001260490, intron 2 of 6) 9253 NM_001260489 51599 Hs.466507 NM_015925 ENSG00000105699 LSR ILDR3|LISCH7 lipolysis stimulated lipoprotein receptor protein-coding chr9-999 chr9 133842012 133842256 + 18.6 0.000 intron (NM_001134398, intron 3 of 29) intron (NM_001134398, intron 3 of 29) -102179 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr19-649 chr19 578108 578352 + 18.6 0.000 intron (NM_001728, intron 2 of 8) CpG-12888 5634 NM_001322243 682 Hs.501293 NM_001728 ENSG00000172270 BSG 5F7|CD147|EMMPRIN|EMPRIN|OK|SLC7A11|TCSF basigin (Ok blood group) protein-coding chr2-1139 chr2 177998051 177998295 + 18.6 0.000 intron (NM_001077197, intron 3 of 20) intron (NM_001077197, intron 3 of 20) 74604 NM_016953 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chrX-348 chrX 153765527 153765771 + 18.6 0.000 intron (NM_005393, intron 2 of 35) intron (NM_005393, intron 2 of 35) 1400 NM_005393 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding chr10-293 chr10 73799135 73799379 + 18.6 0.000 non-coding (NR_160292, exon 22 of 27) non-coding (NR_160292, exon 22 of 27) 2142 NR_038357 100507331 Hs.631828 NR_038357 ENSG00000272589 ZSWIM8-AS1 - ZSWIM8 antisense RNA 1 ncRNA chr18-127 chr18 45839479 45839723 + 18.6 0.000 intron (NM_213602, intron 4 of 5) intron (NM_213602, intron 4 of 5) 13926 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr19-912 chr19 1940085 1940329 + 18.6 0.000 promoter-TSS (NM_001319) promoter-TSS (NM_001319) -965 NM_001319 1455 Hs.651905 NM_001319 ENSG00000133275 CSNK1G2 CK1g2 casein kinase 1 gamma 2 protein-coding chr15-577 chr15 72797069 72797313 + 18.6 0.000 intron (NR_040107, intron 2 of 2) CpG -13433 NM_001365225 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding chr2-1367 chr2 208208368 208208612 + 18.6 0.000 Intergenic Intergenic -18460 NM_001099334 389073 Hs.198416 NM_001099334 ENSG00000188674 C2orf80 GONDA1 chromosome 2 open reading frame 80 protein-coding chr5-600 chr5 115419891 115420135 + 18.6 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -123359 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding chr9-465 chr9 12776023 12776267 + 18.6 0.000 intron (NM_203403, intron 1 of 1) intron (NM_203403, intron 1 of 1) 1125 NM_203403 286343 Hs.445356 NM_203403 ENSG00000153714 LURAP1L C9orf150|HYST0841|LRAP35b|bA3L8.2 leucine rich adaptor protein 1 like protein-coding chr11-1152 chr11 66956847 66957091 + 18.6 0.000 intron (NM_001040716, intron 1 of 22) L2b|LINE|L2 1414 NM_000920 5091 Hs.89890 NM_000920 ENSG00000173599 PC PCB pyruvate carboxylase protein-coding chr10-1138 chr10 36634931 36635175 + 18.6 0.000 Intergenic Intergenic -490804 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding chr5-817 chr5 147509229 147509473 + 18.6 0.000 intron (NM_001197294, intron 1 of 13) CpG 717 NM_001197294 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding chr11-1469 chr11 45293617 45293861 + 18.6 0.000 Intergenic Intergenic -7398 NM_001247987 57586 Hs.436643 NM_020826 ENSG00000019505 SYT13 - synaptotagmin 13 protein-coding chr8-956 chr8 126699022 126699266 + 18.6 0.000 Intergenic L1PA16|LINE|L1 -140666 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr13-461 chr13 44574111 44574355 + 18.6 0.000 exon (NM_183422, exon 1 of 3) exon (NM_183422, exon 1 of 3) -1663 NR_038381 641467 Hs.624196 NR_038381 ENSG00000278156 TSC22D1-AS1 - TSC22D1 antisense RNA 1 ncRNA chr2-1688 chr2 46490511 46490755 + 18.6 0.000 Intergenic Intergenic 11068 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding chr2-519 chr2 202064241 202064485 + 18.6 0.000 Intergenic Intergenic -8892 NM_001367720 100652824 Hs.686898 NM_001080445 ENSG00000182329 KIAA2012 - KIAA2012 protein-coding chr7-490 chr7 137343439 137343683 + 18.6 0.000 5' UTR (NM_002825, exon 1 of 5) 5' UTR (NM_002825, exon 1 of 5) 172 NM_001321387 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding chr6-813 chr6 56763943 56764187 + 18.6 0.000 intron (NM_001144770, intron 2 of 94) intron (NM_001144770, intron 2 of 94) 79600 NM_183380 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding chr1-2146 chr1 246428540 246428784 + 18.6 0.000 intron (NM_001167740, intron 1 of 11) MIR|SINE|MIR -11250 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr15-347 chr15 36579556 36579800 + 18.6 0.000 promoter-TSS (NM_001321757) promoter-TSS (NM_001321757) 52 NM_001321756 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr9-574 chr9 136836008 136836252 + 18.6 0.000 intron (NM_001173988, intron 8 of 14) intron (NM_001173988, intron 8 of 14) 5173 NR_036251 100422860 NR_036251 ENSG00000265806 MIR4292 - microRNA 4292 ncRNA chr11-1181 chr11 75434895 75435139 + 18.6 0.000 3' UTR (NM_001351167, exon 13 of 13) 3' UTR (NM_001351167, exon 13 of 13) -4388 NM_001039548 283212 Hs.292451 NM_173583 ENSG00000149243 KLHL35 - kelch like family member 35 protein-coding chr6-414 chr6 124962814 124963058 + 18.6 0.000 promoter-TSS (NR_026876) promoter-TSS (NR_026876) 91 NR_026876 7955 Hs.544438 NR_026876 ENSG00000236548 RNF217-AS1 STL RNF217 antisense RNA 1 (head to head) ncRNA chr2-1630 chr2 24276745 24276989 + 18.6 0.000 intron (NM_001348182, intron 16 of 38) MLT1K|LTR|ERVL-MaLR 83669 NM_006277 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding chr7-477 chr7 94004208 94004452 + 18.6 0.000 promoter-TSS (NM_005868) promoter-TSS (NM_005868) 25 NM_005868 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding chr5-776 chr5 114450398 114450642 + 18.6 0.000 intron (NR_130785, intron 11 of 12) intron (NR_130785, intron 11 of 12) 17009 NM_170775 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding chr4-538 chr4 105088170 105088414 + 18.6 0.000 Intergenic Intergenic -57583 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding chr12-850 chr12 62250750 62250994 + 18.6 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -9468 NM_001252079 9958 Hs.434951 NM_006313 ENSG00000135655 USP15 UNPH-2|UNPH4 ubiquitin specific peptidase 15 protein-coding chr11-1600 chr11 76207736 76207980 + 18.6 0.000 Intergenic CpG-4722 -1356 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding chr17-981 chr17 44170423 44170667 + 18.6 0.000 promoter-TSS (NM_080863) promoter-TSS (NM_080863) -159 NM_080863 92591 Hs.534517 NM_080863 ENSG00000161664 ASB16 - ankyrin repeat and SOCS box containing 16 protein-coding chr2-410 chr2 152543175 152543419 + 18.6 0.000 intron (NM_052905, intron 3 of 25) intron (NM_052905, intron 3 of 25) 174164 NM_001365600 55660 Hs.643580 NM_017892 ENSG00000196504 PRPF40A FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 pre-mRNA processing factor 40 homolog A protein-coding chr7-1217 chr7 6476631 6476875 + 18.6 0.000 intron (NM_001100603, intron 1 of 3) L2c|LINE|L2 7399 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr6-905 chr6 9647421 9647665 + 18.6 0.000 Intergenic Intergenic -756959 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA chr6-889 chr6 3340873 3341117 + 18.6 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 82048 NM_001135750 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr20-592 chr20 36820971 36821215 + 18.6 0.000 intron (NM_199181, intron 3 of 14) L1ME4b|LINE|L1 38780 NM_199181 140710 Hs.460807 NM_080627 ENSG00000149639 SOGA1 C20orf117|KIAA0889|SOGA suppressor of glucose, autophagy associated 1 protein-coding chr9-993 chr9 132121788 132122032 + 18.6 0.000 Intergenic Intergenic -40148 NM_032536 84628 Hs.163642 NM_032536 ENSG00000196358 NTNG2 LHLL9381|Lmnt2|NTNG1|bA479K20.1 netrin G2 protein-coding chr8-546 chr8 20634095 20634339 + 18.6 0.000 Intergenic Intergenic -19291 NR_145737 109616983 NR_145737 SNORD3F - small nucleolar RNA, C/D box 3F snoRNA chr15-290 chr15 60402325 60402569 + 18.6 0.000 Intergenic Intergenic -4461 NM_001136015 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr1-777 chr1 149936718 149936962 + 18.6 0.000 promoter-TSS (NM_181873) promoter-TSS (NM_181873) 39 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr15-452 chr15 36808220 36808464 + 18.6 0.000 exon (NM_001321757, exon 12 of 13) exon (NM_001321757, exon 12 of 13) 10164 NR_027320 161635 Hs.659822 NR_027320 CSNK1A1P1 CSNK1A1P casein kinase 1 alpha 1 pseudogene 1 pseudo chr22-479 chr22 28380900 28381144 + 18.6 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -78847 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr16-933 chr16 22787914 22788158 + 18.6 0.000 Intergenic CR1-3_Croc|LINE|CR1 -26126 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding chr6-1021 chr6 79233028 79233272 + 18.6 0.000 promoter-TSS (NR_040671) promoter-TSS (NR_040671) -524 NR_040671 100288198 Hs.586270 NR_040671 ENSG00000270362 HMGN3-AS1 - HMGN3 antisense RNA 1 ncRNA chr3-1147 chr3 123007778 123008022 + 18.6 0.000 intron (NR_046079, intron 1 of 22) intron (NR_046079, intron 1 of 22) -14627 NM_001256346 54437 Hs.210870 NM_018987 ENSG00000082684 SEMA5B SEMAG|SemG semaphorin 5B protein-coding chr1-1304 chr1 28510505 28510749 + 18.6 0.000 non-coding (NR_002909, exon 3 of 3) non-coding (NR_002909, exon 3 of 3) 2069 NR_004404 26768 NR_004404 ENSG00000200087 SNORA73B 105A|E1c|RNU105A|RNU17B|U17B small nucleolar RNA, H/ACA box 73B snoRNA chr2-1312 chr2 143955463 143955707 + 18.6 0.000 intron (NM_024659, intron 7 of 9) intron (NM_024659, intron 7 of 9) 18518 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA chr4-501 chr4 5708388 5708632 + 18.6 0.000 promoter-TSS (NM_147127) promoter-TSS (NM_147127) 49 NM_147127 132884 Hs.87306 NM_147127 ENSG00000173040 EVC2 LBN|WAD EvC ciliary complex subunit 2 protein-coding chr16-379 chr16 89721634 89721878 + 18.6 0.000 promoter-TSS (NM_004913) promoter-TSS (NM_004913) 219 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr11-597 chr11 6390193 6390437 + 18.6 0.000 promoter-TSS (NM_001007593) promoter-TSS (NM_001007593) -159 NM_001365135 6609 Hs.498173 NM_000543 ENSG00000166311 SMPD1 ASM|ASMASE|NPD sphingomyelin phosphodiesterase 1 protein-coding chrX-404 chrX 151789252 151789496 + 18.6 0.000 Intergenic Intergenic 54628 NM_005140 1260 Hs.447360 NM_005140 ENSG00000183862 CNGA2 CNCA|CNCA1|CNG2|OCNC1|OCNCALPHA|OCNCa cyclic nucleotide gated channel alpha 2 protein-coding chr6-410 chr6 97669263 97669507 + 18.6 0.000 intron (NR_110757, intron 3 of 4) intron (NR_110757, intron 3 of 4) -355146 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr1-1654 chr1 11134231 11134475 + 18.6 0.000 exon (NM_004958, exon 37 of 58) exon (NM_004958, exon 37 of 58) -9545 NR_046600 100873935 Hs.679133 NR_046600 ENSG00000225602 MTOR-AS1 - MTOR antisense RNA 1 ncRNA chr8-591 chr8 143916452 143916696 + 18.6 0.000 exon (NM_201380, exon 32 of 32) exon (NM_201380, exon 32 of 32) 23023 NM_201384 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr3-1000 chr3 119702780 119703024 + 18.6 0.000 promoter-TSS (NM_001320316) promoter-TSS (NM_001320316) -120 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding chr12-1165 chr12 76277560 76277804 + 18.6 0.000 intron (NR_146531, intron 1 of 3) intron (NR_146531, intron 1 of 3) 17799 NR_146531 105369848 NR_146531 LNCOG LINC02407|lncRNA-OG lncRNA osteogenesis associated ncRNA chr20-573 chr20 32509694 32509938 + 18.6 0.000 promoter-TSS (NR_110619) promoter-TSS (NR_110619) -143 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr17-1054 chr17 78256127 78256371 + 18.6 0.000 Intergenic Intergenic 22243 NR_073178 100996291 Hs.744493 NR_073178 ENSG00000204277 LINC01993 - long intergenic non-protein coding RNA 1993 ncRNA chr7-1456 chr7 157407227 157407471 + 18.6 0.000 intron (NM_058246, intron 8 of 9) intron (NM_058246, intron 8 of 9) -58882 NR_110157 101927914 Hs.623826 NR_110157 ENSG00000234210 LOC101927914 - uncharacterized LOC101927914 ncRNA chr19-1097 chr19 37334400 37334644 + 18.6 0.000 promoter-TSS (NM_001329761) promoter-TSS (NM_001329761) -102 NM_001329769 284459 Hs.640243 NM_181786 ENSG00000181666 ZNF875 HKR1 zinc finger protein 875 protein-coding chr1-1246 chr1 1437621 1437865 + 18.6 0.000 intron (NM_199121, intron 2 of 2) intron (NM_199121, intron 2 of 2) 2053 NM_199121 64856 Hs.449009 NM_022834 ENSG00000179403 VWA1 WARP von Willebrand factor A domain containing 1 protein-coding chr15-187 chr15 77266751 77266995 + 18.6 0.000 intron (NM_024776, intron 3 of 7) L1PB1|LINE|L1 -41469 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chrX-183 chrX 119512491 119512735 + 18.6 0.000 Intergenic Intergenic -43493 NR_028443 100303728 Hs.714405 NR_028443 ENSG00000224281 SLC25A5-AS1 - SLC25A5 antisense RNA 1 ncRNA chr7-742 chr7 69599713 69599957 + 18.6 0.000 exon (NM_001127232, exon 1 of 5) exon (NM_001127232, exon 1 of 5) 1360 NM_015570 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding chr18-160 chr18 12308243 12308487 + 18.6 0.000 intron (NM_001303527, intron 1 of 2) CpG 124 NM_032525 84617 Hs.193491 NM_032525 ENSG00000176014 TUBB6 FPVEPD|HsT1601|TUBB-5 tubulin beta 6 class V protein-coding chr12-1254 chr12 122679240 122679484 + 18.6 0.000 Intergenic L1MB8|LINE|L1 16637 NR_162094 113218484 NR_162094 MIR9902-1 - microRNA 9902-1 ncRNA chr12-1160 chr12 71183935 71184179 + 18.6 0.000 Intergenic HAL1|LINE|L1 -26058 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding chr11-1269 chr11 27282188 27282432 + 18.6 0.000 Intergenic Intergenic -62197 NR_125767 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA chr16-601 chr16 88964037 88964281 + 18.6 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 13048 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr11-919 chr11 67442913 67443157 + 18.6 0.000 intron (NM_001018070, intron 2 of 11) intron (NM_001018070, intron 2 of 11) 441 NM_020441 57175 Hs.6191 NM_020441 ENSG00000172725 CORO1B CORONIN-2 coronin 1B protein-coding chr10-637 chr10 49186837 49187081 + 18.6 0.000 intron (NM_001288742, intron 1 of 4) L1ME3G|LINE|L1 1432 NM_001288741 170371 Hs.385493 NM_001010863 ENSG00000204161 TMEM273 C10orf128 transmembrane protein 273 protein-coding chr9-568 chr9 136304380 136304624 + 18.6 0.000 promoter-TSS (NR_111982) promoter-TSS (NR_111982) -408 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr11-1285 chr11 46505258 46505502 + 18.6 0.000 intron (NR_160027, intron 8 of 18) intron (NR_160027, intron 8 of 18) -53491 NR_036117 100422827 NR_036117 ENSG00000265014 MIR3160-1 mir-3160-1 microRNA 3160-1 ncRNA chr14-624 chr14 53670831 53671075 + 18.6 0.000 Intergenic Intergenic 277531 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA chr8-509 chr8 90001265 90001509 + 18.6 0.000 promoter-TSS (NM_001359) promoter-TSS (NM_001359) 35 NM_001330575 1666 Hs.492212 NM_001359 ENSG00000104325 DECR1 DECR|NADPH|SDR18C1 2,4-dienoyl-CoA reductase 1 protein-coding chr9-489 chr9 127224588 127224832 + 18.6 0.000 Intergenic CpG -38952 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr1-1828 chr1 145849872 145850116 + 18.6 0.000 TTS (NR_106794) TTS (NR_106794) 651 NR_106794 102466191 NR_106794 ENSG00000278549 MIR6736 hsa-mir-6736 microRNA 6736 ncRNA chr8-257 chr8 38937161 38937405 + 18.6 0.000 intron (NM_021623, intron 3 of 11) intron (NM_021623, intron 3 of 11) 35937 NM_021623 59339 Hs.369123 NM_021623 ENSG00000169499 PLEKHA2 TAPP2 pleckstrin homology domain containing A2 protein-coding chr5-251 chr5 176551556 176551800 + 18.6 0.000 intron (NM_017675, intron 1 of 31) intron (NM_017675, intron 1 of 31) 2336 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding chr8-949 chr8 121994397 121994641 + 18.6 0.000 Intergenic Intergenic -353079 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr7-388 chr7 79240138 79240382 + 18.6 0.000 intron (NM_001301128, intron 1 of 20) L2c|LINE|L2 -212697 NR_038346 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA chr11-714 chr11 33161290 33161534 + 18.6 0.000 promoter-TSS (NM_001033506) promoter-TSS (NM_001033506) 68 NM_001326 1479 Hs.44402 NM_001326 ENSG00000176102 CSTF3 CSTF-77 cleavage stimulation factor subunit 3 protein-coding chr13-320 chr13 36346389 36346633 + 18.6 0.000 promoter-TSS (NR_045180) promoter-TSS (NR_045180) 80 NR_045181 100507135 Hs.631781 NR_045180 ENSG00000120664 SPART-AS1 C13orf43|SPG20-AS1|SPG20OS SPART antisense RNA 1 ncRNA chr4-576 chr4 1986737 1986981 + 18.6 0.000 promoter-TSS (NR_030641) promoter-TSS (NR_030641) -382 NR_030641 100126332 NR_030641 ENSG00000284587 MIR943 MIRN943|hsa-mir-943 microRNA 943 ncRNA chr1-2322 chr1 31701294 31701538 + 18.6 0.000 intron (NM_001856, intron 2 of 70) intron (NM_001856, intron 2 of 70) 2601 NM_001856 1307 Hs.368921 NM_001856 ENSG00000084636 COL16A1 447AA|FP1572 collagen type XVI alpha 1 chain protein-coding chr1-2558 chr1 170700666 170700910 + 18.6 0.000 intron (NM_022716, intron 1 of 3) intron (NM_022716, intron 1 of 3) 36657 NM_006902 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding chr1-2366 chr1 44472742 44472986 + 18.6 0.000 intron (NM_001319957, intron 1 of 13) intron (NM_001319957, intron 1 of 13) 48863 NM_001319957 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr9-293 chr9 33024867 33025111 + 18.6 0.000 promoter-TSS (NM_001314039) promoter-TSS (NM_001314039) 131 NM_001369003 54840 Hs.20158 NM_017692 ENSG00000137074 APTX AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT aprataxin protein-coding chr9-1072 chr9 71769541 71769785 + 18.6 0.000 Intergenic CpG-28400 -1150 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr10-674 chr10 102231537 102231781 + 18.6 0.000 exon (NM_005029, exon 3 of 4) exon (NM_005029, exon 3 of 4) 5360 NM_152310 83401 Hs.302130 NM_152310 ENSG00000119915 ELOVL3 CIG-30|CIG30 ELOVL fatty acid elongase 3 protein-coding chrX-152 chrX 17655560 17655804 + 18.6 0.000 intron (NM_001291868, intron 1 of 7) CpG 20182 NM_001291868 4810 Hs.201623 NM_198270 ENSG00000188158 NHS CTRCT40|CXN|SCML1 NHS actin remodeling regulator protein-coding chr11-712 chr11 33039237 33039481 + 18.6 0.000 promoter-TSS (NM_018393) promoter-TSS (NM_018393) -213 NM_018393 55346 Hs.655341 NM_018393 ENSG00000176148 TCP11L1 dJ85M6.3 t-complex 11 like 1 protein-coding chr19-1182 chr19 7863505 7863749 + 18.6 0.000 exon (NM_145245, exon 19 of 19) exon (NM_145245, exon 19 of 19) 10763 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr1-1109 chr1 226870615 226870859 + 18.6 0.000 intron (NM_000447, intron 1 of 12) CpG 121 NM_000447 5664 Hs.25363 NM_000447 ENSG00000143801 PSEN2 AD3L|AD4|CMD1V|PS2|STM2 presenilin 2 protein-coding chr12-737 chr12 42589025 42589269 + 18.6 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 599 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr12-1258 chr12 123149700 123149944 + 18.6 0.000 Intergenic Intergenic -39333 NM_001300801 57605 Hs.272759 NM_020845 ENSG00000090975 PITPNM2 NIR-3|NIR3|RDGB2|RDGBA2 phosphatidylinositol transfer protein membrane associated 2 protein-coding chr5-703 chr5 169161350 169161594 + 18.6 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 102222 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr18-323 chr18 29112195 29112439 + 18.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR -935187 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chr4-238 chr4 82429459 82429703 + 18.6 0.000 exon (NM_031372, exon 1 of 8) exon (NM_031372, exon 1 of 8) 644 NM_031372 9987 Hs.527105 NM_005463 ENSG00000152795 HNRNPDL HNRNP|HNRPDL|JKTBP|JKTBP2|LGMD1G|LGMDD3|laAUF1 heterogeneous nuclear ribonucleoprotein D like protein-coding chr15-438 chr15 77282442 77282686 + 18.6 0.000 intron (NM_024776, intron 3 of 7) intron (NM_024776, intron 3 of 7) -57160 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr21-228 chr21 32266935 32267179 + 18.6 0.000 Intergenic Intergenic 11992 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding chr20-486 chr20 33017400 33017644 + 18.6 0.000 intron (NM_025227, intron 7 of 15) intron (NM_025227, intron 7 of 15) 9818 NM_025227 80341 Hs.257045 NM_025227 ENSG00000078898 BPIFB2 BPIL1|C20orf184|LPLUNC2|RYSR|dJ726C3.2 BPI fold containing family B member 2 protein-coding chr7-1034 chr7 138000377 138000621 + 18.6 0.000 intron (NM_001253775, intron 1 of 3) intron (NM_001253775, intron 1 of 3) 1587 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding chr16-377 chr16 88687516 88687760 + 18.6 0.000 TTS (NR_024399) TTS (NR_024399) -1131 NM_178310 333929 Hs.673548 NM_178310 ENSG00000185669 SNAI3 SMUC|SNAIL3|ZNF293|Zfp293 snail family transcriptional repressor 3 protein-coding chr19-651 chr19 984157 984401 + 18.4 0.000 promoter-TSS (NM_024100) promoter-TSS (NM_024100) -49 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chrX-352 chrX 154477069 154477313 + 18.4 0.000 TTS (NM_006014) TTS (NM_006014) 2066 NM_006014 8270 Hs.444619 NM_006014 ENSG00000196976 LAGE3 CVG5|DXS9879E|DXS9951E|ESO3|GAMOS2|ITBA2|Pcc1 L antigen family member 3 protein-coding chr5-909 chr5 111143974 111144218 + 18.4 0.000 Intergenic L1MEg1|LINE|L1 51924 NM_139281 134430 Hs.533237 NM_139281 ENSG00000134987 WDR36 GLC1G|TA-WDRP|TAWDRP|UTP21 WD repeat domain 36 protein-coding chr11-1434 chr11 22193000 22193244 + 18.4 0.000 promoter-TSS (NM_213599) promoter-TSS (NM_213599) 37 NM_001142649 203859 Hs.154329 NM_213599 ENSG00000171714 ANO5 GDD1|LGMD2L|LGMDR12|TMEM16E anoctamin 5 protein-coding chr2-1258 chr2 71952859 71953103 + 18.4 0.000 Intergenic Intergenic 194881 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding chr17-789 chr17 56699549 56699793 + 18.4 0.000 Intergenic Penelope1_Vert|LINE|Penelope 105972 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding chr17-675 chr17 5034108 5034352 + 18.4 0.000 exon (NM_017986, exon 3 of 5) exon (NM_017986, exon 3 of 5) 1196 NM_017986 55065 Hs.632247 NM_017986 ENSG00000132517 SLC52A1 GPCR42|GPR172B|PAR2|RBFVD|RFT1|RFVT1|hRFT1 solute carrier family 52 member 1 protein-coding chr18-332 chr18 42744767 42745011 + 18.4 0.000 intron (NM_002930, intron 4 of 4) intron (NM_002930, intron 4 of 4) 370796 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding chr1-1133 chr1 14742318 14742562 + 18.4 0.000 intron (NM_201628, intron 1 of 14) intron (NM_201628, intron 1 of 14) 143723 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr1-2099 chr1 183023468 183023712 + 18.4 0.000 5' UTR (NM_002293, exon 1 of 28) 5' UTR (NM_002293, exon 1 of 28) 170 NM_002293 3915 Hs.609663 NM_002293 ENSG00000135862 LAMC1 LAMB2 laminin subunit gamma 1 protein-coding chr12-517 chr12 48972593 48972837 + 18.4 0.000 promoter-TSS (NM_003394) promoter-TSS (NM_003394) -980 NM_003394 7480 Hs.91985 NM_003394 ENSG00000169884 WNT10B SHFM6|STHAG8|WNT-12 Wnt family member 10B protein-coding chrX-191 chrX 11461617 11461861 + 18.4 0.000 intron (NR_109776, intron 1 of 14) intron (NR_109776, intron 1 of 14) -33921 NM_001287242 395 Hs.435291 NM_001174 ENSG00000047648 ARHGAP6 RHOGAP6|RHOGAPX-1 Rho GTPase activating protein 6 protein-coding chr15-593 chr15 78125086 78125330 + 18.4 0.000 intron (NR_125435, intron 1 of 4) intron (NR_125435, intron 1 of 4) 6237 NM_001271888 10518 Hs.129867 NM_006383 ENSG00000136425 CIB2 DFNB48|KIP2|USH1J calcium and integrin binding family member 2 protein-coding chr3-1512 chr3 197317400 197317644 + 18.4 0.000 Intergenic Intergenic -18201 NM_001366203 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding chr18-111 chr18 25464323 25464567 + 18.4 0.000 Intergenic Intergenic -112279 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chrX-369 chrX 41352804 41353048 + 18.4 0.000 intron (NR_126093, intron 17 of 18) intron (NR_126093, intron 17 of 18) 18760 NM_001363819 1654 Hs.728563 NM_001356 ENSG00000215301 DDX3X CAP-Rf|DBX|DDX14|DDX3|HLP2|MRX102 DEAD-box helicase 3 X-linked protein-coding chr2-1500 chr2 111022520 111022764 + 18.4 0.000 intron (NM_001371254, intron 15 of 18) intron (NM_001371254, intron 15 of 18) 92946 NR_122074 400997 Hs.652337 NR_122074 ENSG00000204581 ACOXL-AS1 - ACOXL antisense RNA 1 ncRNA chr19-1471 chr19 4684284 4684528 + 18.4 0.000 3' UTR (NM_001242901, exon 3 of 3) 3' UTR (NM_001242901, exon 3 of 3) 5124 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr6-1130 chr6 168057198 168057442 + 18.4 0.000 exon (NM_001122841, exon 11 of 11) exon (NM_001122841, exon 11 of 11) 18515 NM_001122841 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr7-1370 chr7 102468733 102468977 + 18.4 0.000 exon (NM_152892, exon 9 of 15) exon (NM_152892, exon 9 of 15) -2614 NR_039677 100616367 NR_039677 ENSG00000284596 MIR4467 - microRNA 4467 ncRNA chr9-966 chr9 125161253 125161497 + 18.4 0.000 intron (NM_002721, intron 2 of 6) intron (NM_002721, intron 2 of 6) -17847 NM_001144877 286205 Hs.59504 NM_173690 ENSG00000173611 SCAI C9orf126|NET40 suppressor of cancer cell invasion protein-coding chr4-865 chr4 693102 693346 + 18.4 0.000 Intergenic Intergenic -4073 NM_032219 84179 Hs.567612 NM_032219 ENSG00000169026 SLC49A3 LP2561|MFSD7 solute carrier family 49 member 3 protein-coding chr11-1616 chr11 88759555 88759799 + 18.4 0.000 intron (NM_001143831, intron 2 of 8) L1PREC2|LINE|L1 255101 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr2-391 chr2 42169627 42169871 + 18.4 0.000 intron (NM_001145076, intron 1 of 21) CpG 396 NM_019063 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr9-1319 chr9 124511379 124511623 + 18.4 0.000 Intergenic MIRb|SINE|MIR -4102 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr3-588 chr3 54122068 54122312 + 18.4 0.000 promoter-TSS (NM_018398) promoter-TSS (NM_018398) -362 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr19-1522 chr19 12928460 12928704 + 18.4 0.000 exon (NM_004461, exon 6 of 13) exon (NM_004461, exon 6 of 13) -1940 NR_149078 106144598 Hs.579870 NR_149078 ENSG00000266975 FARSA-AS1 - FARSA antisense RNA 1 ncRNA chr14-651 chr14 77707276 77707520 + 18.4 0.000 promoter-TSS (NM_001267864) promoter-TSS (NM_001267864) 625 NM_006020 8846 Hs.94542 NM_006020 ENSG00000100601 ALKBH1 ABH|ABH1|ALKBH|alkB|hABH alkB homolog 1, histone H2A dioxygenase protein-coding chr3-1140 chr3 88810389 88810633 + 18.4 0.000 Intergenic Intergenic -297110 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding chr5-1077 chr5 104417466 104417710 + 18.4 0.000 Intergenic L1PA13|LINE|L1 -681886 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chrX-525 chrX 115650868 115651112 + 18.4 0.000 TTS (NM_005032) TTS (NM_005032) 57439 NM_001172335 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr8-794 chr8 141476691 141476935 + 18.4 0.000 intron (NR_160399, intron 12 of 29) L2a|LINE|L2 30416 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding chr10-586 chr10 73907699 73907943 + 18.4 0.000 Intergenic MIR|SINE|MIR -3280 NM_001145031 5328 Hs.77274 NM_002658 ENSG00000122861 PLAU ATF|BDPLT5|QPD|UPA|URK|u-PA plasminogen activator, urokinase protein-coding chr2-322 chr2 125615512 125615756 + 18.4 0.000 Intergenic L1PB1|LINE|L1 502351 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA chr2-480 chr2 264880 265124 + 18.4 0.000 promoter-TSS (NR_104224) promoter-TSS (NR_104224) 55 NM_004300 52 Hs.558296 NM_004300 ENSG00000143727 ACP1 HAAP|LMW-PTP|LMWPTP acid phosphatase 1 protein-coding chr5-635 chr5 158543816 158544060 + 18.4 0.000 Intergenic Intergenic -134165 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA chr6-681 chr6 43516985 43517229 + 18.4 0.000 promoter-TSS (NM_015388) promoter-TSS (NM_015388) 18 NM_203290 9533 Hs.743509 NM_004875 ENSG00000171453 POLR1C AC40|HLD11|RPA39|RPA40|RPA5|RPAC1|RPC40|TCS3 RNA polymerase I and III subunit C protein-coding chr11-1437 chr11 28566561 28566805 + 18.4 0.000 Intergenic Intergenic -89135 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA chr7-729 chr7 47218838 47219082 + 18.4 0.000 Intergenic Intergenic 245843 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr5-1055 chr5 73370811 73371055 + 18.4 0.000 Intergenic Intergenic 33027 NR_146627 105379033 Hs.145178 NR_146627 LINC02230 - long intergenic non-protein coding RNA 2230 ncRNA chr13-460 chr13 44500031 44500275 + 18.4 0.000 intron (NM_183422, intron 1 of 2) L4_A_Mam|LINE|RTE-X -25852 NM_001243798 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr10-1173 chr10 69266493 69266737 + 18.4 0.000 exon (NM_025130, exon 18 of 18) exon (NM_025130, exon 18 of 18) -3385 NM_033497 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr2-285 chr2 36394930 36395174 + 18.4 0.000 intron (NM_016441, intron 1 of 16) AluSx|SINE|Alu 39274 NM_016441 51232 Hs.699247 NM_016441 ENSG00000150938 CRIM1 CRIM-1|S52 cysteine rich transmembrane BMP regulator 1 protein-coding chr2-461 chr2 156334637 156334881 + 18.4 0.000 Intergenic CpG -2038 NM_173173 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr3-849 chr3 73624729 73624973 + 18.4 0.000 promoter-TSS (NM_015009) promoter-TSS (NM_015009) 90 NM_015009 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr9-1383 chr9 134291073 134291317 + 18.4 0.000 Intergenic Intergenic 4202 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr12-831 chr12 49796065 49796309 + 18.4 0.000 exon (NM_001368048, exon 9 of 14) exon (NM_001368048, exon 9 of 14) 32226 NM_001368048 57701 Hs.143067 NM_001037806 ENSG00000167566 NCKAP5L Cep169|FP1193|KIAA1602 NCK associated protein 5 like protein-coding chr3-256 chr3 141460132 141460376 + 18.4 0.000 Intergenic Intergenic -26773 NM_006506 5922 Hs.98445 NM_006506 ENSG00000155903 RASA2 GAP1M RAS p21 protein activator 2 protein-coding chr5-505 chr5 160419083 160419327 + 18.4 0.000 promoter-TSS (NM_001364521) promoter-TSS (NM_001364521) -124 NM_001364522 10569 Hs.435342 NM_006425 ENSG00000164609 SLU7 9G8|hSlu7 SLU7 homolog, splicing factor protein-coding chr10-1116 chr10 28730220 28730464 + 18.4 0.000 Intergenic Intergenic -13308 NR_120652 101929218 Hs.224866 NR_120652 LINC01517 - long intergenic non-protein coding RNA 1517 ncRNA chr16-690 chr16 89705982 89706226 + 18.4 0.000 Intergenic Intergenic -4399 NM_152339 124044 Hs.374556 NM_152339 ENSG00000158792 SPATA2L C16orf76|tamo spermatogenesis associated 2 like protein-coding chr20-284 chr20 62369144 62369388 + 18.4 0.000 Intergenic Intergenic -1954 NM_005560 3911 Hs.473256 NM_005560 ENSG00000130702 LAMA5 - laminin subunit alpha 5 protein-coding chr10-533 chr10 97333444 97333688 + 18.4 0.000 3' UTR (NM_012083, exon 1 of 1) 3' UTR (NM_012083, exon 1 of 1) 1163 NM_012083 23401 Hs.140720 NM_012083 ENSG00000181274 FRAT2 FRAT-2 FRAT regulator of WNT signaling pathway 2 protein-coding chr11-528 chr11 83316400 83316644 + 18.4 0.000 Intergenic SVA_D|Retroposon|SVA -30115 NM_001286118 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding chr17-879 chr17 68391336 68391580 + 18.4 0.000 intron (NM_001352899, intron 9 of 12) L3|LINE|CR1 -22165 NM_001278433 5573 Hs.280342 NM_002734 ENSG00000108946 PRKAR1A ACRDYS1|ADOHR|CAR|CNC|CNC1|PKR1|PPNAD1|PRKAR1|TSE1 protein kinase cAMP-dependent type I regulatory subunit alpha protein-coding chr7-804 chr7 1367244 1367488 + 18.4 0.000 Intergenic Intergenic 92104 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr5-1144 chr5 149302033 149302277 + 18.4 0.000 intron (NM_152406, intron 4 of 18) Charlie23a|DNA|hAT-Charlie 30296 NM_001323062 134265 Hs.62930 NM_152406 ENSG00000157510 AFAP1L1 - actin filament associated protein 1 like 1 protein-coding chr16-1149 chr16 67203847 67204091 + 18.4 0.000 TTS (NM_024712) TTS (NM_024712) -1574 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr13-106 chr13 112587547 112587791 + 18.4 0.000 intron (NM_006322, intron 1 of 21) CpG 484 NM_001286277 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding chr11-1215 chr11 117885173 117885417 + 18.4 0.000 Intergenic MIR3|SINE|MIR -7865 NM_001164831 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chr2-1982 chr2 237695111 237695355 + 18.4 0.000 intron (NM_001137551, intron 1 of 11) intron (NM_001137551, intron 1 of 11) 3028 NM_001137552 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr14-694 chr14 39372719 39372963 + 18.4 0.000 intron (NM_001354155, intron 22 of 22) intron (NM_001354155, intron 22 of 22) 59659 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding chr10-895 chr10 97612421 97612665 + 18.4 0.000 3' UTR (NM_001134670, exon 3 of 3) 3' UTR (NM_001134670, exon 3 of 3) 20957 NM_178832 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr2-894 chr2 15985261 15985505 + 18.4 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -42950 NR_161163 10408 Hs.651453 NR_110230 ENSG00000233718 MYCNOS MYCN-AS1|N-CYM|NCYM|NYCM MYCN opposite strand ncRNA chr1-2535 chr1 159923485 159923729 + 18.4 0.000 5' UTR (NM_001277224, exon 1 of 5) 5' UTR (NM_001277224, exon 1 of 5) 127 NM_001277224 8407 Hs.517168 NM_003564 ENSG00000158710 TAGLN2 HA1756 transgelin 2 protein-coding chr5-1100 chr5 130868356 130868600 + 18.4 0.000 Intergenic Intergenic 296778 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding chr10-370 chr10 73874386 73874630 + 18.4 0.000 promoter-TSS (NM_001367524) promoter-TSS (NM_001367524) 47 NM_172169 818 Hs.523045 NM_001222 ENSG00000148660 CAMK2G CAMK|CAMK-II|CAMKG calcium/calmodulin dependent protein kinase II gamma protein-coding chr17-869 chr17 57441223 57441467 + 18.4 0.000 intron (NM_001322250, intron 6 of 13) intron (NM_001322250, intron 6 of 13) 82252 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chr12-589 chr12 100142685 100142929 + 18.4 0.000 promoter-TSS (NM_015054) promoter-TSS (NM_015054) 67 NM_001006947 23074 Hs.572154 NM_015054 ENSG00000111647 UHRF1BP1L SHIP164 UHRF1 binding protein 1 like protein-coding chr10-830 chr10 45972244 45972488 + 18.4 0.000 promoter-TSS (NR_029388) promoter-TSS (NR_029388) 8 NR_160518 114004351 NR_160518 PARGP1-AGAP4 - PARGP1-AGAP4 readthrough pseudo chr2-1101 chr2 85785451 85785695 + 18.4 0.000 intron (NM_032827, intron 2 of 2) intron (NM_032827, intron 2 of 2) -1896 NR_106719 102466516 NR_106719 ENSG00000278783 MIR6071 hsa-mir-6071 microRNA 6071 ncRNA chrX-327 chrX 116306888 116307132 + 18.4 0.000 Intergenic L1MA2|LINE|L1 -129596 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding KI270744.1-2 KI270744.1 111627 111871 + 18.4 0.000 NA NA NA NA chr3-848 chr3 69386270 69386514 + 18.4 0.000 promoter-TSS (NM_015123) promoter-TSS (NM_015123) -304 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr9-1175 chr9 12882437 12882681 + 18.4 0.000 Intergenic Intergenic -68170 NR_125775 101929467 Hs.586443 NR_125775 ENSG00000235448 LURAP1L-AS1 - LURAP1L antisense RNA 1 ncRNA chr3-1277 chr3 48696459 48696703 + 18.4 0.000 intron (NM_016291, intron 1 of 5) intron (NM_016291, intron 1 of 5) -10666 NM_016453 51517 Hs.655006 NM_016453 ENSG00000213672 NCKIPSD AF3P21|DIP|DIP1|ORF1|SPIN90|VIP54|WASLBP|WISH NCK interacting protein with SH3 domain protein-coding chr19-469 chr19 46717118 46717362 + 18.4 0.000 promoter-TSS (NM_001079880) promoter-TSS (NM_001079880) -113 NM_016457 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chr4-528 chr4 81255654 81255898 + 18.4 0.000 Intergenic Intergenic -40554 NM_001282485 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding chr2-1531 chr2 172252602 172252846 + 18.4 0.000 Intergenic Intergenic 149718 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA chr9-858 chr9 18861887 18862131 + 18.4 0.000 intron (NM_001040272, intron 23 of 28) intron (NM_001040272, intron 23 of 28) 171200 NM_001287050 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr4-602 chr4 77820197 77820441 + 18.4 0.000 promoter-TSS (NM_001286790) promoter-TSS (NM_001286790) -50 NM_001365006 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr1-1210 chr1 186680400 186680644 + 18.4 0.000 promoter-TSS (NR_125801) promoter-TSS (NR_125801) -99 NM_000963 5743 Hs.196384 NM_000963 ENSG00000073756 PTGS2 COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 prostaglandin-endoperoxide synthase 2 protein-coding chr20-319 chr20 19332451 19332695 + 18.4 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -47977 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr3-1074 chr3 187738812 187739056 + 18.4 0.000 intron (NM_001706, intron 1 of 9) intron (NM_001706, intron 1 of 9) -2433 NM_001130845 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr1-2112 chr1 207007257 207007501 + 18.4 0.000 Intergenic Intergenic 25377 NM_001083924 79098 Hs.32417 NM_023938 ENSG00000182795 C1orf116 SARG chromosome 1 open reading frame 116 protein-coding chr10-1181 chr10 71349398 71349642 + 18.4 0.000 intron (NM_018344, intron 3 of 5) MLT1K|LTR|ERVL-MaLR 30261 NM_018344 55315 Hs.438419 NM_018344 ENSG00000198246 SLC29A3 ENT3|HCLAP|HJCD|PHID solute carrier family 29 member 3 protein-coding chr14-417 chr14 60980888 60981132 + 18.4 0.000 promoter-TSS (NM_001172702) promoter-TSS (NM_001172702) 69 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr1-1080 chr1 156901708 156901952 + 18.4 0.000 intron (NM_001080471, intron 1 of 22) intron (NM_001080471, intron 1 of 22) 8099 NM_001080471 375033 Hs.142003 NM_207369 ENSG00000187800 PEAR1 JEDI|MEGF12 platelet endothelial aggregation receptor 1 protein-coding chr11-893 chr11 61676525 61676769 + 18.4 0.000 Intergenic Intergenic -3744 NM_006133 747 Hs.241564 NM_006133 ENSG00000134780 DAGLA C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR diacylglycerol lipase alpha protein-coding chr19-1533 chr19 14510928 14511172 + 18.4 0.000 Intergenic AluSz|SINE|Alu 6812 NM_001300914 3337 Hs.515210 NM_006145 ENSG00000132002 DNAJB1 HSPF1|Hdj1|Hsp40|RSPH16B|Sis1 DnaJ heat shock protein family (Hsp40) member B1 protein-coding chr12-900 chr12 119802698 119802942 + 18.4 0.000 intron (NM_007174, intron 10 of 46) (GATA)n|Simple_repeat|Simple_repeat 74500 NM_001206999 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding chr5-1015 chr5 38866615 38866859 + 18.4 0.000 intron (NM_003999, intron 1 of 17) L1MA4A|LINE|L1 20725 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr20-448 chr20 54207873 54208117 + 18.4 0.000 promoter-TSS (NM_002623) promoter-TSS (NM_002623) -92 NM_002623 5203 Hs.91161 NM_002623 ENSG00000101132 PFDN4 C1|PFD4 prefoldin subunit 4 protein-coding chr17-890 chr17 77460222 77460466 + 18.4 0.000 intron (NM_001293698, intron 1 of 9) intron (NM_001293698, intron 1 of 9) 6317 NM_001293698 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr17-946 chr17 21099168 21099412 + 18.4 0.000 Intergenic Intergenic 23734 NR_110895 101060544 Hs.585812 NR_110895 ENSG00000236819 LINC01563 HP08942 long intergenic non-protein coding RNA 1563 ncRNA chr19-576 chr19 5709122 5709366 + 18.4 0.000 intron (NM_001276479, intron 5 of 18) AluSx1|SINE|Alu 10902 NM_001276479 9361 Hs.350265 NM_004793 ENSG00000196365 LONP1 CODASS|LON|LONP|LonHS|PIM1|PRSS15|hLON lon peptidase 1, mitochondrial protein-coding chr5-295 chr5 140175380 140175624 + 18.4 0.000 intron (NM_032412, intron 1 of 2) CpG 314 NM_032412 84418 Hs.529798 NM_032412 ENSG00000120306 CYSTM1 C5orf32|ORF1-FL49 cysteine rich transmembrane module containing 1 protein-coding chr9-1277 chr9 106491998 106492242 + 18.4 0.000 Intergenic LTR1A2|LTR|ERV1 -108808 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA chr13-302 chr13 20359385 20359629 + 18.4 0.000 Intergenic L1MB7|LINE|L1 74339 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr3-617 chr3 139310429 139310673 + 18.4 0.000 Intergenic Intergenic -33443 NM_001363893 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding chr17-1282 chr17 30570312 30570556 + 18.4 0.000 Intergenic Intergenic -6031 NR_015341 107133515 Hs.568209 NR_015341 SMURF2P1-LRRC37BP1 - SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene pseudo chr3-859 chr3 120429057 120429301 + 18.4 0.000 intron (NM_007085, intron 2 of 10) intron (NM_007085, intron 2 of 10) 21813 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr17-909 chr17 859449 859693 + 18.4 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 4540 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr15-746 chr15 96059998 96060242 + 18.4 0.000 Intergenic Intergenic 67721 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA chr5-926 chr5 135245804 135246048 + 18.4 0.000 intron (NR_037895, intron 2 of 3) intron (NR_037895, intron 2 of 3) 2251 NR_037895 340073 Hs.434422 NR_037895 ENSG00000249647 C5orf66-AS2 - C5orf66 antisense RNA 2 ncRNA chr12-1021 chr12 132838138 132838382 + 18.4 0.000 Intergenic Intergenic -9391 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr12-1167 chr12 79515364 79515608 + 18.4 0.000 Intergenic L1M3b|LINE|L1 96229 NR_031700 100302136 NR_031700 ENSG00000221788 MIR1252 MIRN1252|hsa-mir-1252 microRNA 1252 ncRNA chrX-471 chrX 64180190 64180434 + 18.4 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 25396 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding chr21-224 chr21 26405811 26406055 + 18.4 0.000 promoter-TSS (NR_135515) promoter-TSS (NR_135515) -10 NR_135515 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA chr19-811 chr19 19199367 19199611 + 18.4 0.000 intron (NM_001370235, intron 9 of 9) intron (NM_001370235, intron 9 of 9) 3925 NM_176880 126382 Hs.708153 NM_176880 ENSG00000184162 NR2C2AP TRA16 nuclear receptor 2C2 associated protein protein-coding chr5-343 chr5 131796420 131796664 + 18.4 0.000 intron (NM_133372, intron 1 of 17) CpG 475 NM_001008738 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding KI270736.1-3 KI270736.1 171226 171470 + 18.4 0.000 NA NA NA NA chr22-242 chr22 35350670 35350914 + 18.4 0.000 Intergenic Intergenic -13993 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr11-1295 chr11 61628412 61628656 + 18.4 0.000 intron (NR_002775, intron 2 of 4) intron (NR_002775, intron 2 of 4) 13498 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr16-871 chr16 85136614 85136858 + 18.4 0.000 promoter-TSS (NR_033984) promoter-TSS (NR_033984) -414 NR_033984 400548 Hs.592054 NR_033984 ENSG00000278214 LINC02139 - long intergenic non-protein coding RNA 2139 ncRNA chr7-886 chr7 1523549 1523793 + 18.4 0.000 Intergenic Intergenic -7031 NM_002360 7975 Hs.520612 NM_002360 ENSG00000198517 MAFK NFE2U|P18 MAF bZIP transcription factor K protein-coding chr11-1052 chr11 2452345 2452589 + 18.4 0.000 intron (NM_000218, intron 1 of 15) intron (NM_000218, intron 1 of 15) 7476 NM_000218 3784 Hs.95162 NM_000218 ENSG00000053918 KCNQ1 ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS potassium voltage-gated channel subfamily Q member 1 protein-coding chr20-447 chr20 53866142 53866386 + 18.4 0.000 Intergenic Intergenic 9445 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr2-704 chr2 201208882 201209126 + 18.4 0.000 intron (NM_032977, intron 8 of 9) (TTTTTC)n|Simple_repeat|Simple_repeat -24439 NM_033355 841 Hs.599762 NM_001228 ENSG00000064012 CASP8 ALPS2B|CAP4|Casp-8|FLICE|MACH|MCH5 caspase 8 protein-coding chr16-1073 chr16 11834363 11834607 + 18.4 0.000 3' UTR (NM_015659, exon 9 of 9) 3' UTR (NM_015659, exon 9 of 9) -5653 NR_131222 400500 Hs.24611 NR_024049 ENSG00000262117 BCAR4 - breast cancer anti-estrogen resistance 4 ncRNA chr14-802 chr14 103708031 103708275 + 18.4 0.000 intron (NM_001371232, intron 5 of 9) intron (NM_001371232, intron 5 of 9) 7298 NM_001371231 chr11-833 chr11 124481723 124481967 + 18.4 0.000 Intergenic Intergenic -40760 NM_012378 26493 Hs.351822 NM_012378 ENSG00000197125 OR8B8 TPCR85 olfactory receptor family 8 subfamily B member 8 protein-coding chr3-1230 chr3 20995969 20996213 + 18.4 0.000 Intergenic Intergenic -409635 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr12-534 chr12 69007069 69007313 + 18.4 0.000 Intergenic Intergenic -43951 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr1-1767 chr1 55050408 55050652 + 18.4 0.000 intron (NM_174936, intron 3 of 11) intron (NM_174936, intron 3 of 11) 10308 NR_110451 255738 Hs.18844 NM_174936 ENSG00000169174 PCSK9 FH3|HCHOLA3|LDLCQ1|NARC-1|NARC1|PC9 proprotein convertase subtilisin/kexin type 9 protein-coding chr19-1639 chr19 46726593 46726837 + 18.4 0.000 intron (NM_001039877, intron 9 of 17) intron (NM_001039877, intron 9 of 17) -9588 NM_016457 25865 Hs.466987 NM_016457 ENSG00000105287 PRKD2 HSPC187|PKD2|nPKC-D2 protein kinase D2 protein-coding chr7-1251 chr7 30285849 30286093 + 18.4 0.000 intron (NM_147128, intron 1 of 4) CpG 114 NR_136267 105375218 Hs.566765 NR_136267 LOC105375218 - uncharacterized LOC105375218 ncRNA chr20-270 chr20 37528095 37528339 + 18.4 0.000 promoter-TSS (NM_006698) promoter-TSS (NM_006698) -286 NM_001167820 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr14-532 chr14 53152292 53152536 + 18.4 0.000 promoter-TSS (NR_110062) promoter-TSS (NR_110062) 909 NM_030637 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding chr13-161 chr13 113863540 113863784 + 18.4 0.000 promoter-TSS (NR_044993) promoter-TSS (NR_044993) 414 NM_000820 2621 Hs.646346 NM_000820 ENSG00000183087 GAS6 AXLLG|AXSF growth arrest specific 6 protein-coding chr9-1237 chr9 84453504 84453748 + 18.4 0.000 Intergenic Intergenic -84899 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr17-688 chr17 35432419 35432663 + 18.4 0.000 promoter-TSS (NM_018042) promoter-TSS (NM_018042) -41 NM_018042 55106 Hs.663548 NM_018042 ENSG00000172123 SLFN12 SLFN3 schlafen family member 12 protein-coding chr2-1749 chr2 85215724 85215968 + 18.4 0.000 intron (NR_136323, intron 1 of 2) intron (NR_136323, intron 1 of 2) 2194 NR_136323 102724579 Hs.669216 NR_136323 LOC102724579 - uncharacterized LOC102724579 ncRNA chr16-365 chr16 29131313 29131557 + 18.4 0.000 Intergenic Intergenic 56593 NR_003369 653390 Hs.720348 NR_003369 ENSG00000103472 RRN3P2 - RRN3 homolog, RNA polymerase I transcription factor pseudogene 2 pseudo chr16-1115 chr16 52726698 52726942 + 18.4 0.000 Intergenic Intergenic -119845 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA chr8-476 chr8 23366489 23366733 + 18.4 0.000 TTS (NR_038323) TTS (NR_038323) 30403 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr17-1099 chr17 2214197 2214441 + 18.4 0.000 intron (NM_001256827, intron 3 of 11) intron (NM_001256827, intron 3 of 11) -18359 NR_110888 101927839 Hs.665648 NR_110888 ENSG00000225084 LOC101927839 - uncharacterized LOC101927839 ncRNA chr7-1451 chr7 155439185 155439429 + 18.4 0.000 Intergenic Intergenic -18822 NM_001427 2020 Hs.134989 NM_001427 ENSG00000164778 EN2 - engrailed homeobox 2 protein-coding chr4-1099 chr4 168560692 168560936 + 18.3 0.000 intron (NM_001166108, intron 2 of 21) intron (NM_001166108, intron 2 of 21) 63762 NM_001166108 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr6-547 chr6 121507240 121507484 + 18.3 0.000 Intergenic Intergenic 71716 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chrX-67 chrX 155216764 155217008 + 18.3 0.000 intron (NM_001303545, intron 1 of 5) intron (NM_001303545, intron 1 of 5) 426 NM_003372 7411 Hs.436803 NM_003372 ENSG00000155959 VBP1 HIBBJ46|PFD3|PFDN3|VBP-1 VHL binding protein 1 protein-coding chr17-715 chr17 80482839 80483083 + 18.3 0.000 Intergenic Intergenic -6354 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr6-382 chr6 26607453 26607697 + 18.3 0.000 Intergenic LTR50|LTR|ERVL 10622 NM_013375 29777 Hs.254406 NM_013375 ENSG00000146109 ABT1 Esf2|hABT1 activator of basal transcription 1 protein-coding chr11-400 chr11 115147563 115147807 + 18.3 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -185892 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr7-667 chr7 156893061 156893305 + 18.3 0.000 promoter-TSS (NM_001350956) promoter-TSS (NM_001350956) 0 NM_001350953 64327 Hs.209989 NM_022458 ENSG00000105983 LMBR1 ACHP|C7orf2|DIF14|LSS|PPD2|THYP|TPT|ZRS limb development membrane protein 1 protein-coding chr6-608 chr6 84027841 84028085 + 18.3 0.000 Intergenic Intergenic -5809 NM_138409 112609 Hs.370055 NM_138409 ENSG00000135324 MRAP2 C6orf117|bA51G5.2 melanocortin 2 receptor accessory protein 2 protein-coding chr11-1429 chr11 16776768 16777012 + 18.3 0.000 TTS (NM_001329630) TTS (NM_001329630) 38243 NM_014267 10944 Hs.368226 NM_014267 ENSG00000110696 C11orf58 IMAGE145052|SMAP chromosome 11 open reading frame 58 protein-coding chr11-943 chr11 103091465 103091709 + 18.3 0.000 intron (NM_001318740, intron 1 of 6) CpG 573 NM_001318739 84259 Hs.503716 NM_032299 ENSG00000137692 DCUN1D5 SCCRO5 defective in cullin neddylation 1 domain containing 5 protein-coding chr2-612 chr2 63050260 63050504 + 18.3 0.000 promoter-TSS (NM_014562) promoter-TSS (NM_014562) 325 NM_001199770 5013 Hs.734360 NM_014562 ENSG00000115507 OTX1 - orthodenticle homeobox 1 protein-coding chr6-1009 chr6 74856975 74857219 + 18.3 0.000 Intergenic AluSz|SINE|Alu 271685 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA chr15-251 chr15 100765144 100765388 + 18.3 0.000 Intergenic Intergenic -84486 NR_160703 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA chr9-1001 chr9 133979334 133979578 + 18.3 0.000 intron (NM_001134398, intron 1 of 29) CpG 12868 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr14-79 chr14 72682121 72682365 + 18.3 0.000 intron (NM_001280544, intron 7 of 9) intron (NM_001280544, intron 7 of 9) 165423 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chrX-526 chrX 116379923 116380167 + 18.3 0.000 Intergenic Intergenic -56561 NM_007231 11254 Hs.522109 NM_007231 ENSG00000268104 SLC6A14 BMIQ11 solute carrier family 6 member 14 protein-coding chr11-1346 chr11 100719815 100720059 + 18.3 0.000 intron (NM_001367945, intron 1 of 25) intron (NM_001367945, intron 1 of 25) -31982 NR_133571 100128386 Hs.635125 NR_133571 ENSG00000248027 LOC100128386 - uncharacterized LOC100128386 ncRNA chr1-1433 chr1 205679973 205680217 + 18.3 0.000 intron (NM_033102, intron 1 of 4) CpG 414 NM_033102 85414 Hs.278695 NM_033102 ENSG00000158715 SLC45A3 IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST solute carrier family 45 member 3 protein-coding chr17-926 chr17 7019883 7020127 + 18.3 0.000 promoter-TSS (NR_038310) promoter-TSS (NR_038310) -351 NR_038310 100506755 Hs.710442 NR_038310 ENSG00000267532 MIR497HG MIR195HG mir-497-195 cluster host gene ncRNA chr3-626 chr3 170180979 170181223 + 18.3 0.000 intron (NM_024947, intron 1 of 14) intron (NM_024947, intron 1 of 14) 632 NM_024947 80012 Hs.529592 NM_024947 ENSG00000173889 PHC3 EDR3|HPH3 polyhomeotic homolog 3 protein-coding chr8-557 chr8 38405344 38405588 + 18.3 0.000 intron (NM_001199660, intron 8 of 10) intron (NM_001199660, intron 8 of 10) 18335 NM_001199660 137994 Hs.696457 NM_144652 ENSG00000165046 LETM2 SLC55A2 leucine zipper and EF-hand containing transmembrane protein 2 protein-coding chr17-477 chr17 19003071 19003315 + 18.3 0.000 intron (NM_001039999, intron 2 of 5) intron (NM_001039999, intron 2 of 5) 1571 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr9-533 chr9 101449175 101449419 + 18.3 0.000 Intergenic CpG -13523 NM_000035 229 Hs.530274 NM_000035 ENSG00000136872 ALDOB ALDB|ALDO2 aldolase, fructose-bisphosphate B protein-coding chr9-1292 chr9 113620352 113620596 + 18.3 0.000 Intergenic MIR3|SINE|MIR 26345 NM_001276262 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr18-317 chr18 23838413 23838657 + 18.3 0.000 intron (NM_001127717, intron 25 of 73) intron (NM_001127717, intron 25 of 73) -34485 NM_000227 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr17-708 chr17 76017760 76018004 + 18.3 0.000 exon (NM_001320747, exon 14 of 22) exon (NM_001320747, exon 14 of 22) 9424 NM_001320747 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr13-194 chr13 110012186 110012430 + 18.3 0.000 Intergenic Intergenic -40977 NR_126387 104355146 Hs.508690 NR_126387 ENSG00000231428 LINC00396 - long intergenic non-protein coding RNA 396 ncRNA chr1-1684 chr1 22344914 22345158 + 18.3 0.000 Intergenic Intergenic 78797 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr17-741 chr17 6575189 6575433 + 18.3 0.000 Intergenic Intergenic -18756 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr6-1037 chr6 105609004 105609248 + 18.3 0.000 Intergenic Intergenic -206044 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding chr1-2444 chr1 93613896 93614140 + 18.3 0.000 promoter-TSS (NM_001261410) promoter-TSS (NM_001261410) 79 NM_001261410 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding KI270337.1-1 KI270337.1 334 578 + 18.3 0.000 NA NA NA NA chr22-459 chr22 45922843 45923087 + 18.3 0.000 exon (NM_058238, exon 4 of 4) exon (NM_058238, exon 4 of 4) 54197 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr18-148 chr18 59899958 59900202 + 18.3 0.000 promoter-TSS (NM_021127) promoter-TSS (NM_021127) 84 NM_021127 5366 Hs.96 NM_021127 ENSG00000141682 PMAIP1 APR|NOXA phorbol-12-myristate-13-acetate-induced protein 1 protein-coding chr9-1223 chr9 77495960 77496204 + 18.3 0.000 intron (NR_121184, intron 2 of 4) intron (NR_121184, intron 2 of 4) 48433 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA chr11-1578 chr11 72635109 72635353 + 18.3 0.000 intron (NM_001243784, intron 1 of 30) intron (NM_001243784, intron 1 of 30) 7212 NM_001143839 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr6-1045 chr6 110285675 110285919 + 18.3 0.000 intron (NM_001123364, intron 4 of 4) intron (NM_001123364, intron 4 of 4) 44261 NM_001354595 728464 Hs.634429 NM_001123364 ENSG00000053328 METTL24 C6orf186 methyltransferase like 24 protein-coding chr8-311 chr8 127810803 127811047 + 18.3 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 14963 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr2-1119 chr2 127408361 127408605 + 18.3 0.000 Intergenic CpG -9937 NM_000312 5624 Hs.224698 NM_000312 ENSG00000115718 PROC APC|PC|PROC1|THPH3|THPH4 protein C, inactivator of coagulation factors Va and VIIIa protein-coding chr4-675 chr4 19005128 19005372 + 18.3 0.000 Intergenic Intergenic -983375 NM_001365660 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding chr5-494 chr5 142013037 142013281 + 18.3 0.000 promoter-TSS (NM_005471) promoter-TSS (NM_005471) -132 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr1-820 chr1 27504362 27504606 + 18.3 0.000 Intergenic Intergenic -14317 NM_001201404 10163 Hs.469244 NM_006990 ENSG00000158195 WASF2 IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 WASP family member 2 protein-coding chr16-748 chr16 86032607 86032851 + 18.3 0.000 Intergenic Intergenic 114382 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr11-1304 chr11 63915249 63915493 + 18.3 0.000 intron (NM_173587, intron 2 of 11) intron (NM_173587, intron 2 of 11) 1793 NM_173587 283248 Hs.98788 NM_173587 ENSG00000167771 RCOR2 - REST corepressor 2 protein-coding chr20-334 chr20 38322053 38322297 + 18.3 0.000 intron (NM_001725, intron 7 of 14) L1ME4a|LINE|L1 18025 NM_001725 671 Hs.529019 NM_001725 ENSG00000101425 BPI BPIFD1|rBPI bactericidal permeability increasing protein protein-coding chr10-1303 chr10 120477065 120477309 + 18.3 0.000 intron (NR_134516, intron 2 of 4) intron (NR_134516, intron 2 of 4) 20233 NM_001318169 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr15-337 chr15 78389546 78389790 + 18.3 0.000 Intergenic Intergenic -47763 NM_001354994 3658 Hs.436031 NM_004136 ENSG00000136381 IREB2 ACO3|IRE-BP 2|IRE-BP2|IRP2|IRP2AD|NDCAMA iron responsive element binding protein 2 protein-coding chr1-2382 chr1 52238139 52238383 + 18.3 0.000 exon (NM_004799, exon 4 of 19) exon (NM_004799, exon 4 of 19) 96167 NM_004799 9372 Hs.532345 NM_004799 ENSG00000157077 ZFYVE9 MADHIP|NSP|PPP1R173|SARA|SMADIP zinc finger FYVE-type containing 9 protein-coding chr1-2546 chr1 163882666 163882910 + 18.3 0.000 Intergenic Intergenic -459597 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr11-1579 chr11 72654952 72655196 + 18.3 0.000 intron (NM_002599, intron 1 of 30) intron (NM_002599, intron 1 of 30) -12614 NM_001243784 5138 Hs.503163 NM_002599 ENSG00000186642 PDE2A CGS-PDE|PDE2A1|PED2A4|cGSPDE phosphodiesterase 2A protein-coding chr8-929 chr8 100714250 100714494 + 18.3 0.000 intron (NM_002568, intron 4 of 14) intron (NM_002568, intron 4 of 14) 7716 NM_002568 26986 Hs.387804 NM_002568 ENSG00000070756 PABPC1 PAB1|PABP|PABP1|PABPC2|PABPL1 poly(A) binding protein cytoplasmic 1 protein-coding chr20-120 chr20 37000853 37001097 + 18.3 0.000 intron (NM_002895, intron 21 of 21) SVA_D|Retroposon|SVA -49132 NM_015474 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr1-1271 chr1 10653424 10653668 + 18.3 0.000 exon (NM_017766, exon 11 of 16) exon (NM_017766, exon 11 of 16) 143100 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr11-592 chr11 894411 894655 + 18.3 0.000 intron (NM_023947, intron 7 of 12) intron (NM_023947, intron 7 of 12) 16277 NM_023947 66005 Hs.144468 NM_023947 ENSG00000177830 CHID1 GL008|SI-CLP|SICLP chitinase domain containing 1 protein-coding chr10-191 chr10 122112841 122113085 + 18.3 0.000 promoter-TSS (NM_001291879) promoter-TSS (NM_001291879) 78 NM_001291879 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr1-842 chr1 54253569 54253813 + 18.3 0.000 intron (NM_018070, intron 6 of 16) intron (NM_018070, intron 6 of 16) 17248 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr16-863 chr16 82597486 82597730 + 18.3 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -29361 NM_001220491 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr3-221 chr3 184336062 184336306 + 18.3 0.000 TTS (NM_001291157) TTS (NM_001291157) 255 NM_001171093 131408 Hs.591307 NM_144635 ENSG00000175182 FAM131A C3orf40|FLAT715|PRO1378 family with sequence similarity 131 member A protein-coding chr21-204 chr21 32371936 32372180 + 18.3 0.000 intron (NM_014825, intron 8 of 38) MIR|SINE|MIR 5264 NR_002996 677846 Hs.712293 NR_002996 ENSG00000200792 SNORA80A ACA67|SNORA80 small nucleolar RNA, H/ACA box 80A snoRNA chr1-2213 chr1 8510181 8510425 + 18.3 0.000 intron (NM_001042681, intron 7 of 22) intron (NM_001042681, intron 7 of 22) -15390 NR_132752 106632271 NR_132752 SNORD128 ZL43 small nucleolar RNA, C/D box 128 snoRNA chr18-229 chr18 26226129 26226373 + 18.3 0.000 promoter-TSS (NR_121653) promoter-TSS (NR_121653) -194 NM_001293725 6875 Hs.369519 NM_005640 ENSG00000141384 TAF4B SPGF13|TAF2C2|TAFII105 TATA-box binding protein associated factor 4b protein-coding chr16-648 chr16 31472910 31473154 + 18.3 0.000 promoter-TSS (NM_015927) promoter-TSS (NM_015927) -173 NM_015927 7041 Hs.513530 NM_015927 ENSG00000140682 TGFB1I1 ARA55|HIC-5|HIC5|TSC-5 transforming growth factor beta 1 induced transcript 1 protein-coding chr3-1096 chr3 12187983 12188227 + 18.3 0.000 intron (NM_133625, intron 12 of 12) intron (NM_133625, intron 12 of 12) -29193 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr11-344 chr11 131896488 131896732 + 18.3 0.000 intron (NM_001352006, intron 2 of 9) MER20B|DNA|hAT-Charlie -13314 NR_147850 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr1-2373 chr1 46402251 46402495 + 18.3 0.000 intron (NM_001441, intron 2 of 14) intron (NM_001441, intron 2 of 14) 8056 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr9-903 chr9 83304759 83305003 + 18.3 0.000 intron (NM_001244960, intron 10 of 13) intron (NM_001244960, intron 10 of 13) 27080 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr4-433 chr4 143184865 143185109 + 18.3 0.000 promoter-TSS (NR_136203) promoter-TSS (NR_136203) 70 NM_001290326 84640 Hs.480848 NM_032557 ENSG00000170185 USP38 HP43.8KD ubiquitin specific peptidase 38 protein-coding chr11-865 chr11 14644189 14644433 + 18.3 0.000 promoter-TSS (NM_148976) promoter-TSS (NM_148976) 507 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr14-421 chr14 68790901 68791145 + 18.3 0.000 intron (NM_001244701, intron 2 of 2) intron (NM_001244701, intron 2 of 2) 2891 NM_001244698 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding chr22-742 chr22 49470130 49470374 + 18.3 0.000 intron (NR_110523, intron 1 of 4) intron (NR_110523, intron 1 of 4) 73214 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA chr17-546 chr17 17683071 17683315 + 18.3 0.000 intron (NM_030665, intron 1 of 5) intron (NM_030665, intron 1 of 5) 1735 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr8-855 chr8 41262167 41262411 + 18.3 0.000 3' UTR (NM_003012, exon 3 of 3) 3' UTR (NM_003012, exon 3 of 3) 8854 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr6-293 chr6 132679143 132679387 + 18.3 0.000 Intergenic L1PA16|LINE|L1 -33239 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding chr19-832 chr19 49361761 49362005 + 18.3 0.000 promoter-TSS (NM_001256661) promoter-TSS (NM_001256661) -366 NM_001256661 8463 Hs.515534 NM_003598 ENSG00000074219 TEAD2 ETF|TEAD-2|TEF-4|TEF4 TEA domain transcription factor 2 protein-coding chr1-2084 chr1 161201772 161202016 + 18.3 0.000 promoter-TSS (NM_001166159) promoter-TSS (NM_001166159) -253 NM_001166159 4720 Hs.173611 NM_004550 ENSG00000158864 NDUFS2 CI-49|MC1DN6 NADH:ubiquinone oxidoreductase core subunit S2 protein-coding chr11-1396 chr11 2310959 2311203 + 18.3 0.000 intron (NM_139022, intron 4 of 9) intron (NM_139022, intron 4 of 9) -7941 NR_138249 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr12-89 chr12 39443237 39443481 + 18.3 0.000 promoter-TSS (NM_001173463) promoter-TSS (NM_001173463) -239 NM_001173465 55605 Hs.374201 NM_017641 ENSG00000139116 KIF21A CFEOM1|FEOM1|FEOM3A kinesin family member 21A protein-coding chr9-1257 chr9 95038115 95038359 + 18.3 0.000 intron (NM_032823, intron 11 of 14) intron (NM_032823, intron 11 of 14) -27113 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA chr11-1593 chr11 74942899 74943143 + 18.3 0.000 intron (NM_001270380, intron 2 of 14) intron (NM_001270380, intron 2 of 14) 6070 NM_182969 143570 Hs.370145 NM_182969 ENSG00000166435 XRRA1 - X-ray radiation resistance associated 1 protein-coding chr16-728 chr16 58471945 58472189 + 18.3 0.000 intron (NM_022910, intron 1 of 15) intron (NM_022910, intron 1 of 15) 7245 NM_022910 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr11-1635 chr11 110296300 110296544 + 18.3 0.000 intron (NM_001260493, intron 1 of 15) CpG 290 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding chr4-1109 chr4 177229359 177229603 + 18.3 0.000 Intergenic Intergenic -80393 NM_018248 55247 Hs.405467 NM_018248 ENSG00000109674 NEIL3 FGP2|FPG2|NEI3|ZGRF3|hFPG2|hNEI3 nei like DNA glycosylase 3 protein-coding chr22-336 chr22 43002079 43002323 + 18.3 0.000 intron (NM_001184970, intron 1 of 10) intron (NM_001184970, intron 1 of 10) 12948 NM_001184970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr4-731 chr4 109442143 109442387 + 18.3 0.000 intron (NM_001042734, intron 1 of 22) MamRep38|DNA|hAT -8448 NR_039978 100533182 Hs.518927 NR_039978 ENSG00000247950 SEC24B-AS1 1/2-SBSRNA4 SEC24B antisense RNA 1 ncRNA chr20-436 chr20 45416102 45416346 + 18.3 0.000 promoter-TSS (NR_047691) promoter-TSS (NR_047691) 83 NM_001184729 51604 Hs.437388 NM_015937 ENSG00000124155 PIGT CGI-06|MCAHS3|NDAP|PNH2 phosphatidylinositol glycan anchor biosynthesis class T protein-coding chr9-851 chr9 8878742 8878986 + 18.3 0.000 intron (NM_002839, intron 11 of 45) intron (NM_002839, intron 11 of 45) 20846 NR_121599 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA chr12-1183 chr12 95473177 95473421 + 18.3 0.000 promoter-TSS (NM_001330246) promoter-TSS (NM_001330246) -853 NM_006838 10988 Hs.444986 NM_006838 ENSG00000111142 METAP2 MAP2|MNPEP|p67eIF2 methionyl aminopeptidase 2 protein-coding chr13-298 chr13 108859614 108859858 + 18.3 0.000 intron (NM_015011, intron 11 of 34) intron (NM_015011, intron 11 of 34) 230125 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding chr15-448 chr15 33898116 33898360 + 18.3 0.000 intron (NM_020371, intron 2 of 5) intron (NM_020371, intron 2 of 5) -70259 NM_001320917 1133 Hs.584747 NM_012125 ENSG00000184984 CHRM5 HM5 cholinergic receptor muscarinic 5 protein-coding chr12-497 chr12 1526418 1526662 + 18.3 0.000 Intergenic Intergenic 5652 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr4-383 chr4 155376604 155376848 + 18.3 0.000 intron (NM_001039580, intron 1 of 13) CpG 239 NM_001039580 79884 Hs.61271 NM_001039580 ENSG00000164114 MAP9 ASAP microtubule associated protein 9 protein-coding chr15-243 chr15 82046975 82047219 + 18.3 0.000 Intergenic CpG-8510 -1079 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding chr20-621 chr20 50166142 50166386 + 18.3 0.000 Intergenic Intergenic -6306 NR_109943 101927541 Hs.570391 NR_109943 ENSG00000231742 LINC01273 - long intergenic non-protein coding RNA 1273 ncRNA chr8-763 chr8 94101162 94101406 + 18.3 0.000 Intergenic Intergenic 107271 NM_004063 1015 Hs.591853 NM_004063 ENSG00000079112 CDH17 CDH16|HPT-1|HPT1 cadherin 17 protein-coding chr3-1401 chr3 128794991 128795235 + 18.3 0.000 intron (NM_004637, intron 1 of 5) intron (NM_004637, intron 1 of 5) -51695 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr11-1492 chr11 57646875 57647119 + 18.3 0.000 exon (NM_001363487, exon 3 of 6) exon (NM_001363487, exon 3 of 6) 2915 NM_145008 219539 Hs.135978 NM_145008 ENSG00000166793 YPEL4 - yippee like 4 protein-coding chr12-1136 chr12 57218618 57218862 + 18.3 0.000 intron (NM_007224, intron 1 of 1) intron (NM_007224, intron 1 of 1) 1946 NM_007224 11247 Hs.745023 NM_007224 ENSG00000182379 NXPH4 NPH4 neurexophilin 4 protein-coding chr6-652 chr6 7157912 7158156 + 18.3 0.000 intron (NM_001003699, intron 1 of 12) intron (NM_001003699, intron 1 of 12) 50073 NM_001003699 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr1-1456 chr1 236604536 236604780 + 18.3 0.000 promoter-TSS (NM_018072) promoter-TSS (NM_018072) -142 NM_018072 55127 Hs.708114 NM_018072 ENSG00000119285 HEATR1 BAP28|UTP10 HEAT repeat containing 1 protein-coding chr17-851 chr17 32009061 32009305 + 18.3 0.000 intron (NM_001321350, intron 1 of 14) L1MD|LINE|L1 1800 NM_001321350 114659 Hs.514071 NM_052888 ENSG00000185158 LRRC37B LRRC37 leucine rich repeat containing 37B protein-coding chr22-717 chr22 43670211 43670455 + 18.3 0.000 intron (NM_198856, intron 13 of 29) Charlie1b|DNA|hAT-Charlie 141972 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr12-1066 chr12 23099852 23100096 + 18.3 0.000 Intergenic L2a|LINE|L2 -75662 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA chr6-90 chr6 99515511 99515755 + 18.3 0.000 promoter-TSS (NM_001346030) promoter-TSS (NM_001346030) -144 NM_032929 85015 Hs.143410 NM_032929 ENSG00000123552 USP45 - ubiquitin specific peptidase 45 protein-coding chr5-879 chr5 56950682 56950926 + 18.3 0.000 intron (NM_001297598, intron 1 of 12) CpG 1326 NM_001297599 166968 Hs.657594 NM_152622 ENSG00000155545 MIER3 - MIER family member 3 protein-coding chr3-1350 chr3 88707780 88708024 + 18.3 0.000 Intergenic Intergenic 369446 NM_001368167 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding chr13-502 chr13 91919818 91920062 + 18.3 0.000 intron (NM_004466, intron 6 of 7) HAL1|LINE|L1 432267 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr5-1042 chr5 58599338 58599582 + 18.3 0.000 intron (NM_138453, intron 1 of 4) intron (NM_138453, intron 1 of 4) 16385 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding chr21-72 chr21 17849233 17849477 + 18.3 0.000 intron (NR_024354, intron 1 of 2) intron (NR_024354, intron 1 of 2) -29999 NM_017447 54149 Hs.293811 NM_017447 ENSG00000154642 C21orf91 C21orf14|C21orf38|CSSG1|EURL|YG81 chromosome 21 open reading frame 91 protein-coding chr14-610 chr14 24773435 24773679 + 18.3 0.000 Intergenic L1PA7|LINE|L1 -139367 NM_001346011 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding chr10-783 chr10 5888828 5889072 + 18.3 0.000 promoter-TSS (NM_001258452) promoter-TSS (NM_001258452) -622 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chr11-906 chr11 64790407 64790651 + 18.3 0.000 intron (NM_001307990, intron 27 of 31) intron (NM_001307990, intron 27 of 31) -11685 NM_201995 7536 Hs.502829 NM_004630 ENSG00000168066 SF1 BBP|D11S636|MBBP|ZCCHC25|ZFM1|ZNF162 splicing factor 1 protein-coding chr19-1381 chr19 45493386 45493630 + 18.3 0.000 promoter-TSS (NM_206901) promoter-TSS (NM_206901) -255 NM_206901 6253 Hs.47517 NM_005619 ENSG00000125744 RTN2 NSP2|NSPL1|NSPLI|SPG12 reticulon 2 protein-coding chr2-1650 chr2 28392236 28392480 + 18.3 0.000 promoter-TSS (NM_005253) promoter-TSS (NM_005253) -500 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr6-713 chr6 108581657 108581901 + 18.3 0.000 intron (NM_201559, intron 2 of 3) intron (NM_201559, intron 2 of 3) 20862 NM_001455 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr20-626 chr20 51360561 51360805 + 18.3 0.000 Intergenic Intergenic 92294 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr19-1556 chr19 18845431 18845675 + 18.3 0.000 intron (NM_002911, intron 1 of 23) intron (NM_002911, intron 1 of 23) 13594 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr7-937 chr7 42097755 42097999 + 18.3 0.000 intron (NM_000168, intron 3 of 14) intron (NM_000168, intron 3 of 14) 139332 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding chr17-754 chr17 28958988 28959232 + 18.3 0.000 exon (NM_178860, exon 10 of 17) exon (NM_178860, exon 10 of 17) -7592 NM_020889 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding chr18-239 chr18 46418941 46419185 + 18.3 0.000 intron (NM_001256758, intron 1 of 5) MamTip2|DNA|hAT-Tip100 84839 NM_001256758 494470 Hs.501114 NM_152470 ENSG00000141622 RNF165 ARKL2|Ark2C|RNF111L2 ring finger protein 165 protein-coding chr6-987 chr6 45116572 45116816 + 18.3 0.000 intron (NM_001350325, intron 2 of 10) intron (NM_001350325, intron 2 of 10) 81076 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA chr14-786 chr14 102063171 102063415 + 18.3 0.000 Intergenic Intergenic 23751 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr10-541 chr10 102422116 102422360 + 18.3 0.000 exon (NM_024326, exon 3 of 4) exon (NM_024326, exon 3 of 4) -2304 NM_001270965 5662 Hs.154658 NM_002779 ENSG00000059915 PSD EFA6|EFA6A|PSD1|TYL pleckstrin and Sec7 domain containing protein-coding chr12-250 chr12 109880424 109880668 + 18.3 0.000 promoter-TSS (NM_016433) promoter-TSS (NM_016433) -5 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr17-1123 chr17 31582161 31582405 + 18.3 0.000 Intergenic Intergenic 6872 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA chr14-305 chr14 103679412 103679656 + 18.1 0.000 exon (NM_005552, exon 13 of 15) exon (NM_005552, exon 13 of 15) 35917 NM_001371231 chr7-874 chr7 597980 598224 + 18.1 0.000 intron (NM_001164760, intron 6 of 10) intron (NM_001164760, intron 6 of 10) -4743 NR_110054 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA chr3-1501 chr3 194764510 194764754 + 18.1 0.000 TTS (NR_146990) TTS (NR_146990) 4077 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA chr13-56 chr13 45340552 45340796 + 18.1 0.000 promoter-TSS (NR_024458) promoter-TSS (NR_024458) 509 NM_001286273 7178 Hs.374596 NM_003295 ENSG00000133112 TPT1 HRF|TCTP|p02|p23 tumor protein, translationally-controlled 1 protein-coding chr3-1236 chr3 24847352 24847596 + 18.1 0.000 intron (NM_001290216, intron 1 of 10) intron (NM_001290216, intron 1 of 10) 18151 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding chr6-610 chr6 85403549 85403793 + 18.1 0.000 intron (NR_134633, intron 2 of 3) intron (NR_134633, intron 2 of 3) 1131 NR_134633 101928820 Hs.587370 NR_134633 ENSG00000234155 LINC02535 - long intergenic non-protein coding RNA 2535 ncRNA chr7-870 chr7 156949289 156949533 + 18.1 0.000 promoter-TSS (NM_138400) promoter-TSS (NM_138400) -301 NM_138400 64434 Hs.15825 NM_138400 ENSG00000146909 NOM1 C7orf3|PPP1R113|SGD1 nucleolar protein with MIF4G domain 1 protein-coding chr4-1029 chr4 94561286 94561530 + 18.1 0.000 intron (NM_001011516, intron 3 of 9) intron (NM_001011516, intron 3 of 9) 109466 NM_001256427 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr10-893 chr10 96857699 96857943 + 18.1 0.000 intron (NM_001170766, intron 2 of 8) intron (NM_001170766, intron 2 of 8) 24876 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr3-505 chr3 185658606 185658850 + 18.1 0.000 intron (NR_138486, intron 9 of 15) intron (NR_138486, intron 9 of 15) -54524 NR_126326 646600 Hs.647949 NR_027317 ENSG00000163915 IGF2BP2-AS1 C3orf65 IGF2BP2 antisense RNA 1 ncRNA chr12-794 chr12 1533338 1533582 + 18.1 0.000 Intergenic Intergenic -1268 NR_160736 107984507 NR_160736 LOC107984507 - uncharacterized LOC107984507 ncRNA chr1-2470 chr1 107140257 107140501 + 18.1 0.000 promoter-TSS (NM_001330665) promoter-TSS (NM_001330665) 291 NM_001312688 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr14-379 chr14 99381442 99381686 + 18.1 0.000 Intergenic LTR86C|LTR|ERVL 99295 NM_199123 84193 Hs.510407 NM_032233 ENSG00000183576 SETD3 C14orf154|hSETD3 SET domain containing 3, actin histidine methyltransferase protein-coding chr1-2160 chr1 1280631 1280875 + 18.1 0.000 intron (NM_001130413, intron 1 of 17) MER4B|LTR|ERV1 317 NM_001130413 6339 Hs.512681 NM_002978 ENSG00000162572 SCNN1D ENaCd|ENaCdelta|SCNED|dNaCh sodium channel epithelial 1 delta subunit protein-coding chr2-383 chr2 8087304 8087548 + 18.1 0.000 intron (NR_034135, intron 7 of 8) intron (NR_034135, intron 7 of 8) -110612 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA chr5-1051 chr5 67648184 67648428 + 18.1 0.000 Intergenic Intergenic -1517 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA chr11-908 chr11 64893472 64893716 + 18.1 0.000 promoter-TSS (NR_133639) promoter-TSS (NR_133639) -145 NR_133638 105369343 Hs.199371 NR_133638 MIR194-2HG - MIR194-2 host gene ncRNA chr7-880 chr7 1106911 1107155 + 18.1 0.000 intron (NM_001134395, intron 2 of 4) intron (NM_001134395, intron 2 of 4) 18920 NM_001098201 2852 Hs.20961 NM_001505 ENSG00000164850 GPER1 CEPR|CMKRL2|DRY12|FEG-1|GPCR-Br|GPER|GPR30|LERGU|LERGU2|LyGPR|mER G protein-coupled estrogen receptor 1 protein-coding chr14-197 chr14 73714143 73714387 + 18.1 0.000 TTS (NM_194278) TTS (NM_194278) 119 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding chr9-1207 chr9 41643663 41643907 + 18.1 0.000 Intergenic SST1|Satellite|centr -3889 NR_103714 100289124 Hs.567050 NM_001024608 FAM27E2 FAM27E1 family with sequence similarity 27 member E2 ncRNA chr10-1153 chr10 49112340 49112584 + 18.1 0.000 intron (NM_001031746, intron 1 of 7) MIRb|SINE|MIR 3060 NM_144984 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding chr17-952 chr17 28807970 28808214 + 18.1 0.000 intron (NM_001288635, intron 1 of 3) intron (NM_001288635, intron 1 of 3) 4379 NM_001288634 55731 Hs.564533 NM_018182 ENSG00000173065 FAM222B C17orf63 family with sequence similarity 222 member B protein-coding chr12-714 chr12 132046571 132046815 + 18.1 0.000 intron (NM_015409, intron 39 of 52) intron (NM_015409, intron 39 of 52) 15469 NR_002979 677829 Hs.742405 NR_002979 ENSG00000208892 SNORA49 ACA49 small nucleolar RNA, H/ACA box 49 snoRNA chr2-1954 chr2 227149845 227150089 + 18.1 0.000 intron (NM_000092, intron 1 of 47) intron (NM_000092, intron 1 of 47) 14592 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding chr2-1561 chr2 220033489 220033733 + 18.1 0.000 Intergenic Intergenic -127046 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr1-1859 chr1 165140040 165140284 + 18.1 0.000 Intergenic L2c|LINE|L2 216079 NM_001174069 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr6-473 chr6 160455763 160456007 + 18.1 0.000 Intergenic Intergenic 55239 NR_028093 80350 Hs.654503 NM_024492 ENSG00000213071 LPAL2 APOA2|APOAL|APOARGC|apo(a)rg-C lipoprotein(a) like 2, pseudogene pseudo chr14-214 chr14 64505289 64505533 + 18.1 0.000 promoter-TSS (NM_001304508) promoter-TSS (NM_001304508) -198 NM_001304507 7597 Hs.654571 NM_006977 ENSG00000089775 ZBTB25 C14orf51|KUP|ZNF46 zinc finger and BTB domain containing 25 protein-coding chr1-351 chr1 32612160 32612404 + 18.1 0.000 Intergenic Intergenic 38268 NM_001366278 339487 Hs.655921 NM_178547 ENSG00000176261 ZBTB8OS ARCH|ARCH2 zinc finger and BTB domain containing 8 opposite strand protein-coding chr8-616 chr8 28229838 28230082 + 18.1 0.000 Intergenic L1MEc|LINE|L1 -87308 NM_006228 5368 Hs.88218 NM_006228 ENSG00000168081 PNOC N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ prepronociceptin protein-coding chr6-303 chr6 28080557 28080801 + 18.1 0.000 5' UTR (NM_003447, exon 1 of 4) 5' UTR (NM_003447, exon 1 of 4) 111 NM_003447 7718 Hs.55481 NM_003447 ENSG00000197279 ZNF165 CT53|LD65|ZSCAN7 zinc finger protein 165 protein-coding chr9-1213 chr9 68693295 68693539 + 18.1 0.000 Intergenic Intergenic -11823 NM_003558 8395 Hs.534371 NM_003558 ENSG00000107242 PIP5K1B MSS4|STM7 phosphatidylinositol-4-phosphate 5-kinase type 1 beta protein-coding chr8-286 chr8 23382495 23382739 + 18.1 0.000 intron (NM_002318, intron 1 of 13) intron (NM_002318, intron 1 of 13) 21503 NM_002318 4017 Hs.626637 NM_002318 ENSG00000134013 LOXL2 LOR|LOR2|WS9-14 lysyl oxidase like 2 protein-coding chr19-1518 chr19 12289329 12289573 + 18.1 0.000 intron (NM_001353552, intron 1 of 3) MER92B|LTR|ERV1 5161 NM_001353551 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding chr11-804 chr11 66856492 66856736 + 18.1 0.000 promoter-TSS (NM_001363524) promoter-TSS (NM_001363524) -450 NM_024036 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr21-235 chr21 36155498 36155742 + 18.1 0.000 intron (NR_038892, intron 1 of 3) intron (NR_038892, intron 1 of 3) 688 NR_038892 100506428 Hs.651214 NR_038892 ENSG00000236830 CBR3-AS1 PlncRNA-1|PlncRNA1 CBR3 antisense RNA 1 ncRNA chr3-275 chr3 56801777 56802021 + 18.1 0.000 promoter-TSS (NM_019555) promoter-TSS (NM_019555) 50 NM_019555 50650 Hs.476402 NM_019555 ENSG00000163947 ARHGEF3 GEF3|STA3|XPLN Rho guanine nucleotide exchange factor 3 protein-coding chr11-1680 chr11 131630150 131630394 + 18.1 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 33284 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr3-604 chr3 115100384 115100628 + 18.1 0.000 promoter-TSS (NR_046877) promoter-TSS (NR_046877) 83 NR_046877 100874131 NR_046877 ENSG00000242767 ZBTB20-AS4 - ZBTB20 antisense RNA 4 ncRNA chr7-280 chr7 156640655 156640899 + 18.1 0.000 promoter-TSS (NR_026865) promoter-TSS (NR_026865) 3 NM_001308273 140545 Hs.446194 NM_030936 ENSG00000105982 RNF32 FKSG33|HSD15|LMBR2 ring finger protein 32 protein-coding chr5-773 chr5 111748277 111748521 + 18.1 0.000 intron (NM_001142474, intron 2 of 3) intron (NM_001142474, intron 2 of 3) 7852 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding chr12-388 chr12 3168748 3168992 + 18.1 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 91491 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr3-1472 chr3 177781755 177781999 + 18.1 0.000 Intergenic Intergenic -34988 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA chr2-215 chr2 167292902 167293146 + 18.1 0.000 Intergenic CpG 105652 NM_001199144 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding chr9-922 chr9 98193020 98193264 + 18.1 0.000 promoter-TSS (NM_052820) promoter-TSS (NM_052820) -505 NM_052820 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding chr16-1217 chr16 87639331 87639575 + 18.1 0.000 intron (NM_020655, intron 1 of 4) L1MB3|LINE|L1 36945 NM_001271604 57338 Hs.592068 NM_020655 ENSG00000154118 JPH3 CAGL237|HDL2|JP-3|JP3|TNRC22 junctophilin 3 protein-coding chr2-1370 chr2 215654158 215654402 + 18.1 0.000 intron (NR_037195, intron 5 of 9) AmnSINE2|SINE|tRNA-Deu -63763 NR_132383 105373869 Hs.152812 NR_132383 LINC01614 LCAL4 long intergenic non-protein coding RNA 1614 ncRNA chr11-1638 chr11 111745470 111745714 + 18.1 0.000 intron (NM_181699, intron 11 of 15) LTR101_Mam|LTR|ERVL 20797 NM_181700 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr12-1226 chr12 112184747 112184991 + 18.1 0.000 exon (NM_001109662, exon 61 of 76) exon (NM_001109662, exon 61 of 76) -21548 NR_106921 102465519 NR_106921 ENSG00000283793 MIR6861 hsa-mir-6861 microRNA 6861 ncRNA chr1-2316 chr1 29287150 29287394 + 18.1 0.000 intron (NM_133177, intron 14 of 30) intron (NM_133177, intron 14 of 30) 50750 NM_001195001 10076 Hs.19718 NM_005704 ENSG00000060656 PTPRU FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J protein tyrosine phosphatase receptor type U protein-coding chr20-332 chr20 37324047 37324291 + 18.1 0.000 Intergenic L1ME2z|LINE|L1 -20516 NM_005417 6714 Hs.195659 NM_005417 ENSG00000197122 SRC ASV|SRC1|THC6|c-SRC|p60-Src SRC proto-oncogene, non-receptor tyrosine kinase protein-coding chr2-948 chr2 62687694 62687938 + 18.1 0.000 intron (NM_001142615, intron 1 of 22) intron (NM_001142615, intron 1 of 22) 13938 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr12-1200 chr12 105257015 105257259 + 18.1 0.000 Intergenic Intergenic -20907 NM_001251904 55198 Hs.506603 NM_018171 ENSG00000136044 APPL2 DIP13B adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 protein-coding chr10-391 chr10 21315860 21316104 + 18.1 0.000 Intergenic Intergenic 56968 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA chr8-89 chr8 80240635 80240879 + 18.1 0.000 promoter-TSS (NR_049894) promoter-TSS (NR_049894) -632 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr11-911 chr11 65558948 65559192 + 18.1 0.000 promoter-TSS (NM_021070) promoter-TSS (NM_021070) -842 NM_001164266 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr2-833 chr2 38396165 38396409 + 18.1 0.000 Intergenic X6B_LINE|LINE|CR1 -17703 NM_001330462 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr2-866 chr2 174990256 174990500 + 18.1 0.000 intron (NR_038133, intron 1 of 11) intron (NR_038133, intron 1 of 11) 14875 NM_001822 1123 Hs.380138 NM_001822 ENSG00000128656 CHN1 ARHGAP2|CHN|DURS2|NC|RHOGAP2 chimerin 1 protein-coding chr3-939 chr3 33231676 33231920 + 18.1 0.000 Intergenic Intergenic -12988 NM_015551 26032 Hs.196647 NM_015551 ENSG00000173705 SUSD5 - sushi domain containing 5 protein-coding chr5-428 chr5 139666625 139666869 + 18.1 0.000 intron (NM_001317203, intron 2 of 3) intron (NM_001317203, intron 2 of 3) 7192 NM_001317207 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr1-1841 chr1 153985536 153985780 + 18.1 0.000 promoter-TSS (NM_001272038) promoter-TSS (NM_001272038) -292 NM_001272038 5872 Hs.151536 NM_002870 ENSG00000143545 RAB13 GIG4 RAB13, member RAS oncogene family protein-coding chr3-1347 chr3 82813576 82813820 + 18.1 0.000 Intergenic Tigger3|DNA|TcMar-Tigger 827556 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA chr11-1325 chr11 67391050 67391294 + 18.1 0.000 promoter-TSS (NM_004584) promoter-TSS (NM_004584) -814 NM_004584 5883 Hs.655354 NM_004584 ENSG00000172613 RAD9A RAD9 RAD9 checkpoint clamp component A protein-coding chr5-417 chr5 90474355 90474599 + 18.1 0.000 promoter-TSS (NM_006467) promoter-TSS (NM_006467) 294 NM_203406 153364 Hs.64004 NM_203406 ENSG00000176055 MBLAC2 - metallo-beta-lactamase domain containing 2 protein-coding chr1-2582 chr1 184491600 184491844 + 18.1 0.000 intron (NM_030806, intron 2 of 5) intron (NM_030806, intron 2 of 5) 104693 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr3-972 chr3 53880475 53880719 + 18.1 0.000 intron (NM_022899, intron 1 of 12) intron (NM_022899, intron 1 of 12) 1555 NM_022899 93973 Hs.412186 NM_022899 ENSG00000113812 ACTR8 ARP8|INO80N|hArp8 actin related protein 8 protein-coding chr13-430 chr13 25489285 25489529 + 18.1 0.000 intron (NM_016529, intron 2 of 36) intron (NM_016529, intron 2 of 36) 20633 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr4-1101 chr4 168634505 168634749 + 18.1 0.000 intron (NM_001166109, intron 1 of 18) intron (NM_001166109, intron 1 of 18) 3049 NM_001166109 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding chr14-470 chr14 53355761 53356005 + 18.1 0.000 Intergenic Intergenic 202529 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA chr2-1846 chr2 151043542 151043786 + 18.1 0.000 Intergenic MSTB2|LTR|ERVL-MaLR 218199 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-1657 chr2 31489531 31489775 + 18.1 0.000 Intergenic L1PA6|LINE|L1 -74911 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding chr20-419 chr20 34452224 34452468 + 18.1 0.000 intron (NM_001257137, intron 13 of 25) intron (NM_001257137, intron 13 of 25) -13979 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA chr7-1236 chr7 23273118 23273362 + 18.1 0.000 intron (NM_001005340, intron 9 of 10) intron (NM_001005340, intron 9 of 10) -26099 NM_138446 115416 Hs.87385 NM_138446 ENSG00000156928 MALSU1 C7orf30|mtRsfA mitochondrial assembly of ribosomal large subunit 1 protein-coding chr17-1182 chr17 79789831 79790075 + 18.1 0.000 Intergenic CpG 7124 NM_020649 57332 Hs.387258 NM_020649 ENSG00000141570 CBX8 PC3|RC1 chromobox 8 protein-coding chr2-852 chr2 97046063 97046307 + 18.1 0.000 Intergenic Intergenic 48697 NM_001320849 151313 Hs.567723 NM_199336 ENSG00000144199 FAHD2B - fumarylacetoacetate hydrolase domain containing 2B protein-coding chr20-523 chr20 3768504 3768748 + 18.1 0.000 promoter-TSS (NM_001039140) promoter-TSS (NM_001039140) -238 NR_047675 54976 Hs.274422 NM_017874 ENSG00000101220 C20orf27 - chromosome 20 open reading frame 27 protein-coding chr19-1483 chr19 5926639 5926883 + 18.1 0.000 intron (NM_003624, intron 9 of 16) intron (NM_003624, intron 9 of 16) 12507 NM_004058 828 Hs.584744 NM_004058 ENSG00000105519 CAPS CAPS1 calcyphosine protein-coding chr6-638 chr6 166589155 166589399 + 18.1 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) 37974 NM_021135 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr13-397 chr13 75760244 75760488 + 18.1 0.000 promoter-TSS (NM_001366634) promoter-TSS (NM_001366634) 46 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr12-1142 chr12 57740903 57741147 + 18.1 0.000 intron (NM_014770, intron 1 of 17) intron (NM_014770, intron 1 of 17) 1136 NM_014770 116986 Hs.302435 NM_014770 ENSG00000135439 AGAP2 CENTG1|GGAP2|PIKE ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 protein-coding chr1-2442 chr1 92502120 92502364 + 18.1 0.000 Intergenic L1MB7|LINE|L1 -15317 NM_005263 2672 Hs.73172 NM_005263 ENSG00000162676 GFI1 GFI-1|GFI1A|SCN2|ZNF163 growth factor independent 1 transcriptional repressor protein-coding chr2-1545 chr2 201798523 201798767 + 18.1 0.000 Intergenic Intergenic -7784 NM_139158 65061 Hs.348711 NM_139158 ENSG00000138395 CDK15 ALS2CR7|PFTAIRE2|PFTK2 cyclin dependent kinase 15 protein-coding chr5-956 chr5 177094762 177095006 + 18.1 0.000 intron (NM_022963, intron 9 of 15) intron (NM_022963, intron 9 of 15) 5334 NM_022963 2264 Hs.165950 NM_002011 ENSG00000160867 FGFR4 CD334|JTK2|TKF fibroblast growth factor receptor 4 protein-coding chr3-1301 chr3 52521053 52521297 + 18.1 0.000 intron (NM_015136, intron 55 of 68) intron (NM_015136, intron 55 of 68) 12682 NM_001134231 64943 Hs.84753 NM_022908 ENSG00000168268 NT5DC2 - 5'-nucleotidase domain containing 2 protein-coding chr2-1886 chr2 188291667 188291911 + 18.1 0.000 promoter-TSS (NM_016315) promoter-TSS (NM_016315) -85 NM_016315 51454 Hs.470887 NM_016315 ENSG00000144366 GULP1 CED-6|CED6|GULP GULP PTB domain containing engulfment adaptor 1 protein-coding chr3-686 chr3 183825337 183825581 + 18.1 0.000 exon (NM_024871, exon 1 of 3) exon (NM_024871, exon 1 of 3) 118 NM_024871 79929 Hs.478465 NM_024871 ENSG00000180834 MAP6D1 MAPO6D1|SL21 MAP6 domain containing 1 protein-coding chr9-1084 chr9 91839986 91840230 + 18.1 0.000 intron (NM_001318204, intron 1 of 7) intron (NM_001318204, intron 1 of 7) 110120 NM_001318204 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr1-2465 chr1 101846854 101847098 + 18.1 0.000 non-coding (NR_110212, exon 1 of 7) non-coding (NR_110212, exon 1 of 7) 104 NR_110212 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding chr9-1095 chr9 105646854 105647098 + 18.1 0.000 Intergenic Intergenic -15481 NM_005421 6887 Hs.247978 NM_005421 ENSG00000186051 TAL2 - TAL bHLH transcription factor 2 protein-coding chr3-915 chr3 5122206 5122450 + 18.1 0.000 promoter-TSS (NM_018184) promoter-TSS (NM_018184) 36 NM_018184 55207 Hs.250009 NM_018184 ENSG00000134108 ARL8B ARL10C|Gie1 ADP ribosylation factor like GTPase 8B protein-coding chr2-1738 chr2 74845619 74845863 + 18.1 0.000 intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 13086 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr7-910 chr7 6472682 6472926 + 18.1 0.000 intron (NM_001100603, intron 2 of 3) L2a|LINE|L2 11348 NM_001100603 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding chr7-637 chr7 75020012 75020256 + 18.1 0.000 exon (NM_001145064, exon 6 of 9) exon (NM_001145064, exon 6 of 9) 53668 NM_030798 81554 Hs.529623 NM_030798 ENSG00000274523 RCC1L WBSCR16 RCC1 like protein-coding chr15-342 chr15 87816713 87816957 + 18.1 0.000 Intergenic Intergenic 129433 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA chr1-1789 chr1 89125797 89126041 + 18.1 0.000 5' UTR (NM_004120, exon 1 of 11) 5' UTR (NM_004120, exon 1 of 11) 195 NM_004120 2634 Hs.386567 NM_004120 ENSG00000162645 GBP2 - guanylate binding protein 2 protein-coding chr2-1651 chr2 28400731 28400975 + 18.1 0.000 intron (NM_005253, intron 1 of 3) intron (NM_005253, intron 1 of 3) -6181 NR_103831 403150 Hs.562970 NR_103831 ENSG00000229951 FLJ31356 - uncharacterized protein FLJ31356 ncRNA chr17-1049 chr17 77480773 77481017 + 18.1 0.000 intron (NM_001113495, intron 1 of 9) intron (NM_001113495, intron 1 of 9) 5652 NM_001113495 10801 Hs.440932 NM_006640 ENSG00000184640 SEPTIN9 AF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1 septin 9 protein-coding chr1-2531 chr1 156926064 156926308 + 18.1 0.000 intron (NM_144702, intron 5 of 14) MLT1F2|LTR|ERVL-MaLR 5554 NM_144702 149499 Hs.491734 NM_144702 ENSG00000160838 LRRC71 C1orf92 leucine rich repeat containing 71 protein-coding chr1-2297 chr1 24949264 24949508 + 18.1 0.000 intron (NM_001320672, intron 2 of 6) intron (NM_001320672, intron 2 of 6) 15624 NM_001320672 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr11-1464 chr11 44167075 44167319 + 18.1 0.000 intron (NM_001178083, intron 8 of 14) L1MEg|LINE|L1 71000 NM_000401 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr2-1994 chr2 240688184 240688428 + 18.1 0.000 intron (NR_149021, intron 1 of 2) intron (NR_149021, intron 1 of 2) 1972 NR_149021 285191 Hs.729906 NR_149021 LOC285191 - uncharacterized LOC285191 ncRNA chr8-783 chr8 128999125 128999369 + 18.1 0.000 Intergenic MER44D|DNA|TcMar-Tigger -33246 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA chr6-1102 chr6 154341884 154342128 + 18.1 0.000 intron (NM_015553, intron 1 of 11) LTR34|LTR|ERV1 -11925 NM_001130699 26034 Hs.146100 NM_015553 ENSG00000074706 IPCEF1 PIP3-E interaction protein for cytohesin exchange factors 1 protein-coding chr7-417 chr7 39566224 39566468 + 18.1 0.000 promoter-TSS (NM_020192) promoter-TSS (NM_020192) -58 NM_020192 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding chr12-275 chr12 55720897 55721141 + 18.1 0.000 intron (NM_002905, intron 1 of 4) intron (NM_002905, intron 1 of 4) 626 NM_002905 5959 Hs.600940 NM_002905 ENSG00000135437 RDH5 9cRDH|HSD17B9|RDH1|SDR9C5 retinol dehydrogenase 5 protein-coding chr12-946 chr12 32534204 32534448 + 18.1 0.000 promoter-TSS (NM_001304480) promoter-TSS (NM_001304480) 33 NM_001304480 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr4-431 chr4 127856735 127856979 + 18.1 0.000 Intergenic MER76|LTR|ERVL -24036 NM_014264 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr16-1111 chr16 49881139 49881383 + 18.1 0.000 Intergenic Intergenic -23342 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr11-1524 chr11 64504138 64504382 + 18.1 0.000 Intergenic MLT2B1|LTR|ERVL -51681 NM_001307985 55867 Hs.220844 NM_018484 ENSG00000168065 SLC22A11 OAT4|hOAT4 solute carrier family 22 member 11 protein-coding chr12-779 chr12 122988369 122988613 + 18.1 0.000 intron (NM_020845, intron 18 of 24) intron (NM_020845, intron 18 of 24) 8431 NM_001002252 51329 Hs.103561 NM_016638 ENSG00000182196 ARL6IP4 SFRS20|SR-25|SRp25|SRrp37 ADP ribosylation factor like GTPase 6 interacting protein 4 protein-coding chr6-561 chr6 149545878 149546122 + 18.1 0.000 promoter-TSS (NM_139126) promoter-TSS (NM_139126) 43 NM_139126 85313 Hs.744238 NM_139126 ENSG00000131013 PPIL4 HDCME13P peptidylprolyl isomerase like 4 protein-coding chr19-1373 chr19 41910544 41910788 + 18.1 0.000 intron (NM_001365103, intron 2 of 5) intron (NM_001365103, intron 2 of 5) 18055 NM_001365103 390937 Hs.590950 NM_001365103 ENSG00000268041 LOC390937 - ETS domain-containing transcription factor ERF protein-coding chr1-1012 chr1 25616300 25616544 + 18.1 0.000 Intergenic CpG -1046 NM_001289010 57134 Hs.197043 NM_020379 ENSG00000117643 MAN1C1 HMIC|MAN1A3|MAN1C|pp6318 mannosidase alpha class 1C member 1 protein-coding chr13-335 chr13 50914435 50914679 + 18.1 0.000 intron (NM_001142279, intron 1 of 9) intron (NM_001142279, intron 1 of 9) -3845 NR_046552 100874255 Hs.741501 NR_046552 RNASEH2B-AS1 - RNASEH2B antisense RNA 1 ncRNA chr5-1021 chr5 44050810 44051054 + 18.1 0.000 Intergenic L2c|LINE|L2 -337800 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA chr14-615 chr14 41987475 41987719 + 18.1 0.000 Intergenic Intergenic 380741 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr4-195 chr4 1797415 1797659 + 18.1 0.000 intron (NR_148971, intron 2 of 18) intron (NR_148971, intron 2 of 18) 4225 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr16-516 chr16 28985165 28985409 + 18.1 0.000 TTS (NM_001142448) TTS (NM_001142448) 235 NM_014387 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr2-1136 chr2 174395415 174395659 + 18.1 0.000 promoter-TSS (NM_001193528) promoter-TSS (NM_001193528) 175 NM_004882 9541 Hs.632531 NM_004882 ENSG00000138433 CIR1 CIR corepressor interacting with RBPJ, 1 protein-coding chr4-827 chr4 87150801 87151045 + 18.1 0.000 Intergenic Intergenic 69345 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chr7-352 chr7 106284390 106284634 + 18.1 0.000 intron (NM_005746, intron 1 of 10) CpG 471 NM_005746 10135 Hs.489615 NM_005746 ENSG00000105835 NAMPT 1110035O14Rik|PBEF|PBEF1|VF|VISFATIN nicotinamide phosphoribosyltransferase protein-coding chr9-782 chr9 75724276 75724520 + 18.1 0.000 Intergenic Intergenic -166246 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding chr1-2610 chr1 202643949 202644193 + 18.1 0.000 promoter-TSS (NM_001136504) promoter-TSS (NM_001136504) -618 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr1-1611 chr1 1141881 1142125 + 18.1 0.000 intron (NR_038869, intron 2 of 2) intron (NR_038869, intron 2 of 2) 4986 NR_038869 254099 Hs.680488 NR_038869 ENSG00000223823 LINC01342 - long intergenic non-protein coding RNA 1342 ncRNA chr2-983 chr2 121634487 121634731 + 18.1 0.000 intron (NM_015282, intron 1 of 38) intron (NM_015282, intron 1 of 38) 14853 NM_001142273 23332 Hs.469840 NM_015282 ENSG00000074054 CLASP1 MAST1 cytoplasmic linker associated protein 1 protein-coding chr6-1029 chr6 87706715 87706959 + 18.1 0.000 Intergenic Intergenic -4604 NM_018064 55122 Hs.485915 NM_018064 ENSG00000135334 AKIRIN2 C6orf166|FBI1|dJ486L4.2 akirin 2 protein-coding chr2-1928 chr2 217908661 217908905 + 18.1 0.000 intron (NM_001308023, intron 1 of 29) intron (NM_001308023, intron 1 of 29) -8155 NR_106867 102465485 NR_106867 ENSG00000275458 MIR6809 hsa-mir-6809 microRNA 6809 ncRNA chr18-173 chr18 12934568 12934812 + 18.1 0.000 Intergenic Intergenic -13294 NM_031216 81929 Hs.301048 NM_031216 ENSG00000085415 SEH1L SEC13L|SEH1A|SEH1B|Seh1 SEH1 like nucleoporin protein-coding chr5-935 chr5 142697326 142697570 + 18.1 0.000 intron (NM_001354954, intron 1 of 4) intron (NM_001354954, intron 1 of 4) 573 NM_001257206 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr14-282 chr14 104725156 104725400 + 18.1 0.000 intron (NM_152328, intron 1 of 12) intron (NM_152328, intron 1 of 12) 1081 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr13-501 chr13 90302183 90302427 + 18.1 0.000 Intergenic Intergenic 71123 NR_030754 693207 NR_030754 ENSG00000283783 MIR622 MIRN622|hsa-mir-622 microRNA 622 ncRNA chr2-1517 chr2 146489832 146490076 + 18.1 0.000 Intergenic L1ME2|LINE|L1 -97103 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr7-488 chr7 134459008 134459252 + 18.1 0.000 promoter-TSS (NM_001628) promoter-TSS (NM_001628) -30 NM_001628 231 Hs.521212 NM_001628 ENSG00000085662 AKR1B1 ADR|ALDR1|ALR2|AR aldo-keto reductase family 1 member B protein-coding chr11-1617 chr11 93433471 93433715 + 18.1 0.000 intron (NM_181645, intron 13 of 13) L2|LINE|L2 102876 NM_181645 159989 Hs.436625 NM_181645 ENSG00000165325 DEUP1 CCDC67 deuterosome assembly protein 1 protein-coding chr17-571 chr17 81179812 81180056 + 18.1 0.000 intron (NM_001354639, intron 3 of 6) intron (NM_001354639, intron 3 of 6) -13713 NM_001080395 9625 Hs.514575 NM_004920 ENSG00000181409 AATK AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP apoptosis associated tyrosine kinase protein-coding chr17-1428 chr17 78681052 78681296 + 18.1 0.000 intron (NM_001365041, intron 10 of 12) intron (NM_001365041, intron 10 of 12) 35858 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr7-913 chr7 12043533 12043777 + 18.1 0.000 Intergenic MLT2A2|LTR|ERVL -167639 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding chr2-1103 chr2 88469303 88469547 + 18.1 0.000 Intergenic (ACTCT)n|Simple_repeat|Simple_repeat -16732 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr7-600 chr7 131009296 131009540 + 18.1 0.000 intron (NR_109850, intron 3 of 5) intron (NR_109850, intron 3 of 5) 95954 NR_109780 100506860 Hs.635013 NR_109780 LINC00513 - long intergenic non-protein coding RNA 513 ncRNA chr2-1405 chr2 237025130 237025374 + 18.1 0.000 Intergenic L2a|LINE|L2 30915 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA chr17-674 chr17 4998620 4998864 + 18.1 0.000 intron (NM_006612, intron 1 of 22) intron (NM_006612, intron 1 of 22) 792 NM_006612 10749 Hs.435120 NM_006612 ENSG00000129250 KIF1C LTXS1|SATX2|SAX2|SPAX2|SPG58 kinesin family member 1C protein-coding chr1-1492 chr1 20507977 20508221 + 18.1 0.000 promoter-TSS (NM_024544) promoter-TSS (NM_024544) 52 NM_024544 79594 Hs.10101 NM_024544 ENSG00000090432 MUL1 C1orf166|GIDE|MAPL|MULAN|RNF218 mitochondrial E3 ubiquitin protein ligase 1 protein-coding chr1-2614 chr1 203257241 203257485 + 18.1 0.000 Intergenic L1P2|LINE|L1 -27690 NM_003465 1118 Hs.201688 NM_003465 ENSG00000133063 CHIT1 CHI3|CHIT|CHITD chitinase 1 protein-coding chr4-845 chr4 140955544 140955788 + 18.1 0.000 intron (NM_020724, intron 2 of 6) intron (NM_020724, intron 2 of 6) 177803 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr9-891 chr9 70480774 70481018 + 18.1 0.000 Intergenic Intergenic -66239 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr10-837 chr10 58625144 58625388 + 18.1 0.000 intron (NM_001080512, intron 2 of 20) intron (NM_001080512, intron 2 of 20) -89749 NR_027508 728640 Hs.729209 NR_027508 FAM133CP - family with sequence similarity 133, member A pseudogene pseudo chr19-1175 chr19 5876801 5877045 + 18.1 0.000 Intergenic Intergenic -6383 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding chr14-731 chr14 67409868 67410112 + 18.1 0.000 intron (NM_016445, intron 1 of 8) intron (NM_016445, intron 1 of 8) 2175 NM_016445 26499 Hs.170473 NM_016445 ENSG00000100558 PLEK2 - pleckstrin 2 protein-coding chr10-680 chr10 103895527 103895771 + 18.1 0.000 intron (NM_024928, intron 7 of 9) intron (NM_024928, intron 7 of 9) 22535 NM_024928 79991 Hs.62314 NM_024928 ENSG00000107960 STN1 AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2 STN1 subunit of CST complex protein-coding chr14-688 chr14 33027002 33027246 + 18.1 0.000 intron (NM_001165893, intron 1 of 10) intron (NM_001165893, intron 1 of 10) 88245 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr1-855 chr1 93738422 93738666 + 18.1 0.000 intron (NM_001261408, intron 2 of 13) intron (NM_001261408, intron 2 of 13) 36839 NR_148965 723788 Hs.659312 NR_148965 ENSG00000137936 MIG7 - mig-7 ncRNA chr4-292 chr4 70902419 70902663 + 18.1 0.000 exon (NM_001244767, exon 1 of 4) exon (NM_001244767, exon 1 of 4) 172 NM_001244766 92597 Hs.691454 NM_173468 ENSG00000173542 MOB1B MATS2|MOB4A|MOBKL1A MOB kinase activator 1B protein-coding chr8-931 chr8 101603603 101603847 + 18.1 0.000 intron (NM_024915, intron 8 of 15) intron (NM_024915, intron 8 of 15) 111286 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding chr6-1072 chr6 133924072 133924316 + 18.0 0.000 Intergenic Intergenic -27976 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chrX-56 chrX 154546897 154547141 + 18.0 0.000 promoter-TSS (NM_001145255) promoter-TSS (NM_001145255) -1 NM_000402 2539 Hs.461047 NM_000402 ENSG00000160211 G6PD G6PD1 glucose-6-phosphate dehydrogenase protein-coding chr5-824 chr5 151718721 151718965 + 18.0 0.000 Intergenic Intergenic -31928 NM_001309443 6678 Hs.111779 NM_003118 ENSG00000113140 SPARC BM-40|OI17|ON secreted protein acidic and cysteine rich protein-coding chr2-1717 chr2 63698942 63699186 + 18.0 0.000 Intergenic Intergenic 109913 NM_001199111 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding chr14-729 chr14 65277099 65277343 + 18.0 0.000 Intergenic Charlie1a|DNA|hAT-Charlie -54874 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA chr3-1507 chr3 196227801 196228045 + 18.0 0.000 intron (NM_152672, intron 4 of 8) intron (NM_152672, intron 4 of 8) 11389 NM_152672 200931 Hs.630585 NM_152672 ENSG00000163959 SLC51A OSTA|OSTalpha solute carrier family 51 alpha subunit protein-coding chr8-872 chr8 52563568 52563812 + 18.0 0.000 intron (NM_207413, intron 1 of 4) intron (NM_207413, intron 1 of 4) 1740 NM_207413 389658 Hs.527111 NM_207413 ENSG00000196711 ALKAL1 AUGA|AUGB|FAM150A|UNQ9433 ALK and LTK ligand 1 protein-coding chr3-963 chr3 49906246 49906490 + 18.0 0.000 Intergenic Intergenic -2495 NR_134919 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr7-536 chr7 154645980 154646224 + 18.0 0.000 intron (NR_157196, intron 6 of 25) intron (NR_157196, intron 6 of 25) -282415 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr16-1090 chr16 29848386 29848630 + 18.0 0.000 TTS (NM_001293205) TTS (NM_001293205) 14718 NM_001286586 10423 Hs.121549 NM_006319 ENSG00000103502 CDIPT PIS|PIS1 CDP-diacylglycerol--inositol 3-phosphatidyltransferase protein-coding chr11-1531 chr11 65086363 65086607 + 18.0 0.000 exon (NM_006782, exon 4 of 8) exon (NM_006782, exon 4 of 8) 2263 NM_006782 7542 Hs.98170 NM_006782 ENSG00000162300 ZFPL1 D11S750|MCG4 zinc finger protein like 1 protein-coding chr10-1245 chr10 98038128 98038372 + 18.0 0.000 Intergenic L3b|LINE|CR1 -7422 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding chr3-1324 chr3 61162713 61162957 + 18.0 0.000 intron (NR_148922, intron 2 of 3) LTR37A|LTR|ERV1 88617 NM_001354590 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding chr10-673 chr10 100998391 100998635 + 18.0 0.000 intron (NM_001318099, intron 1 of 4) CpG-3258 234 NM_001318099 84445 Hs.523221 NM_032429 ENSG00000107816 LZTS2 LAPSER1 leucine zipper tumor suppressor 2 protein-coding chr19-752 chr19 40690717 40690961 + 18.0 0.000 promoter-TSS (NM_001289980) promoter-TSS (NM_001289980) -188 NM_004756 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr1-1293 chr1 21841765 21842009 + 18.0 0.000 intron (NM_005529, intron 69 of 96) intron (NM_005529, intron 69 of 96) 29622 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr3-1124 chr3 57944231 57944475 + 18.0 0.000 Intergenic Intergenic 54351 NM_001304423 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding chr19-1273 chr19 46863953 46864197 + 18.0 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 3078 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr22-388 chr22 31633879 31634123 + 18.0 0.000 intron (NM_001326416, intron 3 of 10) intron (NM_001326416, intron 3 of 10) -3177 NM_014338 23761 Hs.420559 NM_014338 ENSG00000241878 PISD DJ858B16|PSD|PSDC|PSSC|dJ858B16.2 phosphatidylserine decarboxylase protein-coding chr21-119 chr21 44316316 44316560 + 18.0 0.000 exon (NM_002626, exon 9 of 22) exon (NM_002626, exon 9 of 22) 16385 NM_001002021 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr9-1224 chr9 77752623 77752867 + 18.0 0.000 intron (NM_002072, intron 5 of 6) intron (NM_002072, intron 5 of 6) -104423 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr1-1264 chr1 9143335 9143579 + 18.0 0.000 Intergenic Intergenic 8320 NR_029610 407040 NR_029610 ENSG00000284357 MIR34A MIRN34A|miRNA34A|mir-34|mir-34a microRNA 34a ncRNA chr9-1164 chr9 4297532 4297776 + 18.0 0.000 intron (NM_001042413, intron 1 of 10) intron (NM_001042413, intron 1 of 10) 2414 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding chr12-842 chr12 56221157 56221401 + 18.0 0.000 intron (NM_194359, intron 1 of 6) intron (NM_194359, intron 1 of 6) 422 NM_001242826 10193 Hs.524502 NM_005785 ENSG00000181852 RNF41 FLRF|NRDP1|SBBI03 ring finger protein 41 protein-coding chr14-735 chr14 68210923 68211167 + 18.0 0.000 intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 387453 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding chr4-946 chr4 37146742 37146986 + 18.0 0.000 Intergenic THE1C-int|LTR|ERVL-MaLR 95127 NR_039965 100616435 NR_039965 ENSG00000264319 MIR4801 - microRNA 4801 ncRNA chr14-808 chr14 104382654 104382898 + 18.0 0.000 Intergenic Intergenic 159192 NR_146611 145195 Hs.534297 NR_146611 ENSG00000258913 LINC02691 C14orf144 long intergenic non-protein coding RNA 2691 ncRNA chr3-763 chr3 122794039 122794283 + 18.0 0.000 promoter-TSS (NM_024610) promoter-TSS (NM_024610) -330 NM_001320728 79663 Hs.29169 NM_024610 ENSG00000169087 HSPBAP1 PASS1 HSPB1 associated protein 1 protein-coding chr1-1497 chr1 28458858 28459102 + 18.0 0.000 intron (NM_001350161, intron 3 of 14) intron (NM_001350161, intron 3 of 14) 20830 NM_023923 65979 Hs.225641 NM_023923 ENSG00000204138 PHACTR4 PPP1R124 phosphatase and actin regulator 4 protein-coding chr19-513 chr19 30227418 30227662 + 18.0 0.000 Intergenic CpG -144844 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr3-1380 chr3 115280413 115280657 + 18.0 0.000 Intergenic Intergenic -133247 NM_001348803 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding chr4-694 chr4 53377636 53377880 + 18.0 0.000 5' UTR (NM_030917, exon 1 of 18) 5' UTR (NM_030917, exon 1 of 18) 105 NM_001134938 81608 Hs.555109 NM_030917 ENSG00000145216 FIP1L1 FIP1|Rhe|hFip1 factor interacting with PAPOLA and CPSF1 protein-coding chr8-350 chr8 94896408 94896652 + 18.0 0.000 intron (NM_001354534, intron 1 of 8) CpG-27438 731 NR_148906 137682 Hs.435500 NM_152416 ENSG00000156170 NDUFAF6 C8orf38|MC1DN17 NADH:ubiquinone oxidoreductase complex assembly factor 6 protein-coding chr4-720 chr4 94480398 94480642 + 18.0 0.000 intron (NM_001256428, intron 2 of 11) LTR33A|LTR|ERVL 28578 NM_001256427 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding chr7-858 chr7 134695241 134695485 + 18.0 0.000 Intergenic Intergenic 48510 NM_001724 669 Hs.198365 NM_001724 ENSG00000172331 BPGM DPGM|ECYT8 bisphosphoglycerate mutase protein-coding chr11-960 chr11 131579916 131580160 + 18.0 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) -39171 NR_110140 101929653 Hs.559159 NR_110140 ENSG00000237654 LOC101929653 - uncharacterized LOC101929653 ncRNA chr21-259 chr21 44435198 44435442 + 18.0 0.000 intron (NM_003307, intron 28 of 31) intron (NM_003307, intron 28 of 31) -9757 NR_109964 101928607 Hs.666176 NR_109964 TRPM2-AS TRPM2-AS1 TRPM2 antisense RNA ncRNA chr1-1844 chr1 155179609 155179853 + 18.0 0.000 exon (NM_001282378, exon 7 of 9) exon (NM_001282378, exon 7 of 9) 4977 NR_046329 80128 Hs.287735 NM_025058 ENSG00000163462 TRIM46 GENEY|TRIFIC tripartite motif containing 46 protein-coding chr2-1915 chr2 212318742 212318986 + 18.0 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 107496 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr6-441 chr6 3746110 3746354 + 18.0 0.000 intron (NM_183373, intron 1 of 4) intron (NM_183373, intron 1 of 4) 5780 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr10-663 chr10 94108207 94108451 + 18.0 0.000 intron (NR_120616, intron 1 of 7) intron (NR_120616, intron 1 of 7) 465 NR_120615 101927049 Hs.144492 NR_120615 ENSG00000232913 PLCE1-AS2 - PLCE1 antisense RNA 2 ncRNA chr8-294 chr8 29655478 29655722 + 18.0 0.000 Intergenic Intergenic 92509 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr8-827 chr8 25319869 25320113 + 18.0 0.000 intron (NM_024940, intron 15 of 51) intron (NM_024940, intron 15 of 51) -25411 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA chr6-563 chr6 150600487 150600731 + 18.0 0.000 intron (NM_001329799, intron 1 of 15) CpG 724 NM_001029884 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr2-1097 chr2 70123277 70123521 + 18.0 0.000 TTS (NR_024444) TTS (NR_024444) 1917 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr3-1249 chr3 39000165 39000409 + 18.0 0.000 intron (NM_001349253, intron 2 of 29) intron (NM_001349253, intron 2 of 29) -49726 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding chr5-190 chr5 90529548 90529792 + 18.0 0.000 promoter-TSS (NM_198273) promoter-TSS (NM_198273) -86 NM_001286812 116068 Hs.136235 NM_198273 ENSG00000176018 LYSMD3 - LysM domain containing 3 protein-coding chrX-334 chrX 133293417 133293661 + 18.0 0.000 Intergenic Intergenic -75185 NM_016521 51270 NM_016521 ENSG00000183434 TFDP3 CT30|DP4|HCA661 transcription factor Dp family member 3 protein-coding chr14-446 chr14 102209261 102209505 + 18.0 0.000 non-coding (NR_038354, exon 4 of 4) non-coding (NR_038354, exon 4 of 4) 26043 NM_001353832 5891 Hs.36859 NM_014226 ENSG00000080823 MOK RAGE|RAGE-1|RAGE1|STK30 MOK protein kinase protein-coding chr15-49 chr15 17082329 17082573 + 18.0 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3200293 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr18-219 chr18 10016166 10016410 + 18.0 0.000 Intergenic Intergenic 102272 NM_194434 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr15-545 chr15 40828419 40828663 + 18.0 0.000 exon (NM_001130143, exon 1 of 5) exon (NM_001130143, exon 1 of 5) 167 NM_001130143 54866 Hs.192927 NM_017726 ENSG00000166143 PPP1R14D CPI17-like|GBPI-1|GBPI1 protein phosphatase 1 regulatory inhibitor subunit 14D protein-coding chr15-344 chr15 101091664 101091908 + 18.0 0.000 Intergenic MIR3|SINE|MIR 160262 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding chr9-1050 chr9 137582683 137582927 + 18.0 0.000 intron (NM_138462, intron 5 of 5) intron (NM_138462, intron 5 of 5) -3880 NM_001346386 92715 Hs.292570 NM_138778 ENSG00000148399 DPH7 C9orf112|RRT2|WDR85 diphthamide biosynthesis 7 protein-coding chr4-523 chr4 54513220 54513464 + 18.0 0.000 Intergenic Intergenic 93789 NR_134657 339978 NR_134657 ENSG00000250456 LINC02260 - long intergenic non-protein coding RNA 2260 ncRNA chr5-1110 chr5 133485583 133485827 + 18.0 0.000 intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) -57999 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr6-470 chr6 148530550 148530794 + 18.0 0.000 intron (NM_001346506, intron 13 of 20) intron (NM_001346506, intron 13 of 20) 21521 NM_001346509 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr10-1176 chr10 70053573 70053817 + 18.0 0.000 intron (NM_018649, intron 1 of 8) CpG 849 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding chr6-687 chr6 46704545 46704789 + 18.0 0.000 TTS (NM_001168359) TTS (NM_001168359) -16502 NR_134643 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 - uncharacterized LOC101926934 ncRNA chr17-1477 chr17 82388473 82388717 + 18.0 0.000 TTS (NM_175902) TTS (NM_175902) 14318 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr15-483 chr15 60407552 60407796 + 18.0 0.000 Intergenic Intergenic -9688 NM_001136015 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr15-389 chr15 70794830 70795074 + 18.0 0.000 Intergenic Intergenic -31394 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr2-1893 chr2 195657980 195658224 + 18.0 0.000 intron (NM_020342, intron 1 of 9) CpG 876 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr2-851 chr2 96638144 96638388 + 18.0 0.000 promoter-TSS (NM_001349260) promoter-TSS (NM_001349260) 46 NR_146100 55683 Hs.516341 NM_017991 ENSG00000114982 KANSL3 KIAA1310|NSL3|Rcd1 KAT8 regulatory NSL complex subunit 3 protein-coding chr3-550 chr3 8744954 8745198 + 18.0 0.000 intron (NM_001234, intron 1 of 2) MSTA|LTR|ERVL-MaLR 11274 NM_001234 859 Hs.98303 NM_001234 ENSG00000182533 CAV3 LGMD1C|LQT9|MPDT|RMD2|VIP-21|VIP21 caveolin 3 protein-coding chr3-1206 chr3 5162198 5162442 + 18.0 0.000 intron (NM_018184, intron 1 of 6) intron (NM_018184, intron 1 of 6) -25387 NM_014674 9695 Hs.224616 NM_014674 ENSG00000134109 EDEM1 EDEM ER degradation enhancing alpha-mannosidase like protein 1 protein-coding chr3-941 chr3 39201713 39201957 + 18.0 0.000 Intergenic Intergenic -9240 NM_001198621 165904 Hs.447868 NM_194293 ENSG00000168334 XIRP1 CMYA1|Xin xin actin binding repeat containing 1 protein-coding chr2-1735 chr2 74501383 74501627 + 18.0 0.000 intron (NM_001009812, intron 1 of 1) intron (NM_001009812, intron 1 of 1) -1088 NR_024606 151534 Hs.745121 NM_138482 ENSG00000257702 LBX2-AS1 - LBX2 antisense RNA 1 ncRNA chr11-1634 chr11 110031261 110031505 + 18.0 0.000 Intergenic Intergenic -62009 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding chr5-779 chr5 118792022 118792266 + 18.0 0.000 Intergenic Intergenic -182442 NR_036262 100422885 NR_036262 ENSG00000283498 MIR1244-2 - microRNA 1244-2 ncRNA chr7-1228 chr7 18866744 18866988 + 18.0 0.000 intron (NM_058176, intron 20 of 22) intron (NM_058176, intron 20 of 22) 250770 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr16-611 chr16 577996 578240 + 18.0 0.000 intron (NM_148920, intron 4 of 9) intron (NM_148920, intron 4 of 9) 8150 NM_004204 9091 Hs.741878 NM_004204 ENSG00000007541 PIGQ GPI1|c407A10.1 phosphatidylinositol glycan anchor biosynthesis class Q protein-coding chr14-758 chr14 80954895 80955139 + 18.0 0.000 promoter-TSS (NM_001018036) promoter-TSS (NM_001018036) -604 NM_000369 7253 Hs.160411 NM_000369 ENSG00000165409 TSHR CHNG1|LGR3|hTSHR-I thyroid stimulating hormone receptor protein-coding chr17-633 chr17 50639059 50639303 + 18.0 0.000 intron (NM_003786, intron 1 of 30) intron (NM_003786, intron 1 of 30) 4300 NM_003786 8714 Hs.463421 NM_003786 ENSG00000108846 ABCC3 ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2 ATP binding cassette subfamily C member 3 protein-coding chr5-1164 chr5 159928536 159928780 + 18.0 0.000 intron (NM_000679, intron 1 of 1) intron (NM_000679, intron 1 of 1) 12176 NM_000679 147 Hs.368632 NM_000679 ENSG00000170214 ADRA1B ADRA1|ALPHA1BAR adrenoceptor alpha 1B protein-coding chr17-787 chr17 50186607 50186851 + 18.0 0.000 exon (NM_000088, exon 48 of 51) exon (NM_000088, exon 48 of 51) -14253 NR_024193 373861 Hs.25934 NM_194072 HILS1 H1.9 histone linker H1 domain, spermatid-specific 1 (pseudogene) pseudo chr4-766 chr4 168408829 168409073 + 18.0 0.000 intron (NM_001345927, intron 22 of 37) intron (NM_001345927, intron 22 of 37) 71541 NM_001345927 91351 Hs.535011 NM_001012967 ENSG00000181381 DDX60L - DExD/H-box 60 like protein-coding chrX-379 chrX 69094639 69094883 + 18.0 0.000 Intergenic Intergenic 70692 NM_022368 64219 Hs.522679 NM_022368 ENSG00000181191 PJA1 PRAJA1|RNF70 praja ring finger ubiquitin ligase 1 protein-coding chr15-394 chr15 73752430 73752674 + 18.0 0.000 promoter-TSS (NM_001303254) promoter-TSS (NM_001303254) -182 NM_001303254 388135 Hs.40794 NM_001039614 ENSG00000205363 INSYN1 C15orf59 inhibitory synaptic factor 1 protein-coding chr6-750 chr6 155228506 155228750 + 18.0 0.000 intron (NM_001010927, intron 1 of 12) intron (NM_001010927, intron 1 of 12) 11662 NM_001010927 26230 Hs.586279 NM_012454 ENSG00000146426 TIAM2 STEF|TIAM-2 T cell lymphoma invasion and metastasis 2 protein-coding chr10-1013 chr10 73774968 73775212 + 18.0 0.000 intron (NM_173540, intron 2 of 2) intron (NM_173540, intron 2 of 2) 2799 NM_001284194 170384 Hs.588854 NM_173540 ENSG00000196968 FUT11 FUCTXI fucosyltransferase 11 protein-coding chr11-645 chr11 131000395 131000639 + 18.0 0.000 Intergenic MER58A|DNA|hAT-Charlie -84030 NM_001347926 399979 Hs.444024 NM_014758 ENSG00000120451 SNX19 CHET8 sorting nexin 19 protein-coding chr1-712 chr1 77683363 77683607 + 18.0 0.000 promoter-TSS (NM_001308237) promoter-TSS (NM_001308237) -58 NM_001308237 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr10-1106 chr10 24723862 24724106 + 18.0 0.000 promoter-TSS (NM_020824) promoter-TSS (NM_020824) -97 NM_001367447 57584 Hs.524195 NM_020824 ENSG00000107863 ARHGAP21 ARHGAP10 Rho GTPase activating protein 21 protein-coding chr7-1443 chr7 151104984 151105228 + 18.0 0.000 intron (NM_001350103, intron 1 of 18) intron (NM_001350103, intron 1 of 18) -9532 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr2-1314 chr2 147636628 147636872 + 18.0 0.000 Intergenic Intergenic -207767 NM_001278579 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding chr19-1444 chr19 2325299 2325543 + 18.0 0.000 intron (NM_016199, intron 2 of 3) intron (NM_016199, intron 2 of 3) 3165 NM_016199 51690 Hs.512610 NM_016199 ENSG00000130332 LSM7 YNL147W LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr15-618 chr15 39139962 39140206 + 18.0 0.000 Intergenic Intergenic -110585 NR_144507 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA chr1-2318 chr1 29832487 29832731 + 18.0 0.000 Intergenic Intergenic 205003 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr15-450 chr15 36430760 36431004 + 18.0 0.000 Intergenic Intergenic -148744 NM_001321761 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr9-709 chr9 128886256 128886500 + 18.0 0.000 intron (NM_001127244, intron 2 of 3) intron (NM_001127244, intron 2 of 3) -3855 NM_001352989 883 Hs.495250 NM_004059 ENSG00000171097 KYAT1 CCBL1|GTK|KAT1|KATI kynurenine aminotransferase 1 protein-coding chr2-926 chr2 38376948 38377192 + 18.0 0.000 promoter-TSS (NM_001308076) promoter-TSS (NM_001308076) 203 NM_001135673 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding chr19-736 chr19 10701891 10702135 + 18.0 0.000 exon (NM_031209, exon 2 of 10) exon (NM_031209, exon 2 of 10) 574 NM_031209 81890 Hs.631638 NM_031209 ENSG00000213339 QTRT1 FP3235|TGT|TGUT queuine tRNA-ribosyltransferase catalytic subunit 1 protein-coding chr22-343 chr22 50444613 50444857 + 18.0 0.000 TTS (NM_002972) TTS (NM_002972) 30300 NM_001365819 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr4-810 chr4 33924417 33924661 + 18.0 0.000 intron (NR_125902, intron 4 of 4) MER61D|LTR|ERV1 115354 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA chr6-672 chr6 35725840 35726084 + 18.0 0.000 TTS (NR_027117) TTS (NR_027117) 2621 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr1-1887 chr1 184622469 184622713 + 18.0 0.000 3' UTR (NM_030806, exon 6 of 6) 3' UTR (NM_030806, exon 6 of 6) 132267 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding chr20-280 chr20 53773710 53773954 + 18.0 0.000 Intergenic MER58A|DNA|hAT-Charlie 101877 NR_002189 391257 Hs.449977 NR_002189 SUMO1P1 PIC1L|UBL2|UBL6 SUMO1 pseudogene 1 pseudo chr13-104 chr13 52455372 52455616 + 18.0 0.000 promoter-TSS (NM_001286686) promoter-TSS (NM_001286686) 16 NM_018204 26586 Hs.444028 NM_018204 ENSG00000136108 CKAP2 LB1|TMAP|se20-10 cytoskeleton associated protein 2 protein-coding chr12-1253 chr12 122637833 122638077 + 18.0 0.000 Intergenic Intergenic 58044 NR_162094 113218484 NR_162094 MIR9902-1 - microRNA 9902-1 ncRNA chr2-1064 chr2 9675417 9675661 + 18.0 0.000 Intergenic Tigger14a|DNA|TcMar-Tigger -44542 NM_006826 10971 Hs.74405 NM_006826 ENSG00000134308 YWHAQ 14-3-3|1C5|HS1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta protein-coding chr21-229 chr21 32392799 32393043 + 18.0 0.000 promoter-TSS (NR_026845) promoter-TSS (NR_026845) 91 NM_014825 9875 Hs.473611 NM_014825 ENSG00000142207 URB1 C21orf108|NPA1 URB1 ribosome biogenesis homolog protein-coding chr14-623 chr14 51807547 51807791 + 18.0 0.000 Intergenic Intergenic -52943 NM_001243773 54331 Hs.187772 NM_053064 ENSG00000186469 GNG2 - G protein subunit gamma 2 protein-coding chr14-745 chr14 72801409 72801653 + 18.0 0.000 intron (NM_001280542, intron 1 of 10) intron (NM_001280542, intron 1 of 10) 91118 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr14-515 chr14 38079237 38079481 + 18.0 0.000 Intergenic Intergenic -128545 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr8-832 chr8 27646539 27646783 + 18.0 0.000 intron (NM_182826, intron 1 of 5) intron (NM_182826, intron 1 of 5) 12601 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr2-1291 chr2 108168304 108168548 + 18.0 0.000 intron (NR_131251, intron 4 of 4) intron (NR_131251, intron 4 of 4) 49415 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA chr20-411 chr20 18739722 18739966 + 18.0 0.000 intron (NM_080820, intron 4 of 5) intron (NM_080820, intron 4 of 5) -41136 NR_109955 101929526 Hs.639402 NR_109955 ENSG00000233993 LOC101929526 - uncharacterized LOC101929526 ncRNA chr8-829 chr8 26046468 26046712 + 18.0 0.000 Intergenic CpG-27103 -1177 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding chr16-900 chr16 89570255 89570499 + 18.0 0.000 Intergenic Intergenic -5381 NM_014427 27132 Hs.461775 NM_014427 ENSG00000178773 CPNE7 - copine 7 protein-coding chr8-843 chr8 32450446 32450690 + 18.0 0.000 intron (NM_013962, intron 1 of 4) AluJb|SINE|Alu 9822 NR_047475 100874286 Hs.147060 NR_047475 ENSG00000254049 NRG1-IT3 - NRG1 intronic transcript 3 ncRNA chr21-183 chr21 43777998 43778242 + 18.0 0.000 Intergenic Intergenic -1745 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr8-868 chr8 48862933 48863177 + 18.0 0.000 Intergenic Intergenic 58374 NM_003068 6591 Hs.360174 NM_003068 ENSG00000019549 SNAI2 SLUG|SLUGH|SLUGH1|SNAIL2|WS2D snail family transcriptional repressor 2 protein-coding chr6-1034 chr6 99013258 99013502 + 18.0 0.000 Intergenic Intergenic -65374 NM_012160 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr15-509 chr15 74724000 74724244 + 18.0 0.000 intron (NM_001319217, intron 1 of 6) intron (NM_001319217, intron 1 of 6) 1406 NM_001319217 1543 Hs.72912 NM_000499 ENSG00000140465 CYP1A1 AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX cytochrome P450 family 1 subfamily A member 1 protein-coding chr13-203 chr13 27270822 27271066 + 18.0 0.000 promoter-TSS (NM_001331126) promoter-TSS (NM_001331126) -233 NM_001331126 387496 Hs.192131 NM_206827 ENSG00000122035 RASL11A - RAS like family 11 member A protein-coding chr1-1565 chr1 170316243 170316487 + 18.0 0.000 Intergenic Intergenic -32157 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr1-2158 chr1 1203697 1203941 + 17.8 0.000 exon (NM_148901, exon 4 of 4) exon (NM_148901, exon 4 of 4) 2773 NM_148902 8784 Hs.212680 NM_004195 ENSG00000186891 TNFRSF18 AITR|CD357|ENERGEN|GITR|GITR-D TNF receptor superfamily member 18 protein-coding chr14-730 chr14 66293705 66293949 + 17.8 0.000 Intergenic Intergenic -192544 NM_001351576 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding chr2-1991 chr2 239945187 239945431 + 17.8 0.000 intron (NR_136158, intron 7 of 10) MIRc|SINE|MIR -2215 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA chr10-1273 chr10 103968009 103968253 + 17.8 0.000 intron (NM_001304743, intron 1 of 17) intron (NM_001304743, intron 1 of 17) 991 NM_001304743 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding chr9-255 chr9 124348910 124349154 + 17.8 0.000 intron (NM_001166169, intron 9 of 9) intron (NM_001166169, intron 9 of 9) -4441 NR_027406 100129034 Hs.654980 NR_027406 LOC100129034 - uncharacterized LOC100129034 ncRNA chr15-617 chr15 38648230 38648474 + 17.8 0.000 Intergenic Intergenic -48246 NR_160786 chr20-401 chr20 9035165 9035409 + 17.8 0.000 Intergenic AluJr|SINE|Alu -33767 NM_001172646 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding chr11-1673 chr11 128467602 128467846 + 17.8 0.000 intron (NM_001330451, intron 5 of 6) intron (NM_001330451, intron 5 of 6) 54586 NM_005238 2113 Hs.369438 NM_005238 ENSG00000134954 ETS1 ETS-1|EWSR2|c-ets-1|p54 ETS proto-oncogene 1, transcription factor protein-coding chr1-920 chr1 27599221 27599465 + 17.8 0.000 intron (NM_001029882, intron 1 of 6) intron (NM_001029882, intron 1 of 6) 4151 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr16-837 chr16 66502581 66502825 + 17.8 0.000 Intergenic L2b|LINE|L2 -26301 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chrX-239 chrX 24782153 24782397 + 17.8 0.000 intron (NM_016937, intron 26 of 36) MamRep605|LTR?|LTR? 37834 NR_003007 677773 Hs.689695 NR_003007 ENSG00000251869 SCARNA23 ACA12 small Cajal body-specific RNA 23 ncRNA chr1-763 chr1 33163656 33163900 + 17.8 0.000 intron (NM_018207, intron 2 of 4) intron (NM_018207, intron 2 of 4) 12772 NM_001330483 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr9-1304 chr9 119631286 119631530 + 17.8 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -261973 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding chr12-1081 chr12 41557464 41557708 + 17.8 0.000 intron (NM_001164595, intron 7 of 9) intron (NM_001164595, intron 7 of 9) 119847 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr9-1019 chr9 135737697 135737941 + 17.8 0.000 intron (NM_020822, intron 2 of 30) MIRb|SINE|MIR 35634 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr9-529 chr9 98232143 98232387 + 17.8 0.000 intron (NR_051978, intron 3 of 11) intron (NR_051978, intron 3 of 11) -3048 NR_106913 102465514 NR_106913 ENSG00000278412 MIR6854 hsa-mir-6854 microRNA 6854 ncRNA chr20-491 chr20 37693520 37693764 + 17.8 0.000 promoter-TSS (NM_030877) promoter-TSS (NM_030877) -313 NM_001281495 56259 Hs.472667 NM_030877 ENSG00000132792 CTNNBL1 C20orf33|NAP|P14L|PP8304|dJ633O20.1 catenin beta like 1 protein-coding chr15-257 chr15 48878247 48878491 + 17.8 0.000 exon (NM_014335, exon 1 of 1) exon (NM_014335, exon 1 of 1) 235 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr3-1377 chr3 111803253 111803497 + 17.8 0.000 intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) -55805 NM_145753 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding chr17-856 chr17 39461592 39461836 + 17.8 0.000 5' UTR (NM_016507, exon 1 of 14) 5' UTR (NM_016507, exon 1 of 14) 228 NM_015083 51755 Hs.345028 NM_015083 ENSG00000167258 CDK12 CRK7|CRKR|CRKRS cyclin dependent kinase 12 protein-coding chr14-371 chr14 73260957 73261201 + 17.8 0.000 intron (NM_001365907, intron 16 of 25) intron (NM_001365907, intron 16 of 25) -15078 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr19-1040 chr19 1471603 1471847 + 17.8 0.000 3' UTR (NM_001351273, exon 14 of 14) 3' UTR (NM_001351273, exon 14 of 14) 7490 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr17-1367 chr17 61139286 61139530 + 17.8 0.000 intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 228296 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA chr5-913 chr5 115142264 115142508 + 17.8 0.000 intron (NM_001300752, intron 3 of 8) intron (NM_001300752, intron 3 of 8) 27522 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr16-500 chr16 535454 535698 + 17.8 0.000 TTS (NR_049852) TTS (NR_049852) 260 NR_049852 100847028 NR_049852 ENSG00000266124 MIR5587 - microRNA 5587 ncRNA chr17-437 chr17 8156296 8156540 + 17.8 0.000 Intergenic CpG -4014 NM_002616 5187 Hs.445534 NM_002616 ENSG00000179094 PER1 PER|RIGUI|hPER period circadian regulator 1 protein-coding chr1-2052 chr1 84303300 84303544 + 17.8 0.000 intron (NM_001134663, intron 2 of 3) intron (NM_001134663, intron 2 of 3) 771 NM_001134664 148418 Hs.591445 NM_001010971 ENSG00000203943 SAMD13 HSD-41|HSD-42 sterile alpha motif domain containing 13 protein-coding chr2-463 chr2 163348270 163348514 + 17.8 0.000 Intergenic CpG 387616 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr19-1254 chr19 42316470 42316714 + 17.8 0.000 intron (NM_001366910, intron 9 of 14) intron (NM_001366910, intron 9 of 14) 3283 NM_001366910 284339 Hs.382075 NM_173633 ENSG00000167619 TMEM145 - transmembrane protein 145 protein-coding chr11-1669 chr11 126115749 126115993 + 17.8 0.000 Intergenic Intergenic -52579 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr2-1628 chr2 23940945 23941189 + 17.8 0.000 intron (NM_181713, intron 1 of 6) intron (NM_181713, intron 1 of 6) 604 NM_181713 165324 Hs.591576 NM_181713 ENSG00000173960 UBXN2A UBXD4 UBX domain protein 2A protein-coding chr9-606 chr9 109012585 109012829 + 17.8 0.000 intron (NM_003798, intron 1 of 18) intron (NM_003798, intron 1 of 18) 792 NM_003798 8727 Hs.58488 NM_003798 ENSG00000119326 CTNNAL1 ACRP|CLLP|alpha-CATU catenin alpha like 1 protein-coding chr11-1681 chr11 132266044 132266288 + 17.8 0.000 intron (NM_016522, intron 3 of 6) intron (NM_016522, intron 3 of 6) -18136 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr15-436 chr15 75226130 75226374 + 17.8 0.000 TTS (NM_001321990) TTS (NM_001321990) 3438 NM_001321990 105376731 NM_001321990 LOC105376731 - taste receptor cell protein 1-like protein-coding chr2-1384 chr2 222196309 222196553 + 17.8 0.000 Intergenic Intergenic -101716 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA chr12-773 chr12 110501808 110502052 + 17.8 0.000 promoter-TSS (NM_001286535) promoter-TSS (NM_001286535) 181 NM_016226 51699 Hs.600114 NM_016226 ENSG00000111237 VPS29 DC15|DC7|PEP11 VPS29 retromer complex component protein-coding chr8-243 chr8 119855887 119856131 + 17.8 0.000 promoter-TSS (NM_024094) promoter-TSS (NM_024094) -115 NM_024094 79075 Hs.315167 NM_024094 ENSG00000136982 DSCC1 DCC1 DNA replication and sister chromatid cohesion 1 protein-coding chr17-112 chr17 27893155 27893399 + 17.8 0.000 promoter-TSS (NM_001076680) promoter-TSS (NM_001076680) 88 NM_001076680 201229 Hs.687951 NM_001076680 ENSG00000232859 LYRM9 C17orf108|HSD24 LYR motif containing 9 protein-coding chr16-627 chr16 5063287 5063531 + 17.8 0.000 intron (NM_001098514, intron 1 of 7) intron (NM_001098514, intron 1 of 7) 2736 NM_001098514 146556 Hs.11782 NM_152459 ENSG00000153446 C16orf89 - chromosome 16 open reading frame 89 protein-coding chr1-2400 chr1 60156917 60157161 + 17.8 0.000 Intergenic Intergenic -83269 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding chr7-1352 chr7 100629205 100629449 + 17.8 0.000 exon (NM_001206855, exon 7 of 15) exon (NM_001206855, exon 7 of 15) 4323 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr19-998 chr19 45823461 45823705 + 17.8 0.000 intron (NM_004819, intron 19 of 26) intron (NM_004819, intron 19 of 26) -8275 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding chr13-416 chr13 113208339 113208583 + 17.8 0.000 promoter-TSS (NM_001354944) promoter-TSS (NM_001354944) 208 NM_001353091 55795 Hs.508769 NM_018386 ENSG00000126226 PCID2 F10 PCI domain containing 2 protein-coding chr10-1100 chr10 18495047 18495291 + 17.8 0.000 intron (NM_201593, intron 3 of 13) L1ME4c|LINE|L1 94594 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr10-565 chr10 775703 775947 + 17.8 0.000 Intergenic Intergenic -86157 NM_014974 22982 Hs.432397 NM_014974 ENSG00000151240 DIP2C KIAA0934 disco interacting protein 2 homolog C protein-coding chr4-1017 chr4 88017881 88018125 + 17.8 0.000 intron (NR_156488, intron 1 of 13) intron (NR_156488, intron 1 of 13) 10368 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr11-1564 chr11 69499584 69499828 + 17.8 0.000 Intergenic Intergenic 14145 NR_120545 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA chr5-1149 chr5 149962099 149962343 + 17.8 0.000 intron (NM_000112, intron 1 of 2) intron (NM_000112, intron 1 of 2) 1484 NM_000112 1836 Hs.302738 NM_000112 ENSG00000155850 SLC26A2 D5S1708|DTD|DTDST|EDM4|MST153|MSTP157 solute carrier family 26 member 2 protein-coding chr6-1039 chr6 106692045 106692289 + 17.8 0.000 Intergenic Intergenic -3318 NR_149100 105377926 Hs.635821 NR_149100 ENSG00000229654 LINC02526 - long intergenic non-protein coding RNA 2526 ncRNA chr3-392 chr3 31981437 31981681 + 17.8 0.000 promoter-TSS (NM_001137674) promoter-TSS (NM_001137674) -191 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding chr2-513 chr2 161160973 161161217 + 17.8 0.000 intron (NM_001199135, intron 1 of 7) intron (NM_001199135, intron 1 of 7) 667 NM_001199135 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding chr19-1335 chr19 10308505 10308749 + 17.8 0.000 exon (NM_001103167, exon 1 of 4) exon (NM_001103167, exon 1 of 4) 930 NM_001103167 100125288 Hs.709296 NM_001103167 ENSG00000220201 ZGLP1 GATAD3|GLP-1|GLP1 zinc finger GATA like protein 1 protein-coding chr10-644 chr10 71789327 71789571 + 17.8 0.000 intron (NM_022124, intron 43 of 67) intron (NM_022124, intron 43 of 67) -1298 NR_106974 102465689 NR_106974 ENSG00000274824 MIR7152 hsa-mir-7152 microRNA 7152 ncRNA chr19-1001 chr19 46625231 46625475 + 17.8 0.000 promoter-TSS (NM_000960) promoter-TSS (NM_000960) -264 NM_000960 5739 Hs.458324 NM_000960 ENSG00000160013 PTGIR IP|PRIPR prostaglandin I2 receptor protein-coding chrX-84 chrX 134915173 134915417 + 17.8 0.000 promoter-TSS (NM_019556) promoter-TSS (NM_019556) -38 NM_019556 56180 Hs.590789 NM_019556 ENSG00000101928 MOSPD1 DJ473B4 motile sperm domain containing 1 protein-coding chr2-559 chr2 86563299 86563543 + 17.8 0.000 promoter-TSS (NM_001005753) promoter-TSS (NM_001005753) 22 NM_016079 51652 Hs.591582 NM_016079 ENSG00000115561 CHMP3 CGI-149|NEDF|VPS24 charged multivesicular body protein 3 protein-coding chr6-972 chr6 42198049 42198293 + 17.8 0.000 Intergenic L2a|LINE|L2 -3215 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr2-900 chr2 24855768 24856012 + 17.8 0.000 intron (NM_001320613, intron 3 of 21) intron (NM_001320613, intron 3 of 21) 62465 NR_136183 79172 Hs.731569 NM_024322 ENSG00000138092 CENPO CENP-O|ICEN-36|MCM21R centromere protein O protein-coding chr3-581 chr3 49705441 49705685 + 17.8 0.000 non-coding (NR_135218, exon 24 of 39) non-coding (NR_135218, exon 24 of 39) 14121 NM_198722 386724 Hs.567903 NM_198722 ENSG00000176020 AMIGO3 ALI3|AMIGO-3 adhesion molecule with Ig like domain 3 protein-coding chr1-893 chr1 212414655 212414899 + 17.8 0.000 5' UTR (NM_018252, exon 1 of 8) 5' UTR (NM_018252, exon 1 of 8) 109 NM_018252 55248 Hs.445386 NM_018252 ENSG00000065600 PACC1 C1orf75|PAC|TMEM206 proton activated chloride channel 1 protein-coding chr4-391 chr4 1801850 1802094 + 17.8 0.000 exon (NM_000142, exon 7 of 18) exon (NM_000142, exon 7 of 18) 8660 NM_001163213 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-649 chr12 54370221 54370465 + 17.8 0.000 exon (NM_001290001, exon 6 of 6) exon (NM_001290001, exon 6 of 6) -5857 NM_020370 53831 Hs.306199 NM_020370 ENSG00000139572 GPR84 EX33|GPCR4 G protein-coupled receptor 84 protein-coding chr8-860 chr8 42195277 42195521 + 17.8 0.000 intron (NM_001319189, intron 1 of 11) intron (NM_001319189, intron 1 of 11) 12166 NM_000930 5327 Hs.491582 NM_000930 ENSG00000104368 PLAT T-PA|TPA plasminogen activator, tissue type protein-coding chr2-797 chr2 217289901 217290145 + 17.8 0.000 intron (NR_026597, intron 12 of 12) intron (NR_026597, intron 12 of 12) 7290 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr1-2450 chr1 94045650 94045894 + 17.8 0.000 intron (NM_000350, intron 19 of 49) intron (NM_000350, intron 19 of 49) 75376 NM_000350 24 Hs.416707 NM_000350 ENSG00000198691 ABCA4 ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1 ATP binding cassette subfamily A member 4 protein-coding chr1-1443 chr1 220089677 220089921 + 17.8 0.000 promoter-TSS (NM_001286149) promoter-TSS (NM_001286149) -11 NM_001286149 10380 Hs.406134 NM_006085 ENSG00000162813 BPNT1 HEL20|PIP 3'(2'), 5'-bisphosphate nucleotidase 1 protein-coding chr19-1568 chr19 30337305 30337549 + 17.8 0.000 Intergenic Intergenic -34957 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding chr5-744 chr5 53560732 53560976 + 17.8 0.000 intron (NR_134474, intron 1 of 5) CpG 215 NR_134475 4724 Hs.528222 NM_002495 ENSG00000164258 NDUFS4 AQDQ|CI-18|CI-18 kDa|CI-AQDQ|MC1DN1 NADH:ubiquinone oxidoreductase subunit S4 protein-coding chr17-1074 chr17 81545219 81545463 + 17.8 0.000 intron (NR_033338, intron 6 of 8) intron (NR_033338, intron 6 of 8) 7012 NR_033338 80233 Hs.313905 NM_025161 ENSG00000185504 FAAP100 C17orf70 FA core complex associated protein 100 protein-coding chr2-840 chr2 55693788 55694032 + 17.8 0.000 promoter-TSS (NM_033109) promoter-TSS (NM_033109) -66 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding chr6-360 chr6 108270054 108270298 + 17.8 0.000 Intergenic SVA_A|Retroposon|SVA -9136 NM_001300929 8724 Hs.12102 NM_003795 ENSG00000112335 SNX3 Grd19|MCOPS8|SDP3 sorting nexin 3 protein-coding chr12-1197 chr12 104459182 104459426 + 17.8 0.000 intron (NM_018413, intron 1 of 2) intron (NM_018413, intron 1 of 2) 2356 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr4-530 chr4 83110028 83110272 + 17.8 0.000 promoter-TSS (NM_001130716) promoter-TSS (NM_001130716) -261 NM_001130716 51316 Hs.546392 NM_016619 ENSG00000145287 PLAC8 C15|DGIC|PNAS-144|onzin placenta associated 8 protein-coding chr10-1282 chr10 112732380 112732624 + 17.8 0.000 intron (NM_001365713, intron 8 of 8) intron (NM_001365713, intron 8 of 8) -90994 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA chr5-917 chr5 123305202 123305446 + 17.8 0.000 Intergenic LTR78B|LTR|ERV1 118268 NM_001166226 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding chr9-1268 chr9 98191194 98191438 + 17.8 0.000 intron (NM_052820, intron 1 of 11) intron (NM_052820, intron 1 of 11) 1321 NM_052820 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding chr2-1271 chr2 85318514 85318758 + 17.8 0.000 3' UTR (NM_006464, exon 4 of 4) 3' UTR (NM_006464, exon 4 of 4) 9353 NM_006464 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr1-2283 chr1 21534960 21535204 + 17.8 0.000 intron (NM_001177520, intron 1 of 9) L2a|LINE|L2 -16188 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr18-277 chr18 41650022 41650266 + 17.8 0.000 Intergenic Intergenic -129467 NR_002838 641516 Hs.116612 NR_002838 ENSG00000267313 KC6 - keratoconus gene 6 ncRNA chr19-1449 chr19 3303139 3303383 + 17.8 0.000 Intergenic AluJo|SINE|Alu -56369 NM_205843 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr4-227 chr4 184474542 184474786 + 17.8 0.000 promoter-TSS (NM_002199) promoter-TSS (NM_002199) -114 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr16-876 chr16 85390895 85391139 + 17.8 0.000 Intergenic Intergenic -84692 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr7-288 chr7 5556703 5556947 + 17.8 0.000 Intergenic Intergenic -26224 NM_001101 60 Hs.520640 NM_001101 ENSG00000075624 ACTB BRWS1|PS1TP5BP1 actin beta protein-coding chr2-1253 chr2 69567850 69568094 + 17.8 0.000 intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) -47801 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr12-518 chr12 49555593 49555837 + 17.8 0.000 exon (NM_001314030, exon 12 of 15) exon (NM_001314030, exon 12 of 15) 10724 NM_001012300 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr10-712 chr10 178615 178859 + 17.8 0.000 intron (NM_001370109, intron 1 of 13) intron (NM_001370109, intron 1 of 13) -1257 NM_001202467 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr11-977 chr11 12410257 12410501 + 17.8 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 32808 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chrX-276 chrX 5726357 5726601 + 17.8 0.000 Intergenic LTR8|LTR|ERV1 -499879 NR_136577 105373156 Hs.21107 NR_136577 LOC105373156 - uncharacterized LOC105373156 ncRNA chr6-926 chr6 22025726 22025970 + 17.8 0.000 intron (NR_015410, intron 7 of 11) intron (NR_015410, intron 7 of 11) 121345 NR_034143 729177 Hs.730673 NR_034143 ENSG00000260455 NBAT1 CASC14|NBAT-1 neuroblastoma associated transcript 1 ncRNA chr9-885 chr9 36207584 36207828 + 17.8 0.000 intron (NM_001184761, intron 4 of 4) intron (NM_001184761, intron 4 of 4) 16785 NM_001833 1211 Hs.522114 NM_001833 ENSG00000122705 CLTA LCA clathrin light chain A protein-coding chr1-2059 chr1 109623691 109623935 + 17.8 0.000 promoter-TSS (NM_001257361) promoter-TSS (NM_001257361) -175 NM_001257361 271 Hs.82927 NM_004037 ENSG00000116337 AMPD2 PCH9|SPG63 adenosine monophosphate deaminase 2 protein-coding chr7-1315 chr7 73762086 73762330 + 17.8 0.000 Intergenic Intergenic 8062 NM_001306 1365 Hs.647023 NM_001306 ENSG00000165215 CLDN3 C7orf1|CPE-R2|CPETR2|HRVP1|RVP1 claudin 3 protein-coding chr7-1277 chr7 44466313 44466557 + 17.8 0.000 intron (NM_015332, intron 2 of 5) intron (NM_015332, intron 2 of 5) 24223 NM_015332 23386 Hs.488171 NM_015332 ENSG00000015676 NUDCD3 NudCL NudC domain containing 3 protein-coding chr7-493 chr7 151246177 151246421 + 17.8 0.000 intron (NM_003078, intron 2 of 13) intron (NM_003078, intron 2 of 13) 2395 NM_001003801 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr12-476 chr12 74537738 74537982 + 17.8 0.000 promoter-TSS (NM_001136262) promoter-TSS (NM_001136262) 25 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr16-1205 chr16 85654636 85654880 + 17.8 0.000 intron (NM_001278184, intron 3 of 14) intron (NM_001278184, intron 3 of 14) 34196 NM_016095 51659 Hs.433180 NM_016095 ENSG00000131153 GINS2 HSPC037|PSF2|Pfs2 GINS complex subunit 2 protein-coding chr1-2240 chr1 12776720 12776964 + 17.8 0.000 intron (NM_001080830, intron 2 of 2) intron (NM_001080830, intron 2 of 2) 1994 NM_001080830 390999 Hs.156406 NM_001080830 ENSG00000116726 PRAMEF12 - PRAME family member 12 protein-coding chr5-867 chr5 12388145 12388389 + 17.8 0.000 Intergenic AluSc8|SINE|Alu -186590 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA chr10-617 chr10 12433271 12433515 + 17.8 0.000 intron (NM_001351032, intron 3 of 11) intron (NM_001351032, intron 3 of 11) 44411 NM_001351032 57118 Hs.600547 NM_020397 ENSG00000183049 CAMK1D CKLiK|CaM-K1|CaMKID calcium/calmodulin dependent protein kinase ID protein-coding chr9-1179 chr9 16032119 16032363 + 17.8 0.000 Intergenic Intergenic 220866 NM_001271829 100129385 Hs.586441 NM_001271829 ENSG00000205549 C9orf92 Em:AL513424.1 chromosome 9 open reading frame 92 protein-coding chr9-1078 chr9 83155562 83155806 + 17.8 0.000 Intergenic Intergenic -92542 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding chr21-56 chr21 43776030 43776274 + 17.8 0.000 intron (NM_000100, intron 1 of 2) CpG 223 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr1-2265 chr1 18854337 18854581 + 17.8 0.000 exon (NM_152232, exon 3 of 6) exon (NM_152232, exon 3 of 6) 5202 NM_152232 80834 Hs.553548 NM_152232 ENSG00000179002 TAS1R2 GPR71|T1R2|TR2 taste 1 receptor member 2 protein-coding chr16-677 chr16 85860700 85860944 + 17.8 0.000 Intergenic Intergenic -38340 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding chr11-1667 chr11 125903006 125903250 + 17.8 0.000 promoter-TSS (NM_001330438) promoter-TSS (NM_001330438) 78 NM_031307 83480 Hs.660922 NM_031307 ENSG00000110060 PUS3 2610020J05Rik|FKSG32|MRT55 pseudouridine synthase 3 protein-coding chr3-1318 chr3 58179909 58180153 + 17.8 0.000 Intergenic Intergenic -9396 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr9-628 chr9 136821348 136821592 + 17.8 0.000 intron (NM_001173989, intron 1 of 7) CpG -9487 NR_036251 100422860 NR_036251 ENSG00000265806 MIR4292 - microRNA 4292 ncRNA chr11-702 chr11 2298443 2298687 + 17.8 0.000 intron (NM_001329958, intron 3 of 3) intron (NM_001329958, intron 3 of 3) 3353 NM_001329958 29125 Hs.559181 NM_014144 ENSG00000110665 C11orf21 - chromosome 11 open reading frame 21 protein-coding chr16-633 chr16 11561201 11561445 + 17.8 0.000 intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 25050 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding chr4-327 chr4 76949694 76949938 + 17.8 0.000 promoter-TSS (NM_018243) promoter-TSS (NM_018243) 64 NM_018243 55752 Hs.128199 NM_018243 ENSG00000138758 SEPTIN11 SEPT11 septin 11 protein-coding chr12-928 chr12 1587944 1588188 + 17.8 0.000 intron (NM_152441, intron 1 of 1) intron (NM_152441, intron 1 of 1) 6515 NM_152441 144699 Hs.367956 NM_152441 ENSG00000171823 FBXL14 Fbl14 F-box and leucine rich repeat protein 14 protein-coding chr2-1471 chr2 54510409 54510653 + 17.8 0.000 intron (NM_003128, intron 1 of 35) intron (NM_003128, intron 1 of 35) -18691 NR_002229 56969 Hs.657366 NM_020217 RPL23AP32 RPL23A_9_220 ribosomal protein L23a pseudogene 32 pseudo chr19-989 chr19 42291996 42292240 + 17.8 0.000 exon (NM_015125, exon 12 of 20) exon (NM_015125, exon 12 of 20) 7453 NM_015125 23152 Hs.388236 NM_015125 ENSG00000079432 CIC MRD45 capicua transcriptional repressor protein-coding chr8-950 chr8 124690106 124690350 + 17.8 0.000 intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 38245 NM_001363299 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding chr2-399 chr2 96868614 96868858 + 17.8 0.000 intron (NM_017789, intron 1 of 14) CpG 1344 NM_017789 54910 Hs.516220 NM_017789 ENSG00000168758 SEMA4C M-SEMA-F|SEMACL1|SEMAF|SEMAI semaphorin 4C protein-coding chr1-2492 chr1 119872802 119873046 + 17.8 0.000 Intergenic Intergenic 23591 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr8-905 chr8 86343014 86343258 + 17.8 0.000 intron (NM_007013, intron 1 of 24) CpG 589 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding chr2-1150 chr2 204604153 204604397 + 17.8 0.000 intron (NM_205863, intron 1 of 21) intron (NM_205863, intron 1 of 21) 58800 NM_057177 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr12-986 chr12 93752286 93752530 + 17.8 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -14585 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr19-1077 chr19 17334688 17334932 + 17.8 0.000 promoter-TSS (NM_020959) promoter-TSS (NM_020959) 45 NM_020959 57719 Hs.590990 NM_020959 ENSG00000074855 ANO8 KIAA1623|TMEM16H anoctamin 8 protein-coding chr16-631 chr16 8960138 8960382 + 17.8 0.000 intron (NM_003470, intron 1 of 30) intron (NM_003470, intron 1 of 30) 3646 NM_003470 7874 Hs.386939 NM_003470 ENSG00000187555 USP7 HAUSP|TEF1 ubiquitin specific peptidase 7 protein-coding chr9-1341 chr9 128702467 128702711 + 17.8 0.000 promoter-TSS (NM_001317926) promoter-TSS (NM_001317926) 86 NM_013355 29941 Hs.300485 NM_013355 ENSG00000160447 PKN3 UTDP4-1 protein kinase N3 protein-coding chr9-748 chr9 136740310 136740554 + 17.8 0.000 intron (NR_160517, intron 2 of 3) intron (NR_160517, intron 2 of 3) 2508 NR_160517 414332 Hs.98132 NM_001001712 ENSG00000187922 LCN10 - lipocalin 10 protein-coding chr1-399 chr1 224929666 224929910 + 17.8 0.000 5' UTR (NM_001367481, exon 1 of 8) 5' UTR (NM_001367481, exon 1 of 8) 113 NM_001349911 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr2-1317 chr2 151261254 151261498 + 17.8 0.000 intron (NM_198557, intron 1 of 3) CpG 487 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-937 chr2 46770593 46770837 + 17.8 0.000 Intergenic Intergenic -45953 NR_034099 388948 Hs.728895 NR_034099 ENSG00000222005 LINC01118 - long intergenic non-protein coding RNA 1118 ncRNA chr16-647 chr16 31180624 31180868 + 17.8 0.000 intron (NM_004960, intron 1 of 14) CpG 636 NM_001170634 2521 Hs.46894 NM_004960 ENSG00000089280 FUS ALS6|ETM4|FUS1|HNRNPP2|POMP75|TLS FUS RNA binding protein protein-coding chr8-863 chr8 42543211 42543455 + 17.8 0.000 intron (NM_001363186, intron 1 of 3) MamRTE1|LINE|RTE-BovB -1379 NM_006749 6575 Hs.653173 NM_006749 ENSG00000168575 SLC20A2 GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 solute carrier family 20 member 2 protein-coding chrX-153 chrX 24117276 24117520 + 17.8 0.000 Intergenic L1MEf|LINE|L1 -31584 NM_001330327 7543 Hs.336681 NM_003410 ENSG00000005889 ZFX ZNF926 zinc finger protein X-linked protein-coding chrX-523 chrX 115023068 115023312 + 17.8 0.000 Intergenic Intergenic -5574 NM_000640 3598 Hs.336046 NM_000640 ENSG00000123496 IL13RA2 CD213A2|CT19|IL-13R|IL13BP interleukin 13 receptor subunit alpha 2 protein-coding chr3-443 chr3 47848988 47849232 + 17.8 0.000 promoter-TSS (NR_031595) promoter-TSS (NR_031595) -445 NR_031595 100302232 NR_031595 ENSG00000221585 MIR1226 MIRN1226|hsa-mir-1226|mir-1226 microRNA 1226 ncRNA chr3-966 chr3 50563739 50563983 + 17.8 0.000 intron (NM_001171743, intron 2 of 4) intron (NM_001171743, intron 2 of 4) 3886 NM_001171743 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr22-647 chr22 30909461 30909705 + 17.8 0.000 intron (NR_146603, intron 2 of 2) intron (NR_146603, intron 2 of 2) 12196 NR_146603 107985544 Hs.638287 NR_146603 LOC107985544 - uncharacterized LOC107985544 ncRNA chr15-148 chr15 39919775 39920019 + 17.8 0.000 exon (NM_007223, exon 1 of 3) exon (NM_007223, exon 1 of 3) 995 NM_001271854 11245 Hs.37196 NM_007223 ENSG00000166073 GPR176 HB-954 G protein-coupled receptor 176 protein-coding chr9-864 chr9 22084603 22084847 + 17.8 0.000 intron (NR_003529, intron 12 of 18) intron (NR_003529, intron 12 of 18) -75412 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr11-1374 chr11 288411 288655 + 17.8 0.000 promoter-TSS (NM_025092) promoter-TSS (NM_025092) -593 NM_025092 80162 Hs.353181 NM_025092 ENSG00000142102 PGGHG ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase protein-coding chr17-1434 chr17 80187298 80187542 + 17.8 0.000 promoter-TSS (NM_052819) promoter-TSS (NM_052819) -380 NM_052819 79092 Hs.675480 NM_024110 ENSG00000141527 CARD14 BIMP2|CARMA2|PRP|PSORS2|PSS1 caspase recruitment domain family member 14 protein-coding chr1-2431 chr1 86757677 86757921 + 17.8 0.000 Intergenic Intergenic 53223 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding chr16-749 chr16 86567259 86567503 + 17.8 0.000 exon (NM_005251, exon 1 of 1) exon (NM_005251, exon 1 of 1) 380 NR_125795 103752587 Hs.609366 NR_125795 ENSG00000260944 FOXC2-AS1 ODRUL FOXC2 antisense RNA 1 ncRNA chr10-891 chr10 96511120 96511364 + 17.8 0.000 intron (NM_012465, intron 1 of 20) intron (NM_012465, intron 1 of 20) 2684 NM_012465 7093 Hs.154296 NM_012465 ENSG00000095587 TLL2 - tolloid like 2 protein-coding chr14-358 chr14 35384370 35384614 + 17.8 0.000 Intergenic MLT1N2|LTR|ERVL-MaLR 20262 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr2-758 chr2 83694305 83694549 + 17.8 0.000 Intergenic AluSx1|SINE|Alu 171613 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA chr2-1055 chr2 240742220 240742464 + 17.8 0.000 intron (NM_004321, intron 32 of 46) intron (NM_004321, intron 32 of 46) 50476 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr19-822 chr19 42176382 42176626 + 17.7 0.000 Intergenic (CTCCG)n|Simple_repeat|Simple_repeat 41173 NR_073049 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr15-446 chr15 25933968 25934212 + 17.7 0.000 intron (NR_040082, intron 1 of 4) intron (NR_040082, intron 1 of 4) 31730 NR_040082 100128714 Hs.587854 NR_040082 ENSG00000206187 LINC02346 - long intergenic non-protein coding RNA 2346 ncRNA chr2-1855 chr2 161423397 161423641 + 17.7 0.000 exon (NM_006593, exon 6 of 6) exon (NM_006593, exon 6 of 6) 7222 NM_006593 10716 Hs.210862 NM_006593 ENSG00000136535 TBR1 IDDAS|TBR-1|TES-56 T-box brain transcription factor 1 protein-coding chr6-231 chr6 125790638 125790882 + 17.7 0.000 promoter-TSS (NM_001122842) promoter-TSS (NM_001122842) -200 NM_001122842 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr17-1126 chr17 33781509 33781753 + 17.7 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -247871 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo chr22-344 chr22 20242486 20242730 + 17.7 0.000 exon (NM_023004, exon 2 of 2) exon (NM_023004, exon 2 of 2) 6603 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr4-745 chr4 128461408 128461652 + 17.7 0.000 intron (NR_125882, intron 1 of 8) intron (NR_125882, intron 1 of 8) 33514 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr6-322 chr6 87152356 87152600 + 17.7 0.000 Intergenic CpG -3087 NM_001351444 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr2-1162 chr2 230902426 230902670 + 17.7 0.000 intron (NR_038238, intron 3 of 3) MamGypLTR3a|LTR|Gypsy 16002 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr15-701 chr15 77614256 77614500 + 17.7 0.000 exon (NM_001301195, exon 4 of 4) exon (NM_001301195, exon 4 of 4) 18534 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr2-1585 chr2 240566638 240566882 + 17.7 0.000 Intergenic Intergenic -1724 NM_018226 57140 Hs.5345 NM_018226 ENSG00000142327 RNPEPL1 - arginyl aminopeptidase like 1 protein-coding chr5-1009 chr5 34839132 34839376 + 17.7 0.000 promoter-TSS (NM_144725) promoter-TSS (NM_144725) 90 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding chr1-1636 chr1 4724198 4724442 + 17.7 0.000 intron (NM_018836, intron 2 of 5) intron (NM_018836, intron 2 of 5) 69711 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr22-364 chr22 18528553 18528797 + 17.7 0.000 exon (NM_001242313, exon 2 of 9) exon (NM_001242313, exon 2 of 9) 873 NM_001242313 728229 Hs.376511 NM_001242313 ENSG00000278558 TMEM191B - transmembrane protein 191B protein-coding chr15-523 chr15 84864299 84864543 + 17.7 0.000 intron (NM_020778, intron 11 of 13) intron (NM_020778, intron 11 of 13) -20240 NM_001287761 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr1-1135 chr1 16499019 16499263 + 17.7 0.000 Intergenic CpG -6440 NR_023386 114819 Hs.597881 NR_023386 ENSG00000080947 CROCCP3 CROCCL2|dJ798A10.2 CROCC pseudogene 3 pseudo chr16-515 chr16 28974124 28974368 + 17.7 0.000 promoter-TSS (NM_001142448) promoter-TSS (NM_001142448) -532 NM_001142448 83985 Hs.617449 NM_032038 ENSG00000169682 SPNS1 HSpin1|LAT|PP2030|SLC62A1|SPIN1|SPINL|nrs sphingolipid transporter 1 (putative) protein-coding chr10-827 chr10 44576909 44577153 + 17.7 0.000 Intergenic Intergenic -191934 NM_199168 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr9-937 chr9 111525156 111525400 + 17.7 0.000 promoter-TSS (NM_001007169) promoter-TSS (NM_001007169) 99 NM_133464 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding chr19-1286 chr19 49624790 49625034 + 17.7 0.000 exon (NM_020719, exon 12 of 14) exon (NM_020719, exon 12 of 14) 15231 NM_006270 6237 Hs.515536 NM_006270 ENSG00000126458 RRAS R-Ras RAS related protein-coding chr1-2658 chr1 226677174 226677418 + 17.7 0.000 intron (NM_002221, intron 2 of 7) intron (NM_002221, intron 2 of 7) -2228 NR_103784 100506443 Hs.664293 NR_103784 ITPKB-IT1 - ITPKB intronic transcript 1 ncRNA chr6-503 chr6 36387907 36388151 + 17.7 0.000 promoter-TSS (NM_001207039) promoter-TSS (NM_001207039) -229 NM_001207036 51513 Hs.272398 NM_016135 ENSG00000010030 ETV7 TEL-2|TEL2|TELB ETS variant 7 protein-coding chr14-568 chr14 89137585 89137829 + 17.7 0.000 Intergenic Intergenic 279526 NM_005197 1112 Hs.434286 NM_005197 ENSG00000053254 FOXN3 C14orf116|CHES1|PRO1635 forkhead box N3 protein-coding chr10-903 chr10 101061787 101062031 + 17.7 0.000 non-coding (NR_135067, exon 1 of 5) non-coding (NR_135067, exon 1 of 5) 667 NR_135067 81621 Hs.534859 NM_030929 ENSG00000107821 KAZALD1 BONO1|FKSG28|FKSG40|IGFBP-rP10 Kazal type serine peptidase inhibitor domain 1 protein-coding chr12-624 chr12 22544451 22544695 + 17.7 0.000 promoter-TSS (NM_001286175) promoter-TSS (NM_001286175) -27 NM_001286173 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding chr20-306 chr20 63628309 63628553 + 17.7 0.000 non-coding (NR_132418, exon 2 of 2) non-coding (NR_132418, exon 2 of 2) 1196 NR_132418 100505771 Hs.448392 NR_132417 ENSG00000232442 MHENCR - melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 ncRNA chr14-201 chr14 103075769 103076013 + 17.7 0.000 Intergenic (CCGCAG)n|Simple_repeat|Simple_repeat -8319 NM_001330236 107984640 NM_001330236 ENSG00000283071 LBHD2 - LBH domain containing 2 protein-coding chr6-208 chr6 53348647 53348891 + 17.7 0.000 5' UTR (NM_001301856, exon 1 of 8) 5' UTR (NM_001301856, exon 1 of 8) 181 NM_021814 60481 Hs.520189 NM_021814 ENSG00000012660 ELOVL5 HELO1|SCA38|dJ483K16.1 ELOVL fatty acid elongase 5 protein-coding chr22-306 chr22 36454961 36455205 + 17.7 0.000 Intergenic CpG 26557 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr20-649 chr20 62353716 62353960 + 17.7 0.000 intron (NR_109922, intron 1 of 2) intron (NR_109922, intron 1 of 2) 828 NR_109924 101928158 Hs.473256 NR_109922 ENSG00000228812 LAMA5-AS1 - LAMA5 antisense RNA 1 ncRNA chr5-1195 chr5 179165718 179165962 + 17.7 0.000 intron (NM_014244, intron 5 of 21) intron (NM_014244, intron 5 of 21) 105467 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr6-830 chr6 91499618 91499862 + 17.7 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -21920 NR_039786 100616174 NR_039786 ENSG00000263734 MIR4643 - microRNA 4643 ncRNA chr7-811 chr7 2384806 2385050 + 17.7 0.000 Intergenic G-rich|Low_complexity|Low_complexity -18683 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr10-583 chr10 72692608 72692852 + 17.7 0.000 5' UTR (NM_001270680, exon 1 of 8) 5' UTR (NM_001270680, exon 1 of 8) 111 NM_001270680 90550 Hs.591366 NM_138357 ENSG00000156026 MCU C10orf42|CCDC109A|HsMCU mitochondrial calcium uniporter protein-coding chr11-1036 chr11 131749194 131749438 + 17.7 0.000 intron (NM_001352006, intron 2 of 9) MIRb|SINE|MIR -85760 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA chr19-688 chr19 29606011 29606255 + 17.7 0.000 promoter-TSS (NM_006627) promoter-TSS (NM_006627) -150 NM_006627 10775 Hs.412870 NM_006627 ENSG00000105171 POP4 RPP29 POP4 homolog, ribonuclease P/MRP subunit protein-coding chr2-1742 chr2 75646702 75646946 + 17.7 0.000 promoter-TSS (NM_014763) promoter-TSS (NM_014763) 41 NM_014763 9801 Hs.44024 NM_014763 ENSG00000115364 MRPL19 L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15 mitochondrial ribosomal protein L19 protein-coding chr5-852 chr5 179142896 179143140 + 17.7 0.000 intron (NM_014244, intron 10 of 21) L1MB7|LINE|L1 82645 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding chr19-667 chr19 4400126 4400370 + 17.7 0.000 intron (NM_003025, intron 1 of 9) CpG 299 NM_001199943 6455 Hs.97616 NM_003025 ENSG00000141985 SH3GL1 CNSA1|EEN|SH3D2B|SH3P8 SH3 domain containing GRB2 like 1, endophilin A2 protein-coding chr5-565 chr5 13601164 13601408 + 17.7 0.000 Intergenic Intergenic 343194 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding chr10-401 chr10 47329018 47329262 + 17.7 0.000 Intergenic Intergenic 6686 NM_016204 2658 Hs.279463 NM_016204 ENSG00000263761 GDF2 BMP-9|BMP9|HHT5 growth differentiation factor 2 protein-coding chr19-554 chr19 35775334 35775578 + 17.7 0.000 promoter-TSS (NM_052948) promoter-TSS (NM_052948) -108 NM_001172630 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr19-846 chr19 1465182 1465426 + 17.7 0.000 exon (NM_001351273, exon 14 of 14) exon (NM_001351273, exon 14 of 14) 12320 NM_001351273 10297 Hs.446376 NM_005883 ENSG00000115266 APC2 APCL APC regulator of WNT signaling pathway 2 protein-coding chr9-1346 chr9 129500483 129500727 + 17.7 0.000 intron (NR_038955, intron 2 of 4) intron (NR_038955, intron 2 of 4) 11945 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr9-877 chr9 35490889 35491133 + 17.7 0.000 intron (NM_001330740, intron 1 of 10) MER51C|LTR|ERV1 900 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding chr8-455 chr8 122638863 122639107 + 17.7 0.000 Intergenic Intergenic 55121 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA chrX-377 chrX 57121356 57121600 + 17.7 0.000 promoter-TSS (NM_001006683) promoter-TSS (NM_001006683) 68 NM_001006681 474343 Hs.460717 NM_001006681 ENSG00000186787 SPIN2B SPIN-2|SPIN-2B|SPIN2_duplicate|TDRD26|dJ323P24.2 spindlin family member 2B protein-coding chr9-1248 chr9 91752322 91752566 + 17.7 0.000 intron (NM_001318204, intron 4 of 7) L1ME2z|LINE|L1 -116099 NR_037489 100500902 NR_037489 ENSG00000283351 MIR3910-2 mir-3910-2 microRNA 3910-2 ncRNA chrX-546 chrX 130392344 130392588 + 17.7 0.000 Intergenic Intergenic -6929 NM_178471 139760 Hs.496762 NM_178471 ENSG00000147262 GPR119 GPCR2 G protein-coupled receptor 119 protein-coding chr4-500 chr4 3857272 3857516 + 17.7 0.000 Intergenic G-rich|Low_complexity|Low_complexity 91009 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr5-168 chr5 138087570 138087814 + 17.7 0.000 intron (NM_001300939, intron 2 of 4) intron (NM_001300939, intron 2 of 4) 3659 NM_001300939 7478 Hs.591274 NM_031933 ENSG00000061492 WNT8A WNT8D Wnt family member 8A protein-coding chr19-1055 chr19 4078025 4078269 + 17.7 0.000 Intergenic Intergenic -11248 NM_015898 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr12-863 chr12 79782373 79782617 + 17.7 0.000 intron (NM_001244990, intron 22 of 24) intron (NM_001244990, intron 22 of 24) -91398 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding chr3-743 chr3 64444085 64444329 + 17.7 0.000 Intergenic Intergenic -117139 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA chr17-1476 chr17 82381030 82381274 + 17.7 0.000 Intergenic L1ME4a|LINE|L1 6875 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr19-1506 chr19 10803463 10803707 + 17.7 0.000 intron (NM_001005362, intron 12 of 19) intron (NM_001005362, intron 12 of 19) 13911 NR_029586 406976 NR_029586 ENSG00000207752 MIR199A1 MIR-199-s|MIRN199A1|mir-199a-1 microRNA 199a-1 ncRNA chr7-787 chr7 128674961 128675205 + 17.7 0.000 intron (NM_001290255, intron 2 of 5) intron (NM_001290255, intron 2 of 5) 2791 NM_001012454 346653 Hs.445236 NM_001012454 ENSG00000205085 FAM71F2 FAM137B family with sequence similarity 71 member F2 protein-coding chr20-579 chr20 33316671 33316915 + 17.7 0.000 Intergenic Intergenic 33579 NM_033197 92747 Hs.65551 NM_033197 ENSG00000125999 BPIFB1 C20orf114|LPLUNC1 BPI fold containing family B member 1 protein-coding chr11-1592 chr11 74453656 74453900 + 17.7 0.000 Intergenic (ATAGAT)n|Simple_repeat|Simple_repeat 13777 NM_005472 10008 Hs.523899 NM_005472 ENSG00000175538 KCNE3 BRGDA6|HOKPP|HYPP|MiRP2 potassium voltage-gated channel subfamily E regulatory subunit 3 protein-coding chr10-1105 chr10 24344358 24344602 + 17.7 0.000 intron (NM_019590, intron 2 of 20) intron (NM_019590, intron 2 of 20) 68795 NR_030334 693188 NR_030334 ENSG00000207930 MIR603 MIRN603|hsa-mir-603 microRNA 603 ncRNA chr11-1161 chr11 69760683 69760927 + 17.7 0.000 Intergenic Intergenic 14536 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr11-1460 chr11 41245784 41246028 + 17.7 0.000 intron (NM_001258419, intron 1 of 6) MER52A|LTR|ERV1 213730 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr2-1776 chr2 100786215 100786459 + 17.7 0.000 Intergenic Intergenic -33802 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding chr7-952 chr7 47979394 47979638 + 17.7 0.000 promoter-TSS (NM_001363683) promoter-TSS (NM_001363683) 99 NM_001363683 3364 Hs.152983 NM_004507 ENSG00000136273 HUS1 hHUS1 HUS1 checkpoint clamp component protein-coding chr11-1294 chr11 61603052 61603296 + 17.7 0.000 intron (NR_110189, intron 3 of 3) intron (NR_110189, intron 3 of 3) -11862 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo chr22-678 chr22 37748206 37748450 + 17.7 0.000 intron (NM_138632, intron 1 of 7) intron (NM_138632, intron 1 of 7) 2094 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chr1-1666 chr1 17618226 17618470 + 17.7 0.000 promoter-TSS (NM_001328124) promoter-TSS (NM_001328124) 35 NM_001328124 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr10-1085 chr10 5856858 5857102 + 17.7 0.000 Intergenic Intergenic -32592 NM_001258452 84893 Hs.498543 NM_032807 ENSG00000134452 FBH1 FBXO18|Fbx18|hFBH1 F-box DNA helicase 1 protein-coding chr2-1633 chr2 24683488 24683732 + 17.7 0.000 intron (NM_001362950, intron 8 of 23) MER91A|DNA|hAT-Tip100 99133 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr22-451 chr22 41367311 41367555 + 17.7 0.000 promoter-TSS (NM_001145398) promoter-TSS (NM_001145398) 100 NM_001145398 7008 Hs.181159 NM_003216 ENSG00000167074 TEF - TEF transcription factor, PAR bZIP family member protein-coding chr3-1268 chr3 47417237 47417481 + 17.7 0.000 exon (NM_001320044, exon 14 of 20) exon (NM_001320044, exon 14 of 20) 36338 NM_001304482 25930 Hs.25524 NM_015466 ENSG00000076201 PTPN23 HD-PTP|HDPTP|PTP-TD14 protein tyrosine phosphatase non-receptor type 23 protein-coding chr3-788 chr3 153140739 153140983 + 17.7 0.000 Intergenic Helitron3Na_Mam|RC|Helitron -21365 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr17-737 chr17 3535491 3535735 + 17.7 0.000 exon (NM_145068, exon 7 of 18) exon (NM_145068, exon 7 of 18) -21761 NM_001321336 84690 Hs.351068 NM_032598 ENSG00000141255 SPATA22 NYD-SP20|NYDSP20 spermatogenesis associated 22 protein-coding chrX-544 chrX 130339923 130340167 + 17.7 0.000 intron (NM_001282198, intron 1 of 9) (GCCGG)n|Simple_repeat|Simple_repeat 126 NR_104107 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chr2-545 chr2 23656712 23656956 + 17.7 0.000 intron (NM_052920, intron 5 of 13) intron (NM_052920, intron 5 of 13) 270289 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding chr11-1034 chr11 126480687 126480931 + 17.7 0.000 intron (NM_001301097, intron 4 of 15) intron (NM_001301097, intron 4 of 15) 74722 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr9-583 chr9 137722576 137722820 + 17.7 0.000 intron (NM_001354263, intron 3 of 26) intron (NM_001354263, intron 3 of 26) 65708 NR_147508 651337 Hs.603195 NR_147508 ENSG00000255585 LOC651337 - uncharacterized LOC651337 ncRNA chr1-1921 chr1 212858706 212858950 + 17.7 0.000 promoter-TSS (NR_027285) promoter-TSS (NR_027285) 553 NM_014053 28982 Hs.7055 NM_014053 ENSG00000162769 FLVCR1 AXPC1|FLVCR|MFSD7B|PCA|PCARP|SLC49A1 feline leukemia virus subgroup C cellular receptor 1 protein-coding chr17-960 chr17 33291304 33291548 + 17.7 0.000 exon (NM_183377, exon 1 of 10) exon (NM_183377, exon 1 of 10) 1562 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr12-246 chr12 76031409 76031653 + 17.7 0.000 exon (NM_007350, exon 1 of 2) exon (NM_007350, exon 1 of 2) 245 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding chr7-1182 chr7 1494460 1494704 + 17.7 0.000 intron (NM_001080453, intron 14 of 47) intron (NM_001080453, intron 14 of 47) 9807 NM_001080453 26173 Hs.532188 NM_001080453 ENSG00000164880 INTS1 INT1|NET28 integrator complex subunit 1 protein-coding chr19-1285 chr19 49415538 49415782 + 17.7 0.000 intron (NM_144688, intron 17 of 19) intron (NM_144688, intron 17 of 19) 7781 NM_178449 113091 Hs.339845 NM_178449 ENSG00000142538 PTH2 TIP39 parathyroid hormone 2 protein-coding chr5-870 chr5 25330016 25330260 + 17.7 0.000 Intergenic Intergenic 139185 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr6-228 chr6 90587059 90587303 + 17.7 0.000 promoter-TSS (NM_003188) promoter-TSS (NM_003188) -109 NM_145331 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding chr9-801 chr9 121902466 121902710 + 17.7 0.000 intron (NM_001139442, intron 6 of 8) intron (NM_001139442, intron 6 of 8) 159803 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr4-688 chr4 39044336 39044580 + 17.7 0.000 promoter-TSS (NM_001007075) promoter-TSS (NM_001007075) -373 NM_001007075 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr2-1660 chr2 32964110 32964354 + 17.7 0.000 intron (NM_206943, intron 2 of 33) intron (NM_206943, intron 2 of 33) 17279 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr10-519 chr10 79381988 79382232 + 17.7 0.000 TTS (NM_153367) TTS (NM_153367) 34641 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr11-1090 chr11 45924317 45924561 + 17.7 0.000 intron (NM_152312, intron 4 of 13) intron (NM_152312, intron 4 of 13) 1783 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr6-701 chr6 87929845 87930089 + 17.7 0.000 Intergenic Intergenic -117874 NM_030960 81833 Hs.161241 NM_030960 ENSG00000118434 SPACA1 SAMP32 sperm acrosome associated 1 protein-coding chr2-1643 chr2 26896426 26896670 + 17.7 0.000 intron (NM_001253724, intron 1 of 12) L1MA8|LINE|L1 48124 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding chr5-1047 chr5 64533785 64534029 + 17.7 0.000 intron (NM_001029875, intron 2 of 5) L2a|LINE|L2 27892 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding chr10-993 chr10 57952814 57953058 + 17.7 0.000 Intergenic Intergenic 314958 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr19-1334 chr19 8655912 8656156 + 17.7 0.000 Intergenic Intergenic 42761 NM_178525 284382 Hs.209206 NM_178525 ENSG00000181786 ACTL9 HSD21 actin like 9 protein-coding chr15-503 chr15 68616500 68616744 + 17.7 0.000 promoter-TSS (NM_001190456) promoter-TSS (NM_001190456) 82 NM_001190456 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr3-575 chr3 48056449 48056693 + 17.7 0.000 intron (NM_002375, intron 1 of 18) SVA_F|Retroposon|SVA 32277 NM_002375 4134 Hs.517949 NM_002375 ENSG00000047849 MAP4 - microtubule associated protein 4 protein-coding chr1-661 chr1 170532153 170532397 + 17.7 0.000 non-coding (NR_027397, exon 1 of 5) non-coding (NR_027397, exon 1 of 5) 109 NM_001320252 92344 Hs.183702 NM_152281 ENSG00000120370 GORAB GO|NTKLBP1|SCYL1BP1 golgin, RAB6 interacting protein-coding chr1-2039 chr1 53526650 53526894 + 17.7 0.000 intron (NM_147193, intron 4 of 9) intron (NM_147193, intron 4 of 9) 67373 NM_033067 63948 Hs.131654 NM_033067 ENSG00000143006 DMRTB1 - DMRT like family B with proline rich C-terminal 1 protein-coding chr11-1404 chr11 3375623 3375867 + 17.7 0.000 intron (NM_001256825, intron 1 of 4) intron (NM_001256825, intron 1 of 4) 3401 NM_001242843 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding chr2-1622 chr2 20221746 20221990 + 17.7 0.000 intron (NM_001006946, intron 2 of 5) intron (NM_001006946, intron 2 of 5) 3262 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr2-1479 chr2 68251592 68251836 + 17.5 0.000 intron (NM_000945, intron 1 of 5) intron (NM_000945, intron 1 of 5) 818 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding chr16-764 chr16 543323 543567 + 17.5 0.000 TTS (NR_036137) TTS (NR_036137) 168 NR_036137 100423037 NR_036137 ENSG00000266235 MIR3176 mir-3176 microRNA 3176 ncRNA chr5-853 chr5 179230206 179230450 + 17.5 0.000 intron (NM_014244, intron 3 of 21) intron (NM_014244, intron 3 of 21) 115133 NM_021599 9509 Hs.23871 NM_014244 ENSG00000087116 ADAMTS2 ADAM-TS2|ADAMTS-2|ADAMTS-3|EDSDERMS|NPI|PC I-NP|PCI-NP|PCINP|PCPNI|PNPI ADAM metallopeptidase with thrombospondin type 1 motif 2 protein-coding chr10-883 chr10 91579684 91579928 + 17.5 0.000 intron (NR_024467, intron 1 of 4) intron (NR_024467, intron 1 of 4) 31654 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr6-953 chr6 35919625 35919869 + 17.5 0.000 intron (NR_034069, intron 2 of 15) intron (NR_034069, intron 2 of 15) 1351 NM_003137 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr6-928 chr6 24307948 24308192 + 17.5 0.000 intron (NM_016356, intron 2 of 9) intron (NM_016356, intron 2 of 9) -48833 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding chr19-488 chr19 11090394 11090638 + 17.5 0.000 promoter-TSS (NR_163945) promoter-TSS (NR_163945) -857 NR_163945 chr12-749 chr12 54259207 54259451 + 17.5 0.000 5' UTR (NM_001127322, exon 1 of 5) 5' UTR (NM_001127322, exon 1 of 5) 216 NM_001127322 23468 Hs.349283 NM_012117 ENSG00000094916 CBX5 HEL25|HP1|HP1A chromobox 5 protein-coding chr1-817 chr1 26501115 26501359 + 17.5 0.000 Intergenic CpG -28524 NM_002953 6195 Hs.149957 NM_002953 ENSG00000117676 RPS6KA1 HU-1|MAPKAPK1A|RSK|RSK1|p90Rsk ribosomal protein S6 kinase A1 protein-coding chr16-678 chr16 86517718 86517962 + 17.5 0.000 Intergenic Intergenic 7313 NM_001451 2294 Hs.155591 NM_001451 ENSG00000103241 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding chr6-1094 chr6 151493910 151494154 + 17.5 0.000 promoter-TSS (NM_025059) promoter-TSS (NM_025059) 15 NM_025059 80129 Hs.660044 NM_025059 ENSG00000120262 CCDC170 C6orf97|bA282P11.1 coiled-coil domain containing 170 protein-coding chr19-1376 chr19 42283124 42283368 + 17.5 0.000 intron (NM_001304815, intron 2 of 20) intron (NM_001304815, intron 2 of 20) -1419 NM_015125 23152 Hs.388236 NM_015125 ENSG00000079432 CIC MRD45 capicua transcriptional repressor protein-coding chr6-1125 chr6 166572495 166572739 + 17.5 0.000 intron (NM_001006932, intron 2 of 21) intron (NM_001006932, intron 2 of 21) -27927 NM_001318938 6196 Hs.655277 NM_021135 ENSG00000071242 RPS6KA2 HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3 ribosomal protein S6 kinase A2 protein-coding chr17-731 chr17 1999817 2000061 + 17.5 0.000 intron (NM_178568, intron 1 of 1) intron (NM_178568, intron 1 of 1) -17777 NR_135642 105371485 Hs.655867 NR_135642 ENSG00000228133 LOC105371485 - uncharacterized LOC105371485 ncRNA chr11-1202 chr11 111851715 111851959 + 17.5 0.000 intron (NR_147984, intron 8 of 15) intron (NR_147984, intron 8 of 15) 19444 NM_001352415 79796 Hs.745155 NM_024740 ENSG00000086848 ALG9 CDG1L|DIBD1|GIKANIS|LOH11CR1J ALG9 alpha-1,2-mannosyltransferase protein-coding chr19-1009 chr19 48645328 48645572 + 17.5 0.000 exon (NM_001217, exon 2 of 9) exon (NM_001217, exon 2 of 9) 737 NM_001217 770 Hs.428446 NM_001217 ENSG00000063180 CA11 CA-RP|CA-RP II|CA-XI|CARP-2|CARPX1 carbonic anhydrase 11 protein-coding chr17-1281 chr17 30376808 30377052 + 17.5 0.000 Intergenic Intergenic -1997 NM_001304 1362 Hs.446079 NM_001304 ENSG00000108582 CPD GP180 carboxypeptidase D protein-coding chr8-428 chr8 143314803 143315047 + 17.5 0.000 intron (NM_052963, intron 12 of 13) LTR13|LTR|ERVK 19955 NM_052963 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr1-2548 chr1 166477785 166478029 + 17.5 0.000 intron (NR_146890, intron 1 of 2) MER1A|DNA|hAT-Charlie 12132 NR_146890 105371590 Hs.575926 NR_146890 ENSG00000234142 LINC01675 - long intergenic non-protein coding RNA 1675 ncRNA chr11-653 chr11 10858035 10858279 + 17.5 0.000 promoter-TSS (NR_034137) promoter-TSS (NR_034137) -60 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA chr17-345 chr17 50478859 50479103 + 17.5 0.000 exon (NM_018346, exon 1 of 9) exon (NM_018346, exon 1 of 9) 121 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr8-951 chr8 124783969 124784213 + 17.5 0.000 Intergenic AluJb|SINE|Alu -37894 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA chr7-751 chr7 80611762 80612006 + 17.5 0.000 intron (NM_001371080, intron 1 of 10) MER90a|LTR|ERV1 9677 NM_001371074 chr5-516 chr5 178232765 178233009 + 17.5 0.000 promoter-TSS (NM_153373) promoter-TSS (NM_153373) -65 NR_103509 85007 Hs.248746 NM_153373 ENSG00000175309 PHYKPL AGXT2L2|PHLU 5-phosphohydroxy-L-lysine phospho-lyase protein-coding chr12-548 chr12 120495957 120496201 + 17.5 0.000 promoter-TSS (NR_038854) promoter-TSS (NR_038854) -34 NM_001037495 8655 Hs.5120 NM_003746 ENSG00000088986 DYNLL1 DLC1|DLC8|DNCL1|DNCLC1|LC8|LC8a|PIN|hdlc1 dynein light chain LC8-type 1 protein-coding KI270722.1-2 KI270722.1 177375 177619 + 17.5 0.000 NA NA NA NA chr20-149 chr20 62972412 62972656 + 17.5 0.000 Intergenic CpG 19825 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr8-856 chr8 41654204 41654448 + 17.5 0.000 3' UTR (NM_001142446, exon 43 of 43) 3' UTR (NM_001142446, exon 43 of 43) -3509 NM_001364841 157848 NM_152568 ENSG00000165066 NKX6-3 NKX6.3 NK6 homeobox 3 protein-coding chr7-561 chr7 36280882 36281126 + 17.5 0.000 intron (NM_030636, intron 3 of 7) intron (NM_030636, intron 3 of 7) 86236 NM_001199708 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr11-1652 chr11 119584174 119584418 + 17.5 0.000 Intergenic Intergenic 144904 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr6-898 chr6 6916832 6917076 + 17.5 0.000 Intergenic L2b|LINE|L2 -190789 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr6-648 chr6 5498074 5498318 + 17.5 0.000 intron (NM_006567, intron 4 of 6) intron (NM_006567, intron 4 of 6) -40121 NR_125848 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA chr11-1045 chr11 1346128 1346372 + 17.5 0.000 Intergenic Intergenic 36542 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr15-248 chr15 89912226 89912470 + 17.5 0.000 5' UTR (NM_001282380, exon 1 of 6) 5' UTR (NM_001282380, exon 1 of 6) 339 NM_001282380 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding chr10-372 chr10 102128018 102128262 + 17.5 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -4854 NM_001288727 23082 Hs.533551 NM_015062 ENSG00000148840 PPRC1 PRC PPARG related coactivator 1 protein-coding chr22-737 chr22 47059805 47060049 + 17.5 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -143885 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr6-1076 chr6 138099918 138100162 + 17.5 0.000 intron (NM_022121, intron 1 of 2) intron (NM_022121, intron 1 of 2) 7379 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 p53 apoptosis effector related to PMP22 protein-coding chr15-350 chr15 39593539 39593783 + 17.5 0.000 exon (NM_003246, exon 19 of 22) exon (NM_003246, exon 19 of 22) 12582 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr11-1223 chr11 119598704 119598948 + 17.5 0.000 Intergenic MIR|SINE|MIR 130374 NM_203286 5818 Hs.334846 NM_002855 ENSG00000110400 NECTIN1 CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1 nectin cell adhesion molecule 1 protein-coding chr9-736 chr9 135766262 135766506 + 17.5 0.000 intron (NM_001272003, intron 12 of 30) intron (NM_001272003, intron 12 of 30) 64199 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-1639 chr2 25343932 25344176 + 17.5 0.000 Intergenic MIRb|SINE|MIR -1464 NM_175629 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr11-612 chr11 64285954 64286198 + 17.5 0.000 5' UTR (NM_001170880, exon 1 of 7) 5' UTR (NM_001170880, exon 1 of 7) 228 NM_001170880 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr4-1027 chr4 94032888 94033132 + 17.5 0.000 Intergenic Intergenic 174546 NR_125922 101929210 Hs.518877 NR_125922 ENSG00000246541 LOC101929210 - uncharacterized LOC101929210 ncRNA chr7-705 chr7 24573886 24574130 + 17.5 0.000 intron (NM_001303037, intron 1 of 11) CpG 556 NM_016447 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr15-145 chr15 83067232 83067476 + 17.5 0.000 promoter-TSS (NM_025238) promoter-TSS (NM_025238) 19 NR_039740 100616404 NR_039740 ENSG00000263643 MIR4515 mir-4515 microRNA 4515 ncRNA chrX-561 chrX 150462764 150463008 + 17.5 0.000 intron (NM_005491, intron 2 of 6) MIR3|SINE|MIR 17432 NM_001177466 10046 Hs.20136 NM_005491 ENSG00000013619 MAMLD1 CG1|CXorf6|F18|HYSP2 mastermind like domain containing 1 protein-coding chr4-915 chr4 7956217 7956461 + 17.5 0.000 Intergenic Intergenic -16413 NM_198595 60312 Hs.529369 NM_021638 ENSG00000196526 AFAP1 AFAP|AFAP-110|AFAP110 actin filament associated protein 1 protein-coding chr21-223 chr21 26154469 26154713 + 17.5 0.000 intron (NM_001136131, intron 1 of 15) intron (NM_001136131, intron 1 of 15) -14201 NM_001136016 351 Hs.434980 NM_000484 ENSG00000142192 APP AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 amyloid beta precursor protein protein-coding chr2-1609 chr2 10120138 10120382 + 17.5 0.000 Intergenic CpG -2308 NM_001165931 6241 Hs.226390 NM_001034 ENSG00000171848 RRM2 R2|RR2|RR2M ribonucleotide reductase regulatory subunit M2 protein-coding chr2-985 chr2 127197892 127198136 + 17.5 0.000 intron (NM_001001665, intron 4 of 7) intron (NM_001001665, intron 4 of 7) 7753 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr19-639 chr19 47608117 47608361 + 17.5 0.000 promoter-TSS (NM_015711) promoter-TSS (NM_015711) 43 NM_015711 29998 Hs.97244 NM_015711 ENSG00000063169 BICRA GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein protein-coding chr1-2231 chr1 10795316 10795560 + 17.5 0.000 intron (NM_001079843, intron 1 of 20) CpG 1208 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr20-340 chr20 49373250 49373494 + 17.5 0.000 exon (NM_004975, exon 2 of 2) exon (NM_004975, exon 2 of 2) 92689 NR_003030 692057 NR_003030 ENSG00000212304 SNORD12 HBII-99|MIR1259|MIRN1259 small nucleolar RNA, C/D box 12 snoRNA chr12-1159 chr12 70994266 70994510 + 17.5 0.000 Intergenic Intergenic -73650 NM_002849 5801 Hs.506076 NM_002849 ENSG00000153233 PTPRR EC-PTP|PCPTP1|PTP-SL|PTPBR7|PTPRQ protein tyrosine phosphatase receptor type R protein-coding chr9-677 chr9 106864424 106864668 + 17.5 0.000 intron (NM_001347997, intron 1 of 12) intron (NM_001347997, intron 1 of 12) 1380 NM_021224 58499 Hs.370379 NM_021224 ENSG00000148143 ZNF462 ZFPIP|Zfp462 zinc finger protein 462 protein-coding chr6-552 chr6 129701697 129701941 + 17.5 0.000 intron (NM_033515, intron 1 of 14) intron (NM_033515, intron 1 of 14) 8358 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding chr13-454 chr13 39784687 39784931 + 17.5 0.000 intron (NM_001145079, intron 18 of 18) intron (NM_001145079, intron 18 of 18) -120674 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA chr2-1594 chr2 1974572 1974816 + 17.5 0.000 intron (NM_015025, intron 8 of 24) intron (NM_015025, intron 8 of 24) -230179 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr8-529 chr8 133287621 133287865 + 17.5 0.000 intron (NM_006096, intron 1 of 15) MER20|DNA|hAT-Charlie 9509 NM_001135242 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr3-836 chr3 49973345 49973589 + 17.5 0.000 intron (NM_001349192, intron 4 of 22) intron (NM_001349192, intron 4 of 22) 33317 NM_001167582 10180 Hs.696735 NM_005777 ENSG00000004534 RBM6 3G2|DEF-3|DEF3|HLC-11|NY-LU-12|g16 RNA binding motif protein 6 protein-coding chr6-1123 chr6 163302096 163302340 + 17.5 0.000 intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) 22255 NR_028390 285796 Hs.668693 NR_028390 ENSG00000281692 PACRG-AS1 - PACRG antisense RNA 1 ncRNA chr21-161 chr21 14058652 14058896 + 17.5 0.000 Intergenic G-rich|Low_complexity|Low_complexity -78330 NR_027270 391267 Hs.364456 NM_153750 ENSG00000215559 ANKRD20A11P C21orf81 ankyrin repeat domain 20 family member A11, pseudogene pseudo chrX-251 chrX 53594519 53594763 + 17.5 0.000 intron (NM_031407, intron 30 of 83) intron (NM_031407, intron 30 of 83) -37367 NR_029484 406889 NR_029484 ENSG00000208012 MIRLET7F2 LET7F2|MIRNLET7F2|let-7f-2 microRNA let-7f-2 ncRNA chr10-374 chr10 102777113 102777357 + 17.5 0.000 intron (NM_017787, intron 1 of 3) intron (NM_017787, intron 1 of 3) 1014 NM_017787 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr9-1111 chr9 123951784 123952028 + 17.5 0.000 Intergenic Intergenic -21768 NM_001352965 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding chr14-769 chr14 91250146 91250390 + 17.5 0.000 intron (NM_001348437, intron 1 of 2) intron (NM_001348437, intron 1 of 2) 3612 NM_001348437 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr4-682 chr4 29424102 29424346 + 17.5 0.000 Intergenic Intergenic 209932 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA chr18-122 chr18 77264116 77264360 + 17.5 0.000 intron (NM_001480, intron 2 of 2) intron (NM_001480, intron 2 of 2) 14390 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding chr2-1756 chr2 88436688 88436932 + 17.5 0.000 Intergenic L2b|LINE|L2 15883 NM_001135649 344167 Hs.131262 NM_001135649 ENSG00000214336 FOXI3 - forkhead box I3 protein-coding chr1-1076 chr1 155193129 155193373 + 17.5 0.000 promoter-TSS (NM_001044392) promoter-TSS (NM_001044392) -336 NM_001204286 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr12-841 chr12 56164501 56164745 + 17.5 0.000 exon (NM_003075, exon 27 of 28) exon (NM_003075, exon 27 of 28) 6264 NM_079423 4637 Hs.632717 NM_021019 ENSG00000092841 MYL6 ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3NM|MLC3SM myosin light chain 6 protein-coding chrX-170 chrX 129623062 129623306 + 17.5 0.000 Intergenic Intergenic 31772 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr6-629 chr6 146598806 146599050 + 17.5 0.000 promoter-TSS (NM_024694) promoter-TSS (NM_024694) 3 NR_125860 101928661 Hs.711833 NR_125860 ENSG00000237468 LOC101928661 - uncharacterized LOC101928661 ncRNA chr7-1168 chr7 372017 372261 + 17.5 0.000 Intergenic Intergenic -7286 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr4-1042 chr4 107853545 107853789 + 17.5 0.000 intron (NM_001136258, intron 1 of 6) L2c|LINE|L2 29102 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr1-1150 chr1 32246981 32247225 + 17.5 0.000 promoter-TSS (NM_032648) promoter-TSS (NM_032648) -119 NM_032648 84734 Hs.18449 NM_032648 ENSG00000183615 FAM167B C1orf90|DIORA-2 family with sequence similarity 167 member B protein-coding chr11-932 chr11 76836442 76836686 + 17.5 0.000 Intergenic Intergenic -24354 NM_018367 55331 Hs.23862 NM_018367 ENSG00000078124 ACER3 APHC|PHCA|PLDECO alkaline ceramidase 3 protein-coding chr11-880 chr11 45771867 45772111 + 17.5 0.000 intron (NR_027134, intron 1 of 1) L2a|LINE|L2 557 NR_027134 374387 Hs.632142 NM_199137 ENSG00000205106 LINC02716 DKFZp779M0652 long intergenic non-protein coding RNA 2716 ncRNA chr2-1737 chr2 74842669 74842913 + 17.5 0.000 intron (NM_000189, intron 1 of 17) intron (NM_000189, intron 1 of 17) 10136 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr9-970 chr9 126631561 126631805 + 17.5 0.000 intron (NM_001174146, intron 2 of 7) intron (NM_001174146, intron 2 of 7) 17240 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr2-1702 chr2 54065516 54065760 + 17.5 0.000 intron (NM_001320587, intron 3 of 5) intron (NM_001320587, intron 3 of 5) -49977 NM_138448 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr3-539 chr3 149129502 149129746 + 17.5 0.000 promoter-TSS (NM_032383) promoter-TSS (NM_032383) -14 NM_032383 84343 Hs.558314 NM_032383 ENSG00000163755 HPS3 BLOC2S1|SUTAL HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 protein-coding chr13-259 chr13 99498589 99498833 + 17.5 0.000 non-coding (NR_110731, exon 1 of 5) non-coding (NR_110731, exon 1 of 5) 595 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr17-971 chr17 42543217 42543461 + 17.5 0.000 exon (NM_000263, exon 6 of 6) exon (NM_000263, exon 6 of 6) 7098 NM_000263 4669 Hs.50727 NM_000263 ENSG00000108784 NAGLU CMT2V|MPS-IIIB|MPS3B|NAG|UFHSD N-acetyl-alpha-glucosaminidase protein-coding chr2-1863 chr2 168515585 168515829 + 17.5 0.000 intron (NM_001256126, intron 1 of 10) intron (NM_001256126, intron 1 of 10) 59435 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding chr8-608 chr8 25203265 25203509 + 17.5 0.000 intron (NM_024940, intron 1 of 51) intron (NM_024940, intron 1 of 51) 18698 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr7-1100 chr7 47270429 47270673 + 17.5 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR 194252 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr11-769 chr11 120234070 120234314 + 17.5 0.000 Intergenic Intergenic -2446 NM_001244682 25833 Hs.227115 NM_014352 ENSG00000137709 POU2F3 Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a POU class 2 homeobox 3 protein-coding chr12-754 chr12 60257206 60257450 + 17.5 0.000 Intergenic Intergenic 567958 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr14-795 chr14 103361793 103362037 + 17.5 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -23449 NM_001128921 4140 Hs.35828 NM_002376 ENSG00000075413 MARK3 CTAK1|KP78|PAR1A|Par-1a|VIPB microtubule affinity regulating kinase 3 protein-coding chr1-1262 chr1 8423292 8423536 + 17.5 0.000 intron (NM_001042681, intron 11 of 22) CpG 418 NM_001042682 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding chr1-1486 chr1 11671813 11672057 + 17.5 0.000 exon (NM_018438, exon 4 of 6) exon (NM_018438, exon 4 of 6) 7735 NM_018438 26270 Hs.464419 NM_018438 ENSG00000116663 FBXO6 FBG2|FBS2|FBX6|Fbx6b F-box protein 6 protein-coding chr16-424 chr16 29751076 29751320 + 17.5 0.000 Intergenic AluSx|SINE|Alu -5208 NM_175900 283897 Hs.331095 NM_175900 ENSG00000185905 C16orf54 - chromosome 16 open reading frame 54 protein-coding chr4-344 chr4 127881342 127881586 + 17.5 0.000 intron (NM_001190801, intron 1 of 15) CpG 220 NM_001190801 10733 Hs.172052 NM_014264 ENSG00000142731 PLK4 MCCRP2|SAK|STK18 polo like kinase 4 protein-coding chr22-473 chr22 24137868 24138112 + 17.5 0.000 intron (NM_012295, intron 29 of 36) intron (NM_012295, intron 29 of 36) -43497 NM_019601 56241 Hs.131819 NM_019601 ENSG00000099994 SUSD2 BK65A6.2|W5C5 sushi domain containing 2 protein-coding chr19-918 chr19 3555940 3556184 + 17.5 0.000 intron (NM_001287529, intron 1 of 9) intron (NM_001287529, intron 1 of 9) 1522 NM_001287529 126321 Hs.656901 NM_021731 ENSG00000161091 MFSD12 C19orf28|PP3501 major facilitator superfamily domain containing 12 protein-coding chr16-999 chr16 269340 269584 + 17.5 0.000 intron (NM_001286485, intron 15 of 15) (CCACAGG)n|Simple_repeat|Simple_repeat 6482 NM_183337 8786 Hs.65756 NM_003834 ENSG00000076344 RGS11 RS11 regulator of G protein signaling 11 protein-coding chr9-861 chr9 20981319 20981563 + 17.5 0.000 exon (NM_017794, exon 40 of 46) exon (NM_017794, exon 40 of 46) 50199 NM_001321903 401494 Hs.716678 NM_001010915 ENSG00000188921 HACD4 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 protein-coding chr4-553 chr4 141375976 141376220 + 17.5 0.000 Intergenic L1PA16|LINE|L1 -43481 NR_121625 100507639 Hs.535010 NR_121625 LINC02432 - long intergenic non-protein coding RNA 2432 ncRNA chr9-1161 chr9 2879430 2879674 + 17.5 0.000 Intergenic MLT1I|LTR|ERVL-MaLR -35457 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr16-891 chr16 88701972 88702216 + 17.5 0.000 intron (NM_178841, intron 1 of 5) intron (NM_178841, intron 1 of 5) 1487 NM_001171816 115992 Hs.513804 NM_178841 ENSG00000158717 RNF166 - ring finger protein 166 protein-coding chr17-429 chr17 81345567 81345811 + 17.5 0.000 Intergenic CpG -36441 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr1-1933 chr1 226047681 226047925 + 17.5 0.000 Intergenic Intergenic -14913 NM_002107 3020 Hs.533624 NM_002107 ENSG00000163041 H3F3A H3.3A|H3F3 H3 histone family member 3A protein-coding chr17-1427 chr17 78488150 78488394 + 17.5 0.000 intron (NM_173628, intron 44 of 80) intron (NM_173628, intron 44 of 80) 3362 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr1-2660 chr1 227344011 227344255 + 17.5 0.000 Intergenic Intergenic -25641 NM_003607 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding chr18-258 chr18 79507125 79507369 + 17.5 0.000 intron (NM_001278673, intron 8 of 8) intron (NM_001278673, intron 8 of 8) -72035 NR_148949 284240 Hs.448912 NR_148949 LOC284240 - uncharacterized LOC284240 ncRNA chr4-237 chr4 42465965 42466209 + 17.5 0.000 intron (NM_001105529, intron 24 of 35) intron (NM_001105529, intron 24 of 35) 68599 NM_001080505 152573 Hs.370904 NM_001080505 ENSG00000178343 SHISA3 hShisa3 shisa family member 3 protein-coding chr4-828 chr4 88005351 88005595 + 17.5 0.000 Intergenic Intergenic -2162 NR_156488 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr16-934 chr16 24669551 24669795 + 17.5 0.000 intron (NR_122072, intron 1 of 2) intron (NR_122072, intron 1 of 2) 1389 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA chr2-1391 chr2 230861755 230861999 + 17.5 0.000 Intergenic Intergenic -2308 NM_001287241 81618 Hs.111577 NM_030926 ENSG00000135916 ITM2C BRI3|BRICD2C|E25|E25C|ITM3 integral membrane protein 2C protein-coding chr2-1394 chr2 231297149 231297393 + 17.5 0.000 intron (NM_001352759, intron 19 of 19) intron (NM_001352759, intron 19 of 19) -65437 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr3-450 chr3 112685547 112685791 + 17.5 0.000 Intergenic Intergenic -44526 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr15-592 chr15 77584428 77584672 + 17.5 0.000 Intergenic LTR16C|LTR|ERVL 48362 NM_032808 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr11-1569 chr11 70164109 70164353 + 17.5 0.000 intron (NM_018043, intron 19 of 25) intron (NM_018043, intron 19 of 25) -38932 NM_003824 8772 Hs.86131 NM_003824 ENSG00000168040 FADD GIG3|MORT1 Fas associated via death domain protein-coding chr6-910 chr6 12491018 12491262 + 17.5 0.000 Intergenic Intergenic 94264 NR_149140 101928309 Hs.639414 NR_149140 ENSG00000234015 LINC02530 - long intergenic non-protein coding RNA 2530 ncRNA chr1-1289 chr1 19799662 19799906 + 17.5 0.000 promoter-TSS (NM_001349115) promoter-TSS (NM_001349115) 132 NM_001349113 255104 Hs.466729 NM_181719 ENSG00000162542 TMCO4 - transmembrane and coiled-coil domains 4 protein-coding chr4-923 chr4 10115433 10115677 + 17.5 0.000 intron (NM_017491, intron 2 of 14) MIRc|SINE|MIR 1244 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding chr11-484 chr11 123430006 123430250 + 17.5 0.000 promoter-TSS (NM_001354837) promoter-TSS (NM_001354837) -141 NM_001354837 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr9-659 chr9 76459124 76459368 + 17.5 0.000 promoter-TSS (NM_001490) promoter-TSS (NM_001490) 64 NM_001490 2650 Hs.521568 NM_001490 ENSG00000187210 GCNT1 C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 glucosaminyl (N-acetyl) transferase 1 protein-coding chr1-1857 chr1 162136869 162137113 + 17.5 0.000 intron (NM_014697, intron 1 of 9) intron (NM_014697, intron 1 of 9) -20116 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA chr5-767 chr5 89396325 89396569 + 17.5 0.000 intron (NR_136221, intron 5 of 6) intron (NR_136221, intron 5 of 6) -492342 NM_001131005 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding chr10-873 chr10 82211512 82211756 + 17.5 0.000 intron (NM_001165973, intron 2 of 10) intron (NM_001165973, intron 2 of 10) 21286 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr11-954 chr11 119432598 119432842 + 17.5 0.000 intron (NR_034160, intron 2 of 3) intron (NR_034160, intron 2 of 3) -7735 NM_001311162 7070 Hs.644697 NM_006288 ENSG00000154096 THY1 CD90|CDw90 Thy-1 cell surface antigen protein-coding chr16-358 chr16 3046708 3046952 + 17.5 0.000 5' UTR (NM_022468, exon 1 of 10) 5' UTR (NM_022468, exon 1 of 10) 269 NM_022468 64386 Hs.654979 NM_004142 ENSG00000008516 MMP25 MMP-25|MMP20|MMP20A|MMPL1|MT-MMP 6|MT-MMP6|MT6-MMP|MT6MMP|MTMMP6 matrix metallopeptidase 25 protein-coding chr9-819 chr9 131405701 131405945 + 17.5 0.000 Intergenic Intergenic -24267 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr16-825 chr16 57478757 57479001 + 17.5 0.000 intron (NM_001369618, intron 2 of 7) intron (NM_001369618, intron 2 of 7) 878 NM_001369621 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr11-481 chr11 118621336 118621580 + 17.5 0.000 intron (NM_015157, intron 5 of 23) CpG 13843 NM_001144759 23187 Hs.504062 NM_015157 ENSG00000019144 PHLDB1 LL5A pleckstrin homology like domain family B member 1 protein-coding chr15-646 chr15 52068206 52068450 + 17.5 0.000 TTS (NM_002748) TTS (NM_002748) 44447 NM_020396 10017 Hs.283672 NM_020396 ENSG00000137875 BCL2L10 BCL-B|Boo|Diva|bcl2-L-10 BCL2 like 10 protein-coding chr1-2691 chr1 246107630 246107874 + 17.5 0.000 intron (NM_022743, intron 5 of 11) intron (NM_022743, intron 5 of 11) 309660 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr15-376 chr15 59296270 59296514 + 17.5 0.000 intron (NM_004998, intron 1 of 27) intron (NM_004998, intron 1 of 27) 76479 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr19-1569 chr19 31110468 31110712 + 17.5 0.000 Intergenic Intergenic -56920 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr1-2395 chr1 56948088 56948332 + 17.4 0.000 intron (NM_000066, intron 6 of 11) intron (NM_000066, intron 6 of 11) 17805 NM_000066 732 Hs.391835 NM_000066 ENSG00000021852 C8B C82 complement C8 beta chain protein-coding chr19-983 chr19 37655393 37655637 + 17.4 0.000 promoter-TSS (NM_001320671) promoter-TSS (NM_001320671) -50 NM_001320671 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding chr2-685 chr2 109470496 109470740 + 17.4 0.000 intron (NM_001099289, intron 8 of 9) intron (NM_001099289, intron 8 of 9) 143049 NM_001321513 151011 Hs.469615 NM_144710 ENSG00000186522 SEPTIN10 SEPT10 septin 10 protein-coding chr13-217 chr13 94305484 94305728 + 17.4 0.000 intron (NM_005708, intron 5 of 8) Tigger17a|DNA|TcMar-Tigger -117615 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr9-428 chr9 95875990 95876234 + 17.4 0.000 promoter-TSS (NR_023390) promoter-TSS (NR_023390) 104 NM_001010895 375748 Hs.432364 NM_020207 ENSG00000182150 ERCC6L2 BMFS2|C9orf102|RAD26L|SR278 ERCC excision repair 6 like 2 protein-coding chr7-861 chr7 137668161 137668405 + 17.4 0.000 intron (NM_001321710, intron 3 of 32) intron (NM_001321710, intron 3 of 32) 178049 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding KI270442.1-3 KI270442.1 217958 218202 + 17.4 0.000 NA NA NA NA chr4-710 chr4 84870641 84870885 + 17.4 0.000 intron (NM_014991, intron 3 of 67) L1MCa|LINE|L1 -94853 NR_152772 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr1-2109 chr1 204417487 204417731 + 17.4 0.000 Intergenic L2c|LINE|L2 -5792 NM_032833 84919 Hs.304376 NM_032833 ENSG00000158615 PPP1R15B CREP|MSSGM2 protein phosphatase 1 regulatory subunit 15B protein-coding chr10-1290 chr10 118117116 118117360 + 17.4 0.000 intron (NR_026940, intron 3 of 3) UCON1|Unknown|Unknown -70297 NM_014904 22841 Hs.173656 NM_014904 ENSG00000107560 RAB11FIP2 Rab11-FIP2|nRip11 RAB11 family interacting protein 2 protein-coding chr2-1582 chr2 240162427 240162671 + 17.4 0.000 Intergenic L1MC5a|LINE|L1 -21891 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding chr11-1457 chr11 36470016 36470260 + 17.4 0.000 Intergenic Intergenic 40134 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr17-1086 chr17 82597411 82597655 + 17.4 0.000 intron (NM_004514, intron 8 of 8) intron (NM_004514, intron 8 of 8) 50911 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr1-1311 chr1 32447855 32448099 + 17.4 0.000 Intergenic HERVIP10FH-int|LTR|ERV1 -17095 NM_001145720 728116 Hs.647658 NM_001145720 ENSG00000273274 ZBTB8B ZNF916B zinc finger and BTB domain containing 8B protein-coding chr20-297 chr20 36493705 36493949 + 17.4 0.000 intron (NM_183006, intron 1 of 6) MIRb|SINE|MIR 32032 NM_183006 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr5-944 chr5 160855288 160855532 + 17.4 0.000 Intergenic L1MDa|LINE|L1 -3199 NM_025153 23120 Hs.109358 NM_025153 ENSG00000118322 ATP10B ATPVB ATPase phospholipid transporting 10B (putative) protein-coding chr11-1272 chr11 35260633 35260877 + 17.4 0.000 3' UTR (NM_004171, exon 11 of 11) 3' UTR (NM_004171, exon 11 of 11) 97805 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr1-1557 chr1 156147941 156148185 + 17.4 0.000 Intergenic Intergenic -1881 NM_001370569 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr2-1888 chr2 190636429 190636673 + 17.4 0.000 Intergenic MamSINE1|SINE|tRNA-RTE -12344 NM_001321313 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding chr17-1225 chr17 4739516 4739760 + 17.4 0.000 promoter-TSS (NM_001267822) promoter-TSS (NM_001267822) -195 NM_001136046 84225 Hs.47223 NM_032265 ENSG00000141497 ZMYND15 SPGF14 zinc finger MYND-type containing 15 protein-coding chr11-1618 chr11 93741431 93741675 + 17.4 0.000 promoter-TSS (NM_001351989) promoter-TSS (NM_001351989) -16 NR_146091 79101 Hs.355750 NM_024116 ENSG00000166012 TAF1D JOSD3|RAFI41|TAF(I)41|TAFI41 TATA-box binding protein associated factor, RNA polymerase I subunit D protein-coding chr5-747 chr5 56480779 56481023 + 17.4 0.000 intron (NR_104664, intron 1 of 4) CpG 868 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA chr1-1640 chr1 6330221 6330465 + 17.4 0.000 intron (NM_181866, intron 4 of 8) intron (NM_181866, intron 4 of 8) 28586 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr1-807 chr1 3747201 3747445 + 17.4 0.000 promoter-TSS (NR_033710) promoter-TSS (NR_033710) 50 NR_033710 57212 Hs.49658 NM_207306 ENSG00000227372 TP73-AS1 KIAA0495|PDAM TP73 antisense RNA 1 ncRNA chr18-113 chr18 46226660 46226904 + 17.4 0.000 intron (NM_001008239, intron 2 of 3) intron (NM_001008239, intron 2 of 3) 52748 NM_145055 147339 Hs.116486 NM_145055 ENSG00000152242 C18orf25 ARKL1|Ark2N|RNF111L1 chromosome 18 open reading frame 25 protein-coding chr2-1220 chr2 37283210 37283454 + 17.4 0.000 intron (NM_005813, intron 5 of 17) intron (NM_005813, intron 5 of 17) 33752 NM_005813 23683 Hs.660757 NM_005813 ENSG00000115825 PRKD3 EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU protein kinase D3 protein-coding chr1-1792 chr1 89994791 89995035 + 17.4 0.000 promoter-TSS (NR_002830) promoter-TSS (NR_002830) 53 NR_002830 492303 Hs.550796 NR_002830 GEMIN8P4 - gem nuclear organelle associated protein 8 pseudogene 4 pseudo chr7-1294 chr7 47591833 47592077 + 17.4 0.000 Intergenic Intergenic -9844 NM_022748 64759 Hs.520814 NM_022748 ENSG00000136205 TNS3 TEM6|TENS1 tensin 3 protein-coding chr11-322 chr11 117144579 117144823 + 17.4 0.000 intron (NR_110282, intron 1 of 2) CpG 414 NM_001309431 5049 Hs.728488 NM_002572 ENSG00000168092 PAFAH1B2 HEL-S-303 platelet activating factor acetylhydrolase 1b catalytic subunit 2 protein-coding chr19-788 chr19 6516865 6517109 + 17.4 0.000 Intergenic CpG -14039 NM_003811 8744 Hs.1524 NM_003811 ENSG00000125657 TNFSF9 4-1BB-L|CD137L|TNLG5A TNF superfamily member 9 protein-coding chr20-551 chr20 21436299 21436543 + 17.4 0.000 Intergenic Intergenic -38895 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr13-517 chr13 99753037 99753281 + 17.4 0.000 intron (NR_120421, intron 4 of 4) L2a|LINE|L2 -24158 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr10-901 chr10 100563053 100563297 + 17.4 0.000 Intergenic Intergenic 27232 NM_017902 55662 Hs.500788 NM_017902 ENSG00000166135 HIF1AN FIH1 hypoxia inducible factor 1 subunit alpha inhibitor protein-coding chr10-497 chr10 11552269 11552513 + 17.4 0.000 intron (NM_014688, intron 2 of 14) intron (NM_014688, intron 2 of 14) -20111 NM_001080491 9712 Hs.498661 NM_014688 ENSG00000148429 USP6NL RNTRE|TRE2NL|USP6NL-IT1 USP6 N-terminal like protein-coding chr8-813 chr8 20382176 20382420 + 17.4 0.000 Intergenic Intergenic -78335 NM_021020 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr3-774 chr3 134311446 134311690 + 17.4 0.000 Intergenic AluJb|SINE|Alu -2008 NR_146711 105374119 NR_146711 ENSG00000240006 LINC02004 - long intergenic non-protein coding RNA 2004 ncRNA chr8-1013 chr8 144502658 144502902 + 17.4 0.000 TTS (NM_001329445) TTS (NM_001329445) -1360 NM_005309 2875 Hs.103502 NM_005309 ENSG00000167701 GPT AAT1|ALT1|GPT1 glutamic--pyruvic transaminase protein-coding chr7-1423 chr7 135909184 135909428 + 17.4 0.000 Intergenic HAL1|LINE|L1 68053 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding chr13-357 chr13 99392597 99392841 + 17.4 0.000 Intergenic Intergenic 36588 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr20-226 chr20 18587823 18588067 + 17.4 0.000 promoter-TSS (NM_001318043) promoter-TSS (NM_001318043) -109 NM_001318043 92675 Hs.659442 NM_080820 ENSG00000125821 DTD1 C20orf88|DTD|DUE-B|DUEB|HARS2|pqn-68 D-aminoacyl-tRNA deacylase 1 protein-coding chr17-1342 chr17 55455044 55455288 + 17.4 0.000 Intergenic Intergenic -33331 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr7-1440 chr7 149496344 149496588 + 17.4 0.000 intron (NM_152557, intron 1 of 6) intron (NM_152557, intron 1 of 6) 1341 NM_001163474 155061 Hs.24643 NM_152557 ENSG00000181220 ZNF746 PARIS zinc finger protein 746 protein-coding chr2-1016 chr2 200306880 200307124 + 17.4 0.000 intron (NM_001100423, intron 1 of 12) CpG 309 NM_001100423 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr16-1089 chr16 29029188 29029432 + 17.4 0.000 Intergenic Intergenic 44258 NM_014387 27040 Hs.632179 NM_014387 ENSG00000213658 LAT IMD52|LAT1|pp36 linker for activation of T cells protein-coding chr17-682 chr17 16973524 16973768 + 17.4 0.000 Intergenic L1ME3G|LINE|L1 -1558 NM_012452 23495 Hs.158341 NM_012452 ENSG00000240505 TNFRSF13B CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B TNF receptor superfamily member 13B protein-coding chr10-1340 chr10 132422054 132422298 + 17.4 0.000 Intergenic Intergenic -23013 NR_149317 170393 Hs.375059 NR_149317 C10orf91 - chromosome 10 open reading frame 91 (putative) ncRNA chr15-633 chr15 42890564 42890808 + 17.4 0.000 intron (NM_173500, intron 1 of 14) MER21C|LTR|ERVL 30092 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr3-1004 chr3 122383153 122383397 + 17.4 0.000 promoter-TSS (NM_014367) promoter-TSS (NM_014367) -44 NM_001308326 131076 Hs.220594 NM_001017928 ENSG00000160124 CCDC58 - coiled-coil domain containing 58 protein-coding chr7-301 chr7 141551296 141551540 + 17.4 0.000 promoter-TSS (NM_001364948) promoter-TSS (NM_001364948) 8 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr2-1700 chr2 53624791 53625035 + 17.4 0.000 Intergenic Intergenic -142870 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding chr12-435 chr12 104286514 104286758 + 17.4 0.000 promoter-TSS (NM_001261446) promoter-TSS (NM_001261446) -396 NM_182743 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr10-618 chr10 13376275 13376519 + 17.4 0.000 Intergenic Intergenic -28099 NM_001195602 22929 Hs.124027 NM_012247 ENSG00000086475 SEPHS1 SELD|SPS|SPS1 selenophosphate synthetase 1 protein-coding chr6-1096 chr6 152095152 152095396 + 17.4 0.000 intron (NM_001122741, intron 8 of 8) intron (NM_001122741, intron 8 of 8) 73013 NM_001347702 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr5-627 chr5 150700903 150701147 + 17.4 0.000 promoter-TSS (NM_018047) promoter-TSS (NM_018047) 37 NM_018047 55696 Hs.713564 NM_018047 ENSG00000086589 RBM22 Cwc2|ZC3H16|fSAP47 RNA binding motif protein 22 protein-coding chr7-583 chr7 99558325 99558569 + 17.4 0.000 promoter-TSS (NM_138494) promoter-TSS (NM_138494) 25 NM_001085366 79027 Hs.599798 NM_024061 ENSG00000197343 ZNF655 VIK|VIK-1 zinc finger protein 655 protein-coding chr12-596 chr12 118135781 118136025 + 17.4 0.000 promoter-TSS (NM_002567) promoter-TSS (NM_002567) -221 NM_002567 5037 Hs.433863 NM_002567 ENSG00000089220 PEBP1 HCNP|HCNPpp|HEL-210|HEL-S-34|HEL-S-96|PBP|PEBP|PEBP-1|RKIP phosphatidylethanolamine binding protein 1 protein-coding chr3-1258 chr3 43854461 43854705 + 17.4 0.000 Intergenic L2a|LINE|L2 -162989 NM_001346469 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding chr13-399 chr13 92029299 92029543 + 17.4 0.000 intron (NM_004466, intron 6 of 7) intron (NM_004466, intron 6 of 7) 322786 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA chr3-1276 chr3 48674051 48674295 + 17.4 0.000 3' UTR (NM_184231, exon 13 of 13) 3' UTR (NM_184231, exon 13 of 13) 10405 NR_111921 102724368 Hs.663571 NR_111921 ENSG00000228350 LINC02585 CELSR3-AS1 long intergenic non-protein coding RNA 2585 ncRNA chr2-1060 chr2 1737114 1737358 + 17.4 0.000 intron (NM_012293, intron 1 of 22) intron (NM_012293, intron 1 of 22) 7279 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr19-593 chr19 18939840 18940084 + 17.4 0.000 promoter-TSS (NM_001145724) promoter-TSS (NM_001145724) -292 NR_134913 102724360 Hs.559299 NR_134912 ENSG00000269019 HOMER3-AS1 - HOMER3 antisense RNA 1 ncRNA chrX-333 chrX 132489096 132489340 + 17.4 0.000 intron (NM_001170704, intron 1 of 8) CpG 817 NM_001170704 55796 Hs.105134 NM_018388 ENSG00000076770 MBNL3 CHCR|MBLX|MBLX39|MBXL muscleblind like splicing regulator 3 protein-coding chr15-388 chr15 70449957 70450201 + 17.4 0.000 Intergenic Intergenic 55849 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr1-1538 chr1 112522715 112522959 + 17.4 0.000 TTS (NM_138727) TTS (NM_138727) 13872 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding chr9-439 chr9 124779396 124779640 + 17.4 0.000 intron (NM_182487, intron 1 of 7) intron (NM_182487, intron 1 of 7) 2385 NM_182487 169611 Hs.357004 NM_182487 ENSG00000185585 OLFML2A PRO34319 olfactomedin like 2A protein-coding chr19-955 chr19 16180705 16180949 + 17.4 0.000 Intergenic Kanga1b|DNA|TcMar-Tc2 -4583 NM_014077 26017 Hs.631614 NM_014077 ENSG00000105058 FAM32A OTAG-12|OTAG12 family with sequence similarity 32 member A protein-coding chr1-1490 chr1 16023724 16023968 + 17.4 0.000 exon (NM_001042704, exon 3 of 20) exon (NM_001042704, exon 3 of 20) 1810 NM_001257139 1187 Hs.591533 NM_004070 ENSG00000186510 CLCNKA CLCK1|ClC-K1|hClC-Ka chloride voltage-gated channel Ka protein-coding chr5-957 chr5 177233213 177233457 + 17.4 0.000 intron (NM_172349, intron 6 of 23) AluJb|SINE|Alu 70384 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr11-1058 chr11 5589969 5590213 + 17.4 0.000 Intergenic LTR12C|LTR|ERV1 -6020 NM_058166 117854 Hs.729048 NM_058166 ENSG00000121236 TRIM6 RNF89 tripartite motif containing 6 protein-coding chr4-408 chr4 47914470 47914714 + 17.4 0.000 promoter-TSS (NM_001278624) promoter-TSS (NM_001278624) -9 NM_001278624 152518 Hs.646325 NM_152995 ENSG00000170448 NFXL1 CDZFP|HOZFP|OZFP|URCC5 nuclear transcription factor, X-box binding like 1 protein-coding chr12-701 chr12 122189597 122189841 + 17.4 0.000 intron (NM_152759, intron 4 of 11) (TCCTG)n|Simple_repeat|Simple_repeat 6596 NM_001098519 254050 Hs.374856 NM_152759 ENSG00000158113 LRRC43 - leucine rich repeat containing 43 protein-coding chr9-661 chr9 83538077 83538321 + 17.4 0.000 exon (NM_001244959, exon 1 of 15) exon (NM_001244959, exon 1 of 15) 202 NM_174938 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding chr3-669 chr3 128823579 128823823 + 17.4 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -23107 NR_162138 113219457 NR_162138 MIR12124 - microRNA 12124 ncRNA chr9-481 chr9 97033880 97034124 + 17.4 0.000 intron (NM_001201575, intron 7 of 7) AluSx3|SINE|Alu 5140 NM_001333 1515 Hs.610096 NM_001333 ENSG00000136943 CTSV CATL2|CTSL2|CTSU cathepsin V protein-coding chr20-217 chr20 62183061 62183305 + 17.4 0.000 TTS (NR_125981) TTS (NR_125981) 158 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chr7-1223 chr7 11818808 11819052 + 17.4 0.000 intron (NM_015204, intron 1 of 26) LTR101_Mam|LTR|ERVL 13268 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr10-926 chr10 119253392 119253636 + 17.4 0.000 intron (NM_005308, intron 1 of 15) intron (NM_005308, intron 1 of 15) 45943 NM_005308 2869 Hs.524625 NM_005308 ENSG00000198873 GRK5 FP2025|GPRK5 G protein-coupled receptor kinase 5 protein-coding chr6-397 chr6 43454630 43454874 + 17.4 0.000 exon (NM_206539, exon 2 of 6) exon (NM_206539, exon 2 of 6) 796 NM_023932 65989 Hs.337251 NM_023932 ENSG00000171462 DLK2 DLK-2|EGFL9 delta like non-canonical Notch ligand 2 protein-coding chr19-1010 chr19 48837049 48837293 + 17.4 0.000 promoter-TSS (NM_016246) promoter-TSS (NM_016246) -680 NM_016246 51171 Hs.18788 NM_016246 ENSG00000087076 HSD17B14 DHRS10|SDR47C1|retSDR3 hydroxysteroid 17-beta dehydrogenase 14 protein-coding chr3-474 chr3 48662910 48663154 + 17.4 0.000 promoter-TSS (NM_001407) promoter-TSS (NM_001407) -146 NM_001407 1951 Hs.631926 NM_001407 ENSG00000008300 CELSR3 ADGRC3|CDHF11|EGFL1|FMI1|HFMI1|MEGF2|RESDA1 cadherin EGF LAG seven-pass G-type receptor 3 protein-coding chr2-1270 chr2 85277799 85278043 + 17.4 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) 50068 NM_006464 10618 Hs.593382 NM_006464 ENSG00000152291 TGOLN2 TGN38|TGN46|TGN48|TGN51|TTGN2 trans-golgi network protein 2 protein-coding chr1-1024 chr1 43671810 43672054 + 17.4 0.000 intron (NM_014663, intron 11 of 21) intron (NM_014663, intron 11 of 21) 21783 NM_014663 9682 Hs.155983 NM_014663 ENSG00000066135 KDM4A JHDM3A|JMJD2|JMJD2A|TDRD14A lysine demethylase 4A protein-coding chr2-1083 chr2 46967265 46967509 + 17.4 0.000 intron (NM_001288951, intron 3 of 20) L1MB2|LINE|L1 -25532 NM_001171508 90411 Hs.662152 NM_139279 ENSG00000180398 MCFD2 F5F8D|F5F8D2|LMAN1IP|SDNSF multiple coagulation factor deficiency 2 protein-coding chr11-1456 chr11 36289443 36289687 + 17.4 0.000 promoter-TSS (NM_014186) promoter-TSS (NM_014186) -141 NM_014186 29099 Hs.99443 NM_014186 ENSG00000110442 COMMD9 C11orf55|HSPC166|LINC00610 COMM domain containing 9 protein-coding chr2-1923 chr2 215843717 215843961 + 17.4 0.000 promoter-TSS (NR_037195) promoter-TSS (NR_037195) -303 NR_037195 646324 Hs.655713 NR_037195 ENSG00000235770 LINC00607 - long intergenic non-protein coding RNA 607 ncRNA chr8-570 chr8 93961209 93961453 + 17.4 0.000 Intergenic Intergenic 44384 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding chr13-422 chr13 19781983 19782227 + 17.4 0.000 intron (NM_001042414, intron 2 of 9) CpG 840 NR_003272 55269 Hs.213198 NM_001042414 ENSG00000121390 PSPC1 PSP1 paraspeckle component 1 protein-coding chr5-743 chr5 53482940 53483184 + 17.4 0.000 exon (NM_006350, exon 2 of 6) exon (NM_006350, exon 2 of 6) 2433 NM_013409 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr11-1144 chr11 65662183 65662427 + 17.4 0.000 intron (NM_001243984, intron 1 of 10) intron (NM_001243984, intron 1 of 10) 611 NM_001243984 5970 Hs.502875 NM_021975 ENSG00000173039 RELA CMCU|NFKB3|p65 RELA proto-oncogene, NF-kB subunit protein-coding chr7-1184 chr7 1648583 1648827 + 17.4 0.000 Intergenic MLT1B|LTR|ERVL-MaLR 34235 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr5-1129 chr5 139513857 139514101 + 17.4 0.000 Intergenic Intergenic -31221 NM_198282 340061 Hs.379754 NM_198282 ENSG00000184584 TMEM173 ERIS|MITA|MPYS|NET23|SAVI|STING|STING-beta|hMITA|hSTING transmembrane protein 173 protein-coding chr13-482 chr13 63435625 63435869 + 17.4 0.000 Intergenic LTR8B|LTR|ERV1 -107653 NR_126409 104355293 Hs.121439 NR_126409 ENSG00000227564 LINC00376 - long intergenic non-protein coding RNA 376 ncRNA chr11-776 chr11 132632809 132633053 + 17.4 0.000 intron (NM_002545, intron 2 of 6) intron (NM_002545, intron 2 of 6) 310706 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr2-1617 chr2 18899771 18900015 + 17.4 0.000 Intergenic Intergenic 127078 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr17-752 chr17 19977951 19978195 + 17.4 0.000 promoter-TSS (NM_001330152) promoter-TSS (NM_001330152) -217 NM_001330152 11216 Hs.642676 NM_007202 ENSG00000108599 AKAP10 AKAP-10|D-AKAP-2|D-AKAP2|PRKA10 A-kinase anchoring protein 10 protein-coding chr4-592 chr4 38318914 38319158 + 17.4 0.000 Intergenic Intergenic -47878 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA chr11-1239 chr11 131867788 131868032 + 17.4 0.000 intron (NM_001352006, intron 2 of 9) intron (NM_001352006, intron 2 of 9) -42014 NR_147850 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr19-1155 chr19 2444629 2444873 + 17.4 0.000 intron (NM_032737, intron 1 of 11) intron (NM_032737, intron 1 of 11) -9751 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr1-2507 chr1 151988441 151988685 + 17.4 0.000 intron (NM_002966, intron 1 of 2) intron (NM_002966, intron 1 of 2) 5296 NM_002966 6281 Hs.143873 NM_002966 ENSG00000197747 S100A10 42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10 S100 calcium binding protein A10 protein-coding chr12-580 chr12 57726081 57726325 + 17.4 0.000 promoter-TSS (NR_027032) promoter-TSS (NR_027032) -37 NR_027032 100130776 Hs.656080 NR_027032 ENSG00000255737 AGAP2-AS1 PUNISHER AGAP2 antisense RNA 1 ncRNA chr2-623 chr2 112645507 112645751 + 17.4 0.000 promoter-TSS (NM_005415) promoter-TSS (NM_005415) -310 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding chr8-782 chr8 125726843 125727087 + 17.2 0.000 Intergenic LTR79|LTR|ERVL 224232 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr1-1512 chr1 45361181 45361425 + 17.2 0.000 intron (NM_007170, intron 4 of 10) intron (NM_007170, intron 4 of 10) -20833 NM_001048171 4595 Hs.271353 NM_012222 ENSG00000132781 MUTYH MYH mutY DNA glycosylase protein-coding chr8-549 chr8 22694519 22694763 + 17.2 0.000 Intergenic CpG-27074 -1161 NM_004430 1960 Hs.534313 NM_004430 ENSG00000179388 EGR3 EGR-3|PILOT early growth response 3 protein-coding chr17-554 chr17 55421870 55422114 + 17.2 0.000 promoter-TSS (NM_012329) promoter-TSS (NM_012329) -157 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr6-619 chr6 110415024 110415268 + 17.2 0.000 intron (NM_004032, intron 1 of 3) intron (NM_004032, intron 1 of 3) 429 NM_001368172 8528 Hs.591348 NM_003649 ENSG00000203797 DDO DASOX|DDO-1|DDO-2 D-aspartate oxidase protein-coding chr6-474 chr6 161273931 161274175 + 17.2 0.000 promoter-TSS (NM_020133) promoter-TSS (NM_020133) 8 NM_020133 56895 Hs.353175 NM_020133 ENSG00000026652 AGPAT4 1-AGPAT4|LPAAT-delta|dJ473J16.2 1-acylglycerol-3-phosphate O-acyltransferase 4 protein-coding chr10-1230 chr10 93039867 93040111 + 17.2 0.000 intron (NM_001319195, intron 20 of 21) L2c|LINE|L2 -20809 NM_183374 340665 Hs.369993 NM_183374 ENSG00000187553 CYP26C1 FFDD4 cytochrome P450 family 26 subfamily C member 1 protein-coding chr6-401 chr6 70566807 70567051 + 17.2 0.000 promoter-TSS (NM_145267) promoter-TSS (NM_145267) -1 NM_145267 135154 Hs.418495 NM_145267 ENSG00000154079 SDHAF4 C6orf57|Sdh8 succinate dehydrogenase complex assembly factor 4 protein-coding chr8-976 chr8 138769453 138769697 + 17.2 0.000 intron (NM_152888, intron 16 of 64) intron (NM_152888, intron 16 of 64) 144466 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding chr10-966 chr10 938161 938405 + 17.2 0.000 intron (NR_120629, intron 1 of 2) AluY|SINE|Alu 5257 NR_120629 101927762 Hs.151159 NR_120629 ENSG00000229869 LOC101927762 - uncharacterized LOC101927762 ncRNA chr22-548 chr22 50209252 50209496 + 17.2 0.000 intron (NM_031454, intron 3 of 8) intron (NM_031454, intron 3 of 8) 8363 NM_031454 83642 Hs.365405 NM_031454 ENSG00000073169 SELENOO SELO selenoprotein O protein-coding chr11-1367 chr11 126113727 126113971 + 17.2 0.000 Intergenic Intergenic -50557 NM_001243597 50937 Hs.38034 NM_016952 ENSG00000064309 CDON CDO|CDON1|HPE11|ORCAM cell adhesion associated, oncogene regulated protein-coding chr16-1226 chr16 88441881 88442125 + 17.2 0.000 Intergenic Intergenic -11277 NM_153813 161882 Hs.632218 NM_153813 ENSG00000179588 ZFPM1 FOG|FOG1|ZC2HC11A|ZNF408|ZNF89A zinc finger protein, FOG family member 1 protein-coding chr2-959 chr2 86078841 86079085 + 17.2 0.000 intron (NM_015425, intron 9 of 33) intron (NM_015425, intron 9 of 33) 26923 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding chr11-920 chr11 68144807 68145051 + 17.2 0.000 Intergenic L2b|LINE|L2 -23538 NM_212469 1119 Hs.77221 NM_001277 ENSG00000110721 CHKA CHK|CK|CKI|EK choline kinase alpha protein-coding chr1-2496 chr1 149942354 149942598 + 17.2 0.000 3' UTR (NM_020205, exon 12 of 12) 3' UTR (NM_020205, exon 12 of 12) -5597 NM_001145862 10903 Hs.425144 NM_006697 ENSG00000014914 MTMR11 CRA myotubularin related protein 11 protein-coding chr17-726 chr17 82752575 82752819 + 17.2 0.000 intron (NM_005993, intron 1 of 38) CpG 632 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr2-1859 chr2 165588502 165588746 + 17.2 0.000 intron (NM_024969, intron 1 of 4) intron (NM_024969, intron 1 of 4) 16288 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr10-1137 chr10 35514834 35515078 + 17.2 0.000 intron (NM_001282854, intron 3 of 7) intron (NM_001282854, intron 3 of 7) -90385 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding chr12-787 chr12 131615808 131616052 + 17.2 0.000 Intergenic LTR49|LTR|ERV1 32191 NR_146868 105370085 Hs.739274 NR_146868 LINC02414 - long intergenic non-protein coding RNA 2414 ncRNA chr9-1348 chr9 129670073 129670317 + 17.2 0.000 intron (NM_016307, intron 1 of 3) L1MB3|LINE|L1 4548 NM_016307 51450 Hs.660115 NM_016307 ENSG00000167157 PRRX2 PMX2|PRX2 paired related homeobox 2 protein-coding chr11-950 chr11 111735645 111735889 + 17.2 0.000 intron (NM_181699, intron 15 of 15) intron (NM_181699, intron 15 of 15) 30622 NM_181700 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr19-1508 chr19 10920282 10920526 + 17.2 0.000 intron (NM_001370089, intron 10 of 14) intron (NM_001370089, intron 10 of 14) 8235 NM_001321439 78992 Hs.164026 NM_024029 ENSG00000130733 YIPF2 FinGER2 Yip1 domain family member 2 protein-coding chr6-1001 chr6 61033208 61033452 + 17.2 0.000 Intergenic SATR1|Satellite|Satellite -540800 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding chr17-1366 chr17 60744448 60744692 + 17.2 0.000 intron (NM_001330413, intron 5 of 25) intron (NM_001330413, intron 5 of 25) 66719 NM_001099432 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr1-1772 chr1 67889950 67890194 + 17.2 0.000 intron (NR_040077, intron 1 of 9) L2|LINE|L2 -56605 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding chr7-868 chr7 149791617 149791861 + 17.2 0.000 intron (NR_163594, intron 33 of 102) intron (NR_163594, intron 33 of 102) 15697 NR_163594 23145 Hs.632022 NR_163594 ENSG00000197558 SSPO - SCO-spondin pseudo chr19-670 chr19 5137678 5137922 + 17.2 0.000 intron (NM_015015, intron 17 of 22) intron (NM_015015, intron 17 of 22) 168687 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr15-413 chr15 39580995 39581239 + 17.2 0.000 promoter-TSS (NM_003246) promoter-TSS (NM_003246) 38 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr4-396 chr4 8106730 8106974 + 17.2 0.000 intron (NM_001130084, intron 1 of 19) intron (NM_001130084, intron 1 of 19) -34864 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr1-2173 chr1 2184033 2184277 + 17.2 0.000 promoter-TSS (NR_146290) promoter-TSS (NR_146290) -280 NR_146290 100506504 Hs.742283 NR_146290 ENSG00000182873 PRKCZ-AS1 - PRKCZ antisense RNA 1 ncRNA chr17-1265 chr17 19448932 19449176 + 17.2 0.000 Intergenic LTR47B4|LTR|ERVL 37822 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr1-549 chr1 75724510 75724754 + 17.2 0.000 5' UTR (NM_001127328, exon 1 of 12) 5' UTR (NM_001127328, exon 1 of 12) 285 NM_000016 34 Hs.445040 NM_000016 ENSG00000117054 ACADM ACAD1|MCAD|MCADH acyl-CoA dehydrogenase medium chain protein-coding chr6-363 chr6 138795889 138796133 + 17.2 0.000 promoter-TSS (NM_001195037) promoter-TSS (NM_001195037) -100 NM_001195037 345930 Hs.660603 NM_001077706 ENSG00000203734 ECT2L ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5 epithelial cell transforming 2 like protein-coding chr16-840 chr16 66874502 66874746 + 17.2 0.000 Intergenic Intergenic -5891 NM_001329932 57546 Hs.632214 NM_020786 ENSG00000172840 PDP2 PDPC 2|PPM2B|PPM2C2 pyruvate dehyrogenase phosphatase catalytic subunit 2 protein-coding chr3-705 chr3 34012113 34012357 + 17.2 0.000 Intergenic Intergenic 213605 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding chr21-85 chr21 43718810 43719054 + 17.2 0.000 promoter-TSS (NM_003681) promoter-TSS (NM_003681) -197 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr5-418 chr5 91380899 91381143 + 17.2 0.000 promoter-TSS (NM_001329670) promoter-TSS (NM_001329670) 674 NR_027435 100129716 Hs.116364 NR_027435 ENSG00000281357 ARRDC3-AS1 - ARRDC3 antisense RNA 1 ncRNA chr9-766 chr9 15097074 15097318 + 17.2 0.000 Intergenic Intergenic 103869 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr19-1142 chr19 1396570 1396814 + 17.2 0.000 TTS (NM_000156) TTS (NM_000156) 4850 NM_000156 2593 Hs.81131 NM_000156 ENSG00000130005 GAMT CCDS2|HEL-S-20|PIG2|TP53I2 guanidinoacetate N-methyltransferase protein-coding chr1-1305 chr1 28669169 28669413 + 17.2 0.000 intron (NM_024482, intron 1 of 9) CpG 507 NM_001319674 10691 Hs.632373 NM_006582 ENSG00000162419 GMEB1 P96PIF|PIF96 glucocorticoid modulatory element binding protein 1 protein-coding chr12-1188 chr12 98699650 98699894 + 17.2 0.000 intron (NM_001160, intron 17 of 25) intron (NM_001160, intron 17 of 25) 54472 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr4-524 chr4 55546896 55547140 + 17.2 0.000 promoter-TSS (NM_004898) promoter-TSS (NM_004898) -109 NM_004898 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding chr16-339 chr16 57486532 57486776 + 17.2 0.000 promoter-TSS (NM_018110) promoter-TSS (NM_018110) -161 NM_018110 55715 Hs.279832 NM_018110 ENSG00000125170 DOK4 IRS-5|IRS5 docking protein 4 protein-coding chr19-1489 chr19 7731023 7731267 + 17.2 0.000 intron (NM_001244856, intron 3 of 8) CpG-13566 1026 NM_198492 339390 Hs.220649 NM_198492 ENSG00000182566 CLEC4G DTTR431|LP2698|LSECtin|UNQ431 C-type lectin domain family 4 member G protein-coding chr17-1053 chr17 78125441 78125685 + 17.2 0.000 intron (NM_001321185, intron 5 of 19) intron (NM_001321185, intron 5 of 19) 3231 NM_001127198 11322 Hs.632227 NM_007267 ENSG00000141524 TMC6 EV1|EVER1|EVIN1|LAK-4P transmembrane channel like 6 protein-coding chr2-1685 chr2 45748477 45748721 + 17.2 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 96924 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr15-631 chr15 42490567 42490811 + 17.2 0.000 intron (NM_001366844, intron 1 of 19) intron (NM_001366844, intron 1 of 19) 452 NM_001284307 64397 Hs.511143 NM_022473 ENSG00000103994 ZNF106 SH3BP3|ZFP106|ZNF474 zinc finger protein 106 protein-coding chr9-986 chr9 129938445 129938689 + 17.2 0.000 intron (NM_001363755, intron 6 of 15) intron (NM_001363755, intron 6 of 15) 68962 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr13-406 chr13 99496658 99496902 + 17.2 0.000 intron (NR_110731, intron 2 of 4) MER51A|LTR|ERV1 2526 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr8-471 chr8 22168714 22168958 + 17.2 0.000 intron (NR_033404, intron 1 of 15) intron (NR_033404, intron 1 of 15) 3464 NM_006129 649 Hs.1274 NM_001199 ENSG00000168487 BMP1 OI13|PCOLC|PCP|PCP2|TLD bone morphogenetic protein 1 protein-coding chr2-1227 chr2 42770370 42770614 + 17.2 0.000 intron (NM_012205, intron 5 of 9) intron (NM_012205, intron 5 of 9) -6231 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr12-563 chr12 6873230 6873474 + 17.2 0.000 promoter-TSS (NM_032641) promoter-TSS (NM_032641) -49 NM_032641 84727 Hs.479856 NM_032641 ENSG00000111671 SPSB2 GRCC9|SSB2 splA/ryanodine receptor domain and SOCS box containing 2 protein-coding chr3-754 chr3 107430081 107430325 + 17.2 0.000 promoter-TSS (NR_110039) promoter-TSS (NR_110039) -727 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr4-752 chr4 143514428 143514672 + 17.2 0.000 non-coding (NR_104027, exon 1 of 2) non-coding (NR_104027, exon 1 of 2) 287 NR_104027 100128055 Hs.707570 NR_104027 ENSG00000245112 SMARCA5-AS1 - SMARCA5 antisense RNA 1 ncRNA chr1-1824 chr1 119140333 119140577 + 17.2 0.000 promoter-TSS (NR_125977) promoter-TSS (NR_125977) 59 NR_125976 101929147 Hs.697821 NR_125974 ENSG00000231365 WARS2-AS1 - WARS2 antisense RNA 1 ncRNA chr6-110 chr6 2245479 2245723 + 17.2 0.000 promoter-TSS (NM_001500) promoter-TSS (NM_001500) 4 NM_001500 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr3-820 chr3 13538030 13538274 + 17.2 0.000 Intergenic Intergenic -10973 NM_001004019 2199 Hs.198862 NM_001998 ENSG00000163520 FBLN2 - fibulin 2 protein-coding chr3-799 chr3 180602048 180602292 + 17.2 0.000 promoter-TSS (NM_133462) promoter-TSS (NM_133462) 7 NM_001288582 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding chr2-1965 chr2 231753939 231754183 + 17.2 0.000 intron (NM_002601, intron 1 of 4) intron (NM_002601, intron 1 of 4) 27221 NM_002601 5147 Hs.516808 NM_002601 ENSG00000156973 PDE6D JBTS22|PDED phosphodiesterase 6D protein-coding chr19-571 chr19 3036162 3036406 + 17.2 0.000 intron (NM_001144761, intron 2 of 19) CpG -6670 NM_001144762 7089 Hs.332173 NM_003260 ENSG00000065717 TLE2 ESG|ESG2|GRG2 TLE family member 2, transcriptional corepressor protein-coding chr10-1219 chr10 89284037 89284281 + 17.2 0.000 Intergenic Intergenic -17887 NM_001547 3433 Hs.437609 NM_001547 ENSG00000119922 IFIT2 G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 interferon induced protein with tetratricopeptide repeats 2 protein-coding chr15-649 chr15 52837449 52837693 + 17.2 0.000 Intergenic MLT2B4|LTR|ERVL -47235 NM_004498 3175 Hs.555318 NM_004498 ENSG00000169856 ONECUT1 HNF-6|HNF6|HNF6A one cut homeobox 1 protein-coding chr7-1146 chr7 114819773 114820017 + 17.2 0.000 Intergenic Intergenic -102259 NM_199072 29969 Hs.741413 NM_199072 ENSG00000135272 MDFIC HIC|MDFIC1 MyoD family inhibitor domain containing protein-coding chr22-718 chr22 44026092 44026336 + 17.2 0.000 promoter-TSS (NM_001243386) promoter-TSS (NM_001243386) -90 NM_001243386 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr14-660 chr14 91294208 91294452 + 17.2 0.000 intron (NM_001080414, intron 22 of 29) intron (NM_001080414, intron 22 of 29) -40450 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr7-918 chr7 19117224 19117468 + 17.2 0.000 non-coding (NR_149001, exon 1 of 3) non-coding (NR_149001, exon 1 of 3) 290 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr10-636 chr10 48605116 48605360 + 17.2 0.000 promoter-TSS (NR_144645) promoter-TSS (NR_144645) -107 NM_001347737 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr11-1677 chr11 130390030 130390274 + 17.2 0.000 intron (NR_148980, intron 2 of 6) intron (NR_148980, intron 2 of 6) 38457 NM_007037 11095 Hs.271605 NM_007037 ENSG00000134917 ADAMTS8 ADAM-TS8|METH2 ADAM metallopeptidase with thrombospondin type 1 motif 8 protein-coding chr9-940 chr9 114250167 114250411 + 17.2 0.000 intron (NM_032888, intron 24 of 60) intron (NM_032888, intron 24 of 60) 40855 NR_030255 619556 NR_030255 ENSG00000207726 MIR455 MIRN455|hsa-mir-455|mir-455 microRNA 455 ncRNA chr9-1218 chr9 73171995 73172239 + 17.2 0.000 Intergenic Intergenic 20252 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding chr17-1389 chr17 72030564 72030808 + 17.2 0.000 promoter-TSS (NR_110124) promoter-TSS (NR_110124) 32 NR_110124 102606463 Hs.512309 NR_110124 ENSG00000256124 LINC01152 CMPD|TCONS_00025128 long intergenic non-protein coding RNA 1152 ncRNA chr9-1349 chr9 129698527 129698771 + 17.2 0.000 intron (NM_016307, intron 1 of 3) intron (NM_016307, intron 1 of 3) 20057 NR_132102 101929437 Hs.112596 NR_132102 ENSG00000236024 PRRX2-AS1 - PRRX2 antisense RNA 1 ncRNA chr11-1615 chr11 87437925 87438169 + 17.2 0.000 Intergenic Intergenic 281364 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr16-783 chr16 2175834 2176078 + 17.2 0.000 intron (NM_032271, intron 18 of 20) intron (NM_032271, intron 18 of 20) 20174 NM_032271 84231 Hs.713632 NM_032271 ENSG00000131653 TRAF7 CAFDADD|RFWD1|RNF119 TNF receptor associated factor 7 protein-coding chr21-206 chr21 33605945 33606189 + 17.2 0.000 intron (NM_145858, intron 6 of 12) intron (NM_145858, intron 6 of 12) -17383 NM_017613 29980 Hs.436341 NM_017613 ENSG00000159147 DONSON B17|C21orf60|MIMIS|MISSLA downstream neighbor of SON protein-coding chrX-426 chrX 20990758 20991002 + 17.2 0.000 Intergenic THE1C|LTR|ERVL-MaLR -383538 NM_014927 22866 Hs.555917 NM_014927 ENSG00000149970 CNKSR2 CNK2|KSR2|MAGUIN|MRXSHG connector enhancer of kinase suppressor of Ras 2 protein-coding chr17-1083 chr17 82302467 82302711 + 17.2 0.000 Intergenic Intergenic -9775 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr3-1473 chr3 178585045 178585289 + 17.2 0.000 intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 26317 NM_005832 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding chr20-498 chr20 45946102 45946346 + 17.2 0.000 exon (NM_022104, exon 14 of 17) exon (NM_022104, exon 14 of 17) 11541 NM_022104 63935 Hs.472856 NM_022104 ENSG00000100982 PCIF1 C20orf67|CAPAM|PPP1R121|hCAPAM|hPCIF1 PDX1 C-terminal inhibiting factor 1 protein-coding chr2-1353 chr2 196403625 196403869 + 17.2 0.000 intron (NM_020760, intron 2 of 28) intron (NM_020760, intron 2 of 28) -41570 NM_001304840 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr14-536 chr14 56199118 56199362 + 17.2 0.000 intron (NM_021255, intron 2 of 5) intron (NM_021255, intron 2 of 5) 80829 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr15-707 chr15 78873551 78873795 + 17.2 0.000 intron (NM_001265604, intron 1 of 11) CpG 684 NM_001265604 10933 Hs.374503 NM_006791 ENSG00000185787 MORF4L1 Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6 mortality factor 4 like 1 protein-coding chr16-1219 chr16 87709338 87709582 + 17.2 0.000 non-coding (NR_147833, exon 10 of 12) non-coding (NR_147833, exon 10 of 12) 56526 NM_001351938 54758 Hs.123450 NM_017566 ENSG00000104731 KLHDC4 - kelch domain containing 4 protein-coding GL000225.1-10 GL000225.1 110598 110842 + 17.2 0.000 NA NA NA NA chr2-1986 chr2 238263474 238263718 + 17.2 0.000 intron (NM_022817, intron 9 of 22) intron (NM_022817, intron 9 of 22) -23558 NM_001282434 55502 Hs.42949 NM_018645 ENSG00000144485 HES6 C-HAIRY1|HES-6|bHLHb41|bHLHc23 hes family bHLH transcription factor 6 protein-coding chr8-172 chr8 30082306 30082550 + 17.2 0.000 intron (NM_016127, intron 1 of 5) intron (NM_016127, intron 1 of 5) 636 NM_016127 51669 Hs.521487 NM_016127 ENSG00000133872 SARAF FOAP-7|HSPC035|TMEM66|XTP3 store-operated calcium entry associated regulatory factor protein-coding chr1-1470 chr1 3215409 3215653 + 17.2 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 87556 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chrX-236 chrX 155026641 155026885 + 17.2 0.000 promoter-TSS (NM_023934) promoter-TSS (NM_023934) -81 NM_023934 65991 Hs.356050 NM_023934 ENSG00000165775 FUNDC2 DC44|HCBP6|HCC3|PD03104 FUN14 domain containing 2 protein-coding chr10-471 chr10 79487783 79488027 + 17.2 0.000 Intergenic Intergenic 23077 NR_136625 729815 Hs.564060 NR_136624 ENSG00000235705 LOC729815 - uncharacterized LOC729815 ncRNA chr16-1065 chr16 10871118 10871362 + 17.2 0.000 Intergenic Intergenic -5958 NM_000246 4261 Hs.592051 NM_000246 ENSG00000179583 CIITA C2TA|CIITAIV|MHC2TA|NLRA class II major histocompatibility complex transactivator protein-coding chr18-213 chr18 808384 808628 + 17.2 0.000 intron (NM_005433, intron 1 of 11) intron (NM_005433, intron 1 of 11) 3736 NM_005433 7525 Hs.194148 NM_005433 ENSG00000176105 YES1 HsT441|P61-YES|Yes|c-yes YES proto-oncogene 1, Src family tyrosine kinase protein-coding chr10-1289 chr10 116671516 116671760 + 17.2 0.000 3' UTR (NM_025015, exon 12 of 12) 3' UTR (NM_025015, exon 12 of 12) -1356 NM_001330142 143379 Hs.121347 NM_144661 ENSG00000165863 C10orf82 - chromosome 10 open reading frame 82 protein-coding chr12-1238 chr12 117741286 117741530 + 17.2 0.000 intron (NM_173598, intron 4 of 19) AluJo|SINE|Alu 227582 NM_173598 283455 Hs.375836 NM_173598 ENSG00000171435 KSR2 - kinase suppressor of ras 2 protein-coding chr18-138 chr18 37393858 37394102 + 17.2 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 72524 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr7-978 chr7 77426647 77426891 + 17.2 0.000 Intergenic Intergenic -10420 NR_146938 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding chr5-1003 chr5 32171172 32171416 + 17.2 0.000 intron (NM_022130, intron 1 of 3) MER30|DNA|hAT-Charlie 3025 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding chr2-1958 chr2 228841725 228841969 + 17.2 0.000 Intergenic Intergenic -230452 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA chr6-604 chr6 63597851 63598095 + 17.2 0.000 Intergenic MER5B|DNA|hAT-Charlie 25961 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr19-1210 chr19 16383237 16383481 + 17.2 0.000 intron (NM_021235, intron 21 of 22) intron (NM_021235, intron 21 of 22) 58533 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chrX-475 chrX 65595426 65595670 + 17.2 0.000 Intergenic Intergenic -43127 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr3-873 chr3 130950733 130950977 + 17.2 0.000 intron (NM_001001485, intron 8 of 27) intron (NM_001001485, intron 8 of 27) 56265 NM_001001486 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding chr4-1014 chr4 85260373 85260617 + 17.2 0.000 Intergenic Intergenic -214655 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr16-1200 chr16 85311540 85311784 + 17.2 0.000 Intergenic Intergenic -5337 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr10-658 chr10 86969341 86969585 + 17.2 0.000 promoter-TSS (NM_133447) promoter-TSS (NM_133447) -873 NM_133447 119385 Hs.511787 NM_133447 AGAP11 - ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 protein-coding chr1-2222 chr1 9270649 9270893 + 17.2 0.000 3' UTR (NM_004285, exon 5 of 5) 3' UTR (NM_004285, exon 5 of 5) -22123 NM_025106 80176 Hs.8261 NM_025106 ENSG00000171621 SPSB1 SSB-1|SSB1 splA/ryanodine receptor domain and SOCS box containing 1 protein-coding chr12-1104 chr12 49883803 49884047 + 17.2 0.000 intron (NM_012306, intron 11 of 11) L2a|LINE|L2 19975 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr5-1056 chr5 73464378 73464622 + 17.2 0.000 intron (NR_126410, intron 3 of 4) intron (NR_126410, intron 3 of 4) 8466 NR_126410 104355294 Hs.127927 NR_126410 ENSG00000251324 LINC01386 - long intergenic non-protein coding RNA 1386 ncRNA chr8-989 chr8 142777627 142777871 + 17.2 0.000 promoter-TSS (NM_177476) promoter-TSS (NM_177476) 123 NM_177457 66004 Hs.158665 NM_177457 ENSG00000180155 LYNX1 - Ly6/neurotoxin 1 protein-coding chr2-1184 chr2 7010575 7010819 + 17.2 0.000 intron (NM_001349184, intron 3 of 8) intron (NM_001349184, intron 3 of 8) 67183 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA chr9-1047 chr9 137369782 137370026 + 17.2 0.000 intron (NM_001286823, intron 5 of 7) intron (NM_001286823, intron 5 of 7) 53258 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr7-765 chr7 100168214 100168458 + 17.2 0.000 intron (NM_024637, intron 1 of 3) intron (NM_024637, intron 1 of 3) 281 NM_024637 79690 Hs.44856 NM_024637 ENSG00000197093 GAL3ST4 GAL3ST-4 galactose-3-O-sulfotransferase 4 protein-coding chr3-366 chr3 9498078 9498322 + 17.2 0.000 TTS (NM_198560) TTS (NM_198560) 55622 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr2-977 chr2 110115470 110115714 + 17.2 0.000 intron (NM_005434, intron 1 of 3) CpG 974 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding chr3-723 chr3 48223149 48223393 + 17.2 0.000 promoter-TSS (NM_004345) promoter-TSS (NM_004345) -224 NM_004345 820 Hs.51120 NM_004345 ENSG00000164047 CAMP CAP-18|CAP18|CRAMP|FALL-39|FALL39|HSD26|LL37 cathelicidin antimicrobial peptide protein-coding chr21-87 chr21 46295647 46295891 + 17.2 0.000 intron (NM_001314025, intron 3 of 4) intron (NM_001314025, intron 3 of 4) 9427 NM_058181 54059 Hs.474066 NM_058181 ENSG00000182362 YBEY C21orf57 ybeY metalloendoribonuclease protein-coding chr3-1210 chr3 9903319 9903563 + 17.2 0.000 intron (NM_153483, intron 3 of 16) intron (NM_153483, intron 3 of 16) 593 NM_153481 132014 Hs.390823 NM_144640 ENSG00000163701 IL17RE - interleukin 17 receptor E protein-coding chr6-289 chr6 119147062 119147306 + 17.2 0.000 intron (NM_001288576, intron 1 of 15) intron (NM_001288576, intron 1 of 15) 2009 NM_001288576 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr11-1495 chr11 61082868 61083112 + 17.2 0.000 Intergenic Intergenic -10973 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr7-842 chr7 66741336 66741580 + 17.2 0.000 intron (NM_001367749, intron 1 of 4) CpG 725 NM_014504 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr16-1002 chr16 324038 324282 + 17.2 0.000 intron (NM_003502, intron 2 of 10) intron (NM_003502, intron 2 of 10) 28563 NM_181050 8312 Hs.592082 NM_003502 ENSG00000103126 AXIN1 AXIN|PPP1R49 axin 1 protein-coding chr15-467 chr15 43133758 43134002 + 17.2 0.000 exon (NM_001347031, exon 1 of 11) exon (NM_001347031, exon 1 of 11) 294 NM_024956 80021 Hs.511175 NM_024956 ENSG00000137842 TMEM62 - transmembrane protein 62 protein-coding chr7-831 chr7 38858414 38858658 + 17.2 0.000 intron (NM_014396, intron 4 of 28) MER4D1|LTR|ERV1 50655 NM_014396 27072 Hs.592184 NM_014396 ENSG00000006715 VPS41 HVPS41|HVSP41|hVps41p VPS41 subunit of HOPS complex protein-coding chr3-943 chr3 42773043 42773287 + 17.2 0.000 promoter-TSS (NM_144719) promoter-TSS (NM_144719) 88 NM_144719 152206 Hs.604182 NM_144719 ENSG00000244607 CCDC13 - coiled-coil domain containing 13 protein-coding chr1-1427 chr1 200891287 200891531 + 17.2 0.000 promoter-TSS (NM_018265) promoter-TSS (NM_018265) -122 NM_018265 55765 Hs.518997 NM_018265 ENSG00000163362 INAVA C1orf106 innate immunity activator protein-coding chr17-992 chr17 48593203 48593447 + 17.2 0.000 exon (NM_002147, exon 1 of 2) exon (NM_002147, exon 1 of 2) 416 NM_002147 3215 Hs.654456 NM_002147 ENSG00000120075 HOXB5 HHO.C10|HOX2|HOX2A|HU-1|Hox2.1 homeobox B5 protein-coding chr19-856 chr19 6213285 6213529 + 17.2 0.000 exon (NM_005934, exon 11 of 12) exon (NM_005934, exon 11 of 12) 66568 NM_005934 4298 Hs.10095 NM_005934 ENSG00000130382 MLLT1 ENL|LTG19|YEATS1 MLLT1 super elongation complex subunit protein-coding chr10-777 chr10 3225664 3225908 + 17.2 0.000 Intergenic L4_A_Mam|LINE|RTE-X -52945 NM_001242307 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding GL000225.1-51 GL000225.1 125700 125944 + 17.2 0.000 NA NA NA NA chr19-1448 chr19 3210173 3210417 + 17.2 0.000 TTS (NM_001321463) TTS (NM_001321463) -14366 NM_021938 60680 Hs.655747 NM_021938 ENSG00000161082 CELF5 BRUNOL-5|BRUNOL5|CELF-5 CUGBP Elav-like family member 5 protein-coding chr7-1325 chr7 77010139 77010383 + 17.2 0.000 intron (NR_023383, intron 6 of 10) intron (NR_023383, intron 6 of 10) 20309 NM_001351349 100996746 Hs.645327 NM_001351349 ENSG00000286228 SPDYE11 - speedy/RINGO cell cycle regulator family member E11 protein-coding chr1-2588 chr1 192414667 192414911 + 17.2 0.000 Intergenic L1PA7|LINE|L1 97797 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding chr2-1952 chr2 226115166 226115410 + 17.2 0.000 Intergenic Intergenic -27506 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA chr1-2339 chr1 36266458 36266702 + 17.2 0.000 intron (NM_001321471, intron 3 of 12) intron (NM_001321471, intron 3 of 12) -39788 NM_001162530 79729 Hs.524496 NM_024676 ENSG00000214193 SH3D21 C1orf113 SH3 domain containing 21 protein-coding chr6-1075 chr6 136782470 136782714 + 17.2 0.000 intron (NM_005923, intron 1 of 29) intron (NM_005923, intron 1 of 29) -1455 NR_134635 101928429 Hs.672896 NR_134635 LOC101928429 - uncharacterized LOC101928429 ncRNA chr11-1407 chr11 4165583 4165827 + 17.2 0.000 Intergenic Intergenic -21447 NR_047550 100506082 Hs.445705 NR_047550 ENSG00000254480 LINC02749 - long intergenic non-protein coding RNA 2749 ncRNA chr1-2256 chr1 16148309 16148553 + 17.2 0.000 exon (NM_001329090, exon 2 of 16) exon (NM_001329090, exon 2 of 16) 7638 NM_001329090 1969 Hs.171596 NM_004431 ENSG00000142627 EPHA2 ARCC2|CTPA|CTPP1|CTRCT6|ECK EPH receptor A2 protein-coding chr17-901 chr17 82219167 82219411 + 17.2 0.000 Intergenic Intergenic -6447 NM_001316321 284001 Hs.631724 NM_152675 ENSG00000176155 CCDC57 - coiled-coil domain containing 57 protein-coding chr10-654 chr10 79312106 79312350 + 17.1 0.000 intron (NM_020338, intron 24 of 24) intron (NM_020338, intron 24 of 24) -35241 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr13-214 chr13 51643339 51643583 + 17.1 0.000 intron (NM_052950, intron 1 of 11) L2b|LINE|L2 58999 NM_052950 115825 Hs.46506 NM_052950 ENSG00000139668 WDFY2 PROF|WDF2|ZFYVE22 WD repeat and FYVE domain containing 2 protein-coding chr2-1274 chr2 85655982 85656226 + 17.1 0.000 Intergenic Intergenic 12095 NM_000542 6439 Hs.512690 NM_000542 ENSG00000168878 SFTPB PSP-B|SFTB3|SFTP3|SMDP1|SP-B surfactant protein B protein-coding chr5-561 chr5 7868960 7869204 + 17.1 0.000 promoter-TSS (NM_001364442) promoter-TSS (NM_001364442) -45 NR_073608 79072 Hs.653162 NM_024091 ENSG00000124279 FASTKD3 - FAST kinase domains 3 protein-coding chr18-363 chr18 77067640 77067884 + 17.1 0.000 intron (NM_001025100, intron 2 of 3) intron (NM_001025100, intron 2 of 3) -50707 NM_002385 4155 Hs.551713 NM_002385 ENSG00000197971 MBP - myelin basic protein protein-coding chr10-959 chr10 133257668 133257912 + 17.1 0.000 Intergenic Intergenic -9905 NR_108079 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr5-1092 chr5 121937789 121938033 + 17.1 0.000 Intergenic Intergenic -24064 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding chr12-1235 chr12 116880621 116880865 + 17.1 0.000 intron (NR_073189, intron 1 of 4) intron (NR_073189, intron 1 of 4) 698 NR_073189 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr3-898 chr3 186640554 186640798 + 17.1 0.000 exon (NM_014375, exon 1 of 7) exon (NM_014375, exon 1 of 7) 277 NM_001308077 26998 Hs.81073 NM_014375 ENSG00000090512 FETUB 16G2|Gugu|IRL685 fetuin B protein-coding chr2-1228 chr2 42792949 42793193 + 17.1 0.000 promoter-TSS (NM_012205) promoter-TSS (NM_012205) -488 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr11-1195 chr11 85886183 85886427 + 17.1 0.000 exon (NM_173556, exon 5 of 12) exon (NM_173556, exon 5 of 12) 31204 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr9-587 chr9 18474419 18474663 + 17.1 0.000 intron (NM_052866, intron 1 of 12) intron (NM_052866, intron 1 of 12) 388 NM_001040272 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr22-105 chr22 36381378 36381622 + 17.1 0.000 intron (NM_002473, intron 1 of 40) AluSz|SINE|Alu 6567 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr15-697 chr15 75758521 75758765 + 17.1 0.000 Intergenic Intergenic 3672 NR_036198 100423035 NR_036198 ENSG00000284385 MIR4313 - microRNA 4313 ncRNA chr10-641 chr10 60733130 60733374 + 17.1 0.000 intron (NM_001204403, intron 1 of 43) CpG 276 NM_001204403 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr15-246 chr15 85177348 85177592 + 17.1 0.000 Intergenic LTR18B|LTR|ERVL 57311 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo chr4-804 chr4 16598207 16598451 + 17.1 0.000 intron (NM_001304435, intron 2 of 7) MLT1G1|LTR|ERVL-MaLR 300316 NM_001290 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-490 chr12 119178626 119178870 + 17.1 0.000 promoter-TSS (NM_014365) promoter-TSS (NM_014365) -42 NM_014365 26353 Hs.400095 NM_014365 ENSG00000152137 HSPB8 CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22 heat shock protein family B (small) member 8 protein-coding chr2-1889 chr2 190809295 190809539 + 17.1 0.000 Intergenic Intergenic -71404 NM_001256310 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr1-994 chr1 11790872 11791116 + 17.1 0.000 intron (NM_001330358, intron 11 of 11) intron (NM_001330358, intron 11 of 11) -11375 NR_126000 102724659 Hs.737635 NR_126000 ENSG00000177553 LOC102724659 - uncharacterized LOC102724659 ncRNA chr4-478 chr4 151093102 151093346 + 17.1 0.000 Intergenic AluJb|SINE|Alu -6349 NM_001267699 6189 Hs.356572 NM_001006 ENSG00000145425 RPS3A FTE1|MFTL|S3A ribosomal protein S3A protein-coding chr16-816 chr16 48353639 48353883 + 17.1 0.000 3' UTR (NM_001300948, exon 14 of 14) 3' UTR (NM_001300948, exon 14 of 14) 12126 NM_001006610 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding chr6-453 chr6 38262469 38262713 + 17.1 0.000 intron (NM_052893, intron 9 of 11) intron (NM_052893, intron 9 of 11) -219005 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA chr3-471 chr3 32238989 32239233 + 17.1 0.000 exon (NM_001320308, exon 1 of 3) exon (NM_001320308, exon 1 of 3) 431 NM_178868 152189 Hs.154986 NM_178868 ENSG00000170293 CMTM8 CKLFSF8|CKLFSF8-V2 CKLF like MARVEL transmembrane domain containing 8 protein-coding chr17-871 chr17 58631494 58631738 + 17.1 0.000 intron (NM_031272, intron 2 of 31) intron (NM_031272, intron 2 of 31) 60439 NM_198393 56155 Hs.390221 NM_031272 ENSG00000121101 TEX14 CT113|SPGF23 testis expressed 14, intercellular bridge forming factor protein-coding chr17-1160 chr17 59753474 59753718 + 17.1 0.000 intron (NM_001329401, intron 4 of 9) intron (NM_001329401, intron 4 of 9) 45942 NM_001329401 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding chr17-1392 chr17 73030699 73030943 + 17.1 0.000 intron (NM_001352692, intron 4 of 9) intron (NM_001352692, intron 4 of 9) 61867 NM_001352691 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr8-958 chr8 127366080 127366324 + 17.1 0.000 intron (NR_117099, intron 3 of 3) intron (NR_117099, intron 3 of 3) -34197 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA chr21-148 chr21 42040552 42040796 + 17.1 0.000 Intergenic Intergenic 18405 NR_027273 150142 Hs.143833 NM_198078 ENSG00000237232 ZNF295-AS1 C21orf121|NCRNA00318|PRED87 ZNF295 antisense RNA 1 ncRNA chr1-2066 chr1 151051564 151051808 + 17.1 0.000 TTS (NM_017860) TTS (NM_017860) 3935 NM_017860 54964 Hs.549171 NM_017860 ENSG00000143443 C1orf56 MENT chromosome 1 open reading frame 56 protein-coding chr9-946 chr9 117365801 117366045 + 17.1 0.000 intron (NM_014010, intron 1 of 21) intron (NM_014010, intron 1 of 21) 49134 NM_014010 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr14-710 chr14 55103173 55103417 + 17.1 0.000 Intergenic Intergenic -25957 NM_001357678 3958 Hs.531081 NM_002306 ENSG00000131981 LGALS3 CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2 galectin 3 protein-coding chr8-265 chr8 85973576 85973820 + 17.1 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 95970 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding chr9-459 chr9 137110498 137110742 + 17.1 0.000 TTS (NM_013379) TTS (NM_013379) 4113 NM_013379 29952 Hs.37916 NM_013379 ENSG00000176978 DPP7 DPP2|DPPII|QPP dipeptidyl peptidase 7 protein-coding chr11-1178 chr11 75207749 75207993 + 17.1 0.000 Intergenic Intergenic -32903 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr11-394 chr11 72038503 72038747 + 17.1 0.000 intron (NR_104476, intron 2 of 24) intron (NR_104476, intron 2 of 24) 24334 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr17-1305 chr17 41732004 41732248 + 17.1 0.000 intron (NM_001367460, intron 3 of 11) intron (NM_001367460, intron 3 of 11) 2517 NM_001367461 9001 Hs.158300 NM_003949 ENSG00000173805 HAP1 HAP2|HIP5|HLP|hHLP1 huntingtin associated protein 1 protein-coding chr2-1077 chr2 34551835 34552079 + 17.1 0.000 Intergenic Intergenic -125600 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA chr1-1141 chr1 21607876 21608120 + 17.1 0.000 intron (NM_001350526, intron 20 of 28) intron (NM_001350526, intron 20 of 28) 43900 NM_001145658 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr8-343 chr8 47825444 47825688 + 17.1 0.000 intron (NM_001081640, intron 63 of 84) intron (NM_001081640, intron 63 of 84) -87402 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr17-1223 chr17 4444617 4444861 + 17.1 0.000 intron (NM_001320449, intron 2 of 10) intron (NM_001320449, intron 2 of 10) 10799 NM_001320449 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr19-1150 chr19 1887546 1887790 + 17.1 0.000 Intergenic Intergenic -2172 NM_001130111 81926 Hs.465542 NM_031213 ENSG00000129968 ABHD17A C19orf27|FAM108A1 abhydrolase domain containing 17A protein-coding chr2-556 chr2 79860487 79860731 + 17.1 0.000 intron (NM_001282598, intron 4 of 17) intron (NM_001282598, intron 4 of 17) 5974 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA chr22-714 chr22 43210737 43210981 + 17.1 0.000 intron (NM_173050, intron 18 of 21) intron (NM_173050, intron 18 of 21) -1815 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr20-379 chr20 49914415 49914659 + 17.1 0.000 promoter-TSS (NM_001135773) promoter-TSS (NM_001135773) -798 NM_001135773 9825 Hs.48513 NM_006038 ENSG00000158480 SPATA2 PD1|PPP1R145|tamo spermatogenesis associated 2 protein-coding chr4-728 chr4 101977112 101977356 + 17.1 0.000 intron (NM_017935, intron 7 of 16) MLT1I|LTR|ERVL-MaLR 163392 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr10-733 chr10 63630203 63630447 + 17.1 0.000 Intergenic CpG -108435 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr19-1284 chr19 49362738 49362982 + 17.1 0.000 promoter-TSS (NM_001256658) promoter-TSS (NM_001256658) -444 NM_003598 8463 Hs.515534 NM_003598 ENSG00000074219 TEAD2 ETF|TEAD-2|TEF-4|TEF4 TEA domain transcription factor 2 protein-coding chr11-1488 chr11 47469054 47469298 + 17.1 0.000 3' UTR (NM_001172640, exon 13 of 13) 3' UTR (NM_001172640, exon 13 of 13) 19848 NM_001172640 10658 Hs.595333 NM_006560 ENSG00000149187 CELF1 BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 CUGBP Elav-like family member 1 protein-coding chr7-812 chr7 2474388 2474632 + 17.1 0.000 TTS (NM_001291784) TTS (NM_001291784) 1873 NM_001291784 402635 NM_001291784 GRIFIN - galectin-related inter-fiber protein protein-coding chr20-397 chr20 2690820 2691064 + 17.1 0.000 Intergenic Intergenic -1838 NR_138537 57593 Hs.471955 NM_020833 ENSG00000088881 EBF4 COE4|O/E-4 EBF family member 4 protein-coding chrX-11 chrX 1366366 1366610 + 17.1 0.000 intron (NM_002183, intron 9 of 11) CpG 25625 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr1-2580 chr1 184296944 184297188 + 17.1 0.000 Intergenic X9_LINE|LINE|L1 -89963 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding chr3-738 chr3 58435159 58435403 + 17.1 0.000 Intergenic Intergenic -1429 NM_001315536 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr1-2028 chr1 41783321 41783565 + 17.1 0.000 intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 135479 NR_038260 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding chr18-271 chr18 29605829 29606073 + 17.1 0.000 Intergenic THE1B-int|LTR|ERVL-MaLR -692959 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA chr11-1231 chr11 125216669 125216913 + 17.1 0.000 intron (NM_022062, intron 1 of 12) intron (NM_022062, intron 1 of 12) 52040 NM_022062 63876 Hs.278564 NM_022062 ENSG00000165495 PKNOX2 PREP2 PBX/knotted 1 homeobox 2 protein-coding chr11-701 chr11 2199850 2200094 + 17.1 0.000 Intergenic Intergenic 26909 NR_039834 100616126 NR_039834 ENSG00000265258 MIR4686 - microRNA 4686 ncRNA chr2-1603 chr2 9222369 9222613 + 17.1 0.000 intron (NM_003887, intron 1 of 27) intron (NM_003887, intron 1 of 27) 15679 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr22-637 chr22 28443493 28443737 + 17.1 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -16254 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr7-1081 chr7 7176471 7176715 + 17.1 0.000 Intergenic Intergenic -6022 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding chr7-1298 chr7 50393666 50393910 + 17.1 0.000 intron (NM_001220765, intron 6 of 6) intron (NM_001220765, intron 6 of 6) 56562 NM_001346564 63979 Hs.137516 NM_022116 ENSG00000132436 FIGNL1 - fidgetin like 1 protein-coding chr11-1084 chr11 35662946 35663190 + 17.1 0.000 5' UTR (NM_017583, exon 1 of 5) 5' UTR (NM_017583, exon 1 of 5) 293 NM_017583 54765 Hs.192103 NM_017583 ENSG00000166326 TRIM44 AN3|DIPB|HSA249128|MC7 tripartite motif containing 44 protein-coding chr5-32 chr5 1867223 1867467 + 17.1 0.000 Intergenic Intergenic -10777 NR_104602 101929034 Hs.128032 NR_104602 ENSG00000250417 LINC02116 - long intergenic non-protein coding RNA 2116 ncRNA chrX-342 chrX 153477830 153478074 + 17.1 0.000 intron (NR_073156, intron 1 of 12) intron (NR_073156, intron 1 of 12) -7321 NM_017518 55559 Hs.170835 NM_017518 ENSG00000213397 HAUS7 UCHL5IP|UIP1 HAUS augmin like complex subunit 7 protein-coding chr3-844 chr3 58414592 58414836 + 17.1 0.000 intron (NM_017771, intron 17 of 17) intron (NM_017771, intron 17 of 17) 19118 NM_000925 5162 Hs.161357 NM_000925 ENSG00000168291 PDHB PDHBD|PDHE1-B|PDHE1B|PHE1B pyruvate dehydrogenase E1 beta subunit protein-coding chr2-1690 chr2 46690937 46691181 + 17.1 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -7901 NM_014011 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding chr18-308 chr18 13136845 13137089 + 17.1 0.000 Intergenic CpG -81793 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding chr17-1251 chr17 16269604 16269848 + 17.1 0.000 intron (NM_004278, intron 2 of 6) MER5B|DNA|hAT-Charlie -12288 NR_031698 100302124 NR_031698 ENSG00000221355 MIR1288 MIRN1288|hsa-mir-1288 microRNA 1288 ncRNA chr3-1408 chr3 131540391 131540635 + 17.1 0.000 intron (NM_130808, intron 15 of 15) intron (NM_130808, intron 15 of 15) -37542 NM_007208 11222 Hs.205163 NM_007208 ENSG00000114686 MRPL3 COXPD9|MRL3|RPML3 mitochondrial ribosomal protein L3 protein-coding chr3-516 chr3 32780914 32781158 + 17.1 0.000 Intergenic CpG -36961 NM_001039111 131405 Hs.113170 NM_001039111 ENSG00000206557 TRIM71 LIN-41|LIN41 tripartite motif containing 71 protein-coding chr2-1323 chr2 156476983 156477227 + 17.1 0.000 intron (NM_000408, intron 2 of 16) intron (NM_000408, intron 2 of 16) 40726 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding chr17-1038 chr17 75693633 75693877 + 17.1 0.000 intron (NR_126037, intron 4 of 8) intron (NR_126037, intron 4 of 8) 26417 NM_013260 29115 Hs.655088 NM_013260 ENSG00000161526 SAP30BP HCNGP|HTRG|HTRP SAP30 binding protein protein-coding chr9-1032 chr9 136686163 136686407 + 17.1 0.000 intron (NM_006412, intron 1 of 5) intron (NM_006412, intron 1 of 5) 1172 NM_001012727 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr17-707 chr17 68705010 68705254 + 17.1 0.000 Intergenic Intergenic 76978 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA chr17-1241 chr17 8998290 8998534 + 17.1 0.000 Intergenic MIR|SINE|MIR -23098 NM_004822 9423 Hs.660885 NM_004822 ENSG00000065320 NTN1 MRMV4|NTN1L netrin 1 protein-coding chr5-1096 chr5 124661404 124661648 + 17.1 0.000 intron (NM_020747, intron 2 of 8) intron (NM_020747, intron 2 of 8) 83586 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr17-513 chr17 69326913 69327157 + 17.1 0.000 promoter-TSS (NM_172232) promoter-TSS (NM_172232) 98 NM_172232 23461 Hs.731824 NM_018672 ENSG00000154265 ABCA5 ABC13|EST90625|HTC3 ATP binding cassette subfamily A member 5 protein-coding chr17-159 chr17 77140631 77140875 + 17.1 0.000 promoter-TSS (NM_001143998) promoter-TSS (NM_001143998) -216 NM_001143999 6397 Hs.464184 NM_003003 ENSG00000129657 SEC14L1 PRELID4A|SEC14L SEC14 like lipid binding 1 protein-coding chr7-745 chr7 72879822 72880066 + 17.1 0.000 intron (NM_001257190, intron 1 of 15) CpG 587 NM_001367610 9883 Hs.655217 NM_172020 ENSG00000196313 POM121 P145|POM121A POM121 transmembrane nucleoporin protein-coding chr2-540 chr2 11664025 11664269 + 17.1 0.000 intron (NM_012344, intron 1 of 3) AluJb|SINE|Alu 6048 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr2-1854 chr2 159896873 159897117 + 17.1 0.000 intron (NM_002349, intron 2 of 34) intron (NM_002349, intron 2 of 34) 7761 NM_001198760 100526664 Hs.153563 NM_001198759 ENSG00000248672 LY75-CD302 CD205|CLEC13B|DEC-205|LY75|Ly-75|gp200-MR6 LY75-CD302 readthrough protein-coding chr15-220 chr15 45587620 45587864 + 17.1 0.000 promoter-TSS (NR_132359) promoter-TSS (NR_132359) -30 NR_132357 26258 Hs.7037 NM_012388 ENSG00000104164 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex 1 subunit 6 protein-coding chr11-440 chr11 94544519 94544763 + 17.1 0.000 TTS (NR_135093) TTS (NR_135093) 790 NM_002033 2526 Hs.390420 NM_002033 ENSG00000196371 FUT4 CD15|ELFT|FCT3A|FUC-TIV|FUTIV|LeX|SSEA-1 fucosyltransferase 4 protein-coding chr1-2094 chr1 175575660 175575904 + 17.1 0.000 intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 167813 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding chr6-340 chr6 1624167 1624411 + 17.1 0.000 intron (NM_001253846, intron 10 of 10) CpG 14374 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr2-809 chr2 231786723 231786967 + 17.1 0.000 intron (NM_001308381, intron 1 of 7) intron (NM_001308381, intron 1 of 7) 400 NM_022730 64708 Hs.335061 NM_022730 ENSG00000144524 COPS7B CSN7B|SGN7b COP9 signalosome subunit 7B protein-coding chr19-1544 chr19 17967423 17967667 + 17.1 0.000 intron (NM_002248, intron 2 of 10) intron (NM_002248, intron 2 of 10) 16243 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr1-1521 chr1 71014100 71014344 + 17.1 0.000 intron (NM_198719, intron 1 of 3) intron (NM_198719, intron 1 of 3) -32284 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA chr10-1103 chr10 22436667 22436911 + 17.1 0.000 non-coding (NR_036533, exon 1 of 1) non-coding (NR_036533, exon 1 of 1) 1140 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA chr20-442 chr20 50573075 50573319 + 17.1 0.000 intron (NM_002827, intron 4 of 9) intron (NM_002827, intron 4 of 9) -12589 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA chr11-1151 chr11 66857566 66857810 + 17.1 0.000 5' UTR (NM_024036, exon 1 of 2) 5' UTR (NM_024036, exon 1 of 2) 624 NM_001363524 78999 Hs.209979 NM_024036 ENSG00000173621 LRFN4 FIGLER6|SALM3|SALM3. leucine rich repeat and fibronectin type III domain containing 4 protein-coding chr2-1144 chr2 196171074 196171318 + 17.1 0.000 intron (NM_004226, intron 1 of 7) CpG 382 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding chr5-976 chr5 3276771 3277015 + 17.1 0.000 Intergenic Intergenic 99058 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA KI270442.1-6 KI270442.1 70003 70247 + 17.1 0.000 NA NA NA NA chr11-1377 chr11 403591 403835 + 17.1 0.000 exon (NM_007183, exon 10 of 13) exon (NM_007183, exon 10 of 13) 9504 NM_007183 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr15-244 chr15 83447213 83447457 + 17.1 0.000 promoter-TSS (NM_003027) promoter-TSS (NM_003027) -6 NM_003027 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding chr2-762 chr2 98912533 98912777 + 17.1 0.000 intron (NM_207362, intron 1 of 9) intron (NM_207362, intron 1 of 9) 23570 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding chr4-479 chr4 153977037 153977281 + 17.1 0.000 Intergenic HAL1|LINE|L1 -188076 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding chr22-506 chr22 38865860 38866104 + 17.1 0.000 3' UTR (NM_001303494, exon 5 of 5) 3' UTR (NM_001303494, exon 5 of 5) 6234 NM_001303494 23466 Hs.592201 NM_014292 ENSG00000183741 CBX6 - chromobox 6 protein-coding chr21-251 chr21 42834579 42834823 + 17.1 0.000 Intergenic Intergenic 44574 NM_001260477 10785 Hs.248815 NM_018669 ENSG00000160193 WDR4 GAMOS6|MIGSB|TRM82|TRMT82 WD repeat domain 4 protein-coding chr7-506 chr7 36390207 36390451 + 17.1 0.000 promoter-TSS (NM_001100425) promoter-TSS (NM_001100425) 28 NM_001100425 23366 Hs.6224 NM_015314 ENSG00000164542 KIAA0895 - KIAA0895 protein-coding chr11-698 chr11 1465412 1465656 + 17.1 0.000 Intergenic Intergenic 15352 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr17-1094 chr17 846877 847121 + 17.1 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 17112 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr3-1188 chr3 187186731 187186975 + 17.1 0.000 Intergenic Intergenic -10633 NM_153708 132112 Hs.518480 NM_153708 ENSG00000175077 RTP1 Z3CXXC1 receptor transporter protein 1 protein-coding chr15-359 chr15 44288826 44289070 + 17.1 0.000 non-coding (NR_157849, exon 1 of 10) non-coding (NR_157849, exon 1 of 10) 229 NM_138423 113201 Hs.512867 NM_138423 ENSG00000166734 CASC4 H63 cancer susceptibility 4 protein-coding chr8-733 chr8 29493837 29494081 + 17.1 0.000 Intergenic L2|LINE|L2 -143275 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr18-172 chr18 10525894 10526138 + 17.1 0.000 promoter-TSS (NM_003826) promoter-TSS (NM_003826) -11 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding chr1-754 chr1 25859427 25859671 + 17.1 0.000 promoter-TSS (NM_001287490) promoter-TSS (NM_001287490) -91 NM_001287490 79000 Hs.149305 NM_024037 ENSG00000127423 AUNIP AIBP|C1orf135 aurora kinase A and ninein interacting protein protein-coding chr4-547 chr4 127586958 127587202 + 17.1 0.000 Intergenic L1PA15-16|LINE|L1 -45877 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr3-1296 chr3 50567154 50567398 + 17.1 0.000 intron (NM_016210, intron 1 of 5) MIRc|SINE|MIR 471 NM_001171743 51161 Hs.517860 NM_016210 ENSG00000088543 C3orf18 G20 chromosome 3 open reading frame 18 protein-coding chr1-1667 chr1 18875282 18875526 + 17.1 0.000 exon (NM_001319218, exon 12 of 14) exon (NM_001319218, exon 12 of 14) 7871 NR_039844 100616120 NR_039844 ENSG00000265606 MIR4695 - microRNA 4695 ncRNA chr1-2554 chr1 168709182 168709426 + 17.1 0.000 intron (NM_001937, intron 2 of 3) intron (NM_001937, intron 2 of 3) 19902 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding chr1-1359 chr1 85200699 85200943 + 17.1 0.000 exon (NM_032184, exon 1 of 7) exon (NM_032184, exon 1 of 7) 195 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chr19-1514 chr19 11195050 11195294 + 16.9 0.000 promoter-TSS (NM_015493) promoter-TSS (NM_015493) -582 NM_015493 25959 Hs.284208 NM_015493 ENSG00000197256 KANK2 ANKRD25|MXRA3|NPHS16|PPKWH|SIP KN motif and ankyrin repeat domains 2 protein-coding chr3-811 chr3 197906447 197906691 + 16.9 0.000 intron (NM_001323029, intron 9 of 11) ERVL-E-int|LTR|ERVL 43356 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding chr7-1072 chr7 2498176 2498420 + 16.9 0.000 Intergenic Intergenic -14231 NM_001166355 3955 Hs.159142 NM_002304 ENSG00000106003 LFNG SCDO3 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr16-1126 chr16 56294669 56294913 + 16.9 0.000 intron (NM_138736, intron 3 of 7) L1M5|LINE|L1 49271 NR_037499 100500891 NR_037499 ENSG00000265281 MIR3935 - microRNA 3935 ncRNA chr4-52 chr4 39768387 39768631 + 16.9 0.000 intron (NM_005339, intron 4 of 6) intron (NM_005339, intron 4 of 6) 70373 NM_005339 3093 Hs.50308 NM_005339 ENSG00000078140 UBE2K E2-25K|HIP2|HYPG|LIG|UBC1 ubiquitin conjugating enzyme E2 K protein-coding chr16-222 chr16 29961848 29962092 + 16.9 0.000 promoter-TSS (NM_001083613) promoter-TSS (NM_001083613) -109 NM_001369689 124446 Hs.460574 NM_194280 ENSG00000149932 TMEM219 IGFBP-3R transmembrane protein 219 protein-coding chr2-1522 chr2 158829081 158829325 + 16.9 0.000 Intergenic Intergenic 33886 NM_001017920 92196 Hs.59761 NM_001017920 ENSG00000163331 DAPL1 - death associated protein like 1 protein-coding chr19-1291 chr19 51746030 51746274 + 16.9 0.000 exon (NM_001193306, exon 3 of 3) exon (NM_001193306, exon 3 of 3) 5726 NM_001193306 2357 Hs.753 NM_002029 ENSG00000171051 FPR1 FMLP|FPR formyl peptide receptor 1 protein-coding chr17-1064 chr17 81115135 81115379 + 16.9 0.000 intron (NM_006340, intron 14 of 14) intron (NM_006340, intron 14 of 14) 10116 NR_030394 724027 NR_030394 ENSG00000207736 MIR657 MIRN657|hsa-mir-657 microRNA 657 ncRNA chr2-1978 chr2 237350283 237350527 + 16.9 0.000 intron (NM_057166, intron 24 of 40) intron (NM_057166, intron 24 of 40) 63759 NM_057164 1293 Hs.233240 NM_004369 ENSG00000163359 COL6A3 BTHLM1|DYT27|UCMD1 collagen type VI alpha 3 chain protein-coding chr10-1201 chr10 79139074 79139318 + 16.9 0.000 intron (NM_020338, intron 2 of 24) intron (NM_020338, intron 2 of 24) 70230 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr22-433 chr22 21847738 21847982 + 16.9 0.000 intron (NM_002745, intron 1 of 8) SVA_B|Retroposon|SVA 19820 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding chr17-1340 chr17 50840715 50840959 + 16.9 0.000 exon (NM_001330341, exon 2 of 2) exon (NM_001330341, exon 2 of 2) 5251 NM_175575 124857 Hs.211475 NM_175575 ENSG00000173714 WFIKKN2 GASP-1|WFDC20B|WFIKKNRP|hGASP-1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 protein-coding chr7-1196 chr7 2388592 2388836 + 16.9 0.000 Intergenic Intergenic -14897 NM_001243794 55501 Hs.288853 NM_018641 ENSG00000136213 CHST12 C4S-2|C4ST-2|C4ST2 carbohydrate sulfotransferase 12 protein-coding chr11-1583 chr11 73218362 73218606 + 16.9 0.000 promoter-TSS (NM_176071) promoter-TSS (NM_176071) -78 NM_176071 5029 Hs.339 NM_002564 ENSG00000175591 P2RY2 HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R purinergic receptor P2Y2 protein-coding chr17-627 chr17 47841161 47841405 + 16.9 0.000 promoter-TSS (NM_001145023) promoter-TSS (NM_001145023) -10 NM_138355 90507 Hs.239718 NM_138355 ENSG00000141295 SCRN2 Ses2 secernin 2 protein-coding chr19-1465 chr19 4126848 4127092 + 16.9 0.000 Intergenic Intergenic -2841 NM_030662 5605 Hs.465627 NM_030662 ENSG00000126934 MAP2K2 CFC4|MAPKK2|MEK2|MKK2|PRKMK2 mitogen-activated protein kinase kinase 2 protein-coding chr16-1180 chr16 79489776 79490020 + 16.9 0.000 Intergenic Intergenic 110839 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr5-1103 chr5 132264002 132264246 + 16.9 0.000 intron (NM_001131027, intron 2 of 5) intron (NM_001131027, intron 2 of 5) 6428 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr14-643 chr14 72558544 72558788 + 16.9 0.000 intron (NR_135235, intron 18 of 18) intron (NR_135235, intron 18 of 18) 41846 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA chr11-889 chr11 57214603 57214847 + 16.9 0.000 Intergenic Intergenic 22525 NR_027991 187 Hs.438311 NM_005161 ENSG00000134817 APLNR AGTRL1|APJ|APJR|HG11 apelin receptor protein-coding chr13-439 chr13 30977781 30978025 + 16.9 0.000 Intergenic Intergenic 45247 NM_152325 122046 Hs.124463 NM_152325 ENSG00000175664 TEX26 C13orf26 testis expressed 26 protein-coding chr2-1731 chr2 73257215 73257459 + 16.9 0.000 3' UTR (NM_001080410, exon 17 of 17) 3' UTR (NM_001080410, exon 17 of 17) 23029 NM_006429 10574 Hs.368149 NM_006429 ENSG00000135624 CCT7 CCTETA|CCTH|NIP7-1|TCP1ETA chaperonin containing TCP1 subunit 7 protein-coding chr15-615 chr15 36682157 36682401 + 16.9 0.000 intron (NM_001321757, intron 6 of 12) MLT2B4|LTR|ERVL 87402 NM_032499 84529 Hs.48348 NM_032499 ENSG00000186073 C15orf41 HH114 chromosome 15 open reading frame 41 protein-coding chr8-881 chr8 60277917 60278161 + 16.9 0.000 intron (NR_135821, intron 2 of 9) intron (NR_135821, intron 2 of 9) 3361 NM_004056 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding chr22-589 chr22 42884442 42884686 + 16.9 0.000 intron (NM_001184970, intron 5 of 10) intron (NM_001184970, intron 5 of 10) -27291 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr8-563 chr8 43547405 43547649 + 16.9 0.000 Intergenic GSATX|Satellite|centr 255085 NM_001005365 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr2-1644 chr2 27092698 27092942 + 16.9 0.000 intron (NM_006488, intron 2 of 7) intron (NM_006488, intron 2 of 7) 6048 NM_000221 3795 Hs.567297 NM_000221 ENSG00000138030 KHK - ketohexokinase protein-coding chr19-895 chr19 50408700 50408944 + 16.9 0.000 exon (NM_002691, exon 15 of 27) exon (NM_002691, exon 15 of 27) 9970 NM_001308632 5424 Hs.279413 NM_002691 ENSG00000062822 POLD1 CDC2|CRCS10|MDPL|POLD DNA polymerase delta 1, catalytic subunit protein-coding chr8-774 chr8 116927198 116927442 + 16.9 0.000 Intergenic Intergenic -10887 NM_001025357 441376 Hs.437551 NM_001025357 ENSG00000205002 AARD C8orf85 alanine and arginine rich domain containing protein protein-coding chr16-490 chr16 73616275 73616519 + 16.9 0.000 Intergenic Intergenic 229592 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr15-500 chr15 68187017 68187261 + 16.9 0.000 intron (NM_016166, intron 13 of 13) intron (NM_016166, intron 13 of 13) 18971 NM_001286695 91860 Hs.709550 NM_033429 ENSG00000129007 CALML4 NY-BR-20 calmodulin like 4 protein-coding chr9-811 chr9 128636322 128636566 + 16.9 0.000 intron (NM_052844, intron 3 of 8) intron (NM_052844, intron 3 of 8) 20406 NM_052844 89891 Hs.495240 NM_052844 ENSG00000119333 WDR34 DIC5|FAP133|SRTD11|bA216B9.3 WD repeat domain 34 protein-coding chr14-404 chr14 46048323 46048567 + 16.9 0.000 Intergenic L1M1|LINE|L1 -15714 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA chr6-1087 chr6 148407435 148407679 + 16.9 0.000 intron (NM_001346506, intron 2 of 20) L1MB3|LINE|L1 64719 NM_015278 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding chr1-2010 chr1 27166501 27166745 + 16.9 0.000 Intergenic L2a|LINE|L2 -11498 NR_046474 6548 Hs.469116 NM_003047 ENSG00000090020 SLC9A1 APNH|LIKNS|NHE-1|NHE1|PPP1R143 solute carrier family 9 member A1 protein-coding chr1-621 chr1 244863422 244863666 + 16.9 0.000 intron (NM_004501, intron 1 of 13) CpG 981 NM_004501 3192 Hs.106212 NM_004501 ENSG00000153187 HNRNPU EIEE54|GRIP120|HNRNPU-AS1|HNRPU|SAF-A|SAFA|U21.1|hnRNP U|pp120 heterogeneous nuclear ribonucleoprotein U protein-coding chr10-649 chr10 77603072 77603316 + 16.9 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 34614 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr11-1081 chr11 34346692 34346936 + 16.9 0.000 intron (NM_145804, intron 1 of 16) intron (NM_145804, intron 1 of 16) 11196 NM_145804 25841 Hs.23361 NM_145804 ENSG00000166016 ABTB2 ABTB2A|BTBD22 ankyrin repeat and BTB domain containing 2 protein-coding chr3-785 chr3 149657764 149658008 + 16.9 0.000 promoter-TSS (NR_040250) promoter-TSS (NR_040250) 139 NM_001168280 25937 Hs.477921 NM_015472 ENSG00000018408 WWTR1 TAZ WW domain containing transcription regulator 1 protein-coding chr8-785 chr8 131904099 131904343 + 16.9 0.000 non-coding (NR_136615, exon 1 of 24) non-coding (NR_136615, exon 1 of 24) 128 NM_001323555 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding chr9-1177 chr9 14554873 14555117 + 16.9 0.000 Intergenic Intergenic -22918 NM_001369458 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding chr15-682 chr15 70748448 70748692 + 16.9 0.000 intron (NM_018003, intron 1 of 18) intron (NM_018003, intron 1 of 18) 14988 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr19-485 chr19 5673471 5673715 + 16.9 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat 6645 NM_001365761 125988 Hs.356626 NM_205767 ENSG00000174917 MICOS13 C19orf70|MIC13|P117|QIL1 mitochondrial contact site and cristae organizing system subunit 13 protein-coding chr21-108 chr21 44818164 44818408 + 16.9 0.000 promoter-TSS (NM_001286416) promoter-TSS (NM_001286416) -157 NM_001286416 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr1-2299 chr1 25515083 25515327 + 16.9 0.000 Intergenic L2a|LINE|L2 -28380 NM_015627 26119 Hs.590911 NM_015627 ENSG00000157978 LDLRAP1 ARH|ARH1|ARH2|FHCB1|FHCB2 low density lipoprotein receptor adaptor protein 1 protein-coding chr4-1060 chr4 124904113 124904357 + 16.9 0.000 Intergenic Intergenic -191503 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr2-1999 chr2 241224783 241225027 + 16.9 0.000 3' UTR (NM_001370694, exon 25 of 25) 3' UTR (NM_001370694, exon 25 of 25) 36228 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr8-729 chr8 22646230 22646474 + 16.9 0.000 intron (NM_018688, intron 1 of 8) intron (NM_018688, intron 1 of 8) -4143 NR_027715 80094 Hs.675917 NM_025026 BIN3-IT1 - BIN3 intronic transcript 1 ncRNA chr2-1200 chr2 18599887 18600131 + 16.9 0.000 Intergenic Intergenic -10429 NM_001199104 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding chr5-422 chr5 126002466 126002710 + 16.9 0.000 Intergenic Intergenic -176989 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA chr1-2667 chr1 229272319 229272563 + 16.9 0.000 intron (NM_001271998, intron 1 of 5) L2a|LINE|L2 -1287 NR_149312 105373159 NR_149312 LOC105373159 - uncharacterized LOC105373159 ncRNA chr12-422 chr12 68933150 68933394 + 16.9 0.000 promoter-TSS (NM_001005502) promoter-TSS (NM_001005502) -73 NM_001005502 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr9-876 chr9 35036456 35036700 + 16.9 0.000 Intergenic Intergenic -4517 NM_001040411 138724 Hs.148250 NM_203299 ENSG00000174038 C9orf131 - chromosome 9 open reading frame 131 protein-coding chr3-1131 chr3 60743550 60743794 + 16.9 0.000 intron (NR_148921, intron 4 of 4) intron (NR_148921, intron 4 of 4) -125802 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA chr8-677 chr8 117920601 117920845 + 16.9 0.000 TTS (NR_145799) TTS (NR_145799) 190 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA chr2-2006 chr2 241720199 241720443 + 16.9 0.000 3' UTR (NM_001330161, exon 8 of 8) 3' UTR (NM_001330161, exon 8 of 8) -14309 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr11-1403 chr11 3231014 3231258 + 16.9 0.000 intron (NM_001039165, intron 1 of 1) intron (NM_001039165, intron 1 of 1) 1281 NM_001039165 116534 Hs.745512 NM_001039165 ENSG00000184350 MRGPRE GPR167|MGRF|MRGE MAS related GPR family member E protein-coding chr6-985 chr6 44058097 44058341 + 16.9 0.000 intron (NR_125864, intron 1 of 4) L2c|LINE|L2 16433 NR_125864 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr12-703 chr12 124335914 124336158 + 16.9 0.000 intron (NM_001077261, intron 39 of 47) intron (NM_001077261, intron 39 of 47) 1206 NR_106940 102466204 NR_106940 ENSG00000275967 MIR6880 hsa-mir-6880 microRNA 6880 ncRNA chr14-703 chr14 52068290 52068534 + 16.9 0.000 intron (NM_007361, intron 1 of 21) CpG 647 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding chr22-682 chr22 37916586 37916830 + 16.9 0.000 intron (NM_033386, intron 3 of 15) intron (NM_033386, intron 3 of 15) 10411 NM_033386 85377 Hs.517610 NM_033386 ENSG00000100139 MICALL1 MICAL-L1|MIRAB13 MICAL like 1 protein-coding chr3-664 chr3 73786728 73786972 + 16.9 0.000 Intergenic Intergenic -22394 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr6-516 chr6 47242550 47242794 + 16.9 0.000 intron (NM_014452, intron 4 of 5) intron (NM_014452, intron 4 of 5) 67233 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding chr6-989 chr6 46271444 46271688 + 16.9 0.000 intron (NM_001251973, intron 2 of 4) intron (NM_001251973, intron 2 of 4) -4758 NR_125838 101926915 Hs.575377 NR_125838 LOC101926915 - uncharacterized LOC101926915 ncRNA chr4-1050 chr4 113959292 113959536 + 16.9 0.000 intron (NM_001354211, intron 4 of 6) intron (NM_001354211, intron 4 of 6) 20233 NM_024590 79642 Hs.22895 NM_024590 ENSG00000180801 ARSJ ASJ arylsulfatase family member J protein-coding chr10-742 chr10 79669203 79669447 + 16.9 0.000 Intergenic Intergenic -6140 NR_134315 105378385 Hs.737310 NR_134315 ENSG00000226676 LINC02679 - long intergenic non-protein coding RNA 2679 ncRNA chr1-2329 chr1 32984575 32984819 + 16.9 0.000 Intergenic MIR3|SINE|MIR -19888 NM_153341 127544 Hs.591504 NM_153341 ENSG00000116514 RNF19B IBRDC3|NKLAM ring finger protein 19B protein-coding chr19-972 chr19 29666833 29667077 + 16.9 0.000 intron (NM_024310, intron 1 of 1) intron (NM_024310, intron 1 of 1) 1494 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr17-258 chr17 7704922 7705166 + 16.9 0.000 promoter-TSS (NM_001406) promoter-TSS (NM_001406) -158 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr6-1017 chr6 75782042 75782286 + 16.9 0.000 intron (NM_001368139, intron 2 of 9) intron (NM_001368139, intron 2 of 9) 32925 NM_001368138 4646 Hs.149387 NM_004999 ENSG00000196586 MYO6 DFNA22|DFNB37 myosin VI protein-coding chr9-1392 chr9 134730737 134730981 + 16.9 0.000 intron (NM_001278074, intron 7 of 65) intron (NM_001278074, intron 7 of 65) -78016 NR_138049 414316 Hs.571561 NR_138049 ENSG00000204011 COL5A1-AS1 C9orf104|bA54A22.4 COL5A1 antisense RNA 1 ncRNA chr18-328 chr18 38563475 38563719 + 16.9 0.000 Intergenic Intergenic 906462 NR_036202 100422857 NR_036202 ENSG00000266530 MIR4318 - microRNA 4318 ncRNA chr1-802 chr1 1858956 1859200 + 16.9 0.000 intron (NM_001282538, intron 1 of 9) AluSz|SINE|Alu 32009 NM_002074 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr9-1090 chr9 97412689 97412933 + 16.9 0.000 intron (NM_001302884, intron 1 of 15) intron (NM_001302884, intron 1 of 15) 715 NM_014290 23424 Hs.193842 NM_014290 ENSG00000196116 TDRD7 CATC4|PCTAIRE2BP|TRAP tudor domain containing 7 protein-coding chr19-1623 chr19 44715528 44715772 + 16.9 0.000 Intergenic MSTA|LTR|ERVL-MaLR 16499 NM_001039213 388551 Hs.456381 NM_001039213 ENSG00000213892 CEACAM16 CEAL2|DFNA4B|DFNB113 carcinoembryonic antigen related cell adhesion molecule 16 protein-coding chr19-1342 chr19 11735633 11735877 + 16.9 0.000 intron (NM_001080493, intron 1 of 3) intron (NM_001080493, intron 1 of 3) 3191 NM_001297610 55552 Hs.142167 NM_017507 ENSG00000197933 ZNF823 HSZFP36 zinc finger protein 823 protein-coding chr17-889 chr17 77394804 77395048 + 16.9 0.000 intron (NM_001113494, intron 1 of 10) intron (NM_001113494, intron 1 of 10) 2128 NR_036200 100422851 NR_036200 ENSG00000264060 MIR4316 - microRNA 4316 ncRNA chr6-974 chr6 42963368 42963612 + 16.9 0.000 TTS (NR_133009) TTS (NR_133009) 2736 NM_018960 27232 Hs.144914 NM_018960 ENSG00000124713 GNMT HEL-S-182mP glycine N-methyltransferase protein-coding chr12-1233 chr12 116319864 116320108 + 16.9 0.000 Intergenic Intergenic -42800 NM_015335 23389 Hs.603766 NM_015335 ENSG00000123066 MED13L MRFACD|PROSIT240|THRAP2|TRAP240L mediator complex subunit 13L protein-coding chr15-141 chr15 62390339 62390583 + 16.9 0.000 Intergenic (GCCGC)n|Simple_repeat|Simple_repeat 47432 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr9-1351 chr9 129879009 129879253 + 16.9 0.000 intron (NM_001008563, intron 23 of 25) MIR|SINE|MIR 9526 NR_106914 102466750 NR_106914 ENSG00000276124 MIR6855 hsa-mir-6855 microRNA 6855 ncRNA chr8-970 chr8 132991557 132991801 + 16.9 0.000 intron (NM_003235, intron 35 of 47) intron (NM_003235, intron 35 of 47) 54902 NR_107002 102466865 NR_107002 ENSG00000276961 MIR7848 hsa-mir-7848 microRNA 7848 ncRNA chr1-1730 chr1 36123782 36124026 + 16.9 0.000 intron (NM_005202, intron 1 of 3) intron (NM_005202, intron 1 of 3) 1318 NM_001294347 1296 Hs.353001 NM_005202 ENSG00000171812 COL8A2 FECD|FECD1|PPCD|PPCD2 collagen type VIII alpha 2 chain protein-coding chr12-1114 chr12 53080759 53081003 + 16.9 0.000 Intergenic Intergenic -1491 NM_032840 84926 Hs.343334 NM_032840 ENSG00000167778 SPRYD3 - SPRY domain containing 3 protein-coding chr15-201 chr15 65185308 65185552 + 16.9 0.000 promoter-TSS (NR_133680) promoter-TSS (NR_133680) -88 NR_133680 10845 Hs.113823 NM_006660 ENSG00000166855 CLPX EPP2 caseinolytic mitochondrial matrix peptidase chaperone subunit protein-coding chr20-150 chr20 63534472 63534716 + 16.9 0.000 intron (NM_001256358, intron 1 of 6) intron (NM_001256358, intron 1 of 6) 2776 NM_001256358 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr7-633 chr7 66518245 66518489 + 16.9 0.000 Intergenic Intergenic 24676 NR_134572 100289098 Hs.662276 NR_134570 ENSG00000237310 GS1-124K5.4 - uncharacterized LOC100289098 ncRNA chr14-560 chr14 74614885 74615129 + 16.9 0.000 Intergenic LTR78B|LTR|ERV1 -2770 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr4-531 chr4 83267532 83267776 + 16.9 0.000 exon (NM_001358921, exon 6 of 7) exon (NM_001358921, exon 6 of 7) 17141 NM_001358921 27235 Hs.144304 NM_015697 ENSG00000173085 COQ2 CL640|COQ10D1|MSA1|PHB:PPT coenzyme Q2, polyprenyltransferase protein-coding chr1-1766 chr1 54542257 54542501 + 16.9 0.000 Intergenic CpG -5849 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr22-542 chr22 47124085 47124329 + 16.9 0.000 intron (NM_001284305, intron 12 of 12) intron (NM_001284305, intron 12 of 12) -208165 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr13-273 chr13 112943831 112944075 + 16.9 0.000 Intergenic CpG 24685 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr1-1606 chr1 918669 918913 + 16.9 0.000 intron (NR_026874, intron 2 of 3) intron (NR_026874, intron 2 of 3) 901 NR_026874 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr6-365 chr6 155273474 155273718 + 16.9 0.000 intron (NM_001001346, intron 1 of 1) intron (NM_001001346, intron 1 of 1) 9583 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr1-1025 chr1 47976892 47977136 + 16.9 0.000 intron (NM_001194986, intron 2 of 6) L1MD2|LINE|L1 20371 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr2-1081 chr2 42092121 42092365 + 16.9 0.000 Intergenic LTR40a|LTR|ERVL 44222 NM_138370 91461 Hs.408542 NM_138370 ENSG00000162878 PKDCC SGK493|Vlk protein kinase domain containing, cytoplasmic protein-coding chr18-301 chr18 10632614 10632858 + 16.9 0.000 Intergenic Intergenic -6316 NR_146509 102724470 NR_146509 LINC01887 - long intergenic non-protein coding RNA 1887 ncRNA chr7-1170 chr7 559253 559497 + 16.9 0.000 intron (NM_001164760, intron 9 of 10) intron (NM_001164760, intron 9 of 10) -2583 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr8-503 chr8 80171100 80171344 + 16.9 0.000 promoter-TSS (NR_105036) promoter-TSS (NR_105036) -22 NR_105036 7163 Hs.368433 NM_005079 ENSG00000076554 TPD52 D52|N8L|PC-1|PrLZ|hD52 tumor protein D52 protein-coding chr6-433 chr6 153185456 153185700 + 16.9 0.000 Intergenic L1MA6|LINE|L1 -54296 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr2-1056 chr2 240766843 240767087 + 16.9 0.000 exon (NM_001244008, exon 19 of 49) exon (NM_001244008, exon 19 of 49) 53254 NM_001330289 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr2-1359 chr2 200600658 200600902 + 16.9 0.000 intron (NM_001159, intron 5 of 34) intron (NM_001159, intron 5 of 34) 14766 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding chr1-2439 chr1 91537335 91537579 + 16.9 0.000 Intergenic Intergenic 36349 NM_001134420 8317 Hs.533573 NM_003503 ENSG00000097046 CDC7 CDC7L1|HsCDC7|Hsk1|huCDC7 cell division cycle 7 protein-coding chr16-259 chr16 57539211 57539455 + 16.9 0.000 Intergenic L1MB3|LINE|L1 -2762 NM_033212 92922 Hs.644611 NM_033212 ENSG00000135736 CCDC102A - coiled-coil domain containing 102A protein-coding chr2-1858 chr2 164898545 164898789 + 16.9 0.000 exon (NM_001351537, exon 12 of 12) exon (NM_001351537, exon 12 of 12) -56591 NM_001365670 22837 Hs.470457 NM_014900 ENSG00000082438 COBLL1 COBLR1 cordon-bleu WH2 repeat protein like 1 protein-coding chr10-1149 chr10 47297523 47297767 + 16.9 0.000 Intergenic Intergenic -2552 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding chr22-458 chr22 45867410 45867654 + 16.9 0.000 Intergenic CpG 107008 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA chr3-978 chr3 67930560 67930804 + 16.9 0.000 intron (NR_109992, intron 6 of 6) MER11A|LTR|ERVK -60910 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding chrX-230 chrX 151825979 151826223 + 16.9 0.000 Intergenic Intergenic 84982 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr6-256 chr6 111259092 111259336 + 16.9 0.000 promoter-TSS (NM_153369) promoter-TSS (NM_153369) -125 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr1-2414 chr1 76279086 76279330 + 16.9 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 204462 NR_146056 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr16-1112 chr16 50603610 50603854 + 16.9 0.000 intron (NM_033119, intron 3 of 9) intron (NM_033119, intron 3 of 9) 55336 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr10-655 chr10 79483984 79484228 + 16.9 0.000 Intergenic Intergenic 26876 NR_136625 729815 Hs.564060 NR_136624 ENSG00000235705 LOC729815 - uncharacterized LOC729815 ncRNA chr15-756 chr15 100879879 100880123 + 16.9 0.000 exon (NM_001293815, exon 1 of 10) exon (NM_001293815, exon 1 of 10) 170 NM_001293815 220 Hs.459538 NM_000693 ENSG00000184254 ALDH1A3 ALDH1A6|ALDH6|MCOP8|RALDH3 aldehyde dehydrogenase 1 family member A3 protein-coding chr3-1326 chr3 63578111 63578355 + 16.9 0.000 intron (NM_001130003, intron 4 of 5) MIR|SINE|MIR -28182 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA chr12-766 chr12 102062094 102062338 + 16.9 0.000 promoter-TSS (NM_001301107) promoter-TSS (NM_001301107) -92 NM_001301107 51019 Hs.405692 NM_016053 ENSG00000120860 WASHC3 CCDC53|CGI-116 WASH complex subunit 3 protein-coding chr18-314 chr18 22695046 22695290 + 16.9 0.000 Intergenic MIRb|SINE|MIR 91669 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA chr1-2317 chr1 29631760 29632004 + 16.9 0.000 Intergenic MER102a|DNA|hAT-Charlie -281768 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA chr9-1087 chr9 94973519 94973763 + 16.9 0.000 intron (NM_032823, intron 8 of 14) intron (NM_032823, intron 8 of 14) -28087 NR_147613 101928119 Hs.630906 NR_147613 LOC101928119 - uncharacterized LOC101928119 ncRNA chr9-1363 chr9 131013595 131013839 + 16.9 0.000 intron (NM_006059, intron 1 of 27) L2b|LINE|L2 4543 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr9-1249 chr9 91993011 91993255 + 16.9 0.000 Intergenic Intergenic -42905 NM_004560 4920 Hs.98255 NM_004560 ENSG00000169071 ROR2 BDB|BDB1|NTRKR2 receptor tyrosine kinase like orphan receptor 2 protein-coding chr16-623 chr16 2974601 2974845 + 16.9 0.000 intron (NM_182687, intron 4 of 8) intron (NM_182687, intron 4 of 8) 5375 NM_001284512 124222 Hs.351474 NM_152341 ENSG00000162073 PAQR4 - progestin and adipoQ receptor family member 4 protein-coding chr7-606 chr7 930955 931199 + 16.9 0.000 intron (NM_006869, intron 2 of 10) GA-rich|Low_complexity|Low_complexity -3861 NM_001284310 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr1-2073 chr1 155126097 155126341 + 16.9 0.000 Intergenic CpG -1657 NM_004428 1942 Hs.516664 NM_004428 ENSG00000169242 EFNA1 B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4 ephrin A1 protein-coding chr12-1073 chr12 27595274 27595518 + 16.9 0.000 intron (NM_001198915, intron 2 of 26) intron (NM_001198915, intron 2 of 26) 71190 NM_001198915 8496 Hs.172445 NM_003622 ENSG00000110841 PPFIBP1 L2|SGT2|hSGT2|hSgt2p PPFIA binding protein 1 protein-coding chr19-1602 chr19 39166816 39167060 + 16.9 0.000 intron (NM_001014834, intron 1 of 7) intron (NM_001014834, intron 1 of 7) -30026 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr8-985 chr8 141737375 141737619 + 16.9 0.000 Intergenic Intergenic 48816 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr17-1346 chr17 57305926 57306170 + 16.9 0.000 intron (NM_001322250, intron 5 of 13) L2a|LINE|L2 49029 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding chr10-1292 chr10 118594653 118594897 + 16.9 0.000 exon (NM_004248, exon 2 of 2) exon (NM_004248, exon 2 of 2) 873 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr3-639 chr3 196198547 196198791 + 16.9 0.000 intron (NR_135618, intron 6 of 7) intron (NR_135618, intron 6 of 7) 12731 NM_001039617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr3-693 chr3 4583546 4583790 + 16.9 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 90320 NM_001168272 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr11-764 chr11 108552063 108552307 + 16.9 0.000 promoter-TSS (NM_001144763) promoter-TSS (NM_001144763) 44 NM_001144763 23086 Hs.28540 NM_015065 ENSG00000110723 EXPH5 SLAC2-B|SLAC2B exophilin 5 protein-coding chr5-837 chr5 172040210 172040454 + 16.9 0.000 Intergenic Intergenic -33459 NM_033644 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr11-573 chr11 65400655 65400899 + 16.9 0.000 exon (NM_001300833, exon 8 of 10) exon (NM_001300833, exon 8 of 10) 14140 NM_001300832 83786 Hs.578433 NM_031904 ENSG00000126391 FRMD8 FKSG44|iTAP FERM domain containing 8 protein-coding chr11-1291 chr11 58914850 58915094 + 16.9 0.000 intron (NM_001354699, intron 2 of 7) intron (NM_001354699, intron 2 of 7) 9574 NM_001354699 92292 Hs.38085 NM_080661 ENSG00000166840 GLYATL1 GATF-C|GNAT glycine-N-acyltransferase like 1 protein-coding chr19-1074 chr19 12965198 12965442 + 16.9 0.000 Intergenic L2|LINE|L2 -4298 NM_152654 199699 Hs.331981 NM_152654 ENSG00000179284 DAND5 CER2|CERL2|CKTSF1B3|COCO|CRL2|DANTE|GREM3|SP1 DAN domain BMP antagonist family member 5 protein-coding chr4-1096 chr4 162632996 162633240 + 16.9 0.000 Intergenic AluJo|SINE|Alu 460510 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr9-480 chr9 93451088 93451332 + 16.9 0.000 promoter-TSS (NM_014612) promoter-TSS (NM_014612) 398 NR_136232 158293 Hs.350364 NM_198841 ENSG00000188938 FAM120AOS C9orf10OS family with sequence similarity 120A opposite strand protein-coding chr1-2551 chr1 167456714 167456958 + 16.9 0.000 intron (NM_000734, intron 1 of 7) intron (NM_000734, intron 1 of 7) 61693 NM_000734 919 Hs.156445 NM_000734 ENSG00000198821 CD247 CD3-ZETA|CD3H|CD3Q|CD3Z|IMD25|T3Z|TCRZ CD247 molecule protein-coding chr1-530 chr1 2902456 2902700 + 16.9 0.000 Intergenic Intergenic -101710 NM_001242672 100287898 Hs.632363 NM_001242672 ENSG00000215912 TTC34 - tetratricopeptide repeat domain 34 protein-coding chr1-2384 chr1 52681114 52681358 + 16.9 0.000 Intergenic Intergenic 17111 NM_023077 65260 Hs.349905 NM_023077 ENSG00000162377 COA7 C1orf163|RESA1|SCAN3|SELRC1 cytochrome c oxidase assembly factor 7 (putative) protein-coding chr3-918 chr3 8996701 8996945 + 16.9 0.000 intron (NM_014850, intron 18 of 21) intron (NM_014850, intron 18 of 21) -33351 NM_020165 56852 Hs.375684 NM_020165 ENSG00000070950 RAD18 RNF73 RAD18 E3 ubiquitin protein ligase protein-coding chr10-1163 chr10 62475412 62475656 + 16.9 0.000 intron (NM_199451, intron 4 of 7) intron (NM_199451, intron 4 of 7) -44914 NM_199452 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding chr19-1020 chr19 51313284 51313528 + 16.9 0.000 intron (NM_001101372, intron 1 of 7) intron (NM_001101372, intron 1 of 7) 1558 NM_001101372 402665 NM_001101372 ENSG00000142549 IGLON5 - IgLON family member 5 protein-coding chr20-614 chr20 46558470 46558714 + 16.9 0.000 3' UTR (NM_022829, exon 13 of 13) 3' UTR (NM_022829, exon 13 of 13) -7938 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding chr7-1151 chr7 125917370 125917614 + 16.9 0.000 Intergenic AluSg7|SINE|Alu -653201 NR_110182 101928254 Hs.571236 NR_110182 ENSG00000219445 LOC101928254 - uncharacterized LOC101928254 ncRNA chr19-1431 chr19 1618214 1618458 + 16.9 0.000 intron (NM_001136139, intron 16 of 19) L2a|LINE|L2 -12874 NM_006830 10975 Hs.8372 NM_006830 ENSG00000127540 UQCR11 0710008D09Rik|QCR10|UQCR ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding chr8-303 chr8 102806524 102806768 + 16.9 0.000 promoter-TSS (NR_149020) promoter-TSS (NR_149020) -176 NR_149020 401472 NR_149020 GASAL1 GASL1 growth arrest associated lncRNA 1 ncRNA chr4-458 chr4 53366030 53366274 + 16.9 0.000 promoter-TSS (NM_152540) promoter-TSS (NM_152540) -91 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr16-643 chr16 29996037 29996281 + 16.9 0.000 promoter-TSS (NR_134855) promoter-TSS (NR_134855) -63 NM_001197323 8479 Hs.567370 NM_003609 ENSG00000149929 HIRIP3 - HIRA interacting protein 3 protein-coding chr16-499 chr16 89828504 89828748 + 16.9 0.000 exon (NM_032451, exon 1 of 15) exon (NM_032451, exon 1 of 15) 151 NM_032451 84501 Hs.461786 NM_032451 ENSG00000204991 SPIRE2 Spir-2 spire type actin nucleation factor 2 protein-coding chr9-1400 chr9 135890795 135891039 + 16.9 0.000 intron (NM_015447, intron 1 of 16) L1MEf|LINE|L1 16629 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding chr7-854 chr7 128459350 128459594 + 16.9 0.000 Intergenic Intergenic 3594 NM_013332 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr10-1209 chr10 80351669 80351913 + 16.9 0.000 intron (NM_001270042, intron 1 of 3) intron (NM_001270042, intron 1 of 3) 4964 NM_001370156 143241 Hs.407751 NM_138812 ENSG00000170788 DYDC1 DPY30D1 DPY30 domain containing 1 protein-coding chr1-2626 chr1 206976365 206976609 + 16.9 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -5862 NM_032029 83953 Hs.145519 NM_032029 ENSG00000162897 FCAMR CD351|FCA/MR|FKSG87 Fc fragment of IgA and IgM receptor protein-coding chr15-279 chr15 41972270 41972514 + 16.9 0.000 promoter-TSS (NR_120334) promoter-TSS (NR_120334) 165 NM_139265 30844 Hs.143703 NM_139265 ENSG00000103966 EHD4 PAST4 EH domain containing 4 protein-coding chr1-1600 chr1 234970676 234970920 + 16.9 0.000 Intergenic Intergenic -6799 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr11-1641 chr11 115301080 115301324 + 16.9 0.000 intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) -32375 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr6-1011 chr6 75204288 75204532 + 16.9 0.000 intron (NM_080645, intron 1 of 50) intron (NM_080645, intron 1 of 50) 1643 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr16-1054 chr16 3946003 3946247 + 16.9 0.000 Intergenic AluJo|SINE|Alu 4319 NR_120311 102724927 Hs.364739 NR_120311 ENSG00000262185 LOC102724927 - uncharacterized LOC102724927 ncRNA chr8-502 chr8 74119885 74120129 + 16.9 0.000 Intergenic Intergenic 128615 NM_015364 23643 Hs.726603 NM_015364 ENSG00000154589 LY96 ESOP-1|MD-2|MD2|ly-96 lymphocyte antigen 96 protein-coding chr12-1219 chr12 109653274 109653518 + 16.9 0.000 Intergenic MIRc|SINE|MIR -60429 NM_032829 84915 Hs.661785 NM_032829 ENSG00000139438 FAM222A C12orf34 family with sequence similarity 222 member A protein-coding chr17-896 chr17 80594862 80595106 + 16.9 0.000 intron (NM_020761, intron 1 of 33) GA-rich|Low_complexity|Low_complexity 50146 NM_001163034 57521 Hs.133044 NM_020761 ENSG00000141564 RPTOR KOG1|Mip1 regulatory associated protein of MTOR complex 1 protein-coding chr20-310 chr20 326323 326567 + 16.9 0.000 exon (NM_006943, exon 1 of 1) exon (NM_006943, exon 1 of 1) 874 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box transcription factor 12 protein-coding chr13-426 chr13 20526684 20526928 + 16.9 0.000 promoter-TSS (NM_015974) promoter-TSS (NM_015974) -933 NM_001363647 51084 Hs.370703 NM_015974 ENSG00000165475 CRYL1 GDH|HEL30|gul3DH|lambda-CRY crystallin lambda 1 protein-coding chr6-1012 chr6 75275505 75275749 + 16.9 0.000 intron (NM_018247, intron 1 of 6) L2a|LINE|L2 9165 NM_001143958 55754 Hs.108530 NM_018247 ENSG00000112697 TMEM30A C6orf67|CDC50A transmembrane protein 30A protein-coding chr6-744 chr6 149863824 149864068 + 16.9 0.000 exon (NM_032832, exon 1 of 7) exon (NM_032832, exon 1 of 7) 413 NM_032832 84918 Hs.408355 NM_032832 ENSG00000120256 LRP11 MANSC3|bA350J20.3 LDL receptor related protein 11 protein-coding chr7-338 chr7 1994409 1994653 + 16.8 0.000 intron (NM_001013837, intron 14 of 18) intron (NM_001013837, intron 14 of 18) -53960 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr19-917 chr19 3537206 3537450 + 16.8 0.000 TTS (NM_001136197) TTS (NM_001136197) -1829 NM_001135580 100128569 Hs.664978 NM_001135580 ENSG00000183397 C19orf71 - chromosome 19 open reading frame 71 protein-coding chr4-473 chr4 127162971 127163215 + 16.8 0.000 Intergenic Intergenic -469864 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr2-1449 chr2 27072653 27072897 + 16.8 0.000 Intergenic Intergenic -1121 NM_001134693 100128731 Hs.502948 NM_001134693 ENSG00000228474 OST4 - oligosaccharyltransferase complex subunit 4, non-catalytic protein-coding chr22-733 chr22 46303779 46304023 + 16.8 0.000 intron (NM_016426, intron 2 of 11) MLT1I|LTR|ERVL-MaLR 7031 NM_016426 51512 Hs.386189 NM_016426 ENSG00000075218 GTSE1 B99 G2 and S-phase expressed 1 protein-coding chr20-476 chr20 23920013 23920257 + 16.8 0.000 Intergenic Intergenic -40387 NM_001900 1473 Hs.121489 NM_001900 ENSG00000170367 CST5 - cystatin D protein-coding chr1-1977 chr1 2436645 2436889 + 16.8 0.000 Intergenic Intergenic -24196 NM_002617 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr2-1808 chr2 121224976 121225220 + 16.8 0.000 intron (NM_014553, intron 14 of 14) intron (NM_014553, intron 14 of 14) 60104 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr1-1243 chr1 1298192 1298436 + 16.8 0.000 intron (NM_030649, intron 12 of 23) intron (NM_030649, intron 12 of 23) -2144 NR_106784 102465434 NR_106784 ENSG00000278073 MIR6726 hsa-mir-6726 microRNA 6726 ncRNA chr1-1965 chr1 1026491 1026735 + 16.8 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) 6493 NM_001305275 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr17-852 chr17 32341558 32341802 + 16.8 0.000 intron (NM_022344, intron 1 of 9) intron (NM_022344, intron 1 of 9) 493 NM_022344 64149 Hs.655257 NM_022344 ENSG00000108666 C17orf75 NJMU-R1|SRI2 chromosome 17 open reading frame 75 protein-coding chr2-1834 chr2 144358063 144358307 + 16.8 0.000 Intergenic Intergenic -25116 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding GL000225.1-48 GL000225.1 1227 1471 + 16.8 0.000 NA NA NA NA chr6-973 chr6 42339377 42339621 + 16.8 0.000 intron (NM_001297573, intron 3 of 17) intron (NM_001297573, intron 3 of 17) 112552 NM_001297573 55809 Hs.485392 NM_018415 ENSG00000124496 TRERF1 BCAR2|HSA277276|RAPA|TREP132|TReP-132|dJ139D8.5 transcriptional regulating factor 1 protein-coding chr1-1120 chr1 1003083 1003327 + 16.8 0.000 Intergenic Intergenic -3108 NM_001142467 57801 Hs.154029 NM_021170 ENSG00000188290 HES4 bHLHb42 hes family bHLH transcription factor 4 protein-coding chr20-564 chr20 30816311 30816555 + 16.8 0.000 Intergenic CpG -412971 NR_045115 140678 Hs.653099 NR_045115 MLLT10P1 MLLT10L|bA348I14.3 MLLT10 pseudogene 1 pseudo chr2-1129 chr2 152962293 152962537 + 16.8 0.000 Intergenic (AATT)n|Simple_repeat|Simple_repeat 243778 NR_146431 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr2-1525 chr2 160214577 160214821 + 16.8 0.000 Intergenic Intergenic -14386 NM_001282354 3694 Hs.470399 NM_000888 ENSG00000115221 ITGB6 AI1H integrin subunit beta 6 protein-coding chr13-308 chr13 25114221 25114465 + 16.8 0.000 Intergenic Intergenic 18205 NM_030979 5042 Hs.458280 NM_030979 ENSG00000151846 PABPC3 PABP3|PABPL3|tPABP poly(A) binding protein cytoplasmic 3 protein-coding chr20-642 chr20 58047051 58047295 + 16.8 0.000 Intergenic Intergenic 43269 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA chr16-654 chr16 65122953 65123197 + 16.8 0.000 Intergenic CpG-9789 -1012 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr22-329 chr22 37197167 37197411 + 16.8 0.000 intron (NM_001365878, intron 2 of 4) intron (NM_001365878, intron 2 of 4) 2134 NM_001365878 114904 Hs.22011 NM_031910 ENSG00000133466 C1QTNF6 CTFP6|CTRP6|ZACRP6 C1q and TNF related 6 protein-coding chr5-1037 chr5 56711290 56711534 + 16.8 0.000 Intergenic L1PA16|LINE|L1 61459 NM_001365184 105378979 NM_001365184 LOC105378979 - growth/differentiation factor 3 protein-coding chr14-687 chr14 32935103 32935347 + 16.8 0.000 Intergenic Intergenic -3654 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr5-1186 chr5 177129329 177129573 + 16.8 0.000 Intergenic Intergenic -3628 NM_172349 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr17-1143 chr17 44308268 44308512 + 16.8 0.000 promoter-TSS (NR_110802) promoter-TSS (NR_110802) 41 NR_110802 101926996 Hs.666688 NR_110802 RUNDC3A-AS1 - RUNDC3A antisense RNA 1 ncRNA GL000225.1-24 GL000225.1 129189 129433 + 16.8 0.000 NA NA NA NA chr1-1487 chr1 11977796 11978040 + 16.8 0.000 Intergenic Intergenic -2263 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr18-267 chr18 23259923 23260167 + 16.8 0.000 non-coding (NR_023359, exon 7 of 7) non-coding (NR_023359, exon 7 of 7) 104220 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr10-399 chr10 43397256 43397500 + 16.8 0.000 promoter-TSS (NM_001098207) promoter-TSS (NM_001098207) -32 NM_001098207 3185 Hs.808 NM_004966 ENSG00000169813 HNRNPF HNRPF|OK/SW-cl.23|mcs94-1 heterogeneous nuclear ribonucleoprotein F protein-coding chr1-1407 chr1 160019100 160019344 + 16.8 0.000 Intergenic Intergenic 12768 NM_145167 93183 Hs.552810 NM_145167 ENSG00000143315 PIGM GPI-MT-I phosphatidylinositol glycan anchor biosynthesis class M protein-coding chr22-363 chr22 50487455 50487699 + 16.8 0.000 intron (NM_017584, intron 2 of 9) intron (NM_017584, intron 2 of 9) 718 NM_017584 55586 Hs.129227 NM_017584 ENSG00000100253 MIOX ALDRL6 myo-inositol oxygenase protein-coding chr1-2134 chr1 228275192 228275436 + 16.8 0.000 intron (NM_052843, intron 20 of 80) intron (NM_052843, intron 20 of 80) -61650 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr6-1099 chr6 153002835 153003079 + 16.8 0.000 promoter-TSS (NM_019041) promoter-TSS (NM_019041) -142 NM_001301872 54516 Hs.225836 NM_019041 ENSG00000112031 MTRF1L HMRF1L|MRF1L|mtRF1a mitochondrial translational release factor 1 like protein-coding chr9-856 chr9 17017896 17018140 + 16.8 0.000 Intergenic Intergenic -117022 NM_001365029 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding chr19-1080 chr19 18668728 18668972 + 16.8 0.000 exon (NM_001345982, exon 4 of 4) exon (NM_001345982, exon 4 of 4) -14830 NM_001098482 23373 Hs.371096 NM_015321 ENSG00000105662 CRTC1 MAML2|MECT1|Mam-2|TORC-1|TORC1|WAMTP1 CREB regulated transcription coactivator 1 protein-coding chr4-152 chr4 3532263 3532507 + 16.8 0.000 promoter-TSS (NR_110005) promoter-TSS (NR_110005) 37 NM_002337 4043 Hs.40966 NM_002337 ENSG00000163956 LRPAP1 A2MRAP|A2RAP|HBP44|MRAP|MYP23|RAP|alpha-2-MRAP LDL receptor related protein associated protein 1 protein-coding chr17-1331 chr17 47745061 47745305 + 16.8 0.000 exon (NM_013351, exon 6 of 6) exon (NM_013351, exon 6 of 6) 11947 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr5-1172 chr5 169626916 169627160 + 16.8 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -10237 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding chr19-763 chr19 47227988 47228232 + 16.8 0.000 intron (NM_001127241, intron 1 of 2) intron (NM_001127241, intron 1 of 2) -1091 NR_036159 100422832 NR_036159 ENSG00000284411 MIR3191 mir-3191 microRNA 3191 ncRNA chr17-606 chr17 28902798 28903042 + 16.8 0.000 exon (NM_144683, exon 1 of 5) exon (NM_144683, exon 1 of 5) 159 NM_144683 147015 Hs.631760 NM_144683 ENSG00000167536 DHRS13 SDR7C5 dehydrogenase/reductase 13 protein-coding chr6-1055 chr6 119426570 119426814 + 16.8 0.000 Intergenic Intergenic 64610 NR_046100 285762 Hs.571063 NR_046100 LOC285762 - uncharacterized LOC285762 ncRNA chr20-112 chr20 3932940 3933184 + 16.8 0.000 3' UTR (NM_001134338, exon 7 of 7) 3' UTR (NM_001134338, exon 7 of 7) -15499 NR_031722 100302282 NR_031722 ENSG00000283320 MIR103B2 MIR103-2-AS|MIR103-2AS|MIRN103-2AS|hsa-mir-103-2-as microRNA 103b-2 ncRNA chr6-952 chr6 35726840 35727084 + 16.8 0.000 non-coding (NR_027117, exon 10 of 10) non-coding (NR_027117, exon 10 of 10) 1621 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr5-1053 chr5 72264822 72265066 + 16.8 0.000 intron (NM_001286748, intron 4 of 11) intron (NM_001286748, intron 4 of 11) 55296 NM_015084 23107 Hs.482491 NM_015084 ENSG00000113048 MRPS27 MRP-S27|S27mt mitochondrial ribosomal protein S27 protein-coding chr3-912 chr3 1087206 1087450 + 16.8 0.000 Intergenic Intergenic -5696 NM_001349354 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding chr22-532 chr22 45889717 45889961 + 16.8 0.000 Intergenic CpG 87323 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr17-1227 chr17 6639495 6639739 + 16.8 0.000 intron (NR_147088, intron 1 of 17) intron (NR_147088, intron 1 of 17) 1094 NR_147087 9851 Hs.28070 NM_014804 ENSG00000198920 KIAA0753 MNR|OFIP KIAA0753 protein-coding chr22-326 chr22 36303915 36304159 + 16.8 0.000 exon (NM_002473, exon 19 of 41) exon (NM_002473, exon 19 of 41) -17130 NR_106877 102465491 NR_106877 ENSG00000278420 MIR6819 hsa-mir-6819 microRNA 6819 ncRNA chr20-123 chr20 50995576 50995820 + 16.8 0.000 Intergenic MIR1_Amn|SINE|MIR 27409 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr8-825 chr8 23853928 23854172 + 16.8 0.000 intron (NM_003155, intron 1 of 3) intron (NM_003155, intron 1 of 3) 756 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding chr16-460 chr16 90022484 90022728 + 16.8 0.000 promoter-TSS (NM_001286208) promoter-TSS (NM_001286208) 6 NM_001286208 2622 Hs.431792 NM_001481 ENSG00000141013 GAS8 CILD33|DRC4|GAS11 growth arrest specific 8 protein-coding chrX-122 chrX 49071917 49072161 + 16.8 0.000 intron (NM_007213, intron 2 of 2) CpG 1963 NM_007213 11230 Hs.29595 NM_007213 ENSG00000243279 PRAF2 JM4|Yip6a PRA1 domain family member 2 protein-coding chr9-919 chr9 95168116 95168360 + 16.8 0.000 intron (NM_001243744, intron 6 of 13) intron (NM_001243744, intron 6 of 13) -82144 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr8-824 chr8 23084002 23084246 + 16.8 0.000 promoter-TSS (NR_046173) promoter-TSS (NR_046173) -231 NR_046173 254896 Hs.735240 NR_046173 ENSG00000284948 LOC254896 - uncharacterized LOC254896 ncRNA chrX-193 chrX 18425515 18425759 + 16.8 0.000 promoter-TSS (NM_001323289) promoter-TSS (NM_001323289) 29 NM_001323289 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr1-2029 chr1 43493669 43493913 + 16.8 0.000 Intergenic L1MEb|LINE|L1 -32246 NM_001329138 5792 Hs.272062 NM_002840 ENSG00000142949 PTPRF BNAH2|LAR protein tyrosine phosphatase receptor type F protein-coding chr2-1833 chr2 143083776 143084020 + 16.8 0.000 Intergenic Intergenic -45521 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chr19-1190 chr19 10643738 10643982 + 16.8 0.000 3' UTR (NM_020428, exon 22 of 22) 3' UTR (NM_020428, exon 22 of 22) 10012 NR_024333 147727 Hs.631616 NR_024333 ENSG00000267100 ILF3-DT ILF3-AS1 ILF3 divergent transcript ncRNA chr19-787 chr19 6393805 6394049 + 16.8 0.000 promoter-TSS (NM_002096) promoter-TSS (NM_002096) -763 NM_002096 2962 Hs.68257 NM_002096 ENSG00000125651 GTF2F1 BTF4|RAP74|TF2F1|TFIIF general transcription factor IIF subunit 1 protein-coding chr9-478 chr9 88680111 88680355 + 16.8 0.000 Intergenic Intergenic 65672 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA chr12-1042 chr12 6540181 6540425 + 16.8 0.000 non-coding (NR_036467, exon 10 of 10) non-coding (NR_036467, exon 10 of 10) 5039 NM_001256799 2597 Hs.544577 NM_002046 ENSG00000111640 GAPDH G3PD|GAPD|HEL-S-162eP glyceraldehyde-3-phosphate dehydrogenase protein-coding chr19-1367 chr19 35790434 35790678 + 16.8 0.000 intron (NR_104176, intron 4 of 7) intron (NR_104176, intron 4 of 7) 7353 NR_104176 644050 Hs.651888 NR_104176 ENSG00000225872 LINC01529 - long intergenic non-protein coding RNA 1529 ncRNA chr10-1264 chr10 102816175 102816419 + 16.8 0.000 TTS (NM_017787) TTS (NM_017787) 21116 NM_000102 1586 Hs.438016 NM_000102 ENSG00000148795 CYP17A1 CPT7|CYP17|P450C17|S17AH cytochrome P450 family 17 subfamily A member 1 protein-coding chr20-598 chr20 38748222 38748466 + 16.8 0.000 promoter-TSS (NM_024855) promoter-TSS (NM_024855) -116 NM_024855 79913 Hs.371585 NM_024855 ENSG00000101442 ACTR5 Arp5|INO80M actin related protein 5 protein-coding chr16-849 chr16 69566647 69566891 + 16.8 0.000 promoter-TSS (NR_031719) promoter-TSS (NR_031719) 803 NM_006599 10725 Hs.371987 NM_006599 ENSG00000102908 NFAT5 NF-AT5|NFATL1|NFATZ|OREBP|TONEBP nuclear factor of activated T cells 5 protein-coding chr1-1212 chr1 193058842 193059086 + 16.8 0.000 promoter-TSS (NM_001173525) promoter-TSS (NM_001173525) 396 NR_146931 51377 Hs.145469 NM_015984 ENSG00000116750 UCHL5 CGI-70|INO80R|UCH-L5|UCH37 ubiquitin C-terminal hydrolase L5 protein-coding chr1-1714 chr1 31788104 31788348 + 16.8 0.000 Intergenic Intergenic -23886 NM_001294335 576 Hs.524138 NM_001294335 ENSG00000121753 ADGRB2 BAI2 adhesion G protein-coupled receptor B2 protein-coding chr1-1501 chr1 30888405 30888649 + 16.8 0.000 intron (NM_014654, intron 1 of 4) intron (NM_014654, intron 1 of 4) 20231 NM_014654 9672 Hs.158287 NM_014654 ENSG00000162512 SDC3 SDCN|SYND3 syndecan 3 protein-coding chr12-1224 chr12 111171828 111172072 + 16.8 0.000 intron (NM_001370598, intron 1 of 21) (TGCGTG)n|Simple_repeat|Simple_repeat 71946 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding chr11-641 chr11 118911961 118912205 + 16.8 0.000 Intergenic Intergenic 1375 NR_039713 100616376 NR_039713 ENSG00000264211 MIR4492 mir-4492 microRNA 4492 ncRNA chr22-49 chr22 37019532 37019776 + 16.8 0.000 promoter-TSS (NM_003312) promoter-TSS (NM_003312) 13 NM_001130517 4357 Hs.248267 NM_021126 ENSG00000128309 MPST MST|TST2|TUM1 mercaptopyruvate sulfurtransferase protein-coding chr22-665 chr22 36195028 36195272 + 16.8 0.000 intron (NM_145660, intron 4 of 4) intron (NM_145660, intron 4 of 4) 9683 NM_145660 80832 Hs.115099 NM_030643 ENSG00000100336 APOL4 APOL-IV|APOLIV apolipoprotein L4 protein-coding chr5-1135 chr5 141088992 141089236 + 16.8 0.000 Intergenic Intergenic -5501 NM_018936 56133 Hs.533023 NM_018936 ENSG00000112852 PCDHB2 PCDH-BETA2 protocadherin beta 2 protein-coding chr9-240 chr9 16704601 16704845 + 16.8 0.000 intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -22091 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr3-1366 chr3 107927634 107927878 + 16.8 0.000 intron (NR_015394, intron 2 of 2) CpG 44551 NR_015394 285205 Hs.134882 NR_015394 ENSG00000240423 LINC00636 - long intergenic non-protein coding RNA 636 ncRNA chr10-988 chr10 46219084 46219328 + 16.8 0.000 non-coding (NR_103827, exon 5 of 5) non-coding (NR_103827, exon 5 of 5) 50402 NR_103827 100996567 Hs.546758 NR_103827 ANTXRLP1 - ANTXR like pseudogene 1 pseudo chr16-809 chr16 28321718 28321962 + 16.8 0.000 3' UTR (NM_001024401, exon 4 of 4) 3' UTR (NM_001024401, exon 4 of 4) 29315 NM_001024401 388228 Hs.97837 NM_001024401 ENSG00000188322 SBK1 SBK SH3 domain binding kinase 1 protein-coding chr4-839 chr4 132333797 132334041 + 16.8 0.000 Intergenic Intergenic -257170 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA chr11-1644 chr11 117273771 117274015 + 16.8 0.000 intron (NM_001077239, intron 6 of 14) LTR26|LTR|ERV1 -17453 NR_037803 100379571 Hs.736305 NR_037803 BACE1-AS BACE1-AS1|BACE1AS|NCRNA00177 BACE1 antisense RNA ncRNA chr1-2572 chr1 180193833 180194077 + 16.8 0.000 intron (NM_002826, intron 10 of 11) intron (NM_002826, intron 10 of 11) -36309 NM_033343 89884 Hs.658487 NM_033343 ENSG00000121454 LHX4 CPHD4 LIM homeobox 4 protein-coding chr1-2345 chr1 39130558 39130802 + 16.8 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 46513 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr19-624 chr19 11355361 11355605 + 16.8 0.000 promoter-TSS (NM_022737) promoter-TSS (NM_022737) 51 NM_001170635 64748 Hs.6846 NM_022737 ENSG00000105520 PLPPR2 LPPR2|PRG4 phospholipid phosphatase related 2 protein-coding chr12-1232 chr12 116143625 116143869 + 16.8 0.000 intron (NM_015335, intron 2 of 30) intron (NM_015335, intron 2 of 30) 4907 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr1-819 chr1 27349761 27350005 + 16.8 0.000 intron (NM_032872, intron 8 of 14) CpG-732 7861 NM_032872 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr3-1375 chr3 111669827 111670071 + 16.8 0.000 Intergenic Intergenic -4727 NM_153268 257068 Hs.477114 NM_153268 ENSG00000240891 PLCXD2 - phosphatidylinositol specific phospholipase C X domain containing 2 protein-coding chr9-881 chr9 35791665 35791909 + 16.8 0.000 promoter-TSS (NM_003995) promoter-TSS (NM_003995) -622 NM_003995 4882 Hs.78518 NM_000907 ENSG00000159899 NPR2 AMDM|ANPRB|ANPb|ECDM|GUC2B|GUCY2B|NPRB|NPRBi|SNSK natriuretic peptide receptor 2 protein-coding chr2-1940 chr2 219724635 219724879 + 16.8 0.000 Intergenic Intergenic 97127 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr2-187 chr2 96536593 96536837 + 16.8 0.000 promoter-TSS (NM_001319085) promoter-TSS (NM_001319085) -37 NM_001319094 10865 Hs.920 NM_006673 ENSG00000196843 ARID5A MRF-1|MRF1|RP11-363D14 AT-rich interaction domain 5A protein-coding chr12-644 chr12 52244087 52244331 + 16.8 0.000 TTS (NR_146274) TTS (NR_146274) 3239 NR_146274 109729127 Hs.670221 NR_146274 ENSG00000257671 KRT7-AS - KRT7 antisense RNA 1 ncRNA chr11-581 chr11 102317298 102317542 + 16.8 0.000 promoter-TSS (NM_001165) promoter-TSS (NM_001165) -64 NM_001165 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr17-1429 chr17 78774575 78774819 + 16.8 0.000 intron (NM_004762, intron 1 of 12) intron (NM_004762, intron 1 of 12) 7511 NM_001365039 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr7-1253 chr7 30931090 30931334 + 16.8 0.000 Intergenic L4_A_Mam|LINE|RTE-X 19359 NM_001329872 358 Hs.76152 NM_000385 ENSG00000240583 AQP1 AQP-CHIP|CHIP28|CO aquaporin 1 (Colton blood group) protein-coding chr12-614 chr12 7512614 7512858 + 16.8 0.000 Intergenic Ricksha_c|DNA|MULE-MuDR -8918 NM_203416 9332 Hs.504641 NM_004244 ENSG00000177575 CD163 M130|MM130|SCARI1 CD163 molecule protein-coding KI270746.1-1 KI270746.1 35773 36017 + 16.8 0.000 NA NA NA NA chr8-888 chr8 68202608 68202852 + 16.8 0.000 intron (NM_024870, intron 37 of 39) MLT2B5|LTR|ERVL -127643 NR_146187 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding chr19-1000 chr19 46346852 46347096 + 16.8 0.000 promoter-TSS (NM_006247) promoter-TSS (NM_006247) -113 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr17-1423 chr17 78130305 78130549 + 16.8 0.000 promoter-TSS (NM_152468) promoter-TSS (NM_152468) -351 NM_152468 147138 Hs.592102 NM_152468 ENSG00000167895 TMC8 EV2|EVER2|EVIN2 transmembrane channel like 8 protein-coding chr10-1087 chr10 6401875 6402119 + 16.8 0.000 intron (NM_001323267, intron 17 of 17) intron (NM_001323267, intron 17 of 17) 51681 NR_148966 399716 Hs.737229 NR_148966 LINC02656 - long intergenic non-protein coding RNA 2656 ncRNA chr1-1198 chr1 155860018 155860262 + 16.8 0.000 promoter-TSS (NM_001282856) promoter-TSS (NM_001282856) 573 NM_152280 23208 Hs.32984 NM_152280 ENSG00000132718 SYT11 SYT12|sytXI synaptotagmin 11 protein-coding chr10-933 chr10 123444234 123444478 + 16.8 0.000 Intergenic Intergenic -221999 NM_153442 2849 Hs.12751 NM_153442 ENSG00000154478 GPR26 - G protein-coupled receptor 26 protein-coding chr16-591 chr16 70454207 70454451 + 16.8 0.000 promoter-TSS (NM_145059) promoter-TSS (NM_145059) -266 NM_145059 197258 Hs.7907 NM_145059 ENSG00000157353 FCSK 1110046B12Rik|CDGF2|FUK fucose kinase protein-coding chr17-538 chr17 2372223 2372467 + 16.8 0.000 exon (NM_014853, exon 15 of 24) exon (NM_014853, exon 15 of 24) 28715 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr17-1212 chr17 2350798 2351042 + 16.8 0.000 intron (NM_001346700, intron 2 of 22) MIRb|SINE|MIR 13419 NM_001346700 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr10-440 chr10 113679151 113679395 + 16.8 0.000 promoter-TSS (NM_033339) promoter-TSS (NM_033339) 79 NM_001320911 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding chr7-1385 chr7 115600171 115600415 + 16.8 0.000 Intergenic Intergenic -18852 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr19-1269 chr19 45818539 45818783 + 16.8 0.000 intron (NM_004819, intron 22 of 26) intron (NM_004819, intron 22 of 26) -3353 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding chr13-414 chr13 113000864 113001108 + 16.8 0.000 promoter-TSS (NM_001320817) promoter-TSS (NM_001320817) -728 NM_001320817 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr20-312 chr20 2524667 2524911 + 16.8 0.000 promoter-TSS (NM_001282495) promoter-TSS (NM_001282495) -267 NM_001282495 79175 Hs.516846 NM_024325 ENSG00000088876 ZNF343 dJ734P14.5 zinc finger protein 343 protein-coding chr14-473 chr14 55258875 55259119 + 16.8 0.000 Intergenic Intergenic -12424 NM_017943 55030 Hs.525348 NM_017943 ENSG00000178974 FBXO34 CGI-301|Fbx34 F-box protein 34 protein-coding chr20-609 chr20 45100762 45101006 + 16.8 0.000 intron (NM_002251, intron 1 of 4) CpG 243 NM_002251 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr6-842 chr6 113432684 113432928 + 16.8 0.000 intron (NR_149098, intron 1 of 1) intron (NR_149098, intron 1 of 1) 641 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr8-799 chr8 144057184 144057428 + 16.8 0.000 promoter-TSS (NR_106905) promoter-TSS (NR_106905) 74 NR_106905 102465509 NR_106905 ENSG00000277888 MIR6846 hsa-mir-6846 microRNA 6846 ncRNA chr7-648 chr7 100691814 100692058 + 16.8 0.000 Intergenic Intergenic -2488 NM_022574 64599 Hs.414396 NM_022574 ENSG00000146830 GIGYF1 GYF1|PERQ1 GRB10 interacting GYF protein 1 protein-coding chr10-751 chr10 98878592 98878836 + 16.6 0.000 intron (NM_021828, intron 3 of 11) L2a|LINE|L2 45854 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA chr12-784 chr12 123973827 123974071 + 16.6 0.000 5' UTR (NM_001204299, exon 2 of 5) 5' UTR (NM_001204299, exon 2 of 5) 734 NM_001204298 144348 Hs.524828 NM_152437 ENSG00000179195 ZNF664 ZFOC1|ZNF176 zinc finger protein 664 protein-coding chr1-2391 chr1 54511093 54511337 + 16.6 0.000 Intergenic Intergenic -37013 NM_147161 26027 Hs.745173 NM_015547 ENSG00000162390 ACOT11 BFIT|STARD14|THEA|THEM1 acyl-CoA thioesterase 11 protein-coding chr22-567 chr22 27531947 27532191 + 16.6 0.000 Intergenic Intergenic 221418 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr8-793 chr8 141462809 141463053 + 16.6 0.000 intron (NR_102364, intron 18 of 26) Tigger1|DNA|TcMar-Tigger 41543 NM_007079 11156 Hs.43666 NM_007079 ENSG00000184489 PTP4A3 PRL-3|PRL-R|PRL3 protein tyrosine phosphatase 4A3 protein-coding chr8-541 chr8 144437110 144437354 + 16.6 0.000 intron (NM_013432, intron 13 of 25) intron (NM_013432, intron 13 of 25) -1613 NR_106953 102466271 NR_106953 ENSG00000276598 MIR6893 hsa-mir-6893 microRNA 6893 ncRNA chr1-2130 chr1 226981611 226981855 + 16.6 0.000 intron (NM_020247, intron 5 of 14) intron (NM_020247, intron 5 of 14) 41439 NM_020247 56997 Hs.118241 NM_020247 ENSG00000163050 COQ8A ADCK3|ARCA2|CABC1|COQ10D4|COQ8|SCAR9 coenzyme Q8A protein-coding chr1-2136 chr1 231139676 231139920 + 16.6 0.000 Intergenic Intergenic -23130 NM_001300889 440730 Hs.655089 NM_001004342 ENSG00000119283 TRIM67 TNL tripartite motif containing 67 protein-coding chr12-878 chr12 96399043 96399287 + 16.6 0.000 intron (NM_002595, intron 1 of 16) intron (NM_002595, intron 1 of 16) 1274 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding chrX-272 chrX 139559726 139559970 + 16.6 0.000 intron (NM_000133, intron 6 of 7) intron (NM_000133, intron 6 of 7) 29112 NM_000133 2158 Hs.522798 NM_000133 ENSG00000101981 F9 F9 p22|FIX|HEMB|P19|PTC|THPH8 coagulation factor IX protein-coding KQ090026.1-1 KQ090026.1 47259 47503 + 16.6 0.000 NA NA NA NA chr1-2037 chr1 50644281 50644525 + 16.6 0.000 intron (NM_007051, intron 8 of 18) L1ME1|LINE|L1 -220960 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding chr6-959 chr6 37059520 37059764 + 16.6 0.000 Intergenic Intergenic 53987 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding chr20-562 chr20 25539927 25540171 + 16.6 0.000 intron (NM_025176, intron 1 of 23) intron (NM_025176, intron 1 of 23) 45482 NM_001318226 22981 Hs.631508 NM_025176 ENSG00000101004 NINL NLP ninein like protein-coding chr17-1280 chr17 30226077 30226321 + 16.6 0.000 intron (NM_001045, intron 1 of 14) intron (NM_001045, intron 1 of 14) 9498 NM_001045 6532 Hs.29792 NM_001045 ENSG00000108576 SLC6A4 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT solute carrier family 6 member 4 protein-coding chr11-1126 chr11 64739638 64739882 + 16.6 0.000 exon (NM_001098670, exon 7 of 17) exon (NM_001098670, exon 7 of 17) 4382 NM_001098671 10235 Hs.99491 NM_005825 ENSG00000068831 RASGRP2 CALDAG-GEFI|CDC25L RAS guanyl releasing protein 2 protein-coding chr1-1393 chr1 151008342 151008586 + 16.6 0.000 promoter-TSS (NM_001303229) promoter-TSS (NM_001303229) 15 NM_001303242 58497 Hs.78524 NM_021222 ENSG00000143363 PRUNE1 DRES-17|DRES17|H-PRUNE|HTCD37|NMIHBA|PRUNE prune exopolyphosphatase 1 protein-coding chr6-485 chr6 7261269 7261513 + 16.6 0.000 Intergenic Intergenic 51808 NM_001292008 6745 Hs.114033 NM_003144 ENSG00000124783 SSR1 TRAPA signal sequence receptor subunit 1 protein-coding chr22-314 chr22 19121591 19121835 + 16.6 0.000 intron (NM_001184781, intron 1 of 9) CpG 699 NM_001173534 9993 Hs.517357 NM_005137 ENSG00000070413 DGCR2 DGS-C|IDD|LAN|SEZ-12 DiGeorge syndrome critical region gene 2 protein-coding chr20-73 chr20 31759194 31759438 + 16.6 0.000 intron (NM_012112, intron 3 of 17) intron (NM_012112, intron 3 of 17) 20026 NM_012112 22974 Hs.244580 NM_012112 ENSG00000088325 TPX2 C20orf1|C20orf2|DIL-2|DIL2|FLS353|GD:C20orf1|HCA519|HCTP4|REPP86|p100 TPX2 microtubule nucleation factor protein-coding chr19-1351 chr19 17974853 17975097 + 16.6 0.000 intron (NM_002248, intron 3 of 10) intron (NM_002248, intron 3 of 10) 23673 NM_002248 3780 Hs.158173 NM_002248 ENSG00000105642 KCNN1 KCa2.1|SK1|SKCA1|hSK1 potassium calcium-activated channel subfamily N member 1 protein-coding chr10-869 chr10 79826647 79826891 + 16.6 0.000 promoter-TSS (NR_120613) promoter-TSS (NR_120613) -175 NR_120612 101060691 Hs.440648 NR_120611 ENSG00000225484 NUTM2B-AS1 - NUTM2B antisense RNA 1 ncRNA chr12-1137 chr12 57370791 57371035 + 16.6 0.000 intron (NM_001351217, intron 1 of 21) intron (NM_001351217, intron 1 of 21) -28457 NM_001351205 22864 Hs.443673 NM_014925 ENSG00000179912 R3HDM2 CAG6|PR01365 R3H domain containing 2 protein-coding chr10-760 chr10 122462640 122462884 + 16.6 0.000 intron (NM_002775, intron 1 of 8) intron (NM_002775, intron 1 of 8) 1209 NM_002775 5654 Hs.501280 NM_002775 ENSG00000166033 HTRA1 ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11 HtrA serine peptidase 1 protein-coding chr3-831 chr3 46209726 46209970 + 16.6 0.000 Intergenic L2a|LINE|L2 -1535 NM_001295 1230 Hs.301921 NM_001295 ENSG00000163823 CCR1 CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1 C-C motif chemokine receptor 1 protein-coding chr7-1002 chr7 101154325 101154569 + 16.6 0.000 promoter-TSS (NM_001283) promoter-TSS (NM_001283) -29 NM_001283 1174 Hs.489365 NM_001283 ENSG00000106367 AP1S1 AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A adaptor related protein complex 1 subunit sigma 1 protein-coding chr2-1176 chr2 240818201 240818445 + 16.6 0.000 intron (NM_004321, intron 1 of 46) intron (NM_004321, intron 1 of 46) 1896 NM_001330289 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr12-1249 chr12 121364947 121365191 + 16.6 0.000 Intergenic LTR33A_|LTR|ERVL -10860 NM_001137559 51433 Hs.7101 NM_016237 ENSG00000089053 ANAPC5 APC5 anaphase promoting complex subunit 5 protein-coding chr7-1186 chr7 1816449 1816693 + 16.6 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 27682 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr10-850 chr10 69360787 69361031 + 16.6 0.000 intron (NM_033496, intron 3 of 17) intron (NM_033496, intron 3 of 17) 42062 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr1-452 chr1 224984744 224984988 + 16.6 0.000 intron (NM_001349911, intron 8 of 10) L1PB1|LINE|L1 55191 NM_001349911 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding chr2-1611 chr2 10644745 10644989 + 16.6 0.000 intron (NR_048552, intron 11 of 19) intron (NR_048552, intron 11 of 19) 45108 NM_024894 79954 Hs.222494 NM_024894 ENSG00000115761 NOL10 PQBP5 nucleolar protein 10 protein-coding chr5-584 chr5 66959625 66959869 + 16.6 0.000 intron (NM_001290226, intron 1 of 26) intron (NM_001290226, intron 1 of 26) 674 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding chr2-1574 chr2 235268908 235269152 + 16.6 0.000 Intergenic Intergenic -225013 NM_014914 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr9-1023 chr9 136131535 136131779 + 16.6 0.000 Intergenic Intergenic -12782 NM_152833 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding chr4-1015 chr4 85866583 85866827 + 16.6 0.000 intron (NM_001287805, intron 1 of 7) LTR33|LTR|ERVL 38768 NM_001287805 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding chr6-482 chr6 4240181 4240425 + 16.6 0.000 Intergenic Intergenic -50274 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr16-1107 chr16 46747761 46748005 + 16.6 0.000 exon (NM_182493, exon 1 of 13) exon (NM_182493, exon 1 of 13) 461 NM_182493 91807 Hs.130465 NM_182493 ENSG00000140795 MYLK3 MLCK|MLCK2|caMLCK myosin light chain kinase 3 protein-coding chr2-1989 chr2 239026084 239026328 + 16.6 0.000 Intergenic Intergenic 42708 NR_039642 100616397 NR_039642 ENSG00000266109 MIR4440 mir-4440 microRNA 4440 ncRNA chr15-640 chr15 48177579 48177823 + 16.6 0.000 promoter-TSS (NM_001370415) promoter-TSS (NM_001370415) 594 NM_001301210 50804 Hs.6638 NM_016132 ENSG00000104177 MYEF2 HsT18564|MEF-2|MST156|MSTP156|myEF-2 myelin expression factor 2 protein-coding chr12-922 chr12 132542059 132542303 + 16.6 0.000 intron (NM_001142641, intron 4 of 16) intron (NM_001142641, intron 4 of 16) -39816 NR_106821 102465975 NR_106821 ENSG00000277052 MIR6763 hsa-mir-6763 microRNA 6763 ncRNA chr1-2374 chr1 46453347 46453591 + 16.6 0.000 Intergenic Intergenic -3765 NR_121680 101929651 Hs.638707 NR_121680 ENSG00000224863 LINC01398 - long intergenic non-protein coding RNA 1398 ncRNA chr2-1971 chr2 234565130 234565374 + 16.6 0.000 Intergenic (TTCT)n|Simple_repeat|Simple_repeat -68171 NM_001282431 10123 Hs.111554 NM_005737 ENSG00000188042 ARL4C ARL7|LAK ADP ribosylation factor like GTPase 4C protein-coding chr2-1553 chr2 217127878 217128122 + 16.6 0.000 Intergenic Intergenic -154733 NR_133642 105373877 NR_133642 DIRC3-AS1 - DIRC3 antisense RNA 1 ncRNA chr11-1391 chr11 1339280 1339524 + 16.6 0.000 Intergenic L1M5|LINE|L1 29694 NR_029409 255512 Hs.588291 NR_029409 ENSG00000255153 TOLLIP-AS1 - TOLLIP antisense RNA 1 (head to head) ncRNA chr8-996 chr8 143394486 143394730 + 16.6 0.000 Intergenic Intergenic -23071 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr10-665 chr10 97217839 97218083 + 16.6 0.000 intron (NR_037909, intron 11 of 14) AluJo|SINE|Alu -32002 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr4-736 chr4 112514834 112515078 + 16.6 0.000 promoter-TSS (NR_161159) promoter-TSS (NR_161159) -423 NR_161159 105377372 NR_161159 LOC105377372 - uncharacterized LOC105377372 ncRNA chr11-1454 chr11 35166762 35167006 + 16.6 0.000 intron (NM_001001389, intron 1 of 16) intron (NM_001001389, intron 1 of 16) 3934 NR_145794 109623487 NR_145794 SNORD164 - small nucleolar RNA, C/D box 164 snoRNA chr20-506 chr20 56322728 56322972 + 16.6 0.000 Intergenic Intergenic -36124 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding chr8-754 chr8 70403808 70404052 + 16.6 0.000 promoter-TSS (NM_001321707) promoter-TSS (NM_001321707) -122 NM_001321711 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr7-1057 chr7 155956713 155956957 + 16.6 0.000 Intergenic (ATAGT)n|Simple_repeat|Simple_repeat -4384 NR_144629 389602 Hs.583071 NM_001291913 LOC389602 - uncharacterized LOC389602 protein-coding chrX-437 chrX 36735429 36735673 + 16.6 0.000 Intergenic Intergenic -272808 NM_001013736 442444 Hs.535216 NM_001013736 ENSG00000198173 FAM47C - family with sequence similarity 47 member C protein-coding chr20-407 chr20 13325026 13325270 + 16.6 0.000 Intergenic Intergenic -85461 NR_040043 100505536 Hs.665253 NR_040043 ISM1-AS1 - ISM1 antisense RNA 1 ncRNA chr6-719 chr6 113065751 113065995 + 16.6 0.000 Intergenic Intergenic 367574 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr17-1380 chr17 65055581 65055825 + 16.6 0.000 promoter-TSS (NM_001282425) promoter-TSS (NM_001282425) 71 NM_001282425 10672 Hs.515018 NM_006572 ENSG00000120063 GNA13 G13 G protein subunit alpha 13 protein-coding chrX-234 chrX 154409239 154409483 + 16.6 0.000 promoter-TSS (NM_006730) promoter-TSS (NM_006730) -107 NM_001303620 1774 Hs.401929 NM_006730 ENSG00000013563 DNASE1L1 DNAS1L1|DNASEX|DNL1L|G4.8|XIB deoxyribonuclease 1 like 1 protein-coding chr19-922 chr19 4052974 4053218 + 16.6 0.000 intron (NM_015898, intron 2 of 2) intron (NM_015898, intron 2 of 2) 12433 NM_001317990 51341 Hs.591384 NM_015898 ENSG00000178951 ZBTB7A FBI-1|FBI1|LRF|TIP21|ZBTB7|ZNF857A|pokemon zinc finger and BTB domain containing 7A protein-coding chr11-890 chr11 57648215 57648459 + 16.6 0.000 intron (NM_001363487, intron 1 of 5) intron (NM_001363487, intron 1 of 5) 1575 NM_145008 219539 Hs.135978 NM_145008 ENSG00000166793 YPEL4 - yippee like 4 protein-coding chr17-764 chr17 34980439 34980683 + 16.6 0.000 promoter-TSS (NM_002311) promoter-TSS (NM_002311) 49 NM_013975 3980 Hs.100299 NM_002311 ENSG00000005156 LIG3 LIG2|LIG3alpha DNA ligase 3 protein-coding chr11-1214 chr11 117590663 117590907 + 16.6 0.000 intron (NM_020693, intron 3 of 32) intron (NM_020693, intron 3 of 32) 206431 NM_001367904 57453 Hs.659513 NM_020693 ENSG00000177103 DSCAML1 DSCAM2 DS cell adhesion molecule like 1 protein-coding chr4-629 chr4 173211953 173212197 + 16.6 0.000 intron (NM_017423, intron 1 of 11) intron (NM_017423, intron 1 of 11) -42423 NR_134241 101930370 Hs.563191 NR_134241 ENSG00000245213 LOC101930370 - uncharacterized LOC101930370 ncRNA chr2-1687 chr2 46236836 46237080 + 16.6 0.000 Intergenic Intergenic -60449 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr4-146 chr4 101347452 101347696 + 16.6 0.000 promoter-TSS (NM_000944) promoter-TSS (NM_000944) -48 NM_001130692 5530 Hs.435512 NM_000944 ENSG00000138814 PPP3CA ACCIID|CALN|CALNA|CALNA1|CCN1|CNA1|IECEE|IECEE1|PPP2B protein phosphatase 3 catalytic subunit alpha protein-coding chr20-318 chr20 17612614 17612858 + 16.6 0.000 TTS (NM_004587) TTS (NM_004587) 42661 NM_006870 11034 Hs.304192 NM_006870 ENSG00000125868 DSTN ACTDP|ADF|HEL32|bA462D18.2 destrin, actin depolymerizing factor protein-coding chr1-2446 chr1 93680677 93680921 + 16.6 0.000 intron (NM_001261408, intron 3 of 13) CpG 571 NM_001261409 8412 Hs.36958 NM_003567 ENSG00000137936 BCAR3 AND-34|NSP2|SH2D3B BCAR3 adaptor protein, NSP family member protein-coding chr10-732 chr10 50622110 50622354 + 16.6 0.000 intron (NM_147156, intron 1 of 10) intron (NM_147156, intron 1 of 10) 1724 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr4-948 chr4 38731011 38731255 + 16.6 0.000 Intergenic Intergenic 51857 NM_001195106 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chr7-403 chr7 149126351 149126595 + 16.6 0.000 promoter-TSS (NM_020781) promoter-TSS (NM_020781) 65 NM_020781 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr17-1092 chr17 83202133 83202377 + 16.6 0.000 Intergenic Intergenic -24642 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr1-2280 chr1 21260726 21260970 + 16.6 0.000 intron (NM_001113347, intron 2 of 16) intron (NM_001113347, intron 2 of 16) 18767 NM_001113347 1889 Hs.195080 NM_001397 ENSG00000117298 ECE1 ECE endothelin converting enzyme 1 protein-coding chr2-667 chr2 28356112 28356356 + 16.6 0.000 Intergenic Intergenic -36624 NM_005253 2355 Hs.220971 NM_005253 ENSG00000075426 FOSL2 FRA2 FOS like 2, AP-1 transcription factor subunit protein-coding chr10-1175 chr10 69757511 69757755 + 16.6 0.000 Intergenic Intergenic -44273 NM_080805 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding chr4-813 chr4 51922810 51923054 + 16.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 79353 NM_001287755 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding chr3-306 chr3 48734423 48734667 + 16.6 0.000 Intergenic SVA_D|Retroposon|SVA -17267 NM_001005909 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding chr20-553 chr20 23145439 23145683 + 16.6 0.000 Intergenic Intergenic -12925 NR_034149 200261 Hs.352228 NM_182535 ENSG00000233746 LINC00656 - long intergenic non-protein coding RNA 656 ncRNA chr7-921 chr7 22375368 22375612 + 16.6 0.000 Intergenic MER102c|DNA|hAT-Charlie -18336 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr7-1368 chr7 102286993 102287237 + 16.6 0.000 intron (NM_001359230, intron 1 of 8) CpG 247 NM_001359230 10603 Hs.489448 NM_020979 ENSG00000160999 SH2B2 APS SH2B adaptor protein 2 protein-coding chr1-1143 chr1 23868024 23868268 + 16.6 0.000 exon (NM_000147, exon 1 of 8) exon (NM_000147, exon 1 of 8) 223 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA alpha-L-fucosidase 1 protein-coding chr8-239 chr8 100900405 100900649 + 16.6 0.000 Intergenic Intergenic 50044 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding chr3-1057 chr3 174937327 174937571 + 16.6 0.000 intron (NM_207015, intron 1 of 13) intron (NM_207015, intron 1 of 13) 78115 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr11-798 chr11 65211780 65212024 + 16.6 0.000 non-coding (NR_040008, exon 21 of 21) non-coding (NR_040008, exon 21 of 21) -1938 NR_033396 440044 Hs.532372 NM_001004326 ENSG00000197847 SLC22A20P Oat6|SLC22A20 solute carrier family 22 member 20, pseudogene pseudo chr5-1041 chr5 58459216 58459460 + 16.6 0.000 intron (NM_006622, intron 1 of 13) intron (NM_006622, intron 1 of 13) 748 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding chr2-888 chr2 9274291 9274535 + 16.6 0.000 intron (NM_003887, intron 1 of 27) AluSz|SINE|Alu 67601 NM_003887 8853 Hs.555902 NM_003887 ENSG00000151693 ASAP2 AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 protein-coding chr6-605 chr6 70955957 70956201 + 16.6 0.000 exon (NM_080742, exon 1 of 4) exon (NM_080742, exon 1 of 4) 981 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding chr4-962 chr4 41989759 41990003 + 16.6 0.000 promoter-TSS (NM_006345) promoter-TSS (NM_006345) -649 NM_006345 10463 Hs.479634 NM_006345 ENSG00000014824 SLC30A9 BILAPES|C4orf1|GAC63|HUEL|ZNT9 solute carrier family 30 member 9 protein-coding chr16-571 chr16 2988569 2988813 + 16.6 0.000 promoter-TSS (NR_033861) promoter-TSS (NR_033861) -363 NR_033861 283875 Hs.620489 NR_033861 LINC00514 LA16c-380H5.1 long intergenic non-protein coding RNA 514 ncRNA chr9-1433 chr9 136976466 136976710 + 16.6 0.000 promoter-TSS (NM_000954) promoter-TSS (NM_000954) -916 NM_000954 5730 Hs.446429 NM_000954 ENSG00000107317 PTGDS L-PGDS|LPGDS|PDS|PGD2|PGDS|PGDS2 prostaglandin D2 synthase protein-coding chr19-563 chr19 55675079 55675323 + 16.6 0.000 promoter-TSS (NM_001130072) promoter-TSS (NM_001130072) 6 NM_001130072 29924 Hs.279953 NM_013333 ENSG00000063245 EPN1 - epsin 1 protein-coding chr14-303 chr14 92540589 92540833 + 16.6 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 26930 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr1-915 chr1 19179625 19179869 + 16.6 0.000 intron (NM_020765, intron 17 of 105) intron (NM_020765, intron 17 of 105) 30519 NM_020765 23352 Hs.148078 NM_020765 ENSG00000127481 UBR4 RBAF600|ZUBR1|p600 ubiquitin protein ligase E3 component n-recognin 4 protein-coding chr11-1343 chr11 96853230 96853474 + 16.6 0.000 Intergenic Intergenic 344927 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA chr2-1869 chr2 174787817 174788061 + 16.6 0.000 Intergenic Intergenic -23467 NM_001039523 1134 Hs.434479 NM_000079 ENSG00000138435 CHRNA1 ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS cholinergic receptor nicotinic alpha 1 subunit protein-coding chr19-1289 chr19 50418398 50418642 + 16.6 0.000 promoter-TSS (NM_003121) promoter-TSS (NM_003121) -418 NM_001243999 6689 Hs.437905 NM_003121 ENSG00000269404 SPIB SPI-B Spi-B transcription factor protein-coding chr8-865 chr8 43511635 43511879 + 16.6 0.000 Intergenic Intergenic 219315 NM_001005365 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding chr2-416 chr2 183038115 183038359 + 16.6 0.000 5' UTR (NM_205842, exon 1 of 32) 5' UTR (NM_205842, exon 1 of 32) 220 NM_013436 10787 Hs.603732 NM_013436 ENSG00000061676 NCKAP1 HEM2|NAP1|NAP125|p125Nap1 NCK associated protein 1 protein-coding chr1-2050 chr1 76862545 76862789 + 16.6 0.000 Intergenic L2a|LINE|L2 -4813 NM_001320274 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr4-1083 chr4 148634607 148634851 + 16.6 0.000 Intergenic Intergenic -190031 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr17-1169 chr17 74516175 74516419 + 16.6 0.000 Intergenic MLT2A2|LTR|ERVL 15178 NM_174892 124599 Hs.313343 NM_174892 ENSG00000178789 CD300LB CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5 CD300 molecule like family member b protein-coding chr9-1192 chr9 33708484 33708728 + 16.6 0.000 Intergenic MER41A|LTR|ERV1 29810 NR_109755 101929688 Hs.372465 NR_109755 ENSG00000233776 LINC01251 - long intergenic non-protein coding RNA 1251 ncRNA chr13-249 chr13 52450449 52450693 + 16.6 0.000 promoter-TSS (NM_001282169) promoter-TSS (NM_001282169) 63 NM_016075 51028 Hs.109520 NM_016075 ENSG00000136100 VPS36 C13orf9|CGI-145|EAP45 vacuolar protein sorting 36 homolog protein-coding chr9-1297 chr9 115167184 115167428 + 16.6 0.000 intron (NR_163556, intron 1 of 7) L2c|LINE|L2 25488 NR_163556 50514 Hs.148841 NM_017418 ENSG00000173077 DEC1 CTS9 deleted in esophageal cancer 1 ncRNA chr4-989 chr4 61375347 61375591 + 16.6 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 173297 NM_001371342 chr4-916 chr4 8185674 8185918 + 16.6 0.000 Intergenic L1MC3|LINE|L1 -13494 NR_134639 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr9-859 chr9 19408838 19409082 + 16.6 0.000 promoter-TSS (NM_001010887) promoter-TSS (NM_001010887) -49 NM_001010887 340485 Hs.41379 NM_001010887 ENSG00000177076 ACER2 ALKCDase2|ASAH3L alkaline ceramidase 2 protein-coding chr6-971 chr6 42184722 42184966 + 16.6 0.000 exon (NM_002098, exon 4 of 4) exon (NM_002098, exon 4 of 4) 10112 NM_002098 2979 Hs.446529 NM_002098 ENSG00000112599 GUCA1B GCAP 2|GCAP2|GUCA2|RP48 guanylate cyclase activator 1B protein-coding chr10-675 chr10 102546777 102547021 + 16.6 0.000 intron (NM_001178133, intron 2 of 10) intron (NM_001178133, intron 2 of 10) 42927 NM_001178133 51684 Hs.404089 NM_016169 ENSG00000107882 SUFU JBTS32|PRO1280|SUFUH|SUFUXL SUFU negative regulator of hedgehog signaling protein-coding chr3-729 chr3 50227458 50227702 + 16.6 0.000 TTS (NR_106714) TTS (NR_106714) 144 NR_106714 102464817 NR_106714 ENSG00000275334 MIR5787 hsa-mir-5787 microRNA 5787 ncRNA chr20-342 chr20 50286429 50286673 + 16.6 0.000 Intergenic Intergenic -6169 NR_034124 284751 Hs.282325 NM_001025463 ENSG00000203999 LINC01270 - long intergenic non-protein coding RNA 1270 ncRNA chr2-1107 chr2 96146329 96146573 + 16.6 0.000 Intergenic Intergenic -1011 NM_004418 1844 Hs.1183 NM_004418 ENSG00000158050 DUSP2 PAC-1|PAC1 dual specificity phosphatase 2 protein-coding chr16-585 chr16 67653299 67653543 + 16.6 0.000 intron (NM_001317026, intron 30 of 37) CpG-9844 6839 NM_022914 65057 Hs.78019 NM_022914 ENSG00000102977 ACD PIP1|PTOP|TINT1|TPP1 ACD shelterin complex subunit and telomerase recruitment factor protein-coding chr3-649 chr3 29057330 29057574 + 16.6 0.000 Intergenic L1PB1|LINE|L1 223487 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA chr15-494 chr15 65304709 65304953 + 16.6 0.000 TTS (NR_002757) TTS (NR_002757) 154 NR_002757 26832 NR_002757 ENSG00000200156 RNU5B-1 RNU5B|RNU5B-1P|U5B1 RNA, U5B small nuclear 1 snRNA chr18-347 chr18 58314081 58314325 + 16.6 0.000 intron (NM_001144965, intron 5 of 30) AluSz|SINE|Alu 92632 NM_001144966 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr12-1113 chr12 52280432 52280676 + 16.6 0.000 intron (NM_001320198, intron 2 of 10) intron (NM_001320198, intron 2 of 10) 5909 NM_001320198 3892 Hs.278658 NM_002284 ENSG00000170442 KRT86 HB6|Hb1|K86|KRTHB1|KRTHB6|MNX keratin 86 protein-coding chr3-1163 chr3 143529123 143529367 + 16.6 0.000 intron (NM_173653, intron 9 of 15) intron (NM_173653, intron 9 of 15) 186999 NR_048544 100885796 Hs.581618 NR_048544 ENSG00000240012 SLC9A9-AS1 - SLC9A9 antisense RNA 1 ncRNA chr3-1312 chr3 55819052 55819296 + 16.6 0.000 intron (NR_132749, intron 13 of 17) intron (NR_132749, intron 13 of 17) 33420 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA chr12-1244 chr12 120371485 120371729 + 16.6 0.000 Intergenic Intergenic -2443 NM_002442 4440 Hs.158311 NM_002442 ENSG00000135097 MSI1 - musashi RNA binding protein 1 protein-coding chr16-1087 chr16 26274840 26275084 + 16.6 0.000 Intergenic Intergenic 249725 NR_036146 100422923 NR_036146 ENSG00000265005 MIR548W - microRNA 548w ncRNA chr8-984 chr8 140955714 140955958 + 16.6 0.000 intron (NM_001352719, intron 1 of 32) HAL1|LINE|L1 45168 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr20-661 chr20 63054861 63055105 + 16.6 0.000 intron (NR_033370, intron 1 of 4) intron (NR_033370, intron 1 of 4) 16972 NR_033369 100144597 Hs.636485 NR_033369 ENSG00000237119 LINC01056 - long intergenic non-protein coding RNA 1056 ncRNA chr9-1243 chr9 89448383 89448627 + 16.6 0.000 intron (NM_001371200, intron 2 of 20) intron (NM_001371200, intron 2 of 20) 31385 NR_163884 chr3-1240 chr3 30435955 30436199 + 16.6 0.000 Intergenic L1ME3A|LINE|L1 -82791 NR_147054 101928015 Hs.581534 NR_147054 LINC01985 - long intergenic non-protein coding RNA 1985 ncRNA chr17-836 chr17 932613 932857 + 16.6 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 23103 NR_135633 101927727 Hs.666198 NR_135633 ENSG00000262003 LOC101927727 - uncharacterized LOC101927727 ncRNA chr2-1065 chr2 9771700 9771944 + 16.6 0.000 Intergenic Intergenic -71620 NM_001318976 9014 Hs.584833 NM_005680 ENSG00000115750 TAF1B MGC:9349|RAF1B|RAFI63|SL1|TAFI63 TATA-box binding protein associated factor, RNA polymerase I subunit B protein-coding chr1-1641 chr1 6359657 6359901 + 16.6 0.000 promoter-TSS (NM_181866) promoter-TSS (NM_181866) -850 NM_181866 11332 Hs.126137 NM_007274 ENSG00000097021 ACOT7 ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH acyl-CoA thioesterase 7 protein-coding chr16-948 chr16 63039648 63039892 + 16.6 0.000 Intergenic AluSz6|SINE|Alu -1003332 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr6-566 chr6 156780459 156780703 + 16.6 0.000 promoter-TSS (NR_039676) promoter-TSS (NR_039676) -850 NR_039676 100616154 NR_039676 ENSG00000271899 MIR4466 mir-4466 microRNA 4466 ncRNA chr5-684 chr5 137666405 137666649 + 16.6 0.000 intron (NM_017415, intron 6 of 14) intron (NM_017415, intron 6 of 14) -18878 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr1-1214 chr1 201111190 201111434 + 16.5 0.000 intron (NM_000069, intron 1 of 43) intron (NM_000069, intron 1 of 43) 1114 NM_000069 779 Hs.1294 NM_000069 ENSG00000081248 CACNA1S CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP calcium voltage-gated channel subunit alpha1 S protein-coding chr22-221 chr22 21629769 21630013 + 16.5 0.000 non-coding (NR_163923, exon 1 of 4) non-coding (NR_163923, exon 1 of 4) 131 NR_163924 chr3-994 chr3 113697619 113697863 + 16.5 0.000 Intergenic Intergenic -1095 NR_111981 205717 Hs.632570 NM_001009899 ENSG00000176542 USF3 KIAA2018 upstream transcription factor family member 3 protein-coding chr21-51 chr21 45500186 45500430 + 16.5 0.000 intron (NM_130445, intron 32 of 42) (GT)n|Simple_repeat|Simple_repeat 22042 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr19-1203 chr19 14561280 14561524 + 16.5 0.000 intron (NM_001321170, intron 2 of 13) intron (NM_001321170, intron 2 of 13) 10664 NM_004146 4713 Hs.532853 NM_004146 ENSG00000099795 NDUFB7 B18|CI-B18 NADH:ubiquinone oxidoreductase subunit B7 protein-coding chr2-1229 chr2 43082501 43082745 + 16.5 0.000 Intergenic Intergenic 19822 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA chr16-956 chr16 68519337 68519581 + 16.5 0.000 Intergenic L2b|LINE|L2 -19754 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr17-1077 chr17 81929947 81930191 + 16.5 0.000 non-coding (NR_015454, exon 2 of 2) non-coding (NR_015454, exon 2 of 2) 2240 NR_015454 92659 Hs.336958 NR_015454 ENSG00000265688 MAFG-DT MAFG-AS1 MAFG divergent transcript ncRNA chr6-646 chr6 3696706 3696950 + 16.5 0.000 Intergenic Intergenic 55184 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr1-1515 chr1 51567723 51567967 + 16.5 0.000 intron (NR_161259, intron 4 of 8) intron (NR_161259, intron 4 of 8) 15886 NR_161259 441884 NR_161259 CALR4P - calreticulin 4, pseudogene pseudo chrX-218 chrX 112840735 112840979 + 16.5 0.000 promoter-TSS (NM_133265) promoter-TSS (NM_133265) -26 NM_133265 154796 Hs.528051 NM_133265 ENSG00000126016 AMOT - angiomotin protein-coding chr5-713 chr5 169390 169634 + 16.5 0.000 exon (NM_052909, exon 14 of 20) exon (NM_052909, exon 14 of 20) -21983 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr2-965 chr2 99155194 99155438 + 16.5 0.000 promoter-TSS (NR_146054) promoter-TSS (NR_146054) 242 NR_037935 51601 Hs.719172 NM_015929 ENSG00000144182 LIPT1 LIPT1D lipoyltransferase 1 protein-coding chr6-853 chr6 133502485 133502729 + 16.5 0.000 non-coding (NR_109982, exon 9 of 9) non-coding (NR_109982, exon 9 of 9) 261108 NM_001301013 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding chr19-830 chr19 48480369 48480613 + 16.5 0.000 3' UTR (NM_004228, exon 12 of 12) 3' UTR (NM_004228, exon 12 of 12) 11122 NM_004228 9266 Hs.144011 NM_004228 ENSG00000105443 CYTH2 ARNO|CTS18|CTS18.1|PSCD2|PSCD2L|SEC7L|Sec7p-L|Sec7p-like|cytohesin-2 cytohesin 2 protein-coding chr5-877 chr5 55252028 55252272 + 16.5 0.000 Intergenic LTR49|LTR|ERV1 -18433 NR_125347 10309 Hs.3041 NM_021147 ENSG00000152669 CCNO CCNU|CILD29|UDG2 cyclin O protein-coding chr13-317 chr13 30792291 30792535 + 16.5 0.000 Intergenic Intergenic -10793 NR_047012 100874158 Hs.577982 NR_047012 ENSG00000237879 LINC00398 - long intergenic non-protein coding RNA 398 ncRNA chr9-923 chr9 98374843 98375087 + 16.5 0.000 intron (NM_005458, intron 11 of 18) intron (NM_005458, intron 11 of 18) -119316 NM_018421 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding chrX-243 chrX 38801355 38801599 + 16.5 0.000 promoter-TSS (NM_021242) promoter-TSS (NM_021242) 18 NM_001098790 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding chr6-809 chr6 52522106 52522350 + 16.5 0.000 intron (NM_012288, intron 2 of 10) Charlie8|DNA|hAT-Charlie 54832 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr9-992 chr9 132079700 132079944 + 16.5 0.000 promoter-TSS (NM_004269) promoter-TSS (NM_004269) 45 NM_001253881 9442 Hs.374262 NM_004269 ENSG00000160563 MED27 CRAP34|CRSP34|CRSP8|MED3|TRAP37 mediator complex subunit 27 protein-coding chr12-616 chr12 10613589 10613833 + 16.5 0.000 promoter-TSS (NM_001319985) promoter-TSS (NM_001319985) -102 NR_135120 55110 Hs.104650 NM_018048 ENSG00000111196 MAGOHB MGN2|mago|magoh mago homolog B, exon junction complex subunit protein-coding chr14-359 chr14 37594599 37594843 + 16.5 0.000 promoter-TSS (NM_001310135) promoter-TSS (NM_001310135) 528 NM_004496 3169 Hs.163484 NM_004496 ENSG00000129514 FOXA1 HNF3A|TCF3A forkhead box A1 protein-coding chr11-1507 chr11 62125272 62125516 + 16.5 0.000 intron (NM_001040694, intron 1 of 18) intron (NM_001040694, intron 1 of 18) 1383 NM_020238 3619 Hs.142179 NM_020238 ENSG00000149503 INCENP - inner centromere protein protein-coding chr20-405 chr20 12166049 12166293 + 16.5 0.000 Intergenic LTR33C|LTR|ERVL 248278 NM_014962 22903 Hs.709366 NM_014962 ENSG00000132640 BTBD3 dJ742J24.1 BTB domain containing 3 protein-coding chrX-320 chrX 104112540 104112784 + 16.5 0.000 non-coding (NR_026694, exon 1 of 4) non-coding (NR_026694, exon 1 of 4) 139 NR_026694 644353 Hs.648338 NM_001143978 ENSG00000166707 ZCCHC18 PNMA7B|SIZN2 zinc finger CCHC-type containing 18 protein-coding chr1-1220 chr1 206114521 206114765 + 16.5 0.000 intron (NM_000707, intron 1 of 1) intron (NM_000707, intron 1 of 1) 2745 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr16-1092 chr16 29992401 29992645 + 16.5 0.000 TTS (NM_004783) TTS (NM_004783) 3094 NM_003609 8479 Hs.567370 NM_003609 ENSG00000149929 HIRIP3 - HIRA interacting protein 3 protein-coding chr18-324 chr18 34801319 34801563 + 16.5 0.000 intron (NM_001198945, intron 5 of 10) intron (NM_001198945, intron 5 of 10) -16521 NM_001198943 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding chr15-628 chr15 41429501 41429745 + 16.5 0.000 intron (NM_015138, intron 1 of 17) L2a|LINE|L2 12519 NM_015138 23168 Hs.511096 NM_015138 ENSG00000137815 RTF1 GTL7|KIAA0252 RTF1 homolog, Paf1/RNA polymerase II complex component protein-coding chr4-660 chr4 3765385 3765629 + 16.5 0.000 promoter-TSS (NM_000683) promoter-TSS (NM_000683) -878 NM_000683 152 Hs.123022 NM_000683 ENSG00000184160 ADRA2C ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR adrenoceptor alpha 2C protein-coding chr22-688 chr22 38261539 38261783 + 16.5 0.000 intron (NM_001195072, intron 1 of 9) intron (NM_001195072, intron 1 of 9) 11003 NM_001195071 25829 Hs.182626 NM_012264 ENSG00000198792 TMEM184B C22orf5|FM08|HS5O6A|HSPC256 transmembrane protein 184B protein-coding chr3-734 chr3 52441525 52441769 + 16.5 0.000 exon (NM_020163, exon 6 of 16) exon (NM_020163, exon 6 of 16) 3456 NM_020163 56920 Hs.59729 NM_020163 ENSG00000010319 SEMA3G sem2 semaphorin 3G protein-coding chr11-945 chr11 106988988 106989232 + 16.5 0.000 intron (NM_001256424, intron 1 of 8) intron (NM_001256424, intron 1 of 8) 29366 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr11-1629 chr11 102120617 102120861 + 16.5 0.000 intron (NM_001130145, intron 2 of 8) intron (NM_001130145, intron 2 of 8) 8291 NM_001195045 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr13-382 chr13 41130608 41130852 + 16.5 0.000 exon (NM_152903, exon 1 of 1) exon (NM_152903, exon 1 of 1) 2072 NM_152903 89890 Hs.534040 NM_152903 ENSG00000165572 KBTBD6 - kelch repeat and BTB domain containing 6 protein-coding chr3-1076 chr3 188151444 188151688 + 16.5 0.000 non-coding (NR_036497, exon 1 of 1) non-coding (NR_036497, exon 1 of 1) -2332 NM_001167672 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr2-571 chr2 218010203 218010447 + 16.5 0.000 Intergenic CpG -24609 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr2-1058 chr2 240875560 240875804 + 16.5 0.000 intron (NM_000030, intron 7 of 10) intron (NM_000030, intron 7 of 10) 6858 NM_000030 189 Hs.144567 NM_000030 ENSG00000172482 AGXT AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6 alanine--glyoxylate and serine--pyruvate aminotransferase protein-coding chr21-103 chr21 41420188 41420432 + 16.5 0.000 promoter-TSS (NM_001144925) promoter-TSS (NM_001144925) -248 NM_001144925 4599 Hs.517307 NM_002462 ENSG00000157601 MX1 IFI-78K|IFI78|MX|MxA MX dynamin like GTPase 1 protein-coding chr7-938 chr7 42677952 42678196 + 16.5 0.000 intron (NR_110833, intron 1 of 2) intron (NR_110833, intron 1 of 2) 28373 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA chr16-966 chr16 79468592 79468836 + 16.5 0.000 Intergenic Intergenic 132023 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr2-1916 chr2 212364540 212364784 + 16.5 0.000 intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 61698 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr11-1287 chr11 47333020 47333264 + 16.5 0.000 intron (NM_000256, intron 29 of 33) intron (NM_000256, intron 29 of 33) 19560 NM_000256 4607 Hs.524906 NM_000256 ENSG00000134571 MYBPC3 CMD1MM|CMH4|FHC|LVNC10|MYBP-C myosin binding protein C, cardiac protein-coding chrX-119 chrX 19991105 19991349 + 16.5 0.000 Intergenic CpG -1448 NR_024440 729609 Hs.554726 NR_024440 LOC729609 - uncharacterized LOC729609 ncRNA chr7-1130 chr7 93921988 93922232 + 16.5 0.000 5' UTR (NM_004126, exon 1 of 2) 5' UTR (NM_004126, exon 1 of 2) 375 NM_004126 2791 Hs.83381 NM_004126 ENSG00000127920 GNG11 GNGT11 G protein subunit gamma 11 protein-coding chr3-1069 chr3 186021777 186022021 + 16.5 0.000 Intergenic L2b|LINE|L2 61956 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo chr21-175 chr21 39441515 39441759 + 16.5 0.000 intron (NM_152505, intron 1 of 9) intron (NM_152505, intron 1 of 9) 2565 NM_152505 150082 Hs.517284 NM_152505 ENSG00000157578 LCA5L C21orf13 lebercilin LCA5 like protein-coding chr9-469 chr9 35726931 35727175 + 16.5 0.000 intron (NM_006289, intron 1 of 56) intron (NM_006289, intron 1 of 56) 5142 NM_006289 7094 Hs.471014 NM_006289 ENSG00000137076 TLN1 ILWEQ|TLN|talin-1 talin 1 protein-coding chr3-1173 chr3 156605607 156605851 + 16.5 0.000 Intergenic Intergenic -50529 NM_001308197 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding chr4-587 chr4 16757399 16757643 + 16.5 0.000 intron (NR_130734, intron 5 of 6) intron (NR_130734, intron 5 of 6) 141124 NM_001290 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr5-562 chr5 8844118 8844362 + 16.5 0.000 intron (NR_109932, intron 1 of 2) intron (NR_109932, intron 1 of 2) 4508 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA chr10-472 chr10 89644619 89644863 + 16.5 0.000 promoter-TSS (NM_148978) promoter-TSS (NM_148978) -825 NM_148978 53354 Hs.163555 NM_138316 ENSG00000152782 PANK1 PANK pantothenate kinase 1 protein-coding chr5-1099 chr5 130483854 130484098 + 16.5 0.000 Intergenic Intergenic 579511 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding chr12-979 chr12 72121658 72121902 + 16.5 0.000 Intergenic L1M1|LINE|L1 -150969 NM_013381 29953 Hs.199814 NM_013381 ENSG00000072657 TRHDE PAP-II|PGPEP2|TRH-DE thyrotropin releasing hormone degrading enzyme protein-coding chr3-885 chr3 158105646 158105890 + 16.5 0.000 exon (NM_006884, exon 1 of 5) exon (NM_006884, exon 1 of 5) 395 NM_003030 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding chr17-1153 chr17 51001216 51001460 + 16.5 0.000 intron (NM_001130527, intron 12 of 29) intron (NM_001130527, intron 12 of 29) 45540 NM_001251971 9043 Hs.463439 NM_003971 ENSG00000008294 SPAG9 CT89|HLC-6|HLC4|HLC6|JIP-4|JIP4|JLP|PHET|PIG6 sperm associated antigen 9 protein-coding chr8-605 chr8 23067720 23067964 + 16.5 0.000 promoter-TSS (NR_038873) promoter-TSS (NR_038873) -387 NR_038873 286059 Hs.306673 NR_038873 ENSG00000246130 LOC286059 - TNF receptor superfamily member 10d pseudogene pseudo chr12-501 chr12 3218614 3218858 + 16.5 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 141357 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chr17-1319 chr17 44014328 44014572 + 16.5 0.000 exon (NM_032376, exon 2 of 4) exon (NM_032376, exon 2 of 4) 513 NM_032376 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr16-857 chr16 74480364 74480608 + 16.5 0.000 intron (NR_027264, intron 10 of 26) intron (NR_027264, intron 10 of 26) -59016 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding chr3-1191 chr3 189474838 189475082 + 16.5 0.000 Intergenic Intergenic -121786 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding chrX-130 chrX 115561058 115561302 + 16.5 0.000 promoter-TSS (NM_005032) promoter-TSS (NM_005032) 6 NM_001282337 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr15-528 chr15 89655680 89655924 + 16.5 0.000 promoter-TSS (NM_198525) promoter-TSS (NM_198525) -335 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding chr8-499 chr8 69666663 69666907 + 16.5 0.000 TTS (NM_001146008) TTS (NM_001146008) 73885 NR_132437 23213 Hs.409602 NM_015170 ENSG00000137573 SULF1 SULF-1 sulfatase 1 protein-coding chr5-1032 chr5 53779512 53779756 + 16.5 0.000 intron (NR_147167, intron 4 of 5) MamRTE1|LINE|RTE-BovB 40048 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA chr2-1120 chr2 127857519 127857763 + 16.5 0.000 intron (NM_004805, intron 1 of 3) MER67A|LTR|ERV1 514 NM_004805 5433 Hs.715348 NM_004805 ENSG00000144231 POLR2D HSRBP4|HSRPB4|RBP4|RPB16 RNA polymerase II subunit D protein-coding chr7-1297 chr7 50267532 50267776 + 16.5 0.000 Intergenic Intergenic -36410 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding chrX-400 chrX 136131138 136131382 + 16.5 0.000 Intergenic Tigger7|DNA|TcMar-Tigger -15442 NR_027621 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr20-505 chr20 51372350 51372594 + 16.5 0.000 Intergenic Intergenic 80505 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr17-1057 chr17 78913568 78913812 + 16.5 0.000 intron (NM_003255, intron 1 of 4) AluJb|SINE|Alu -10489 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding chr3-1363 chr3 106781841 106782085 + 16.5 0.000 Intergenic MER90a|LTR|ERV1 458675 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA chr11-1637 chr11 111441336 111441580 + 16.5 0.000 Intergenic Intergenic -23272 NR_046085 100132078 Hs.672662 NR_046085 ENSG00000255428 LOC100132078 - uncharacterized LOC100132078 ncRNA chr15-234 chr15 72473899 72474143 + 16.5 0.000 promoter-TSS (NM_005744) promoter-TSS (NM_005744) 218 NR_135678 105370888 Hs.540241 NR_135678 ENSG00000261423 TMEM202-AS1 - TMEM202 antisense RNA 1 ncRNA chr12-957 chr12 49031530 49031774 + 16.5 0.000 exon (NM_003482, exon 39 of 54) exon (NM_003482, exon 39 of 54) -12876 NM_001206709 5571 Hs.530862 NM_002733 ENSG00000181929 PRKAG1 AMPKG protein kinase AMP-activated non-catalytic subunit gamma 1 protein-coding chr15-390 chr15 72203417 72203661 + 16.5 0.000 intron (NM_182470, intron 8 of 10) intron (NM_182470, intron 8 of 10) -5752 NM_001012642 196996 Hs.596332 NM_001012642 ENSG00000175318 GRAMD2A GRAMD2 GRAM domain containing 2A protein-coding chr15-433 chr15 68334715 68334959 + 16.5 0.000 intron (NM_001004439, intron 12 of 29) intron (NM_001004439, intron 12 of 29) 57092 NM_015322 10116 Hs.362733 NM_015322 ENSG00000169018 FEM1B F1A-ALPHA|F1AA|FEM1-beta fem-1 homolog B protein-coding chr16-403 chr16 75432955 75433199 + 16.5 0.000 intron (NM_006324, intron 1 of 6) CpG 426 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr14-723 chr14 63339732 63339976 + 16.5 0.000 Intergenic AluJb|SINE|Alu -20919 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding chr11-882 chr11 45859811 45860055 + 16.5 0.000 intron (NM_001127457, intron 3 of 11) intron (NM_001127457, intron 3 of 11) 12458 NM_021117 1408 Hs.532491 NM_021117 ENSG00000121671 CRY2 HCRY2|PHLL2 cryptochrome circadian regulator 2 protein-coding chr9-158 chr9 116838456 116838700 + 16.5 0.000 intron (NM_014010, intron 10 of 21) AluSq2|SINE|Alu 151273 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr10-1020 chr10 77564907 77565151 + 16.5 0.000 intron (NM_001271519, intron 1 of 28) intron (NM_001271519, intron 1 of 28) 72779 NM_001322837 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding chr11-872 chr11 33257685 33257929 + 16.5 0.000 promoter-TSS (NM_001278162) promoter-TSS (NM_001278162) 426 NM_001048200 10114 Hs.201918 NM_005734 ENSG00000110422 HIPK3 DYRK6|FIST3|PKY|YAK1 homeodomain interacting protein kinase 3 protein-coding KI270733.1-14 KI270733.1 128646 128890 + 16.5 0.000 NA NA NA NA chr9-301 chr9 91421397 91421641 + 16.5 0.000 intron (NM_001290000, intron 1 of 1) CpG 2313 NM_005384 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr17-1365 chr17 60743848 60744092 + 16.5 0.000 intron (NM_001330413, intron 5 of 25) intron (NM_001330413, intron 5 of 25) 66119 NM_001099432 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr17-756 chr17 29390429 29390673 + 16.5 0.000 promoter-TSS (NM_020791) promoter-TSS (NM_020791) -111 NR_039749 100616122 NR_039749 ENSG00000284162 MIR4523 - microRNA 4523 ncRNA chr2-1476 chr2 59301784 59302028 + 16.5 0.000 Intergenic Intergenic 84198 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA chr9-1214 chr9 68999696 68999940 + 16.5 0.000 intron (NM_003558, intron 15 of 15) intron (NM_003558, intron 15 of 15) 14305 NM_002732 5568 Hs.158029 NM_002732 ENSG00000165059 PRKACG BDPLT19|KAPG|PKACg protein kinase cAMP-activated catalytic subunit gamma protein-coding chr4-874 chr4 995588 995832 + 16.5 0.000 intron (NM_000203, intron 2 of 13) intron (NM_000203, intron 2 of 13) -2306 NM_022042 10861 Hs.658244 NM_022042 ENSG00000145217 SLC26A1 CAON|EDM4|SAT-1|SAT1 solute carrier family 26 member 1 protein-coding chr1-1268 chr1 9519585 9519829 + 16.5 0.000 Intergenic Intergenic -19758 NM_032315 84275 Hs.568613 NM_032315 ENSG00000171612 SLC25A33 BMSC-MCP|PNC1 solute carrier family 25 member 33 protein-coding chr5-928 chr5 138277808 138278052 + 16.5 0.000 Intergenic MSTB|LTR|ERVL-MaLR -3309 NM_001496 2676 Hs.58042 NM_001496 ENSG00000146013 GFRA3 GDNFR3 GDNF family receptor alpha 3 protein-coding chr13-500 chr13 85052127 85052371 + 16.5 0.000 Intergenic Intergenic 95808 NR_126383 104355140 NR_126383 ENSG00000226370 LINC00375 - long intergenic non-protein coding RNA 375 ncRNA chr1-1314 chr1 33080885 33081129 + 16.5 0.000 promoter-TSS (NR_146648) promoter-TSS (NR_146648) -146 NM_001301824 113451 Hs.101807 NM_052998 ENSG00000142920 AZIN2 ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp antizyme inhibitor 2 protein-coding chr12-861 chr12 77062893 77063137 + 16.5 0.000 intron (NM_203394, intron 2 of 12) MER44C|DNA|TcMar-Tigger 2554 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding chr7-1022 chr7 129167019 129167263 + 16.5 0.000 intron (NM_178562, intron 6 of 7) L1PA13|LINE|L1 -21492 NM_005631 6608 Hs.437846 NM_005631 ENSG00000128602 SMO CRJS|FZD11|Gx|SMOH smoothened, frizzled class receptor protein-coding chrX-448 chrX 45741585 45741829 + 16.5 0.000 Intergenic MLT1A1|LTR|ERVL-MaLR 4559 NR_029635 407006 NR_029635 ENSG00000207870 MIR221 MIRN221|miRNA221|mir-221 microRNA 221 ncRNA chr2-1586 chr2 240626602 240626846 + 16.5 0.000 intron (NM_005301, intron 1 of 1) intron (NM_005301, intron 1 of 1) 1479 NM_005301 2859 Hs.112218 NM_005301 ENSG00000178623 GPR35 - G protein-coupled receptor 35 protein-coding chr11-1544 chr11 66324767 66325011 + 16.5 0.000 Intergenic Intergenic -7845 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding chr8-219 chr8 143976592 143976836 + 16.5 0.000 promoter-TSS (NM_000445) promoter-TSS (NM_000445) 31 NM_000445 5339 Hs.434248 NM_000445 ENSG00000178209 PLEC EBS1|EBSMD|EBSND|EBSO|EBSOG|EBSPA|HD1|LGMD2Q|LGMDR17|PCN|PLEC1|PLEC1b|PLTN plectin protein-coding chr17-1250 chr17 15828795 15829039 + 16.5 0.000 Intergenic Intergenic -11175 NR_110839 101928567 Hs.569757 NR_110839 ENSG00000237057 LINC02087 - long intergenic non-protein coding RNA 2087 ncRNA chr7-587 chr7 101414272 101414516 + 16.5 0.000 intron (NM_133457, intron 1 of 12) (CTCT)n|Simple_repeat|Simple_repeat 51519 NM_001278563 136227 Hs.654854 NM_133457 ENSG00000160963 COL26A1 EMI6|EMID2|EMU2|SH2B collagen type XXVI alpha 1 chain protein-coding chr10-304 chr10 130790849 130791093 + 16.5 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 171697 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr15-614 chr15 34810719 34810963 + 16.5 0.000 non-coding (NR_120329, exon 3 of 3) non-coding (NR_120329, exon 3 of 3) -15292 NM_005159 70 Hs.118127 NM_005159 ENSG00000159251 ACTC1 ACTC|ASD5|CMD1R|CMH11|LVNC4 actin alpha cardiac muscle 1 protein-coding chr7-465 chr7 55065653 55065897 + 16.5 0.000 intron (NM_001346941, intron 1 of 21) intron (NM_001346941, intron 1 of 21) -44064 NM_001346900 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr21-112 chr21 46457997 46458241 + 16.5 0.000 promoter-TSS (NM_206890) promoter-TSS (NM_206890) -772 NM_015151 23181 Hs.189585 NM_015151 ENSG00000160305 DIP2A C21orf106|DIP2 disco interacting protein 2 homolog A protein-coding chr6-851 chr6 132538484 132538728 + 16.5 0.000 exon (NM_175057, exon 1 of 1) exon (NM_175057, exon 1 of 1) 318 NM_175057 134860 Hs.434116 NM_175057 ENSG00000237110 TAAR9 TA3|TAR3|TAR9|TRAR3 trace amine associated receptor 9 (gene/pseudogene) protein-coding chr1-668 chr1 245156534 245156778 + 16.5 0.000 exon (NM_018012, exon 2 of 15) exon (NM_018012, exon 2 of 15) 1671 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr1-2091 chr1 169367792 169368036 + 16.5 0.000 promoter-TSS (NM_013330) promoter-TSS (NM_013330) 35 NM_003666 8548 Hs.130746 NM_003666 ENSG00000117475 BLZF1 GOLGIN-45|JEM-1|JEM-1s|JEM1 basic leucine zipper nuclear factor 1 protein-coding chr19-1014 chr19 49475356 49475600 + 16.5 0.000 intron (NM_001459, intron 2 of 8) intron (NM_001459, intron 2 of 8) 892 NM_001204503 2323 Hs.428 NM_001459 ENSG00000090554 FLT3LG FL|FLG3L|FLT3L fms related tyrosine kinase 3 ligand protein-coding chr12-1046 chr12 6961918 6962162 + 16.5 0.000 TTS (NM_080549) TTS (NM_080549) -1205 NR_135032 105369635 Hs.744442 NR_135032 ENSG00000257084 MIR200CHG U47924.27 MIR200C and MIR141 host gene ncRNA chr5-698 chr5 156411480 156411724 + 16.5 0.000 intron (NM_001128209, intron 2 of 7) MIRb|SINE|MIR 84438 NM_001128209 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding chr12-919 chr12 132411014 132411258 + 16.5 0.000 Intergenic MER5B|DNA|hAT-Charlie -79015 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr9-1234 chr9 84187198 84187442 + 16.5 0.000 Intergenic Tigger1|DNA|TcMar-Tigger 123877 NR_110995 101927575 Hs.459826 NR_110995 ENSG00000227463 LOC101927575 - uncharacterized LOC101927575 ncRNA chr3-508 chr3 195259976 195260220 + 16.5 0.000 intron (NM_152531, intron 1 of 3) CpG 11061 NM_152531 152002 Hs.478741 NM_152531 ENSG00000173950 XXYLT1 C3orf21 xyloside xylosyltransferase 1 protein-coding chr11-728 chr11 61732631 61732875 + 16.5 0.000 intron (NM_006133, intron 9 of 19) intron (NM_006133, intron 9 of 19) -19883 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr12-996 chr12 110546422 110546666 + 16.5 0.000 intron (NM_139283, intron 2 of 5) intron (NM_139283, intron 2 of 5) 36774 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding chr8-607 chr8 23346250 23346494 + 16.5 0.000 intron (NM_002318, intron 3 of 13) intron (NM_002318, intron 3 of 13) 10164 NR_038323 100507156 Hs.661130 NR_038323 ENSG00000253837 LOC100507156 - uncharacterized LOC100507156 ncRNA chr15-373 chr15 55587646 55587890 + 16.5 0.000 intron (NM_015617, intron 1 of 2) CpG 577 NM_001367806 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chrX-299 chrX 52565566 52565810 + 16.5 0.000 Intergenic MER68-int|LTR|ERVL -48467 NM_001097604 653067 Hs.112208 NM_020411 ENSG00000204382 XAGE1B CT12.1|CT12.1C|CT12.1D|CT12.1E|CT12.1b|CTP9|GAGED2|XAGE-1|XAGE1|XAGE1C|XAGE1D|XAGE1E X antigen family member 1B protein-coding chr2-1164 chr2 231687088 231687332 + 16.5 0.000 Intergenic Intergenic -21315 NM_001099285 5757 Hs.459927 NM_002823 ENSG00000187514 PTMA TMSA prothymosin alpha protein-coding chr3-890 chr3 175743869 175744113 + 16.5 0.000 intron (NM_207015, intron 12 of 13) intron (NM_207015, intron 12 of 13) 32342 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr3-1460 chr3 162217562 162217806 + 16.3 0.000 Intergenic L1MD2|LINE|L1 720876 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr10-1249 chr10 99451145 99451389 + 16.3 0.000 Intergenic Intergenic -20643 NM_002079 2805 Hs.500756 NM_002079 ENSG00000120053 GOT1 AST1|ASTQTL1|GIG18|cAspAT|cCAT glutamic-oxaloacetic transaminase 1 protein-coding chr15-571 chr15 64891919 64892163 + 16.3 0.000 Intergenic MIR3|SINE|MIR -19861 NM_182703 348094 Hs.207157 NM_182703 ENSG00000166839 ANKDD1A - ankyrin repeat and death domain containing 1A protein-coding chr3-1342 chr3 73767089 73767333 + 16.3 0.000 Intergenic MER121|DNA|hAT? -42033 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr2-594 chr2 26284244 26284488 + 16.3 0.000 intron (NM_001281512, intron 12 of 14) intron (NM_001281512, intron 12 of 14) 34683 NM_001145168 165082 Hs.631878 NM_153835 ENSG00000173567 ADGRF3 GPR113|PGR23 adhesion G protein-coupled receptor F3 protein-coding chr9-1146 chr9 136697282 136697526 + 16.3 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -9947 NM_006412 10555 Hs.320151 NM_006412 ENSG00000169692 AGPAT2 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta 1-acylglycerol-3-phosphate O-acyltransferase 2 protein-coding chr12-531 chr12 64610122 64610366 + 16.3 0.000 promoter-TSS (NM_178169) promoter-TSS (NM_178169) -251 NR_040718 283349 Hs.643605 NM_178169 ENSG00000153179 RASSF3 RASSF5 Ras association domain family member 3 protein-coding chr9-1185 chr9 22030260 22030504 + 16.3 0.000 intron (NR_047532, intron 2 of 13) intron (NR_047532, intron 2 of 13) -21069 NM_078487 1030 Hs.72901 NM_004936 ENSG00000147883 CDKN2B CDK4I|INK4B|MTS2|P15|TP15|p15INK4b cyclin dependent kinase inhibitor 2B protein-coding chr4-954 chr4 40550949 40551193 + 16.3 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) -35086 NM_019027 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chrY-12 chrY 11322494 11322738 + 16.3 0.000 Intergenic CpG 1098974 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr5-856 chr5 181247047 181247291 + 16.3 0.000 non-coding (NR_109909, exon 2 of 3) non-coding (NR_109909, exon 2 of 3) 628 NR_109909 101928649 Hs.723307 NR_109909 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA chr12-713 chr12 131919730 131919974 + 16.3 0.000 intron (NM_003565, intron 25 of 27) intron (NM_003565, intron 25 of 27) -9424 NM_001002020 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr13-462 chr13 45194451 45194695 + 16.3 0.000 5' UTR (NM_198404, exon 2 of 2) 5' UTR (NM_198404, exon 2 of 2) 6472 NM_198404 386618 Hs.23406 NM_198404 ENSG00000180332 KCTD4 bA321C24.3 potassium channel tetramerization domain containing 4 protein-coding chr9-358 chr9 87725964 87726208 + 16.3 0.000 promoter-TSS (NM_001257973) promoter-TSS (NM_001257973) -33 NM_145918 1514 Hs.731507 NM_001912 ENSG00000135047 CTSL CATL|CTSL1|MEP cathepsin L protein-coding chr18-211 chr18 80147829 80148073 + 16.3 0.000 promoter-TSS (NR_028339) promoter-TSS (NR_028339) 27 NR_028339 100130522 Hs.352602 NM_001145731 ENSG00000267270 PARD6G-AS1 - PARD6G antisense RNA 1 ncRNA chr7-833 chr7 44150106 44150350 + 16.3 0.000 intron (NM_033507, intron 4 of 9) intron (NM_033507, intron 4 of 9) -3595 NM_001354801 2645 Hs.1270 NM_000162 ENSG00000106633 GCK FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2 glucokinase protein-coding chr5-195 chr5 174724351 174724595 + 16.3 0.000 promoter-TSS (NM_001363626) promoter-TSS (NM_001363626) -109 NM_002449 4488 Hs.89404 NM_002449 ENSG00000120149 MSX2 CRS2|FPP|HOX8|MSH|PFM|PFM1 msh homeobox 2 protein-coding chr4-807 chr4 23710679 23710923 + 16.3 0.000 Intergenic Intergenic 170491 NM_001330753 10891 Hs.527078 NM_013261 ENSG00000109819 PPARGC1A LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1 PPARG coactivator 1 alpha protein-coding chr3-1334 chr3 66798247 66798491 + 16.3 0.000 Intergenic Intergenic -60033 NR_135533 105377143 Hs.553944 NR_135533 LOC105377143 - uncharacterized LOC105377143 ncRNA chr3-442 chr3 45593758 45594002 + 16.3 0.000 promoter-TSS (NM_014240) promoter-TSS (NM_014240) -871 NM_014240 8994 Hs.193370 NM_014240 ENSG00000144791 LIMD1 - LIM domains containing 1 protein-coding chr19-949 chr19 14502669 14502913 + 16.3 0.000 Intergenic Intergenic -6642 NM_202494 10755 Hs.655012 NM_005716 ENSG00000123159 GIPC1 C19orf3|GIPC|GLUT1CBP|Hs.6454|IIP-1|NIP|RGS19IP1|SEMCAP|SYNECTIIN|SYNECTIN|TIP-2 GIPC PDZ domain containing family member 1 protein-coding chr10-1202 chr10 79203261 79203505 + 16.3 0.000 intron (NM_020338, intron 5 of 24) intron (NM_020338, intron 5 of 24) 134417 NM_020338 57178 Hs.193118 NM_020338 ENSG00000108175 ZMIZ1 MIZ|RAI17|TRAFIP10|ZIMP10 zinc finger MIZ-type containing 1 protein-coding chr1-1503 chr1 31758564 31758808 + 16.3 0.000 promoter-TSS (NR_036216) promoter-TSS (NR_036216) 49 NR_036216 100423028 NR_036216 ENSG00000266580 MIR4254 - microRNA 4254 ncRNA chr6-195 chr6 44004413 44004657 + 16.3 0.000 promoter-TSS (NR_125865) promoter-TSS (NR_125865) -885 NR_125865 101929705 Hs.670378 NR_125864 ENSG00000237686 LOC101929705 - uncharacterized LOC101929705 ncRNA chr17-843 chr17 8189139 8189383 + 16.3 0.000 exon (NM_017622, exon 1 of 1) exon (NM_017622, exon 1 of 1) 919 NM_017622 54785 Hs.129563 NM_017622 ENSG00000196544 BORCS6 C17orf59|PRO2472 BLOC-1 related complex subunit 6 protein-coding chr1-631 chr1 6602630 6602874 + 16.3 0.000 exon (NM_014851, exon 1 of 4) exon (NM_014851, exon 1 of 4) 117 NM_001324309 9903 Hs.7764 NM_014851 ENSG00000162413 KLHL21 - kelch like family member 21 protein-coding chr1-2612 chr1 203034129 203034373 + 16.3 0.000 intron (NM_001304331, intron 1 of 29) intron (NM_001304331, intron 1 of 29) 7760 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr11-757 chr11 85941503 85941747 + 16.3 0.000 Intergenic HERVL18-int|LTR|ERVL 86524 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr11-879 chr11 45662975 45663219 + 16.3 0.000 intron (NM_003654, intron 1 of 3) intron (NM_003654, intron 1 of 3) 2525 NM_003654 8534 Hs.104576 NM_003654 ENSG00000175264 CHST1 C6ST|GST-1|KS6ST|KSGal6ST|KSST carbohydrate sulfotransferase 1 protein-coding chr8-986 chr8 141800792 141801036 + 16.3 0.000 Intergenic Intergenic -14601 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr6-282 chr6 87155261 87155505 + 16.3 0.000 promoter-TSS (NM_001351444) promoter-TSS (NM_001351444) -182 NM_001351444 23036 Hs.444800 NM_015021 ENSG00000188994 ZNF292 Nbla00365|ZFP292|ZN-16|Zn-15|bA393I2.3 zinc finger protein 292 protein-coding chr21-110 chr21 45912668 45912912 + 16.3 0.000 intron (NM_001130141, intron 7 of 12) intron (NM_001130141, intron 7 of 12) -60180 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr13-281 chr13 27006576 27006820 + 16.3 0.000 Intergenic Intergenic -118835 NR_046547 100874070 Hs.524923 NR_046547 USP12-AS1 - USP12 antisense RNA 1 ncRNA chr12-939 chr12 15780776 15781020 + 16.3 0.000 intron (NM_004447, intron 1 of 20) intron (NM_004447, intron 1 of 20) 8490 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr1-1616 chr1 1426028 1426272 + 16.3 0.000 promoter-TSS (NM_001146685) promoter-TSS (NM_001146685) 22 NM_001146685 643965 Hs.729765 NM_001146685 ENSG00000205116 TMEM88B - transmembrane protein 88B protein-coding chr11-847 chr11 1224609 1224853 + 16.3 0.000 intron (NM_002458, intron 1 of 48) intron (NM_002458, intron 1 of 48) 1665 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr6-790 chr6 35241745 35241989 + 16.3 0.000 exon (NM_152753, exon 12 of 22) exon (NM_152753, exon 12 of 22) -17868 NM_001292032 7629 Hs.388024 NM_003427 ENSG00000065029 ZNF76 D6S229E|ZNF523|Zfp523 zinc finger protein 76 protein-coding chr15-354 chr15 42086991 42087235 + 16.3 0.000 intron (NM_178034, intron 3 of 19) MIRb|SINE|MIR 7449 NM_178034 283748 Hs.380225 NM_178034 ENSG00000159337 PLA2G4D cPLA2delta phospholipase A2 group IVD protein-coding chr22-745 chr22 50047485 50047729 + 16.3 0.000 intron (NM_001350317, intron 5 of 13) intron (NM_001350317, intron 5 of 13) 10620 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr10-657 chr10 81988900 81989144 + 16.3 0.000 intron (NR_163253, intron 2 of 10) L2|LINE|L2 111335 NR_163252 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding chr16-580 chr16 54931163 54931407 + 16.3 0.000 promoter-TSS (NM_001252197) promoter-TSS (NM_001252197) 86 NM_001252197 10265 Hs.435730 NM_005853 ENSG00000176842 IRX5 HMMS|IRX-2a|IRXB2 iroquois homeobox 5 protein-coding chr6-886 chr6 2103911 2104155 + 16.3 0.000 intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 71958 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding chr12-868 chr12 89353820 89354064 + 16.3 0.000 Intergenic CpG-5829 -1441 NM_001946 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding chr10-764 chr10 132141658 132141902 + 16.3 0.000 intron (NM_001323086, intron 10 of 23) intron (NM_001323086, intron 10 of 23) -45168 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr6-541 chr6 113376338 113376582 + 16.3 0.000 Intergenic Eulor9C|DNA|DNA 56987 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr10-928 chr10 119849433 119849677 + 16.3 0.000 exon (NM_001256378, exon 7 of 16) exon (NM_001256378, exon 7 of 16) 23328 NM_024834 79892 Hs.124246 NM_024834 ENSG00000197771 MCMBP C10orf119|MCM-BP minichromosome maintenance complex binding protein protein-coding chr1-2145 chr1 244730424 244730668 + 16.3 0.000 Intergenic CpG 77420 NM_001297746 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding chr1-2425 chr1 85440671 85440915 + 16.3 0.000 intron (NM_001134445, intron 2 of 6) intron (NM_001134445, intron 2 of 6) 24366 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr7-1301 chr7 55505118 55505362 + 16.3 0.000 intron (NM_001321242, intron 2 of 4) intron (NM_001321242, intron 2 of 4) 21640 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding chr2-1901 chr2 200039932 200040176 + 16.3 0.000 Intergenic Intergenic -84563 NR_004862 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding chr20-364 chr20 13220193 13220437 + 16.3 0.000 promoter-TSS (NM_080826) promoter-TSS (NM_080826) -959 NM_080826 140862 Hs.559353 NM_080826 ENSG00000101230 ISM1 C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1 isthmin 1 protein-coding chr2-1911 chr2 208369739 208369983 + 16.3 0.000 intron (NM_001309516, intron 1 of 12) MER34-int|LTR|ERV1 10169 NM_001309516 5746 Hs.570296 NM_005048 ENSG00000144407 PTH2R PTHR2 parathyroid hormone 2 receptor protein-coding chr12-736 chr12 42144047 42144291 + 16.3 0.000 intron (NM_173601, intron 1 of 7) intron (NM_173601, intron 1 of 7) 705 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding chr3-761 chr3 115658283 115658527 + 16.3 0.000 intron (NM_002045, intron 1 of 2) intron (NM_002045, intron 1 of 2) 34895 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding chr1-2072 chr1 155084587 155084831 + 16.3 0.000 intron (NM_004952, intron 1 of 4) intron (NM_004952, intron 1 of 4) 5872 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr6-80 chr6 113854884 113855128 + 16.3 0.000 Intergenic Intergenic -2339 NM_002356 4082 Hs.519909 NM_002356 ENSG00000277443 MARCKS 80K-L|MACS|PKCSL|PRKCSL myristoylated alanine rich protein kinase C substrate protein-coding GL000216.2-11 GL000216.2 156804 157048 + 16.3 0.000 NA NA NA NA chr1-2625 chr1 206521669 206521913 + 16.3 0.000 intron (NM_182664, intron 1 of 4) intron (NM_182664, intron 1 of 4) 14260 NM_182664 83593 Hs.497579 NM_031437 ENSG00000266094 RASSF5 Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3 Ras association domain family member 5 protein-coding chr10-709 chr10 133258945 133259189 + 16.3 0.000 Intergenic Intergenic -11182 NR_108079 101927671 Hs.741766 NR_108078 ENSG00000166917 MIR202HG - MIR202 host gene ncRNA chr10-1028 chr10 99621455 99621699 + 16.3 0.000 Intergenic CpG-3218 -1138 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding chr7-159 chr7 131556694 131556938 + 16.3 0.000 promoter-TSS (NM_005397) promoter-TSS (NM_005397) -188 NM_005397 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding chr2-1330 chr2 169463431 169463675 + 16.3 0.000 Intergenic Intergenic -15941 NM_152384 129880 Hs.233398 NM_152384 ENSG00000163093 BBS5 - Bardet-Biedl syndrome 5 protein-coding chr20-650 chr20 62358265 62358509 + 16.3 0.000 intron (NM_005560, intron 2 of 79) intron (NM_005560, intron 2 of 79) 5377 NR_109924 101928158 Hs.473256 NR_109922 ENSG00000228812 LAMA5-AS1 - LAMA5 antisense RNA 1 ncRNA chr11-1168 chr11 72721396 72721640 + 16.3 0.000 intron (NM_001040118, intron 3 of 34) intron (NM_001040118, intron 3 of 34) 822 NM_001369489 116985 Hs.503165 NM_015242 ENSG00000186635 ARAP1 CENTD2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 protein-coding chr3-857 chr3 117548080 117548324 + 16.3 0.000 Intergenic Intergenic 142723 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA chr12-1151 chr12 62813176 62813420 + 16.3 0.000 intron (NM_020700, intron 2 of 9) intron (NM_020700, intron 2 of 9) 121852 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr17-1438 chr17 80475556 80475800 + 16.3 0.000 exon (NM_002522, exon 2 of 5) exon (NM_002522, exon 2 of 5) 929 NM_002522 4884 Hs.514556 NM_002522 ENSG00000171246 NPTX1 NP1 neuronal pentraxin 1 protein-coding chr4-609 chr4 109433435 109433679 + 16.3 0.000 promoter-TSS (NM_001318085) promoter-TSS (NM_001318085) -158 NM_001318085 10427 Hs.292472 NM_006323 ENSG00000138802 SEC24B SEC24 SEC24 homolog B, COPII coat complex component protein-coding chr9-998 chr9 133755364 133755608 + 16.3 0.000 Intergenic MER54A|LTR|ERVL -15531 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr6-364 chr6 150866809 150867053 + 16.3 0.000 non-coding (NR_146720, exon 1 of 29) non-coding (NR_146720, exon 1 of 29) 445 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr4-406 chr4 40587774 40588018 + 16.3 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 41968 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chrX-451 chrX 46714115 46714359 + 16.3 0.000 intron (NM_001257291, intron 1 of 16) MIRb|SINE|MIR 44881 NM_001257291 84679 Hs.91389 NM_032591 ENSG00000065923 SLC9A7 MRX108|NHE-7|NHE7|SLC9A6 solute carrier family 9 member A7 protein-coding chr7-1206 chr7 4785408 4785652 + 16.3 0.000 exon (NM_014855, exon 9 of 17) exon (NM_014855, exon 9 of 17) 3109 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr1-2476 chr1 111592574 111592818 + 16.3 0.000 intron (NM_001370216, intron 1 of 7) intron (NM_001370216, intron 1 of 7) 15622 NR_034126 100129269 Hs.689728 NR_034126 LINC01160 - long intergenic non-protein coding RNA 1160 ncRNA chr10-1118 chr10 29276454 29276698 + 16.3 0.000 Intergenic Intergenic -12494 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr15-324 chr15 58749024 58749268 + 16.3 0.000 intron (NM_001320570, intron 1 of 14) CpG 561 NM_001110 102 Hs.172028 NM_001110 ENSG00000137845 ADAM10 AD10|AD18|CD156c|CDw156|HsT18717|MADM|RAK|kuz ADAM metallopeptidase domain 10 protein-coding chr1-1391 chr1 150255715 150255959 + 16.3 0.000 Intergenic Intergenic -1937 NM_012113 23632 Hs.528988 NM_012113 ENSG00000118298 CA14 CAXiV carbonic anhydrase 14 protein-coding chr16-692 chr16 89904455 89904699 + 16.3 0.000 intron (NM_014972, intron 13 of 17) AluJb|SINE|Alu -13302 NM_002386 4157 Hs.513829 NM_002386 ENSG00000258839 MC1R CMM5|MSH-R|SHEP2 melanocortin 1 receptor protein-coding chr10-1244 chr10 97731794 97732038 + 16.3 0.000 Intergenic Intergenic -5205 NM_001174119 118813 Hs.744075 NM_144588 ENSG00000155256 ZFYVE27 PROTRUDIN|SPG33 zinc finger FYVE-type containing 27 protein-coding chr2-882 chr2 235666477 235666721 + 16.3 0.000 intron (NM_001037131, intron 1 of 17) intron (NM_001037131, intron 1 of 17) -148678 NR_146582 27321 NR_146582 TNRC17 CAGL234 trinucleotide repeat containing 17 ncRNA chr3-1221 chr3 12901006 12901250 + 16.3 0.000 exon (NM_001134382, exon 14 of 14) exon (NM_001134382, exon 14 of 14) -15917 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr13-464 chr13 45946825 45947069 + 16.3 0.000 Intergenic Intergenic -95194 NM_198849 283514 Hs.368483 NM_198849 ENSG00000215475 SIAH3 - siah E3 ubiquitin protein ligase family member 3 protein-coding chr2-1902 chr2 200765535 200765779 + 16.3 0.000 intron (NR_135012, intron 21 of 30) MER21C|LTR|ERVL -30480 NR_037886 100507140 Hs.382116 NR_037886 ENSG00000237166 LINC01792 - long intergenic non-protein coding RNA 1792 ncRNA chr3-1343 chr3 74142852 74143096 + 16.3 0.000 Intergenic AluJr|SINE|Alu 333730 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA chr11-1166 chr11 72278943 72279187 + 16.3 0.000 Intergenic L1MB3|LINE|L1 -34889 NM_005169 401 Hs.731115 NM_005169 ENSG00000165462 PHOX2A ARIX|CFEOM2|FEOM2|NCAM2|PMX2A paired like homeobox 2A protein-coding chr9-1025 chr9 136254754 136254998 + 16.3 0.000 Intergenic Intergenic -9035 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr8-915 chr8 96164349 96164593 + 16.3 0.000 Intergenic Intergenic -3665 NM_001001557 392255 Hs.492277 NM_001001557 ENSG00000156466 GDF6 BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1|SYNS4 growth differentiation factor 6 protein-coding chr15-623 chr15 40764287 40764531 + 16.3 0.000 TTS (NM_018163) TTS (NM_018163) 341 NM_005258 2644 Hs.631717 NM_005258 ENSG00000137880 GCHFR GFRP|HsT16933|P35 GTP cyclohydrolase I feedback regulator protein-coding chr6-1091 chr6 150596075 150596319 + 16.3 0.000 Intergenic Intergenic -3688 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr14-516 chr14 38209876 38210120 + 16.3 0.000 exon (NM_001049, exon 3 of 3) exon (NM_001049, exon 3 of 3) 2094 NM_001049 6751 Hs.248160 NM_001049 ENSG00000139874 SSTR1 SRIF-2|SS-1-R|SS1-R|SS1R somatostatin receptor 1 protein-coding chr14-765 chr14 88831504 88831748 + 16.3 0.000 intron (NR_159362, intron 1 of 14) MIR|SINE|MIR 6975 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr5-819 chr5 149320928 149321172 + 16.3 0.000 intron (NM_152406, intron 14 of 18) intron (NM_152406, intron 14 of 18) -24449 NM_152407 134266 Hs.511816 NM_152407 ENSG00000164284 GRPEL2 Mt-GrpE#2 GrpE like 2, mitochondrial protein-coding chr13-378 chr13 30865440 30865684 + 16.3 0.000 Intergenic Intergenic -17000 NR_103813 440132 Hs.729493 NR_103813 ENSG00000236094 LINC00545 - long intergenic non-protein coding RNA 545 ncRNA chr12-873 chr12 93943895 93944139 + 16.3 0.000 promoter-TSS (NR_135017) promoter-TSS (NR_135017) -411 NR_135017 105369911 Hs.577495 NR_135017 ENSG00000257283 LOC105369911 - uncharacterized LOC105369911 ncRNA chr14-127 chr14 60649394 60649638 + 16.3 0.000 promoter-TSS (NM_005982) promoter-TSS (NM_005982) -39 NM_005982 6495 Hs.633506 NM_005982 ENSG00000126778 SIX1 BOS3|DFNA23|TIP39 SIX homeobox 1 protein-coding chr11-1515 chr11 63614237 63614481 + 16.3 0.000 promoter-TSS (NM_007069) promoter-TSS (NM_007069) 78 NM_007069 11145 Hs.502775 NM_007069 ENSG00000176485 PLAAT3 AdPLA|H-REV107|H-REV107-1|HRASLS3|HREV107|HREV107-1|HREV107-3|HRSL3|PLA2G16|PLAAT-3 phospholipase A and acyltransferase 3 protein-coding chr17-1128 chr17 39002333 39002577 + 16.3 0.000 Intergenic L2c|LINE|L2 24655 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA chrX-361 chrX 18994810 18995054 + 16.3 0.000 exon (NM_001184837, exon 26 of 27) exon (NM_001184837, exon 26 of 27) -10818 NM_000292 5256 Hs.54941 NM_000292 ENSG00000044446 PHKA2 GSD9A|PHK|PYK|PYKL|XLG|XLG2 phosphorylase kinase regulatory subunit alpha 2 protein-coding chr15-642 chr15 48855648 48855892 + 16.3 0.000 intron (NM_203349, intron 8 of 11) intron (NM_203349, intron 8 of 11) -22364 NM_014335 23741 Hs.255973 NM_014335 ENSG00000255302 EID1 C15orf3|CRI1|EID-1|IRO45620|PNAS-22|PTD014|RBP21 EP300 interacting inhibitor of differentiation 1 protein-coding chr9-1380 chr9 133980812 133981056 + 16.3 0.000 intron (NM_001134398, intron 1 of 29) L2b|LINE|L2 11390 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr3-999 chr3 119235203 119235447 + 16.3 0.000 intron (NM_212543, intron 2 of 8) intron (NM_212543, intron 2 of 8) 5553 NM_003778 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chr13-487 chr13 75359252 75359496 + 16.3 0.000 intron (NM_001286658, intron 3 of 19) intron (NM_001286658, intron 3 of 19) 118786 NR_132375 106144536 Hs.591226 NR_132375 LINC01078 - long intergenic non-protein coding RNA 1078 ncRNA chr2-1533 chr2 172442052 172442296 + 16.3 0.000 intron (NM_001365530, intron 1 of 25) intron (NM_001365530, intron 1 of 25) 14588 NM_001365529 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding chr3-1049 chr3 169769457 169769701 + 16.3 0.000 promoter-TSS (NM_032487) promoter-TSS (NM_032487) -18 NM_032487 84517 Hs.135411 NM_032487 ENSG00000184378 ACTRT3 ARP-T3|ARPM1 actin related protein T3 protein-coding chr13-531 chr13 111461463 111461707 + 16.3 0.000 Intergenic Intergenic -134424 NR_135814 105370369 NR_135814 ENSG00000215881 LINC02337 - long intergenic non-protein coding RNA 2337 ncRNA chr13-511 chr13 98798882 98799126 + 16.3 0.000 intron (NM_001366682, intron 51 of 53) intron (NM_001366682, intron 51 of 53) -33080 NR_046663 100874096 Hs.578066 NR_046663 ENSG00000229918 DOCK9-AS1 - DOCK9 antisense RNA 1 ncRNA chr1-2360 chr1 42693132 42693376 + 16.3 0.000 intron (NM_004559, intron 2 of 7) intron (NM_004559, intron 2 of 7) 10118 NR_132737 4904 Hs.473583 NM_004559 ENSG00000065978 YBX1 BP-8|CBF-A|CSDA2|CSDB|DBPB|EFI-A|MDR-NF1|NSEP-1|NSEP1|YB-1|YB1 Y-box binding protein 1 protein-coding chr12-1116 chr12 53187690 53187934 + 16.3 0.000 3' UTR (NM_001004304, exon 7 of 7) 3' UTR (NM_001004304, exon 7 of 7) -6887 NM_001244705 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding chr1-2627 chr1 207698937 207699181 + 16.3 0.000 intron (NM_175710, intron 7 of 11) intron (NM_175710, intron 7 of 11) -52979 NM_002389 4179 Hs.510402 NM_002389 ENSG00000117335 CD46 AHUS2|MCP|MIC10|TLX|TRA2.10 CD46 molecule protein-coding chr2-1762 chr2 95544968 95545212 + 16.3 0.000 Intergenic SATR2|Satellite|Satellite -46911 NM_138800 129868 Hs.232026 NM_138800 ENSG00000144015 TRIM43 TRIM43A tripartite motif containing 43 protein-coding chr11-1264 chr11 17353493 17353737 + 16.3 0.000 intron (NM_001202439, intron 1 of 4) CpG 1815 NM_001202439 374383 Hs.146274 NM_001009913 ENSG00000188211 NCR3LG1 B7-H6|B7H6|DKFZp686O24166 natural killer cell cytotoxicity receptor 3 ligand 1 protein-coding chr4-851 chr4 149883925 149884169 + 16.3 0.000 Intergenic L2c|LINE|L2 -68204 NM_001363509 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding chr12-424 chr12 69585739 69585983 + 16.3 0.000 promoter-TSS (NM_001198842) promoter-TSS (NM_001198842) -28 NM_001198842 10576 Hs.189772 NM_006431 ENSG00000166226 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1 subunit 2 protein-coding chr10-779 chr10 3782898 3783142 + 16.3 0.000 intron (NR_027653, intron 1 of 3) intron (NR_027653, intron 1 of 3) 2189 NM_001300 1316 Hs.4055 NM_001300 ENSG00000067082 KLF6 BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 Kruppel like factor 6 protein-coding chr10-1326 chr10 126907758 126908002 + 16.3 0.000 intron (NM_001290223, intron 1 of 51) intron (NM_001290223, intron 1 of 51) 2471 NM_001380 1793 Hs.159195 NM_001380 ENSG00000150760 DOCK1 DOCK180|ced5 dedicator of cytokinesis 1 protein-coding chr1-2120 chr1 214416235 214416479 + 16.3 0.000 intron (NM_005401, intron 3 of 18) intron (NM_005401, intron 3 of 18) 135198 NM_020197 56950 Hs.66170 NM_020197 ENSG00000143499 SMYD2 HSKM-B|KMT3C|ZMYND14 SET and MYND domain containing 2 protein-coding chr8-301 chr8 92490834 92491078 + 16.3 0.000 Intergenic MLT1K|LTR|ERVL-MaLR 164538 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr20-537 chr20 11716228 11716472 + 16.3 0.000 Intergenic LTR16A1|LTR|ERVL 154365 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr17-1465 chr17 81928982 81929226 + 16.3 0.000 intron (NR_015454, intron 1 of 1) CpG-11919 1275 NR_015454 92659 Hs.336958 NR_015454 ENSG00000265688 MAFG-DT MAFG-AS1 MAFG divergent transcript ncRNA chr3-783 chr3 147298714 147298958 + 16.3 0.000 Intergenic UCON8|DNA|DNA 93594 NR_033119 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding chr8-938 chr8 109455497 109455741 + 16.3 0.000 intron (NM_177531, intron 45 of 77) intron (NM_177531, intron 45 of 77) -84081 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding chr7-1216 chr7 6260940 6261184 + 16.3 0.000 intron (NM_001367581, intron 1 of 13) L1MEg|LINE|L1 11562 NM_001367581 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr1-805 chr1 3470616 3470860 + 16.2 0.000 intron (NM_014448, intron 6 of 14) intron (NM_014448, intron 6 of 14) 16073 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr22-654 chr22 31271290 31271534 + 16.2 0.000 intron (NM_001031801, intron 11 of 14) intron (NM_001031801, intron 11 of 14) 21076 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr5-1113 chr5 133702639 133702883 + 16.2 0.000 Intergenic Intergenic -90220 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chrX-196 chrX 40013634 40013878 + 16.2 0.000 Intergenic CpG 83710 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr1-1577 chr1 202162137 202162381 + 16.2 0.000 promoter-TSS (NR_037663) promoter-TSS (NR_037663) -671 NR_037664 5778 Hs.402773 NM_002832 ENSG00000143851 PTPN7 BPTP-4|HEPTP|LC-PTP|LPTP|PTPNI protein tyrosine phosphatase non-receptor type 7 protein-coding chr1-1802 chr1 99970105 99970349 + 16.2 0.000 promoter-TSS (NM_001271685) promoter-TSS (NM_001271685) 231 NM_012243 23443 Hs.448979 NM_012243 ENSG00000117620 SLC35A3 AMRS solute carrier family 35 member A3 protein-coding chr17-1084 chr17 82429992 82430236 + 16.2 0.000 intron (NM_173620, intron 4 of 11) intron (NM_173620, intron 4 of 11) -11528 NR_033265 79701 Hs.187505 NM_024648 ENSG00000181396 OGFOD3 C17orf101 2-oxoglutarate and iron dependent oxygenase domain containing 3 protein-coding chr3-1362 chr3 106345371 106345615 + 16.2 0.000 Intergenic Intergenic -476092 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr11-1335 chr11 76007703 76007947 + 16.2 0.000 intron (NM_003369, intron 10 of 14) intron (NM_003369, intron 10 of 14) 192615 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr17-1328 chr17 46962259 46962503 + 16.2 0.000 intron (NM_001321133, intron 6 of 6) MLT1H2|LTR|ERVL-MaLR -10636 NR_049812 100847067 NR_049812 ENSG00000264999 MIR5089 - microRNA 5089 ncRNA chrY-2 chrY 1367424 1367668 + 16.2 0.000 intron (NM_002183, intron 9 of 11).2 CpG 24567 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr1-2095 chr1 176395964 176396208 + 16.2 0.000 Intergenic SVA_D|Retroposon|SVA -67089 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding chr15-107 chr15 34209971 34210215 + 16.2 0.000 promoter-TSS (NM_024713) promoter-TSS (NM_024713) 3 NM_024713 79768 Hs.633566 NM_024713 ENSG00000134152 KATNBL1 C15orf29 katanin regulatory subunit B1 like 1 protein-coding chrX-355 chrX 3271788 3272032 + 16.2 0.000 promoter-TSS (NR_038428) promoter-TSS (NR_038428) 90 NR_038428 100129464 Hs.187816 NR_038428 ENSG00000228459 LINC01546 CXorf28 long intergenic non-protein coding RNA 1546 ncRNA chr10-1142 chr10 43225007 43225251 + 16.2 0.000 intron (NM_145313, intron 1 of 12) intron (NM_145313, intron 1 of 12) 4610 NM_001282862 221002 Hs.125293 NM_145313 ENSG00000198915 RASGEF1A CG4853 RasGEF domain family member 1A protein-coding chr7-1452 chr7 155534455 155534699 + 16.2 0.000 promoter-TSS (NM_001103176) promoter-TSS (NM_001103176) -715 NR_163158 285888 Hs.146751 NM_001103176 ENSG00000146910 CNPY1 - canopy FGF signaling regulator 1 protein-coding chr17-1004 chr17 57899762 57900006 + 16.2 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 3505 NM_001292025 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr5-1006 chr5 33148247 33148491 + 16.2 0.000 Intergenic Intergenic -81366 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA chr1-1773 chr1 68069686 68069930 + 16.2 0.000 intron (NR_040077, intron 2 of 9) L1MC3|LINE|L1 -18177 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding chr17-1152 chr17 50798594 50798838 + 16.2 0.000 Intergenic Intergenic 30066 NR_107026 102466918 NR_107026 ENSG00000278672 MIR8059 hsa-mir-8059 microRNA 8059 ncRNA chr10-1032 chr10 101467377 101467621 + 16.2 0.000 intron (NM_003939, intron 2 of 13) intron (NM_003939, intron 2 of 13) 113334 NM_003939 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr9-525 chr9 94374369 94374613 + 16.2 0.000 promoter-TSS (NM_032558) promoter-TSS (NM_032558) -78 NM_032558 84641 Hs.555996 NM_032558 ENSG00000148110 MFSD14B HIATL1 major facilitator superfamily domain containing 14B protein-coding chr2-1099 chr2 74835236 74835480 + 16.2 0.000 intron (NM_000189, intron 1 of 17) CpG 2703 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding chr10-1119 chr10 29344575 29344819 + 16.2 0.000 Intergenic Intergenic 55627 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding chr2-1038 chr2 231452103 231452347 + 16.2 0.000 Intergenic Intergenic 3711 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr22-407 chr22 43186527 43186771 + 16.2 0.000 intron (NM_015140, intron 1 of 13) MIRb|SINE|MIR 485 NM_015140 23170 Hs.517670 NM_015140 ENSG00000100304 TTLL12 dJ526I14.2 tubulin tyrosine ligase like 12 protein-coding chr9-693 chr9 124852886 124853130 + 16.2 0.000 promoter-TSS (NM_001276374) promoter-TSS (NM_001276374) -409 NM_001276374 401551 Hs.343383 NM_001045476 ENSG00000136918 WDR38 - WD repeat domain 38 protein-coding chr17-884 chr17 75614033 75614277 + 16.2 0.000 intron (NM_001309242, intron 28 of 62) intron (NM_001309242, intron 28 of 62) -19279 NM_001162995 643008 Hs.528605 NM_001162995 ENSG00000204323 SMIM5 C17orf109|PP12104 small integral membrane protein 5 protein-coding chr12-712 chr12 131783791 131784035 + 16.2 0.000 intron (NM_004592, intron 14 of 17) intron (NM_004592, intron 14 of 17) -44480 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr7-920 chr7 19819842 19820086 + 16.2 0.000 Intergenic AluSq2|SINE|Alu -46347 NM_001366626 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding chr16-854 chr16 73047620 73047864 + 16.2 0.000 intron (NM_006885, intron 1 of 9) CpG 386 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr15-661 chr15 60972316 60972560 + 16.2 0.000 intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 256864 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr6-376 chr6 13574418 13574662 + 16.2 0.000 promoter-TSS (NM_031244) promoter-TSS (NM_031244) 11 NM_001193267 23408 Hs.567431 NM_012241 ENSG00000124523 SIRT5 SIR2L5 sirtuin 5 protein-coding chr20-289 chr20 4018430 4018674 + 16.2 0.000 Intergenic Intergenic -2994 NM_001134337 11237 Hs.547576 NM_007219 ENSG00000101236 RNF24 G1L ring finger protein 24 protein-coding chr11-930 chr11 75312072 75312316 + 16.2 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 22992 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chr2-1577 chr2 238127469 238127713 + 16.2 0.000 intron (NM_001308370, intron 1 of 3) intron (NM_001308370, intron 1 of 3) 201 NM_001308370 339768 Hs.127724 NM_194312 ENSG00000144488 ESPNL - espin like protein-coding chr1-2528 chr1 156623883 156624127 + 16.2 0.000 exon (NM_021817, exon 4 of 7) exon (NM_021817, exon 4 of 7) -2077 NR_135113 101928177 Hs.571810 NR_135113 LOC101928177 - uncharacterized LOC101928177 ncRNA chr17-1426 chr17 78416688 78416932 + 16.2 0.000 intron (NR_110602, intron 7 of 8) intron (NR_110602, intron 7 of 8) 38161 NR_110602 9489 Hs.654671 NM_024419 ENSG00000087157 PGS1 - phosphatidylglycerophosphate synthase 1 protein-coding chr11-1373 chr11 272343 272587 + 16.2 0.000 Intergenic Intergenic -5942 NM_001276700 171389 Hs.352611 NM_138329 ENSG00000174885 NLRP6 AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5 NLR family pyrin domain containing 6 protein-coding chr4-986 chr4 57233452 57233696 + 16.2 0.000 Intergenic Intergenic -123189 NM_001553 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding chr19-1161 chr19 3753898 3754142 + 16.2 0.000 exon (NM_004886, exon 5 of 11) exon (NM_004886, exon 5 of 11) 7672 NM_004886 9546 Hs.25527 NM_004886 ENSG00000011132 APBA3 MGC:15815|X11L2|mint3 amyloid beta precursor protein binding family A member 3 protein-coding chr19-739 chr19 16067301 16067545 + 16.2 0.000 promoter-TSS (NM_001145160) promoter-TSS (NM_001145160) -115 NM_001145160 7171 Hs.631618 NM_003290 ENSG00000167460 TPM4 HEL-S-108 tropomyosin 4 protein-coding chr3-1466 chr3 171165436 171165680 + 16.2 0.000 intron (NM_001161563, intron 10 of 31) intron (NM_001161563, intron 10 of 31) -58799 NR_030295 693154 NR_030295 ENSG00000207963 MIR569 MIRN569|hsa-mir-569 microRNA 569 ncRNA chr1-1778 chr1 78522640 78522884 + 16.2 0.000 intron (NM_001039585, intron 3 of 3) MER107|DNA|hAT-Charlie 31788 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding chr12-523 chr12 53059926 53060170 + 16.2 0.000 exon (NM_015319, exon 18 of 29) exon (NM_015319, exon 18 of 29) 3104 NR_106815 102466193 NR_106815 ENSG00000278108 MIR6757 hsa-mir-6757 microRNA 6757 ncRNA chr19-1108 chr19 45668962 45669206 + 16.2 0.000 intron (NM_001308418, intron 1 of 12) intron (NM_001308418, intron 1 of 12) 863 NM_000164 2696 Hs.251412 NM_000164 ENSG00000010310 GIPR PGQTL2 gastric inhibitory polypeptide receptor protein-coding chr17-1290 chr17 35148828 35149072 + 16.2 0.000 intron (NM_001033576, intron 2 of 19) intron (NM_001033576, intron 2 of 19) 686 NM_001308281 146862 Hs.379636 NM_173167 ENSG00000141161 UNC45B CMYA4|CTRCT43|SMUNC45|UNC-45B|UNC45 unc-45 myosin chaperone B protein-coding chr16-1059 chr16 6214432 6214676 + 16.2 0.000 intron (NM_018723, intron 1 of 15) G-rich|Low_complexity|Low_complexity 194851 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr22-660 chr22 32838182 32838426 + 16.2 0.000 intron (NM_000362, intron 1 of 4) intron (NM_000362, intron 1 of 4) 37488 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding chr1-2125 chr1 224593136 224593380 + 16.2 0.000 intron (NR_136294, intron 4 of 8) AluJb|SINE|Alu -23059 NM_001322305 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr7-994 chr7 100106522 100106766 + 16.2 0.000 TTS (NM_001365001) TTS (NM_001365001) -4704 NM_001278595 4176 Hs.438720 NM_005916 ENSG00000166508 MCM7 CDC47|MCM2|P1.1-MCM3|P1CDC47|P85MCM|PNAS146|PPP1R104 minichromosome maintenance complex component 7 protein-coding chr4-590 chr4 17511727 17511971 + 16.2 0.000 intron (NR_156494, intron 1 of 5) CpG 241 NM_000320 5860 Hs.75438 NM_000320 ENSG00000151552 QDPR DHPR|HDHPR|PKU2|SDR33C1 quinoid dihydropteridine reductase protein-coding chr8-582 chr8 127852166 127852410 + 16.2 0.000 intron (NR_003367, intron 1 of 8) intron (NR_003367, intron 1 of 8) 56326 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr14-311 chr14 29548964 29549208 + 16.2 0.000 Intergenic Intergenic 378010 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr19-370 chr19 16325307 16325551 + 16.2 0.000 exon (NM_016270, exon 2 of 3) exon (NM_016270, exon 2 of 3) 603 NM_016270 10365 Hs.685136 NM_016270 ENSG00000127528 KLF2 LKLF Kruppel like factor 2 protein-coding chr5-727 chr5 17157872 17158116 + 16.2 0.000 intron (NR_027253, intron 2 of 2) intron (NR_027253, intron 2 of 2) -2002 NR_162112 113218490 NR_162112 MIR10522 - microRNA 10522 ncRNA chr19-714 chr19 49150298 49150542 + 16.2 0.000 TTS (NM_002152) TTS (NM_002152) 4976 NM_002152 3270 Hs.436885 NM_002152 ENSG00000130528 HRC - histidine rich calcium binding protein protein-coding chr13-405 chr13 99464486 99464730 + 16.2 0.000 Intergenic Intergenic 34698 NR_110731 102725509 Hs.648968 NR_110731 LINC01232 TCONS_00021520 long intergenic non-protein coding RNA 1232 ncRNA chr4-470 chr4 119628691 119628935 + 16.2 0.000 promoter-TSS (NM_001083) promoter-TSS (NM_001083) -9 NM_001083 8654 Hs.647971 NM_001083 ENSG00000138735 PDE5A CGB-PDE|CN5A|PDE5 phosphodiesterase 5A protein-coding chr11-1260 chr11 13229996 13230240 + 16.2 0.000 Intergenic Intergenic -46534 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr16-1121 chr16 54027153 54027397 + 16.2 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) -12118 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr19-1293 chr19 52369714 52369958 + 16.2 0.000 promoter-TSS (NM_001145434) promoter-TSS (NM_001145434) -87 NM_001145434 400713 Hs.502314 NM_001145434 ENSG00000221923 ZNF880 - zinc finger protein 880 protein-coding chr9-1315 chr9 124292322 124292566 + 16.2 0.000 promoter-TSS (NM_001166169) promoter-TSS (NM_001166169) 24 NM_001166169 10783 Hs.197071 NM_014397 ENSG00000119408 NEK6 SID6-1512 NIMA related kinase 6 protein-coding chr1-2529 chr1 156749571 156749815 + 16.2 0.000 intron (NM_001319186, intron 1 of 5) intron (NM_001319186, intron 1 of 5) 1600 NM_001319188 3068 Hs.743948 NM_004494 ENSG00000143321 HDGF HMG1L2 heparin binding growth factor protein-coding chr20-452 chr20 58109463 58109707 + 16.2 0.000 Intergenic MLT1A0-int|LTR|ERVL-MaLR -41317 NM_178456 128602 Hs.43977 NM_178456 ENSG00000124237 C20orf85 LLC1|bA196N14.1 chromosome 20 open reading frame 85 protein-coding chr12-537 chr12 76879414 76879658 + 16.2 0.000 promoter-TSS (NM_001300965) promoter-TSS (NM_001300965) -517 NM_001300965 1466 Hs.530904 NM_001321 ENSG00000175183 CSRP2 CRP2|LMO5|SmLIM cysteine and glycine rich protein 2 protein-coding chr19-958 chr19 16584415 16584659 + 16.2 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -12122 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr19-1261 chr19 44753253 44753497 + 16.2 0.000 intron (NM_005178, intron 2 of 8) intron (NM_005178, intron 2 of 8) 4667 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr6-868 chr6 156645122 156645366 + 16.2 0.000 Intergenic Intergenic -132611 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding chr5-1030 chr5 53479709 53479953 + 16.2 0.000 promoter-TSS (NM_006350) promoter-TSS (NM_006350) -798 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding chr11-1171 chr11 73330679 73330923 + 16.2 0.000 intron (NM_014786, intron 1 of 20) intron (NM_014786, intron 1 of 20) -21440 NR_147696 100287837 Hs.573929 NR_147696 ENSG00000257038 LOC100287837 - uncharacterized LOC100287837 ncRNA chrX-538 chrX 129262418 129262662 + 16.2 0.000 Intergenic Intergenic 260950 NM_001282874 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr13-170 chr13 29491279 29491523 + 16.2 0.000 intron (NM_015233, intron 4 of 8) (GT)n|Simple_repeat|Simple_repeat -3651 NR_046378 100874107 Hs.577987 NR_046378 MTUS2-AS1 - MTUS2 antisense RNA 1 ncRNA chr2-1913 chr2 211590188 211590432 + 16.2 0.000 intron (NM_001042599, intron 19 of 26) LTR8|LTR|ERV1 836050 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-2176 chr1 2259666 2259910 + 16.2 0.000 intron (NM_003036, intron 1 of 6) L1MC4|LINE|L1 31469 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr2-970 chr2 101973014 101973258 + 16.2 0.000 Intergenic Intergenic -10329 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA chr3-1393 chr3 124016585 124016829 + 16.2 0.000 Intergenic Intergenic -24537 NR_133917 54763 Hs.567516 NM_017578 ENSG00000065371 ROPN1 CT91|ODF6|RHPNAP1|ROPN1A|ropporin rhophilin associated tail protein 1 protein-coding chr3-665 chr3 87227041 87227285 + 16.2 0.000 promoter-TSS (NM_001244644) promoter-TSS (NM_001244644) -146 NM_001244644 25978 Hs.476930 NM_014043 ENSG00000083937 CHMP2B ALS17|CHMP2.5|DMT1|VPS2-2|VPS2B charged multivesicular body protein 2B protein-coding chr12-1229 chr12 113222108 113222352 + 16.2 0.000 intron (NM_017901, intron 1 of 27) intron (NM_017901, intron 1 of 27) 766 NM_001143819 53373 Hs.524763 NM_017901 ENSG00000186815 TPCN1 TPC1 two pore segment channel 1 protein-coding chr10-1224 chr10 91613846 91614090 + 16.2 0.000 Intergenic Intergenic -2508 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr4-1067 chr4 137533963 137534207 + 16.2 0.000 Intergenic Intergenic -1591 NM_001300828 54510 Hs.591691 NM_019035 ENSG00000189184 PCDH18 PCDH68L protocadherin 18 protein-coding chr2-1744 chr2 80302756 80303000 + 16.2 0.000 exon (NM_178839, exon 2 of 2) exon (NM_178839, exon 2 of 2) 1874 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding chr2-1724 chr2 69549501 69549745 + 16.2 0.000 intron (NM_014911, intron 3 of 21) CR1-3_Croc|LINE|CR1 -29452 NR_003705 100124535 Hs.693447 NR_003705 ENSG00000207016 SNORA36C - small nucleolar RNA, H/ACA box 36C snoRNA chr3-884 chr3 152266716 152266960 + 16.2 0.000 non-coding (NR_027037, exon 2 of 2) non-coding (NR_027037, exon 2 of 2) -2091 NM_207292 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding chr1-2332 chr1 33433588 33433832 + 16.0 0.000 Intergenic Intergenic -38935 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr9-926 chr9 99720602 99720846 + 16.0 0.000 intron (NR_109802, intron 2 of 6) MLT1J-int|LTR|ERVL-MaLR 99165 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA chr20-95 chr20 3209090 3209334 + 16.0 0.000 promoter-TSS (NM_181493) promoter-TSS (NM_181493) -286 NM_001324236 3704 Hs.415299 NM_033453 ENSG00000125877 ITPA C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 inosine triphosphatase protein-coding chr5-1012 chr5 37900708 37900952 + 16.0 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -47661 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA chr15-331 chr15 75023415 75023659 + 16.0 0.000 promoter-TSS (NM_001301103) promoter-TSS (NM_001301103) -18 NR_125369 60490 Hs.458922 NM_021823 ENSG00000138621 PPCDC MDS018|PPC-DC|coaC phosphopantothenoylcysteine decarboxylase protein-coding chr19-939 chr19 9323766 9324010 + 16.0 0.000 promoter-TSS (NM_001202412) promoter-TSS (NM_001202412) 116 NM_001202408 84527 Hs.172979 NM_032497 ENSG00000188321 ZNF559 NBLA00121 zinc finger protein 559 protein-coding chr12-675 chr12 94459641 94459885 + 16.0 0.000 promoter-TSS (NR_027035) promoter-TSS (NR_027035) 104 NM_016122 51134 Hs.279209 NM_016122 ENSG00000173588 CEP83 CCDC41|NPHP18|NY-REN-58 centrosomal protein 83 protein-coding chr11-1568 chr11 70111536 70111780 + 16.0 0.000 intron (NM_018043, intron 6 of 25) intron (NM_018043, intron 6 of 25) 26248 NR_030691 55107 Hs.503074 NM_018043 ENSG00000131620 ANO1 DOG1|ORAOV2|TAOS2|TMEM16A anoctamin 1 protein-coding chr19-1537 chr19 16197296 16197540 + 16.0 0.000 promoter-TSS (NM_001130524) promoter-TSS (NM_001130524) -493 NM_001130524 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr4-606 chr4 82516072 82516316 + 16.0 0.000 intron (NM_001353454, intron 1 of 7) intron (NM_001353454, intron 1 of 7) 45794 NM_001080506 441027 Hs.507676 NM_001080506 ENSG00000249242 TMEM150C TTN3 transmembrane protein 150C protein-coding chr5-1132 chr5 139787763 139788007 + 16.0 0.000 Intergenic CpG -7923 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr20-549 chr20 21183347 21183591 + 16.0 0.000 intron (NM_018474, intron 6 of 12) intron (NM_018474, intron 6 of 12) 34820 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA chr9-1064 chr9 27133967 27134211 + 16.0 0.000 intron (NM_001290078, intron 1 of 20) Tigger15a|DNA|TcMar-Tigger 24948 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding chr13-395 chr13 71852071 71852315 + 16.0 0.000 intron (NM_080759, intron 1 of 10) intron (NM_080759, intron 1 of 10) 14999 NM_004392 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding chr12-1236 chr12 117060738 117060982 + 16.0 0.000 intron (NR_031766, intron 2 of 7) intron (NR_031766, intron 2 of 7) 38556 NM_017899 54997 Hs.525709 NM_017899 ENSG00000088992 TESC CHP3|TSC tescalcin protein-coding chr13-505 chr13 97947286 97947530 + 16.0 0.000 Intergenic Intergenic -6267 NM_002271 3843 Hs.712598 NM_002271 ENSG00000065150 IPO5 IMB3|KPNB3|Pse1|RANBP5|imp5 importin 5 protein-coding chr8-388 chr8 37100071 37100315 + 16.0 0.000 Intergenic Intergenic 315819 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr6-786 chr6 33768688 33768932 + 16.0 0.000 Intergenic Intergenic 18132 NM_001143944 221496 Hs.444845 NM_181336 ENSG00000161904 LEMD2 CTRCT42|LEM2|NET25|dJ482C21.1 LEM domain containing 2 protein-coding chr6-630 chr6 149233595 149233839 + 16.0 0.000 intron (NM_001292035, intron 2 of 6) intron (NM_001292035, intron 2 of 6) 15791 NM_001292035 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding chrX-373 chrX 47751760 47752004 + 16.0 0.000 Intergenic LTR28B|LTR|ERV1 44691 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo chr22-516 chr22 42662119 42662363 + 16.0 0.000 Intergenic CpG -12849 NM_000398 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr9-964 chr9 124658192 124658436 + 16.0 0.000 promoter-TSS (NR_038975) promoter-TSS (NR_038975) -122 NR_038975 100379345 Hs.660412 NR_038975 ENSG00000224020 MIR181A2HG - MIR181A2 host gene ncRNA chr6-286 chr6 109382485 109382729 + 16.0 0.000 promoter-TSS (NM_001346500) promoter-TSS (NM_001346500) -140 NM_006016 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr9-621 chr9 133955730 133955974 + 16.0 0.000 intron (NM_001134398, intron 1 of 29) intron (NM_001134398, intron 1 of 29) 36472 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr22-312 chr22 50436651 50436895 + 16.0 0.000 intron (NM_001242899, intron 14 of 22) intron (NM_001242899, intron 14 of 22) 29331 NR_162128 113218480 NR_162128 MIR12114 - microRNA 12114 ncRNA chr4-924 chr4 10997791 10998035 + 16.0 0.000 Intergenic Intergenic -313145 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr18-326 chr18 36441863 36442107 + 16.0 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 144272 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr17-935 chr17 15945117 15945361 + 16.0 0.000 5' UTR (NM_000676, exon 1 of 2) 5' UTR (NM_000676, exon 1 of 2) 322 NM_000676 136 Hs.167046 NM_000676 ENSG00000170425 ADORA2B ADORA2 adenosine A2b receptor protein-coding chr22-598 chr22 49749912 49750156 + 16.0 0.000 Intergenic Intergenic 74297 NM_001349940 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding chr6-1131 chr6 168086092 168086336 + 16.0 0.000 Intergenic Intergenic -4657 NR_110312 79981 Hs.266746 NM_024919 ENSG00000153303 FRMD1 bA164L23.1 FERM domain containing 1 protein-coding chr5-1174 chr5 171777208 171777452 + 16.0 0.000 Intergenic Intergenic -8542 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding chr12-750 chr12 54418969 54419213 + 16.0 0.000 promoter-TSS (NR_120488) promoter-TSS (NR_120488) 175 NM_002205 3678 Hs.505654 NM_002205 ENSG00000161638 ITGA5 CD49e|FNRA|VLA-5|VLA5A integrin subunit alpha 5 protein-coding chr19-1603 chr19 39252754 39252998 + 16.0 0.000 Intergenic Intergenic -4020 NM_001276254 101180976 Hs.745579 NM_001276254 ENSG00000272395 IFNL4 IFNAN interferon lambda 4 (gene/pseudogene) protein-coding chrX-479 chrX 68901368 68901612 + 16.0 0.000 Intergenic MIRc|SINE|MIR 72493 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr2-610 chr2 53970941 53971185 + 16.0 0.000 promoter-TSS (NM_001320586) promoter-TSS (NM_001320586) -50 NM_001320587 98 Hs.516173 NM_138448 ENSG00000170634 ACYP2 ACYM|ACYP acylphosphatase 2 protein-coding chr11-602 chr11 13463232 13463476 + 16.0 0.000 promoter-TSS (NM_001297741) promoter-TSS (NM_001297741) -57 NM_032320 84280 Hs.332382 NM_032320 ENSG00000148925 BTBD10 GMRP-1|GMRP1 BTB domain containing 10 protein-coding chr21-193 chr21 46562387 46562631 + 16.0 0.000 intron (NM_015151, intron 34 of 37) intron (NM_015151, intron 34 of 37) 42573 NM_006272 6285 Hs.422181 NM_006272 ENSG00000160307 S100B NEF|S100|S100-B|S100beta S100 calcium binding protein B protein-coding chr1-2457 chr1 96560169 96560413 + 16.0 0.000 Intergenic LTR26|LTR|ERV1 -161314 NM_021190 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding chr17-755 chr17 28973473 28973717 + 16.0 0.000 intron (NM_001290202, intron 3 of 16) intron (NM_001290202, intron 3 of 16) -22077 NM_020889 57649 Hs.444173 NM_020889 ENSG00000109118 PHF12 PF1 PHD finger protein 12 protein-coding KI270736.1-9 KI270736.1 167298 167542 + 16.0 0.000 NA NA NA NA chr13-440 chr13 32206470 32206714 + 16.0 0.000 intron (NM_023037, intron 31 of 60) L2c|LINE|L2 105362 NM_001136571 646799 Hs.569254 NM_001136571 ENSG00000189167 ZAR1L Z3CXXC7|ZAR2 zygote arrest 1 like protein-coding chr5-855 chr5 180802496 180802740 + 16.0 0.000 intron (NR_157150, intron 1 of 1) CpG 188 NM_001364392 4245 Hs.519818 NM_002406 ENSG00000131446 MGAT1 GLCNAC-TI|GLCT1|GLYT1|GNT-1|GNT-I|GnTI|MGAT mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase protein-coding chr1-2475 chr1 110608802 110609046 + 16.0 0.000 intron (NM_001204269, intron 1 of 4) intron (NM_001204269, intron 1 of 4) -2566 NM_004974 3737 Hs.248139 NM_004974 ENSG00000177301 KCNA2 EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2 potassium voltage-gated channel subfamily A member 2 protein-coding chr16-958 chr16 70161907 70162151 + 16.0 0.000 3' UTR (NM_017990, exon 19 of 19) 3' UTR (NM_017990, exon 19 of 19) 11419 NR_126007 400541 Hs.461183 NR_126007 ENSG00000247228 LOC400541 - uncharacterized LOC400541 ncRNA chr16-1186 chr16 81553084 81553328 + 16.0 0.000 intron (NM_030629, intron 1 of 20) intron (NM_030629, intron 1 of 20) 19304 NR_107008 102465840 NR_107008 ENSG00000277255 MIR7854 hsa-mir-7854 microRNA 7854 ncRNA chr8-854 chr8 41201519 41201763 + 16.0 0.000 Intergenic Intergenic 69502 NR_049801 100847068 NR_049801 ENSG00000263372 MIR548AO - microRNA 548ao ncRNA chr6-625 chr6 136077941 136078185 + 16.0 0.000 intron (NM_018945, intron 2 of 12) intron (NM_018945, intron 2 of 12) -5236 NR_149042 644135 Hs.126980 NR_149042 ENSG00000237596 LOC644135 - uncharacterized LOC644135 ncRNA chrX-385 chrX 100379255 100379499 + 16.0 0.000 intron (NM_020766, intron 2 of 4) intron (NM_020766, intron 2 of 4) 30896 NM_020766 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding chr8-235 chr8 86854209 86854453 + 16.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -12084 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding chr5-872 chr5 33736658 33736902 + 16.0 0.000 intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 155210 NM_030955 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding chr20-533 chr20 7695933 7696177 + 16.0 0.000 Intergenic Intergenic 244403 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr11-1065 chr11 10259085 10259329 + 16.0 0.000 intron (NM_030962, intron 1 of 39) MIR|SINE|MIR 35000 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr1-1446 chr1 224183170 224183414 + 16.0 0.000 promoter-TSS (NM_001321541) promoter-TSS (NM_001321541) 52 NM_003676 8560 Hs.299878 NM_003676 ENSG00000143753 DEGS1 DEGS|DEGS-1|DES1|Des-1|FADS7|HLD18|MIG15|MLD delta 4-desaturase, sphingolipid 1 protein-coding chr12-51 chr12 121750672 121750916 + 16.0 0.000 intron (NM_001080825, intron 4 of 11) (CCCACAC)n|Simple_repeat|Simple_repeat 38042 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr3-533 chr3 99817944 99818188 + 16.0 0.000 non-coding (NR_110821, exon 3 of 3) non-coding (NR_110821, exon 3 of 3) 204 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr12-1082 chr12 43309907 43310151 + 16.0 0.000 Intergenic MamGypsy2-I|LTR|Gypsy 154714 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA chr19-1053 chr19 3618355 3618599 + 16.0 0.000 intron (NM_001080543, intron 6 of 9) intron (NM_001080543, intron 6 of 9) 8313 NM_001080543 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr14-493 chr14 99015698 99015942 + 16.0 0.000 Intergenic Intergenic 256377 NM_138576 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding chr14-766 chr14 89040508 89040752 + 16.0 0.000 Intergenic Intergenic 215979 NM_001366535 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding chr3-875 chr3 133894052 133894296 + 16.0 0.000 intron (NM_001363953, intron 1 of 8) intron (NM_001363953, intron 1 of 8) 1673 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr9-737 chr9 135768981 135769225 + 16.0 0.000 intron (NM_001272003, intron 14 of 30) CpG-29053 66918 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr2-1612 chr2 11320087 11320331 + 16.0 0.000 intron (NM_001321643, intron 1 of 32) intron (NM_001321643, intron 1 of 32) 24427 NM_004850 9475 Hs.681743 NM_004850 ENSG00000134318 ROCK2 ROCK-II Rho associated coiled-coil containing protein kinase 2 protein-coding chr17-517 chr17 75814837 75815081 + 16.0 0.000 intron (NM_001080419, intron 6 of 15) intron (NM_001080419, intron 6 of 15) 29758 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr9-689 chr9 124046713 124046957 + 16.0 0.000 Intergenic AluJb|SINE|Alu 35067 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr3-908 chr3 196439918 196440162 + 16.0 0.000 Intergenic Intergenic -7613 NM_015562 26043 Hs.518524 NM_015562 ENSG00000163960 UBXN7 UBXD7 UBX domain protein 7 protein-coding chr21-266 chr21 45933227 45933471 + 16.0 0.000 intron (NM_001348241, intron 14 of 16) intron (NM_001348241, intron 14 of 16) -39621 NR_109931 101928796 Hs.130919 NR_109931 LOC101928796 - uncharacterized LOC101928796 ncRNA chr10-1128 chr10 30759637 30759881 + 16.0 0.000 Intergenic Intergenic 36540 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA chr8-723 chr8 13239454 13239698 + 16.0 0.000 intron (NM_001348082, intron 5 of 16) MamSINE1|SINE|tRNA-RTE 36945 NM_001316668 10395 Hs.134296 NM_006094 ENSG00000164741 DLC1 ARHGAP7|HP|STARD12|p122-RhoGAP DLC1 Rho GTPase activating protein protein-coding chr4-333 chr4 99946404 99946648 + 16.0 0.000 promoter-TSS (NM_001278311) promoter-TSS (NM_001278311) 92 NM_001031723 79982 Hs.577426 NM_024920 ENSG00000164031 DNAJB14 EGNR9427|PRO34683 DnaJ heat shock protein family (Hsp40) member B14 protein-coding chr14-622 chr14 51581172 51581416 + 16.0 0.000 intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) 18658 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA chr11-1402 chr11 3162218 3162462 + 16.0 0.000 intron (NM_145638, intron 1 of 20) L2|LINE|L2 2970 NM_001144063 114879 Hs.436166 NM_020896 ENSG00000021762 OSBPL5 OBPH1|ORP5 oxysterol binding protein like 5 protein-coding chr14-505 chr14 22599003 22599247 + 16.0 0.000 intron (NM_022060, intron 1 of 6) intron (NM_022060, intron 1 of 6) 887 NM_022060 63874 Hs.445665 NM_022060 ENSG00000100439 ABHD4 ABH4 abhydrolase domain containing 4 protein-coding chr6-519 chr6 52670994 52671238 + 16.0 0.000 promoter-TSS (NM_014051) promoter-TSS (NM_014051) 3 NM_014051 28978 Hs.94896 NM_014051 ENSG00000096092 TMEM14A C6orf73|PTD011 transmembrane protein 14A protein-coding chrX-52 chrX 13786925 13787169 + 16.0 0.000 intron (NM_001318729, intron 1 of 6) (A)n|Simple_repeat|Simple_repeat 30046 NM_001001995 2824 Hs.495710 NM_005278 ENSG00000046653 GPM6B M6B glycoprotein M6B protein-coding chr3-951 chr3 46878880 46879124 + 16.0 0.000 intron (NM_000316, intron 1 of 15) intron (NM_000316, intron 1 of 15) 1281 NM_000316 5745 Hs.1019 NM_000316 ENSG00000160801 PTH1R EKNS|PFE|PTHR|PTHR1 parathyroid hormone 1 receptor protein-coding chr1-1734 chr1 37534593 37534837 + 16.0 0.000 3' UTR (NM_024700, exon 4 of 4) 3' UTR (NM_024700, exon 4 of 4) 19578 NM_024700 79753 Hs.47232 NM_024700 ENSG00000163877 SNIP1 PML1|PMRED Smad nuclear interacting protein 1 protein-coding chr4-928 chr4 16952909 16953153 + 16.0 0.000 Intergenic Intergenic -54222 NM_001304435 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr3-1443 chr3 151478411 151478655 + 16.0 0.000 Intergenic Intergenic -19824 NM_178822 285313 Hs.58561 NM_178822 ENSG00000152580 IGSF10 CMF608 immunoglobulin superfamily member 10 protein-coding chr19-1357 chr19 19040553 19040797 + 16.0 0.000 intron (NM_001199196, intron 2 of 8) AluSx|SINE|Alu -6831 NR_147915 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr14-558 chr14 74018443 74018687 + 16.0 0.000 promoter-TSS (NM_025057) promoter-TSS (NM_025057) 723 NM_001321986 957 Hs.655070 NM_001249 ENSG00000187097 ENTPD5 CD39L4|NTPDase-5|PCPH ectonucleoside triphosphate diphosphohydrolase 5 (inactive) protein-coding chr9-1219 chr9 75027346 75027590 + 16.0 0.000 promoter-TSS (NM_001320497) promoter-TSS (NM_001320497) -317 NM_001320497 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding chr2-1478 chr2 62596597 62596841 + 16.0 0.000 Intergenic Intergenic -77159 NM_001142615 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding chr2-1156 chr2 218658719 218658963 + 16.0 0.000 promoter-TSS (NM_001318836) promoter-TSS (NM_001318836) 782 NM_001367339 7701 Hs.657969 NM_001105537 ENSG00000115568 ZNF142 HA4654|NEDISHM|pHZ-49 zinc finger protein 142 protein-coding chr21-234 chr21 36097852 36098096 + 16.0 0.000 intron (NR_040084, intron 2 of 3) MER4B-int|LTR|ERV1 -6907 NR_147887 105369306 NR_147887 ENSG00000233393 LOC105369306 - uncharacterized LOC105369306 ncRNA chr1-2460 chr1 99784281 99784525 + 16.0 0.000 Intergenic Intergenic -17768 NM_001361041 391059 Hs.454779 NM_001013660 ENSG00000156869 FRRS1 SDFR2|SDR2 ferric chelate reductase 1 protein-coding chr2-640 chr2 196593356 196593600 + 16.0 0.000 promoter-TSS (NM_001348768) promoter-TSS (NM_001348768) 76 NM_001348768 57520 Hs.633212 NM_020760 ENSG00000138411 HECW2 NDHSAL|NEDL2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 protein-coding chr19-634 chr19 40646096 40646340 + 16.0 0.000 Intergenic Intergenic 43946 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr15-295 chr15 70763537 70763781 + 16.0 0.000 promoter-TSS (NM_018003) promoter-TSS (NM_018003) -101 NM_018003 55075 Hs.108049 NM_018003 ENSG00000137831 UACA NUCLING uveal autoantigen with coiled-coil domains and ankyrin repeats protein-coding chr6-1085 chr6 147764160 147764404 + 16.0 0.000 Intergenic Intergenic 255592 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr7-754 chr7 90825740 90825984 + 16.0 0.000 intron (NM_012395, intron 4 of 13) intron (NM_012395, intron 4 of 13) 116046 NM_001287136 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr5-1005 chr5 32522824 32523068 + 16.0 0.000 Intergenic Intergenic -62611 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding chr11-1125 chr11 64436221 64436465 + 16.0 0.000 Intergenic Intergenic -12714 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr7-774 chr7 100972310 100972554 + 16.0 0.000 intron (NM_001164462, intron 1 of 11) intron (NM_001164462, intron 1 of 11) 2809 NM_001164462 10071 Hs.489355 NM_001164462 ENSG00000205277 MUC12 MUC-11|MUC-12|MUC11 mucin 12, cell surface associated protein-coding chr2-1100 chr2 75596106 75596350 + 16.0 0.000 Intergenic MER21C|LTR|ERVL -26509 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding chr15-670 chr15 65400835 65401079 + 16.0 0.000 intron (NM_020962, intron 4 of 19) intron (NM_020962, intron 4 of 19) 21990 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr19-1204 chr19 15114261 15114505 + 16.0 0.000 TTS (NM_006844) TTS (NM_006844) 6982 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding chr7-1018 chr7 128266909 128267153 + 16.0 0.000 Intergenic Intergenic 25753 NM_000230 3952 Hs.194236 NM_000230 ENSG00000174697 LEP LEPD|OB|OBS leptin protein-coding chr9-808 chr9 128152968 128153212 + 16.0 0.000 intron (NM_005564, intron 5 of 6) intron (NM_005564, intron 5 of 6) 3637 NM_005564 3934 Hs.204238 NM_005564 ENSG00000148346 LCN2 24p3|MSFI|NGAL|p25 lipocalin 2 protein-coding chr21-124 chr21 46079484 46079728 + 16.0 0.000 Intergenic Intergenic -18506 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr7-618 chr7 11831646 11831890 + 16.0 0.000 exon (NM_015204, exon 1 of 27) exon (NM_015204, exon 1 of 27) 430 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr7-1457 chr7 158952755 158952999 + 16.0 0.000 Intergenic Intergenic -55477 NR_024394 154822 Hs.544783 NM_198345 ENSG00000231419 LINC00689 - long intergenic non-protein coding RNA 689 ncRNA chr1-1700 chr1 26850267 26850511 + 16.0 0.000 exon (NM_032283, exon 4 of 8) exon (NM_032283, exon 4 of 8) -12760 NM_006142 2810 Hs.523718 NM_006142 ENSG00000175793 SFN YWHAS stratifin protein-coding chr17-1287 chr17 33169884 33170128 + 16.0 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 122982 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr11-1683 chr11 132821064 132821308 + 16.0 0.000 intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 122451 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr20-472 chr20 10514904 10515148 + 16.0 0.000 intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 79721 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding chr17-1456 chr17 81474917 81475161 + 16.0 0.000 Intergenic Intergenic -23851 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr2-422 chr2 219642535 219642779 + 16.0 0.000 TTS (NM_201574) TTS (NM_201574) 15027 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr2-1282 chr2 96131827 96132071 + 16.0 0.000 intron (NM_001002036, intron 6 of 8) intron (NM_001002036, intron 6 of 8) 6487 NM_001002036 431705 Hs.447993 NM_001002036 ENSG00000188886 ASTL SAS1B astacin like metalloendopeptidase protein-coding chr12-925 chr12 132625786 132626030 + 16.0 0.000 intron (NM_006231, intron 46 of 48) intron (NM_006231, intron 46 of 48) 7132 NM_012226 22953 Hs.258580 NM_012226 ENSG00000187848 P2RX2 DFNA41|P2X2 purinergic receptor P2X 2 protein-coding chr11-1518 chr11 64067194 64067438 + 16.0 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -36574 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr16-701 chr16 2297289 2297533 + 16.0 0.000 exon (NM_001089, exon 17 of 33) exon (NM_001089, exon 17 of 33) 22791 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr9-1189 chr9 28987065 28987309 + 16.0 0.000 intron (NM_001354574, intron 1 of 5) L1MA7|LINE|L1 -98232 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA chr18-200 chr18 28176243 28176487 + 16.0 0.000 intron (NM_001792, intron 1 of 15) CpG 765 NM_001792 1000 Hs.464829 NM_001792 ENSG00000170558 CDH2 CD325|CDHN|CDw325|NCAD cadherin 2 protein-coding chrX-203 chrX 52935020 52935264 + 16.0 0.000 Intergenic CpG 21613 NM_001099684 727866 Hs.6451 NM_001099684 ENSG00000179304 FAM156B TMEM29B family with sequence similarity 156 member B protein-coding chr1-2122 chr1 221149185 221149429 + 16.0 0.000 Intergenic Intergenic 186989 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA chr12-988 chr12 99569950 99570194 + 16.0 0.000 intron (NM_152788, intron 9 of 25) intron (NM_152788, intron 9 of 25) -77681 NM_153364 196472 Hs.591011 NM_153364 ENSG00000180219 FAM71C - family with sequence similarity 71 member C protein-coding chr14-528 chr14 51396385 51396629 + 16.0 0.000 intron (NR_146549, intron 1 of 3) intron (NR_146549, intron 1 of 3) 628 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA chr1-2114 chr1 208885048 208885292 + 16.0 0.000 Intergenic Intergenic -87284 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA chr19-1288 chr19 50249797 50250041 + 16.0 0.000 intron (NM_024729, intron 13 of 40) MIR|SINE|MIR 46291 NM_001077186 79784 Hs.467142 NM_024729 ENSG00000105357 MYH14 DFNA4|DFNA4A|FP17425|MHC16|MYH17|NMHC II-C|NMHC-II-C|PNMHH|myosin myosin heavy chain 14 protein-coding chr1-2343 chr1 38114351 38114595 + 16.0 0.000 Intergenic Intergenic 25242 NR_037432 100500801 NR_037432 ENSG00000265596 MIR3659 mir-3659 microRNA 3659 ncRNA chr1-2417 chr1 79811308 79811552 + 16.0 0.000 Intergenic Intergenic -724325 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr12-1199 chr12 104720429 104720673 + 16.0 0.000 intron (NM_018413, intron 2 of 2) intron (NM_018413, intron 2 of 2) 128918 NR_037487 100500843 NR_037487 ENSG00000264295 MIR3922 - microRNA 3922 ncRNA chr11-998 chr11 64675840 64676084 + 16.0 0.000 intron (NM_138732, intron 6 of 19) (ACCCAC)n|Simple_repeat|Simple_repeat -32417 NM_138734 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chr3-225 chr3 40524746 40524990 + 16.0 0.000 promoter-TSS (NM_198484) promoter-TSS (NM_198484) -10 NM_001287245 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding chr10-728 chr10 32056056 32056300 + 16.0 0.000 5' UTR (NM_004521, exon 1 of 26) 5' UTR (NM_004521, exon 1 of 26) 247 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding chr11-1331 chr11 72430866 72431110 + 16.0 0.000 intron (NM_030813, intron 1 of 16) MIRc|SINE|MIR 3543 NM_030813 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr5-368 chr5 39074828 39075072 + 16.0 0.000 promoter-TSS (NM_152756) promoter-TSS (NM_152756) -551 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding chr7-683 chr7 1842597 1842841 + 16.0 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) 1534 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr12-969 chr12 56097647 56097891 + 16.0 0.000 intron (NM_001982, intron 20 of 27) intron (NM_001982, intron 20 of 27) -6790 NM_006191 5036 Hs.524498 NM_006191 ENSG00000170515 PA2G4 EBP1|HG4-1|p38-2G4 proliferation-associated 2G4 protein-coding chr4-1110 chr4 180288168 180288412 + 16.0 0.000 Intergenic AluSc|SINE|Alu 870859 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr22-417 chr22 46511659 46511903 + 16.0 0.000 intron (NM_014246, intron 1 of 34) GA-rich|Low_complexity|Low_complexity 25839 NM_014246 9620 Hs.252387 NM_014246 ENSG00000075275 CELSR1 ADGRC1|CDHF9|FMI2|HFMI2|ME2 cadherin EGF LAG seven-pass G-type receptor 1 protein-coding chr9-1197 chr9 34579435 34579679 + 16.0 0.000 intron (NM_001842, intron 1 of 8) intron (NM_001842, intron 1 of 8) 10167 NM_147164 1271 Hs.129966 NM_001842 ENSG00000122756 CNTFR - ciliary neurotrophic factor receptor protein-coding chr11-1037 chr11 134293875 134294119 + 16.0 0.000 intron (NM_001080407, intron 9 of 19) intron (NM_001080407, intron 9 of 19) 17618 NM_001080407 112937 Hs.721382 NM_138416 ENSG00000166105 GLB1L3 - galactosidase beta 1 like 3 protein-coding chr11-1660 chr11 124717565 124717809 + 16.0 0.000 Intergenic Intergenic -22255 NM_001126181 4900 Hs.524116 NM_006176 ENSG00000154146 NRGN RC3|hng neurogranin protein-coding chr7-956 chr7 54995960 54996204 + 16.0 0.000 Intergenic L2|LINE|L2 -22935 NM_001346898 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding chr1-2695 chr1 246422015 246422259 + 16.0 0.000 intron (NM_001167740, intron 1 of 11) intron (NM_001167740, intron 1 of 11) -4725 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding chr2-1936 chr2 219471738 219471982 + 16.0 0.000 intron (NM_005876, intron 13 of 40) intron (NM_005876, intron 13 of 40) 11048 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr1-1558 chr1 156160970 156161214 + 16.0 0.000 intron (NM_001370567, intron 7 of 13) intron (NM_001370567, intron 7 of 13) 6544 NM_001370567 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr9-727 chr9 134216351 134216595 + 16.0 0.000 Intergenic Intergenic -51909 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr9-435 chr9 112750452 112750696 + 16.0 0.000 promoter-TSS (NM_001012994) promoter-TSS (NM_001012994) -186 NM_001012994 401548 Hs.522350 NM_001012994 ENSG00000148158 SNX30 ATG24A sorting nexin family member 30 protein-coding chr4-857 chr4 170089737 170089981 + 16.0 0.000 promoter-TSS (NM_016228) promoter-TSS (NM_016228) 97 NM_016228 51166 Hs.529735 NM_016228 ENSG00000109576 AADAT KAT2|KATII|KYAT2 aminoadipate aminotransferase protein-coding chr11-1230 chr11 123368688 123368932 + 16.0 0.000 intron (NM_001367419, intron 1 of 20) intron (NM_001367419, intron 1 of 20) 10274 NM_001367421 57476 Hs.144725 NM_020716 ENSG00000023171 GRAMD1B LINC01059 GRAM domain containing 1B protein-coding chr18-362 chr18 76697436 76697680 + 16.0 0.000 Intergenic Intergenic 7529 NR_122073 400661 Hs.514963 NR_122073 ENSG00000276397 LINC01879 - long intergenic non-protein coding RNA 1879 ncRNA chr14-743 chr14 70921334 70921578 + 16.0 0.000 intron (NM_014982, intron 1 of 35) AluJr4|SINE|Alu 13997 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding chr2-1480 chr2 69177510 69177754 + 16.0 0.000 intron (NM_032208, intron 14 of 17) intron (NM_032208, intron 14 of 17) 73950 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr9-579 chr9 137417139 137417383 + 16.0 0.000 intron (NM_001286823, intron 1 of 7) CpG 5901 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr20-473 chr20 16804108 16804352 + 16.0 0.000 Intergenic Intergenic 55877 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding chr8-619 chr8 29885992 29886236 + 16.0 0.000 Intergenic Intergenic -35399 NR_024473 286135 Hs.376840 NR_024473 ENSG00000253279 LINC02209 FAM183CP long intergenic non-protein coding RNA 2209 ncRNA chr15-597 chr15 82183769 82184013 + 16.0 0.000 intron (NM_001040610, intron 13 of 17) intron (NM_001040610, intron 13 of 17) 78637 NM_001322845 79631 Hs.459114 NM_024580 ENSG00000140598 EFL1 EFTUD1|FAM42A|HsT19294|RIA1|SDS2 elongation factor like GTPase 1 protein-coding chr19-1048 chr19 2455781 2456025 + 16.0 0.000 intron (NM_032737, intron 1 of 11) CpG 1056 NM_032737 84823 Hs.538286 NM_032737 ENSG00000176619 LMNB2 EPM9|LAMB2|LMN2 lamin B2 protein-coding chr9-1094 chr9 105385313 105385557 + 15.9 0.000 exon (NM_001286730, exon 15 of 16) exon (NM_001286730, exon 15 of 16) -62599 NM_031919 83856 Hs.136901 NM_031919 ENSG00000106701 FSD1L CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 fibronectin type III and SPRY domain containing 1 like protein-coding chr9-720 chr9 131180549 131180793 + 15.9 0.000 intron (NM_001318324, intron 24 of 35) intron (NM_001318324, intron 24 of 35) -9468 NM_001318325 8021 Hs.654530 NM_005085 ENSG00000126883 NUP214 CAIN|CAN nucleoporin 214 protein-coding chr3-1284 chr3 49433615 49433859 + 15.9 0.000 Intergenic AluJo|SINE|Alu -4413 NM_032316 84276 Hs.191460 NM_032316 ENSG00000145029 NICN1 - nicolin 1 protein-coding chr4-672 chr4 8561000 8561244 + 15.9 0.000 Intergenic MIR|SINE|MIR -19115 NR_045511 27201 Hs.740355 NM_080819 ENSG00000155269 GPR78 - G protein-coupled receptor 78 protein-coding chr17-941 chr17 19063666 19063910 + 15.9 0.000 TTS (NR_003271).2 TTS (NR_003271).2 348 NR_003271 26851 NR_003271 ENSG00000265185 SNORD3B-1 RNU3A1|U3a|U3b1|U3b2 small nucleolar RNA, C/D box 3B-1 snoRNA chr12-1125 chr12 54549268 54549512 + 15.9 0.000 promoter-TSS (NM_001288768) promoter-TSS (NM_001288768) -3 NM_001288768 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding chr17-696 chr17 47905281 47905525 + 15.9 0.000 intron (NR_103856, intron 2 of 2) intron (NR_103856, intron 2 of 2) 9167 NM_003110 6668 Hs.514276 NM_003110 ENSG00000167182 SP2 - Sp2 transcription factor protein-coding chrX-282 chrX 20044214 20044458 + 15.9 0.000 intron (NM_152780, intron 6 of 15) intron (NM_152780, intron 6 of 15) -27149 NR_037414 100500809 NR_037414 ENSG00000264566 MIR23C hsa-mir-23c|mir-23c microRNA 23c ncRNA chr16-474 chr16 4609550 4609794 + 15.9 0.000 exon (NM_145253, exon 3 of 3) exon (NM_145253, exon 3 of 3) 5216 NM_145253 124402 Hs.513313 NM_145253 ENSG00000153443 UBALD1 FAM100A|PP11303 UBA like domain containing 1 protein-coding chr13-313 chr13 27960745 27960989 + 15.9 0.000 TTS (NM_001354700) TTS (NM_001354700) 7341 NR_135254 100132234 Hs.197435 NR_135254 ENSG00000260704 LINC00543 - long intergenic non-protein coding RNA 543 ncRNA chr15-685 chr15 71136473 71136717 + 15.9 0.000 Intergenic Intergenic -4854 NM_024817 79875 Hs.387057 NM_024817 ENSG00000187720 THSD4 ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005 thrombospondin type 1 domain containing 4 protein-coding chr6-429 chr6 150865450 150865694 + 15.9 0.000 promoter-TSS (NM_001242769) promoter-TSS (NM_001242769) -107 NM_001242767 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr14-749 chr14 74648011 74648255 + 15.9 0.000 Intergenic Intergenic -35896 NM_000428 4053 Hs.512776 NM_000428 ENSG00000119681 LTBP2 C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3 latent transforming growth factor beta binding protein 2 protein-coding chr16-481 chr16 30417938 30418182 + 15.9 0.000 exon (NM_016643, exon 3 of 3) exon (NM_016643, exon 3 of 3) 1699 NR_145731 109616959 NR_145731 ENSG00000199787 SNORA80C - small nucleolar RNA, H/ACA box 80C snoRNA chr1-2162 chr1 1287319 1287563 + 15.9 0.000 intron (NM_001130413, intron 9 of 17) CpG-77 7005 NM_001130413 6339 Hs.512681 NM_002978 ENSG00000162572 SCNN1D ENaCd|ENaCdelta|SCNED|dNaCh sodium channel epithelial 1 delta subunit protein-coding chr19-1095 chr19 35890074 35890318 + 15.9 0.000 intron (NM_032721, intron 10 of 11) intron (NM_032721, intron 10 of 11) 9541 NM_001321831 84807 Hs.466531 NM_032721 ENSG00000167604 NFKBID IkBNS|IkappaBNS|TA-NFKBH NFKB inhibitor delta protein-coding chr2-1898 chr2 197311433 197311677 + 15.9 0.000 promoter-TSS (NM_001195144) promoter-TSS (NM_001195144) -775 NM_001367496 91526 Hs.432706 NM_153697 ENSG00000065413 ANKRD44 PP6-ARS-B ankyrin repeat domain 44 protein-coding chr19-747 chr19 29773356 29773600 + 15.9 0.000 Intergenic Intergenic -38513 NM_001322259 898 Hs.244723 NM_001238 ENSG00000105173 CCNE1 CCNE|pCCNE1 cyclin E1 protein-coding chr14-721 chr14 61662591 61662835 + 15.9 0.000 Intergenic Intergenic -32800 NM_181054 3091 Hs.597216 NM_001530 ENSG00000100644 HIF1A HIF-1-alpha|HIF-1A|HIF-1alpha|HIF1|HIF1-ALPHA|MOP1|PASD8|bHLHe78 hypoxia inducible factor 1 subunit alpha protein-coding chr2-805 chr2 230891334 230891578 + 15.9 0.000 intron (NR_038238, intron 1 of 3) intron (NR_038238, intron 1 of 3) 4910 NR_038238 151484 Hs.559309 NR_038238 ENSG00000232520 LOC151484 - uncharacterized LOC151484 ncRNA chr6-778 chr6 16243163 16243407 + 15.9 0.000 intron (NM_006877, intron 1 of 8) MER5B|DNA|hAT-Charlie 4698 NM_006877 2766 Hs.484741 NM_006877 ENSG00000137198 GMPR GMPR 1|GMPR1 guanosine monophosphate reductase protein-coding chr16-449 chr16 85799059 85799303 + 15.9 0.000 promoter-TSS (NM_001318786) promoter-TSS (NM_001318786) 363 NM_006067 10328 Hs.173162 NM_006067 ENSG00000131148 EMC8 C16orf2|C16orf4|COX4NB|FAM158B|NOC4 ER membrane protein complex subunit 8 protein-coding chr2-912 chr2 29064085 29064329 + 15.9 0.000 3' UTR (NM_001029883, exon 2 of 2) 3' UTR (NM_001029883, exon 2 of 2) 10316 NM_001029883 388939 Hs.354243 NM_001029883 ENSG00000179270 PCARE C2orf71|RP54 photoreceptor cilium actin regulator protein-coding chr16-722 chr16 31713209 31713453 + 15.9 0.000 5' UTR (NM_001130913, exon 1 of 5) 5' UTR (NM_001130913, exon 1 of 5) 102 NM_001130913 124411 Hs.528826 NM_001004300 ENSG00000197302 ZNF720 - zinc finger protein 720 protein-coding chr1-2385 chr1 53099400 53099644 + 15.9 0.000 intron (NR_109858, intron 5 of 10) intron (NR_109858, intron 5 of 10) 37309 NM_001199080 127435 Hs.586141 NM_153703 ENSG00000174348 PODN PCAN|SLRR5A podocan protein-coding chr3-1424 chr3 138862664 138862908 + 15.9 0.000 Intergenic Intergenic -27858 NM_006219 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chr17-561 chr17 74568996 74569240 + 15.9 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -1775 NM_001324076 100130520 NM_001324073 ENSG00000284690 CD300H CD300Hs CD300H molecule (gene/pseudogene) protein-coding chr14-488 chr14 74922984 74923228 + 15.9 0.000 promoter-TSS (NM_031464) promoter-TSS (NM_031464) 154 NM_001370257 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr20-186 chr20 63894490 63894734 + 15.9 0.000 promoter-TSS (NM_025219) promoter-TSS (NM_025219) -514 NM_025219 80331 Hs.164419 NM_025219 ENSG00000101152 DNAJC5 CLN4|CLN4B|CSP|DNAJC5A|NCL|mir-941-2|mir-941-3|mir-941-4|mir-941-5 DnaJ heat shock protein family (Hsp40) member C5 protein-coding chrX-367 chrX 38666409 38666653 + 15.9 0.000 intron (NM_004615, intron 2 of 7) intron (NM_004615, intron 2 of 7) 105053 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr9-767 chr9 19049066 19049310 + 15.9 0.000 promoter-TSS (NM_006570) promoter-TSS (NM_006570) 166 NM_001287049 158297 Hs.731593 NM_153707 ENSG00000155875 SAXO1 C9orf138|FAM154A stabilizer of axonemal microtubules 1 protein-coding chr19-919 chr19 3614249 3614493 + 15.9 0.000 TTS (NR_038865) TTS (NR_038865) 7124 NR_038865 404665 Hs.719726 NM_001012712 ENSG00000226800 CACTIN-AS1 C19orf29-AS1|C19orf29OS CACTIN antisense RNA 1 ncRNA chr15-210 chr15 90665553 90665797 + 15.9 0.000 TTS (NR_120371) TTS (NR_120371) 5441 NR_120371 101929765 Hs.615348 NR_120371 ENSG00000245479 LINC01585 - long intergenic non-protein coding RNA 1585 ncRNA chr1-917 chr1 24230958 24231202 + 15.9 0.000 Intergenic AluY|SINE|Alu 30840 NR_027087 284632 Hs.638906 NR_027087 ENSG00000230023 LINC02800 - long intergenic non-protein coding RNA 2800 ncRNA chr5-1120 chr5 135399010 135399254 + 15.9 0.000 5' UTR (NM_001040158, exon 1 of 9) 5' UTR (NM_001040158, exon 1 of 9) 106 NM_001040158 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr1-2304 chr1 26700761 26701005 + 15.9 0.000 intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 4868 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr17-1026 chr17 67021206 67021450 + 15.9 0.000 intron (NM_014405, intron 2 of 3) intron (NM_014405, intron 2 of 3) -23226 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr1-1301 chr1 27341874 27342118 + 15.9 0.000 promoter-TSS (NM_001193308) promoter-TSS (NM_001193308) -26 NM_001193308 84958 Hs.469175 NM_032872 ENSG00000142765 SYTL1 JFC1|SLP1 synaptotagmin like 1 protein-coding chr2-1908 chr2 202849479 202849723 + 15.9 0.000 intron (NM_001288622, intron 1 of 12) L1PA8|LINE|L1 -20367 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr14-576 chr14 91149394 91149638 + 15.9 0.000 intron (NM_001286470, intron 4 of 16) intron (NM_001286470, intron 4 of 16) 23090 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA chr7-1270 chr7 43488843 43489087 + 15.9 0.000 intron (NM_001287059, intron 15 of 27) intron (NM_001287059, intron 15 of 27) 33577 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr10-684 chr10 113855256 113855500 + 15.9 0.000 promoter-TSS (NM_001271816) promoter-TSS (NM_001271816) 717 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding chrX-416 chrX 9822557 9822801 + 15.9 0.000 intron (NM_001649, intron 1 of 9) intron (NM_001649, intron 1 of 9) 36250 NM_001649 357 Hs.567236 NM_001649 ENSG00000146950 SHROOM2 APXL|HSAPXL shroom family member 2 protein-coding chr21-106 chr21 43813576 43813820 + 15.9 0.000 Intergenic Intergenic -1131 NR_026961 284837 Hs.592159 NM_194310 ENSG00000215458 AATBC - apoptosis associated transcript in bladder cancer ncRNA chr13-529 chr13 110831995 110832239 + 15.9 0.000 Intergenic Intergenic 18412 NR_158538 105370362 NR_158538 LOC105370362 - uncharacterized LOC105370362 ncRNA chr19-616 chr19 1468955 1469199 + 15.9 0.000 exon (NM_001351273, exon 14 of 14) exon (NM_001351273, exon 14 of 14) 10138 NM_152482 148223 Hs.532840 NM_152482 ENSG00000119559 C19orf25 - chromosome 19 open reading frame 25 protein-coding chr12-1079 chr12 34387411 34387655 + 15.9 0.000 Intergenic GSATII|Satellite|centr 365037 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding chr6-982 chr6 43770741 43770985 + 15.9 0.000 exon (NM_001171622, exon 1 of 5) exon (NM_001171622, exon 1 of 5) 652 NM_001025366 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr10-1183 chr10 71566752 71566996 + 15.9 0.000 exon (NM_001171931, exon 7 of 25) exon (NM_001171931, exon 7 of 25) -54954 NR_120672 102723377 Hs.568789 NR_120672 ENSG00000223817 CDH23-AS1 C10orf106|NCRNA00223|bA327E2.3 CDH23 antisense RNA 1 ncRNA chr1-1910 chr1 205298543 205298787 + 15.9 0.000 Intergenic Intergenic 23080 NM_030952 81788 Hs.497512 NM_030952 ENSG00000163545 NUAK2 SNARK NUAK family kinase 2 protein-coding chr19-1302 chr19 58183280 58183524 + 15.9 0.000 5' UTR (NM_001278734, exon 1 of 8) 5' UTR (NM_001278734, exon 1 of 8) 341 NM_133502 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding chr15-460 chr15 40471828 40472072 + 15.9 0.000 exon (NM_130468, exon 1 of 1) exon (NM_130468, exon 1 of 1) 989 NM_130468 113189 Hs.442449 NM_130468 ENSG00000169105 CHST14 ATCS|D4ST1|EDSMC1|HNK1ST carbohydrate sulfotransferase 14 protein-coding chr11-813 chr11 73866223 73866467 + 15.9 0.000 Intergenic MER58B|DNA|hAT-Charlie -10354 NM_001267806 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr6-368 chr6 1609766 1610010 + 15.9 0.000 promoter-TSS (NM_001453) promoter-TSS (NM_001453) -27 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr1-1299 chr1 25768754 25768998 + 15.9 0.000 intron (NM_020379, intron 7 of 11) (CA)n|Simple_repeat|Simple_repeat -31317 NM_020451 57190 Hs.323396 NM_020451 ENSG00000162430 SELENON CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1 selenoprotein N protein-coding chr17-821 chr17 81393843 81394087 + 15.9 0.000 Intergenic CpG -5409 NM_001291324 57597 Hs.514580 NM_024696 ENSG00000266074 BAHCC1 BAHD2 BAH domain and coiled-coil containing 1 protein-coding chr9-773 chr9 33212067 33212311 + 15.9 0.000 Intergenic Intergenic -27978 NM_014471 27290 Hs.555934 NM_014471 ENSG00000122711 SPINK4 HEL136|PEC-60|PEC60 serine peptidase inhibitor, Kazal type 4 protein-coding chr16-831 chr16 58499508 58499752 + 15.9 0.000 promoter-TSS (NM_001242836) promoter-TSS (NM_001242836) -513 NM_001242836 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr5-492 chr5 140043172 140043416 + 15.9 0.000 promoter-TSS (NM_013981) promoter-TSS (NM_013981) 5 NM_013982 9542 Hs.408515 NM_004883 ENSG00000158458 NRG2 DON1|HRG2|NTAK neuregulin 2 protein-coding chr11-883 chr11 46295491 46295735 + 15.9 0.000 intron (NM_052854, intron 1 of 11) CpG 17951 NM_052854 90993 Hs.405961 NM_052854 ENSG00000157613 CREB3L1 OASIS|OI16 cAMP responsive element binding protein 3 like 1 protein-coding chr22-684 chr22 38020842 38021086 + 15.9 0.000 intron (NM_001301130, intron 5 of 5) intron (NM_001301130, intron 5 of 5) 32170 NR_039759 100616146 NR_039759 ENSG00000284266 MIR4534 - microRNA 4534 ncRNA chr3-453 chr3 129120717 129120961 + 15.9 0.000 intron (NM_001204890, intron 11 of 12) intron (NM_001204890, intron 11 of 12) 965 NM_198490 339122 Hs.381132 NM_198490 ENSG00000172780 RAB43 RAB11B|RAB41 RAB43, member RAS oncogene family protein-coding chr2-1942 chr2 220034460 220034704 + 15.9 0.000 Intergenic Intergenic -128017 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA chr15-212 chr15 101652104 101652348 + 15.9 0.000 intron (NM_001308026, intron 1 of 5) CpG 155 NM_078474 80213 Hs.288912 NM_025141 ENSG00000184277 TM2D3 BLP2 TM2 domain containing 3 protein-coding chr11-1676 chr11 128988388 128988632 + 15.9 0.000 intron (NM_001142685, intron 11 of 21) intron (NM_001142685, intron 11 of 21) 35678 NM_014715 9743 Hs.440379 NM_014715 ENSG00000134909 ARHGAP32 GC-GAP|GRIT|PX-RICS|RICS|p200RhoGAP|p250GAP Rho GTPase activating protein 32 protein-coding chr8-234 chr8 75102517 75102761 + 15.9 0.000 Intergenic AluY|SINE|Alu 102484 NM_001286778 83690 Hs.436542 NM_031461 ENSG00000121005 CRISPLD1 CRISP-10|CRISP10|LCRISP1 cysteine rich secretory protein LCCL domain containing 1 protein-coding chr5-269 chr5 128083418 128083662 + 15.9 0.000 promoter-TSS (NR_046207) promoter-TSS (NR_046207) -226 NM_001256461 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding chr1-2190 chr1 3251455 3251699 + 15.9 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 123602 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr19-1265 chr19 45097075 45097319 + 15.9 0.000 intron (NM_019121, intron 1 of 12) intron (NM_019121, intron 1 of 12) 4018 NM_019121 284352 Hs.285363 NM_019121 ENSG00000104866 PPP1R37 LRRC68 protein phosphatase 1 regulatory subunit 37 protein-coding chr4-88 chr4 15728329 15728573 + 15.9 0.000 intron (NM_004334, intron 8 of 8) AluJb|SINE|Alu 25386 NM_004334 683 Hs.720344 NM_004334 ENSG00000109743 BST1 CD157 bone marrow stromal cell antigen 1 protein-coding chr6-403 chr6 73309817 73310061 + 15.9 0.000 5' UTR (NM_001251874, exon 1 of 5) 5' UTR (NM_001251874, exon 1 of 5) 220 NM_001251874 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr1-1408 chr1 160092380 160092624 + 15.9 0.000 exon (NM_052868, exon 5 of 7) exon (NM_052868, exon 5 of 7) 6117 NM_001320247 93185 Hs.332012 NM_052868 ENSG00000162729 IGSF8 CD316|CD81P3|EWI-2|EWI2|KCT-4|LIR-D1|PGRL immunoglobulin superfamily member 8 protein-coding chr9-897 chr9 77884460 77884704 + 15.9 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) 147229 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr9-1376 chr9 133849645 133849889 + 15.9 0.000 intron (NM_001134398, intron 3 of 29) MLT1C|LTR|ERVL-MaLR -109812 NM_007101 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr20-590 chr20 36630062 36630306 + 15.9 0.000 intron (NM_175077, intron 5 of 7) intron (NM_175077, intron 5 of 7) 16012 NM_175077 84174 Hs.713578 NM_032214 ENSG00000101082 SLA2 C20orf156|MARS|SLAP-2|SLAP2 Src like adaptor 2 protein-coding chr1-2349 chr1 39269187 39269431 + 15.9 0.000 intron (NM_012090, intron 5 of 92) intron (NM_012090, intron 5 of 92) -139764 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding chr19-1494 chr19 8118991 8119235 + 15.9 0.000 intron (NM_032447, intron 25 of 63) intron (NM_032447, intron 25 of 63) 29756 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr8-248 chr8 133360511 133360755 + 15.9 0.000 Intergenic Intergenic -63329 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr8-188 chr8 26577355 26577599 + 15.9 0.000 promoter-TSS (NM_001386) promoter-TSS (NM_001386) -468 NM_001386 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr15-606 chr15 25231371 25231615 + 15.9 0.000 promoter-TSS (NR_003349) promoter-TSS (NR_003349) 655 NR_003348 100033807 NR_003348 ENSG00000200593 SNORD115-33 HBII-52-33 small nucleolar RNA, C/D box 115-33 snoRNA chr12-1150 chr12 62435408 62435652 + 15.9 0.000 Intergenic L1M2|LINE|L1 -31296 NM_001278470 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr16-836 chr16 65658383 65658627 + 15.9 0.000 Intergenic Intergenic -82205 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA chr19-1279 chr19 48398222 48398466 + 15.9 0.000 intron (NM_000836, intron 1 of 12) CpG 3469 NM_000836 2906 Hs.445015 NM_000836 ENSG00000105464 GRIN2D EB11|EIEE46|GluN2D|NMDAR2D|NR2D glutamate ionotropic receptor NMDA type subunit 2D protein-coding chrX-180 chrX 101617313 101617557 + 15.9 0.000 intron (NM_001184768, intron 2 of 3) intron (NM_001184768, intron 2 of 3) 565 NM_019007 54470 Hs.83530 NM_019007 ENSG00000198960 ARMCX6 GASP10 armadillo repeat containing X-linked 6 protein-coding chr1-1373 chr1 95864090 95864334 + 15.9 0.000 Intergenic Intergenic -127856 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA chr14-331 chr14 74979544 74979788 + 15.9 0.000 Intergenic Intergenic -23255 NM_014239 8892 Hs.409137 NM_014239 ENSG00000119718 EIF2B2 EIF-2Bbeta|EIF2B eukaryotic translation initiation factor 2B subunit beta protein-coding chr20-503 chr20 50116049 50116293 + 15.9 0.000 promoter-TSS (NM_001257393) promoter-TSS (NM_001257393) -214 NM_001257394 7335 Hs.420529 NM_021988 ENSG00000244687 UBE2V1 CIR1|CROC-1|CROC1|UBE2V|UEV-1|UEV1|UEV1A ubiquitin conjugating enzyme E2 V1 protein-coding chr19-1195 chr19 12140008 12140252 + 15.9 0.000 intron (NM_021143, intron 1 of 3) CpG 220 NM_001203250 7568 Hs.512823 NM_021143 ENSG00000132010 ZNF20 KOX13 zinc finger protein 20 protein-coding chr17-1288 chr17 33859522 33859766 + 15.9 0.000 intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 297162 NM_001094 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding chr11-1419 chr11 10406251 10406495 + 15.9 0.000 intron (NR_103765, intron 2 of 3) intron (NR_103765, intron 2 of 3) -43948 NM_001172431 272 Hs.501890 NM_000480 ENSG00000133805 AMPD3 - adenosine monophosphate deaminase 3 protein-coding chr9-1362 chr9 130991920 130992164 + 15.9 0.000 Intergenic L2b|LINE|L2 -17132 NM_006059 10319 Hs.201805 NM_006059 ENSG00000050555 LAMC3 OCCM laminin subunit gamma 3 protein-coding chr17-473 chr17 17681502 17681746 + 15.9 0.000 5' UTR (NM_030665, exon 1 of 6) 5' UTR (NM_030665, exon 1 of 6) 166 NM_030665 10743 Hs.655395 NM_030665 ENSG00000108557 RAI1 SMCR|SMS retinoic acid induced 1 protein-coding chr6-798 chr6 40678447 40678691 + 15.9 0.000 Intergenic Intergenic -91205 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr10-1174 chr10 69641127 69641371 + 15.9 0.000 Intergenic Intergenic 11002 NM_145306 219738 Hs.522992 NM_145306 ENSG00000171224 FAM241B C10orf35 family with sequence similarity 241 member B protein-coding chr1-2532 chr1 156932105 156932349 + 15.9 0.000 intron (NM_144702, intron 13 of 14) intron (NM_144702, intron 13 of 14) 4017 NR_030527 768220 NR_030527 ENSG00000211581 MIR765 MIRN765|hsa-mir-765|mir-765 microRNA 765 ncRNA chr9-1238 chr9 84754433 84754677 + 15.9 0.000 intron (NM_001018064, intron 12 of 17) intron (NM_001018064, intron 12 of 17) 48654 NM_001369552 4915 Hs.494312 NM_006180 ENSG00000148053 NTRK2 EIEE58|GP145-TrkB|OBHD|TRKB|trk-B neurotrophic receptor tyrosine kinase 2 protein-coding chr12-680 chr12 100573420 100573664 + 15.9 0.000 promoter-TSS (NM_001363672) promoter-TSS (NM_001363672) -142 NM_001363672 283431 Hs.20575 NM_174942 ENSG00000139354 GAS2L3 G2L3 growth arrest specific 2 like 3 protein-coding chr6-733 chr6 134826936 134827180 + 15.9 0.000 Intergenic Intergenic 123043 NM_022568 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding chr3-638 chr3 196081980 196082224 + 15.9 0.000 promoter-TSS (NM_003234) promoter-TSS (NM_003234) -12 NM_001313966 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr14-459 chr14 105142807 105143051 + 15.9 0.000 exon (NM_002226, exon 26 of 26) exon (NM_002226, exon 26 of 26) 7935 NR_106823 102465458 NR_106823 ENSG00000273778 MIR6765 hsa-mir-6765 microRNA 6765 ncRNA chr3-846 chr3 64214135 64214379 + 15.9 0.000 intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) 11209 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding chr2-850 chr2 94208805 94209049 + 15.9 0.000 promoter-TSS (NR_146105) promoter-TSS (NR_146105) -508 NR_146110 728034 NR_146105 BMS1P14 - BMS1 pseudogene 14 pseudo chr12-1220 chr12 109768918 109769162 + 15.9 0.000 exon (NM_032829, exon 3 of 3) exon (NM_032829, exon 3 of 3) 4447 NR_026662 84983 Hs.675961 NM_032897 ENSG00000255650 FAM222A-AS1 - FAM222A antisense RNA 1 ncRNA chr3-1222 chr3 13504504 13504748 + 15.9 0.000 exon (NM_001330636, exon 7 of 7) exon (NM_001330636, exon 7 of 7) 24320 NM_001330636 79885 Hs.744132 NM_024827 ENSG00000163517 HDAC11 HD11 histone deacetylase 11 protein-coding chr12-753 chr12 57844772 57845016 + 15.9 0.000 intron (NM_005730, intron 1 of 7) (CTCC)n|Simple_repeat|Simple_repeat 1835 NM_005730 10106 Hs.524530 NM_005730 ENSG00000175215 CTDSP2 OS4|PSR2|SCP2 CTD small phosphatase 2 protein-coding chr8-804 chr8 14035252 14035496 + 15.9 0.000 Intergenic Intergenic 405684 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA chr1-1873 chr1 172154622 172154866 + 15.9 0.000 intron (NR_146559, intron 15 of 20) intron (NR_146559, intron 15 of 20) -9909 NR_038397 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA chr1-2001 chr1 22704388 22704632 + 15.9 0.000 Intergenic Intergenic -6328 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr17-315 chr17 50707238 50707482 + 15.9 0.000 intron (NM_052855, intron 1 of 4) CpG 554 NM_052855 91369 Hs.463426 NM_052855 ENSG00000154945 ANKRD40 - ankyrin repeat domain 40 protein-coding chr2-1753 chr2 85853000 85853244 + 15.9 0.000 5' UTR (NM_001354248, exon 1 of 6) 5' UTR (NM_001354248, exon 1 of 6) 1049 NM_001354248 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chr22-624 chr22 22910697 22910941 + 15.9 0.000 Intergenic Intergenic 23003 NM_001178126 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr8-811 chr8 19958865 19959109 + 15.9 0.000 intron (NM_000237, intron 6 of 9) intron (NM_000237, intron 6 of 9) 19734 NM_000237 4023 Hs.180878 NM_000237 ENSG00000175445 LPL HDLCQ11|LIPD lipoprotein lipase protein-coding chr12-463 chr12 13101214 13101458 + 15.9 0.000 intron (NM_001080555, intron 1 of 6) CpG 2331 NM_001367364 83445 Hs.240053 NM_031289 ENSG00000111305 GSG1 - germ cell associated 1 protein-coding chr20-485 chr20 32743567 32743811 + 15.9 0.000 5' UTR (NM_053041, exon 1 of 9) 5' UTR (NM_053041, exon 1 of 9) 319 NM_001099339 149951 Hs.408427 NM_053041 ENSG00000149600 COMMD7 C20orf92|dJ1085F17.3 COMM domain containing 7 protein-coding chr1-1350 chr1 63877876 63878120 + 15.9 0.000 intron (NM_005012, intron 1 of 8) intron (NM_005012, intron 1 of 8) 103981 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr10-1305 chr10 121853766 121854010 + 15.9 0.000 intron (NM_001001976, intron 8 of 11) MLT1A0|LTR|ERVL-MaLR 74143 NM_007041 11101 Hs.632080 NM_007041 ENSG00000107669 ATE1 - arginyltransferase 1 protein-coding chr19-1579 chr19 33795577 33795821 + 15.9 0.000 Intergenic CpG -1171 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding chr7-1331 chr7 85287174 85287418 + 15.9 0.000 Intergenic Intergenic -133826 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr1-2098 chr1 181936010 181936254 + 15.9 0.000 Intergenic Intergenic 125580 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding chr9-1275 chr9 105695278 105695522 + 15.9 0.000 intron (NM_018112, intron 1 of 5) intron (NM_018112, intron 1 of 5) 859 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding chr1-429 chr1 232629949 232630193 + 15.9 0.000 Intergenic CpG -88000 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr1-670 chr1 247448104 247448348 + 15.9 0.000 intron (NM_001127462, intron 7 of 7) (CGG)n|Simple_repeat|Simple_repeat 3756 NM_001004492 127623 Hs.446999 NM_001004492 ENSG00000177535 OR2B11 - olfactory receptor family 2 subfamily B member 11 protein-coding chr12-1182 chr12 94753925 94754169 + 15.9 0.000 Intergenic Intergenic -80351 NR_030171 574449 NR_030171 ENSG00000283998 MIR492 MIRN492|hsa-mir-492 microRNA 492 ncRNA chr1-1848 chr1 156725934 156726178 + 15.9 0.000 intron (NM_001370151, intron 2 of 3) intron (NM_001370151, intron 2 of 3) 2383 NM_001303095 81875 Hs.301904 NM_030980 ENSG00000143319 ISG20L2 HSD38 interferon stimulated exonuclease gene 20 like 2 protein-coding chr4-1025 chr4 93867040 93867284 + 15.9 0.000 Intergenic Intergenic 38409 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr17-1063 chr17 80445706 80445950 + 15.9 0.000 Intergenic Intergenic 26410 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr2-690 chr2 120915170 120915414 + 15.9 0.000 intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 123011 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding chrX-566 chrX 153900881 153901125 + 15.9 0.000 Intergenic Intergenic -1622 NR_027419 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr12-827 chr12 48788177 48788421 + 15.7 0.000 promoter-TSS (NR_110019) promoter-TSS (NR_110019) 790 NM_015270 112 Hs.525401 NM_015270 ENSG00000174233 ADCY6 AC6|LCCS8 adenylate cyclase 6 protein-coding chr16-762 chr16 181225 181469 + 15.7 0.000 TTS (NM_005331) TTS (NM_005331) 888 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr13-447 chr13 36778053 36778297 + 15.7 0.000 Intergenic L1PREC2|LINE|L1 -41027 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr10-1004 chr10 69335063 69335307 + 15.7 0.000 intron (NM_001322367, intron 1 of 16) intron (NM_001322367, intron 1 of 16) 16338 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr4-686 chr4 38190940 38191184 + 15.7 0.000 Intergenic Intergenic 71108 NM_001253915 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr11-292 chr11 19712642 19712886 + 15.7 0.000 promoter-TSS (NM_001244963) promoter-TSS (NM_001244963) -73 NM_145117 89797 Hs.64341 NM_145117 ENSG00000166833 NAV2 HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 neuron navigator 2 protein-coding chr1-863 chr1 111619614 111619858 + 15.7 0.000 promoter-TSS (NM_001010935) promoter-TSS (NM_001010935) -47 NM_002884 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding chr14-590 chr14 103550619 103550863 + 15.7 0.000 Intergenic Intergenic 11579 NM_004873 9529 Hs.5443 NM_004873 ENSG00000166170 BAG5 BAG-5 BCL2 associated athanogene 5 protein-coding chr14-181 chr14 53953514 53953758 + 15.7 0.000 promoter-TSS (NM_001347915) promoter-TSS (NM_001347915) -161 NM_001347914 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding chr12-699 chr12 121133175 121133419 + 15.7 0.000 intron (NR_033953, intron 1 of 10) intron (NR_033953, intron 1 of 10) 421 NM_002562 5027 Hs.439682 NM_002562 ENSG00000089041 P2RX7 P2X7 purinergic receptor P2X 7 protein-coding chr8-946 chr8 120318965 120319209 + 15.7 0.000 intron (NM_021110, intron 40 of 47) intron (NM_021110, intron 40 of 47) 126063 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding chr11-1597 chr11 75547670 75547914 + 15.7 0.000 Intergenic Intergenic -14461 NM_001235 871 Hs.596449 NM_001235 ENSG00000149257 SERPINH1 AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46 serpin family H member 1 protein-coding chr3-1490 chr3 185926378 185926622 + 15.7 0.000 intron (NM_001243879, intron 1 of 7) intron (NM_001243879, intron 1 of 7) 11514 NM_001243879 6434 Hs.533122 NM_004593 ENSG00000136527 TRA2B Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B transformer 2 beta homolog protein-coding chr9-1059 chr9 14993130 14993374 + 15.7 0.000 promoter-TSS (NR_003920) promoter-TSS (NR_003920) -75 NR_003920 389705 Hs.431257 NR_003920 LOC389705 - histone PARylation factor 1 pseudogene pseudo chr13-89 chr13 37000220 37000464 + 15.7 0.000 promoter-TSS (NM_001142364) promoter-TSS (NM_001142364) -444 NM_181503 11340 Hs.294041 NM_181503 ENSG00000120699 EXOSC8 CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9 exosome component 8 protein-coding chr12-1211 chr12 108504271 108504515 + 15.7 0.000 Intergenic Intergenic -10884 NM_007076 11153 Hs.661891 NM_007076 ENSG00000198855 FICD HIP13|HYPE|UNQ3041 FIC domain containing protein-coding chr16-1213 chr16 86059527 86059771 + 15.7 0.000 Intergenic Intergenic -136532 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA chr3-1151 chr3 126961251 126961495 + 15.7 0.000 TTS (NM_001320610) TTS (NM_001320610) -27221 NM_032242 5361 Hs.432329 NM_032242 ENSG00000114554 PLXNA1 NOV|NOVP|PLEXIN-A1|PLXN1 plexin A1 protein-coding chr7-610 chr7 2269571 2269815 + 15.7 0.000 intron (NM_013321, intron 4 of 10) intron (NM_013321, intron 4 of 10) -12116 NR_106895 102465503 NR_106895 ENSG00000284047 MIR6836 hsa-mir-6836 microRNA 6836 ncRNA chr6-850 chr6 130996978 130997222 + 15.7 0.000 intron (NM_001135554, intron 1 of 14) intron (NM_001135554, intron 1 of 14) 3667 NM_001252660 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding chr10-851 chr10 69803623 69803867 + 15.7 0.000 intron (NM_080801, intron 1 of 38) MIRb|SINE|MIR 1839 NM_001368884 1305 Hs.695934 NM_005203 ENSG00000197467 COL13A1 CMS19|COLXIIIA1 collagen type XIII alpha 1 chain protein-coding GL000216.2-7 GL000216.2 165089 165333 + 15.7 0.000 NA NA NA NA chr5-949 chr5 171426093 171426337 + 15.7 0.000 intron (NM_003862, intron 2 of 4) intron (NM_003862, intron 2 of 4) 6568 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chr12-1109 chr12 51847184 51847428 + 15.7 0.000 promoter-TSS (NR_135803) promoter-TSS (NR_135803) -917 NR_135803 105369971 Hs.505582 NR_135803 ENSG00000259887 LOC105369971 - uncharacterized LOC105369971 ncRNA chr11-1439 chr11 29272095 29272339 + 15.7 0.000 Intergenic MER20|DNA|hAT-Charlie -322196 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA chr9-297 chr9 38392520 38392764 + 15.7 0.000 promoter-TSS (NM_000692) promoter-TSS (NM_000692) -60 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr7-1052 chr7 151061034 151061278 + 15.7 0.000 intron (NM_003040, intron 1 of 22) intron (NM_003040, intron 1 of 22) -1391 NM_001199693 6522 Hs.647069 NM_003040 ENSG00000164889 SLC4A2 AE2|BND3L|EPB3L1|HKB3|NBND3 solute carrier family 4 member 2 protein-coding chr5-989 chr5 15380604 15380848 + 15.7 0.000 Intergenic MSTA|LTR|ERVL-MaLR -114166 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA chr11-1237 chr11 130738141 130738385 + 15.7 0.000 Intergenic Intergenic 65307 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding chr4-309 chr4 2843186 2843430 + 15.7 0.000 promoter-TSS (NM_001354754) promoter-TSS (NM_001354754) -536 NM_001354756 118 Hs.183706 NM_001119 ENSG00000087274 ADD1 ADDA adducin 1 protein-coding chr18-204 chr18 48452963 48453207 + 15.7 0.000 Intergenic Intergenic -40500 NM_001371287 chr9-1326 chr9 126158972 126159216 + 15.7 0.000 Intergenic MIRb|SINE|MIR 116821 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr1-1136 chr1 16922160 16922404 + 15.7 0.000 intron (NM_014675, intron 1 of 36) intron (NM_014675, intron 1 of 36) 351 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chrX-447 chrX 45668729 45668973 + 15.7 0.000 Intergenic Intergenic -62237 NR_102268 392452 Hs.745266 NR_102268 LOC392452 - mitochondrial fission factor pseudogene pseudo chr10-866 chr10 79404486 79404730 + 15.7 0.000 intron (NM_153367, intron 2 of 3) intron (NM_153367, intron 2 of 3) 41016 NM_153367 219654 Hs.523080 NM_153367 ENSG00000165424 ZCCHC24 C10orf56|Z3CXXC8 zinc finger CCHC-type containing 24 protein-coding chr5-603 chr5 132094729 132094973 + 15.7 0.000 Intergenic Intergenic 21062 NM_000758 1437 Hs.1349 NM_000758 ENSG00000164400 CSF2 CSF|GMCSF colony stimulating factor 2 protein-coding chr19-938 chr19 8511528 8511772 + 15.7 0.000 exon (NM_001146175, exon 5 of 8) exon (NM_001146175, exon 5 of 8) 2517 NM_032370 84330 Hs.515114 NM_032370 ENSG00000133250 ZNF414 ZFP414 zinc finger protein 414 protein-coding chr5-871 chr5 32391029 32391273 + 15.7 0.000 intron (NM_016107, intron 11 of 19) Tigger7|DNA|TcMar-Tigger 3324 NR_030305 693164 NR_030305 ENSG00000207956 MIR579 MIRN579|hsa-mir-579 microRNA 579 ncRNA chr9-238 chr9 137146223 137146467 + 15.7 0.000 intron (NM_021569, intron 3 of 18) intron (NM_021569, intron 3 of 18) 7191 NM_000832 2902 Hs.558334 NM_000832 ENSG00000176884 GRIN1 GluN1|MRD8|NDHMSD|NDHMSR|NMD-R1|NMDA1|NMDAR1|NR1 glutamate ionotropic receptor NMDA type subunit 1 protein-coding chr19-1635 chr19 45716317 45716561 + 15.7 0.000 intron (NM_001329633, intron 1 of 1) intron (NM_001329633, intron 1 of 1) -1161 NM_001329632 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr11-1611 chr11 83541558 83541802 + 15.7 0.000 intron (NM_001142699, intron 20 of 27) intron (NM_001142699, intron 20 of 27) 140745 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr14-807 chr14 104164723 104164967 + 15.7 0.000 intron (NM_015656, intron 4 of 14) (TG)n|Simple_repeat|Simple_repeat 26122 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr12-721 chr12 2893024 2893268 + 15.7 0.000 intron (NM_003324, intron 1 of 10) AluJb|SINE|Alu 2255 NM_001160408 7289 Hs.655333 NM_003324 ENSG00000078246 TULP3 TUBL3 TUB like protein 3 protein-coding chr10-363 chr10 32980585 32980829 + 15.7 0.000 Intergenic CpG -22477 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr13-177 chr13 46211708 46211952 + 15.7 0.000 promoter-TSS (NM_001282460) promoter-TSS (NM_001282460) -98 NM_001282460 220416 Hs.267765 NM_001024609 ENSG00000173988 LRRC63 - leucine rich repeat containing 63 protein-coding chr9-1083 chr9 91522521 91522765 + 15.7 0.000 Intergenic MLT2B4|LTR|ERVL -98017 NM_001289999 4783 Hs.79334 NM_005384 ENSG00000165030 NFIL3 E4BP4|IL3BP1|NF-IL3A|NFIL3A nuclear factor, interleukin 3 regulated protein-coding chr10-1113 chr10 28381823 28382067 + 15.7 0.000 Intergenic Intergenic -78881 NR_134517 143098 Hs.499159 NM_173496 ENSG00000150054 MPP7 - membrane palmitoylated protein 7 protein-coding chr17-1308 chr17 42308289 42308533 + 15.7 0.000 intron (NM_001288718, intron 16 of 18) intron (NM_001288718, intron 16 of 18) 20355 NM_001288719 6776 Hs.437058 NM_003152 ENSG00000126561 STAT5A MGF|STAT5 signal transducer and activator of transcription 5A protein-coding chr2-368 chr2 170162278 170162522 + 15.7 0.000 Intergenic Intergenic -15747 NR_045682 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding chr16-1242 chr16 88959218 88959462 + 15.7 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) 17867 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr7-847 chr7 97238269 97238513 + 15.7 0.000 Intergenic AluSc8|SINE|Alu 121798 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding chr10-88 chr10 41874884 41875128 + 15.7 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 493039 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr17-455 chr17 75574260 75574504 + 15.7 0.000 intron (NM_004524, intron 23 of 24) intron (NM_004524, intron 23 of 24) -13676 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr4-734 chr4 112031794 112032038 + 15.7 0.000 Intergenic Intergenic -113538 NM_152400 132720 Hs.23439 NM_152400 ENSG00000174749 FAM241A C4orf32 family with sequence similarity 241 member A protein-coding chr13-417 chr13 113789934 113790178 + 15.7 0.000 intron (NM_182614, intron 3 of 8) intron (NM_182614, intron 3 of 8) -25554 NR_044995 650669 Hs.369201 NM_001039799 GAS6-AS1 - GAS6 antisense RNA 1 ncRNA chr17-1415 chr17 76996770 76997014 + 15.7 0.000 Intergenic Intergenic -27693 NR_136416 105371899 Hs.634683 NR_136416 ENSG00000267568 LOC105371899 - uncharacterized LOC105371899 ncRNA chr7-1262 chr7 36159407 36159651 + 15.7 0.000 intron (NM_030636, intron 2 of 7) MIRb|SINE|MIR 6275 NM_030636 80820 Hs.487994 NM_030636 ENSG00000122547 EEPD1 HSPC107 endonuclease/exonuclease/phosphatase family domain containing 1 protein-coding chr7-1377 chr7 107874755 107874999 + 15.7 0.000 Intergenic Intergenic -16230 NM_001289752 1738 Hs.131711 NM_000108 ENSG00000091140 DLD DLDD|DLDH|E3|GCSL|LAD|PHE3 dihydrolipoamide dehydrogenase protein-coding chr19-1227 chr19 31054565 31054809 + 15.7 0.000 Intergenic LTR33C|LTR|ERVL -112823 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr16-875 chr16 85286273 85286517 + 15.7 0.000 intron (NR_038859, intron 2 of 2) intron (NR_038859, intron 2 of 2) 3437 NR_038859 197196 Hs.679002 NM_153238 ENSG00000179219 LINC00311 NCRNA00311|TMEM148 long intergenic non-protein coding RNA 311 ncRNA chr17-1204 chr17 843150 843394 + 15.7 0.000 intron (NM_022463, intron 1 of 7) intron (NM_022463, intron 1 of 7) 20839 NM_001205319 64359 Hs.527989 NM_022463 ENSG00000167693 NXN NRX|TRG-4 nucleoredoxin protein-coding chr3-523 chr3 48301306 48301550 + 15.7 0.000 promoter-TSS (NM_001308427) promoter-TSS (NM_001308427) -17 NM_001308427 10201 Hs.465558 NM_005793 ENSG00000172113 NME6 IPIA-ALPHA|NDK 6|NM23-H6 NME/NM23 nucleoside diphosphate kinase 6 protein-coding chr6-888 chr6 3156308 3156552 + 15.7 0.000 intron (NM_001069, intron 1 of 3) intron (NM_001069, intron 1 of 3) 1114 NM_001069 7280 Hs.654543 NM_001069 ENSG00000137267 TUBB2A CDCBM5|TUBB|TUBB2 tubulin beta 2A class IIa protein-coding chr3-1088 chr3 4582761 4583005 + 15.7 0.000 intron (NM_001168272, intron 4 of 60) intron (NM_001168272, intron 4 of 60) 89535 NM_001168272 3708 Hs.567295 NM_002222 ENSG00000150995 ITPR1 ACV|CLA4|INSP3R1|IP3R|IP3R1|PPP1R94|SCA15|SCA16|SCA29 inositol 1,4,5-trisphosphate receptor type 1 protein-coding chr2-1924 chr2 216490044 216490288 + 15.7 0.000 Intergenic Intergenic -8678 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr16-1135 chr16 58451710 58451954 + 15.7 0.000 Intergenic Intergenic -11813 NM_020465 65009 Hs.322430 NM_020465 ENSG00000103034 NDRG4 BDM1|SMAP-8|SMAP8 NDRG family member 4 protein-coding chr17-1338 chr17 50576089 50576333 + 15.7 0.000 exon (NM_001256328, exon 8 of 35) exon (NM_001256328, exon 8 of 35) -14103 NR_038439 253962 Hs.558704 NR_038439 ENSG00000250107 CACNA1G-AS1 CAS1 CACNA1G antisense RNA 1 ncRNA chr4-649 chr4 1785851 1786095 + 15.7 0.000 Intergenic Intergenic -7320 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-959 chr12 49904130 49904374 + 15.7 0.000 promoter-TSS (NM_012306) promoter-TSS (NM_012306) -352 NM_012306 23017 Hs.567424 NM_012306 ENSG00000135472 FAIM2 LFG|LFG2|NGP35|NMP35|TMBIM2 Fas apoptotic inhibitory molecule 2 protein-coding chr6-792 chr6 35503759 35504003 + 15.7 0.000 intron (NM_001289395, intron 10 of 13) intron (NM_001289395, intron 10 of 13) -6802 NM_003214 7005 Hs.485205 NM_003214 ENSG00000007866 TEAD3 DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5 TEA domain transcription factor 3 protein-coding chr15-554 chr15 45994394 45994638 + 15.7 0.000 Intergenic LTR16A|LTR|ERVL 289321 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr11-1649 chr11 118532207 118532451 + 15.7 0.000 exon (NM_032780, exon 3 of 9) exon (NM_032780, exon 3 of 9) 1137 NM_032780 84866 Hs.564188 NM_032780 ENSG00000149582 TMEM25 - transmembrane protein 25 protein-coding chr5-1040 chr5 58259795 58260039 + 15.7 0.000 Intergenic Intergenic -137576 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA chr14-676 chr14 104880400 104880644 + 15.7 0.000 intron (NM_001112726, intron 6 of 18) intron (NM_001112726, intron 6 of 18) 15208 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr22-521 chr22 44062677 44062921 + 15.7 0.000 intron (NM_001243386, intron 1 of 11) MER21C|LTR|ERVL -6318 NM_001243385 29780 Hs.475074 NM_013327 ENSG00000188677 PARVB CGI-56 parvin beta protein-coding chr1-2466 chr1 103827111 103827355 + 15.7 0.000 Intergenic MLT1F|LTR|ERVL-MaLR 77392 NM_001008218 277 Hs.599274 NM_001008218 ENSG00000174876 AMY1B AMY1 amylase alpha 1B (salivary) protein-coding chr4-423 chr4 107824680 107824924 + 15.7 0.000 intron (NM_001136258, intron 1 of 6) intron (NM_001136258, intron 1 of 6) 237 NM_001136258 166929 Hs.595423 NM_152621 ENSG00000164023 SGMS2 SMS2 sphingomyelin synthase 2 protein-coding chr22-186 chr22 46037464 46037708 + 15.7 0.000 Intergenic Intergenic 7282 NR_027036 100271722 Hs.528519 NR_027036 LINC00899 - long intergenic non-protein coding RNA 899 ncRNA chr4-566 chr4 184514304 184514548 + 15.7 0.000 intron (NR_147158, intron 1 of 2) intron (NR_147158, intron 1 of 2) 23157 NR_147158 105377585 Hs.519127 NR_147158 ENSG00000271538 LINC02427 - long intergenic non-protein coding RNA 2427 ncRNA chr7-1171 chr7 658914 659158 + 15.7 0.000 intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 53488 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding chr8-815 chr8 22221576 22221820 + 15.7 0.000 exon (NM_001363312, exon 5 of 6) exon (NM_001363312, exon 5 of 6) 10401 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr1-1584 chr1 219461157 219461401 + 15.7 0.000 intron (NR_135822, intron 2 of 3) intron (NR_135822, intron 2 of 3) 96045 NR_135822 102723886 Hs.525963 NR_135822 LYPLAL1-AS1 - LYPLAL1 antisense RNA 1 ncRNA chr3-444 chr3 48918765 48919009 + 15.7 0.000 promoter-TSS (NM_001349227) promoter-TSS (NM_001349227) 45 NM_001349217 10425 Hs.633601 NM_006321 ENSG00000177479 ARIH2 ARI2|TRIAD1 ariadne RBR E3 ubiquitin protein ligase 2 protein-coding chr7-570 chr7 66742460 66742704 + 15.7 0.000 intron (NM_001367749, intron 1 of 4) L2c|LINE|L2 1849 NM_014504 27342 Hs.530053 NM_014504 ENSG00000154710 RABGEF1 RABEX5|RAP1|rabex-5 RAB guanine nucleotide exchange factor 1 protein-coding chr14-772 chr14 94588263 94588507 + 15.7 0.000 intron (NM_000624, intron 3 of 5) intron (NM_000624, intron 3 of 5) 6959 NM_000624 5104 Hs.159628 NM_000624 ENSG00000188488 SERPINA5 PAI-3|PAI3|PCI|PCI-B|PLANH3|PROCI serpin family A member 5 protein-coding chr20-668 chr20 63536938 63537182 + 15.7 0.000 intron (NM_005975, intron 1 of 7) intron (NM_005975, intron 1 of 7) 310 NM_001256358 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr4-801 chr4 10584093 10584337 + 15.7 0.000 intron (NM_052964, intron 4 of 18) intron (NM_052964, intron 4 of 18) 100553 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr12-1259 chr12 123580449 123580693 + 15.7 0.000 TTS (NR_110049) TTS (NR_110049) 3756 NR_110049 101927415 Hs.636524 NR_110049 TMED2-DT - TMED2 divergent transcript ncRNA chr8-497 chr8 66123792 66124036 + 15.7 0.000 Intergenic Intergenic -3215 NM_184086 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding chr1-2480 chr1 112675473 112675717 + 15.7 0.000 intron (NM_001321324, intron 2 of 20) intron (NM_001321324, intron 2 of 20) 857 NM_001369507 4343 Hs.514941 NM_020963 ENSG00000155363 MOV10 fSAP113|gb110 Mov10 RISC complex RNA helicase protein-coding chr1-2027 chr1 41496258 41496502 + 15.7 0.000 Intergenic CpG -11697 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr15-611 chr15 33045227 33045471 + 15.7 0.000 intron (NM_001277313, intron 6 of 20) MER52A|LTR|ERV1 22825 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chrX-316 chrX 90617882 90618126 + 15.7 0.000 Intergenic LTR12E|LTR|ERV1 696096 NM_138960 90316 Hs.592220 NM_138960 ENSG00000153779 TGIF2LX TGIFLX TGFB induced factor homeobox 2 like X-linked protein-coding chr12-660 chr12 57766313 57766557 + 15.7 0.000 intron (NM_000785, intron 1 of 8) intron (NM_000785, intron 1 of 8) 643 NM_000785 1594 Hs.524528 NM_000785 ENSG00000111012 CYP27B1 CP2B|CYP1|CYP1alpha|CYP27B|P450c1|PDDR|VDD1|VDDR|VDDRI|VDR cytochrome P450 family 27 subfamily B member 1 protein-coding chr20-451 chr20 57440808 57441052 + 15.7 0.000 Intergenic Intergenic -47874 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chrX-415 chrX 9566360 9566604 + 15.7 0.000 intron (NM_001139468, intron 3 of 17) intron (NM_001139468, intron 3 of 17) 101424 NM_005647 6907 Hs.495656 NM_005647 ENSG00000101849 TBL1X EBI|SMAP55|TBL1 transducin beta like 1 X-linked protein-coding chrX-81 chrX 120560769 120561013 + 15.7 0.000 promoter-TSS (NM_001079872) promoter-TSS (NM_001079872) 71 NM_001079872 8450 Hs.102914 NM_003588 ENSG00000158290 CUL4B CUL-4B|MRXHF2|MRXS15|MRXSC|SFM2 cullin 4B protein-coding chr10-1246 chr10 98295985 98296229 + 15.7 0.000 Intergenic Charlie19a|DNA|hAT-Charlie -27913 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding chr16-240 chr16 11255976 11256220 + 15.7 0.000 promoter-TSS (NM_003745) promoter-TSS (NM_003745) 84 NM_003745 8651 Hs.50640 NM_003745 ENSG00000185338 SOCS1 CIS1|CISH1|JAB|SOCS-1|SSI-1|SSI1|TIP-3|TIP3 suppressor of cytokine signaling 1 protein-coding chr4-270 chr4 99950348 99950592 + 15.7 0.000 promoter-TSS (NR_125923) promoter-TSS (NR_125923) -24 NR_125923 256880 Hs.448554 NR_002799 ENSG00000245322 LOC256880 - uncharacterized LOC256880 ncRNA chr10-1185 chr10 71965937 71966181 + 15.7 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 1664 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr1-1453 chr1 228109403 228109647 + 15.7 0.000 promoter-TSS (NM_181462) promoter-TSS (NM_181462) -213 NM_181462 128308 Hs.63236 NM_181441 ENSG00000162910 MRPL55 AAVG5835|L55nt|MRP-L55|PRO19675 mitochondrial ribosomal protein L55 protein-coding chr12-732 chr12 25250339 25250583 + 15.7 0.000 intron (NM_001369786, intron 1 of 5) CpG 468 NM_004985 3845 Hs.505033 NM_004985 ENSG00000133703 KRAS C-K-RAS|CFC2|K-RAS2A|K-RAS2B|K-RAS4A|K-RAS4B|K-Ras|KI-RAS|KRAS1|KRAS2|NS|NS3|RALD|RASK2|c-Ki-ras2 KRAS proto-oncogene, GTPase protein-coding chr16-1079 chr16 19086695 19086939 + 15.7 0.000 Intergenic CpG 18170 NM_001370489 10229 Hs.157113 NM_016138 ENSG00000167186 COQ7 CAT5|CLK-1|CLK1|COQ10D8 coenzyme Q7, hydroxylase protein-coding chr20-234 chr20 38962216 38962460 + 15.7 0.000 promoter-TSS (NR_033905) promoter-TSS (NR_033905) -6 NM_001190809 60625 Hs.444520 NM_021931 ENSG00000101452 DHX35 C20orf15|DDX35|KAIA0875 DEAH-box helicase 35 protein-coding chr2-1720 chr2 66072734 66072978 + 15.7 0.000 Intergenic Intergenic 285472 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA chr1-1997 chr1 20619052 20619296 + 15.7 0.000 TTS (NM_001785) TTS (NM_001785) -14284 NM_032409 65018 Hs.389171 NM_032409 ENSG00000158828 PINK1 BRPK|PARK6 PTEN induced kinase 1 protein-coding chrX-387 chrX 104136425 104136669 + 15.7 0.000 intron (NM_001012755, intron 1 of 1) intron (NM_001012755, intron 1 of 1) -11915 NR_039980 286437 Hs.656786 NR_039980 LOC286437 - uncharacterized LOC286437 ncRNA chr1-2185 chr1 3105585 3105829 + 15.7 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) -22268 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1-2341 chr1 36658459 36658703 + 15.7 0.000 Intergenic Intergenic -175267 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr9-723 chr9 133123218 133123462 + 15.7 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) -2100 NM_006266 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chr12-780 chr12 122998487 122998731 + 15.7 0.000 intron (NM_020845, intron 9 of 24) intron (NM_020845, intron 9 of 24) 12119 NR_036187 100422931 NR_036187 ENSG00000265526 MIR4304 - microRNA 4304 ncRNA chr8-542 chr8 144458539 144458783 + 15.7 0.000 intron (NM_138496, intron 2 of 4) intron (NM_138496, intron 2 of 4) 3878 NR_162109 113218512 NR_162109 MIR10400 - microRNA 10400 ncRNA chr22-530 chr22 45563964 45564208 + 15.7 0.000 TTS (NM_001996) TTS (NM_001996) 41561 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA chr15-755 chr15 99969857 99970101 + 15.7 0.000 Intergenic Intergenic 162956 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo chr3-1015 chr3 128726716 128726960 + 15.7 0.000 intron (NM_004637, intron 1 of 5) intron (NM_004637, intron 1 of 5) 702 NM_004637 7879 Hs.684374 NM_004637 ENSG00000075785 RAB7A PRO2706|RAB7 RAB7A, member RAS oncogene family protein-coding chr21-93 chr21 34888603 34888847 + 15.7 0.000 promoter-TSS (NM_001122607) promoter-TSS (NM_001122607) -26 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr1-2354 chr1 40832258 40832502 + 15.7 0.000 intron (NM_004700, intron 10 of 13) intron (NM_004700, intron 10 of 13) 29983 NM_133467 163732 Hs.355820 NM_133467 ENSG00000179862 CITED4 - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 protein-coding chr5-1167 chr5 168046229 168046473 + 15.7 0.000 intron (NM_001080428, intron 3 of 24) intron (NM_001080428, intron 3 of 24) -119494 NR_162139 113219458 NR_162139 MIR12125 - microRNA 12125 ncRNA chr14-513 chr14 36581376 36581620 + 15.7 0.000 intron (NM_014360, intron 1 of 1) CpG 1116 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding chr5-900 chr5 81769292 81769536 + 15.7 0.000 Intergenic Intergenic -18161 NM_001256736 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding chr22-525 chr22 45241256 45241500 + 15.7 0.000 promoter-TSS (NM_001009880) promoter-TSS (NM_001009880) -609 NM_001009880 23313 Hs.592207 NM_015264 ENSG00000100364 KIAA0930 C22orf9|LSC3 KIAA0930 protein-coding chrX-422 chrX 16624700 16624944 + 15.7 0.000 intron (NM_019857, intron 14 of 18) intron (NM_019857, intron 14 of 18) 2263 NR_039762 100616428 NR_039762 ENSG00000265144 MIR548AM - microRNA 548am ncRNA chr3-1445 chr3 152702017 152702261 + 15.7 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -132992 NM_002563 5028 Hs.79881 NM_002563 ENSG00000169860 P2RY1 P2Y1|SARCC purinergic receptor P2Y1 protein-coding chr7-1304 chr7 64357284 64357528 + 15.7 0.000 TTS (NM_001170905) TTS (NM_001170905) 43445 NM_001170905 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding chr17-944 chr17 19770384 19770628 + 15.6 0.000 TTS (NM_001142610) TTS (NM_001142610) -22208 NM_001330150 218 Hs.531682 NM_000691 ENSG00000108602 ALDH3A1 ALDH3|ALDHIII aldehyde dehydrogenase 3 family member A1 protein-coding chr2-1263 chr2 74428578 74428822 + 15.6 0.000 exon (NM_001015055, exon 8 of 12) exon (NM_001015055, exon 8 of 12) 6970 NM_001320824 84058 Hs.643480 NM_032118 ENSG00000005448 WDR54 - WD repeat domain 54 protein-coding chr2-1072 chr2 27723377 27723621 + 15.6 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 7376 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr16-1214 chr16 86511170 86511414 + 15.6 0.000 exon (NM_001451, exon 1 of 2) exon (NM_001451, exon 1 of 2) 765 NM_001451 2294 Hs.155591 NM_001451 ENSG00000103241 FOXF1 ACDMPV|FKHL5|FREAC1 forkhead box F1 protein-coding chr20-412 chr20 19254585 19254829 + 15.6 0.000 intron (NR_024564, intron 6 of 7) intron (NR_024564, intron 6 of 7) 29889 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr17-1121 chr17 28759185 28759429 + 15.6 0.000 exon (NM_001288640, exon 3 of 3) exon (NM_001288640, exon 3 of 3) 15296 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr22-512 chr22 41799912 41800156 + 15.6 0.000 promoter-TSS (NM_001304797) promoter-TSS (NM_001304797) -588 NM_001304797 79879 Hs.474991 NM_024821 ENSG00000100147 CCDC134 - coiled-coil domain containing 134 protein-coding chr1-1685 chr1 24090790 24091034 + 15.6 0.000 exon (NM_152372, exon 12 of 37) exon (NM_152372, exon 12 of 37) 21223 NM_152372 127294 Hs.523413 NM_152372 ENSG00000142661 MYOM3 - myomesin 3 protein-coding chr17-1403 chr17 75570981 75571225 + 15.6 0.000 intron (NM_004524, intron 17 of 24) intron (NM_004524, intron 17 of 24) -16955 NM_001309242 80022 Hs.390817 NM_001080847 ENSG00000266714 MYO15B MYO15BP myosin XVB protein-coding chr19-1287 chr19 49895692 49895936 + 15.6 0.000 intron (NR_047577, intron 6 of 10) intron (NR_047577, intron 6 of 10) 1073 NM_152899 259307 Hs.574492 NM_152899 ENSG00000104951 IL4I1 FIG1|LAAO|LAO interleukin 4 induced 1 protein-coding chr19-993 chr19 44845761 44846005 + 15.6 0.000 promoter-TSS (NM_002856) promoter-TSS (NM_002856) -414 NM_002856 5819 Hs.655455 NM_002856 ENSG00000130202 NECTIN2 CD112|HVEB|PRR2|PVRL2|PVRR2 nectin cell adhesion molecule 2 protein-coding chr17-1039 chr17 75896491 75896735 + 15.6 0.000 exon (NM_173547, exon 1 of 6) exon (NM_173547, exon 1 of 6) 338 NM_001256124 201292 Hs.189823 NM_173547 ENSG00000141569 TRIM65 4732463G12Rik tripartite motif containing 65 protein-coding chr11-1483 chr11 47254766 47255010 + 15.6 0.000 intron (NM_001130102, intron 1 of 8) intron (NM_001130102, intron 1 of 8) -2819 NM_001363595 10062 Hs.438863 NM_005693 ENSG00000025434 NR1H3 LXR-a|LXRA|RLD-1 nuclear receptor subfamily 1 group H member 3 protein-coding chr13-379 chr13 33120086 33120330 + 15.6 0.000 intron (NM_178007, intron 7 of 13) intron (NM_178007, intron 7 of 13) 65883 NM_178007 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr11-1650 chr11 118947807 118948051 + 15.6 0.000 Intergenic L2b|LINE|L2 -8369 NM_006760 7379 Hs.379613 NM_006760 ENSG00000110375 UPK2 UP2|UPII uroplakin 2 protein-coding chrX-246 chrX 41440227 41440471 + 15.6 0.000 Intergenic MLT1K|LTR|ERVL-MaLR -7111 NM_022567 60506 Hs.302019 NM_022567 ENSG00000188937 NYX CLRP|CSNB1|CSNB1A|CSNB4|NBM1 nyctalopin protein-coding chr11-1675 chr11 128956653 128956897 + 15.6 0.000 Intergenic Intergenic -13376 NM_001251964 63970 Hs.160953 NM_022112 ENSG00000120471 TP53AIP1 P53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 protein-coding chr1-1663 chr1 16971458 16971702 + 15.6 0.000 exon (NM_014675, exon 36 of 37) exon (NM_014675, exon 36 of 37) 9040 NM_002403 4237 Hs.389137 NM_002403 ENSG00000117122 MFAP2 MAGP|MAGP-1|MAGP1 microfibril associated protein 2 protein-coding chr20-381 chr20 50691714 50691958 + 15.6 0.000 promoter-TSS (NR_110890) promoter-TSS (NR_110890) -294 NR_110890 140876 Hs.372578 NM_080829 ENSG00000042062 RIPOR3 C20orf175|C20orf176|FAM65C RIPOR family member 3 protein-coding chr2-1865 chr2 169716247 169716491 + 15.6 0.000 intron (NR_144936, intron 3 of 4) HERVL18-int|LTR|ERVL -17463 NM_144711 151230 Hs.655150 NM_144711 ENSG00000213160 KLHL23 DITHP kelch like family member 23 protein-coding chrX-202 chrX 50409198 50409442 + 15.6 0.000 intron (NM_001013742, intron 4 of 27) MLT1C|LTR|ERVL-MaLR 61505 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr17-1195 chr17 82300683 82300927 + 15.6 0.000 Intergenic Intergenic -7991 NR_135639 101929511 Hs.147682 NR_135639 ENSG00000265692 LINC01970 - long intergenic non-protein coding RNA 1970 ncRNA chr9-1098 chr9 111042134 111042378 + 15.6 0.000 Intergenic Intergenic -3258 NM_001351399 1902 Hs.126667 NM_001401 ENSG00000198121 LPAR1 EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 lysophosphatidic acid receptor 1 protein-coding chr4-1088 chr4 153318855 153319099 + 15.6 0.000 intron (NM_001351057, intron 9 of 12) intron (NM_001351057, intron 9 of 12) -10166 NR_001562 303 Hs.546235 NR_001562 ANXA2P1 ANX2L1|ANX2P1|LPC2A annexin A2 pseudogene 1 pseudo chr6-506 chr6 37137664 37137908 + 15.6 0.000 Intergenic Intergenic -32366 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding chr1-2118 chr1 212311961 212312205 + 15.6 0.000 intron (NM_001199756, intron 1 of 12) Tigger3b|DNA|TcMar-Tigger 10225 NM_001199756 5525 Hs.744012 NM_006243 ENSG00000066027 PPP2R5A B56A|B56alpha|PR61A protein phosphatase 2 regulatory subunit B'alpha protein-coding chr10-1317 chr10 124885314 124885558 + 15.6 0.000 Intergenic Intergenic -56687 NM_017580 54764 Hs.595158 NM_017580 ENSG00000019995 ZRANB1 TRABID zinc finger RANBP2-type containing 1 protein-coding chr7-523 chr7 100675610 100675854 + 15.6 0.000 intron (NM_005273, intron 1 of 9) CpG 1992 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr8-972 chr8 133389368 133389612 + 15.6 0.000 Intergenic L2c|LINE|L2 -92186 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr11-1654 chr11 119964411 119964655 + 15.6 0.000 Intergenic Intergenic 164320 NM_001330382 23650 Hs.504115 NM_012101 ENSG00000137699 TRIM29 ATDC tripartite motif containing 29 protein-coding chr11-1433 chr11 20221776 20222020 + 15.6 0.000 Intergenic Intergenic -61423 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr9-1020 chr9 135781119 135781363 + 15.6 0.000 intron (NM_001272003, intron 23 of 30) intron (NM_001272003, intron 23 of 30) 79056 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr11-1351 chr11 111793891 111794135 + 15.6 0.000 intron (NM_001352420, intron 14 of 15) intron (NM_001352420, intron 14 of 15) -27624 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding chr10-801 chr10 21715595 21715839 + 15.6 0.000 intron (NM_001195626, intron 14 of 22) intron (NM_001195626, intron 14 of 22) 181545 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr18-268 chr18 23958195 23958439 + 15.6 0.000 Intergenic Intergenic -34570 NM_153211 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr4-945 chr4 36396846 36397090 + 15.6 0.000 Intergenic Intergenic 29460 NR_031701 100313806 NR_031701 ENSG00000283207 MIR1255B1 MIR1255B-1|MIRN1255B1 microRNA 1255b-1 ncRNA chr5-861 chr5 3212306 3212550 + 15.6 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 34593 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA chr1-1451 chr1 227735310 227735554 + 15.6 0.000 promoter-TSS (NM_001323934) promoter-TSS (NM_001323934) -3 NR_136657 116841 Hs.325081 NM_053052 ENSG00000143740 SNAP47 C1orf142|ESFI5812|HEL-S-290|HEL170|SNAP-47|SVAP1 synaptosome associated protein 47 protein-coding chr2-1825 chr2 131444861 131445105 + 15.6 0.000 promoter-TSS (NR_002826) promoter-TSS (NR_002826) -89 NR_002826 401010 Hs.452369 NR_002826 NOC2LP2 - NOC2 like nucleolar associated transcriptional repressor pseudogene 2 pseudo chr9-686 chr9 121289213 121289457 + 15.6 0.000 intron (NM_001258030, intron 1 of 16) intron (NM_001258030, intron 1 of 16) 2786 NM_001258030 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr2-1653 chr2 28810703 28810947 + 15.6 0.000 promoter-TSS (NM_001142634) promoter-TSS (NM_001142634) -9 NM_182756 245711 Hs.511956 NM_182756 ENSG00000163806 SPDYA RINGO3|RINGOA|SPDY1|SPY1 speedy/RINGO cell cycle regulator family member A protein-coding chr3-1421 chr3 138068683 138068927 + 15.6 0.000 TTS (NM_001170538) TTS (NM_001170538) 44675 NM_001170538 199221 Hs.351403 NM_173543 ENSG00000158163 DZIP1L DZIP2|PKD5 DAZ interacting zinc finger protein 1 like protein-coding chr14-376 chr14 84979784 84980028 + 15.6 0.000 Intergenic AluSq|SINE|Alu -292026 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr3-1170 chr3 154304219 154304463 + 15.6 0.000 intron (NM_001114397, intron 8 of 24) MIR|SINE|MIR 20146 NM_020865 170506 Hs.446270 NM_020865 ENSG00000174953 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH-box helicase 36 protein-coding chr4-863 chr4 664219 664463 + 15.6 0.000 intron (NM_000283, intron 17 of 21) CpG-20737 9935 NR_033743 521 Hs.85539 NM_007100 ENSG00000169020 ATP5ME ATP5I|ATP5K ATP synthase membrane subunit e protein-coding chr4-1095 chr4 158723155 158723399 + 15.6 0.000 exon (NM_005038, exon 1 of 10) exon (NM_005038, exon 1 of 10) 119 NM_005038 5481 Hs.183958 NM_005038 ENSG00000171497 PPID CYP-40|CYPD peptidylprolyl isomerase D protein-coding chr15-471 chr15 45414527 45414771 + 15.6 0.000 non-coding (NR_027635, exon 4 of 8) non-coding (NR_027635, exon 4 of 8) 12313 NR_136646 79029 Hs.369657 NM_024063 ENSG00000171763 SPATA5L1 - spermatogenesis associated 5 like 1 protein-coding chr20-249 chr20 3739672 3739916 + 15.6 0.000 intron (NM_001318322, intron 2 of 11) intron (NM_001318322, intron 2 of 11) 7109 NM_052970 116835 Hs.516854 NM_052970 ENSG00000132622 HSPA12B C20orf60 heat shock protein family A (Hsp70) member 12B protein-coding chr7-1312 chr7 70694071 70694315 + 15.6 0.000 intron (NM_015570, intron 5 of 18) CpG -437951 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr19-1098 chr19 38362389 38362633 + 15.6 0.000 exon (NM_021185, exon 19 of 29) exon (NM_021185, exon 19 of 29) -12039 NM_002812 5714 Hs.78466 NM_002812 ENSG00000099341 PSMD8 HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31 proteasome 26S subunit, non-ATPase 8 protein-coding chr5-1046 chr5 61409646 61409890 + 15.6 0.000 intron (NM_020928, intron 1 of 13) intron (NM_020928, intron 1 of 13) 77510 NM_020928 57688 Hs.744939 NM_020928 ENSG00000130449 ZSWIM6 AFND|NEDMAGA zinc finger SWIM-type containing 6 protein-coding chr5-793 chr5 137200207 137200451 + 15.6 0.000 intron (NM_004598, intron 3 of 10) L2a|LINE|L2 72132 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr17-750 chr17 19144426 19144670 + 15.6 0.000 intron (NM_001353418, intron 3 of 3) (AC)n|Simple_repeat|Simple_repeat 16959 NM_001353418 400581 Hs.647426 NM_001129778 ENSG00000189152 GRAPL - GRB2 related adaptor protein like protein-coding chr15-635 chr15 44541499 44541743 + 15.6 0.000 intron (NM_001284336, intron 2 of 5) intron (NM_001284336, intron 2 of 5) 4474 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr1-1874 chr1 172322235 172322479 + 15.6 0.000 intron (NR_146559, intron 17 of 20) intron (NR_146559, intron 17 of 20) -98328 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding chr17-1110 chr17 13114736 13114980 + 15.6 0.000 Intergenic Intergenic -96794 NM_173717 60528 Hs.434232 NM_018127 ENSG00000006744 ELAC2 COXPD17|ELC2|HPC2 elaC ribonuclease Z 2 protein-coding chr9-886 chr9 38005195 38005439 + 15.6 0.000 intron (NM_003028, intron 2 of 5) intron (NM_003028, intron 2 of 5) 63910 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding chr4-526 chr4 71186928 71187172 + 15.6 0.000 promoter-TSS (NM_001134742) promoter-TSS (NM_001134742) -209 NM_001098484 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr2-1429 chr2 241571920 241572164 + 15.6 0.000 intron (NM_032515, intron 4 of 4) intron (NM_032515, intron 4 of 4) -12899 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr15-721 chr15 81327543 81327787 + 15.6 0.000 intron (NR_120365, intron 1 of 6) intron (NR_120365, intron 1 of 6) 3332 NR_120365 101929655 Hs.696654 NR_120365 TMC3-AS1 - TMC3 antisense RNA 1 ncRNA chr9-1311 chr9 123376087 123376331 + 15.6 0.000 intron (NM_173689, intron 12 of 12) intron (NM_173689, intron 12 of 12) 7430 NR_104603 286204 Hs.568340 NM_173689 ENSG00000148204 CRB2 FSGS9|VMCKD crumbs cell polarity complex component 2 protein-coding chr2-1414 chr2 240390469 240390713 + 15.6 0.000 Intergenic Intergenic -45072 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr13-282 chr13 29435145 29435389 + 15.6 0.000 intron (NM_015233, intron 1 of 8) intron (NM_015233, intron 1 of 8) 6607 NM_015233 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding chr10-1204 chr10 79240175 79240419 + 15.6 0.000 intron (NM_020338, intron 7 of 24) intron (NM_020338, intron 7 of 24) -107172 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr1-993 chr1 10956321 10956565 + 15.6 0.000 intron (NM_001366227, intron 6 of 10) intron (NM_001366227, intron 6 of 10) 10244 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr11-1194 chr11 85855062 85855306 + 15.6 0.000 promoter-TSS (NM_173556) promoter-TSS (NM_173556) 83 NM_173556 220047 Hs.567774 NM_173556 ENSG00000150676 CCDC83 CT148|HSD9|KP-CoT-23 coiled-coil domain containing 83 protein-coding chr22-625 chr22 22938195 22938439 + 15.6 0.000 Intergenic (GGAT)n|Simple_repeat|Simple_repeat 50501 NM_001178126 100423062 Hs.449574 NM_001178126 ENSG00000254709 IGLL5 IGL|IGLV|VL-MAR immunoglobulin lambda like polypeptide 5 protein-coding chr12-807 chr12 15337403 15337647 + 15.6 0.000 intron (NM_030667, intron 1 of 26) intron (NM_030667, intron 1 of 26) 15017 NM_030667 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding chr1-2368 chr1 44813298 44813542 + 15.6 0.000 exon (NM_001136537, exon 7 of 8) exon (NM_001136537, exon 7 of 8) 4938 NM_001136537 149478 Hs.632400 NM_001136537 ENSG00000222009 BTBD19 - BTB domain containing 19 protein-coding chr11-957 chr11 124800363 124800607 + 15.6 0.000 promoter-TSS (NM_001312919) promoter-TSS (NM_001312919) 57 NR_103862 100507283 Hs.564177 NR_103862 ENSG00000245498 LOC100507283 - uncharacterized LOC100507283 ncRNA chr2-1023 chr2 204469032 204469276 + 15.6 0.000 Intergenic Intergenic -76321 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding chr9-980 chr9 129202898 129203142 + 15.6 0.000 Intergenic CpG -24759 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr2-1917 chr2 213149247 213149491 + 15.6 0.000 intron (NM_001371277, intron 1 of 6) intron (NM_001371277, intron 1 of 6) 1068 NM_016260 22807 Hs.604950 NM_016260 ENSG00000030419 IKZF2 ANF1A2|HELIOS|ZNF1A2|ZNFN1A2 IKAROS family zinc finger 2 protein-coding chr19-1249 chr19 41917975 41918219 + 15.6 0.000 intron (NM_001365103, intron 1 of 5) intron (NM_001365103, intron 1 of 5) 10624 NM_001365103 390937 Hs.590950 NM_001365103 ENSG00000268041 LOC390937 - ETS domain-containing transcription factor ERF protein-coding chr19-776 chr19 2977315 2977559 + 15.6 0.000 promoter-TSS (NM_024760) promoter-TSS (NM_024760) -127 NM_001143986 79816 Hs.334507 NM_024760 ENSG00000104953 TLE6 GRG6|PREMBL TLE family member 6, subcortical maternal complex member protein-coding chr10-545 chr10 110007490 110007734 + 15.6 0.000 promoter-TSS (NM_016824) promoter-TSS (NM_016824) -372 NM_001320594 120 Hs.501012 NM_001121 ENSG00000148700 ADD3 ADDL|CPSQ3 adducin 3 protein-coding chr16-961 chr16 73019583 73019827 + 15.6 0.000 intron (NM_006885, intron 1 of 9) intron (NM_006885, intron 1 of 9) 28423 NM_006885 463 Hs.598297 NM_006885 ENSG00000140836 ZFHX3 ATBF1|ATBT|ZNF927 zinc finger homeobox 3 protein-coding chr10-1343 chr10 132734210 132734454 + 15.6 0.000 intron (NM_005539, intron 9 of 15) intron (NM_005539, intron 9 of 15) 51815 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding chr11-533 chr11 103109202 103109446 + 15.6 0.000 promoter-TSS (NM_001080463) promoter-TSS (NM_001080463) -102 NM_001377 79659 Hs.503721 NM_001377 ENSG00000187240 DYNC2H1 ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11 dynein cytoplasmic 2 heavy chain 1 protein-coding chr17-500 chr17 50150898 50151142 + 15.6 0.000 promoter-TSS (NM_032595) promoter-TSS (NM_032595) -343 NM_032595 84687 Hs.514323 NM_032595 ENSG00000108819 PPP1R9B PPP1R6|PPP1R9|SPINO|Spn protein phosphatase 1 regulatory subunit 9B protein-coding chr12-297 chr12 57127490 57127734 + 15.6 0.000 promoter-TSS (NM_002332) promoter-TSS (NM_002332) -871 NM_002332 4035 Hs.162757 NM_002332 ENSG00000123384 LRP1 A2MR|APOER|APR|CD91|IGFBP-3R|IGFBP3R|IGFBP3R1|KPA|LRP|LRP1A|TGFBR5 LDL receptor related protein 1 protein-coding chr7-873 chr7 346933 347177 + 15.6 0.000 Intergenic Intergenic -32370 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA chr2-1179 chr2 241559045 241559289 + 15.6 0.000 promoter-TSS (NR_033346) promoter-TSS (NR_033346) -24 NR_033346 100379249 Hs.621128 NR_033346 BOK-AS1 BOK-AS|BOKAS|NAToB|NCRNA00151 BOK antisense RNA 1 ncRNA chr13-367 chr13 112990043 112990287 + 15.6 0.000 intron (NM_001320816, intron 1 of 29) intron (NM_001320816, intron 1 of 29) 10799 NM_001320816 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr9-434 chr9 109036029 109036273 + 15.6 0.000 intron (NM_032012, intron 16 of 17) intron (NM_032012, intron 16 of 17) 10147 NR_029506 407036 NR_029506 ENSG00000207698 MIR32 MIRN32|hsa-mir-32|miR-32|miRNA32 microRNA 32 ncRNA chr17-993 chr17 49560850 49561094 + 15.6 0.000 intron (NR_103773, intron 1 of 2) Tigger1|DNA|TcMar-Tigger 13092 NR_103773 100288866 Hs.720309 NR_103773 ENSG00000249906 LOC100288866 - uncharacterized LOC100288866 ncRNA chr18-71 chr18 21242162 21242406 + 15.6 0.000 promoter-TSS (NM_001142966) promoter-TSS (NM_001142966) 42 NM_001142966 80000 Hs.149020 NM_024935 ENSG00000141449 GREB1L C18orf6|KIAA1772|RHDA3 GREB1 like retinoic acid receptor coactivator protein-coding chr2-636 chr2 175181055 175181299 + 15.6 0.000 intron (NM_001002258, intron 1 of 3) intron (NM_001002258, intron 1 of 3) 533 NM_001689 518 Hs.429 NM_001689 ENSG00000154518 ATP5MC3 ATP5G3|P3 ATP synthase membrane subunit c locus 3 protein-coding chr20-445 chr20 51447380 51447624 + 15.6 0.000 intron (NM_012340, intron 6 of 10) intron (NM_012340, intron 6 of 10) 5475 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr1-2402 chr1 60355516 60355760 + 15.6 0.000 Intergenic L1PA5|LINE|L1 267047 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA chr15-430 chr15 63504006 63504250 + 15.6 0.000 promoter-TSS (NR_046341) promoter-TSS (NR_046341) -383 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr19-996 chr19 45288428 45288672 + 15.6 0.000 intron (NM_001199867, intron 13 of 16) AluSx1|SINE|Alu 34325 NM_001824 1158 Hs.334347 NM_001824 ENSG00000104879 CKM CKMM|CPK-M|M-CK creatine kinase, M-type protein-coding chr12-307 chr12 109358605 109358849 + 15.6 0.000 intron (NR_120462, intron 1 of 2) intron (NR_120462, intron 1 of 2) 761 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr19-1359 chr19 31674808 31675052 + 15.6 0.000 Intergenic Intergenic 82649 NM_001205273 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding chr19-1350 chr19 14470304 14470548 + 15.6 0.000 intron (NM_002741, intron 19 of 21) MIRb|SINE|MIR 4928 NM_000955 5731 Hs.159360 NM_000955 ENSG00000160951 PTGER1 EP1 prostaglandin E receptor 1 protein-coding chr22-490 chr22 37060107 37060351 + 15.6 0.000 intron (NM_001282686, intron 5 of 5) intron (NM_001282686, intron 5 of 5) 8493 NM_001282686 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr8-368 chr8 144546802 144547046 + 15.6 0.000 intron (NM_025251, intron 4 of 10) intron (NM_025251, intron 4 of 10) -17813 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr10-1031 chr10 100983422 100983666 + 15.6 0.000 exon (NM_017893, exon 14 of 14) exon (NM_017893, exon 14 of 14) 3953 NM_001308396 84545 Hs.421848 NM_032112 ENSG00000055950 MRPL43 L43mt|MRP-L43|bMRP36a mitochondrial ribosomal protein L43 protein-coding chrX-423 chrX 17956878 17957122 + 15.6 0.000 Intergenic L1MC1|LINE|L1 -95663 NM_001172732 10742 Hs.446680 NM_021785 ENSG00000131831 RAI2 - retinoic acid induced 2 protein-coding chr1-1885 chr1 184037387 184037631 + 15.6 0.000 5' UTR (NM_001303420, exon 1 of 12) 5' UTR (NM_001303420, exon 1 of 12) 219 NM_015101 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding chr15-426 chr15 55289581 55289825 + 15.6 0.000 intron (NM_183235, intron 1 of 6) CpG 110 NM_183235 5873 Hs.654978 NM_004580 ENSG00000069974 RAB27A GS2|HsT18676|RAB27|RAM RAB27A, member RAS oncogene family protein-coding chr8-749 chr8 58145601 58145845 + 15.6 0.000 intron (NM_147189, intron 4 of 4) CpG 126378 NR_105005 101929528 Hs.563551 NR_105005 ENSG00000253281 LOC101929528 - uncharacterized LOC101929528 ncRNA chr1-911 chr1 3135132 3135376 + 15.6 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 7279 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr1-2161 chr1 1286691 1286935 + 15.6 0.000 non-coding (NR_037668, exon 7 of 17) non-coding (NR_037668, exon 7 of 17) 6377 NM_001130413 6339 Hs.512681 NM_002978 ENSG00000162572 SCNN1D ENaCd|ENaCdelta|SCNED|dNaCh sodium channel epithelial 1 delta subunit protein-coding chr7-348 chr7 94394636 94394880 + 15.6 0.000 5' UTR (NM_000089, exon 1 of 52) 5' UTR (NM_000089, exon 1 of 52) 197 NM_000089 1278 Hs.489142 NM_000089 ENSG00000164692 COL1A2 EDSARTH2|EDSCV|OI4 collagen type I alpha 2 chain protein-coding chr2-1626 chr2 22490382 22490626 + 15.6 0.000 Intergenic MER66A|LTR|ERV1 -45975 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA chr11-1476 chr11 46329583 46329827 + 15.6 0.000 Intergenic Intergenic -3221 NM_201532 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr5-730 chr5 32006095 32006339 + 15.6 0.000 intron (NM_178140, intron 5 of 24) MIR|SINE|MIR -70058 NR_036241 100422874 NR_036241 ENSG00000266243 MIR4279 - microRNA 4279 ncRNA chr9-1421 chr9 136675964 136676208 + 15.6 0.000 intron (NM_001012727, intron 3 of 4) intron (NM_001012727, intron 3 of 4) 5484 NR_029695 406913 NR_029695 ENSG00000199161 MIR126 MIRN126|miRNA126|mir-126 microRNA 126 ncRNA chr21-260 chr21 44458874 44459118 + 15.6 0.000 3' UTR (NM_030891, exon 2 of 2) 3' UTR (NM_030891, exon 2 of 2) 3486 NM_030891 81543 Hs.326579 NM_030891 ENSG00000160233 LRRC3 C21orf102|C21orf30|LRRC3DN leucine rich repeat containing 3 protein-coding chr18-259 chr18 79960266 79960510 + 15.6 0.000 Intergenic LTR5_Hs|LTR|ERVK -4255 NM_001136180 440498 Hs.191582 NM_001136180 ENSG00000226742 HSBP1L1 - heat shock factor binding protein 1 like 1 protein-coding chr11-1412 chr11 6768092 6768336 + 15.6 0.000 exon (NM_001004490, exon 1 of 1) exon (NM_001004490, exon 1 of 1) 743 NM_001004490 338755 Hs.534614 NM_001004490 ENSG00000188124 OR2AG2 OR11-76|OR2AG2P olfactory receptor family 2 subfamily AG member 2 protein-coding chr1-2363 chr1 43316599 43316843 + 15.6 0.000 intron (NM_001253357, intron 14 of 22) intron (NM_001253357, intron 14 of 22) 15739 NM_005424 7075 Hs.78824 NM_005424 ENSG00000066056 TIE1 JTK14|TIE tyrosine kinase with immunoglobulin like and EGF like domains 1 protein-coding chr1-1784 chr1 85258843 85259087 + 15.6 0.000 non-coding (NR_024113, exon 2 of 4) non-coding (NR_024113, exon 2 of 4) 697 NR_024113 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr20-326 chr20 32695952 32696196 + 15.6 0.000 Intergenic Intergenic -22133 NM_182584 284805 Hs.353262 NM_182584 ENSG00000198547 C20orf203 - chromosome 20 open reading frame 203 protein-coding chr11-1409 chr11 5891439 5891683 + 15.6 0.000 Intergenic THE1D|LTR|ERVL-MaLR 7268 NM_001005165 390081 Hs.553739 NM_001005165 ENSG00000180974 OR52E4 OR11-55 olfactory receptor family 52 subfamily E member 4 protein-coding chr21-152 chr21 44300559 44300803 + 15.6 0.000 intron (NM_002626, intron 1 of 21) CpG 628 NM_001002021 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr2-1890 chr2 191020395 191020639 + 15.6 0.000 Intergenic CpG -1009 NR_136318 105373805 Hs.570280 NR_136318 ENSG00000231858 LOC105373805 - uncharacterized LOC105373805 ncRNA chr7-1083 chr7 25180429 25180673 + 15.6 0.000 promoter-TSS (NM_001371351) promoter-TSS (NM_001371351) -197 NM_138811 136895 Hs.122055 NM_138811 ENSG00000153790 C7orf31 - chromosome 7 open reading frame 31 protein-coding chr18-207 chr18 59717825 59718069 + 15.6 0.000 Intergenic AluJb|SINE|Alu -20524 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr8-209 chr8 53032803 53033047 + 15.6 0.000 Intergenic Tigger3a|DNA|TcMar-Tigger 93017 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr1-2511 chr1 153565676 153565920 + 15.6 0.000 promoter-TSS (NM_001366407) promoter-TSS (NM_001366407) 46 NM_005978 6273 Hs.516484 NM_005978 ENSG00000196754 S100A2 CAN19|S100L S100 calcium binding protein A2 protein-coding chr10-1062 chr10 127977962 127978206 + 15.6 0.000 intron (NM_001316676, intron 2 of 21) intron (NM_001316676, intron 2 of 21) -9196 NM_001316677 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr3-1345 chr3 78338049 78338293 + 15.6 0.000 Intergenic Intergenic -289208 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA chr5-753 chr5 72955578 72955822 + 15.6 0.000 promoter-TSS (NM_138782) promoter-TSS (NM_138782) -341 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding chr1-2606 chr1 202144397 202144641 + 15.6 0.000 exon (NM_001256129, exon 1 of 6) exon (NM_001256129, exon 1 of 6) 218 NM_138795 127829 Hs.497399 NM_138795 ENSG00000143862 ARL8A ARL10B|GIE2 ADP ribosylation factor like GTPase 8A protein-coding chr15-566 chr15 62989618 62989862 + 15.6 0.000 Intergenic Intergenic -53007 NM_001018007 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding chr22-540 chr22 46156973 46157217 + 15.4 0.000 intron (NM_001001928, intron 2 of 7) intron (NM_001001928, intron 2 of 7) 6300 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding chr1-2183 chr1 2345554 2345798 + 15.4 0.000 intron (NM_024848, intron 10 of 13) intron (NM_024848, intron 10 of 13) 6985 NR_024489 100129534 Hs.655313 NM_001127577 ENSG00000269896 LOC100129534 - small nuclear ribonucleoprotein polypeptide N pseudogene pseudo chr10-1260 chr10 102385123 102385367 + 15.4 0.000 Intergenic Intergenic -8865 NM_001322935 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr9-977 chr9 128824029 128824273 + 15.4 0.000 exon (NM_016390, exon 10 of 12) exon (NM_016390, exon 10 of 12) 5643 NM_016390 51490 Hs.224137 NM_016390 ENSG00000198917 SPOUT1 C9orf114|CENP-32|CENP32|HSPC109 SPOUT domain containing methyltransferase 1 protein-coding chr20-468 chr20 3166080 3166324 + 15.4 0.000 exon (NM_001282533, exon 4 of 6) exon (NM_001282533, exon 4 of 6) -6337 NM_199415 22888 Hs.654646 NM_014948 ENSG00000185019 UBOX5 RNF37|UBCE7IP5|UIP5|hUIP5 U-box domain containing 5 protein-coding chr9-251 chr9 114397875 114398119 + 15.4 0.000 Intergenic CpG -3592 NM_030767 80709 Hs.494895 NM_030767 ENSG00000106948 AKNA - AT-hook transcription factor protein-coding chr5-1131 chr5 139709482 139709726 + 15.4 0.000 Intergenic CpG 34161 NM_001317209 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chr5-608 chr5 138241755 138241999 + 15.4 0.000 Intergenic CpG -28554 NM_004661 8697 Hs.73625 NM_004661 ENSG00000094880 CDC23 ANAPC8|APC8|CUT23 cell division cycle 23 protein-coding chr5-283 chr5 38753364 38753608 + 15.4 0.000 intron (NR_109951, intron 2 of 3) intron (NR_109951, intron 2 of 3) -33213 NR_104631 101926904 Hs.634191 NR_104631 ENSG00000249740 LINC01265 - long intergenic non-protein coding RNA 1265 ncRNA chr5-1198 chr5 180330734 180330978 + 15.4 0.000 intron (NM_005110, intron 5 of 18) intron (NM_005110, intron 5 of 18) 22480 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr12-511 chr12 25974247 25974491 + 15.4 0.000 intron (NM_001164747, intron 1 of 5) intron (NM_001164747, intron 1 of 5) 614 NM_001164747 11228 Hs.696433 NM_007211 ENSG00000123094 RASSF8 C12orf2|HOJ1 Ras association domain family member 8 protein-coding chr6-1109 chr6 154852966 154853210 + 15.4 0.000 promoter-TSS (NR_036100) promoter-TSS (NR_036100) -272 NR_036100 100422821 NR_036100 ENSG00000264814 MIR1273C - microRNA 1273c ncRNA chr12-1045 chr12 6821174 6821418 + 15.4 0.000 promoter-TSS (NM_014449) promoter-TSS (NM_014449) -525 NM_014449 27239 Hs.631654 NM_014449 ENSG00000250510 GPR162 A-2|GRCA G protein-coupled receptor 162 protein-coding chr2-1304 chr2 127672777 127673021 + 15.4 0.000 intron (NM_001161404, intron 1 of 9) intron (NM_001161404, intron 1 of 9) 2631 NM_001161403 55679 Hs.469881 NM_017980 ENSG00000072163 LIMS2 LGMD2W|MDRCMTT|PINCH-2|PINCH2 LIM zinc finger domain containing 2 protein-coding chr6-1051 chr6 113019226 113019470 + 15.4 0.000 Intergenic L1MC1|LINE|L1 414099 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA chr18-98 chr18 3013387 3013631 + 15.4 0.000 Intergenic Intergenic -1562 NM_014646 9663 Hs.132342 NM_014646 ENSG00000101577 LPIN2 - lipin 2 protein-coding chr6-932 chr6 26234814 26235058 + 15.4 0.000 promoter-TSS (NM_005320) promoter-TSS (NM_005320) 52 NM_005320 3007 Hs.136857 NM_005320 ENSG00000124575 HIST1H1D H1.3|H1D|H1F3|H1s-2 histone cluster 1 H1 family member d protein-coding chr17-1453 chr17 81387826 81388070 + 15.4 0.000 Intergenic Intergenic -2566 NM_001272086 100130370 Hs.646594 NM_001272086 LOC100130370 - uncharacterized LOC100130370 protein-coding chr9-802 chr9 122567888 122568132 + 15.4 0.000 exon (NM_001004454, exon 1 of 1) exon (NM_001004454, exon 1 of 1) 467 NM_001004454 138881 Hs.632695 NM_001004454 ENSG00000171496 OR1L8 OR9-24 olfactory receptor family 1 subfamily L member 8 protein-coding chr21-242 chr21 41124733 41124977 + 15.4 0.000 Intergenic Intergenic 23209 NR_024100 284835 Hs.106234 NR_024100 ENSG00000226496 LINC00323 C21orf130|NCRNA00323|PRED42 long intergenic non-protein coding RNA 323 ncRNA chr9-1062 chr9 18437942 18438186 + 15.4 0.000 Intergenic Intergenic -36089 NM_052866 92949 Hs.741483 NM_052866 ENSG00000178031 ADAMTSL1 ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN ADAMTS like 1 protein-coding chr17-1369 chr17 61493209 61493453 + 15.4 0.000 Intergenic Intergenic 36843 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding chr22-464 chr22 50190307 50190551 + 15.4 0.000 promoter-TSS (NM_001320488) promoter-TSS (NM_001320488) -158 NM_001320488 80305 Hs.517731 NM_025204 ENSG00000170638 TRABD LP6054|PP2447 TraB domain containing protein-coding chr13-493 chr13 76307339 76307583 + 15.4 0.000 Intergenic Intergenic -372329 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr8-959 chr8 127800860 127801104 + 15.4 0.000 intron (NR_003367, intron 1 of 8) L2a|LINE|L2 5020 NR_031609 100302185 NR_031609 ENSG00000283710 MIR1204 hsa-mir-1204 microRNA 1204 ncRNA chr11-1590 chr11 73931558 73931802 + 15.4 0.000 TTS (NM_025155) TTS (NM_025155) -18639 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr5-832 chr5 169344586 169344830 + 15.4 0.000 Intergenic Intergenic -43569 NM_001271946 6586 Hs.552087 NM_003062 ENSG00000184347 SLIT3 MEGF5|SLIL2|SLIT1|Slit-3|slit2 slit guidance ligand 3 protein-coding chr19-1486 chr19 6167518 6167762 + 15.4 0.000 intron (NM_030924, intron 7 of 14) intron (NM_030924, intron 7 of 14) 31973 NM_001289179 81616 Hs.465720 NM_030924 ENSG00000130377 ACSBG2 BGR|BRGL|PRTD-NY3|PRTDNY3 acyl-CoA synthetase bubblegum family member 2 protein-coding chr2-1914 chr2 211829058 211829302 + 15.4 0.000 intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 597180 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA chr1-1038 chr1 63773886 63774130 + 15.4 0.000 promoter-TSS (NM_001083592) promoter-TSS (NM_001083592) -9 NM_005012 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding chr6-1090 chr6 150498867 150499111 + 15.4 0.000 Intergenic Intergenic -100896 NR_138139 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding chr7-1360 chr7 101117490 101117734 + 15.4 0.000 Intergenic Intergenic -9477 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr11-717 chr11 34051637 34051881 + 15.4 0.000 promoter-TSS (NM_203364) promoter-TSS (NM_203364) 28 NM_005898 4076 Hs.471818 NM_005898 ENSG00000135387 CAPRIN1 GPIAP1|GPIP137|GRIP137|M11S1|RNG105|p137GPI cell cycle associated protein 1 protein-coding chr10-734 chr10 69349393 69349637 + 15.4 0.000 intron (NM_033496, intron 2 of 17) intron (NM_033496, intron 2 of 17) 30668 NM_000188 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding chr15-729 chr15 84797367 84797611 + 15.4 0.000 intron (NM_014630, intron 5 of 10) intron (NM_014630, intron 5 of 10) -19191 NM_020778 57538 Hs.459183 NM_020778 ENSG00000136383 ALPK3 CMH27|MAK|MIDORI alpha kinase 3 protein-coding chrX-505 chrX 100928773 100929017 + 15.4 0.000 promoter-TSS (NM_212559) promoter-TSS (NM_212559) 22 NM_212559 402415 Hs.364911 NM_212559 ENSG00000182489 XKRX XKR2|XPLAC|XRG2 XK related X-linked protein-coding chr15-561 chr15 50907846 50908090 + 15.4 0.000 promoter-TSS (NM_007347) promoter-TSS (NM_007347) -715 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding chr1-2392 chr1 54790628 54790872 + 15.4 0.000 intron (NM_001114108, intron 1 of 6) intron (NM_001114108, intron 1 of 6) 10573 NM_001114108 55001 Hs.16230 NM_017904 ENSG00000006555 TTC22 - tetratricopeptide repeat domain 22 protein-coding chr6-665 chr6 20877568 20877812 + 15.4 0.000 intron (NM_017774, intron 9 of 15) intron (NM_017774, intron 9 of 15) 343233 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding chr1-1524 chr1 76868259 76868503 + 15.4 0.000 intron (NM_001320274, intron 1 of 2) CpG 901 NM_001320273 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding chr14-523 chr14 48149975 48150219 + 15.4 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -355083 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr14-477 chr14 63852809 63853053 + 15.4 0.000 promoter-TSS (NM_182914) promoter-TSS (NM_182914) -34 NM_182914 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr18-255 chr18 70046360 70046604 + 15.4 0.000 intron (NM_001318520, intron 39 of 47) intron (NM_001318520, intron 39 of 47) -89683 NM_006566 10666 Hs.660130 NM_006566 ENSG00000150637 CD226 DNAM-1|DNAM1|PTA1|TLiSA1 CD226 molecule protein-coding chr3-1511 chr3 197022392 197022636 + 15.4 0.000 intron (NM_005929, intron 5 of 15) intron (NM_005929, intron 5 of 15) 7303 NM_005929 4241 Hs.184727 NM_005929 ENSG00000163975 MELTF CD228|MAP97|MFI2|MTF1|MTf melanotransferrin protein-coding chr4-990 chr4 66210879 66211123 + 15.4 0.000 Intergenic AluSx1|SINE|Alu -65823 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA chr3-727 chr3 49802940 49803184 + 15.4 0.000 promoter-TSS (NM_001366281) promoter-TSS (NM_001366281) -199 NM_203370 389119 Hs.86674 NM_203370 ENSG00000185614 INKA1 C3orf54|FAM212A inka box actin regulator 1 protein-coding chr10-1294 chr10 118962971 118963215 + 15.4 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -66621 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding chr4-729 chr4 102598226 102598470 + 15.4 0.000 intron (NM_003998, intron 15 of 23) intron (NM_003998, intron 15 of 23) -95862 NR_136202 105377621 Hs.15833 NR_136202 LOC105377621 - uncharacterized LOC105377621 ncRNA chr7-641 chr7 77538341 77538585 + 15.4 0.000 intron (NM_001131009, intron 1 of 16) intron (NM_001131009, intron 1 of 16) 420 NM_001131009 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding chr17-977 chr17 43803927 43804171 + 15.4 0.000 intron (NM_001932, intron 19 of 19) intron (NM_001932, intron 19 of 19) 23614 NM_001353400 284067 Hs.252707 NM_001136483 ENSG00000231256 CFAP97D1 C17orf105 CFAP97 domain containing 1 protein-coding chr10-776 chr10 1528302 1528546 + 15.4 0.000 intron (NR_033387, intron 1 of 1) intron (NR_033387, intron 1 of 1) 1794 NR_033387 642394 Hs.568831 NM_001098830 ENSG00000205696 ADARB2-AS1 C10orf109|NCRNA00168 ADARB2 antisense RNA 1 ncRNA chr8-520 chr8 119416798 119417042 + 15.4 0.000 exon (NM_002514, exon 2 of 5) exon (NM_002514, exon 2 of 5) 474 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding chr2-1748 chr2 85183559 85183803 + 15.4 0.000 intron (NM_031283, intron 3 of 11) intron (NM_031283, intron 3 of 11) -2728 NR_046797 100874334 Hs.693125 NR_046797 ENSG00000231134 TCF7L1-IT1 - TCF7L1 intronic transcript 1 ncRNA chr13-350 chr13 90690753 90690997 + 15.4 0.000 Intergenic Intergenic 197587 NR_120414 101927224 Hs.385801 NR_120414 LINC01049 - long intergenic non-protein coding RNA 1049 ncRNA chr4-761 chr4 153466363 153466607 + 15.4 0.000 exon (NM_015196, exon 1 of 35) exon (NM_015196, exon 1 of 35) 125 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chrX-291 chrX 40358983 40359227 + 15.4 0.000 Intergenic Intergenic 96188 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA chr14-819 chr14 105119654 105119898 + 15.4 0.000 Intergenic Intergenic 25629 NR_110546 102723354 Hs.569410 NR_110546 LINC02298 - long intergenic non-protein coding RNA 2298 ncRNA chr19-1549 chr19 18414795 18415039 + 15.4 0.000 Intergenic Intergenic -4481 NM_001009998 170463 Hs.515259 NM_032627 ENSG00000130511 SSBP4 - single stranded DNA binding protein 4 protein-coding chr22-667 chr22 36259518 36259762 + 15.4 0.000 intron (NM_145343, intron 5 of 6) intron (NM_145343, intron 5 of 6) 6507 NM_003661 8542 Hs.114309 NM_003661 ENSG00000100342 APOL1 APO-L|APOL|APOL-I|FSGS4 apolipoprotein L1 protein-coding chr5-1093 chr5 123916823 123917067 + 15.4 0.000 Intergenic Intergenic 371528 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding chr4-714 chr4 88107535 88107779 + 15.4 0.000 intron (NM_001257386, intron 9 of 15) intron (NM_001257386, intron 9 of 15) 50982 NM_004827 9429 Hs.480218 NM_004827 ENSG00000118777 ABCG2 ABC15|ABCP|BCRP|BCRP1|BMDP|CD338|CDw338|EST157481|GOUT1|MRX|MXR|MXR-1|MXR1|UAQTL1 ATP binding cassette subfamily G member 2 (Junior blood group) protein-coding chr17-1410 chr17 76153544 76153788 + 15.4 0.000 non-coding (NR_040017, exon 7 of 8) non-coding (NR_040017, exon 7 of 8) -12421 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr19-1092 chr19 35553500 35553744 + 15.4 0.000 intron (NM_000704, intron 17 of 21) intron (NM_000704, intron 17 of 21) -7593 NR_038396 100506469 Hs.661816 NR_038396 ENSG00000236144 TMEM147-AS1 - TMEM147 antisense RNA 1 ncRNA chr1-843 chr1 55215249 55215493 + 15.4 0.000 promoter-TSS (NR_038320) promoter-TSS (NR_038320) -7 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding chr12-506 chr12 6943457 6943701 + 15.4 0.000 promoter-TSS (NR_023317) promoter-TSS (NR_023317) 77 NM_001301834 113246 Hs.405913 NM_138425 ENSG00000111678 C12orf57 C10|GRCC10 chromosome 12 open reading frame 57 protein-coding chr10-1281 chr10 112061679 112061923 + 15.4 0.000 Intergenic Intergenic 121964 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding chr19-1523 chr19 12997016 12997260 + 15.4 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) 1663 NM_002501 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr10-1150 chr10 47552809 47553053 + 15.4 0.000 intron (NR_160414, intron 1 of 15) intron (NR_160414, intron 1 of 15) 569 NR_160415 113939912 Hs.463017 NR_160414 BMS1P2-AGAP9 - BMS1P2-AGAP9 readthrough pseudo chr7-126 chr7 151855372 151855616 + 15.4 0.000 intron (NM_016203, intron 1 of 15) intron (NM_016203, intron 1 of 15) -21548 NR_038926 100505483 Hs.649054 NR_038926 PRKAG2-AS1 - PRKAG2 antisense RNA 1 ncRNA chr16-727 chr16 56988598 56988842 + 15.4 0.000 promoter-TSS (NM_001330552) promoter-TSS (NM_001330552) -837 NM_001330552 84166 Hs.528836 NM_032206 ENSG00000140853 NLRC5 CLR16.1|NOD27|NOD4 NLR family CARD domain containing 5 protein-coding chr6-968 chr6 41027880 41028124 + 15.4 0.000 3' UTR (NM_173561, exon 9 of 9) 3' UTR (NM_173561, exon 9 of 9) -4722 NR_110873 101929555 Hs.552555 NR_110873 LOC101929555 - uncharacterized LOC101929555 ncRNA chr20-302 chr20 50191055 50191299 + 15.4 0.000 exon (NM_005194, exon 1 of 1) exon (NM_005194, exon 1 of 1) 347 NM_005194 1051 Hs.517106 NM_005194 ENSG00000172216 CEBPB C/EBP-beta|IL6DBP|NF-IL6|TCF5 CCAAT enhancer binding protein beta protein-coding chr14-656 chr14 90104627 90104871 + 15.4 0.000 intron (NM_022054, intron 1 of 1) intron (NM_022054, intron 1 of 1) 42755 NM_022054 56659 Hs.510191 NM_022054 ENSG00000152315 KCNK13 K2p13.1|THIK-1|THIK1 potassium two pore domain channel subfamily K member 13 protein-coding chr9-437 chr9 120842722 120842966 + 15.4 0.000 promoter-TSS (NM_005047) promoter-TSS (NM_005047) 78 NM_001270427 5711 Hs.193725 NM_005047 ENSG00000095261 PSMD5 S5B proteasome 26S subunit, non-ATPase 5 protein-coding chr1-2276 chr1 20482432 20482676 + 15.4 0.000 3' UTR (NM_018584, exon 2 of 2) 3' UTR (NM_018584, exon 2 of 2) 3656 NM_018584 55450 Hs.731383 NM_018584 ENSG00000162545 CAMK2N1 PRO1489 calcium/calmodulin dependent protein kinase II inhibitor 1 protein-coding chr10-1165 chr10 63267824 63268068 + 15.4 0.000 intron (NM_001322258, intron 2 of 24) intron (NM_001322258, intron 2 of 24) 1277 NM_001282948 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding chr17-1462 chr17 81905688 81905932 + 15.4 0.000 intron (NM_002861, intron 9 of 12) intron (NM_002861, intron 9 of 12) 3572 NM_148896 256933 Hs.569843 NM_148896 ENSG00000183979 NPB L7|PPL7|PPNPB neuropeptide B protein-coding chr11-422 chr11 46347162 46347406 + 15.4 0.000 promoter-TSS (NM_003646) promoter-TSS (NM_003646) -179 NM_001199267 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr12-1107 chr12 50302744 50302988 + 15.4 0.000 Intergenic Intergenic -19346 NM_016357 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding chrX-493 chrX 74015436 74015680 + 15.4 0.000 intron (NR_024582, intron 3 of 4) L1MA5|LINE|L1 71234 NR_024582 554203 Hs.648316 NR_024582 ENSG00000225470 JPX DCBALD06|ENOX|LINC00183|NCRNA00183 JPX transcript, XIST activator ncRNA chr19-1594 chr19 37719774 37720018 + 15.4 0.000 promoter-TSS (NM_032689) promoter-TSS (NM_032689) -135 NM_032689 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding chr3-900 chr3 188241216 188241460 + 15.4 0.000 intron (NM_005578, intron 2 of 10) intron (NM_005578, intron 2 of 10) 15933 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding chr1-2291 chr1 22420568 22420812 + 15.4 0.000 Intergenic Intergenic -31161 NM_014870 9923 Hs.418966 NM_014870 ENSG00000184677 ZBTB40 ZNF923 zinc finger and BTB domain containing 40 protein-coding chr22-651 chr22 31104935 31105179 + 15.4 0.000 TTS (NM_006932) TTS (NM_006932) 2511 NM_080430 140606 Hs.55940 NM_080430 ENSG00000198832 SELENOM SELM|SEPM selenoprotein M protein-coding chr15-648 chr15 52261838 52262082 + 15.4 0.000 intron (NM_018728, intron 9 of 40) intron (NM_018728, intron 9 of 40) 15240 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr19-1539 chr19 16585823 16586067 + 15.4 0.000 intron (NM_004831, intron 1 of 2) intron (NM_004831, intron 1 of 2) -13530 NM_024881 79939 Hs.620596 NM_024881 ENSG00000127526 SLC35E1 - solute carrier family 35 member E1 protein-coding chr8-329 chr8 17661526 17661770 + 15.4 0.000 intron (NR_156437, intron 7 of 13) intron (NR_156437, intron 7 of 13) 14853 NM_001330470 57509 Hs.7946 NM_020749 ENSG00000129422 MTUS1 ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 microtubule associated scaffold protein 1 protein-coding KI270718.1-1 KI270718.1 37648 37892 + 15.4 0.000 NA NA NA NA chr22-672 chr22 36470261 36470505 + 15.4 0.000 intron (NM_012473, intron 3 of 3) intron (NM_012473, intron 3 of 3) 11257 NM_012473 25828 Hs.211929 NM_012473 ENSG00000100348 TXN2 COXPD29|MT-TRX|MTRX|TRX2|TXN thioredoxin 2 protein-coding chr12-1036 chr12 3342217 3342461 + 15.4 0.000 intron (NR_148995, intron 1 of 11) intron (NR_148995, intron 1 of 11) 23783 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr16-1194 chr16 84345092 84345336 + 15.4 0.000 Intergenic MIRb|SINE|MIR -23309 NM_001286527 9914 Hs.6168 NM_014861 ENSG00000064270 ATP2C2 SPCA2 ATPase secretory pathway Ca2+ transporting 2 protein-coding chr12-1156 chr12 68240962 68241206 + 15.4 0.000 Intergenic L2a|LINE|L2 12520 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr14-306 chr14 104860584 104860828 + 15.4 0.000 Intergenic Intergenic -4562 NM_015005 283638 Hs.533721 NM_015005 ENSG00000099814 CEP170B CEP170R|FAM68C|KIAA0284 centrosomal protein 170B protein-coding chr2-1759 chr2 94212440 94212684 + 15.4 0.000 Intergenic (TGGCCC)n|Simple_repeat|Simple_repeat -4143 NR_146110 728034 NR_146105 BMS1P14 - BMS1 pseudogene 14 pseudo chr8-945 chr8 120000066 120000310 + 15.4 0.000 intron (NM_022783, intron 4 of 8) L1MB8|LINE|L1 -124914 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chr1-1549 chr1 151059272 151059516 + 15.4 0.000 promoter-TSS (NM_006818) promoter-TSS (NM_006818) 228 NM_020239 56882 Hs.22065 NM_020239 ENSG00000197622 CDC42SE1 SCIP1|SPEC1 CDC42 small effector 1 protein-coding chr15-294 chr15 66747983 66748227 + 15.4 0.000 intron (NR_027654, intron 4 of 4) intron (NR_027654, intron 4 of 4) 45869 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr3-1495 chr3 189270314 189270558 + 15.4 0.000 intron (NM_198485, intron 4 of 5) intron (NM_198485, intron 4 of 5) -29842 NR_046722 100874027 Hs.616080 NR_046722 ENSG00000230115 TPRG1-AS2 - TPRG1 antisense RNA 2 ncRNA chr3-1075 chr3 187955300 187955544 + 15.4 0.000 Intergenic Intergenic 20985 NR_135537 105374266 Hs.570518 NR_135537 LINC01991 - long intergenic non-protein coding RNA 1991 ncRNA chr8-990 chr8 142985642 142985886 + 15.4 0.000 intron (NR_026913, intron 1 of 1) intron (NR_026913, intron 1 of 1) -10064 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo chr3-1241 chr3 30625710 30625954 + 15.4 0.000 intron (NM_001024847, intron 2 of 7) intron (NM_001024847, intron 2 of 7) 19231 NM_003242 7048 Hs.82028 NM_003242 ENSG00000163513 TGFBR2 AAT3|FAA3|LDS1B|LDS2|LDS2B|MFS2|RIIC|TAAD2|TBR-ii|TBRII|TGFR-2|TGFbeta-RII transforming growth factor beta receptor 2 protein-coding chr16-716 chr16 25066982 25067226 + 15.4 0.000 non-coding (NR_135196, exon 1 of 2) non-coding (NR_135196, exon 1 of 2) 217 NR_135196 283887 Hs.652665 NR_135196 ENSG00000262155 LINC02175 - long intergenic non-protein coding RNA 2175 ncRNA chr5-749 chr5 59893941 59894185 + 15.4 0.000 promoter-TSS (NM_001104631) promoter-TSS (NM_001104631) -337 NM_001104631 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr2-1638 chr2 25312272 25312516 + 15.4 0.000 intron (NR_135490, intron 2 of 23) intron (NR_135490, intron 2 of 23) 16327 NR_031570 100302246 NR_031570 ENSG00000221445 MIR1301 MIRN1301|hsa-mir-1301|mir-1301 microRNA 1301 ncRNA chr1-1982 chr1 7847688 7847932 + 15.4 0.000 exon (NM_006786, exon 4 of 4) exon (NM_006786, exon 4 of 4) 5255 NM_006786 10911 Hs.715862 NM_006786 ENSG00000049247 UTS2 PRO1068|U-II|UCN2|UII urotensin 2 protein-coding chr9-1302 chr9 117808187 117808431 + 15.4 0.000 Intergenic Intergenic 103906 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr9-1372 chr9 133715870 133716114 + 15.4 0.000 intron (NM_001134707, intron 8 of 20) intron (NM_001134707, intron 8 of 20) 22360 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr7-1222 chr7 11518020 11518264 + 15.4 0.000 intron (NM_015204, intron 6 of 26) intron (NM_015204, intron 6 of 26) 314056 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr1-1276 chr1 13544654 13544898 + 15.4 0.000 Intergenic Intergenic -30773 NM_001010847 126755 Hs.657356 NM_001010847 ENSG00000162494 LRRC38 - leucine rich repeat containing 38 protein-coding chr11-1432 chr11 18618615 18618859 + 15.4 0.000 intron (NM_194285, intron 1 of 5) intron (NM_194285, intron 1 of 5) 15605 NM_194285 144108 Hs.738650 NM_194285 ENSG00000179119 SPTY2D1 Spt2 SPT2 chromatin protein domain containing 1 protein-coding chr19-1566 chr19 29664187 29664431 + 15.4 0.000 Intergenic Intergenic -1152 NM_024310 79156 Hs.466383 NM_024310 ENSG00000166289 PLEKHF1 APPD|LAPF|PHAFIN1|ZFYVE15 pleckstrin homology and FYVE domain containing 1 protein-coding chr18-225 chr18 23053870 23054114 + 15.4 0.000 Intergenic LTR50|LTR|ERVL -80572 NR_023359 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr12-1037 chr12 3973708 3973952 + 15.4 0.000 Intergenic Intergenic -100382 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding chr1-950 chr1 154405341 154405585 + 15.4 0.000 5' UTR (NM_181359, exon 1 of 9) 5' UTR (NM_181359, exon 1 of 9) 120 NM_181359 3570 Hs.135087 NM_000565 ENSG00000160712 IL6R CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80 interleukin 6 receptor protein-coding chr7-413 chr7 5304113 5304357 + 15.4 0.000 3' UTR (NM_001300847, exon 11 of 11) 3' UTR (NM_001300847, exon 11 of 11) 21292 NM_001300847 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr11-858 chr11 9759525 9759769 + 15.4 0.000 promoter-TSS (NR_033972) promoter-TSS (NR_033972) -114 NR_033972 440028 Hs.677541 NR_033972 ENSG00000245522 LINC02709 - long intergenic non-protein coding RNA 2709 ncRNA chrX-534 chrX 121308605 121308849 + 15.4 0.000 Intergenic Intergenic -62245 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA chr9-518 chr9 78297553 78297797 + 15.4 0.000 intron (NM_021154, intron 1 of 7) CpG 550 NM_058179 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding chr11-1339 chr11 86116227 86116471 + 15.4 0.000 Intergenic Intergenic -46489 NM_001206947 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding chr5-991 chr5 15971849 15972093 + 15.4 0.000 Intergenic Intergenic 36789 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA chr8-977 chr8 139420154 139420398 + 15.4 0.000 Intergenic ERVL-E-int|LTR|ERVL 282847 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding chr1-2113 chr1 207797358 207797602 + 15.4 0.000 Intergenic Intergenic 4459 NR_029832 407026 NR_029832 ENSG00000284214 MIR29C MIRN29C|miRNA29C|mir-29c microRNA 29c ncRNA chr6-73 chr6 149749529 149749773 + 15.4 0.000 promoter-TSS (NM_005389) promoter-TSS (NM_005389) -44 NM_001252049 5110 Hs.279257 NM_005389 ENSG00000120265 PCMT1 PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase protein-coding chr9-725 chr9 133707206 133707450 + 15.4 0.000 intron (NM_001134707, intron 11 of 20) intron (NM_001134707, intron 11 of 20) 31024 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr15-733 chr15 87572497 87572741 + 15.4 0.000 Intergenic MER5A|DNA|hAT-Charlie -4310 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr19-243 chr19 45376784 45377028 + 15.4 0.000 Intergenic AluSx3|SINE|Alu -6319 NM_001130867 2068 Hs.487294 NM_000400 ENSG00000104884 ERCC2 COFS2|EM9|TFIIH|TTD|TTD1|XPD ERCC excision repair 2, TFIIH core complex helicase subunit protein-coding chr2-1174 chr2 240452315 240452559 + 15.4 0.000 intron (NR_161169, intron 1 of 2) intron (NR_161169, intron 1 of 2) -3564 NR_029702 406941 NR_029702 ENSG00000207611 MIR149 MIRN149|mir-149 microRNA 149 ncRNA chr14-627 chr14 56172665 56172909 + 15.4 0.000 intron (NM_021255, intron 1 of 5) intron (NM_021255, intron 1 of 5) 54376 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding chr1-2189 chr1 3230758 3231002 + 15.4 0.000 intron (NM_022114, intron 2 of 16) intron (NM_022114, intron 2 of 16) 102905 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr6-121 chr6 148746917 148747161 + 15.4 0.000 promoter-TSS (NM_005715) promoter-TSS (NM_005715) 9 NM_005715 10090 Hs.657370 NM_005715 ENSG00000111962 UST 2OST uronyl 2-sulfotransferase protein-coding chr11-729 chr11 61745974 61746218 + 15.4 0.000 3' UTR (NM_006133, exon 20 of 20) 3' UTR (NM_006133, exon 20 of 20) -6540 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr5-192 chr5 134367091 134367335 + 15.4 0.000 promoter-TSS (NM_016508) promoter-TSS (NM_016508) -42 NM_001113575 51265 Hs.719926 NM_016508 ENSG00000006837 CDKL3 NKIAMRE cyclin dependent kinase like 3 protein-coding chr1-2249 chr1 15815493 15815737 + 15.4 0.000 Intergenic Intergenic -7916 NM_001089591 440567 Hs.568229 NM_001089591 ENSG00000233954 UQCRHL - ubiquinol-cytochrome c reductase hinge protein like protein-coding chr10-917 chr10 113432030 113432274 + 15.4 0.000 Intergenic Intergenic -118679 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding chr21-236 chr21 36535949 36536193 + 15.4 0.000 intron (NM_001146077, intron 1 of 2) intron (NM_001146077, intron 1 of 2) 6713 NM_001146078 23562 Hs.660278 NM_012130 ENSG00000159261 CLDN14 DFNB29 claudin 14 protein-coding chr17-1363 chr17 60506330 60506574 + 15.4 0.000 intron (NM_006380, intron 1 of 12) L2b|LINE|L2 19788 NM_001282476 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding chr7-881 chr7 1325492 1325736 + 15.4 0.000 Intergenic Intergenic 92742 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr5-959 chr5 177447802 177448046 + 15.4 0.000 promoter-TSS (NM_001174102) promoter-TSS (NM_001174102) 20 NR_038915 340037 Hs.570879 NR_038915 PRR7-AS1 - PRR7 antisense RNA 1 ncRNA chr14-175 chr14 74921649 74921893 + 15.4 0.000 intron (NM_001370257, intron 1 of 7) AluSz|SINE|Alu 671 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding chr6-542 chr6 116279802 116280046 + 15.3 0.000 promoter-TSS (NR_136521) promoter-TSS (NR_136521) -162 NM_001080976 29940 Hs.458358 NM_013352 ENSG00000111817 DSE DS-epi1|DSEP|DSEPI|EDSMC2|SART-2|SART2 dermatan sulfate epimerase protein-coding chr1-2609 chr1 202599970 202600214 + 15.3 0.000 intron (NM_001136504, intron 7 of 8) intron (NM_001136504, intron 7 of 8) 43361 NM_001136504 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding chr16-735 chr16 71845694 71845938 + 15.3 0.000 promoter-TSS (NM_001137675) promoter-TSS (NM_001137675) -160 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1 like protein-coding chr2-1452 chr2 29015147 29015391 + 15.3 0.000 intron (NM_001321539, intron 8 of 15) intron (NM_001321539, intron 8 of 15) 33971 NM_001321539 165186 Hs.525977 NM_199280 ENSG00000189350 TOGARAM2 FAM179A TOG array regulator of axonemal microtubules 2 protein-coding chr16-757 chr16 88550511 88550755 + 15.3 0.000 Intergenic Intergenic 11350 NR_146877 400555 Hs.120392 NM_001001682 ZC3H18-AS1 C16orf85|LINC00859 ZC3H18 antisense RNA 1 (head to head) ncRNA chr17-1263 chr17 18992116 18992360 + 15.3 0.000 intron (NM_001039999, intron 2 of 5) intron (NM_001039999, intron 2 of 5) 12526 NM_001039999 644815 Hs.710727 NM_001039999 ENSG00000188522 FAM83G PAWS1 family with sequence similarity 83 member G protein-coding chr7-1189 chr7 2000332 2000576 + 15.3 0.000 intron (NM_001013837, intron 14 of 18) intron (NM_001013837, intron 14 of 18) -59883 NM_001304525 8379 Hs.654838 NM_003550 ENSG00000002822 MAD1L1 MAD1|PIG9|TP53I9|TXBP181 mitotic arrest deficient 1 like 1 protein-coding chr7-976 chr7 76373282 76373526 + 15.3 0.000 Intergenic Intergenic -14413 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chrX-129 chrX 101097984 101098228 + 15.3 0.000 promoter-TSS (NM_001318521) promoter-TSS (NM_001318521) -76 NM_001318521 2491 Hs.348920 NM_006733 ENSG00000102384 CENPI CENP-I|FSHPRH1|LRPR1 centromere protein I protein-coding chr5-548 chr5 139278216 139278460 + 15.3 0.000 promoter-TSS (NR_002915) promoter-TSS (NR_002915) -442 NR_002915 26821 Hs.684893 NR_002915 ENSG00000200959 SNORA74A RNU19|U19 small nucleolar RNA, H/ACA box 74A snoRNA chr12-846 chr12 57470985 57471229 + 15.3 0.000 exon (NM_001167609, exon 11 of 11) exon (NM_001167609, exon 11 of 11) 6760 NM_001367422 64333 Hs.437126 NM_032496 ENSG00000123329 ARHGAP9 10C|RGL1 Rho GTPase activating protein 9 protein-coding chr7-1361 chr7 101129110 101129354 + 15.3 0.000 intron (NM_000602, intron 2 of 8) AluYm1|SINE|Alu 2143 NM_000602 5054 Hs.414795 NM_000602 ENSG00000106366 SERPINE1 PAI|PAI-1|PAI1|PLANH1 serpin family E member 1 protein-coding chr11-899 chr11 63922733 63922977 + 15.3 0.000 Intergenic Intergenic -5691 NM_001363648 283248 Hs.98788 NM_173587 ENSG00000167771 RCOR2 - REST corepressor 2 protein-coding chr5-999 chr5 28612550 28612794 + 15.3 0.000 Intergenic L1PA17|LINE|L1 -314198 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo chr19-820 chr19 41357765 41358009 + 15.3 0.000 intron (NM_030578, intron 3 of 3) intron (NM_030578, intron 3 of 3) -3965 NM_000660 7040 Hs.645227 NM_000660 ENSG00000105329 TGFB1 CED|DPD1|IBDIMDE|LAP|TGFB|TGFbeta transforming growth factor beta 1 protein-coding chr3-1327 chr3 63872303 63872547 + 15.3 0.000 intron (NM_000333, intron 1 of 12) intron (NM_000333, intron 1 of 12) 7868 NM_000333 6314 Hs.476595 NM_000333 ENSG00000163635 ATXN7 ADCAII|OPCA3|SCA7|SGF73 ataxin 7 protein-coding chr9-492 chr9 130756287 130756531 + 15.3 0.000 intron (NM_007313, intron 1 of 10) intron (NM_007313, intron 1 of 10) 42528 NM_007313 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr17-1356 chr17 59093923 59094167 + 15.3 0.000 intron (NM_001320987, intron 1 of 22) AluSz6|SINE|Alu 12835 NR_148347 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding chr16-912 chr16 1144137 1144381 + 15.3 0.000 Intergenic Intergenic -8847 NM_021098 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr20-308 chr20 63848096 63848340 + 15.3 0.000 Intergenic Intergenic -12995 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr11-521 chr11 72601148 72601392 + 15.3 0.000 intron (NM_001143839, intron 3 of 29) intron (NM_001143839, intron 3 of 29) 13860 NR_029603 406931 NR_029603 ENSG00000272036 MIR139 MIR139-3p|MIRN139|mir-139 microRNA 139 ncRNA chr8-579 chr8 123344143 123344387 + 15.3 0.000 intron (NM_014109, intron 19 of 27) L1ME4b|LINE|L1 -3769 NR_037516 100500863 NR_037516 ENSG00000207704 MIR548AA1 - microRNA 548aa-1 ncRNA chr2-575 chr2 237703891 237704135 + 15.3 0.000 intron (NM_001137551, intron 1 of 11) intron (NM_001137551, intron 1 of 11) 11808 NM_001137552 9208 Hs.471779 NM_004735 ENSG00000124831 LRRFIP1 FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP LRR binding FLII interacting protein 1 protein-coding chr1-1159 chr1 46174612 46174856 + 15.3 0.000 promoter-TSS (NM_005727) promoter-TSS (NM_005727) 167 NM_001328648 8503 Hs.655387 NM_003629 ENSG00000117461 PIK3R3 p55|p55-GAMMA|p55PIK phosphoinositide-3-kinase regulatory subunit 3 protein-coding chr20-593 chr20 36932947 36933191 + 15.3 0.000 intron (NM_015474, intron 4 of 15) L2c|LINE|L2 18639 NM_001363729 25939 Hs.580681 NM_015474 ENSG00000101347 SAMHD1 CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 protein-coding chr15-725 chr15 82951978 82952222 + 15.3 0.000 intron (NM_004839, intron 1 of 8) intron (NM_004839, intron 1 of 8) 620 NM_199330 9455 Hs.578443 NM_004839 ENSG00000103942 HOMER2 ACPD|CPD|DFNA68|HOMER-2|VESL-2 homer scaffold protein 2 protein-coding chr14-760 chr14 83788822 83789066 + 15.3 0.000 Intergenic Intergenic 1146312 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA chr20-201 chr20 34709613 34709857 + 15.3 0.000 intron (NM_021202, intron 4 of 4) CpG-17654 5016 NM_001329431 58476 Hs.516994 NM_021202 ENSG00000078804 TP53INP2 C20orf110|DOR|PIG-U|PIGU|PINH|dJ1181N3.1 tumor protein p53 inducible nuclear protein 2 protein-coding chr2-1426 chr2 241465368 241465612 + 15.3 0.000 exon (NM_001282983, exon 18 of 18) exon (NM_001282983, exon 18 of 18) -12415 NR_036083 100422942 NR_036083 ENSG00000263752 MIR3133 - microRNA 3133 ncRNA chr19-1608 chr19 41797301 41797545 + 15.3 0.000 intron (NM_001815, intron 1 of 6) L2a|LINE|L2 836 NM_001277163 1084 Hs.11 NM_001815 ENSG00000170956 CEACAM3 CD66D|CEA|CGM1|W264|W282 carcinoembryonic antigen related cell adhesion molecule 3 protein-coding chr16-1081 chr16 19718145 19718389 + 15.3 0.000 promoter-TSS (NM_001348535) promoter-TSS (NM_001348535) -40 NM_001348528 400506 Hs.585209 NM_001012991 ENSG00000103550 KNOP1 101F10.1|C16orf88|FAM191A|TSG118 lysine rich nucleolar protein 1 protein-coding chr9-1365 chr9 131402869 131403113 + 15.3 0.000 Intergenic Intergenic -27099 NM_013318 84726 Hs.743955 NM_013318 ENSG00000130723 PRRC2B BAT2L|BAT2L1|KIAA0515|LQFBS-1 proline rich coiled-coil 2B protein-coding chr9-956 chr9 123420395 123420639 + 15.3 0.000 intron (NM_001352968, intron 18 of 18) intron (NM_001352968, intron 18 of 18) -17914 NR_030332 693186 NR_030332 ENSG00000207991 MIR601 MIRN601|hsa-mir-601 microRNA 601 ncRNA chr10-835 chr10 58157391 58157635 + 15.3 0.000 Intergenic Intergenic 110381 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr15-186 chr15 75738422 75738666 + 15.3 0.000 non-coding (NR_024595, exon 3 of 5) non-coding (NR_024595, exon 3 of 5) 1533 NR_024595 100128285 Hs.604066 NR_024595 DNM1P35 DNM1DN8-2|DNM1DN8.2|DNM1DN8@|FKSG88 dynamin 1 pseudogene 35 pseudo chr17-894 chr17 79929643 79929887 + 15.3 0.000 Intergenic Intergenic -3040 NR_110850 101928766 Hs.630666 NR_110850 ENSG00000262585 LINC01979 - long intergenic non-protein coding RNA 1979 ncRNA chr17-961 chr17 35142079 35142323 + 15.3 0.000 promoter-TSS (NM_001014445) promoter-TSS (NM_001014445) 50 NM_001014445 54475 Hs.85570 NM_018096 ENSG00000073536 NLE1 NLE notchless homolog 1 protein-coding chr1-2208 chr1 7810447 7810691 + 15.3 0.000 exon (NM_001289864, exon 13 of 22) exon (NM_001289864, exon 13 of 22) 26140 NM_001289861 8863 Hs.162200 NM_016831 ENSG00000049246 PER3 FASPS3|GIG13 period circadian regulator 3 protein-coding chr19-1038 chr19 1354473 1354717 + 15.3 0.000 promoter-TSS (NM_001369791) promoter-TSS (NM_001369791) -364 NM_001369797 84939 Hs.515016 NM_032220 ENSG00000160953 PWWP3A EXPAND1|HSPC211|MUM-1|MUM1 PWWP domain containing 3A, DNA repair factor protein-coding chr12-991 chr12 104288797 104289041 + 15.3 0.000 intron (NM_001261445, intron 1 of 14) CpG 1887 NM_182742 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding chr11-1122 chr11 64082282 64082526 + 15.3 0.000 intron (NM_014067, intron 3 of 10) intron (NM_014067, intron 3 of 10) -21486 NM_013280 23769 Hs.584876 NM_013280 ENSG00000126500 FLRT1 SPG68 fibronectin leucine rich transmembrane protein 1 protein-coding chr14-460 chr14 105150184 105150428 + 15.3 0.000 TTS (NR_106823) TTS (NR_106823) 558 NR_106823 102465458 NR_106823 ENSG00000273778 MIR6765 hsa-mir-6765 microRNA 6765 ncRNA chr7-1311 chr7 69091577 69091821 + 15.3 0.000 Intergenic Intergenic 505925 NR_148926 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr8-966 chr8 130357393 130357637 + 15.3 0.000 intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) -60982 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA chr10-976 chr10 15829983 15830227 + 15.3 0.000 intron (NM_024948, intron 8 of 14) intron (NM_024948, intron 8 of 14) 30402 NM_024948 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding chr15-255 chr15 39598705 39598949 + 15.3 0.000 3' UTR (NM_003246, exon 22 of 22) 3' UTR (NM_003246, exon 22 of 22) 17748 NM_003246 7057 Hs.164226 NM_003246 ENSG00000137801 THBS1 THBS|THBS-1|TSP|TSP-1|TSP1 thrombospondin 1 protein-coding chr3-899 chr3 187737527 187737771 + 15.3 0.000 intron (NM_001706, intron 1 of 9) CpG -1148 NM_001130845 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr5-302 chr5 180594796 180595040 + 15.3 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -3419 NM_052863 92304 Hs.62492 NM_052863 ENSG00000161055 SCGB3A1 HIN-1|HIN1|LU105|PnSP-2|UGRP2 secretoglobin family 3A member 1 protein-coding chr10-1301 chr10 119769777 119770021 + 15.3 0.000 intron (NM_014937, intron 2 of 19) MLT2B2|LTR|ERVL 43849 NM_014937 22876 Hs.369755 NM_014937 ENSG00000198825 INPP5F MSTP007|MSTPO47|SAC2|hSAC2 inositol polyphosphate-5-phosphatase F protein-coding chr8-896 chr8 76535278 76535522 + 15.3 0.000 Intergenic Intergenic 128746 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA chr12-338 chr12 95073555 95073799 + 15.3 0.000 promoter-TSS (NM_003297) promoter-TSS (NM_003297) -59 NM_001127362 7181 Hs.108301 NM_003297 ENSG00000120798 NR2C1 TR2 nuclear receptor subfamily 2 group C member 1 protein-coding chr2-846 chr2 69643629 69643873 + 15.3 0.000 promoter-TSS (NM_014911) promoter-TSS (NM_014911) -12 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding chr7-1337 chr7 91019879 91020123 + 15.3 0.000 intron (NM_012395, intron 9 of 13) intron (NM_012395, intron 9 of 13) -244432 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding chr10-329 chr10 79293377 79293621 + 15.3 0.000 exon (NM_020338, exon 12 of 25) exon (NM_020338, exon 12 of 25) -53970 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding chr5-1061 chr5 77844312 77844556 + 15.3 0.000 Intergenic Intergenic -40222 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr2-1524 chr2 160062600 160062844 + 15.3 0.000 promoter-TSS (NM_001195641) promoter-TSS (NM_001195641) -107 NM_007366 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding chr3-1356 chr3 99789348 99789592 + 15.3 0.000 intron (NM_001850, intron 3 of 4) intron (NM_001850, intron 3 of 4) -28392 NM_032359 84319 Hs.581320 NM_032359 ENSG00000184220 CMSS1 C3orf26 cms1 ribosomal small subunit homolog protein-coding chr8-536 chr8 143400158 143400402 + 15.3 0.000 Intergenic Intergenic -17399 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr3-1022 chr3 133930325 133930569 + 15.3 0.000 promoter-TSS (NR_161373) promoter-TSS (NR_161373) -635 NR_161373 80111 Hs.287691 NM_025041 ENSG00000174640 C3orf36 - chromosome 3 open reading frame 36 ncRNA chr13-392 chr13 60583515 60583759 + 15.3 0.000 Intergenic MER74A|LTR|ERVL -89318 NR_047003 101926930 Hs.578045 NR_047003 LINC00378 - long intergenic non-protein coding RNA 378 ncRNA chr11-1394 chr11 1745126 1745370 + 15.3 0.000 intron (NM_001170820, intron 2 of 2) intron (NM_001170820, intron 2 of 2) 5347 NM_001170820 402778 Hs.121575 NM_001170820 ENSG00000244242 IFITM10 DSPA3 interferon induced transmembrane protein 10 protein-coding chr2-1275 chr2 85886799 85887043 + 15.3 0.000 intron (NM_001354229, intron 1 of 7) intron (NM_001354229, intron 1 of 7) 628 NM_001354238 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chr16-1060 chr16 6572525 6572769 + 15.3 0.000 intron (NM_018723, intron 2 of 15) AluSz|SINE|Alu -201162 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr15-169 chr15 99105703 99105947 + 15.3 0.000 exon (NM_015286, exon 1 of 5) exon (NM_015286, exon 1 of 5) 745 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding chr15-562 chr15 55630772 55631016 + 15.3 0.000 intron (NM_173814, intron 15 of 19) intron (NM_173814, intron 15 of 19) -41923 NM_015617 26108 Hs.87194 NM_015617 ENSG00000171016 PYGO1 - pygopus family PHD finger 1 protein-coding chr5-427 chr5 138458542 138458786 + 15.3 0.000 Intergenic Intergenic -6815 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr20-107 chr20 347019 347263 + 15.3 0.000 promoter-TSS (NM_001323679) promoter-TSS (NM_001323679) 30 NM_001323684 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr3-1175 chr3 161104863 161105107 + 15.3 0.000 promoter-TSS (NM_001349161) promoter-TSS (NM_001349161) -90 NM_033169 8706 Hs.418062 NM_003781 ENSG00000169255 B3GALNT1 B3GALT3|GLCT3|GLOB|Gb4Cer|P|P1|beta3Gal-T3|galT3 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) protein-coding chr10-704 chr10 132411427 132411671 + 15.3 0.000 intron (NM_138499, intron 2 of 2) intron (NM_138499, intron 2 of 2) 14349 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr10-994 chr10 58095508 58095752 + 15.3 0.000 Intergenic Intergenic 172264 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding chr8-430 chr8 144060519 144060763 + 15.3 0.000 promoter-TSS (NM_017570) promoter-TSS (NM_017570) 51 NM_017570 26873 Hs.305882 NM_017570 ENSG00000178814 OPLAH 5-Opase|OPLA|OPLAHD 5-oxoprolinase, ATP-hydrolysing protein-coding chr12-983 chr12 83811525 83811769 + 15.3 0.000 Intergenic Intergenic 1101152 NM_001146335 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding chr3-1485 chr3 184383150 184383394 + 15.3 0.000 intron (NM_001304472, intron 10 of 22) intron (NM_001304472, intron 10 of 22) 2962 NM_001304473 8646 Hs.166186 NM_003741 ENSG00000090539 CHRD - chordin protein-coding chr8-862 chr8 42265698 42265942 + 15.3 0.000 intron (NR_125823, intron 1 of 2) intron (NR_125823, intron 1 of 2) 5141 NR_125823 101929897 Hs.60288 NR_125823 ENSG00000253408 LOC101929897 - uncharacterized LOC101929897 ncRNA chr7-1093 chr7 43951249 43951493 + 15.3 0.000 intron (NM_015983, intron 6 of 6) intron (NM_015983, intron 6 of 6) 24935 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding chr11-1355 chr11 116835994 116836238 + 15.3 0.000 promoter-TSS (NR_126362) promoter-TSS (NR_126362) -1 NR_126362 104326055 Hs.627813 NR_126362 ENSG00000235910 APOA1-AS - APOA1 antisense RNA ncRNA chr9-1061 chr9 17761107 17761351 + 15.3 0.000 intron (NM_003026, intron 2 of 8) intron (NM_003026, intron 2 of 8) 182163 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr9-1067 chr9 34603188 34603432 + 15.3 0.000 Intergenic Intergenic 8787 NM_148178 138716 Hs.15961 NM_148178 ENSG00000164967 RPP25L C9orf23|bA296L22.5 ribonuclease P/MRP subunit p25 like protein-coding chr1-2662 chr1 228210728 228210972 + 15.3 0.000 intron (NR_073154, intron 2 of 3) intron (NR_073154, intron 2 of 3) 2720 NM_001271223 84033 Hs.650039 NM_052843 ENSG00000154358 OBSCN ARHGEF30|UNC89 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF protein-coding chr1-1854 chr1 160939331 160939575 + 15.3 0.000 intron (NR_110695, intron 3 of 5) L1P2|LINE|L1 6988 NR_110695 101928372 NR_110695 ENSG00000198358 LOC101928372 - uncharacterized LOC101928372 ncRNA chr2-1009 chr2 185810466 185810710 + 15.3 0.000 intron (NM_173651, intron 17 of 22) MSTA|LTR|ERVL-MaLR -10437 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA chr9-719 chr9 130947303 130947547 + 15.3 0.000 Intergenic Intergenic -8178 NM_032843 84929 Hs.133205 NM_032843 ENSG00000130720 FIBCD1 - fibrinogen C domain containing 1 protein-coding chr17-501 chr17 50542027 50542271 + 15.3 0.000 exon (NM_017957, exon 10 of 10) exon (NM_017957, exon 10 of 10) -3395 NR_135675 105371824 Hs.683630 NR_135675 ENSG00000250286 LOC105371824 - uncharacterized LOC105371824 ncRNA chrX-185 chrX 119852683 119852927 + 15.3 0.000 exon (NM_080632, exon 1 of 11) exon (NM_080632, exon 1 of 11) 223 NM_023010 65109 Hs.103832 NM_023010 ENSG00000125351 UPF3B HUPF3B|MRX62|MRXS14|RENT3B|UPF3BP1|UPF3BP2|UPF3BP3|UPF3X|Upf3p-X UPF3B regulator of nonsense mediated mRNA decay protein-coding chr4-961 chr4 41444817 41445061 + 15.3 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) 84132 NM_001112717 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr3-510 chr3 196543276 196543520 + 15.3 0.000 Intergenic SVA_D|Retroposon|SVA 25156 NM_001345918 348793 Hs.385865 NM_182627 ENSG00000185798 WDR53 - WD repeat domain 53 protein-coding chr2-1975 chr2 235958731 235958975 + 15.3 0.000 intron (NM_001037131, intron 12 of 17) intron (NM_001037131, intron 12 of 17) 209533 NM_001301687 2637 Hs.184945 NM_001485 ENSG00000168505 GBX2 - gastrulation brain homeobox 2 protein-coding chr17-1087 chr17 82664331 82664575 + 15.3 0.000 intron (NM_006822, intron 2 of 5) intron (NM_006822, intron 2 of 5) 3854 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr5-794 chr5 137296157 137296401 + 15.3 0.000 intron (NM_004598, intron 2 of 10) MIR|SINE|MIR 168082 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr1-1261 chr1 8197749 8197993 + 15.3 0.000 Intergenic Intergenic -10801 NR_125998 102724539 Hs.516816 NR_125998 ENSG00000227634 LINC01714 - long intergenic non-protein coding RNA 1714 ncRNA chr1-1718 chr1 32702587 32702831 + 15.3 0.000 promoter-TSS (NM_001161708) promoter-TSS (NM_001161708) 61 NM_030786 81493 Hs.712631 NM_030786 ENSG00000162520 SYNC SYNC1|SYNCOILIN syncoilin, intermediate filament protein protein-coding chr17-980 chr17 44115776 44116020 + 15.3 0.000 promoter-TSS (NR_136415) promoter-TSS (NR_136415) -14 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr11-1459 chr11 37504343 37504587 + 15.3 0.000 Intergenic Intergenic -434136 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA chr22-560 chr22 19749529 19749773 + 15.3 0.000 Intergenic Intergenic -7052 NM_005992 6899 Hs.173984 NM_005992 ENSG00000184058 TBX1 CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS T-box transcription factor 1 protein-coding chr16-592 chr16 70707429 70707673 + 15.3 0.000 intron (NM_001351157, intron 13 of 17) intron (NM_001351157, intron 13 of 17) -21498 NM_138383 92154 Hs.432387 NM_138383 ENSG00000132613 MTSS2 ABBA|ABBA-1|ABBA1|MTSS1L MTSS I-BAR domain containing 2 protein-coding chr6-785 chr6 23403497 23403741 + 15.3 0.000 Intergenic Intergenic -685695 NR_134614 105374972 Hs.484889 NR_134613 LOC105374972 - uncharacterized LOC105374972 ncRNA chr9-1347 chr9 129570135 129570379 + 15.3 0.000 Intergenic Intergenic -38627 NM_001286796 28989 Hs.744027 NM_014064 ENSG00000148335 NTMT1 AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A N-terminal Xaa-Pro-Lys N-methyltransferase 1 protein-coding chr1-2651 chr1 222044035 222044279 + 15.3 0.000 Intergenic Intergenic -65637 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr4-794 chr4 4860148 4860392 + 15.3 0.000 exon (NM_002448, exon 1 of 2) exon (NM_002448, exon 1 of 2) 605 NM_002448 4487 Hs.424414 NM_002448 ENSG00000163132 MSX1 ECTD3|HOX7|HYD1|STHAG1 msh homeobox 1 protein-coding chr11-1020 chr11 78256942 78257186 + 15.1 0.000 intron (NM_012296, intron 2 of 9) intron (NM_012296, intron 2 of 9) 68145 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding chr1-1634 chr1 3727046 3727290 + 15.1 0.000 exon (NM_001204184, exon 7 of 13) exon (NM_001204184, exon 7 of 13) 19603 NR_033712 57212 Hs.49658 NM_207306 ENSG00000227372 TP73-AS1 KIAA0495|PDAM TP73 antisense RNA 1 ncRNA chr19-662 chr19 3643867 3644111 + 15.1 0.000 intron (NM_001195733, intron 12 of 16) intron (NM_001195733, intron 12 of 16) -17174 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr7-689 chr7 4683772 4684016 + 15.1 0.000 intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 1599 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr7-964 chr7 67129294 67129538 + 15.1 0.000 intron (NR_134540, intron 12 of 14) L1MC1|LINE|L1 -15019 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr21-32 chr21 7258058 7258302 + 15.1 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -172457 NM_001322047 102724843 Hs.743984 NM_001322047 LOC102724843 - uncharacterized LOC102724843 protein-coding chr2-2000 chr2 241320765 241321009 + 15.1 0.000 intron (NM_001349291, intron 2 of 13) intron (NM_001349291, intron 2 of 13) 4722 NM_001321033 4735 Hs.721234 NM_004404 ENSG00000168385 SEPTIN2 DIFF6|NEDD-5|NEDD5|Pnutl3|SEPT2|hNedd5 septin 2 protein-coding chr1-1448 chr1 224635441 224635685 + 15.1 0.000 intron (NM_152495, intron 1 of 5) intron (NM_152495, intron 1 of 5) 19246 NM_152495 149111 Hs.731723 NM_152495 ENSG00000143786 CNIH3 CNIH-3 cornichon family AMPA receptor auxiliary protein 3 protein-coding chr8-550 chr8 23457383 23457627 + 15.1 0.000 intron (NM_004901, intron 1 of 12) CpG 142 NM_004901 9583 Hs.444389 NM_004901 ENSG00000197217 ENTPD4 LALP70|LAP70|LYSAL1|NTPDase-4|UDPase ectonucleoside triphosphate diphosphohydrolase 4 protein-coding chr1-2449 chr1 93881186 93881430 + 15.1 0.000 Intergenic Intergenic -2102 NM_014597 30836 Hs.85769 NM_014597 ENSG00000067334 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase terminal interacting protein 2 protein-coding chr10-812 chr10 31697853 31698097 + 15.1 0.000 Intergenic Intergenic 210951 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding chr1-2234 chr1 11416401 11416645 + 15.1 0.000 Intergenic LTR16|LTR|ERVL -62632 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding chr3-614 chr3 134426885 134427129 + 15.1 0.000 Intergenic Intergenic -10820 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA chr19-991 chr19 42407505 42407749 + 15.1 0.000 exon (NM_005357, exon 5 of 10) exon (NM_005357, exon 5 of 10) 10479 NR_073180 100996307 Hs.466840 NR_073179 ENSG00000213904 LIPE-AS1 - LIPE antisense RNA 1 ncRNA chr22-666 chr22 36223912 36224156 + 15.1 0.000 Intergenic ERVL-int|LTR|ERVL 15493 NM_030882 23780 Hs.474740 NM_030882 ENSG00000128335 APOL2 APOL-II|APOL3 apolipoprotein L2 protein-coding chr2-862 chr2 159712396 159712640 + 15.1 0.000 promoter-TSS (NM_022826) promoter-TSS (NM_022826) 12 NM_022826 64844 Hs.529272 NM_022826 ENSG00000136536 MARCH7 AXO|AXOT|MARCH-VII|RNF177 membrane associated ring-CH-type finger 7 protein-coding chr10-809 chr10 29807578 29807822 + 15.1 0.000 Intergenic Intergenic -70764 NM_001323599 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding chr17-1183 chr17 80087102 80087346 + 15.1 0.000 intron (NM_017950, intron 14 of 19) intron (NM_017950, intron 14 of 19) -11604 NR_039607 100616121 NR_039607 ENSG00000265561 MIR1268B - microRNA 1268b ncRNA chr2-1694 chr2 47249458 47249702 + 15.1 0.000 intron (NR_110207, intron 1 of 2) intron (NR_110207, intron 1 of 2) -72644 NM_001305625 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr5-937 chr5 146516048 146516292 + 15.1 0.000 promoter-TSS (NM_194251) promoter-TSS (NM_194251) -57 NM_194251 134391 Hs.483732 NM_194251 ENSG00000173250 GPR151 GALR4|GALRL|GPCR|GPCR-2037|PGR7 G protein-coupled receptor 151 protein-coding chr19-1517 chr19 12163820 12164064 + 15.1 0.000 intron (NM_001348013, intron 1 of 2) intron (NM_001348013, intron 1 of 2) 846 NM_003437 7695 Hs.479874 NM_003437 ENSG00000196646 ZNF136 pHZ-20 zinc finger protein 136 protein-coding chr11-1261 chr11 13338272 13338516 + 15.1 0.000 intron (NM_001351821, intron 3 of 19) intron (NM_001351821, intron 3 of 19) 60667 NM_001351823 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding chr10-225 chr10 91220557 91220801 + 15.1 0.000 promoter-TSS (NM_032373) promoter-TSS (NM_032373) 16 NM_032373 84333 Hs.500512 NM_032373 ENSG00000180628 PCGF5 RNF159 polycomb group ring finger 5 protein-coding chr1-1764 chr1 54272394 54272638 + 15.1 0.000 intron (NM_018070, intron 5 of 16) intron (NM_018070, intron 5 of 16) 36073 NR_103541 619518 Hs.591438 NM_001034847 ENSG00000198711 SSBP3-AS1 C1orf191|MST128|MSTP128 SSBP3 antisense RNA 1 ncRNA chr2-1059 chr2 241768388 241768632 + 15.1 0.000 non-coding (NR_109778, exon 8 of 8) non-coding (NR_109778, exon 8 of 8) -8312 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr1-2261 chr1 16924281 16924525 + 15.1 0.000 exon (NM_014675, exon 3 of 37) exon (NM_014675, exon 3 of 37) 2472 NM_014675 9696 Hs.309403 NM_014675 ENSG00000058453 CROCC ROLT|TAX1BP2 ciliary rootlet coiled-coil, rootletin protein-coding chr15-317 chr15 38360615 38360859 + 15.1 0.000 Intergenic L2b|LINE|L2 -93390 NM_173611 283742 Hs.6799 NM_173611 ENSG00000171262 FAM98B - family with sequence similarity 98 member B protein-coding chr17-914 chr17 2029895 2030139 + 15.1 0.000 promoter-TSS (NM_001346574) promoter-TSS (NM_001346574) -95 NR_144476 1801 Hs.513856 NM_001383 ENSG00000108963 DPH1 DEDSSH|DPH2L|DPH2L1|OVCA1 diphthamide biosynthesis 1 protein-coding chr15-395 chr15 73941260 73941504 + 15.1 0.000 intron (NM_005576, intron 1 of 6) intron (NM_005576, intron 1 of 6) -13134 NR_040069 100287616 Hs.599785 NR_040066 ENSG00000261801 LOXL1-AS1 - LOXL1 antisense RNA 1 ncRNA chr1-1976 chr1 2431769 2432013 + 15.1 0.000 Intergenic Intergenic -19320 NM_002617 5192 Hs.732228 NM_002617 ENSG00000157911 PEX10 NALD|PBD6A|PBD6B|RNF69 peroxisomal biogenesis factor 10 protein-coding chr12-818 chr12 32399377 32399621 + 15.1 0.000 promoter-TSS (NM_001370298) promoter-TSS (NM_001370298) -59 NM_001370298 121512 Hs.117835 NM_139241 ENSG00000139132 FGD4 CMT4H|FRABP|ZFYVE6 FYVE, RhoGEF and PH domain containing 4 protein-coding chr4-614 chr4 121304365 121304609 + 15.1 0.000 Intergenic L1M1|LINE|L1 76531 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding chr9-1054 chr9 4489585 4489829 + 15.1 0.000 promoter-TSS (NM_004170) promoter-TSS (NM_004170) -761 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding chr19-1234 chr19 36032840 36033084 + 15.1 0.000 promoter-TSS (NM_001199570) promoter-TSS (NM_001199570) -89 NM_015526 25999 Hs.466539 NM_015526 ENSG00000105270 CLIP3 CLIPR-59|CLIPR59|RSNL1 CAP-Gly domain containing linker protein 3 protein-coding chr9-875 chr9 34810069 34810313 + 15.1 0.000 Intergenic CpG 28395 NR_024481 389715 Hs.713965 NM_001126494 FAM205BP C9orf144|C9orf144A|FAM205B transmembrane protein C9orf144B pseudogene pseudo chr1-1539 chr1 112718790 112719034 + 15.1 0.000 Intergenic Intergenic -1655 NM_182759 284467 Hs.439116 NM_182759 ENSG00000184599 TAFA3 FAM19A3|TAFA-3 TAFA chemokine like family member 3 protein-coding chr19-952 chr19 15363167 15363411 + 15.1 0.000 intron (NM_005858, intron 9 of 13) SVA_C|Retroposon|SVA 16498 NM_005858 10270 Hs.594496 NM_005858 ENSG00000105127 AKAP8 AKAP 95|AKAP-8|AKAP-95|AKAP95 A-kinase anchoring protein 8 protein-coding chr17-1211 chr17 2076408 2076652 + 15.1 0.000 intron (NM_001256827, intron 8 of 11) intron (NM_001256827, intron 8 of 11) 12231 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr1-1148 chr1 27961824 27962068 + 15.1 0.000 intron (NM_018053, intron 1 of 2) intron (NM_018053, intron 1 of 2) 2484 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding chr6-616 chr6 107264294 107264538 + 15.1 0.000 intron (NM_020381, intron 3 of 7) intron (NM_020381, intron 3 of 7) -148901 NM_001367314 57673 Hs.418045 NM_001080450 ENSG00000178409 BEND3 KIAA1553 BEN domain containing 3 protein-coding chr14-170 chr14 54421332 54421576 + 15.1 0.000 Intergenic Intergenic 19920 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding chr19-728 chr19 5377539 5377783 + 15.1 0.000 Intergenic L2a|LINE|L2 -36849 NM_130853 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr11-621 chr11 67606684 67606928 + 15.1 0.000 promoter-TSS (NM_007103) promoter-TSS (NM_007103) -100 NR_130935 100505621 Hs.382074 NM_173578 ENSG00000184224 C11orf72 - chromosome 11 open reading frame 72 (putative) ncRNA chr20-344 chr20 50655413 50655657 + 15.1 0.000 intron (NR_111906, intron 2 of 2) intron (NR_111906, intron 2 of 2) 10064 NR_111906 100506175 Hs.658270 NR_111906 ENSG00000234693 LOC100506175 - uncharacterized LOC100506175 ncRNA chr2-432 chr2 241191082 241191326 + 15.1 0.000 exon (NM_001370694, exon 3 of 25) exon (NM_001370694, exon 3 of 25) 2527 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr11-853 chr11 3865801 3866045 + 15.1 0.000 intron (NM_001277962, intron 1 of 12) intron (NM_001277962, intron 1 of 12) 9861 NR_039835 100616453 NR_039835 ENSG00000284525 MIR4687 - microRNA 4687 ncRNA chr1-2672 chr1 231190636 231190880 + 15.1 0.000 intron (NM_001300889, intron 3 of 11) intron (NM_001300889, intron 3 of 11) -3131 NM_001256615 149373 Hs.632505 NM_001256615 ENSG00000235710 LOC149373 - uncharacterized LOC149373 protein-coding chr9-1272 chr9 100352356 100352600 + 15.1 0.000 promoter-TSS (NM_001161584) promoter-TSS (NM_001161584) 93 NM_001161584 54881 Hs.494648 NM_017746 ENSG00000136891 TEX10 Ipi1|bA208F1.2 testis expressed 10 protein-coding chr2-1788 chr2 110674924 110675168 + 15.1 0.000 intron (NM_001278617, intron 1 of 23) intron (NM_001278617, intron 1 of 23) 3017 NM_004336 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding chr17-858 chr17 40363333 40363577 + 15.1 0.000 exon (NM_152219, exon 1 of 1) exon (NM_152219, exon 1 of 1) 1282 NM_152219 125111 Hs.444663 NM_152219 ENSG00000183153 GJD3 CX31.9|Cx30.2|GJA11|GJC1 gap junction protein delta 3 protein-coding chr22-523 chr22 44803348 44803592 + 15.1 0.000 intron (NM_181335, intron 3 of 11) intron (NM_181335, intron 3 of 11) 50912 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr18-356 chr18 67418007 67418251 + 15.1 0.000 Intergenic Intergenic -98417 NR_033921 643542 Hs.652901 NR_033921 ENSG00000265533 LOC643542 - uncharacterized LOC643542 ncRNA chr14-465 chr14 33982166 33982410 + 15.1 0.000 Intergenic Intergenic -31214 NM_022073 112399 Hs.135507 NM_022073 ENSG00000129521 EGLN3 HIFP4H3|HIFPH3|PHD3 egl-9 family hypoxia inducible factor 3 protein-coding chr7-904 chr7 5581083 5581327 + 15.1 0.000 Intergenic Intergenic -11611 NM_003088 6624 Hs.118400 NM_003088 ENSG00000075618 FSCN1 FAN1|HSN|SNL|p55 fascin actin-bundling protein 1 protein-coding chr2-1507 chr2 120758303 120758547 + 15.1 0.000 intron (NM_001371271, intron 1 of 13) intron (NM_001371271, intron 1 of 13) 22557 NM_001371271 chr3-1439 chr3 146166948 146167192 + 15.1 0.000 Intergenic Arthur1C|DNA|hAT-Tip100 -5575 NM_000935 5352 Hs.477866 NM_000935 ENSG00000152952 PLOD2 BRKS2|LH2|TLH procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 protein-coding chr18-193 chr18 79436582 79436826 + 15.1 0.000 intron (NM_001278672, intron 3 of 8) intron (NM_001278672, intron 3 of 8) 36405 NM_172389 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr4-252 chr4 1247679 1247923 + 15.1 0.000 intron (NM_001012614, intron 1 of 9) CpG 1329 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr2-1433 chr2 3313872 3314116 + 15.1 0.000 intron (NM_001330530, intron 3 of 9) CpG 63824 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr3-1407 chr3 131114275 131114519 + 15.1 0.000 intron (NM_001353036, intron 5 of 14) MLT1I|LTR|ERVL-MaLR 86669 NM_001321223 79858 Hs.657336 NM_024800 ENSG00000114670 NEK11 - NIMA related kinase 11 protein-coding chr9-608 chr9 122852458 122852702 + 15.1 0.000 intron (NM_001100588, intron 18 of 20) SVA_D|Retroposon|SVA -23992 NM_005388 5082 Hs.271749 NM_005388 ENSG00000136940 PDCL PhLP phosducin like protein-coding chr18-366 chr18 80210099 80210343 + 15.1 0.000 intron (NM_032510, intron 1 of 2) L1M4|LINE|L1 37293 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr12-1049 chr12 8697232 8697476 + 15.1 0.000 promoter-TSS (NM_001352269) promoter-TSS (NM_001352269) 171 NM_001352268 57494 Hs.504670 NM_020734 ENSG00000166532 RIMKLB FAM80B|NAAGS|NAAGS-I ribosomal modification protein rimK like family member B protein-coding chr2-475 chr2 218323390 218323634 + 15.1 0.000 intron (NM_022572, intron 1 of 8) G-rich|Low_complexity|Low_complexity 333 NM_022572 25953 Hs.98475 NM_015488 ENSG00000127838 PNKD BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR-1S|MR1|PDC|PKND1|PNKD1|TAHCCP2 PNKD metallo-beta-lactamase domain containing protein-coding chrX-420 chrX 14479018 14479262 + 15.1 0.000 Intergenic Intergenic -50158 NM_001171942 2742 Hs.2700 NM_002063 ENSG00000101958 GLRA2 GLR glycine receptor alpha 2 protein-coding chr7-800 chr7 900279 900523 + 15.1 0.000 intron (NM_006869, intron 7 of 10) intron (NM_006869, intron 7 of 10) 20488 NM_001284311 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr2-1448 chr2 26961552 26961796 + 15.1 0.000 Intergenic Intergenic -8963 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr7-760 chr7 98944719 98944963 + 15.1 0.000 intron (NM_003496, intron 31 of 70) AluSx1|SINE|Alu 63144 NR_132754 106633801 NR_132754 SCARNA28 ZL1 small Cajal body-specific RNA 28 ncRNA chr4-499 chr4 3465116 3465360 + 15.1 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 1932 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr19-645 chr19 58154468 58154712 + 15.1 0.000 Intergenic Intergenic -3801 NM_024620 79673 Hs.458377 NM_024620 ENSG00000181894 ZNF329 - zinc finger protein 329 protein-coding chr1-1556 chr1 155931135 155931379 + 15.1 0.000 intron (NM_014949, intron 2 of 13) AluJb|SINE|Alu 3156 NM_014949 22889 Hs.24656 NM_014949 ENSG00000132680 KHDC4 BLOM7|KIAA0907|SNORA80EHG KH domain containing 4, pre-mRNA splicing factor protein-coding chr2-1871 chr2 177784690 177784934 + 15.1 0.000 intron (NM_001077197, intron 10 of 20) intron (NM_001077197, intron 10 of 20) 103944 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr9-1246 chr9 91162551 91162795 + 15.1 0.000 intron (NR_135306, intron 2 of 2) intron (NR_135306, intron 2 of 2) 43611 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA chr11-1180 chr11 75345141 75345385 + 15.1 0.000 intron (NM_004041, intron 1 of 15) intron (NM_004041, intron 1 of 15) 6398 NM_020251 408 Hs.503284 NM_004041 ENSG00000137486 ARRB1 ARB1|ARR1 arrestin beta 1 protein-coding chr10-1077 chr10 2789674 2789918 + 15.1 0.000 Intergenic Intergenic 277137 NR_160681 101927824 NR_160681 LOC101927824 - uncharacterized LOC101927824 ncRNA chr20-104 chr20 23637774 23638018 + 15.1 0.000 promoter-TSS (NM_000099) promoter-TSS (NM_000099) 59 NM_000099 1471 Hs.304682 NM_000099 ENSG00000101439 CST3 ARMD11|HEL-S-2 cystatin C protein-coding chrX-281 chrX 19513931 19514175 + 15.1 0.000 intron (NM_001001671, intron 1 of 28) intron (NM_001001671, intron 1 of 28) 1208 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding chr14-373 chr14 75069509 75069753 + 15.1 0.000 promoter-TSS (NM_001302617) promoter-TSS (NM_001302617) -10 NM_001330191 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding chr16-885 chr16 88383943 88384187 + 15.1 0.000 Intergenic CpG -43406 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr8-681 chr8 122816966 122817210 + 15.1 0.000 intron (NM_001362797, intron 1 of 4) MLT1J2|LTR|ERVL-MaLR 35433 NM_014943 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding chr7-1248 chr7 29989508 29989752 + 15.1 0.000 intron (NM_001145514, intron 1 of 7) CpG 171 NM_001145515 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding chr2-1977 chr2 237157805 237158049 + 15.1 0.000 Intergenic Tigger3c|DNA|TcMar-Tigger 72038 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding chr18-300 chr18 10454510 10454754 + 15.1 0.000 promoter-TSS (NM_153000) promoter-TSS (NM_153000) -3 NM_153000 147495 Hs.293274 NM_153000 ENSG00000154856 APCDD1 B7323|DRAPC1|FP7019|HHS|HTS|HYPT1 APC down-regulated 1 protein-coding chrX-462 chrX 51182627 51182871 + 15.1 0.000 Intergenic Intergenic -11328 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA chr19-1034 chr19 1230733 1230977 + 15.1 0.000 3' UTR (NM_152769, exon 9 of 9) 3' UTR (NM_152769, exon 9 of 9) 7150 NM_152769 255057 Hs.346575 NM_152769 ENSG00000099625 CBARP BARP|C19orf26|DOS CACN subunit beta associated regulatory protein protein-coding chr3-1028 chr3 141894814 141895058 + 15.1 0.000 intron (NM_001679, intron 1 of 6) Tigger3b|DNA|TcMar-Tigger 18293 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chrX-211 chrX 85125430 85125674 + 15.1 0.000 intron (NM_001367858, intron 3 of 11) intron (NM_001367858, intron 3 of 11) -16584 NM_001012980 340562 Hs.640783 NM_001012980 ENSG00000184788 SATL1 - spermidine/spermine N1-acetyl transferase like 1 protein-coding chr11-1218 chr11 118434601 118434845 + 15.1 0.000 Intergenic CpG -1767 NM_001197104 4297 Hs.258855 NM_005933 ENSG00000118058 KMT2A ALL-1|CXXC7|HRX|HTRX1|MLL|MLL1|MLL1A|TRX1|WDSTS lysine methyltransferase 2A protein-coding chr4-444 chr4 726563 726807 + 15.1 0.000 intron (NM_001317836, intron 1 of 11) intron (NM_001317836, intron 1 of 11) 20853 NM_006315 10336 Hs.144309 NM_006315 ENSG00000185619 PCGF3 DONG1|RNF3|RNF3A polycomb group ring finger 3 protein-coding chr19-791 chr19 7871603 7871847 + 15.1 0.000 exon (NM_001190467, exon 5 of 6) exon (NM_001190467, exon 5 of 6) 2665 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr12-1028 chr12 1458047 1458291 + 15.1 0.000 intron (NR_027948, intron 19 of 19) intron (NR_027948, intron 19 of 19) -42322 NR_028415 100292680 Hs.391695 NR_028415 ENSG00000249628 LINC00942 - long intergenic non-protein coding RNA 942 ncRNA chr5-1069 chr5 95762275 95762519 + 15.1 0.000 intron (NM_014899, intron 6 of 11) intron (NM_014899, intron 6 of 11) -30295 NM_001349303 83890 Hs.50499 NM_031952 ENSG00000145757 SPATA9 NYD-SP16 spermatogenesis associated 9 protein-coding chr4-1112 chr4 182190258 182190502 + 15.1 0.000 Intergenic Intergenic 21087 NR_031640 100302270 NR_031640 ENSG00000221227 MIR1305 MIRN1305|hsa-mir-1305|mir-1305 microRNA 1305 ncRNA chr3-701 chr3 18099256 18099500 + 15.1 0.000 intron (NR_161333, intron 4 of 4) intron (NR_161333, intron 4 of 4) 136826 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA chr6-927 chr6 22459514 22459758 + 15.1 0.000 Intergenic Intergenic -109930 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding chr6-623 chr6 121400982 121401226 + 15.1 0.000 Intergenic Intergenic -34542 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr2-1069 chr2 24111432 24111676 + 15.1 0.000 intron (NR_111929, intron 3 of 5) intron (NR_111929, intron 3 of 5) 11780 NM_199346 375189 Hs.442718 NM_199346 ENSG00000176732 PFN4 - profilin family member 4 protein-coding chr16-903 chr16 89858428 89858672 + 15.1 0.000 intron (NM_032451, intron 8 of 14) intron (NM_032451, intron 8 of 14) -15042 NM_014972 22980 Hs.415342 NM_014972 ENSG00000141002 TCF25 FKSG26|Hulp1|NULP1|PRO2620|hKIAA1049 transcription factor 25 protein-coding chr14-587 chr14 103131167 103131411 + 15.1 0.000 intron (NM_001371220, intron 7 of 12) intron (NM_001371220, intron 7 of 12) 4983 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr7-233 chr7 129144578 129144822 + 15.1 0.000 promoter-TSS (NM_178562) promoter-TSS (NM_178562) -7 NM_178562 340348 Hs.27267 NM_178562 ENSG00000158457 TSPAN33 PEN|PEN.|TSPAN-33 tetraspanin 33 protein-coding chr1-1826 chr1 119873743 119873987 + 15.1 0.000 Intergenic Intergenic 22650 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding chr19-1218 chr19 18856799 18857043 + 15.1 0.000 exon (NM_001297549, exon 14 of 24) exon (NM_001297549, exon 14 of 24) 24962 NM_002911 5976 Hs.515266 NM_002911 ENSG00000005007 UPF1 HUPF1|NORF1|RENT1|pNORF1|smg-2 UPF1 RNA helicase and ATPase protein-coding chr9-1337 chr9 127844950 127845194 + 15.1 0.000 intron (NM_001114753, intron 1 of 14) intron (NM_001114753, intron 1 of 14) 2095 NM_001278138 2022 Hs.76753 NM_000118 ENSG00000106991 ENG END|HHT1|ORW1 endoglin protein-coding chr19-997 chr19 45816641 45816885 + 15.1 0.000 intron (NM_004819, intron 24 of 26) intron (NM_004819, intron 24 of 26) -1455 NM_030785 81492 Hs.146544 NM_030785 ENSG00000104941 RSPH6A RSHL1|RSP4|RSP6|RSPH4B radial spoke head 6 homolog A protein-coding chr8-750 chr8 66613898 66614142 + 15.1 0.000 promoter-TSS (NM_001080416) promoter-TSS (NM_001080416) -802 NM_001080416 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr15-645 chr15 51751566 51751810 + 15.1 0.000 promoter-TSS (NM_001143917) promoter-TSS (NM_001143917) 91 NM_001142885 29767 Hs.513734 NM_014548 ENSG00000128872 TMOD2 N-TMOD|NTMOD tropomodulin 2 protein-coding chr15-749 chr15 98077219 98077463 + 15.1 0.000 Intergenic Intergenic 11412 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA chr14-787 chr14 102139164 102139408 + 15.1 0.000 promoter-TSS (NR_148510) promoter-TSS (NR_148510) -137 NM_001353668 91833 Hs.36859 NM_144574 ENSG00000140153 WDR20 DMR WD repeat domain 20 protein-coding chr2-1935 chr2 219441413 219441657 + 15.1 0.000 intron (NM_005876, intron 1 of 40) intron (NM_005876, intron 1 of 40) 6692 NM_005876 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr10-1101 chr10 19843641 19843885 + 15.1 0.000 intron (NM_032812, intron 1 of 13) L1MA4A|LINE|L1 27331 NM_032812 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding chr11-948 chr11 110429876 110430120 + 15.1 0.000 promoter-TSS (NM_004109) promoter-TSS (NM_004109) 50 NM_004109 2230 Hs.744 NM_004109 ENSG00000137714 FDX1 ADX|FDX|LOH11CR1D ferredoxin 1 protein-coding chr10-528 chr10 93445519 93445763 + 15.1 0.000 intron (NM_013451, intron 3 of 53) intron (NM_013451, intron 3 of 53) 36693 NM_013451 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding chr22-401 chr22 39588139 39588383 + 15.1 0.000 intron (NM_001003406, intron 1 of 35) AluJo|SINE|Alu 17508 NM_021096 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr13-490 chr13 75700514 75700758 + 15.1 0.000 intron (NM_001306080, intron 1 of 30) MER44C|DNA|TcMar-Tigger -59684 NM_001366633 4008 Hs.207631 NM_005358 ENSG00000136153 LMO7 FBX20|FBXO20|LMO7b|LOMP LIM domain 7 protein-coding chr15-730 chr15 84921179 84921423 + 15.1 0.000 intron (NM_001287761, intron 10 of 14) intron (NM_001287761, intron 10 of 14) 36639 NM_001321722 9154 Hs.459187 NM_004213 ENSG00000156222 SLC28A1 CNT1|HCNT1 solute carrier family 28 member 1 protein-coding chr7-1095 chr7 44103741 44103985 + 15.1 0.000 promoter-TSS (NM_001129) promoter-TSS (NM_001129) -482 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr7-1242 chr7 27844198 27844442 + 15.1 0.000 intron (NM_175061, intron 3 of 4) intron (NM_175061, intron 3 of 4) 104225 NM_006024 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding chr7-410 chr7 2560022 2560266 + 15.1 0.000 intron (NM_001287501, intron 1 of 19) AluJr|SINE|Alu 1165 NM_152558 23288 Hs.520627 NM_152558 ENSG00000106012 IQCE 1700028P05Rik|PAPA7 IQ motif containing E protein-coding chr1-2681 chr1 237386270 237386514 + 15.1 0.000 intron (NM_001035, intron 8 of 104) intron (NM_001035, intron 8 of 104) -84727 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA chr3-930 chr3 16130052 16130296 + 15.1 0.000 Intergenic Intergenic -44506 NM_054110 117248 Hs.411308 NM_054110 ENSG00000131386 GALNT15 GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15 polypeptide N-acetylgalactosaminyltransferase 15 protein-coding chr1-1065 chr1 146052558 146052802 + 15.1 0.000 promoter-TSS (NR_104085) promoter-TSS (NR_104085) 84 NR_125968 101928979 Hs.735893 NR_125967 ENSG00000233396 LINC01719 - long intergenic non-protein coding RNA 1719 ncRNA chr3-1116 chr3 48347474 48347718 + 15.1 0.000 Intergenic LTR16E1|LTR|ERVL -19255 NM_001080525 646424 Hs.257687 NM_001080525 ENSG00000229453 SPINK8 - serine peptidase inhibitor, Kazal type 8 (putative) protein-coding chr6-712 chr6 108558407 108558651 + 15.1 0.000 Intergenic CpG -1296 NM_201559 2309 Hs.220950 NM_001455 ENSG00000118689 FOXO3 AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A forkhead box O3 protein-coding chr2-1970 chr2 234335753 234335997 + 15.1 0.000 Intergenic Intergenic 118720 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA chr2-1259 chr2 72887821 72888065 + 15.1 0.000 intron (NM_003124, intron 1 of 2) intron (NM_003124, intron 1 of 2) 535 NM_003124 6697 Hs.301540 NM_003124 ENSG00000116096 SPR SDR38C1 sepiapterin reductase protein-coding chr19-1495 chr19 8148988 8149232 + 15.1 0.000 promoter-TSS (NM_001321431) promoter-TSS (NM_001321431) -241 NM_001321431 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr6-1018 chr6 77293146 77293390 + 15.1 0.000 Intergenic Intergenic 170754 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding chrX-265 chrX 118728076 118728320 + 15.1 0.000 intron (NM_001560, intron 1 of 10) CpG 592 NM_001560 3597 Hs.496646 NM_001560 ENSG00000131724 IL13RA1 CD213A1|CT19|IL-13Ra|NR4 interleukin 13 receptor subunit alpha 1 protein-coding chr1-2472 chr1 109271223 109271467 + 15.1 0.000 intron (NM_001408, intron 26 of 33) intron (NM_001408, intron 26 of 33) 11799 NM_001350237 84722 Hs.405925 NM_032636 ENSG00000134222 PSRC1 DDA3|FP3214 proline and serine rich coiled-coil 1 protein-coding chr20-545 chr20 20034524 20034768 + 15.0 0.000 TTS (NM_016100) TTS (NM_016100) 16851 NM_181527 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding ML143350.1-1 ML143350.1 43115 43359 + 15.0 0.000 NA NA NA NA chr7-1318 chr7 74478172 74478416 + 15.0 0.000 intron (NM_016328, intron 1 of 26) intron (NM_016328, intron 1 of 26) 24388 NM_001199207 9569 Hs.647056 NM_005685 ENSG00000006704 GTF2IRD1 BEN|CREAM1|GTF3|MUSTRD1|RBAP2|WBS|WBSCR11|WBSCR12|hMusTRD1alpha1 GTF2I repeat domain containing 1 protein-coding chr13-535 chr13 112960744 112960988 + 15.0 0.000 Intergenic MLT1D|LTR|ERVL-MaLR 7772 NR_034002 100289410 Hs.667436 NR_034002 MCF2L-AS1 - MCF2L antisense RNA 1 ncRNA chr16-391 chr16 31010644 31010888 + 15.0 0.000 promoter-TSS (NM_052874) promoter-TSS (NM_052874) -128 NM_052874 112755 Hs.542230 NM_052874 ENSG00000099365 STX1B GEFSP9|STX1B1|STX1B2 syntaxin 1B protein-coding chr11-584 chr11 115148543 115148787 + 15.0 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -184912 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA chr19-1499 chr19 8831816 8832060 + 15.0 0.000 intron (NM_144693, intron 1 of 9) MER20|DNA|hAT-Charlie 366 NM_144693 148156 Hs.349444 NM_144693 ENSG00000167785 ZNF558 - zinc finger protein 558 protein-coding chrX-565 chrX 153550446 153550690 + 15.0 0.000 intron (NM_001001344, intron 10 of 19) L1MB4|LINE|L1 14446 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr2-1199 chr2 15591600 15591844 + 15.0 0.000 promoter-TSS (NM_004939) promoter-TSS (NM_004939) -146 NM_004939 1653 Hs.440599 NM_004939 ENSG00000079785 DDX1 DBP-RB|UKVH5d DEAD-box helicase 1 protein-coding chr2-1578 chr2 238947866 238948110 + 15.0 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21719 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA chr10-517 chr10 77972073 77972317 + 15.0 0.000 Intergenic Intergenic 45383 NR_024585 100128292 Hs.547908 NR_024585 DLG5-AS1 - DLG5 antisense RNA 1 ncRNA chr13-274 chr13 113026229 113026473 + 15.0 0.000 intron (NM_001320815, intron 3 of 30) intron (NM_001320815, intron 3 of 30) -18295 NM_001366646 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr2-1052 chr2 237874623 237874867 + 15.0 0.000 intron (NM_001308353, intron 2 of 3) intron (NM_001308353, intron 2 of 3) 15122 NM_005855 10267 Hs.471783 NM_005855 ENSG00000132329 RAMP1 - receptor activity modifying protein 1 protein-coding chr16-343 chr16 71859786 71860030 + 15.0 0.000 3' UTR (NM_001318239, exon 7 of 7) 3' UTR (NM_001318239, exon 7 of 7) 13932 NM_001137675 342371 Hs.743239 NM_001137675 ENSG00000224470 ATXN1L BOAT|BOAT1 ataxin 1 like protein-coding chr10-430 chr10 97771447 97771691 + 15.0 0.000 exon (NM_003015, exon 1 of 3) exon (NM_003015, exon 1 of 3) 430 NM_003015 6425 Hs.279565 NM_003015 ENSG00000120057 SFRP5 SARP3 secreted frizzled related protein 5 protein-coding chr5-1179 chr5 173670213 173670457 + 15.0 0.000 Intergenic Intergenic -19124 NR_146727 105377736 Hs.582570 NR_146727 ENSG00000253428 LINC01942 - long intergenic non-protein coding RNA 1942 ncRNA chr2-1082 chr2 45699259 45699503 + 15.0 0.000 intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 47706 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding chr15-280 chr15 42548692 42548936 + 15.0 0.000 promoter-TSS (NM_001130447) promoter-TSS (NM_001130447) 1 NM_001323629 55142 Hs.14347 NM_018097 ENSG00000137814 HAUS2 C15orf25|CEP27|HsT17025 HAUS augmin like complex subunit 2 protein-coding chr11-1190 chr11 78801631 78801875 + 15.0 0.000 intron (NM_001098816, intron 15 of 33) intron (NM_001098816, intron 15 of 33) -226889 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding chr7-1058 chr7 157355605 157355849 + 15.0 0.000 intron (NM_005494, intron 1 of 7) intron (NM_005494, intron 1 of 7) 18723 NM_005494 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr15-502 chr15 68559603 68559847 + 15.0 0.000 intron (NM_001324014, intron 2 of 12) CpG -19268 NM_006091 10391 Hs.551213 NM_006091 ENSG00000103647 CORO2B CLIPINC coronin 2B protein-coding chr8-918 chr8 96584174 96584418 + 15.0 0.000 intron (NM_002998, intron 1 of 4) intron (NM_002998, intron 1 of 4) -60946 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr19-1676 chr19 57559707 57559951 + 15.0 0.000 promoter-TSS (NM_001277092) promoter-TSS (NM_001277092) 34 NM_001277092 162972 Hs.180257 NM_153231 ENSG00000251369 ZNF550 - zinc finger protein 550 protein-coding chr12-557 chr12 132521966 132522210 + 15.0 0.000 intron (NM_001142641, intron 2 of 16) intron (NM_001142641, intron 2 of 16) 31937 NM_001142641 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr21-250 chr21 42547793 42548037 + 15.0 0.000 intron (NM_001320537, intron 9 of 19) L2|LINE|L2 34063 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr1-2432 chr1 87149809 87150053 + 15.0 0.000 intron (NR_026989, intron 2 of 2) intron (NR_026989, intron 2 of 2) 18005 NR_026985 339524 Hs.306423 NM_207357 ENSG00000267272 LINC01140 - long intergenic non-protein coding RNA 1140 ncRNA chr4-953 chr4 40185916 40186160 + 15.0 0.000 Intergenic Intergenic -5042 NM_001278368 399 Hs.654594 NM_004310 ENSG00000168421 RHOH ARHH|TTF ras homolog family member H protein-coding chr17-874 chr17 62689592 62689836 + 15.0 0.000 exon (NM_006039, exon 24 of 30) exon (NM_006039, exon 24 of 30) -16492 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr10-1098 chr10 15719966 15720210 + 15.0 0.000 promoter-TSS (NM_003638) promoter-TSS (NM_003638) -166 NM_003638 8516 Hs.171311 NM_003638 ENSG00000077943 ITGA8 - integrin subunit alpha 8 protein-coding chr17-1022 chr17 65123220 65123464 + 15.0 0.000 Intergenic CpG -13996 NM_001165933 8787 Hs.664380 NM_003835 ENSG00000108370 RGS9 PERRS|RGS9L regulator of G protein signaling 9 protein-coding chr16-773 chr16 1279664 1279908 + 15.0 0.000 Intergenic Intergenic 23717 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr7-1353 chr7 100631767 100632011 + 15.0 0.000 exon (NM_001206855, exon 5 of 15) exon (NM_001206855, exon 5 of 15) 1761 NM_001206855 7036 Hs.544932 NM_003227 ENSG00000106327 TFR2 HFE3|TFRC2 transferrin receptor 2 protein-coding chr16-801 chr16 12803784 12804028 + 15.0 0.000 promoter-TSS (NM_001099455) promoter-TSS (NM_001099455) -19 NM_018340 55313 Hs.460002 NM_018340 ENSG00000103381 CPPED1 CSTP1 calcineurin like phosphoesterase domain containing 1 protein-coding chr5-404 chr5 177370784 177371028 + 15.0 0.000 exon (NM_001366617, exon 11 of 15) exon (NM_001366617, exon 11 of 15) 12982 NM_001366618 10636 Hs.9347 NM_006480 ENSG00000169220 RGS14 - regulator of G protein signaling 14 protein-coding chr20-453 chr20 62393115 62393359 + 15.0 0.000 intron (NM_031215, intron 6 of 9) intron (NM_031215, intron 6 of 9) 6134 NM_001024 6227 Hs.190968 NM_001024 ENSG00000171858 RPS21 HLDF|S21 ribosomal protein S21 protein-coding chr19-1570 chr19 31214202 31214446 + 15.0 0.000 intron (NR_138036, intron 2 of 4) intron (NR_138036, intron 2 of 4) 46814 NR_147209 107985312 Hs.211053 NR_147209 ENSG00000267777 LINC01791 - long intergenic non-protein coding RNA 1791 ncRNA chr11-970 chr11 1780119 1780363 + 15.0 0.000 Intergenic Intergenic -16314 NM_001909 1509 Hs.654447 NM_001909 ENSG00000117984 CTSD CLN10|CPSD|HEL-S-130P cathepsin D protein-coding chr19-971 chr19 22634197 22634441 + 15.0 0.000 promoter-TSS (NM_020855) promoter-TSS (NM_020855) -5 NM_020855 57615 Hs.232108 NM_020855 ENSG00000229676 ZNF492 ZNF115 zinc finger protein 492 protein-coding chr10-968 chr10 6221722 6221966 + 15.0 0.000 intron (NM_001314063, intron 10 of 15) intron (NM_001314063, intron 10 of 15) 18912 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr18-256 chr18 76395155 76395399 + 15.0 0.000 intron (NM_014643, intron 3 of 6) intron (NM_014643, intron 3 of 6) -96375 NR_136504 101927989 Hs.665186 NR_136504 ENSG00000265778 LOC101927989 - uncharacterized LOC101927989 ncRNA chr19-1197 chr19 12721070 12721314 + 15.0 0.000 intron (NM_001136195, intron 2 of 25) CpG 1067 NM_013433 30000 Hs.416049 NM_013433 ENSG00000105576 TNPO2 IPO3|KPNB2B|TRN2 transportin 2 protein-coding chr13-409 chr13 100884567 100884811 + 15.0 0.000 intron (NR_047687, intron 2 of 7) intron (NR_047687, intron 2 of 7) 59675 NR_047015 100874161 Hs.143791 NR_047015 LINC00411 - long intergenic non-protein coding RNA 411 ncRNA chr3-949 chr3 46464493 46464737 + 15.0 0.000 promoter-TSS (NM_001199149) promoter-TSS (NM_001199149) 290 NM_001321121 4057 Hs.529517 NM_002343 ENSG00000012223 LTF GIG12|HEL110|HLF2|LF lactotransferrin protein-coding chr3-1444 chr3 152269893 152270137 + 15.0 0.000 promoter-TSS (NR_027037) promoter-TSS (NR_027037) -389 NR_027038 401093 Hs.725347 NR_027037 ENSG00000229619 MBNL1-AS1 - MBNL1 antisense RNA 1 ncRNA chr19-884 chr19 45166476 45166720 + 15.0 0.000 intron (NM_001270891, intron 1 of 5) intron (NM_001270891, intron 1 of 5) -6448 NM_198478 284353 Hs.299256 NM_198478 NKPD1 - NTPase KAP family P-loop domain containing 1 protein-coding chr1-2398 chr1 58816525 58816769 + 15.0 0.000 intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 31496 NR_034014 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA chr1-638 chr1 33180689 33180933 + 15.0 0.000 intron (NM_018207, intron 1 of 4) CpG 1232 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr19-1490 chr19 7767697 7767941 + 15.0 0.000 intron (NM_014257, intron 6 of 6) intron (NM_014257, intron 6 of 6) 4576 NM_001144907 10332 Hs.421437 NM_014257 ENSG00000104938 CLEC4M CD209L|CD299|DC-SIGN2|DC-SIGNR|DCSIGNR|HP10347|L-SIGN|LSIGN C-type lectin domain family 4 member M protein-coding chr19-1441 chr19 2306131 2306375 + 15.0 0.000 intron (NM_001101391, intron 1 of 1) MIRb|SINE|MIR 1901 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr17-468 chr17 3004069 3004313 + 15.0 0.000 intron (NM_001330058, intron 14 of 24) intron (NM_001330058, intron 14 of 24) -38296 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr16-1045 chr16 2719411 2719655 + 15.0 0.000 intron (NM_001318395, intron 1 of 4) intron (NM_001318395, intron 1 of 4) 691 NM_001318395 83886 Hs.332878 NM_031948 ENSG00000172382 PRSS27 CAPH2|MPN serine protease 27 protein-coding chr8-344 chr8 55773107 55773351 + 15.0 0.000 promoter-TSS (NM_001363184) promoter-TSS (NM_001363184) 149 NM_152417 137695 Hs.420076 NM_152417 ENSG00000167904 TMEM68 - transmembrane protein 68 protein-coding chr4-191 chr4 176274750 176274994 + 15.0 0.000 Intergenic Intergenic -5650 NM_080874 140458 Hs.591712 NM_080874 ENSG00000164122 ASB5 ASB-5 ankyrin repeat and SOCS box containing 5 protein-coding chr3-1341 chr3 73389365 73389609 + 15.0 0.000 intron (NM_001303139, intron 5 of 7) intron (NM_001303139, intron 5 of 7) 44508 NM_001303142 23024 Hs.660347 NM_015009 ENSG00000121440 PDZRN3 LNX3|SEMACAP3|SEMCAP3 PDZ domain containing ring finger 3 protein-coding chr8-885 chr8 66560783 66561027 + 15.0 0.000 Intergenic Intergenic 52313 NM_001294282 4603 Hs.445898 NM_001080416 ENSG00000185697 MYBL1 A-MYB|AMYB MYB proto-oncogene like 1 protein-coding chr19-1668 chr19 55095945 55096189 + 15.0 0.000 exon (NM_017607, exon 8 of 22) exon (NM_017607, exon 8 of 22) 15675 NM_017729 54869 Hs.438862 NM_017729 ENSG00000131037 EPS8L1 DRC3|EPS8R1|PP10566 EPS8 like 1 protein-coding chr18-281 chr18 53095532 53095776 + 15.0 0.000 intron (NM_005215, intron 7 of 28) MLT1D|LTR|ERVL-MaLR -141447 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr12-1141 chr12 57591535 57591779 + 15.0 0.000 intron (NM_024779, intron 1 of 9) intron (NM_024779, intron 1 of 9) 465 NM_001146258 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr14-524 chr14 49600130 49600374 + 15.0 0.000 intron (NM_152329, intron 1 of 3) intron (NM_152329, intron 1 of 3) 1312 NM_152329 122769 Hs.451090 NM_152329 ENSG00000165501 LRR1 4-1BBLRR|LRR-1|PPIL5 leucine rich repeat protein 1 protein-coding chr16-717 chr16 28193892 28194136 + 15.0 0.000 intron (NM_015171, intron 1 of 23) MIRb|SINE|MIR 17951 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr1-1432 chr1 204828544 204828788 + 15.0 0.000 promoter-TSS (NM_001160333) promoter-TSS (NM_001160333) 12 NM_015090 23114 Hs.13349 NM_015090 ENSG00000163531 NFASC NEDCPMD|NF|NRCAML neurofascin protein-coding chr16-925 chr16 3058490 3058734 + 15.0 0.000 exon (NM_022468, exon 9 of 10) exon (NM_022468, exon 9 of 10) 758 NR_123723 100507419 Hs.312579 NR_123723 MMP25-AS1 - MMP25 antisense RNA 1 ncRNA chr20-309 chr20 64044738 64044982 + 15.0 0.000 Intergenic Intergenic 4779 NM_018419 54345 Hs.8619 NM_018419 ENSG00000203883 SOX18 HLTRS|HLTS SRY-box transcription factor 18 protein-coding chr5-623 chr5 150357331 150357575 + 15.0 0.000 promoter-TSS (NM_001195141) promoter-TSS (NM_001195141) -186 NM_001135243 6949 Hs.519672 NM_000356 ENSG00000070814 TCOF1 MFD1|TCS|TCS1|treacle treacle ribosome biogenesis factor 1 protein-coding chr2-1365 chr2 203492387 203492631 + 15.0 0.000 intron (NM_001329728, intron 2 of 15) intron (NM_001329728, intron 2 of 15) 42792 NM_213589 65059 Hs.471162 NM_025252 ENSG00000173166 RAPH1 ALS2CR18|ALS2CR9|LPD|PREL-2|PREL2|RMO1|RalGDS/AF-6 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein-coding chr1-1659 chr1 14598838 14599082 + 15.0 0.000 5' UTR (NM_015209, exon 1 of 8) 5' UTR (NM_015209, exon 1 of 8) 243 NM_015209 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding chr19-798 chr19 14689798 14690042 + 15.0 0.000 promoter-TSS (NM_032433) promoter-TSS (NM_032433) -128 NM_001352239 84449 Hs.515215 NM_032433 ENSG00000160961 ZNF333 - zinc finger protein 333 protein-coding chr17-1040 chr17 76121494 76121738 + 15.0 0.000 Intergenic CpG -17829 NM_015219 23265 Hs.514496 NM_015219 ENSG00000182473 EXOC7 2-5-3p|BLOM4|EX070|EXO70|EXOC1|Exo70p|YJL085W exocyst complex component 7 protein-coding chr9-987 chr9 130243628 130243872 + 15.0 0.000 Intergenic Intergenic 2363 NR_162140 113219459 NR_162140 MIR12126 - microRNA 12126 ncRNA chr2-1850 chr2 154253759 154254003 + 15.0 0.000 intron (NM_052917, intron 7 of 12) intron (NM_052917, intron 7 of 12) 203557 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr6-1007 chr6 71469129 71469373 + 15.0 0.000 Intergenic Intergenic 48224 NR_121615 102724000 Hs.145785 NR_121615 LINC01626 - long intergenic non-protein coding RNA 1626 ncRNA chr9-1357 chr9 130337971 130338215 + 15.0 0.000 intron (NM_001291815, intron 23 of 97) intron (NM_001291815, intron 23 of 97) 72333 NM_001291815 256158 Hs.32194 NM_144655 ENSG00000148357 HMCN2 - hemicentin 2 protein-coding chr12-346 chr12 109266708 109266952 + 15.0 0.000 3' UTR (NM_001093, exon 53 of 53) 3' UTR (NM_001093, exon 53 of 53) 42454 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr8-433 chr8 273968 274212 + 15.0 0.000 Intergenic G-rich|Low_complexity|Low_complexity 41634 NM_001042415 169270 Hs.591388 NM_173539 ENSG00000172748 ZNF596 - zinc finger protein 596 protein-coding chr20-531 chr20 5504451 5504695 + 15.0 0.000 promoter-TSS (NR_015406) promoter-TSS (NR_015406) 23 NR_015406 149837 Hs.123609 NR_015406 ENSG00000205181 LINC00654 - long intergenic non-protein coding RNA 654 ncRNA chr14-281 chr14 103629128 103629372 + 15.0 0.000 promoter-TSS (NM_005552) promoter-TSS (NM_005552) 62 NM_005552 3831 Hs.20107 NM_005552 ENSG00000126214 KLC1 KLC|KNS2|KNS2A kinesin light chain 1 protein-coding chr7-1364 chr7 101527925 101528169 + 15.0 0.000 intron (NM_133457, intron 3 of 12) intron (NM_133457, intron 3 of 12) 40959 NR_103749 100506527 Hs.535863 NR_103747 ENSG00000233123 LINC01007 - long intergenic non-protein coding RNA 1007 ncRNA chr16-924 chr16 2986975 2987219 + 15.0 0.000 Intergenic Intergenic -1957 NR_033861 283875 Hs.620489 NR_033861 LINC00514 LA16c-380H5.1 long intergenic non-protein coding RNA 514 ncRNA chr8-498 chr8 66432458 66432702 + 15.0 0.000 promoter-TSS (NM_144650) promoter-TSS (NM_144650) 76 NM_144650 137872 Hs.720023 NM_144650 ENSG00000147576 ADHFE1 ADH8|HMFT2263|HOT alcohol dehydrogenase iron containing 1 protein-coding chr6-565 chr6 153090457 153090701 + 15.0 0.000 intron (NM_012419, intron 1 of 4) AluJo|SINE|Alu 40703 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding chr1-2216 chr1 8941959 8942203 + 15.0 0.000 Intergenic Intergenic -3787 NM_001270502 765 Hs.100322 NM_001215 ENSG00000131686 CA6 CA-VI|GUSTIN carbonic anhydrase 6 protein-coding chr15-713 chr15 79922868 79923112 + 15.0 0.000 non-coding (NR_028330, exon 1 of 1) non-coding (NR_028330, exon 1 of 1) 116 NM_001199760 100528021 Hs.459049 NM_001199760 ENSG00000259332 ST20-MTHFS MTHFS ST20-MTHFS readthrough protein-coding chr17-1248 chr17 15315996 15316240 + 15.0 0.000 intron (NM_031898, intron 5 of 8) intron (NM_031898, intron 5 of 8) 25479 NM_031898 64518 Hs.414648 NM_031898 ENSG00000125409 TEKT3 - tektin 3 protein-coding chr7-1336 chr7 90597365 90597609 + 15.0 0.000 intron (NM_001287135, intron 1 of 14) intron (NM_001287135, intron 1 of 14) 1166 NM_001287135 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding chr16-793 chr16 10681844 10682088 + 15.0 0.000 intron (NM_144674, intron 4 of 6) intron (NM_144674, intron 4 of 6) 12964 NM_144674 146279 Hs.143519 NM_144674 ENSG00000153060 TEKT5 CT149 tektin 5 protein-coding chr19-1110 chr19 47323135 47323379 + 15.0 0.000 Intergenic AluSg|SINE|Alu -8918 NM_001271749 27202 Hs.534412 NM_018485 ENSG00000134830 C5AR2 C5L2|GPF77|GPR77 complement component 5a receptor 2 protein-coding chr20-583 chr20 34999262 34999506 + 15.0 0.000 exon (NM_020884, exon 36 of 45) exon (NM_020884, exon 36 of 45) -8912 NR_039912 100616134 NR_039912 ENSG00000283441 MIR499B MIR499A|hsa-mir-499b microRNA 499b ncRNA chr9-1446 chr9 137477848 137478092 + 15.0 0.000 intron (NM_001098537, intron 25 of 34) intron (NM_001098537, intron 25 of 34) -18636 NM_001130970 26012 Hs.455336 NM_015537 ENSG00000165802 NSMF HH9|NELF NMDA receptor synaptonuclear signaling and neuronal migration factor protein-coding chr19-1004 chr19 47188505 47188749 + 15.0 0.000 intron (NM_001145713, intron 6 of 6) MIR|SINE|MIR -38315 NR_036158 100422899 NR_036158 ENSG00000265134 MIR3190 mir-3190 microRNA 3190 ncRNA chr2-1204 chr2 25522208 25522452 + 15.0 0.000 intron (NM_033147, intron 9 of 19) intron (NM_033147, intron 9 of 19) 127892 NM_001256308 1838 Hs.307720 NM_021907 ENSG00000138101 DTNB - dystrobrevin beta protein-coding chr15-744 chr15 91853985 91854229 + 15.0 0.000 promoter-TSS (NR_135775) promoter-TSS (NR_135775) -197 NR_135775 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding chr16-1196 chr16 84819899 84820143 + 15.0 0.000 promoter-TSS (NM_031476) promoter-TSS (NM_031476) 36 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr18-312 chr18 21640131 21640375 + 15.0 0.000 Intergenic AluJo|SINE|Alu 23961 NM_001308257 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr10-1250 chr10 99779848 99780092 + 15.0 0.000 Intergenic L1MCa|LINE|L1 -2670 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr8-255 chr8 25193122 25193366 + 15.0 0.000 intron (NM_024940, intron 1 of 51) Tigger17a|DNA|TcMar-Tigger 8555 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding chr2-1154 chr2 217978725 217978969 + 15.0 0.000 intron (NR_135524, intron 1 of 3) CpG 140 NR_135524 105373878 Hs.630709 NR_135524 ENSG00000223923 LOC105373878 - uncharacterized LOC105373878 ncRNA chr9-432 chr9 104968531 104968775 + 15.0 0.000 Intergenic Intergenic -40498 NM_005502 19 Hs.659274 NM_005502 ENSG00000165029 ABCA1 ABC-1|ABC1|CERP|HDLDT1|TGD ATP binding cassette subfamily A member 1 protein-coding chr14-818 chr14 105066126 105066370 + 15.0 0.000 promoter-TSS (NM_013345) promoter-TSS (NM_013345) -818 NM_001278696 29933 Hs.532504 NM_013345 ENSG00000183484 GPR132 G2A G protein-coupled receptor 132 protein-coding chr10-816 chr10 34641946 34642190 + 15.0 0.000 intron (NM_001184789, intron 2 of 22) intron (NM_001184789, intron 2 of 22) 173228 NM_019619 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr12-905 chr12 121712493 121712737 + 15.0 0.000 promoter-TSS (NM_001080825) promoter-TSS (NM_001080825) -137 NM_001080825 144404 Hs.644504 NM_001080825 ENSG00000188735 TMEM120B - transmembrane protein 120B protein-coding chr7-1286 chr7 46202428 46202672 + 15.0 0.000 Intergenic Intergenic -281278 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding chr8-554 chr8 37699938 37700182 + 15.0 0.000 TTS (NM_025069) TTS (NM_025069) 4278 NM_025069 80139 Hs.288042 NM_025069 ENSG00000183779 ZNF703 NLZ1|ZEPPO1|ZNF503L|ZPO1 zinc finger protein 703 protein-coding chr8-155 chr8 32205836 32206080 + 15.0 0.000 intron (NM_013962, intron 1 of 4) AluJr|SINE|Alu 179740 NR_104156 100856811 Hs.97362 NR_104156 NRG1-IT1 - NRG1 intronic transcript 1 ncRNA chr16-573 chr16 5071867 5072111 + 15.0 0.000 promoter-TSS (NM_001330504) promoter-TSS (NM_001330504) 180 NM_019109 56052 Hs.592086 NM_019109 ENSG00000033011 ALG1 CDG1K|HMAT1|HMT-1|HMT1|MT-1|Mat-1|hMat-1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding chr2-568 chr2 187774679 187774923 + 15.0 0.000 Intergenic L1PA16|LINE|L1 -220296 NM_001032281 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr11-1091 chr11 45928158 45928402 + 15.0 0.000 exon (NM_001300721, exon 13 of 14) exon (NM_001300721, exon 13 of 14) 5624 NM_001300721 120071 Hs.86543 NM_152312 ENSG00000165905 LARGE2 GYLTL1B|PP5656 LARGE xylosyl- and glucuronyltransferase 2 protein-coding chr17-1164 chr17 66919434 66919678 + 15.0 0.000 Intergenic AluSz6|SINE|Alu -45151 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr6-824 chr6 82072909 82073153 + 15.0 0.000 intron (NR_149135, intron 1 of 3) intron (NR_149135, intron 1 of 3) 28734 NR_149135 102724168 Hs.485841 NR_149134 LINC02542 - long intergenic non-protein coding RNA 2542 ncRNA chr22-743 chr22 49725172 49725416 + 15.0 0.000 Intergenic Intergenic -67775 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding chr9-1004 chr9 134227263 134227507 + 15.0 0.000 Intergenic Intergenic -62821 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr3-1317 chr3 58175622 58175866 + 15.0 0.000 Intergenic Intergenic -5109 NR_135534 105377105 Hs.613914 NR_135534 ENSG00000244161 FLNB-AS1 - FLNB antisense RNA 1 ncRNA chr13-369 chr13 113154868 113155112 + 14.8 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -3658 NM_003891 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chr20-329 chr20 35699724 35699968 + 14.8 0.000 promoter-TSS (NM_001198989) promoter-TSS (NM_001198989) 441 NM_080748 140823 Hs.472564 NM_080748 ENSG00000125995 ROMO1 C20orf52|MTGM|MTGMP|bA353C18.2 reactive oxygen species modulator 1 protein-coding chr16-1222 chr16 87860984 87861228 + 14.8 0.000 intron (NM_003486, intron 1 of 9) intron (NM_003486, intron 1 of 9) 7210 NR_162122 113218509 NR_162122 MIR11401 - microRNA 11401 ncRNA chr13-260 chr13 100588669 100588913 + 14.8 0.000 promoter-TSS (NM_001195087) promoter-TSS (NM_001195087) 1 NM_001195087 87769 Hs.350868 NM_033110 ENSG00000134864 GGACT A2LD1 gamma-glutamylamine cyclotransferase protein-coding chr22-659 chr22 32532541 32532785 + 14.8 0.000 intron (NM_003490, intron 10 of 13) intron (NM_003490, intron 10 of 13) 57426 NM_001257990 25793 Hs.5912 NM_012179 ENSG00000100225 FBXO7 FBX|FBX07|FBX7|PARK15|PKPS F-box protein 7 protein-coding chr1-1937 chr1 228336083 228336327 + 14.8 0.000 exon (NM_001098623, exon 64 of 105) exon (NM_001098623, exon 64 of 105) 60904 NR_106800 102465444 NR_106800 ENSG00000284311 MIR6742 hsa-mir-6742 microRNA 6742 ncRNA chr12-1241 chr12 120169951 120170195 + 14.8 0.000 intron (NM_006836, intron 15 of 57) intron (NM_006836, intron 15 of 57) -14574 NR_039719 100616179 NR_039719 ENSG00000266704 MIR4498 mir-4498 microRNA 4498 ncRNA chr17-968 chr17 41722450 41722694 + 14.8 0.000 TTS (NM_177977) TTS (NM_177977) 10241 NM_000805 2520 Hs.2681 NM_000805 ENSG00000184502 GAST GAS gastrin protein-coding chr22-559 chr22 19724554 19724798 + 14.8 0.000 TTS (NM_000407) TTS (NM_000407) 1133 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr17-1422 chr17 77881581 77881825 + 14.8 0.000 non-coding (NR_028337, exon 2 of 2) non-coding (NR_028337, exon 2 of 2) 2384 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA chr6-774 chr6 4582347 4582591 + 14.8 0.000 Intergenic Intergenic -28096 NR_122107 497048 Hs.591355 NM_001011540 ENSG00000205444 KU-MEL-3 - uncharacterized LOC497048 ncRNA chr8-764 chr8 96365233 96365477 + 14.8 0.000 Intergenic MIRb|SINE|MIR 21293 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr17-962 chr17 35578370 35578614 + 14.8 0.000 promoter-TSS (NM_000286) promoter-TSS (NM_000286) 79 NM_000286 5193 Hs.591190 NM_000286 ENSG00000108733 PEX12 PAF-3|PBD3A peroxisomal biogenesis factor 12 protein-coding chr20-667 chr20 63529720 63529964 + 14.8 0.000 intron (NM_001256358, intron 6 of 6) intron (NM_001256358, intron 6 of 6) 7528 NM_001256358 5753 Hs.51133 NM_005975 ENSG00000101213 PTK6 BRK protein tyrosine kinase 6 protein-coding chr11-1118 chr11 62891335 62891579 + 14.8 0.000 Intergenic Intergenic 9758 NR_037193 6520 Hs.502769 NM_002394 ENSG00000168003 SLC3A2 4F2|4F2HC|4T2HC|CD98|CD98HC|MDU1|NACAE solute carrier family 3 member 2 protein-coding chr17-714 chr17 80432597 80432841 + 14.8 0.000 intron (NR_148042, intron 7 of 7) intron (NR_148042, intron 7 of 7) 13301 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr3-1138 chr3 81723729 81723973 + 14.8 0.000 intron (NM_000158, intron 1 of 15) intron (NM_000158, intron 1 of 15) 37794 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding chr11-1378 chr11 428486 428730 + 14.8 0.000 exon (NM_001012302, exon 13 of 23) exon (NM_001012302, exon 13 of 23) -11211 NM_021805 59307 Hs.501624 NM_021805 ENSG00000185187 SIGIRR IL-1R8|TIR8 single Ig and TIR domain containing protein-coding chr20-635 chr20 56554875 56555119 + 14.8 0.000 Intergenic Intergenic 21751 NM_001013646 388799 Hs.287759 NM_001013646 ENSG00000213714 FAM209B C20orf107|dJ1153D9.4 family with sequence similarity 209 member B protein-coding chr10-1081 chr10 3825297 3825541 + 14.8 0.000 Intergenic Intergenic -8531 NR_134490 105376365 Hs.460114 NR_134490 ENSG00000230573 LINC02639 - long intergenic non-protein coding RNA 2639 ncRNA chr2-717 chr2 2750361 2750605 + 14.8 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 375543 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr1-1683 chr1 21831024 21831268 + 14.8 0.000 intron (NM_005529, intron 84 of 96) intron (NM_005529, intron 84 of 96) 18881 NM_001013693 401944 Hs.745158 NM_001013693 ENSG00000187942 LDLRAD2 - low density lipoprotein receptor class A domain containing 2 protein-coding chr7-818 chr7 5296931 5297175 + 14.8 0.000 exon (NM_001300847, exon 7 of 11) exon (NM_001300847, exon 7 of 11) 14110 NM_001300847 222962 Hs.4302 NM_153247 ENSG00000164638 SLC29A4 ENT4|PMAT solute carrier family 29 member 4 protein-coding chr20-301 chr20 47721191 47721435 + 14.8 0.000 intron (NM_198596, intron 3 of 20) intron (NM_198596, intron 3 of 20) 64751 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding chr15-445 chr15 100903020 100903264 + 14.8 0.000 intron (NM_000693, intron 9 of 12) L1ME4b|LINE|L1 16141 NR_135828 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr1-1398 chr1 155000903 155001147 + 14.8 0.000 Intergenic CpG -1605 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr11-1085 chr11 44095487 44095731 + 14.8 0.000 promoter-TSS (NM_001178083) promoter-TSS (NM_001178083) 60 NM_207122 2132 Hs.368404 NM_000401 ENSG00000151348 EXT2 SOTV|SSMS exostosin glycosyltransferase 2 protein-coding chr12-472 chr12 56688228 56688472 + 14.8 0.000 promoter-TSS (NM_006601) promoter-TSS (NM_006601) 58 NM_001282604 10728 Hs.50425 NM_006601 ENSG00000110958 PTGES3 P23|TEBP|cPGES prostaglandin E synthase 3 protein-coding chr20-420 chr20 34561206 34561450 + 14.8 0.000 TTS (NM_032514) TTS (NM_032514) 2610 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding chr1-2106 chr1 203026592 203026836 + 14.8 0.000 intron (NM_001304331, intron 1 of 29) CpG 223 NM_001304332 8497 Hs.153648 NM_015053 ENSG00000143847 PPFIA4 - PTPRF interacting protein alpha 4 protein-coding chr3-1062 chr3 184135301 184135545 + 14.8 0.000 promoter-TSS (NM_003907) promoter-TSS (NM_003907) 65 NM_003907 8893 Hs.283551 NM_003907 ENSG00000145191 EIF2B5 CACH|CLE|EIF-2B|EIF2Bepsilon|LVWM eukaryotic translation initiation factor 2B subunit epsilon protein-coding chr4-883 chr4 1778008 1778252 + 14.8 0.000 Intergenic Intergenic -15163 NM_001354809 2261 Hs.1420 NM_000142 ENSG00000068078 FGFR3 ACH|CD333|CEK2|HSFGFR3EX|JTK4 fibroblast growth factor receptor 3 protein-coding chr12-611 chr12 6374696 6374940 + 14.8 0.000 promoter-TSS (NM_001270987) promoter-TSS (NM_001270987) -342 NM_001270987 4055 Hs.1116 NM_002342 ENSG00000111321 LTBR D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3 lymphotoxin beta receptor protein-coding chr5-648 chr5 181231144 181231388 + 14.8 0.000 intron (NM_201627, intron 2 of 7) intron (NM_201627, intron 2 of 7) 7985 NM_201627 90933 Hs.441488 NM_033549 ENSG00000146063 TRIM41 RINCK tripartite motif containing 41 protein-coding chr2-1062 chr2 8661733 8661977 + 14.8 0.000 Intergenic Intergenic 20006 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr10-1328 chr10 128018899 128019143 + 14.8 0.000 intron (NM_001323354, intron 1 of 19) intron (NM_001323354, intron 1 of 19) 20874 NM_001323354 5791 Hs.127022 NM_006504 ENSG00000132334 PTPRE HPTPE|PTPE|R-PTP-EPSILON protein tyrosine phosphatase receptor type E protein-coding chr15-585 chr15 75216064 75216308 + 14.8 0.000 Intergenic Intergenic 13504 NM_001321990 105376731 NM_001321990 LOC105376731 - taste receptor cell protein 1-like protein-coding chr19-1670 chr19 55370299 55370543 + 14.8 0.000 promoter-TSS (NM_000641) promoter-TSS (NM_000641) 42 NM_000641 3589 Hs.467304 NM_000641 ENSG00000095752 IL11 AGIF|IL-11 interleukin 11 protein-coding chr17-972 chr17 42683738 42683982 + 14.8 0.000 exon (NM_003632, exon 2 of 24) exon (NM_003632, exon 2 of 24) 1329 NM_003632 8506 Hs.408730 NM_003632 ENSG00000108797 CNTNAP1 CASPR|CHN3|CNTNAP|NRXN4|P190 contactin associated protein 1 protein-coding chr9-741 chr9 136290484 136290728 + 14.8 0.000 exon (NM_001291516, exon 6 of 10) exon (NM_001291516, exon 6 of 10) 13488 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr4-381 chr4 151015726 151015970 + 14.8 0.000 promoter-TSS (NM_001199282) promoter-TSS (NM_001199282) -121 NM_001367550 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding chr1-1344 chr1 58545382 58545626 + 14.8 0.000 intron (NM_145243, intron 1 of 8) intron (NM_145243, intron 1 of 8) 1222 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding chr1-2441 chr1 91781314 91781558 + 14.8 0.000 intron (NR_036634, intron 4 of 17) intron (NR_036634, intron 4 of 17) 104715 NM_003243 7049 Hs.482390 NM_003243 ENSG00000069702 TGFBR3 BGCAN|betaglycan transforming growth factor beta receptor 3 protein-coding chr22-674 chr22 37492986 37493230 + 14.8 0.000 intron (NM_014550, intron 16 of 19) L2b|LINE|L2 -6721 NM_001166343 4242 Hs.517603 NM_002405 ENSG00000100060 MFNG - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase protein-coding chr5-545 chr5 134632680 134632924 + 14.8 0.000 promoter-TSS (NM_016103) promoter-TSS (NM_016103) 26 NM_001033503 51128 Hs.432984 NM_016103 ENSG00000152700 SAR1B ANDD|CMRD|GTBPB|SARA2 secretion associated Ras related GTPase 1B protein-coding chr16-512 chr16 19989231 19989475 + 14.8 0.000 Intergenic AluSx3|SINE|Alu 84425 NM_001002911 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr11-1321 chr11 66085343 66085587 + 14.8 0.000 intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 15193 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding chr2-1668 chr2 37636344 37636588 + 14.8 0.000 Intergenic Intergenic 35733 NM_006449 10602 Hs.369574 NM_006449 ENSG00000163171 CDC42EP3 BORG2|CEP3|UB1 CDC42 effector protein 3 protein-coding chr10-1140 chr10 43048992 43049236 + 14.8 0.000 Intergenic Intergenic -27913 NM_020630 5979 Hs.350321 NM_000323 ENSG00000165731 RET CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1 ret proto-oncogene protein-coding chr4-792 chr4 3472637 3472881 + 14.8 0.000 intron (NM_001363811, intron 2 of 7) intron (NM_001363811, intron 2 of 7) 9453 NM_001164673 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr6-691 chr6 70667589 70667833 + 14.8 0.000 promoter-TSS (NM_001281439) promoter-TSS (NM_001281439) -172 NM_001044305 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr1-1084 chr1 169893154 169893398 + 14.8 0.000 intron (NM_181093, intron 1 of 13) intron (NM_181093, intron 1 of 13) 620 NM_020423 57147 Hs.435560 NM_020423 ENSG00000000457 SCYL3 PACE-1|PACE1 SCY1 like pseudokinase 3 protein-coding chr4-573 chr4 874584 874828 + 14.8 0.000 intron (NM_005255, intron 18 of 27) L1MEg|LINE|L1 -48577 NM_006651 10815 Hs.478930 NM_006651 ENSG00000168993 CPLX1 CPX-I|CPX1|EIEE63 complexin 1 protein-coding chr1-2424 chr1 85397818 85398062 + 14.8 0.000 intron (NM_001134445, intron 2 of 6) MSTB1|LTR|ERVL-MaLR 6566 NM_001330655 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding chr2-1538 chr2 189897958 189898202 + 14.8 0.000 Intergenic AluJb|SINE|Alu 113630 NM_001321047 5378 Hs.111749 NM_000534 ENSG00000064933 PMS1 HNPCC3|MLH2|PMSL1|hPMS1 PMS1 homolog 1, mismatch repair system component protein-coding chr7-1177 chr7 1385265 1385509 + 14.8 0.000 Intergenic Intergenic 74083 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr16-739 chr16 81315703 81315947 + 14.8 0.000 intron (NM_022041, intron 1 of 10) CpG 859 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding chr18-330 chr18 39796122 39796366 + 14.8 0.000 Intergenic MER61-int|LTR|ERV1 -44249 NR_024391 647946 Hs.649350 NR_024391 ENSG00000267374 MIR924HG LINC00669 MIR924 host gene ncRNA chr3-596 chr3 87089536 87089780 + 14.8 0.000 intron (NR_104153, intron 1 of 2) intron (NR_104153, intron 1 of 2) 378 NR_047469 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA chr5-969 chr5 493729 493973 + 14.8 0.000 intron (NM_001284351, intron 1 of 16) intron (NM_001284351, intron 1 of 16) 20615 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr9-1296 chr9 115018946 115019190 + 14.8 0.000 TTS (NM_002160) TTS (NM_002160) -88473 NM_001244 944 Hs.494901 NM_001244 ENSG00000106952 TNFSF8 CD153|CD30L|CD30LG|TNLG3A TNF superfamily member 8 protein-coding chr3-1392 chr3 123634675 123634919 + 14.8 0.000 intron (NM_001321309, intron 28 of 32) intron (NM_001321309, intron 28 of 32) -14249 NM_053031 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding chr7-674 chr7 1154080 1154324 + 14.8 0.000 intron (NR_158186, intron 4 of 4) (T)n|Simple_repeat|Simple_repeat 5994 NM_001365383 90637 Hs.648111 NM_182491 ENSG00000178381 ZFAND2A AIRAP zinc finger AN1-type containing 2A protein-coding chr14-609 chr14 23364172 23364416 + 14.8 0.000 intron (NM_005864, intron 1 of 5) intron (NM_005864, intron 1 of 5) 878 NM_005864 10278 Hs.24587 NM_005864 ENSG00000100842 EFS CAS3|CASS3|EFS1|EFS2|HEFS|SIN embryonal Fyn-associated substrate protein-coding chr6-588 chr6 17907830 17908074 + 14.8 0.000 intron (NM_001105567, intron 2 of 36) intron (NM_001105567, intron 2 of 36) 79683 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr15-423 chr15 45694861 45695105 + 14.8 0.000 Intergenic AluSz|SINE|Alu -10212 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chr11-1498 chr11 61460597 61460841 + 14.8 0.000 Intergenic Intergenic -20401 NM_001170753 220004 Hs.729003 NM_145017 ENSG00000162148 PPP1R32 C11orf66|IIIG9 protein phosphatase 1 regulatory subunit 32 protein-coding chr17-320 chr17 73311290 73311534 + 14.8 0.000 intron (NM_012121, intron 1 of 1) CpG 589 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding chr4-269 chr4 88007358 88007602 + 14.8 0.000 promoter-TSS (NM_000297) promoter-TSS (NM_000297) -155 NR_156488 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding chr5-1073 chr5 99673812 99674056 + 14.8 0.000 Intergenic L1MA8|LINE|L1 139944 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA chr14-453 chr14 103721357 103721601 + 14.8 0.000 intron (NM_024071, intron 1 of 6) intron (NM_024071, intron 1 of 6) 5735 NM_001198953 79038 Hs.592322 NM_024071 ENSG00000100711 ZFYVE21 HCVP7TP1|ZF21 zinc finger FYVE-type containing 21 protein-coding chr13-377 chr13 23909164 23909408 + 14.8 0.000 intron (NR_073430, intron 3 of 4) intron (NR_073430, intron 3 of 4) -11784 NR_104426 387911 Hs.740810 NM_001007537 ENSG00000205863 C1QTNF9B CTRP9B C1q and TNF related 9B protein-coding chr1-2418 chr1 80295945 80296189 + 14.8 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -239688 NR_125941 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA chr17-398 chr17 26882236 26882480 + 14.8 0.000 Intergenic ALR/Alpha|Satellite|centr 206883 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr6-980 chr6 43702932 43703176 + 14.8 0.000 Intergenic Intergenic -15242 NM_018135 55168 Hs.520149 NM_018135 ENSG00000096080 MRPS18A HumanS18b|MRP-S18-3|MRP-S18-a|MRPS18-3|S18bmt|S18mt-a mitochondrial ribosomal protein S18A protein-coding chr8-957 chr8 127035762 127036006 + 14.8 0.000 Intergenic Intergenic 22730 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA chr8-738 chr8 37796967 37797211 + 14.8 0.000 5' UTR (NM_032777, exon 1 of 19) 5' UTR (NM_032777, exon 1 of 19) 206 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding chr4-995 chr4 71377653 71377897 + 14.8 0.000 intron (NM_003759, intron 3 of 22) MLT1I|LTR|ERVL-MaLR 38722 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding chr17-613 chr17 40114709 40114953 + 14.8 0.000 Intergenic Intergenic -7140 NM_001365920 339287 Hs.532786 NM_001012241 ENSG00000188895 MSL1 MSL-1 MSL complex subunit 1 protein-coding chr17-1470 chr17 82065151 82065395 + 14.8 0.000 intron (NM_022156, intron 1 of 13) CpG-11940 531 NM_022156 64118 Hs.514599 NM_022156 ENSG00000169718 DUS1L DUS1|PP3111 dihydrouridine synthase 1 like protein-coding chr3-1322 chr3 58994820 58995064 + 14.8 0.000 intron (NR_147235, intron 4 of 6) intron (NR_147235, intron 4 of 6) 55083 NM_001351531 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding chr1-1865 chr1 168136469 168136713 + 14.8 0.000 promoter-TSS (NM_001267612) promoter-TSS (NM_001267612) 116 NM_001267613 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr14-394 chr14 21526278 21526522 + 14.8 0.000 promoter-TSS (NR_111967) promoter-TSS (NR_111967) 8 NR_111967 6297 Hs.416358 NM_005407 ENSG00000165821 SALL2 COLB|HSAL2|Sal-2|ZNF795|p150(Sal2) spalt like transcription factor 2 protein-coding chr3-1432 chr3 141656851 141657095 + 14.8 0.000 Intergenic Intergenic -6226 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA chr22-703 chr22 40681044 40681288 + 14.8 0.000 exon (NM_005297, exon 2 of 2) exon (NM_005297, exon 2 of 2) 1988 NM_005297 2847 Hs.248122 NM_005297 ENSG00000128285 MCHR1 GPR24|MCH-1R|MCH1R|SLC-1|SLC1 melanin concentrating hormone receptor 1 protein-coding chr10-1333 chr10 130416483 130416727 + 14.8 0.000 Intergenic Intergenic 280196 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr2-1194 chr2 11584246 11584490 + 14.8 0.000 intron (NM_014668, intron 7 of 32) intron (NM_014668, intron 7 of 32) 41682 NM_033090 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr21-216 chr21 44801620 44801864 + 14.8 0.000 promoter-TSS (NM_001202489) promoter-TSS (NM_001202489) 78 NM_182688 7327 Hs.529420 NM_003343 ENSG00000184787 UBE2G2 UBC7 ubiquitin conjugating enzyme E2 G2 protein-coding chr5-1123 chr5 137040731 137040975 + 14.8 0.000 intron (NM_004598, intron 6 of 10) intron (NM_004598, intron 6 of 10) -87344 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA chr6-628 chr6 146546633 146546877 + 14.8 0.000 intron (NM_006834, intron 1 of 2) intron (NM_006834, intron 1 of 2) 2922 NM_006834 10981 Hs.287714 NM_006834 ENSG00000118508 RAB32 - RAB32, member RAS oncogene family protein-coding chr1-848 chr1 76074818 76075062 + 14.8 0.000 intron (NM_001349108, intron 1 of 3) intron (NM_001349108, intron 1 of 3) 194 NR_146056 256435 Hs.337040 NM_152996 ENSG00000184005 ST6GALNAC3 PRO7177|SIAT7C|ST6GALNACIII|STY ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding chr1-2519 chr1 155187286 155187530 + 14.8 0.000 intron (NM_001044391, intron 3 of 4) intron (NM_001044391, intron 3 of 4) 5501 NM_002456 4582 Hs.89603 NM_002456 ENSG00000185499 MUC1 ADMCKD|ADMCKD1|CA 15-3|CD227|EMA|H23AG|KL-6|MAM6|MCD|MCKD|MCKD1|MUC-1|MUC-1/SEC|MUC-1/X|MUC1/ZD|PEM|PEMT|PUM mucin 1, cell surface associated protein-coding chr16-1209 chr16 85765951 85766195 + 14.8 0.000 Intergenic Intergenic -14977 NR_161452 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding GL000194.1-1 GL000194.1 56052 56296 + 14.8 0.000 NA NA NA NA chr13-220 chr13 99356970 99357214 + 14.8 0.000 TTS (NR_030353) TTS (NR_030353) 961 NR_030353 693208 NR_030353 ENSG00000207719 MIR623 MIRN623|hsa-mir-623 microRNA 623 ncRNA chr6-374 chr6 10942580 10942824 + 14.8 0.000 exon (NM_001040274, exon 23 of 30) exon (NM_001040274, exon 23 of 30) 11387 NR_125851 101928191 Hs.638939 NR_125851 LOC101928191 - uncharacterized LOC101928191 ncRNA chr2-1028 chr2 216643961 216644205 + 14.8 0.000 intron (NM_000597, intron 1 of 3) intron (NM_000597, intron 1 of 3) 10663 NM_000597 3485 Hs.438102 NM_000597 ENSG00000115457 IGFBP2 IBP2|IGF-BP53 insulin like growth factor binding protein 2 protein-coding chr17-404 chr17 31558933 31559177 + 14.8 0.000 promoter-TSS (NR_029710) promoter-TSS (NR_029710) -941 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr10-814 chr10 32951588 32951832 + 14.8 0.000 intron (NM_002211, intron 1 of 15) Tigger19b|DNA|TcMar-Tigger 6184 NM_133376 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr16-1197 chr16 84820436 84820680 + 14.8 0.000 intron (NM_031476, intron 1 of 14) intron (NM_031476, intron 1 of 14) 573 NM_031476 83716 Hs.513779 NM_031476 ENSG00000103196 CRISPLD2 CRISP11|LCRISP2|LGL1 cysteine rich secretory protein LCCL domain containing 2 protein-coding chr17-1376 chr17 63930627 63930871 + 14.8 0.000 intron (NM_000626, intron 2 of 5) intron (NM_000626, intron 2 of 5) 1582 NM_001329050 974 Hs.89575 NM_000626 ENSG00000007312 CD79B AGM6|B29|IGB CD79b molecule protein-coding chr22-609 chr22 18076144 18076388 + 14.8 0.000 Intergenic Intergenic -1654 NM_001199319 55670 Hs.517400 NM_017929 ENSG00000215193 PEX26 PBD7A|PBD7B|PEX26M1T|Pex26pM1T peroxisomal biogenesis factor 26 protein-coding chr9-1182 chr9 20205603 20205847 + 14.8 0.000 Intergenic Charlie1|DNA|hAT-Charlie 205513 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA chr3-1386 chr3 122101968 122102212 + 14.8 0.000 intron (NM_001206924, intron 2 of 5) intron (NM_001206924, intron 2 of 5) 24241 NM_006889 942 Hs.171182 NM_006889 ENSG00000114013 CD86 B7-2|B7.2|B70|CD28LG2|LAB72 CD86 molecule protein-coding chr2-1998 chr2 241216509 241216753 + 14.8 0.000 intron (NM_001370694, intron 19 of 24) intron (NM_001370694, intron 19 of 24) 27954 NM_001370694 50636 Hs.163909 NM_001001666 ENSG00000146205 ANO7 D-TMPP|DTMPP|IPCA-5|IPCA5|NGEP|PCANAP5|PCANAP5L|TMEM16G anoctamin 7 protein-coding chr2-1602 chr2 8656441 8656685 + 14.8 0.000 Intergenic Intergenic 25298 NR_110153 100506299 Hs.439031 NR_110153 ENSG00000235092 ID2-AS1 - ID2 antisense RNA 1 ncRNA chr8-569 chr8 73081030 73081274 + 14.8 0.000 exon (NM_153225, exon 2 of 5) exon (NM_153225, exon 2 of 5) 12020 NM_153225 157869 Hs.439040 NM_153225 ENSG00000164764 SBSPON C8orf84|RPESP somatomedin B and thrombospondin type 1 domain containing protein-coding chr20-291 chr20 19974630 19974874 + 14.8 0.000 exon (NM_018993, exon 7 of 11) exon (NM_018993, exon 7 of 11) -42538 NM_181528 51126 Hs.368783 NM_016100 ENSG00000173418 NAA20 NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1 N(alpha)-acetyltransferase 20, NatB catalytic subunit protein-coding chr19-1521 chr19 12874158 12874402 + 14.8 0.000 TTS (NM_001375) TTS (NM_001375) 7169 NM_001375 1777 Hs.118243 NM_001375 ENSG00000105612 DNASE2 DNASE2A|DNL|DNL2 deoxyribonuclease 2, lysosomal protein-coding chr16-1133 chr16 58011740 58011984 + 14.8 0.000 3' UTR (NM_001204911, exon 4 of 4) 3' UTR (NM_001204911, exon 4 of 4) 10455 NM_001195302 79650 Hs.408702 NM_024598 ENSG00000103005 USB1 C16orf57|HVSL1|Mpn1|PN|hUsb1 U6 snRNA biogenesis phosphodiesterase 1 protein-coding chr1-2286 chr1 21665751 21665995 + 14.8 0.000 intron (NM_001145657, intron 1 of 26) intron (NM_001145657, intron 1 of 26) 3484 NM_001350524 5909 Hs.148178 NM_002885 ENSG00000076864 RAP1GAP RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP RAP1 GTPase activating protein protein-coding chr1-2267 chr1 18966015 18966259 + 14.8 0.000 Intergenic Intergenic -9461 NM_001136265 126917 Hs.466625 NM_001136265 ENSG00000169991 IFFO2 - intermediate filament family orphan 2 protein-coding chr17-1437 chr17 80421695 80421939 + 14.8 0.000 intron (NR_148042, intron 2 of 7) intron (NR_148042, intron 2 of 7) 2399 NR_039883 100616359 NR_039883 ENSG00000264961 MIR4730 - microRNA 4730 ncRNA chr7-1264 chr7 38354345 38354589 + 14.8 0.000 intron (NR_040085, intron 3 of 3) intron (NR_040085, intron 3 of 3) 12890 NR_040085 100506776 Hs.173034 NR_040085 ENSG00000281103 TRG-AS1 TCRGV T cell receptor gamma locus antisense RNA 1 ncRNA chrX-436 chrX 34162930 34163174 + 14.8 0.000 Intergenic L1M3e|LINE|L1 -30722 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding chr14-668 chr14 101705933 101706177 + 14.8 0.000 Intergenic CpG -24382 NR_026774 145200 Hs.150840 NR_026774 ENSG00000258512 LINC00239 C14orf72|NCRNA00239 long intergenic non-protein coding RNA 239 ncRNA chr8-943 chr8 114904175 114904419 + 14.8 0.000 Intergenic LTR16A2|LTR|ERVL 763716 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding chr22-500 chr22 38081250 38081494 + 14.8 0.000 exon (NM_013356, exon 4 of 5) exon (NM_013356, exon 4 of 5) 1791 NM_013356 23539 Hs.745256 NM_013356 ENSG00000100156 SLC16A8 MCT3|REMP solute carrier family 16 member 8 protein-coding chr20-393 chr20 324414 324658 + 14.8 0.000 intron (NR_109990, intron 1 of 2) CpG 716 NR_109990 100507459 Hs.659689 NR_109990 NRSN2-AS1 - NRSN2 antisense RNA 1 ncRNA chr9-1198 chr9 36566677 36566921 + 14.8 0.000 Intergenic Intergenic -6063 NM_001256689 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr16-179 chr16 85751008 85751252 + 14.8 0.000 promoter-TSS (NM_206967) promoter-TSS (NM_206967) -34 NR_161452 404550 Hs.461655 NM_206967 ENSG00000154102 C16orf74 - chromosome 16 open reading frame 74 protein-coding chr19-1238 chr19 37719234 37719478 + 14.8 0.000 promoter-TSS (NM_001172677) promoter-TSS (NM_001172677) -168 NM_001172677 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding chr13-129 chr13 31846449 31846693 + 14.8 0.000 promoter-TSS (NR_027062) promoter-TSS (NR_027062) -212 NR_027062 196549 Hs.507667 NM_145293 EEF1DP3 - eukaryotic translation elongation factor 1 delta pseudogene 3 pseudo chr5-1063 chr5 78677903 78678147 + 14.7 0.000 Intergenic Intergenic -29253 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr7-1446 chr7 153099277 153099521 + 14.7 0.000 Intergenic Intergenic 312835 NR_125776 103724390 Hs.614280 NR_125776 ENSG00000234722 LINC01287 TCONS_l2_00027522 long intergenic non-protein coding RNA 1287 ncRNA chr20-607 chr20 44745879 44746123 + 14.7 0.000 exon (NM_022358, exon 1 of 2) exon (NM_022358, exon 1 of 2) 136 NM_022358 60598 Hs.528664 NM_022358 ENSG00000124249 KCNK15 K2p15.1|KCNK11|KCNK14|KT3.3|TASK-5|TASK5|dJ781B1.1 potassium two pore domain channel subfamily K member 15 protein-coding chr4-787 chr4 2046577 2046821 + 14.7 0.000 Intergenic Intergenic 4704 NM_001141936 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chrX-353 chrX 154478810 154479054 + 14.7 0.000 5' UTR (NM_006014, exon 1 of 3) 5' UTR (NM_006014, exon 1 of 3) 325 NM_006014 8270 Hs.444619 NM_006014 ENSG00000196976 LAGE3 CVG5|DXS9879E|DXS9951E|ESO3|GAMOS2|ITBA2|Pcc1 L antigen family member 3 protein-coding chr5-894 chr5 76806145 76806389 + 14.7 0.000 Intergenic LTR64|LTR|ERV1 -12763 NM_005242 2150 Hs.744181 NM_005242 ENSG00000164251 F2RL1 GPR11|PAR2 F2R like trypsin receptor 1 protein-coding chr1-1849 chr1 156728641 156728885 + 14.7 0.000 promoter-TSS (NM_001303095) promoter-TSS (NM_001303095) 3 NM_001370151 81875 Hs.301904 NM_030980 ENSG00000143319 ISG20L2 HSD38 interferon stimulated exonuclease gene 20 like 2 protein-coding chr18-351 chr18 59716030 59716274 + 14.7 0.000 Intergenic Intergenic -18729 NM_133459 147372 Hs.34333 NM_133459 ENSG00000183287 CCBE1 HKLLS1 collagen and calcium binding EGF domains 1 protein-coding chr4-1073 chr4 140654062 140654306 + 14.7 0.000 intron (NM_015130, intron 13 of 20) LTR10D|LTR|ERV1 -11104 NR_077215 644962 Hs.676500 NR_077215 TNRC18P1 - trinucleotide repeat containing 18 pseudogene 1 pseudo chr1-1236 chr1 1025981 1026225 + 14.7 0.000 intron (NM_198576, intron 2 of 35) intron (NM_198576, intron 2 of 35) 5983 NM_001305275 375790 Hs.273330 NM_198576 ENSG00000188157 AGRN AGRIN|CMS8|CMSPPD agrin protein-coding chr1-2023 chr1 36857628 36857872 + 14.7 0.000 intron (NM_000831, intron 7 of 15) intron (NM_000831, intron 7 of 15) 176765 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr19-1557 chr19 19032566 19032810 + 14.7 0.000 promoter-TSS (NM_033415) promoter-TSS (NM_033415) 829 NR_147914 10147 Hs.77876 NM_014884 ENSG00000064607 SUGP2 SFRS14|SRFS14 SURP and G-patch domain containing 2 protein-coding chr19-1073 chr19 12672114 12672358 + 14.7 0.000 TTS (NR_161468) TTS (NR_161468) 2483 NM_032332 84292 Hs.657204 NM_032332 ENSG00000123154 WDR83 MORG1 WD repeat domain 83 protein-coding chr7-353 chr7 116862717 116862961 + 14.7 0.000 intron (NM_006136, intron 1 of 9) CpG 252 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr1-1638 chr1 6125219 6125463 + 14.7 0.000 intron (NM_015557, intron 28 of 41) intron (NM_015557, intron 28 of 41) 54980 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr3-632 chr3 185825067 185825311 + 14.7 0.000 promoter-TSS (NM_006548) promoter-TSS (NM_006548) -147 NR_138486 10644 Hs.35354 NM_006548 ENSG00000073792 IGF2BP2 IMP-2|IMP2|VICKZ2 insulin like growth factor 2 mRNA binding protein 2 protein-coding chr9-763 chr9 5608878 5609122 + 14.7 0.000 Intergenic MLT2F|LTR|ERVL -20107 NM_020829 57589 Hs.211520 NM_020829 ENSG00000107036 RIC1 CIP150|KIAA1432|bA207C16.1 RIC1 homolog, RAB6A GEF complex partner 1 protein-coding chr4-589 chr4 16898425 16898669 + 14.7 0.000 promoter-TSS (NM_001290) promoter-TSS (NM_001290) 98 NM_001290 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr14-452 chr14 103698192 103698436 + 14.7 0.000 3' UTR (NM_001100118, exon 9 of 9) 3' UTR (NM_001100118, exon 9 of 9) 17137 NM_001371231 chr14-604 chr14 105456794 105457038 + 14.7 0.000 intron (NM_001203258, intron 7 of 20) intron (NM_001203258, intron 7 of 20) -16029 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr17-582 chr17 2270957 2271201 + 14.7 0.000 intron (NM_017575, intron 8 of 18) FLAM_C|SINE|Alu -4894 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr3-1441 chr3 148227468 148227712 + 14.7 0.000 Intergenic MLT1H2|LTR|ERVL-MaLR -53301 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA chr5-795 chr5 138032838 138033082 + 14.7 0.000 5' UTR (NM_016603, exon 1 of 23) 5' UTR (NM_016603, exon 1 of 23) 153 NM_016603 51306 Hs.567453 NM_016603 ENSG00000031003 FAM13B ARHGAP49|C5orf5|FAM13B1|KHCHP|N61 family with sequence similarity 13 member B protein-coding chr14-502 chr14 21069541 21069785 + 14.7 0.000 promoter-TSS (NM_001278529) promoter-TSS (NM_001278529) -641 NM_018071 55701 Hs.35125 NM_018071 ENSG00000165801 ARHGEF40 SOLO Rho guanine nucleotide exchange factor 40 protein-coding chr10-1279 chr10 111084629 111084873 + 14.7 0.000 Intergenic Intergenic 7722 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding chr5-822 chr5 151115398 151115642 + 14.7 0.000 intron (NM_001193544, intron 19 of 24) intron (NM_001193544, intron 19 of 24) 26164 NM_001193544 309 Hs.412117 NM_001155 ENSG00000197043 ANXA6 ANX6|CBP68|CPB-II|p68|p70 annexin A6 protein-coding chr17-893 chr17 79393925 79394169 + 14.7 0.000 intron (NM_001082575, intron 2 of 14) intron (NM_001082575, intron 2 of 14) 122101 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding GL000225.1-60 GL000225.1 114120 114364 + 14.7 0.000 NA NA NA NA chr10-563 chr10 133313272 133313516 + 14.7 0.000 TTS (NM_145806) TTS (NM_145806) -1057 NR_046330 10844 Hs.523370 NM_006659 ENSG00000130640 TUBGCP2 ALP4|GCP-2|GCP2|Grip103|SPBC97|SPC97|Spc97p|h103p|hGCP2|hSpc97 tubulin gamma complex associated protein 2 protein-coding chr7-906 chr7 6159828 6160072 + 14.7 0.000 intron (NM_032172, intron 17 of 17) intron (NM_032172, intron 17 of 17) 12187 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding chr11-1358 chr11 119112665 119112909 + 14.7 0.000 exon (NM_001290474, exon 10 of 14) exon (NM_001290474, exon 10 of 14) 5443 NM_014807 9854 Hs.26899 NM_014807 ENSG00000172375 C2CD2L DLNB23|TMEM24 C2CD2 like protein-coding chr8-721 chr8 6406336 6406580 + 14.7 0.000 promoter-TSS (NM_001363979) promoter-TSS (NM_001363979) 90 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA chr9-668 chr9 93133646 93133890 + 14.7 0.000 intron (NM_004148, intron 1 of 3) CpG 483 NM_004148 4814 Hs.494457 NM_004148 ENSG00000131669 NINJ1 NIN1|NINJURIN ninjurin 1 protein-coding chr12-412 chr12 51269711 51269955 + 14.7 0.000 intron (NM_001031628, intron 1 of 3) CpG 377 NM_001033873 57228 Hs.652389 NM_001031628 ENSG00000170545 SMAGP hSMAGP small cell adhesion glycoprotein protein-coding chr19-986 chr19 40226210 40226454 + 14.7 0.000 intron (NM_024877, intron 1 of 4) CpG 357 NM_024877 79935 Hs.631603 NM_024877 ENSG00000105219 CNTD2 CCNP cyclin N-terminal domain containing 2 protein-coding chr8-919 chr8 96732148 96732392 + 14.7 0.000 intron (NM_016134, intron 1 of 7) intron (NM_016134, intron 1 of 7) 87028 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding chr11-1431 chr11 17973043 17973287 + 14.7 0.000 intron (NR_104040, intron 8 of 11) intron (NR_104040, intron 8 of 11) 39882 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr2-1596 chr2 3188581 3188825 + 14.7 0.000 TTS (NM_001330530) TTS (NM_001330530) -62677 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr15-434 chr15 72231551 72231795 + 14.7 0.000 promoter-TSS (NM_001316318) promoter-TSS (NM_001316318) -49 NM_001206798 5315 Hs.534770 NM_002654 ENSG00000067225 PKM CTHBP|HEL-S-30|OIP3|PK3|PKM2|TCB|THBP1 pyruvate kinase M1/2 protein-coding chr10-554 chr10 121974486 121974730 + 14.7 0.000 intron (NM_001167865, intron 1 of 10) CpG 609 NM_001167865 54780 Hs.258798 NM_017615 ENSG00000107672 NSMCE4A C10orf86|NS4EA|NSE4A NSE4 homolog A, SMC5-SMC6 complex component protein-coding chr5-748 chr5 57137050 57137294 + 14.7 0.000 Intergenic AluSx|SINE|Alu -36776 NM_001203246 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding chr7-795 chr7 149147184 149147428 + 14.7 0.000 promoter-TSS (NM_170686) promoter-TSS (NM_170686) -147 NM_170686 57541 Hs.632032 NM_020781 ENSG00000197024 ZNF398 P51|P71|ZER6 zinc finger protein 398 protein-coding chr4-443 chr4 667505 667749 + 14.7 0.000 intron (NM_000283, intron 20 of 21) intron (NM_000283, intron 20 of 21) 6649 NR_033743 521 Hs.85539 NM_007100 ENSG00000169020 ATP5ME ATP5I|ATP5K ATP synthase membrane subunit e protein-coding chr17-409 chr17 44222492 44222736 + 14.7 0.000 Intergenic Intergenic -1310 NR_045058 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF CONDBA|NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor protein-coding chr9-1053 chr9 706703 706947 + 14.7 0.000 non-coding (NR_148869, exon 1 of 11) non-coding (NR_148869, exon 1 of 11) 148 NR_148869 23189 Hs.306764 NM_015158 ENSG00000107104 KANK1 ANKRD15|CPSQ2|KANK KN motif and ankyrin repeat domains 1 protein-coding chr16-742 chr16 85112303 85112547 + 14.7 0.000 promoter-TSS (NM_198491) promoter-TSS (NM_198491) 47 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr10-768 chr10 133279937 133280181 + 14.7 0.000 intron (NM_001256617, intron 18 of 18) intron (NM_001256617, intron 18 of 18) -3191 NM_001164490 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding chr17-1062 chr17 80262758 80263002 + 14.7 0.000 intron (NM_020954, intron 1 of 16) intron (NM_020954, intron 1 of 16) 2028 NM_020954 57674 Hs.195642 NM_020914 ENSG00000173821 RNF213 ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 ring finger protein 213 protein-coding chr4-363 chr4 2756511 2756755 + 14.7 0.000 promoter-TSS (NM_024309) promoter-TSS (NM_024309) -297 NM_024309 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chrX-182 chrX 115337828 115338072 + 14.7 0.000 Intergenic Intergenic 48235 NM_001318840 51213 Hs.242183 NM_016383 ENSG00000102021 LUZP4 CT-28|CT-8|CT28|HOM-TES-85 leucine zipper protein 4 protein-coding chr9-1318 chr9 124479522 124479766 + 14.7 0.000 Intergenic Intergenic 27755 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr15-73 chr15 79437687 79437931 + 14.7 0.000 intron (NM_015206, intron 1 of 3) intron (NM_015206, intron 1 of 3) 5293 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding chr1-1723 chr1 34859678 34859922 + 14.7 0.000 promoter-TSS (NM_001164824) promoter-TSS (NM_001164824) -51 NM_001320261 113444 Hs.27160 NM_138428 ENSG00000163866 SMIM12 C1orf212 small integral membrane protein 12 protein-coding chr12-942 chr12 21472137 21472381 + 14.7 0.000 intron (NM_002907, intron 12 of 14) intron (NM_002907, intron 12 of 14) 29376 NM_002907 5965 Hs.235069 NM_002907 ENSG00000004700 RECQL RECQL1|RecQ1 RecQ like helicase protein-coding chr20-554 chr20 23245794 23246038 + 14.7 0.000 Intergenic LTR16C|LTR|ERVL -104875 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr17-803 chr17 76469119 76469363 + 14.7 0.000 exon (NM_001166579, exon 6 of 7) exon (NM_001166579, exon 6 of 7) 1638 NM_001088 15 Hs.431417 NM_001088 ENSG00000129673 AANAT DSPS|SNAT aralkylamine N-acetyltransferase protein-coding chr4-862 chr4 185425654 185425898 + 14.7 0.000 intron (NM_018359, intron 1 of 11) CpG 188 NM_018359 55325 Hs.713548 NM_018359 ENSG00000109775 UFSP2 BHD|C4orf20|SEMDDR UFM1 specific peptidase 2 protein-coding chr2-358 chr2 241115470 241115714 + 14.7 0.000 intron (NM_015148, intron 12 of 17) intron (NM_015148, intron 12 of 17) -13260 NR_028049 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr9-935 chr9 109600229 109600473 + 14.7 0.000 Intergenic LTR33|LTR|ERVL -40437 NM_001037293 445815 Hs.591908 NM_007203 ENSG00000157654 PALM2-AKAP2 AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 PALM2-AKAP2 fusion protein-coding chr12-1088 chr12 47781562 47781806 + 14.7 0.000 3' UTR (NM_017842, exon 3 of 3) 3' UTR (NM_017842, exon 3 of 3) 8446 NM_017842 55652 Hs.438867 NM_017842 ENSG00000211584 SLC48A1 HRG-1|HRG1|hHRG-1 solute carrier family 48 member 1 protein-coding chr8-610 chr8 26661643 26661887 + 14.7 0.000 Intergenic Intergenic 83360 NM_001244604 1808 Hs.593187 NM_001386 ENSG00000092964 DPYSL2 CRMP-2|CRMP2|DHPRP2|DRP-2|DRP2|N2A3|ULIP-2|ULIP2 dihydropyrimidinase like 2 protein-coding chr14-329 chr14 73830215 73830459 + 14.7 0.000 promoter-TSS (NR_135238) promoter-TSS (NR_135238) -202 NR_135238 100506498 Hs.569330 NR_135238 ENSG00000258586 LINC02274 - long intergenic non-protein coding RNA 2274 ncRNA chr13-523 chr13 106104392 106104636 + 14.7 0.000 Intergenic Intergenic -272050 NR_163477 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA chr1-1747 chr1 44245088 44245332 + 14.7 0.000 promoter-TSS (NR_110056) promoter-TSS (NR_110056) -927 NR_046817 100874278 Hs.132497 NR_046817 ENSG00000233602 ERI3-IT1 - ERI3 intronic transcript 1 ncRNA chr3-928 chr3 15276036 15276280 + 14.7 0.000 intron (NM_001018009, intron 3 of 8) intron (NM_001018009, intron 3 of 8) 21974 NR_046084 100505696 Hs.745026 NR_046084 ENSG00000224660 SH3BP5-AS1 - SH3BP5 antisense RNA 1 ncRNA chr6-811 chr6 53250603 53250847 + 14.7 0.000 Intergenic Intergenic -26268 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA chr7-1448 chr7 155002391 155002635 + 14.7 0.000 promoter-TSS (NR_028090) promoter-TSS (NR_028090) 611 NM_007349 22976 Hs.443881 NM_007349 ENSG00000157212 PAXIP1 CAGF28|CAGF29|PACIP1|PAXIP1L|PTIP|TNRC2 PAX interacting protein 1 protein-coding chr16-905 chr16 200534 200778 + 14.7 0.000 intron (NM_001330420, intron 5 of 9) AluJo|SINE|Alu 20197 NM_005331 3049 Hs.247921 NM_005331 ENSG00000086506 HBQ1 HBQ hemoglobin subunit theta 1 protein-coding chr15-666 chr15 63596809 63597053 + 14.7 0.000 promoter-TSS (NM_001367809) promoter-TSS (NM_001367809) -456 NM_001367807 283807 Hs.631163 NM_203373 ENSG00000197361 FBXL22 Fbl22 F-box and leucine rich repeat protein 22 protein-coding chr3-1092 chr3 9500967 9501211 + 14.7 0.000 3' UTR (NM_198560, exon 4 of 4) 3' UTR (NM_198560, exon 4 of 4) 52733 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr17-557 chr17 62627656 62627900 + 14.7 0.000 5' UTR (NM_006039, exon 1 of 30) 5' UTR (NM_006039, exon 1 of 30) 108 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr16-278 chr16 34063010 34063254 + 14.7 0.000 Intergenic Intergenic -100446 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr5-519 chr5 321959 322203 + 14.7 0.000 intron (NM_020731, intron 1 of 11) CpG 17905 NM_020731 57491 Hs.50823 NM_020731 ENSG00000286169 AHRR AHH|AHHR|bHLHe77 aryl-hydrocarbon receptor repressor protein-coding chr11-1150 chr11 66727625 66727869 + 14.7 0.000 Intergenic CpG -6348 NM_006946 6712 Hs.26915 NM_006946 ENSG00000173898 SPTBN2 GTRAP41|SCA5|SCAR14 spectrin beta, non-erythrocytic 2 protein-coding chr15-745 chr15 94750442 94750686 + 14.7 0.000 Intergenic Intergenic -104799 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo chr12-605 chr12 189000 189244 + 14.7 0.000 TTS (NM_001122847) TTS (NM_001122847) -14523 NR_120475 101929384 Hs.569138 NR_120475 ENSG00000256577 LOC101929384 - uncharacterized LOC101929384 ncRNA chr7-691 chr7 5379403 5379647 + 14.7 0.000 intron (NM_001080495, intron 5 of 29) intron (NM_001080495, intron 5 of 29) 44021 NM_001080495 84629 Hs.520638 NM_001013722 ENSG00000182095 TNRC18 CAGL79|TNRC18A trinucleotide repeat containing 18 protein-coding chr19-1224 chr19 19821428 19821672 + 14.7 0.000 intron (NM_001099269, intron 1 of 3) intron (NM_001099269, intron 1 of 3) 200 NM_001099269 440515 Hs.351906 NM_001099269 ENSG00000081665 ZNF506 - zinc finger protein 506 protein-coding chr15-719 chr15 80591571 80591815 + 14.7 0.000 exon (NM_014862, exon 18 of 19) exon (NM_014862, exon 18 of 19) 10590 NR_049837 100847042 NR_049837 ENSG00000284059 MIR5572 - microRNA 5572 ncRNA chr16-1177 chr16 75764230 75764474 + 14.7 0.000 Intergenic Intergenic -37862 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding chr9-1338 chr9 127878446 127878690 + 14.7 0.000 promoter-TSS (NM_000476) promoter-TSS (NM_000476) -825 NM_000476 203 Hs.175473 NM_000476 ENSG00000106992 AK1 HTL-S-58j adenylate kinase 1 protein-coding chr8-805 chr8 17465321 17465565 + 14.7 0.000 Intergenic MER121|DNA|hAT? -31645 NM_001008539 6542 Hs.448520 NM_003046 ENSG00000003989 SLC7A2 ATRC2|CAT2|HCAT2 solute carrier family 7 member 2 protein-coding chr17-1095 chr17 1216318 1216562 + 14.7 0.000 intron (NM_001322841, intron 1 of 22) intron (NM_001322841, intron 1 of 22) 13282 NM_001322842 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr6-945 chr6 34091360 34091604 + 14.7 0.000 intron (NM_001282847, intron 2 of 9) intron (NM_001282847, intron 2 of 9) 14485 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr12-968 chr12 55738407 55738651 + 14.7 0.000 Intergenic Intergenic -4593 NM_005811 10220 Hs.600883 NM_005811 ENSG00000135414 GDF11 BMP-11|BMP11 growth differentiation factor 11 protein-coding chr11-301 chr11 124673754 124673998 + 14.7 0.000 promoter-TSS (NM_170601) promoter-TSS (NM_170601) 32 NM_017425 53340 Hs.286233 NM_017425 ENSG00000064199 SPA17 CT22|SP17|SP17-1 sperm autoantigenic protein 17 protein-coding chr19-1260 chr19 44748614 44748858 + 14.7 0.000 promoter-TSS (NM_005178) promoter-TSS (NM_005178) 28 NM_005178 602 Hs.31210 NM_005178 ENSG00000069399 BCL3 BCL4|D19S37 BCL3 transcription coactivator protein-coding chr3-1502 chr3 195196312 195196556 + 14.7 0.000 intron (NM_152531, intron 2 of 3) intron (NM_152531, intron 2 of 3) 48563 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA chr9-1217 chr9 71793801 71794045 + 14.7 0.000 Intergenic Intergenic -25410 NM_001349784 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr22-419 chr22 47003350 47003594 + 14.7 0.000 intron (NM_001284305, intron 10 of 12) intron (NM_001284305, intron 10 of 12) -87430 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr17-1254 chr17 16521291 16521535 + 14.7 0.000 Intergenic Intergenic -29220 NM_207387 388341 Hs.25425 NM_207387 ENSG00000181350 LRRC75A C17orf76|FAM211A leucine rich repeat containing 75A protein-coding chr6-388 chr6 35727953 35728197 + 14.7 0.000 intron (NR_027117, intron 9 of 9) CpG 508 NM_001145775 2289 Hs.407190 NM_004117 ENSG00000096060 FKBP5 AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 FKBP prolyl isomerase 5 protein-coding chr13-248 chr13 52405969 52406213 + 14.7 0.000 promoter-TSS (NM_199263) promoter-TSS (NM_199263) 81 NM_018676 55901 Hs.325667 NM_018676 ENSG00000136114 THSD1 TMTSP|UNQ3010 thrombospondin type 1 domain containing 1 protein-coding chr1-1180 chr1 95139012 95139256 + 14.7 0.000 intron (NM_001199691, intron 1 of 7) AluJr|SINE|Alu 21211 NM_001199691 100527978 Hs.483512 NM_001199691 ENSG00000271092 TLCD4-RWDD3 TMEM56-RWDD3 TLCD4-RWDD3 readthrough protein-coding chr11-552 chr11 8732402 8732646 + 14.7 0.000 intron (NM_005418, intron 5 of 22) intron (NM_005418, intron 5 of 22) -36254 NR_120590 102724784 Hs.613276 NR_120590 LOC102724784 - uncharacterized LOC102724784 ncRNA chr19-1046 chr19 2302612 2302856 + 14.7 0.000 intron (NM_001101391, intron 1 of 1) CpG 5420 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr1-2605 chr1 201972772 201973016 + 14.5 0.000 Intergenic AluJb|SINE|Alu -5567 NR_145769 109616993 NR_145769 ENSG00000206637 SNORA70H - small nucleolar RNA, H/ACA box 70H snoRNA chr15-163 chr15 51267120 51267364 + 14.5 0.000 intron (NM_000103, intron 1 of 9) intron (NM_000103, intron 1 of 9) 10900 NM_001347252 1588 Hs.260074 NM_000103 ENSG00000137869 CYP19A1 ARO|ARO1|CPV1|CYAR|CYP19|CYPXIX|P-450AROM cytochrome P450 family 19 subfamily A member 1 protein-coding chr2-960 chr2 86828924 86829168 + 14.5 0.000 intron (NM_172101, intron 5 of 6) intron (NM_172101, intron 5 of 6) -20650 NM_001145873 925 Hs.85258 NM_001768 ENSG00000153563 CD8A CD8|Leu2|p32 CD8a molecule protein-coding chr7-1404 chr7 128884652 128884896 + 14.5 0.000 intron (NM_001366122, intron 28 of 39) intron (NM_001366122, intron 28 of 39) 18444 NM_001195150 100130705 Hs.641532 NM_001195150 ENSG00000272899 ATP6V1FNB - ATP6V1F neighbor protein-coding chr11-1199 chr11 102109865 102110109 + 14.5 0.000 promoter-TSS (NM_001282098) promoter-TSS (NM_001282098) -460 NM_001130145 10413 Hs.503692 NM_006106 ENSG00000137693 YAP1 COB1|YAP|YAP2|YAP65|YKI Yes associated protein 1 protein-coding chr1-1627 chr1 3069074 3069318 + 14.5 0.000 promoter-TSS (NM_199454) promoter-TSS (NM_199454) -7 NM_199454 63976 Hs.99500 NM_022114 ENSG00000142611 PRDM16 CMD1LL|KMT8F|LVNC8|MEL1|PFM13 PR/SET domain 16 protein-coding chr16-959 chr16 70299549 70299793 + 14.5 0.000 intron (NM_001257175, intron 1 of 8) FLAM_C|SINE|Alu 618 NM_001257175 11269 Hs.221761 NM_007242 ENSG00000157349 DDX19B DBP5|DDX19|RNAh DEAD-box helicase 19B protein-coding chr12-1090 chr12 47980244 47980488 + 14.5 0.000 intron (NM_033150, intron 38 of 52) intron (NM_033150, intron 38 of 52) 16770 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr11-1311 chr11 64292631 64292875 + 14.5 0.000 intron (NM_001317090, intron 1 of 6) intron (NM_001317090, intron 1 of 6) 755 NM_001317090 50801 Hs.647233 NM_016611 ENSG00000182450 KCNK4 FHEIG|K2p4.1|TRAAK|TRAAK1 potassium two pore domain channel subfamily K member 4 protein-coding chr1-1676 chr1 19666561 19666805 + 14.5 0.000 intron (NM_000871, intron 1 of 2) L2a|LINE|L2 1808 NM_000871 3362 Hs.22180 NM_000871 ENSG00000158748 HTR6 5-HT6|5-HT6R 5-hydroxytryptamine receptor 6 protein-coding chr1-2624 chr1 206116622 206116866 + 14.5 0.000 exon (NM_000707, exon 1 of 2) exon (NM_000707, exon 1 of 2) 644 NM_000707 553 Hs.1372 NM_000707 ENSG00000198049 AVPR1B AVPR3|V1bR arginine vasopressin receptor 1B protein-coding chr22-263 chr22 31399340 31399584 + 14.5 0.000 promoter-TSS (NM_004147) promoter-TSS (NM_004147) -142 NM_004147 4733 Hs.115242 NM_004147 ENSG00000185721 DRG1 NEDD3 developmentally regulated GTP binding protein 1 protein-coding chr3-1394 chr3 125057226 125057470 + 14.5 0.000 Intergenic Intergenic -1351 NM_020733 57493 Hs.477420 NM_020733 ENSG00000173706 HEG1 HEG|MST112|MSTP112 heart development protein with EGF like domains 1 protein-coding chr11-1599 chr11 75820691 75820935 + 14.5 0.000 intron (NM_003369, intron 1 of 14) AluJb|SINE|Alu 5603 NM_003369 7405 Hs.202470 NM_003369 ENSG00000198382 UVRAG DHTX|VPS38|p63 UV radiation resistance associated protein-coding chr19-1263 chr19 44903788 44904032 + 14.5 0.000 TTS (NM_001128917) TTS (NM_001128917) -1886 NM_001302688 348 Hs.654439 NM_000041 ENSG00000130203 APOE AD2|APO-E|ApoE4|LDLCQ5|LPG apolipoprotein E protein-coding chr6-1082 chr6 144036387 144036631 + 14.5 0.000 intron (NM_001289040, intron 1 of 5) intron (NM_001289040, intron 1 of 5) 18753 NM_001317159 5325 Hs.743225 NM_002656 ENSG00000118495 PLAGL1 LOT1|ZAC|ZAC1 PLAG1 like zinc finger 1 protein-coding chr2-1677 chr2 42154583 42154827 + 14.5 0.000 intron (NR_110584, intron 1 of 3) L1ME4a|LINE|L1 -14648 NM_001145076 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr11-1643 chr11 116834132 116834376 + 14.5 0.000 Intergenic Intergenic -1863 NR_126362 104326055 Hs.627813 NR_126362 ENSG00000235910 APOA1-AS - APOA1 antisense RNA ncRNA chr14-767 chr14 90675592 90675836 + 14.5 0.000 intron (NM_001320421, intron 9 of 20) intron (NM_001320421, intron 9 of 20) -21619 NR_135190 105370622 Hs.662373 NR_135190 ENSG00000258716 LOC105370622 - uncharacterized LOC105370622 ncRNA chr16-1077 chr16 18734425 18734669 + 14.5 0.000 Intergenic SVA_B|Retroposon|SVA 55787 NM_001030009 6210 Hs.370504 NM_001019 ENSG00000134419 RPS15A DBA20|S15a ribosomal protein S15a protein-coding chr7-1138 chr7 102542917 102543161 + 14.5 0.000 intron (NM_001097615, intron 4 of 8) intron (NM_001097615, intron 4 of 8) 1749 NM_001363506 107983993 NM_001363506 ENSG00000284981 UPK3BL2 - uroplakin 3B like 2 protein-coding chr3-876 chr3 134352603 134352847 + 14.5 0.000 Intergenic Intergenic 15137 NR_106885 102466744 NR_106885 ENSG00000277723 MIR6827 hsa-mir-6827 microRNA 6827 ncRNA chr8-642 chr8 63086128 63086372 + 14.5 0.000 promoter-TSS (NM_000370) promoter-TSS (NM_000370) -197 NM_000370 7274 Hs.69049 NM_000370 ENSG00000137561 TTPA ATTP|AVED|TTP1|alphaTTP alpha tocopherol transfer protein protein-coding chr4-306 chr4 180566501 180566745 + 14.5 0.000 Intergenic (GTGTGG)n|Simple_repeat|Simple_repeat 592526 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr10-915 chr10 113274384 113274628 + 14.5 0.000 Intergenic Intergenic 145235 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr15-747 chr15 96868278 96868522 + 14.5 0.000 Intergenic MIRb|SINE|MIR 84965 NR_158220 145946 Hs.326528 NM_173499 ENSG00000185594 SPATA8 SRG8 spermatogenesis associated 8 ncRNA chr6-1061 chr6 125780310 125780554 + 14.5 0.000 promoter-TSS (NM_001199619) promoter-TSS (NM_001199619) -683 NM_001199620 135112 Hs.171426 NM_181782 ENSG00000111912 NCOA7 ERAP140|ESNA1|NCOA7-AS|Nbla00052|Nbla10993|TLDC4|dJ187J11.3 nuclear receptor coactivator 7 protein-coding chr16-1142 chr16 66471785 66472029 + 14.5 0.000 intron (NR_109960, intron 2 of 2) intron (NR_109960, intron 2 of 2) 4495 NR_109960 101927726 Hs.739193 NR_109960 ENSG00000261656 BEAN1-AS1 CTD-2258A20.5 BEAN1 antisense RNA 1 ncRNA chr6-581 chr6 3324290 3324534 + 14.5 0.000 intron (NM_021945, intron 4 of 10) intron (NM_021945, intron 4 of 10) 65465 NM_001135750 389362 Hs.207069 NM_001128591 ENSG00000180822 PSMG4 C6orf86|PAC4|bA506K6.2 proteasome assembly chaperone 4 protein-coding chr3-1411 chr3 133897623 133897867 + 14.5 0.000 Intergenic Intergenic -1863 NM_016577 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr7-334 chr7 151156203 151156447 + 14.5 0.000 intron (NM_001098834, intron 1 of 1) AluSz|SINE|Alu 11223 NM_001098834 2636 NM_001098834 ENSG00000164900 GBX1 Huh-17 gastrulation brain homeobox 1 protein-coding chr5-859 chr5 483369 483613 + 14.5 0.000 intron (NM_001284351, intron 5 of 16) CpG-21792 10255 NR_125375 100288152 Hs.535801 NR_125375 SLC9A3-AS1 UC011CLY.2 SLC9A3 antisense RNA 1 ncRNA chr9-657 chr9 75142863 75143107 + 14.5 0.000 intron (NM_012383, intron 9 of 9) AluSz|SINE|Alu 54471 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr15-534 chr15 96327382 96327626 + 14.5 0.000 promoter-TSS (NR_125738) promoter-TSS (NR_125738) -143 NR_102744 644192 Hs.58690 NR_102743 ENSG00000247809 NR2F2-AS1 - NR2F2 antisense RNA 1 ncRNA chr4-384 chr4 164607148 164607392 + 14.5 0.000 Intergenic AluY|SINE|Alu -146861 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding chr6-1106 chr6 154721521 154721765 + 14.5 0.000 Intergenic L1MEd|LINE|L1 -11735 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr1-2452 chr1 94993918 94994162 + 14.5 0.000 intron (NM_144988, intron 3 of 3) intron (NM_144988, intron 3 of 3) 66012 NR_033998 729970 Hs.297988 NR_033998 ENSG00000235501 LOC729970 - hCG2028352-like ncRNA chr11-1554 chr11 67456392 67456636 + 14.5 0.000 intron (NM_001300895, intron 3 of 5) intron (NM_001300895, intron 3 of 5) 1160 NM_145200 57010 Hs.143036 NM_145200 ENSG00000175544 CABP4 CRSD|CSNB2B calcium binding protein 4 protein-coding chr15-253 chr15 101316727 101316971 + 14.5 0.000 intron (NM_002570, intron 19 of 21) intron (NM_002570, intron 19 of 21) -7545 NR_045387 100507472 Hs.498494 NR_045387 LOC100507472 - uncharacterized LOC100507472 ncRNA chr3-1250 chr3 39139116 39139360 + 14.5 0.000 TTS (NM_001105513) TTS (NM_001105513) 1032 NR_106880 102466743 NR_106880 ENSG00000284158 MIR6822 hsa-mir-6822 microRNA 6822 ncRNA chr17-1031 chr17 72592558 72592802 + 14.5 0.000 non-coding (NR_152516, exon 1 of 4) non-coding (NR_152516, exon 1 of 4) 124 NR_137280 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA chr1-2367 chr1 44640550 44640794 + 14.5 0.000 intron (NM_001319957, intron 7 of 13) intron (NM_001319957, intron 7 of 13) 30384 NR_145816 109623472 NR_145816 SNORD145 - small nucleolar RNA, C/D box 145 snoRNA chr8-973 chr8 133406779 133407023 + 14.5 0.000 Intergenic Intergenic -109597 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr11-1109 chr11 59566095 59566339 + 14.5 0.000 Intergenic Intergenic 28941 NR_036120 100422880 NR_036120 ENSG00000264559 MIR3162 mir-3162 microRNA 3162 ncRNA chr15-529 chr15 89738501 89738745 + 14.5 0.000 intron (NM_001284395, intron 16 of 16) AluSx|SINE|Alu 12686 NM_018670 55897 Hs.447531 NM_018670 ENSG00000166823 MESP1 bHLHc5 mesoderm posterior bHLH transcription factor 1 protein-coding chr16-1016 chr16 745785 746029 + 14.5 0.000 Intergenic Intergenic -4910 NM_001304799 64428 Hs.513247 NM_022493 ENSG00000103245 CIAO3 HPRN|IOP1|LET1L|NAR1|NARFL|PRN cytosolic iron-sulfur assembly component 3 protein-coding chr2-1239 chr2 50346554 50346798 + 14.5 0.000 intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) 1078 NM_001330097 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding chr11-1066 chr11 12159642 12159886 + 14.5 0.000 intron (NR_144417, intron 2 of 26) intron (NR_144417, intron 2 of 26) -2315 NM_001282667 9645 Hs.501928 NM_014632 ENSG00000133816 MICAL2 MICAL-2|MICAL2PV1|MICAL2PV2 microtubule associated monooxygenase, calponin and LIM domain containing 2 protein-coding chr1-1978 chr1 3436485 3436729 + 14.5 0.000 3' UTR (NM_199454, exon 17 of 17) 3' UTR (NM_199454, exon 17 of 17) -18058 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr19-1540 chr19 17037135 17037379 + 14.5 0.000 Intergenic Intergenic -10447 NM_015692 27151 Hs.631644 NM_015692 ENSG00000160111 CPAMD8 ASGD8|K-CAP|VIP C3 and PZP like alpha-2-macroglobulin domain containing 8 protein-coding chr15-710 chr15 79035354 79035598 + 14.5 0.000 intron (NM_001145648, intron 5 of 26) MER45A|DNA|hAT-Tip100 -29816 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr4-1040 chr4 102431088 102431332 + 14.5 0.000 intron (NR_136202, intron 2 of 4) AluY|SINE|Alu -70149 NM_001165412 4790 Hs.618430 NM_003998 ENSG00000109320 NFKB1 CVID12|EBP-1|KBF1|NF-kB1|NF-kappa-B1|NF-kappaB|NFKB-p105|NFKB-p50|NFkappaB|p105|p50 nuclear factor kappa B subunit 1 protein-coding chr11-1553 chr11 67311751 67311995 + 14.5 0.000 exon (NM_017857, exon 14 of 14) exon (NM_017857, exon 14 of 14) -5966 NR_024469 100130987 Hs.664585 NR_024469 LOC100130987 - uncharacterized LOC100130987 ncRNA chr1-2376 chr1 46552962 46553206 + 14.5 0.000 intron (NR_038403, intron 3 of 7) intron (NR_038403, intron 3 of 7) -1427 NM_001322255 148930 Hs.350764 NM_182516 ENSG00000162456 KNCN Kino|L5 kinocilin protein-coding chr16-761 chr16 89566090 89566334 + 14.5 0.000 3' UTR (NM_000977, exon 6 of 6) 3' UTR (NM_000977, exon 6 of 6) 4782 NR_002450 606500 NR_002450 SNORD68 HBII-202 small nucleolar RNA, C/D box 68 snoRNA chr9-681 chr9 114156786 114157030 + 14.5 0.000 intron (NM_032888, intron 1 of 60) intron (NM_032888, intron 1 of 60) 1371 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr8-653 chr8 92587780 92588024 + 14.5 0.000 intron (NR_125827, intron 3 of 4) MIRb|SINE|MIR 67592 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA chr1-2062 chr1 117612973 117613217 + 14.5 0.000 intron (NM_017709, intron 1 of 1) intron (NM_017709, intron 1 of 1) 7047 NM_017709 54855 Hs.356216 NM_017709 ENSG00000183508 TENT5C FAM46C terminal nucleotidyltransferase 5C protein-coding chr4-856 chr4 169967927 169968171 + 14.5 0.000 intron (NR_037878, intron 1 of 4) L1MA5A|LINE|L1 7853 NR_037878 100506085 Hs.649173 NR_037878 ENSG00000248319 LINC02275 - long intergenic non-protein coding RNA 2275 ncRNA chr11-1306 chr11 63962444 63962688 + 14.5 0.000 Intergenic Intergenic -12054 NM_004074 1351 Hs.743989 NM_004074 ENSG00000176340 COX8A COX|COX8|COX8-2|COX8L|VIII|VIII-L cytochrome c oxidase subunit 8A protein-coding chr2-1095 chr2 65436263 65436507 + 14.5 0.000 Intergenic CpG -3786 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr3-1349 chr3 87574379 87574623 + 14.5 0.000 Intergenic HERVH-int|LTR|ERV1 -218205 NM_001322210 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr9-672 chr9 96450700 96450944 + 14.5 0.000 intron (NM_014282, intron 1 of 7) CpG 653 NM_014282 22927 Hs.494567 NM_014282 ENSG00000130956 HABP4 IHABP-4|IHABP4|Ki-1/57|SERBP1L hyaluronan binding protein 4 protein-coding chr8-543 chr8 144529992 144530236 + 14.5 0.000 3' UTR (NM_001308207, exon 12 of 12) 3' UTR (NM_001308207, exon 12 of 12) -1003 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding chr13-375 chr13 20773842 20774086 + 14.5 0.000 promoter-TSS (NR_134934) promoter-TSS (NR_134934) -3 NM_001318939 221143 Hs.26674 NM_174928 ENSG00000150456 EEF1AKMT1 ESP13|N6AMT2 EEF1A lysine methyltransferase 1 protein-coding chr9-1191 chr9 33287175 33287419 + 14.5 0.000 Intergenic LTR41|LTR|ERVL -3219 NM_002504 4799 Hs.413074 NM_002504 ENSG00000086102 NFX1 NFX2|TEG-42|Tex42 nuclear transcription factor, X-box binding 1 protein-coding chr1-1533 chr1 98045250 98045494 + 14.5 0.000 promoter-TSS (NR_039604) promoter-TSS (NR_039604) -21 NR_039604 100616452 NR_039604 ENSG00000284247 MIR2682 mir-2682 microRNA 2682 ncRNA chr22-685 chr22 38026377 38026621 + 14.5 0.000 intron (NM_001301130, intron 5 of 5) MIR3|SINE|MIR -30756 NM_001039584 9463 Hs.180871 NM_012407 ENSG00000100151 PICK1 PICK|PRKCABP protein interacting with PRKCA 1 protein-coding chr17-1383 chr17 67831299 67831543 + 14.5 0.000 intron (NM_182641, intron 1 of 27) intron (NM_182641, intron 1 of 27) 5918 NM_004459 2186 Hs.444200 NM_004459 ENSG00000171634 BPTF FAC1|FALZ|NEDDFL|NURF301 bromodomain PHD finger transcription factor protein-coding chrX-496 chrX 78217586 78217830 + 14.5 0.000 Intergenic HERVK22-int|LTR|ERVK -78058 NM_015975 51616 Hs.592248 NM_015975 ENSG00000187325 TAF9B DN-7|DN7|TAF9L|TAFII31L|TFIID-31 TATA-box binding protein associated factor 9b protein-coding chr8-320 chr8 142802028 142802272 + 14.5 0.000 Intergenic G-rich|Low_complexity|Low_complexity -15611 NM_003695 8581 Hs.415762 NM_003695 ENSG00000167656 LY6D E48|Ly-6D lymphocyte antigen 6 family member D protein-coding chr11-1240 chr11 132360024 132360268 + 14.5 0.000 Intergenic Intergenic 75844 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA chr22-520 chr22 43296460 43296704 + 14.5 0.000 intron (NM_173050, intron 3 of 21) intron (NM_173050, intron 3 of 21) 20640 NR_134582 101927447 Hs.621227 NR_134582 ENSG00000203527 LOC101927447 - uncharacterized LOC101927447 ncRNA chr13-300 chr13 113152519 113152763 + 14.5 0.000 Intergenic GA-rich|Low_complexity|Low_complexity -6007 NM_003891 8858 Hs.1011 NM_003891 ENSG00000126231 PROZ PZ protein Z, vitamin K dependent plasma glycoprotein protein-coding chrX-468 chrX 55451896 55452140 + 14.5 0.000 promoter-TSS (NM_014061) promoter-TSS (NM_014061) -109 NM_014061 28986 Hs.279819 NM_014061 ENSG00000187601 MAGEH1 APR-1|APR1|MAGEH MAGE family member H1 protein-coding chr15-624 chr15 40905999 40906243 + 14.5 0.000 promoter-TSS (NR_135836) promoter-TSS (NR_135836) -688 NR_135836 105370943 Hs.574244 NR_135836 LOC105370943 - uncharacterized LOC105370943 ncRNA chr9-745 chr9 136430039 136430283 + 14.5 0.000 intron (NM_001318502, intron 9 of 9) intron (NM_001318502, intron 9 of 9) 9684 NM_019892 56623 Hs.120998 NM_019892 ENSG00000148384 INPP5E CORS1|CPD4|JBTS1|MORMS|PPI5PIV|pharbin inositol polyphosphate-5-phosphatase E protein-coding chr6-679 chr6 42214889 42215133 + 14.5 0.000 intron (NM_018141, intron 1 of 6) intron (NM_018141, intron 1 of 6) 2850 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr2-1070 chr2 25397747 25397991 + 14.5 0.000 intron (NM_001351385, intron 14 of 17) AluSx|SINE|Alu -55279 NM_175629 1788 Hs.515840 NM_022552 ENSG00000119772 DNMT3A DNMT3A2|M.HsaIIIA|TBRS DNA methyltransferase 3 alpha protein-coding chr2-1837 chr2 144894755 144894999 + 14.5 0.000 intron (NR_033870, intron 2 of 4) intron (NR_033870, intron 2 of 4) 226910 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr5-1024 chr5 45036508 45036752 + 14.5 0.000 Intergenic Intergenic 227683 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding chr20-388 chr20 62958816 62959060 + 14.5 0.000 intron (NM_001302643, intron 4 of 13) intron (NM_001302643, intron 4 of 13) 6229 NM_022082 63910 Hs.512686 NM_022082 ENSG00000101194 SLC17A9 C20orf59|POROK8|VNUT solute carrier family 17 member 9 protein-coding chr1-818 chr1 26818317 26818561 + 14.5 0.000 Intergenic SVA_F|Retroposon|SVA -8249 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr1-2197 chr1 3775490 3775734 + 14.5 0.000 intron (NM_001163724, intron 3 of 3) intron (NM_001163724, intron 3 of 3) 2825 NM_001163724 388588 Hs.22047 NM_001163724 ENSG00000235169 SMIM1 Vel small integral membrane protein 1 (Vel blood group) protein-coding chr14-476 chr14 63542824 63543068 + 14.5 0.000 non-coding (NR_158218, exon 1 of 1) non-coding (NR_158218, exon 1 of 1) 162 NR_158218 112268140 Hs.632347 NR_158218 LOC112268140 - loricrin-like ncRNA chr2-1350 chr2 190978395 190978639 + 14.5 0.000 intron (NM_007315, intron 21 of 24) intron (NM_007315, intron 21 of 24) 35733 NM_139266 6772 Hs.642990 NM_007315 ENSG00000115415 STAT1 CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 signal transducer and activator of transcription 1 protein-coding chr2-1193 chr2 11539956 11540200 + 14.5 0.000 TTS (NR_039627) TTS (NR_039627) 259 NM_148903 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding chr18-154 chr18 79335935 79336179 + 14.5 0.000 intron (NR_148360, intron 18 of 31) intron (NR_148360, intron 18 of 31) -59873 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chr7-1230 chr7 19442295 19442539 + 14.5 0.000 Intergenic LTR78|LTR|ERV1 263019 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr12-1065 chr12 22390565 22390809 + 14.5 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -55973 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding chr9-1251 chr9 93260068 93260312 + 14.5 0.000 intron (NM_006648, intron 11 of 28) intron (NM_006648, intron 11 of 28) 75260 NM_006648 65268 Hs.654856 NM_006648 ENSG00000165238 WNK2 NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43 WNK lysine deficient protein kinase 2 protein-coding chr17-604 chr17 28517011 28517255 + 14.5 0.000 intron (NM_001369369, intron 1 of 8) intron (NM_001369369, intron 1 of 8) -6808 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr2-627 chr2 128318732 128318976 + 14.5 0.000 promoter-TSS (NM_004807) promoter-TSS (NM_004807) 14 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding chr1-2006 chr1 25118929 25119173 + 14.5 0.000 Intergenic Intergenic 95548 NR_039623 100616365 NR_039623 ENSG00000264371 MIR4425 - microRNA 4425 ncRNA chrX-188 chrX 126475185 126475429 + 14.5 0.000 Intergenic AluSx1|SINE|Alu 77507 NM_178470 139170 Hs.120403 NM_178470 ENSG00000198889 DCAF12L1 KIAA1892L|WDR40B DDB1 and CUL4 associated factor 12 like 1 protein-coding chr19-1340 chr19 11324237 11324481 + 14.5 0.000 3' UTR (NM_004283, exon 5 of 5) 3' UTR (NM_004283, exon 5 of 5) 15298 NM_004283 9545 Hs.744916 NM_004283 ENSG00000105514 RAB3D D2-2|GOV|RAB16|RAD3D RAB3D, member RAS oncogene family protein-coding chr12-941 chr12 18998532 18998776 + 14.5 0.000 Intergenic Intergenic -131079 NM_001190860 54477 Hs.188614 NM_019012 ENSG00000052126 PLEKHA5 PEPP-2|PEPP2 pleckstrin homology domain containing A5 protein-coding chr17-328 chr17 2337448 2337692 + 14.5 0.000 promoter-TSS (NM_018128) promoter-TSS (NM_018128) 69 NM_001346700 9905 Hs.513861 NM_014853 ENSG00000141258 SGSM2 RUTBC1 small G protein signaling modulator 2 protein-coding chr10-1047 chr10 117505717 117505961 + 14.5 0.000 intron (NR_002791, intron 2 of 3) intron (NR_002791, intron 2 of 3) -36606 NM_001165924 2018 Hs.202095 NM_004098 ENSG00000170370 EMX2 - empty spiracles homeobox 2 protein-coding chr2-1361 chr2 200963987 200964231 + 14.5 0.000 promoter-TSS (NM_006190) promoter-TSS (NM_006190) -449 NM_006190 4999 Hs.444870 NM_006190 ENSG00000115942 ORC2 ORC2L origin recognition complex subunit 2 protein-coding chr9-1162 chr9 2882592 2882836 + 14.5 0.000 Intergenic Intergenic -38619 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr13-400 chr13 94228716 94228960 + 14.5 0.000 intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) -40847 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA chr10-710 chr10 133308567 133308811 + 14.5 0.000 promoter-TSS (NM_145806) promoter-TSS (NM_145806) -225 NM_145806 118472 Hs.422113 NM_145806 ENSG00000198546 ZNF511 - zinc finger protein 511 protein-coding chr20-628 chr20 51456578 51456822 + 14.5 0.000 intron (NM_012340, intron 5 of 10) intron (NM_012340, intron 5 of 10) -3723 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr15-752 chr15 99017055 99017299 + 14.5 0.000 intron (NR_126487, intron 1 of 3) intron (NR_126487, intron 1 of 3) 2473 NR_126487 104564224 Hs.32769 NR_126487 LUNAR1 - leukemia-associated non-coding IGF1R activator RNA 1 ncRNA chr7-1064 chr7 1321325 1321569 + 14.5 0.000 Intergenic Intergenic 88575 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding chr10-67 chr10 5811538 5811782 + 14.5 0.000 intron (NM_001494, intron 1 of 10) (A)n|Simple_repeat|Simple_repeat 1774 NM_001494 2665 Hs.299055 NM_001494 ENSG00000057608 GDI2 HEL-S-46e|RABGDIB GDP dissociation inhibitor 2 protein-coding chr1-2518 chr1 155094519 155094763 + 14.5 0.000 Intergenic Intergenic 15804 NM_004952 1944 Hs.516656 NM_004952 ENSG00000143590 EFNA3 EFL2|EPLG3|Ehk1-L|LERK3 ephrin A3 protein-coding chr9-1057 chr9 6585142 6585386 + 14.5 0.000 intron (NM_000170, intron 15 of 24) intron (NM_000170, intron 15 of 24) 60428 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr3-1390 chr3 123348417 123348661 + 14.5 0.000 intron (NM_183357, intron 2 of 20) intron (NM_183357, intron 2 of 20) 67803 NM_001199642 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr5-796 chr5 138154653 138154897 + 14.5 0.000 intron (NM_139199, intron 20 of 26) intron (NM_139199, intron 20 of 26) -15347 NM_003551 8382 Hs.730856 NM_003551 ENSG00000112981 NME5 NM23-H5|NM23H5|RSPH23 NME/NM23 family member 5 protein-coding chr3-1328 chr3 63908163 63908407 + 14.5 0.000 intron (NM_001177387, intron 1 of 12) intron (NM_001177387, intron 1 of 12) 3487 NR_148359 100861563 NR_148359 ENSG00000280620 SCAANT1 ATXN7-AS1 SCA7/ATXN7 antisense RNA 1 ncRNA chr2-290 chr2 102488404 102488648 + 14.5 0.000 intron (NM_001011552, intron 2 of 11) intron (NM_001011552, intron 2 of 11) 15300 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding chr9-1074 chr9 77822727 77822971 + 14.5 0.000 intron (NM_002072, intron 2 of 6) intron (NM_002072, intron 2 of 6) -174527 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr5-1188 chr5 177389365 177389609 + 14.5 0.000 intron (NM_003052, intron 8 of 12) intron (NM_003052, intron 8 of 12) 5053 NM_003052 6569 Hs.936 NM_003052 ENSG00000131183 SLC34A1 FRTS2|HCINF2|NAPI-3|NPHLOP1|NPT2|NPTIIa|SLC11|SLC17A2 solute carrier family 34 member 1 protein-coding chr14-641 chr14 69873989 69874233 + 14.5 0.000 Intergenic Intergenic -5305 NM_001034852 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding chr12-427 chr12 78864067 78864311 + 14.4 0.000 promoter-TSS (NM_005639) promoter-TSS (NM_005639) 207 NM_001135805 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding chr2-1648 chr2 28130158 28130402 + 14.4 0.000 intron (NM_199193, intron 8 of 13) intron (NM_199193, intron 8 of 13) 76681 NR_120504 100505736 Hs.659540 NR_120504 LOC100505736 - uncharacterized LOC100505736 ncRNA chr14-593 chr14 103889362 103889606 + 14.4 0.000 Intergenic Intergenic 32045 NM_001127393 9556 Hs.109052 NM_004894 ENSG00000156411 ATP5MPL 6.8PL|C14orf2|MLQ|MP68|PLPM ATP synthase membrane subunit 6.8PL protein-coding chr17-1285 chr17 32138941 32139185 + 14.4 0.000 Intergenic Intergenic -3391 NM_001033568 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding chr5-1011 chr5 37229064 37229308 + 14.4 0.000 intron (NM_023073, intron 9 of 51) AluSg|SINE|Alu -19860 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA chr16-1036 chr16 1818253 1818497 + 14.4 0.000 intron (NM_001286249, intron 4 of 7) intron (NM_001286249, intron 4 of 7) 8450 NM_005326 3029 Hs.157394 NM_005326 ENSG00000063854 HAGH GLO2|GLX2|GLXII|HAGH1 hydroxyacylglutathione hydrolase protein-coding chr2-1961 chr2 231402340 231402584 + 14.4 0.000 Intergenic HERVE-int|LTR|ERV1 6752 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr9-1266 chr9 97848559 97848803 + 14.4 0.000 intron (NR_147055, intron 1 of 10) CpG 4399 NR_147055 101928337 NR_147055 ENSG00000236130 PTCSC2 - papillary thyroid carcinoma susceptibility candidate 2 ncRNA chr5-1104 chr5 132386563 132386807 + 14.4 0.000 intron (NM_003060, intron 4 of 9) intron (NM_003060, intron 4 of 9) -16769 NR_110997 553103 Hs.570908 NR_110997 ENSG00000233006 MIR3936HG SLC22A5-AS1 MIR3936 host gene ncRNA chrX-530 chrX 119118819 119119063 + 14.4 0.000 intron (NM_020721, intron 3 of 13) intron (NM_020721, intron 3 of 13) 31638 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr16-357 chr16 2752516 2752760 + 14.4 0.000 promoter-TSS (NR_027275) promoter-TSS (NR_027275) 0 NM_016333 23524 Hs.433343 NM_016333 ENSG00000167978 SRRM2 300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300 serine/arginine repetitive matrix 2 protein-coding chr10-1197 chr10 76330435 76330679 + 14.4 0.000 intron (NM_001305581, intron 6 of 6) MER39|LTR|ERV1 547796 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr1-1510 chr1 44406198 44406442 + 14.4 0.000 intron (NM_018150, intron 1 of 14) CpG 1065 NM_018150 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr20-507 chr20 61407883 61408127 + 14.4 0.000 intron (NM_001794, intron 2 of 15) MLT1D|LTR|ERVL-MaLR -91416 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr11-1371 chr11 129861866 129862110 + 14.4 0.000 Intergenic Intergenic 31021 NM_006165 4798 Hs.530539 NM_006165 ENSG00000170322 NFRKB INO80G nuclear factor related to kappaB binding protein protein-coding chr3-1228 chr3 16517312 16517556 + 14.4 0.000 Intergenic Intergenic -3735 NM_015150 23180 Hs.98910 NM_015150 ENSG00000131378 RFTN1 MIG2|PIB10|PIG9|RAFTLIN raftlin, lipid raft linker 1 protein-coding chr22-505 chr22 38468058 38468302 + 14.4 0.000 promoter-TSS (NM_006855) promoter-TSS (NM_006855) 84 NM_006855 11015 Hs.745072 NM_006855 ENSG00000100196 KDELR3 ERD2L3 KDEL endoplasmic reticulum protein retention receptor 3 protein-coding chr11-1277 chr11 43276704 43276948 + 14.4 0.000 Intergenic Intergenic -7457 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo chr9-814 chr9 129174646 129174890 + 14.4 0.000 TTS (NM_203434) TTS (NM_203434) 3493 NM_203434 389792 Hs.529857 NM_203434 ENSG00000188483 IER5L bA247A12.2 immediate early response 5 like protein-coding chr4-981 chr4 56161775 56162019 + 14.4 0.000 Intergenic AluSz|SINE|Alu -8298 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr18-339 chr18 51283210 51283454 + 14.4 0.000 Intergenic Intergenic -85651 NM_016626 51320 Hs.465144 NM_016626 ENSG00000176624 MEX3C BM-013|MEX-3C|RKHD2|RNF194 mex-3 RNA binding family member C protein-coding chr20-222 chr20 2841030 2841274 + 14.4 0.000 promoter-TSS (NM_022760) promoter-TSS (NM_022760) -1 NM_001271168 64773 Hs.29341 NM_022760 ENSG00000132635 PCED1A C20orf81|FAM113A|bA12M19.1 PC-esterase domain containing 1A protein-coding chr19-495 chr19 42177116 42177360 + 14.4 0.000 Intergenic CpG 40439 NR_073049 162989 Hs.515432 NM_133328 ENSG00000160570 DEDD2 FLAME-3|FLAME3 death effector domain containing 2 protein-coding chr1-2060 chr1 111904834 111905078 + 14.4 0.000 intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) -4701 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA chrX-151 chrX 13722116 13722360 + 14.4 0.000 intron (NM_014563, intron 1 of 4) (A)n|Simple_repeat|Simple_repeat 12382 NM_001128835 6399 Hs.592238 NM_014563 ENSG00000196459 TRAPPC2 MIP2A|SEDL|SEDT|TRAPPC2P1|TRS20|ZNF547L|hYP38334 trafficking protein particle complex 2 protein-coding chr1-1107 chr1 225882120 225882364 + 14.4 0.000 intron (NM_014698, intron 1 of 24) CpG 138 NM_014698 9725 Hs.119387 NM_014698 ENSG00000196187 TMEM63A KIAA0792 transmembrane protein 63A protein-coding chr3-1405 chr3 130093464 130093708 + 14.4 0.000 intron (NM_001136152, intron 4 of 7) AluSx1|SINE|Alu 718 NR_146710 105374105 Hs.665070 NR_146710 LINC02014 - long intergenic non-protein coding RNA 2014 ncRNA chr5-1134 chr5 139866267 139866511 + 14.4 0.000 intron (NM_004883, intron 4 of 9) MER103C|DNA|hAT-Charlie 70581 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr22-604 chr22 50627430 50627674 + 14.4 0.000 intron (NM_001362782, intron 1 of 7) intron (NM_001362782, intron 1 of 7) 600 NM_001362782 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr17-1179 chr17 78849202 78849446 + 14.4 0.000 Intergenic Intergenic -8797 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding chr11-1262 chr11 15123983 15124227 + 14.4 0.000 intron (NM_001042536, intron 1 of 12) (CTCA)n|Simple_repeat|Simple_repeat 9182 NM_001042536 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding chrX-374 chrX 53234874 53235118 + 14.4 0.000 exon (NM_001111125, exon 15 of 15) exon (NM_001111125, exon 15 of 15) -9574 NM_001353984 8242 Hs.631768 NM_004187 ENSG00000126012 KDM5C DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169 lysine demethylase 5C protein-coding chr6-1028 chr6 87283288 87283532 + 14.4 0.000 3' UTR (NM_198568, exon 3 of 3) 3' UTR (NM_198568, exon 3 of 3) -39178 NM_001042493 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr2-1372 chr2 216547076 216547320 + 14.4 0.000 Intergenic Intergenic 48354 NM_000998 6168 Hs.433701 NM_000998 ENSG00000197756 RPL37A L37A ribosomal protein L37a protein-coding chr10-1060 chr10 126689453 126689697 + 14.4 0.000 Intergenic Intergenic -19065 NR_146939 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr10-948 chr10 127195930 127196174 + 14.4 0.000 5' UTR (NM_001039762, exon 1 of 6) 5' UTR (NM_001039762, exon 1 of 6) 539 NM_001039762 642938 Hs.613882 NM_001039762 ENSG00000188916 INSYN2A C10orf141|FAM196A|INSYN2 inhibitory synaptic factor 2A protein-coding chr1-1022 chr1 41528088 41528332 + 14.4 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -43527 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr10-708 chr10 133174957 133175201 + 14.4 0.000 intron (NM_152643, intron 3 of 29) (ATGG)n|Simple_repeat|Simple_repeat 14860 NM_001347864 85442 Hs.530685 NM_152643 ENSG00000171798 KNDC1 C10orf23|RASGEF2|Very-KIND|bB439H18.3|v-KIND kinase non-catalytic C-lobe domain containing 1 protein-coding chr5-865 chr5 10725324 10725568 + 14.4 0.000 intron (NM_004394, intron 2 of 3) intron (NM_004394, intron 2 of 3) 35788 NM_004394 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chr1-1397 chr1 154961440 154961684 + 14.4 0.000 promoter-TSS (NM_001321726) promoter-TSS (NM_001321726) 91 NM_001321726 101928120 Hs.533597 NM_001321726 LOC101928120 - uncharacterized LOC101928120 protein-coding chr9-1328 chr9 126699532 126699776 + 14.4 0.000 3' UTR (NM_002316, exon 8 of 8) 3' UTR (NM_002316, exon 8 of 8) 85211 NM_001174146 4010 Hs.129133 NM_002316 ENSG00000136944 LMX1B LMX1.2|NPS1 LIM homeobox transcription factor 1 beta protein-coding chr15-453 chr15 36963152 36963396 + 14.4 0.000 intron (NM_172316, intron 8 of 12) AluSx1|SINE|Alu 9627 NR_107030 102466875 NR_107030 ENSG00000277202 MIR8063 hsa-mir-8063 microRNA 8063 ncRNA chr6-808 chr6 52509494 52509738 + 14.4 0.000 intron (NM_012288, intron 4 of 10) intron (NM_012288, intron 4 of 10) 67444 NM_012288 9697 Hs.520182 NM_012288 ENSG00000065308 TRAM2 - translocation associated membrane protein 2 protein-coding chr7-1269 chr7 43117064 43117308 + 14.4 0.000 promoter-TSS (NR_135295) promoter-TSS (NR_135295) -710 NR_135295 100127950 Hs.666610 NR_135295 ENSG00000181211 HECW1-IT1 - HECW1 intronic transcript 1 ncRNA chr12-1148 chr12 60494113 60494357 + 14.4 0.000 Intergenic LTR41B|LTR|ERVL 804865 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr11-949 chr11 111541736 111541980 + 14.4 0.000 intron (NM_001258390, intron 2 of 7) intron (NM_001258390, intron 2 of 7) 1350 NM_001258390 143903 Hs.503831 NM_178834 ENSG00000204381 LAYN - layilin protein-coding chr12-1181 chr12 93785432 93785676 + 14.4 0.000 intron (NM_001320100, intron 2 of 2) intron (NM_001320100, intron 2 of 2) -47731 NR_110093 101928731 Hs.659971 NR_110092 ENSG00000258274 LOC101928731 - uncharacterized LOC101928731 ncRNA chr4-926 chr4 15983112 15983356 + 14.4 0.000 intron (NM_001371408, intron 22 of 24) L2c|LINE|L2 -20059 NM_031950 83888 Hs.98785 NM_031950 ENSG00000137441 FGFBP2 HBP17RP|KSP37 fibroblast growth factor binding protein 2 protein-coding chr4-626 chr4 169184019 169184263 + 14.4 0.000 intron (NM_020870, intron 2 of 11) intron (NM_020870, intron 2 of 11) 86815 NM_020870 57630 Hs.301804 NM_020870 ENSG00000154447 SH3RF1 POSH|RNF142|SH3MD2 SH3 domain containing ring finger 1 protein-coding chr5-508 chr5 175796967 175797211 + 14.4 0.000 intron (NM_006650, intron 1 of 4) CpG 556 NM_006650 10814 Hs.193235 NM_006650 ENSG00000145920 CPLX2 921-L|CPX-2|CPX2|Hfb1 complexin 2 protein-coding chr2-1600 chr2 8229707 8229951 + 14.4 0.000 intron (NR_152741, intron 9 of 9) ERV3-16A3_LTR|LTR|ERVL 98590 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr3-1255 chr3 42880854 42881098 + 14.4 0.000 Intergenic CpG -5097 NM_004391 1582 Hs.447793 NM_004391 ENSG00000180432 CYP8B1 CP8B|CYP12 cytochrome P450 family 8 subfamily B member 1 protein-coding chr17-1291 chr17 35587391 35587635 + 14.4 0.000 intron (NM_001030006, intron 1 of 21) intron (NM_001030006, intron 1 of 21) 191 NM_001282 163 Hs.514819 NM_001282 ENSG00000006125 AP2B1 ADTB2|AP105B|AP2-BETA|CLAPB1 adaptor related protein complex 2 subunit beta 1 protein-coding chr7-969 chr7 73544473 73544717 + 14.4 0.000 intron (NM_001707, intron 2 of 5) AluSx|SINE|Alu 12641 NR_036682 9275 Hs.647051 NM_001707 ENSG00000106635 BCL7B - BAF chromatin remodeling complex subunit BCL7B protein-coding chr2-1313 chr2 144705551 144705795 + 14.4 0.000 intron (NR_033870, intron 1 of 4) intron (NR_033870, intron 1 of 4) 37706 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA chr4-637 chr4 880185 880429 + 14.4 0.000 intron (NM_005255, intron 15 of 27) intron (NM_005255, intron 15 of 27) 52009 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr4-980 chr4 56026386 56026630 + 14.4 0.000 intron (NM_025009, intron 25 of 25) L1ME3A|LINE|L1 77563 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr18-329 chr18 39376035 39376279 + 14.4 0.000 intron (NR_024391, intron 3 of 3) L1MCa|LINE|L1 246018 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr11-1623 chr11 95339456 95339700 + 14.4 0.000 Intergenic Intergenic -107103 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding chr11-1453 chr11 35111051 35111295 + 14.4 0.000 Intergenic Intergenic 26859 NR_120528 100507144 Hs.673491 NR_120528 ENSG00000255521 LOC100507144 - uncharacterized LOC100507144 ncRNA chr17-576 chr17 82333439 82333683 + 14.4 0.000 intron (NM_003004, intron 1 of 4) CpG 205 NM_003004 6398 Hs.558009 NM_003004 ENSG00000141574 SECTM1 K12|SECTM secreted and transmembrane 1 protein-coding chr22-375 chr22 22683400 22683644 + 14.4 0.000 Intergenic Intergenic 37210 NM_199127 91227 Hs.450000 NM_080839 ENSG00000100121 GGTLC2 GGTL4 gamma-glutamyltransferase light chain 2 protein-coding chr5-1008 chr5 34450520 34450764 + 14.4 0.000 Intergenic MER70C|LTR|ERVL -205686 NM_015577 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding chr17-329 chr17 2387375 2387619 + 14.4 0.000 exon (NM_020310, exon 6 of 6) exon (NM_020310, exon 6 of 6) 13563 NM_020310 4335 Hs.626579 NM_020310 ENSG00000070444 MNT MAD6|MXD6|ROX|bHLHd3 MAX network transcriptional repressor protein-coding chr7-1136 chr7 101018581 101018825 + 14.4 0.000 3' UTR (NM_001164462, exon 12 of 12) 3' UTR (NM_001164462, exon 12 of 12) -1095 NR_120519 102724094 Hs.571256 NR_120519 ENSG00000227053 LOC102724094 - uncharacterized LOC102724094 ncRNA chr7-1371 chr7 102472742 102472986 + 14.4 0.000 TTS (NM_006234) TTS (NM_006234) 1395 NR_039677 100616367 NR_039677 ENSG00000284596 MIR4467 - microRNA 4467 ncRNA chr20-643 chr20 58297384 58297628 + 14.4 0.000 intron (NR_003505, intron 2 of 16) intron (NR_003505, intron 2 of 16) 11933 NR_003505 55370 Hs.473179 NM_018498 PPP4R1L C20orf192|PPP4R1P1|PRO1085 protein phosphatase 4 regulatory subunit 1 like (pseudogene) pseudo chr22-747 chr22 50182888 50183132 + 14.4 0.000 Intergenic Intergenic -2903 NR_135275 80305 Hs.517731 NM_025204 ENSG00000170638 TRABD LP6054|PP2447 TraB domain containing protein-coding chr10-1130 chr10 33009043 33009287 + 14.4 0.000 Intergenic Intergenic -50935 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding chr7-697 chr7 6974971 6975215 + 14.4 0.000 Intergenic SVA_D|Retroposon|SVA 91952 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA chr22-369 chr22 20391889 20392133 + 14.4 0.000 Intergenic LTR12C|LTR|ERV1 -2104 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding chr2-1931 chr2 218035525 218035769 + 14.4 0.000 intron (NR_034176, intron 2 of 13) MIR3|SINE|MIR 713 NR_034176 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding chr7-998 chr7 100868397 100868641 + 14.4 0.000 TTS (NR_106935) TTS (NR_106935) 483 NR_106935 102466755 NR_106935 ENSG00000283821 MIR6875 hsa-mir-6875 microRNA 6875 ncRNA chr1-1190 chr1 146035616 146035860 + 14.4 0.000 Intergenic tRNA-Glu-GAG_|tRNA|tRNA -13916 NM_213653 148738 Hs.632436 NM_145277 ENSG00000168509 HJV HFE2|HFE2A|JH|RGMC hemojuvelin BMP co-receptor protein-coding chr22-705 chr22 40854144 40854388 + 14.4 0.000 intron (NM_003932, intron 1 of 11) intron (NM_003932, intron 1 of 11) 2373 NM_003932 6767 Hs.712713 NM_003932 ENSG00000100380 ST13 AAG2|FAM10A1|FAM10A4|HIP|HOP|HSPABP|HSPABP1|P48|PRO0786|SNC6 ST13 Hsp70 interacting protein protein-coding chr1-1902 chr1 203340261 203340505 + 14.4 0.000 TTS (NM_002023) TTS (NM_002023) 10739 NM_002023 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr11-1572 chr11 72025399 72025643 + 14.4 0.000 intron (NR_104476, intron 4 of 24) intron (NR_104476, intron 4 of 24) 11230 NR_104178 100128494 Hs.713607 NR_104178 ENSG00000251143 LOC100128494 - uncharacterized LOC100128494 ncRNA chr4-620 chr4 145619127 145619371 + 14.4 0.000 promoter-TSS (NM_172250) promoter-TSS (NM_172250) -136 NM_172250 166785 Hs.452864 NM_172250 ENSG00000151611 MMAA cblA metabolism of cobalamin associated A protein-coding chr3-1063 chr3 184168395 184168639 + 14.4 0.000 intron (NM_004423, intron 13 of 14) intron (NM_004423, intron 13 of 14) -6329 NM_001025205 1173 Hs.518460 NM_004068 ENSG00000161203 AP2M1 AP50|CLAPM1|mu2 adaptor related protein complex 2 subunit mu 1 protein-coding chr11-1364 chr11 124718056 124718300 + 14.4 0.000 Intergenic Intergenic -21764 NM_001126181 4900 Hs.524116 NM_006176 ENSG00000154146 NRGN RC3|hng neurogranin protein-coding chr3-979 chr3 69012362 69012606 + 14.4 0.000 intron (NR_103826, intron 2 of 15) intron (NR_103826, intron 2 of 15) 1200 NR_103826 285203 Hs.518059 NM_173654 ENSG00000163378 EOGT AER61|AOS4|C3orf64|EOGT1 EGF domain specific O-linked N-acetylglucosamine transferase protein-coding chr10-1023 chr10 85666687 85666931 + 14.4 0.000 intron (NM_017551, intron 12 of 15) L2b|LINE|L2 89078 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr1-2592 chr1 196856199 196856443 + 14.4 0.000 Intergenic L1PA17|LINE|L1 -31731 NM_001201550 10877 Hs.710100 NM_006684 ENSG00000134365 CFHR4 CFHL4|FHR-4|FHR4 complement factor H related 4 protein-coding chr3-1292 chr3 50218372 50218616 + 14.4 0.000 intron (NM_006841, intron 12 of 15) intron (NM_006841, intron 12 of 15) -8574 NM_001282619 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr12-743 chr12 49040296 49040540 + 14.4 0.000 exon (NM_003482, exon 31 of 54) exon (NM_003482, exon 31 of 54) 14906 NM_003482 8085 Hs.731384 NM_003482 ENSG00000167548 KMT2D AAD10|ALR|CAGL114|KABUK1|KMS|MLL2|MLL4|TNRC21 lysine methyltransferase 2D protein-coding chr3-233 chr3 122794948 122795192 + 14.4 0.000 promoter-TSS (NM_032839) promoter-TSS (NM_032839) 1 NM_032839 84925 Hs.477346 NM_032839 ENSG00000138463 SLC49A4 DIRC2|RCC4 solute carrier family 49 member 4 protein-coding chr1-922 chr1 31386874 31387118 + 14.4 0.000 Intergenic Intergenic -13708 NM_001320996 2170 Hs.576372 NM_004102 ENSG00000121769 FABP3 FABP11|H-FABP|M-FABP|MDGI|O-FABP fatty acid binding protein 3 protein-coding chr6-419 chr6 133952069 133952313 + 14.4 0.000 promoter-TSS (NM_001253676) promoter-TSS (NM_001253676) 21 NM_001253676 9519 Hs.486507 NM_004865 ENSG00000028839 TBPL1 MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2 TATA-box binding protein like 1 protein-coding chr17-256 chr17 7549059 7549303 + 14.4 0.000 non-coding (NR_037146, exon 1 of 8) non-coding (NR_037146, exon 1 of 8) 123 NM_172089 407977 Hs.54673 NM_172089 ENSG00000248871 TNFSF12-TNFSF13 TWE-PRIL TNFSF12-TNFSF13 readthrough protein-coding chr1-664 chr1 205450199 205450443 + 14.4 0.000 intron (NR_103783, intron 1 of 1) intron (NR_103783, intron 1 of 1) -1923 NR_029893 442891 NR_029893 ENSG00000199059 MIR135B MIRN135B|mir-135b microRNA 135b ncRNA chr12-1100 chr12 49544504 49544748 + 14.4 0.000 intron (NM_012284, intron 7 of 14) intron (NM_012284, intron 7 of 14) 5596 NM_012284 23416 Hs.64064 NM_012284 ENSG00000135519 KCNH3 BEC1|ELK2|Kv12.2 potassium voltage-gated channel subfamily H member 3 protein-coding chr19-814 chr19 35900576 35900820 + 14.4 0.000 promoter-TSS (NM_001321831) promoter-TSS (NM_001321831) -36 NM_139239 84807 Hs.466531 NM_032721 ENSG00000167604 NFKBID IkBNS|IkappaBNS|TA-NFKBH NFKB inhibitor delta protein-coding chr1-2082 chr1 160284276 160284520 + 14.4 0.000 intron (NM_001193644, intron 1 of 7) intron (NM_001193644, intron 1 of 7) 753 NR_036492 5824 Hs.517232 NM_002857 ENSG00000162735 PEX19 D1S2223E|HK33|PBD12A|PMP1|PMPI|PXF|PXMP1 peroxisomal biogenesis factor 19 protein-coding chr16-769 chr16 740689 740933 + 14.2 0.000 intron (NM_001304799, intron 1 of 11) CpG 186 NM_022493 64428 Hs.513247 NM_022493 ENSG00000103245 CIAO3 HPRN|IOP1|LET1L|NAR1|NARFL|PRN cytosolic iron-sulfur assembly component 3 protein-coding chr8-955 chr8 126571263 126571507 + 14.2 0.000 Intergenic MIR|SINE|MIR -12907 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding chr20-640 chr20 57308653 57308897 + 14.2 0.000 Intergenic Intergenic 12816 NR_036219 100422883 NR_036219 ENSG00000266666 MIR4325 - microRNA 4325 ncRNA chr4-296 chr4 98495421 98495665 + 14.2 0.000 intron (NM_005723, intron 2 of 7) AluY|SINE|Alu 163068 NM_005723 10098 Hs.118118 NM_005723 ENSG00000168785 TSPAN5 NET-4|NET4|TM4SF9|TSPAN-5 tetraspanin 5 protein-coding chr22-628 chr22 23182657 23182901 + 14.2 0.000 intron (NM_004327, intron 1 of 22) intron (NM_004327, intron 1 of 22) 2270 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr19-1221 chr19 19109599 19109843 + 14.2 0.000 intron (NM_178526, intron 7 of 7) AluSx1|SINE|Alu 28757 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr1-1321 chr1 39087152 39087396 + 14.2 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 3107 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr8-968 chr8 130443709 130443953 + 14.2 0.000 promoter-TSS (NM_001362926) promoter-TSS (NM_001362926) -157 NM_001362925 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr8-580 chr8 123395893 123396137 + 14.2 0.000 intron (NM_014109, intron 1 of 27) CpG 432 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr22-741 chr22 49052101 49052345 + 14.2 0.000 Intergenic CpG 185453 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA chr10-791 chr10 14788766 14789010 + 14.2 0.000 Intergenic Intergenic -13991 NM_001282695 83641 Hs.446315 NM_031453 ENSG00000065809 FAM107B C10orf45|HITS family with sequence similarity 107 member B protein-coding chr20-136 chr20 6767616 6767860 + 14.2 0.000 promoter-TSS (NM_001200) promoter-TSS (NM_001200) 52 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr11-1069 chr11 14449296 14449540 + 14.2 0.000 Intergenic Intergenic 50440 NM_016451 1315 Hs.339278 NM_016451 ENSG00000129083 COPB1 COPB coatomer protein complex subunit beta 1 protein-coding chrX-457 chrX 49079996 49080240 + 14.2 0.000 promoter-TSS (NM_001029896) promoter-TSS (NM_001029896) -231 NM_001029896 11152 Hs.632807 NM_007075 ENSG00000196998 WDR45 JM5|NBIA4|NBIA5|WDRX1|WIPI-4|WIPI4 WD repeat domain 45 protein-coding chr20-555 chr20 23340633 23340877 + 14.2 0.000 Intergenic Intergenic -10036 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding chr10-848 chr10 68097080 68097324 + 14.2 0.000 Intergenic LFSINE_Vert|SINE|tRNA -8805 NR_045662 84665 Hs.55205 NM_032578 ENSG00000138347 MYPN CMD1DD|CMH22|MYOP|NEM11|RCM4 myopalladin protein-coding chr16-753 chr16 88383395 88383639 + 14.2 0.000 Intergenic CpG -43954 NM_001367624 84627 Hs.54925 NM_001127464 ENSG00000225614 ZNF469 BCS|BCS1 zinc finger protein 469 protein-coding chr17-1354 chr17 58190703 58190947 + 14.2 0.000 Intergenic Intergenic -1901 NM_000502 8288 Hs.279259 NM_000502 ENSG00000121053 EPX EPO|EPP|EPX-PEN|EPXD eosinophil peroxidase protein-coding GL000216.2-10 GL000216.2 152196 152440 + 14.2 0.000 NA NA NA NA chr19-905 chr19 691330 691574 + 14.2 0.000 intron (NM_001308209, intron 3 of 4) AluSx3|SINE|Alu 4000 NM_001308209 400668 Hs.245146 NM_214710 ENSG00000185198 PRSS57 NSP4|PRSSL1|UNQ782 serine protease 57 protein-coding chr3-1231 chr3 21326827 21327071 + 14.2 0.000 Intergenic Intergenic -78777 NR_002311 391518 Hs.543226 NR_002311 VENTXP7 HPX42|VENTX1 VENT homeobox pseudogene 7 pseudo chr2-510 chr2 127589418 127589662 + 14.2 0.000 intron (NM_001080527, intron 15 of 46) G-rich|Low_complexity|Low_complexity -18578 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA chr7-832 chr7 43482285 43482529 + 14.2 0.000 intron (NM_001287059, intron 15 of 27) intron (NM_001287059, intron 15 of 27) 40135 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA chr3-1308 chr3 53818838 53819082 + 14.2 0.000 exon (NM_018397, exon 8 of 9) exon (NM_018397, exon 8 of 9) 27459 NM_018397 55349 Hs.126688 NM_018397 ENSG00000016391 CHDH - choline dehydrogenase protein-coding chr17-753 chr17 25389795 25390039 + 14.2 0.000 Intergenic ALR/Alpha|Satellite|centr 1699324 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr2-1222 chr2 37781189 37781433 + 14.2 0.000 Intergenic Intergenic 48400 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr16-853 chr16 72818463 72818707 + 14.2 0.000 intron (NM_001164766, intron 4 of 8) intron (NM_001164766, intron 4 of 8) -153615 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA chr10-1179 chr10 70956249 70956493 + 14.2 0.000 TTS (NR_134313) TTS (NR_134313) 17318 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr6-607 chr6 79947040 79947284 + 14.2 0.000 intron (NM_022726, intron 1 of 5) CpG 391 NM_022726 6785 Hs.101915 NM_022726 ENSG00000118402 ELOVL4 ADMD|CT118|ISQMR|SCA34|STGD2|STGD3 ELOVL fatty acid elongase 4 protein-coding chr19-1160 chr19 3648637 3648881 + 14.2 0.000 intron (NM_001195733, intron 8 of 16) CpG-13312 -21944 NM_021231 58509 Hs.128425 NM_021231 ENSG00000105298 CACTIN C19orf29|NY-REN-24|fSAPc cactin, spliceosome C complex subunit protein-coding chr3-416 chr3 159765067 159765311 + 14.2 0.000 TTS (NR_121669) TTS (NR_121669) 3423 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA chr9-1209 chr9 62897900 62898144 + 14.2 0.000 promoter-TSS (NR_122077) promoter-TSS (NR_122077) 65 NR_122077 403323 Hs.646340 NM_203449 LOC403323 - uncharacterized LOC403323 ncRNA chr9-423 chr9 62838374 62838618 + 14.2 0.000 promoter-TSS (NR_135128) promoter-TSS (NR_135128) 51 NR_024496 442421 Hs.585349 NR_024496 PTGER4P2-CDK2AP2P2 - PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene pseudo chr11-1313 chr11 64855540 64855784 + 14.2 0.000 intron (NM_006795, intron 3 of 4) intron (NM_006795, intron 3 of 4) -11009 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chrX-488 chrX 71532828 71533072 + 14.2 0.000 promoter-TSS (NM_181673) promoter-TSS (NM_181673) -154 NM_181673 8473 Hs.405410 NM_003605 ENSG00000147162 OGT HINCUT-1|HRNT1|MRX106|O-GLCNAC|OGT1 O-linked N-acetylglucosamine (GlcNAc) transferase protein-coding chr20-599 chr20 41003182 41003426 + 14.2 0.000 intron (NR_145525, intron 1 of 2) MLT1I|LTR|ERVL-MaLR 22591 NR_145524 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr19-942 chr19 11003537 11003781 + 14.2 0.000 intron (NM_001128845, intron 12 of 32) MER3|DNA|hAT-Charlie 19507 NM_001128846 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr1-1994 chr1 16009162 16009406 + 14.2 0.000 TTS (NM_178840) TTS (NM_178840) 5048 NM_178840 149563 Hs.29190 NM_178840 ENSG00000183888 SRARP C1orf64|ERRF steroid receptor associated and regulated protein protein-coding chr9-1107 chr9 121298665 121298909 + 14.2 0.000 promoter-TSS (NM_001353077) promoter-TSS (NM_001353077) -649 NM_001353075 2934 Hs.522373 NM_000177 ENSG00000148180 GSN ADF|AGEL gelsolin protein-coding chr3-814 chr3 7029189 7029433 + 14.2 0.000 intron (NM_000844, intron 1 of 9) AluSx|SINE|Alu -135294 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA chr16-96 chr16 34063828 34064072 + 14.2 0.000 Intergenic Intergenic -99628 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr4-821 chr4 70839799 70840043 + 14.2 0.000 promoter-TSS (NM_002092) promoter-TSS (NM_002092) -31 NM_002092 2926 Hs.309763 NM_002092 ENSG00000132463 GRSF1 - G-rich RNA sequence binding factor 1 protein-coding chr19-1153 chr19 2271765 2272009 + 14.2 0.000 exon (NM_001301020, exon 3 of 5) exon (NM_001301020, exon 3 of 5) 2401 NM_004152 4946 Hs.446427 NM_004152 ENSG00000104904 OAZ1 AZ1|AZI|OAZ ornithine decarboxylase antizyme 1 protein-coding chr21-227 chr21 30227628 30227872 + 14.2 0.000 Intergenic Intergenic -11653 NM_199328 9073 Hs.162209 NM_012132 ENSG00000156284 CLDN8 HEL-S-79 claudin 8 protein-coding chr17-623 chr17 43022206 43022450 + 14.2 0.000 promoter-TSS (NM_006373) promoter-TSS (NM_006373) 57 NM_006373 10493 Hs.514199 NM_006373 ENSG00000108828 VAT1 VATI vesicle amine transport 1 protein-coding chr12-1030 chr12 3107135 3107379 + 14.2 0.000 intron (NM_006675, intron 2 of 8) intron (NM_006675, intron 2 of 8) 29878 NM_006675 10867 Hs.504517 NM_006675 ENSG00000011105 TSPAN9 NET-5|NET5|PP1057 tetraspanin 9 protein-coding chrX-235 chrX 154443863 154444107 + 14.2 0.000 promoter-TSS (NM_004699) promoter-TSS (NM_004699) -156 NM_004699 9130 Hs.54277 NM_004699 ENSG00000071859 FAM50A 9F|DXS9928E|HXC-26|HXC26|XAP5 family with sequence similarity 50 member A protein-coding chr14-770 chr14 91332263 91332507 + 14.2 0.000 intron (NM_001080414, intron 10 of 29) intron (NM_001080414, intron 10 of 29) -78505 NM_003485 8111 Hs.8882 NM_003485 ENSG00000119714 GPR68 AI2A6|GPR12A|OGR1 G protein-coupled receptor 68 protein-coding chr12-936 chr12 13173433 13173677 + 14.2 0.000 Intergenic Intergenic -23171 NM_001423 2012 Hs.719042 NM_001423 ENSG00000134531 EMP1 CL-20|EMP-1|TMP epithelial membrane protein 1 protein-coding chr19-1528 chr19 13359078 13359322 + 14.2 0.000 intron (NM_023035, intron 6 of 46) MER115|DNA|hAT-Tip100 147260 NM_001127221 773 Hs.501632 NM_000068 ENSG00000141837 CACNA1A APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6 calcium voltage-gated channel subunit alpha1 A protein-coding chr19-1582 chr19 35449797 35450041 + 14.2 0.000 exon (NM_005306, exon 3 of 3) exon (NM_005306, exon 3 of 3) 1662 NM_005306 2867 Hs.248056 NM_005306 ENSG00000126262 FFAR2 FFA2R|GPR43 free fatty acid receptor 2 protein-coding chr1-1724 chr1 34904419 34904663 + 14.2 0.000 exon (NM_001080418, exon 3 of 12) exon (NM_001080418, exon 3 of 12) 25109 NM_001080418 58512 Hs.436393 NM_001080418 ENSG00000116544 DLGAP3 DAP3|SAPAP3 DLG associated protein 3 protein-coding chr9-673 chr9 98119140 98119384 + 14.2 0.000 promoter-TSS (NM_014788) promoter-TSS (NM_014788) -40 NM_014788 9830 Hs.575631 NM_014788 ENSG00000106785 TRIM14 - tripartite motif containing 14 protein-coding chr4-704 chr4 77076284 77076528 + 14.2 0.000 promoter-TSS (NM_001348132) promoter-TSS (NM_001348132) -417 NM_006835 10983 Hs.518827 NM_006835 ENSG00000118816 CCNI CCNI1|CYC1|CYI cyclin I protein-coding chr7-1237 chr7 24140053 24140297 + 14.2 0.000 Intergenic L2b|LINE|L2 -144015 NM_000905 4852 Hs.1832 NM_000905 ENSG00000122585 NPY PYY4 neuropeptide Y protein-coding chr1-2191 chr1 3283956 3284200 + 14.2 0.000 intron (NM_022114, intron 3 of 16) intron (NM_022114, intron 3 of 16) 156103 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr8-890 chr8 70061790 70062034 + 14.2 0.000 intron (NM_024504, intron 5 of 7) intron (NM_024504, intron 5 of 7) 9340 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr1-2522 chr1 155942419 155942663 + 14.2 0.000 exon (NM_181885, exon 1 of 1) exon (NM_181885, exon 1 of 1) 852 NM_181885 339403 Hs.449914 NM_181885 ENSG00000173080 RXFP4 GPCR142|GPR100|RLN3R2|RXFPR4 relaxin family peptide/INSL5 receptor 4 protein-coding chr1-1612 chr1 1245376 1245620 + 14.2 0.000 intron (NM_001014980, intron 1 of 7) intron (NM_001014980, intron 1 of 7) 1224 NM_001014980 388581 Hs.197613 NM_001014980 ENSG00000184163 C1QTNF12 C1QDC2|CTRP12|FAM132A C1q and TNF related 12 protein-coding chr19-976 chr19 32904461 32904705 + 14.2 0.000 intron (NM_032816, intron 14 of 18) intron (NM_032816, intron 14 of 18) -34816 NM_014270 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding chr8-241 chr8 104223200 104223444 + 14.2 0.000 promoter-TSS (NM_001282882) promoter-TSS (NM_001282882) -13 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding chr8-947 chr8 121614081 121614325 + 14.2 0.000 exon (NM_005328, exon 4 of 4) exon (NM_005328, exon 4 of 4) -25143 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA chr19-865 chr19 12484228 12484472 + 14.2 0.000 intron (NM_152601, intron 1 of 3) intron (NM_152601, intron 1 of 3) 466 NM_152601 163051 Hs.631623 NM_152601 ENSG00000242852 ZNF709 - zinc finger protein 709 protein-coding chr19-1565 chr19 27740838 27741082 + 14.2 0.000 Intergenic HSAT4|Satellite|centr -52471 NR_146733 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA chr2-1005 chr2 178756942 178757186 + 14.2 0.000 intron (NM_133437, intron 43 of 191) intron (NM_133437, intron 43 of 191) -19862 NR_120594 101927055 Hs.570275 NR_120594 ENSG00000237298 LOC101927055 - uncharacterized LOC101927055 ncRNA chr13-361 chr13 109424197 109424441 + 14.2 0.000 Intergenic Intergenic 23623 NR_126361 104326054 Hs.569298 NR_126361 ENSG00000229792 LINC00399 TCONS_00021596 long intergenic non-protein coding RNA 399 ncRNA chr11-1054 chr11 3088431 3088675 + 14.2 0.000 intron (NM_020896, intron 21 of 21) intron (NM_020896, intron 21 of 21) -31130 NM_139273 833 Hs.274873 NM_001751 ENSG00000110619 CARS CARS1|CYSRS|MGC:11246 cysteinyl-tRNA synthetase protein-coding chr19-1435 chr19 1970964 1971208 + 14.2 0.000 intron (NM_001319, intron 2 of 11) MIR1_Amn|SINE|MIR -16537 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr2-245 chr2 48111664 48111908 + 14.2 0.000 Intergenic Intergenic -202896 NM_002158 3344 Hs.468478 NM_002158 ENSG00000170802 FOXN2 HTLF forkhead box N2 protein-coding chr16-543 chr16 75523568 75523812 + 14.2 0.000 Intergenic AluSz6|SINE|Alu 11480 NM_024533 23563 Hs.745424 NM_012126 ENSG00000135702 CHST5 I-GlcNAc-6-ST|I-GlcNAc6ST|glcNAc6ST-3|gn6st-3|hIGn6ST carbohydrate sulfotransferase 5 protein-coding chr8-1010 chr8 144052706 144052950 + 14.2 0.000 exon (NM_017570, exon 22 of 27) exon (NM_017570, exon 22 of 27) 3430 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr15-757 chr15 100902529 100902773 + 14.2 0.000 intron (NM_000693, intron 9 of 12) intron (NM_000693, intron 9 of 12) 16632 NR_135828 101927751 Hs.659224 NR_135827 ENSG00000259583 LOC101927751 - uncharacterized LOC101927751 ncRNA chr22-677 chr22 37746351 37746595 + 14.2 0.000 promoter-TSS (NR_160696) promoter-TSS (NR_160696) 239 NM_007032 11078 Hs.533030 NM_007032 ENSG00000100106 TRIOBP DFNB28|HRIHFB2122|TAP68|TARA|dJ37E16.4 TRIO and F-actin binding protein protein-coding chrX-421 chrX 15947307 15947551 + 14.2 0.000 Intergenic LTR16A1|LTR|ERVL -92616 NM_001369007 8905 Hs.121592 NM_003916 ENSG00000182287 AP1S2 DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B adaptor related protein complex 1 subunit sigma 2 protein-coding chr19-1255 chr19 42376499 42376743 + 14.2 0.000 exon (NM_001410, exon 41 of 41) exon (NM_001410, exon 41 of 41) 13676 NM_032488 84518 Hs.148590 NM_032488 ENSG00000105427 CNFN PLAC8L2 cornifelin protein-coding chr3-1446 chr3 156388616 156388860 + 14.2 0.000 intron (NM_172159, intron 1 of 13) intron (NM_172159, intron 1 of 13) 58198 NR_046618 100874084 Hs.131282 NR_046618 ENSG00000242370 KCNAB1-AS1 - KCNAB1 antisense RNA 1 ncRNA chr1-2408 chr1 67053749 67053993 + 14.2 0.000 exon (NM_015139, exon 1 of 12) exon (NM_015139, exon 1 of 12) 277 NM_015139 23169 Hs.213642 NM_015139 ENSG00000116704 SLC35D1 SHNKND|UGTREL7 solute carrier family 35 member D1 protein-coding chr3-203 chr3 70956609 70956853 + 14.2 0.000 non-coding (NR_146143, exon 20 of 20) non-coding (NR_146143, exon 20 of 20) 108193 NM_001349344 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding chr7-608 chr7 1415998 1416242 + 14.2 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat 43350 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr16-695 chr16 697187 697431 + 14.2 0.000 exon (NM_153350, exon 2 of 6) exon (NM_153350, exon 2 of 6) -6911 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr12-808 chr12 15789251 15789495 + 14.2 0.000 promoter-TSS (NM_004447) promoter-TSS (NM_004447) 15 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding chr16-1110 chr16 49622894 49623138 + 14.2 0.000 intron (NM_001271620, intron 5 of 7) intron (NM_001271620, intron 5 of 7) 41308 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr7-1134 chr7 100489789 100490033 + 14.2 0.000 intron (NM_173564, intron 4 of 6) (GCCCT)n|Simple_repeat|Simple_repeat 5984 NM_173564 222950 Hs.320086 NM_173564 ENSG00000166924 NYAP1 C7orf51 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 protein-coding chr8-688 chr8 130948673 130948917 + 14.2 0.000 intron (NM_001115, intron 3 of 17) intron (NM_001115, intron 3 of 17) 92114 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding chr16-855 chr16 73202470 73202714 + 14.2 0.000 Intergenic Intergenic -58145 NM_207385 388289 Hs.371893 NM_207385 C16orf47 - chromosome 16 open reading frame 47 protein-coding chr18-288 chr18 76619926 76620170 + 14.2 0.000 non-coding (NR_120419, exon 1 of 2) non-coding (NR_120419, exon 1 of 2) 271 NR_120419 400660 Hs.131718 NR_120419 ENSG00000266256 LINC00683 - long intergenic non-protein coding RNA 683 ncRNA chr21-137 chr21 44284724 44284968 + 14.2 0.000 Intergenic Intergenic -1030 NM_000383 326 Hs.129829 NM_000383 ENSG00000160224 AIRE AIRE1|APECED|APS1|APSI|PGA1 autoimmune regulator protein-coding chr3-679 chr3 157160795 157161039 + 14.2 0.000 promoter-TSS (NM_020307) promoter-TSS (NM_020307) -157 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr6-580 chr6 3075618 3075862 + 14.2 0.000 intron (NM_001317061, intron 2 of 12) L1MEd|LINE|L1 7246 NM_001354933 8737 Hs.519842 NM_003804 ENSG00000137275 RIPK1 IMD57|RIP|RIP-1|RIP1 receptor interacting serine/threonine kinase 1 protein-coding chr3-1453 chr3 158847564 158847808 + 14.2 0.000 Intergenic LTR16E2|LTR|ERVL 45632 NM_001289406 64747 Hs.58663 NM_022736 ENSG00000118855 MFSD1 SMAP4 major facilitator superfamily domain containing 1 protein-coding chr15-559 chr15 50024307 50024551 + 14.2 0.000 intron (NR_073596, intron 6 of 27) intron (NR_073596, intron 6 of 27) 88950 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding chr6-1013 chr6 75493699 75493943 + 14.2 0.000 promoter-TSS (NR_110608) promoter-TSS (NR_110608) -21 NM_001300866 27145 Hs.201488 NM_015687 ENSG00000118407 FILIP1 FILIP filamin A interacting protein 1 protein-coding chr6-1010 chr6 75171633 75171877 + 14.2 0.000 intron (NM_004370, intron 13 of 65) intron (NM_004370, intron 13 of 65) 34298 NM_080645 1303 Hs.101302 NM_004370 ENSG00000111799 COL12A1 BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|EDSMYP|UCMD2 collagen type XII alpha 1 chain protein-coding chr17-1142 chr17 44119165 44119409 + 14.2 0.000 intron (NM_001015053, intron 1 of 26) intron (NM_001015053, intron 1 of 26) 3375 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr1-1568 chr1 178773666 178773910 + 14.2 0.000 intron (NM_152663, intron 1 of 19) AluY|SINE|Alu 48544 NM_152663 55103 Hs.632485 NM_018037 ENSG00000116191 RALGPS2 dJ595C2.1 Ral GEF with PH domain and SH3 binding motif 2 protein-coding chr1-1441 chr1 217089518 217089762 + 14.2 0.000 promoter-TSS (NM_001243506) promoter-TSS (NM_001243506) 5 NM_206594 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding chrX-261 chrX 102550103 102550347 + 14.2 0.000 intron (NR_002216, intron 1 of 16) intron (NR_002216, intron 1 of 16) 260 NR_002216 55999 Hs.454283 NR_002216 ENSG00000196970 NXF4 - nuclear RNA export factor 4 pseudogene pseudo chr5-997 chr5 25722142 25722386 + 14.2 0.000 Intergenic MSTA|LTR|ERVL-MaLR 531311 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA chr1-2199 chr1 6253764 6254008 + 14.2 0.000 exon (NM_207370, exon 3 of 6) exon (NM_207370, exon 3 of 6) 7212 NM_207370 387509 Hs.531581 NM_207370 ENSG00000158292 GPR153 PGR1 G protein-coupled receptor 153 protein-coding chr16-964 chr16 75267763 75268007 + 14.2 0.000 promoter-TSS (NM_001170716).2 promoter-TSS (NM_001170716).2 122 NM_001170715 9564 Hs.479747 NM_014567 ENSG00000050820 BCAR1 CAS|CAS1|CASS1|CRKAS|P130Cas BCAR1 scaffold protein, Cas family member protein-coding chr17-1171 chr17 76018548 76018792 + 14.2 0.000 intron (NM_001988, intron 11 of 21) intron (NM_001988, intron 11 of 21) 8636 NM_001320747 2125 Hs.500635 NM_001988 ENSG00000167880 EVPL EVPK envoplakin protein-coding chr21-139 chr21 45490728 45490972 + 14.2 0.000 exon (NM_130444, exon 20 of 42) exon (NM_130444, exon 20 of 42) 12584 NR_106873 102465489 NR_106873 ENSG00000275167 MIR6815 hsa-mir-6815 microRNA 6815 ncRNA chr15-544 chr15 39934526 39934770 + 14.2 0.000 intron (NM_001013703, intron 1 of 38) intron (NM_001013703, intron 1 of 38) 533 NM_001013703 440275 Hs.656673 NM_001013703 ENSG00000128829 EIF2AK4 GCN2|PVOD2 eukaryotic translation initiation factor 2 alpha kinase 4 protein-coding chr16-828 chr16 57759007 57759251 + 14.2 0.000 3' UTR (NM_001318710, exon 19 of 20) 3' UTR (NM_001318710, exon 19 of 20) 13223 NR_106830 102465463 NR_106830 ENSG00000274816 MIR6772 hsa-mir-6772 microRNA 6772 ncRNA chr9-1306 chr9 120443589 120443833 + 14.2 0.000 exon (NM_018249, exon 23 of 38) exon (NM_018249, exon 23 of 38) 136456 NR_073557 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr3-1118 chr3 49902965 49903209 + 14.2 0.000 exon (NM_002447, exon 1 of 20) exon (NM_002447, exon 1 of 20) 550 NM_001318913 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr7-104 chr7 94297449 94297693 + 14.2 0.000 Intergenic Intergenic 94621 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA chr11-1612 chr11 85346051 85346295 + 14.2 0.000 intron (NM_001142699, intron 3 of 27) MER41C|LTR|ERV1 281097 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding chr17-1137 chr17 42342770 42343014 + 14.2 0.000 intron (NM_001369512, intron 4 of 23) L2c|LINE|L2 45550 NM_001369513 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chrX-539 chrX 129690409 129690653 + 14.2 0.000 Intergenic Intergenic -35575 NM_017413 8862 Hs.303084 NM_017413 ENSG00000171388 APLN APEL|XNPEP2 apelin protein-coding chr2-1477 chr2 61810267 61810511 + 14.2 0.000 Intergenic LTR16E1|LTR|ERVL 43671 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr3-1152 chr3 127971261 127971505 + 14.2 0.000 intron (NM_001370224, intron 5 of 6) MamGypLTR1b|LTR|Gypsy 56151 NM_001370224 166348 Hs.132087 NM_207335 ENSG00000187715 KBTBD12 KLHDC6 kelch repeat and BTB domain containing 12 protein-coding chr2-1721 chr2 66434966 66435210 + 14.2 0.000 promoter-TSS (NM_002398) promoter-TSS (NM_002398) -37 NM_002398 4211 Hs.526754 NM_002398 ENSG00000143995 MEIS1 - Meis homeobox 1 protein-coding chr13-475 chr13 56099101 56099345 + 14.1 0.000 Intergenic MSTB-int|LTR|ERVL-MaLR 924769 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr6-230 chr6 117482862 117483106 + 14.1 0.000 intron (NM_173674, intron 1 of 14) CpG 310 NR_158983 285761 Hs.658304 NM_173674 ENSG00000164465 DCBLD1 dJ94G16.1 discoidin, CUB and LCCL domain containing 1 protein-coding chr4-834 chr4 123235412 123235656 + 14.1 0.000 intron (NM_001345856, intron 14 of 15) intron (NM_001345856, intron 14 of 15) -161261 NM_199327 10252 Hs.744854 NM_005841 ENSG00000164056 SPRY1 hSPRY1 sprouty RTK signaling antagonist 1 protein-coding chr11-405 chr11 130448437 130448681 + 14.1 0.000 promoter-TSS (NM_139055) promoter-TSS (NM_139055) -415 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding chr12-788 chr12 132084924 132085168 + 14.1 0.000 intron (NR_003290, intron 1 of 9) CpG 763 NR_003290 347918 Hs.122115 NM_182613 ENSG00000185684 EP400P1 EP400NL EP400 pseudogene 1 pseudo chr8-505 chr8 84856987 84857231 + 14.1 0.000 intron (NM_001287244, intron 4 of 7) intron (NM_001287244, intron 4 of 7) 151182 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding chr17-1018 chr17 62653898 62654142 + 14.1 0.000 intron (NM_006039, intron 1 of 29) intron (NM_006039, intron 1 of 29) 26350 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding chr14-290 chr14 35404512 35404756 + 14.1 0.000 exon (NM_020529, exon 1 of 6) exon (NM_020529, exon 1 of 6) 120 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr11-1296 chr11 61769478 61769722 + 14.1 0.000 intron (NM_013279, intron 4 of 25) intron (NM_013279, intron 4 of 25) -11936 NR_026882 26070 Hs.564254 NR_026882 ENSG00000124915 MYRF-AS1 DKFZP434K028 MYRF antisense RNA 1 ncRNA chr6-462 chr6 56347539 56347783 + 14.1 0.000 intron (NM_001318752, intron 1 of 28) MER5B|DNA|hAT-Charlie 46467 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding chr20-608 chr20 45061361 45061605 + 14.1 0.000 intron (NM_001352385, intron 11 of 11) Tigger7|DNA|TcMar-Tigger 39644 NM_002251 3787 Hs.117780 NM_002251 ENSG00000124134 KCNS1 Kv9.1 potassium voltage-gated channel modifier subfamily S member 1 protein-coding chr21-143 chr21 9246853 9247097 + 14.1 0.000 Intergenic Intergenic -117214 NR_038327 100132288 Hs.487562 NM_174948 ENSG00000188681 TEKT4P2 MAFIPL|TEKT4P tektin 4 pseudogene 2 pseudo chr16-868 chr16 84617397 84617641 + 14.1 0.000 exon (NM_021149, exon 2 of 4) exon (NM_021149, exon 2 of 4) 559 NM_021149 23406 Hs.289092 NM_021149 ENSG00000103187 COTL1 CLP coactosin like F-actin binding protein 1 protein-coding chr16-1144 chr16 66717246 66717490 + 14.1 0.000 Intergenic Intergenic -20625 NM_181521 146223 Hs.643961 NM_178818 ENSG00000183723 CMTM4 CKLFSF4 CKLF like MARVEL transmembrane domain containing 4 protein-coding chr2-1816 chr2 127124000 127124244 + 14.1 0.000 Intergenic AluSq2|SINE|Alu -16968 NM_139348 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr3-607 chr3 127377735 127377979 + 14.1 0.000 intron (NR_110147, intron 1 of 4) MIRb|SINE|MIR 12813 NR_110147 101927123 Hs.526761 NR_110147 ENSG00000244215 LINC02016 - long intergenic non-protein coding RNA 2016 ncRNA chr19-566 chr19 1315796 1316040 + 14.1 0.000 Intergenic CpG 30045 NM_001405 1943 NM_001405 ENSG00000099617 EFNA2 ELF-1|EPLG6|HEK7-L|LERK-6|LERK6 ephrin A2 protein-coding chrX-290 chrX 40094956 40095200 + 14.1 0.000 intron (NM_001123384, intron 1 of 13) CpG 2388 NM_001123385 54880 Hs.659681 NM_017745 ENSG00000183337 BCOR ANOP2|MAA2|MCOPS2 BCL6 corepressor protein-coding chr17-950 chr17 28536422 28536666 + 14.1 0.000 intron (NM_001369369, intron 8 of 8) intron (NM_001369369, intron 8 of 8) 12603 NM_003593 8456 Hs.58611 NM_003593 ENSG00000109101 FOXN1 FKHL20|RONU|WHN forkhead box N1 protein-coding chr4-284 chr4 2764183 2764427 + 14.1 0.000 Intergenic CpG -7969 NM_024309 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr8-917 chr8 96444442 96444686 + 14.1 0.000 Intergenic Intergenic -49249 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr8-472 chr8 22214416 22214660 + 14.1 0.000 Intergenic Intergenic 17561 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr10-753 chr10 105575917 105576161 + 14.1 0.000 Intergenic L1PA11|LINE|L1 244294 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA chr6-977 chr6 43495499 43495743 + 14.1 0.000 intron (NM_001350567, intron 2 of 10) intron (NM_001350567, intron 2 of 10) 5863 NM_001350566 93643 Hs.520145 NM_080604 ENSG00000137221 TJAP1 PILT|TJP4 tight junction associated protein 1 protein-coding chr5-1062 chr5 77972614 77972858 + 14.1 0.000 Intergenic CpG 14489 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr1-1991 chr1 12184123 12184367 + 14.1 0.000 intron (NM_001066, intron 1 of 9) intron (NM_001066, intron 1 of 9) -7468 NR_039775 100616438 NR_039775 ENSG00000263676 MIR4632 - microRNA 4632 ncRNA chr11-1015 chr11 73389276 73389520 + 14.1 0.000 intron (NM_152222, intron 2 of 10) intron (NM_152222, intron 2 of 10) 12730 NM_032871 84957 Hs.533720 NM_032871 ENSG00000054967 RELT AI3C|TNFRSF19L|TRLT RELT TNF receptor protein-coding chr1-1525 chr1 77508786 77509030 + 14.1 0.000 intron (NM_012093, intron 10 of 13) MLT1I|LTR|ERVL-MaLR 173750 NM_015534 26009 Hs.480506 NM_015534 ENSG00000036549 ZZZ3 ATAC1 zinc finger ZZ-type containing 3 protein-coding chr7-875 chr7 951642 951886 + 14.1 0.000 intron (NM_001284308, intron 1 of 10) intron (NM_001284308, intron 1 of 10) 2916 NM_006869 11033 Hs.602573 NM_006869 ENSG00000105963 ADAP1 CENTA1|GCS1L|p42IP4 ArfGAP with dual PH domains 1 protein-coding chr22-711 chr22 42978387 42978631 + 14.1 0.000 intron (NM_001184970, intron 1 of 10) MIRb|SINE|MIR -18173 NM_001349970 11252 Hs.162877 NM_007229 ENSG00000100266 PACSIN2 SDPII protein kinase C and casein kinase substrate in neurons 2 protein-coding chr5-1109 chr5 133428346 133428590 + 14.1 0.000 promoter-TSS (NR_031621) promoter-TSS (NR_031621) -762 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA chr8-275 chr8 143262030 143262274 + 14.1 0.000 3' UTR (NM_173832, exon 3 of 3) 3' UTR (NM_173832, exon 3 of 3) -5293 NM_138465 2738 Hs.400533 NM_138465 ENSG00000250571 GLI4 HKR4|ZNF928 GLI family zinc finger 4 protein-coding chr2-1718 chr2 64212388 64212632 + 14.1 0.000 Intergenic AluJr4|SINE|Alu -7025 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA chr5-1112 chr5 133655019 133655263 + 14.1 0.000 Intergenic L2|LINE|L2 -42600 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding GL000225.1-47 GL000225.1 140555 140799 + 14.1 0.000 NA NA NA NA chr8-703 chr8 142340459 142340703 + 14.1 0.000 intron (NM_001291931, intron 2 of 10) L1MB7|LINE|L1 62601 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding chr11-1421 chr11 10692817 10693061 + 14.1 0.000 intron (NM_001100163, intron 1 of 20) intron (NM_001100163, intron 1 of 20) 635 NM_001100167 10335 Hs.501898 NM_130385 ENSG00000072952 MRVI1 IRAG|JAW1L murine retrovirus integration site 1 homolog protein-coding chr14-263 chr14 59685876 59686120 + 14.1 0.000 intron (NM_021136, intron 3 of 8) L1M2|LINE|L1 -38978 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA chr5-1106 chr5 132496850 132497094 + 14.1 0.000 Intergenic CpG -6199 NM_001354925 3659 Hs.436061 NM_002198 ENSG00000125347 IRF1 IRF-1|MAR interferon regulatory factor 1 protein-coding chr14-525 chr14 49852050 49852294 + 14.1 0.000 intron (NM_001301732, intron 1 of 31) intron (NM_001301732, intron 1 of 31) 616 NM_004713 9147 Hs.655964 NM_004713 ENSG00000165525 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding chr22-663 chr22 35154970 35155214 + 14.1 0.000 intron (NR_126356, intron 4 of 5) intron (NR_126356, intron 4 of 5) 75964 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA chr1-2119 chr1 212477119 212477363 + 14.1 0.000 Intergenic Intergenic 44321 NM_013349 29937 Hs.461787 NM_013349 ENSG00000117691 NENF CIR2|SCIRP10|SPUF neudesin neurotrophic factor protein-coding chr17-537 chr17 2090115 2090359 + 14.1 0.000 intron (NM_001256827, intron 6 of 11) intron (NM_001256827, intron 6 of 11) -1476 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr7-1019 chr7 128359750 128359994 + 14.1 0.000 exon (NM_001114726, exon 2 of 6) exon (NM_001114726, exon 2 of 6) 1813 NM_001174164 401399 Hs.381096 NM_001114726 ENSG00000224940 PRRT4 - proline rich transmembrane protein 4 protein-coding chr12-1170 chr12 82716232 82716476 + 14.1 0.000 intron (NM_001320321, intron 1 of 10) intron (NM_001320321, intron 1 of 10) 29199 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding chr20-508 chr20 61415507 61415751 + 14.1 0.000 intron (NM_001794, intron 2 of 15) L1MB3|LINE|L1 -83792 NM_001252338 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr1-1382 chr1 116909894 116910138 + 14.1 0.000 promoter-TSS (NM_020440) promoter-TSS (NM_020440) 100 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr7-799 chr7 550362 550606 + 14.1 0.000 exon (NM_001164761, exon 11 of 11) exon (NM_001164761, exon 11 of 11) -11474 NR_132384 101927000 Hs.551793 NR_132384 ENSG00000229380 LOC101927000 - uncharacterized LOC101927000 ncRNA chr9-698 chr9 128055321 128055565 + 14.1 0.000 Intergenic Intergenic 11877 NM_197956 203245 Hs.373606 NM_197956 ENSG00000171169 NAIF1 C9orf90|bA379C10.2 nuclear apoptosis inducing factor 1 protein-coding chr2-847 chr2 73110769 73111013 + 14.1 0.000 intron (NM_001371272, intron 1 of 5) intron (NM_001371272, intron 1 of 5) 2057 NM_015470 26056 Hs.24557 NM_015470 ENSG00000135631 RAB11FIP5 GAF1|RIP11|pp75 RAB11 family interacting protein 5 protein-coding chr7-498 chr7 2668525 2668769 + 14.1 0.000 Intergenic L2a|LINE|L2 -10875 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr5-1114 chr5 133831631 133831875 + 14.1 0.000 Intergenic Intergenic -81924 NR_131252 105664404 Hs.582536 NR_131252 ENSG00000249073 WSPAR LncTCF7|TCONS_00009511 WNT signaling pathway activating non-coding RNA ncRNA chr12-348 chr12 111697219 111697463 + 14.1 0.000 intron (NM_025247, intron 2 of 20) intron (NM_025247, intron 2 of 20) 11288 NM_001136538 80724 Hs.331141 NM_025247 ENSG00000111271 ACAD10 - acyl-CoA dehydrogenase family member 10 protein-coding chr3-1418 chr3 137046000 137046244 + 14.1 0.000 Intergenic AluJb|SINE|Alu 88139 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding chr1-2608 chr1 202318913 202319157 + 14.1 0.000 exon (NM_001017404, exon 16 of 16) exon (NM_001017404, exon 16 of 16) 22901 NM_014176 29089 Hs.5199 NM_014176 ENSG00000077152 UBE2T FANCT|HSPC150|PIG50 ubiquitin conjugating enzyme E2 T protein-coding chr17-370 chr17 38863441 38863685 + 14.1 0.000 Intergenic L2|LINE|L2 -6296 NM_001271608 3927 Hs.741156 NM_006148 ENSG00000002834 LASP1 Lasp-1|MLN50 LIM and SH3 protein 1 protein-coding chr4-879 chr4 1214696 1214940 + 14.1 0.000 intron (NM_001012614, intron 6 of 9) intron (NM_001012614, intron 6 of 9) 4698 NR_104331 285463 Hs.707614 NR_104331 ENSG00000280927 CTBP1-AS PCAT10 CTBP1 antisense RNA ncRNA chr6-969 chr6 41177244 41177488 + 14.1 0.000 Intergenic Intergenic -14180 NM_018965 54209 Hs.435295 NM_018965 ENSG00000095970 TREM2 PLOSL2|TREM-2|Trem2a|Trem2b|Trem2c triggering receptor expressed on myeloid cells 2 protein-coding chr12-1123 chr12 54116061 54116305 + 14.1 0.000 intron (NR_026655, intron 1 of 1) intron (NR_026655, intron 1 of 1) -9888 NR_026656 400043 Hs.19193 NR_026656 ENSG00000250742 LINC02381 - long intergenic non-protein coding RNA 2381 ncRNA chr7-1103 chr7 48381155 48381399 + 14.1 0.000 intron (NM_152701, intron 35 of 61) intron (NM_152701, intron 35 of 61) 209819 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding chr6-269 chr6 13814500 13814744 + 14.1 0.000 promoter-TSS (NM_001031713) promoter-TSS (NM_001031713) -62 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr19-1314 chr19 1656751 1656995 + 14.1 0.000 Intergenic Intergenic -4258 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr4-941 chr4 35131515 35131759 + 14.1 0.000 Intergenic AluSx|SINE|Alu -861890 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr19-888 chr19 46915713 46915957 + 14.1 0.000 intron (NM_004491, intron 1 of 6) intron (NM_004491, intron 1 of 6) 54838 NM_004491 2909 Hs.509447 NM_004491 ENSG00000160007 ARHGAP35 GRF-1|GRLF1|P190-A|P190A|p190ARhoGAP|p190RhoGAP Rho GTPase activating protein 35 protein-coding chr17-1055 chr17 78497168 78497412 + 14.1 0.000 intron (NR_102401, intron 5 of 5) intron (NR_102401, intron 5 of 5) 12380 NR_102401 100996295 Hs.615304 NR_102401 DNAH17-AS1 - DNAH17 antisense RNA 1 ncRNA chr1-2591 chr1 196608422 196608666 + 14.1 0.000 promoter-TSS (NM_198503) promoter-TSS (NM_198503) -104 NR_146057 343450 Hs.657046 NM_198503 ENSG00000162687 KCNT2 EIEE57|KCa4.2|SLICK|SLO2.1 potassium sodium-activated channel subfamily T member 2 protein-coding chr8-467 chr8 17156940 17157184 + 14.1 0.000 promoter-TSS (NM_001362988) promoter-TSS (NM_001362988) -102 NM_001362988 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding chr17-1159 chr17 59361504 59361748 + 14.1 0.000 intron (NM_001005404, intron 2 of 4) Charlie4z|DNA|hAT-Charlie -4457 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr9-475 chr9 75294720 75294964 + 14.1 0.000 Intergenic L1MA1|LINE|L1 206328 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding chr2-759 chr2 86140013 86140257 + 14.1 0.000 3' UTR (NM_017952, exon 24 of 24) 3' UTR (NM_017952, exon 24 of 24) 4265 NR_004378 692225 Hs.723087 NR_004378 ENSG00000208772 SNORD94 U94 small nucleolar RNA, C/D box 94 snoRNA chr11-1274 chr11 36500328 36500572 + 14.1 0.000 intron (NM_145803, intron 3 of 7) L2a|LINE|L2 9822 NM_145803 7189 Hs.444172 NM_004620 ENSG00000175104 TRAF6 MGC:3310|RNF85 TNF receptor associated factor 6 protein-coding chr7-816 chr7 2687237 2687481 + 14.1 0.000 promoter-TSS (NM_001284355) promoter-TSS (NM_001284355) -843 NM_001284355 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr2-1250 chr2 66983674 66983918 + 14.1 0.000 Intergenic Intergenic -61306 NR_110600 102724321 Hs.146803 NR_110600 ENSG00000232688 LINC01628 - long intergenic non-protein coding RNA 1628 ncRNA chr16-616 chr16 1091083 1091327 + 14.1 0.000 intron (NM_207419, intron 4 of 4) intron (NM_207419, intron 4 of 4) 5039 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr11-722 chr11 45411788 45412032 + 14.1 0.000 Intergenic Intergenic 40513 NR_122071 399886 Hs.559970 NR_122071 ENSG00000255267 LINC02687 - long intergenic non-protein coding RNA 2687 ncRNA chr11-1212 chr11 116984553 116984797 + 14.1 0.000 intron (NM_001366687, intron 1 of 4) intron (NM_001366687, intron 1 of 4) 113753 NM_001366687 23387 Hs.167451 NM_025164 ENSG00000160584 SIK3 L19|QSK|SEMDK|SIK-3 SIK family kinase 3 protein-coding chr6-890 chr6 3632819 3633063 + 14.1 0.000 Intergenic Intergenic 119071 NM_183373 221749 Hs.484500 NM_183373 ENSG00000168994 PXDC1 C6orf145 PX domain containing 1 protein-coding chr9-916 chr9 93954447 93954691 + 14.1 0.000 intron (NM_021570, intron 1 of 3) CpG-28515 786 NM_021570 56033 Hs.164960 NM_021570 ENSG00000131668 BARX1 - BARX homeobox 1 protein-coding chr6-1042 chr6 109303949 109304193 + 14.1 0.000 intron (NR_152435, intron 29 of 45) intron (NR_152435, intron 29 of 45) 77668 NM_001346500 8763 Hs.520313 NM_006016 ENSG00000135535 CD164 DFNA66|MGC-24|MGC-24v|MUC-24|endolyn CD164 molecule protein-coding chr2-1739 chr2 74958699 74958943 + 14.1 0.000 exon (NM_019896, exon 1 of 4) exon (NM_019896, exon 1 of 4) 178 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding chr11-1114 chr11 61718641 61718885 + 14.1 0.000 intron (NM_006133, intron 1 of 19) intron (NM_006133, intron 1 of 19) -33873 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr14-813 chr14 104874460 104874704 + 14.1 0.000 intron (NM_001112726, intron 2 of 18) intron (NM_001112726, intron 2 of 18) 9268 NR_162135 113219454 NR_162135 MIR12121 - microRNA 12121 ncRNA chr8-760 chr8 85516502 85516746 + 14.1 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -51709 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr6-878 chr6 168437826 168438070 + 14.1 0.000 Intergenic Intergenic -3236 NM_001166412 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr12-751 chr12 57094575 57094819 + 14.1 0.000 TTS (NM_003153) TTS (NM_003153) 5583 NM_001330305 4665 Hs.159223 NM_005967 ENSG00000166886 NAB2 MADER NGFI-A binding protein 2 protein-coding chr22-367 chr22 19961968 19962212 + 14.1 0.000 promoter-TSS (NM_007310) promoter-TSS (NM_007310) -463 NM_007310 1312 Hs.370408 NM_000754 ENSG00000093010 COMT HEL-S-98n catechol-O-methyltransferase protein-coding chr19-1622 chr19 44644544 44644788 + 14.1 0.000 intron (NM_001135770, intron 1 of 5) intron (NM_001135770, intron 1 of 5) 756 NM_001135769 5817 Hs.171844 NM_006505 ENSG00000073008 PVR CD155|HVED|NECL5|Necl-5|PVS|TAGE4 PVR cell adhesion molecule protein-coding chr12-1096 chr12 49121098 49121342 + 14.1 0.000 Intergenic Intergenic 10175 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr5-1066 chr5 95284236 95284480 + 14.1 0.000 exon (NM_024717, exon 1 of 23) exon (NM_024717, exon 1 of 23) 217 NM_024717 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding chr11-1241 chr11 133927684 133927928 + 13.9 0.000 intron (NM_001277285, intron 12 of 19) intron (NM_001277285, intron 12 of 19) -26066 NR_024344 283174 Hs.504370 NM_001001873 ENSG00000280237 MIR4697HG LINC00947 MIR4697 host gene ncRNA chr9-792 chr9 101486855 101487099 + 13.9 0.000 promoter-TSS (NM_001303108) promoter-TSS (NM_001303108) 196 NM_001303107 84302 Hs.388742 NM_032342 ENSG00000165152 TMEM246 C9orf125 transmembrane protein 246 protein-coding chr2-1997 chr2 241064490 241064734 + 13.9 0.000 intron (NM_001080437, intron 19 of 31) intron (NM_001080437, intron 19 of 31) 37675 NR_138463 130916 Hs.159556 NM_182501 ENSG00000122085 MTERF4 MTERFD2 mitochondrial transcription termination factor 4 protein-coding chr7-1359 chr7 101092200 101092444 + 13.9 0.000 3' UTR (NM_030961, exon 3 of 3) 3' UTR (NM_030961, exon 3 of 3) 6841 NM_030961 81844 Hs.521092 NM_030961 ENSG00000169871 TRIM56 RNF109 tripartite motif containing 56 protein-coding chr14-628 chr14 57390391 57390635 + 13.9 0.000 promoter-TSS (NM_001011713) promoter-TSS (NM_001011713) -73 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding chr20-343 chr20 50305542 50305786 + 13.9 0.000 intron (NR_034124, intron 2 of 4) intron (NR_034124, intron 2 of 4) 12944 NR_034124 284751 Hs.282325 NM_001025463 ENSG00000203999 LINC01270 - long intergenic non-protein coding RNA 1270 ncRNA chr22-738 chr22 47191208 47191452 + 13.9 0.000 Intergenic Intergenic -154241 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr10-1088 chr10 7592396 7592640 + 13.9 0.000 intron (NM_001001851, intron 7 of 11) intron (NM_001001851, intron 7 of 11) 27155 NM_032817 80760 Hs.498586 NM_030569 ENSG00000123243 ITIH5 ITI-HC5|PP14776 inter-alpha-trypsin inhibitor heavy chain 5 protein-coding chr3-1085 chr3 196969610 196969854 + 13.9 0.000 promoter-TSS (NM_025163) promoter-TSS (NM_025163) -899 NM_025163 80235 Hs.518403 NM_025163 ENSG00000119227 PIGZ GPI-MT-IV|PIG-Z|SMP3 phosphatidylinositol glycan anchor biosynthesis class Z protein-coding chr16-1069 chr16 11414147 11414391 + 13.9 0.000 intron (NM_001370704, intron 44 of 66) intron (NM_001370704, intron 44 of 66) -50991 NR_110907 101927131 Hs.569654 NR_110907 ENSG00000262999 LOC101927131 - uncharacterized LOC101927131 ncRNA chr15-435 chr15 74939074 74939318 + 13.9 0.000 Intergenic Intergenic -1123 NM_004255 9377 Hs.401903 NM_004255 ENSG00000178741 COX5A COX|COX-VA|VA cytochrome c oxidase subunit 5A protein-coding chr14-724 chr14 63933116 63933360 + 13.9 0.000 intron (NM_015180, intron 2 of 114) intron (NM_015180, intron 2 of 114) 80234 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding chr14-757 chr14 80491714 80491958 + 13.9 0.000 Intergenic Intergenic -260779 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding chr12-619 chr12 11688959 11689203 + 13.9 0.000 intron (NM_001987, intron 1 of 7) intron (NM_001987, intron 1 of 7) 39227 NM_001987 2120 Hs.504765 NM_001987 ENSG00000139083 ETV6 TEL|TEL/ABL|THC5 ETS variant 6 protein-coding chr6-812 chr6 55578931 55579175 + 13.9 0.000 exon (NM_019036, exon 1 of 10) exon (NM_019036, exon 1 of 10) 161 NR_109867 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding chr11-1162 chr11 69783103 69783347 + 13.9 0.000 Intergenic Intergenic -7884 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr18-285 chr18 62814783 62815027 + 13.9 0.000 intron (NM_194449, intron 1 of 16) intron (NM_194449, intron 1 of 16) 99364 NM_194449 23239 Hs.465337 NM_194449 ENSG00000081913 PHLPP1 PHLPP|PLEKHE1|PPM3A|SCOP PH domain and leucine rich repeat protein phosphatase 1 protein-coding chr20-290 chr20 7693876 7694120 + 13.9 0.000 Intergenic Intergenic 246460 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding chr8-991 chr8 143214897 143215141 + 13.9 0.000 exon (NM_001301772, exon 3 of 5) exon (NM_001301772, exon 3 of 5) 1801 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr15-678 chr15 68817379 68817623 + 13.9 0.000 intron (NM_006305, intron 1 of 6) CpG 3394 NM_006305 8125 Hs.458747 NM_006305 ENSG00000140350 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic nuclear phosphoprotein 32 family member A protein-coding chr20-434 chr20 44960248 44960492 + 13.9 0.000 promoter-TSS (NM_006809) promoter-TSS (NM_006809) 27 NM_006809 10953 Hs.517066 NM_006809 ENSG00000025772 TOMM34 HTOM34P|TOM34|URCC3 translocase of outer mitochondrial membrane 34 protein-coding chr11-1073 chr11 19210128 19210372 + 13.9 0.000 Intergenic Intergenic -8267 NM_003476 8048 Hs.83577 NM_003476 ENSG00000129170 CSRP3 CLP|CMD1M|CMH12|CRP3|LMO4|MLP cysteine and glycine rich protein 3 protein-coding chr12-832 chr12 50125930 50126174 + 13.9 0.000 Intergenic L2b|LINE|L2 13816 NM_001257134 84987 Hs.388645 NM_032901 ENSG00000178449 COX14 C12orf62|PCAG1 cytochrome c oxidase assembly factor COX14 protein-coding chr17-1377 chr17 64154538 64154782 + 13.9 0.000 intron (NM_018469, intron 9 of 11) intron (NM_018469, intron 9 of 11) 8321 NR_002995 677842 Hs.405444 NR_002995 ENSG00000277887 SNORA50C ACA62|SNORA76|SNORA76C small nucleolar RNA, H/ACA box 50C snoRNA chr14-698 chr14 50180399 50180643 + 13.9 0.000 intron (NM_006939, intron 7 of 22) intron (NM_006939, intron 7 of 22) 51057 NM_006939 6655 Hs.291533 NM_006939 ENSG00000100485 SOS2 NS9|SOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding chr5-755 chr5 73693806 73694050 + 13.9 0.000 intron (NM_001177693, intron 2 of 35) intron (NM_001177693, intron 2 of 35) 67770 NM_001177693 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding chr17-1107 chr17 6470206 6470450 + 13.9 0.000 exon (NM_001165966, exon 12 of 19) exon (NM_001165966, exon 12 of 19) 25873 NM_001195228 54478 Hs.592116 NM_019013 ENSG00000129195 PIMREG CATS|FAM64A|RCS1 PICALM interacting mitotic regulator protein-coding chr18-202 chr18 44537683 44537927 + 13.9 0.000 intron (NR_131768, intron 1 of 4) intron (NR_131768, intron 1 of 4) 6026 NR_131768 105667213 Hs.135737 NR_131768 LINC01601 - long intergenic non-protein coding RNA 1601 ncRNA chr1-927 chr1 39230603 39230847 + 13.9 0.000 intron (NM_012090, intron 1 of 92) intron (NM_012090, intron 1 of 92) 146558 NM_012090 23499 Hs.472475 NM_012090 ENSG00000127603 MACF1 ABP620|ACF7|LIS9|MACF|OFC4 microtubule actin crosslinking factor 1 protein-coding chr4-918 chr4 8215828 8216072 + 13.9 0.000 intron (NM_018986, intron 5 of 17) intron (NM_018986, intron 5 of 17) 16660 NM_018986 54436 Hs.479116 NM_018986 ENSG00000125089 SH3TC1 - SH3 domain and tetratricopeptide repeats 1 protein-coding chr5-908 chr5 110409381 110409625 + 13.9 0.000 Intergenic Kanga1c|DNA|TcMar-Tc2 104412 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA chr2-1261 chr2 73091191 73091435 + 13.9 0.000 intron (NM_001371272, intron 1 of 5) HAL1|LINE|L1 -19477 NM_001330401 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr16-820 chr16 55432344 55432588 + 13.9 0.000 intron (NR_147198, intron 4 of 6) intron (NR_147198, intron 4 of 6) 29831 NR_147198 107984884 Hs.666473 NR_147198 MMP2-AS1 - MMP2 antisense RNA 1 ncRNA chr2-1489 chr2 88823822 88824066 + 13.9 0.000 Intergenic MIR1_Amn|SINE|MIR 11574 NR_039635 100616399 NR_039635 ENSG00000265510 MIR4436A mir-4436a microRNA 4436a ncRNA chr7-1427 chr7 139231788 139232032 + 13.9 0.000 exon (NM_173569, exon 1 of 18) exon (NM_173569, exon 1 of 18) 673 NM_173569 254048 Hs.153458 NM_173569 ENSG00000157741 UBN2 - ubinuclein 2 protein-coding chr10-1271 chr10 103696361 103696605 + 13.9 0.000 intron (NM_014631, intron 5 of 13) intron (NM_014631, intron 5 of 13) -18268 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding chr1-2421 chr1 83508481 83508725 + 13.9 0.000 Intergenic Intergenic 62549 NR_146478 101927542 Hs.623976 NR_146478 LINC01712 - long intergenic non-protein coding RNA 1712 ncRNA chr13-543 chr13 114163833 114164077 + 13.9 0.000 Intergenic Intergenic -31332 NM_007368 22821 Hs.593075 NM_007368 ENSG00000185989 RASA3 GAP1IP4BP|GAPIII RAS p21 protein activator 3 protein-coding chr3-910 chr3 196639570 196639814 + 13.9 0.000 promoter-TSS (NM_198565) promoter-TSS (NM_198565) -2 NM_198565 375387 Hs.702186 NM_198565 ENSG00000174004 NRROS ELLP3030|GARPL1|LRRC33|UNQ3030 negative regulator of reactive oxygen species protein-coding chr20-581 chr20 33672733 33672977 + 13.9 0.000 intron (NM_031232, intron 1 of 11) intron (NM_031232, intron 1 of 11) 1573 NM_031231 63941 Hs.516986 NM_031231 ENSG00000125967 NECAB3 APBA2BP|EFCBP3|NIP1|STIP3|SYTIP2|XB51|dJ63M2.4|dJ63M2.5 N-terminal EF-hand calcium binding protein 3 protein-coding chr22-474 chr22 24886292 24886536 + 13.9 0.000 intron (NM_001098498, intron 15 of 23) intron (NM_001098498, intron 15 of 23) 60281 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr21-121 chr21 45074171 45074415 + 13.9 0.000 promoter-TSS (NR_027673) promoter-TSS (NR_027673) -285 NR_027673 104 Hs.474018 NM_001112 ENSG00000197381 ADARB1 ADAR2|DRABA2|DRADA2|RED1 adenosine deaminase RNA specific B1 protein-coding chr22-371 chr22 20996028 20996272 + 13.9 0.000 intron (NM_006767, intron 18 of 20) intron (NM_006767, intron 18 of 20) -5772 NR_027052 439931 Hs.517430 NR_027051 ENSG00000230513 THAP7-AS1 - THAP7 antisense RNA 1 ncRNA chr7-1351 chr7 100477503 100477747 + 13.9 0.000 exon (NM_001303043, exon 2 of 5) exon (NM_001303043, exon 2 of 5) 1589 NM_030935 81628 Hs.469798 NM_030935 ENSG00000166925 TSC22D4 THG-1|THG1|TILZ2 TSC22 domain family member 4 protein-coding chr7-1420 chr7 132252061 132252305 + 13.9 0.000 intron (NM_020911, intron 4 of 31) intron (NM_020911, intron 4 of 31) -8678 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr7-759 chr7 98878735 98878979 + 13.9 0.000 intron (NM_003496, intron 1 of 70) CpG 367 NM_003496 8295 Hs.203952 NM_003496 ENSG00000196367 TRRAP DEDDFA|PAF350/400|PAF400|STAF40|TR-AP|Tra1 transformation/transcription domain associated protein protein-coding chr10-413 chr10 73839449 73839693 + 13.9 0.000 exon (NM_001367524, exon 12 of 19) exon (NM_001367524, exon 12 of 19) -27751 NR_160744 8509 Hs.654758 NM_003635 ENSG00000166507 NDST2 HSST2|N-HSST 2|NST2 N-deacetylase and N-sulfotransferase 2 protein-coding chr12-1025 chr12 646566 646810 + 13.9 0.000 TTS (NR_122124) TTS (NR_122124) -3052 NM_001294346 4815 Hs.655804 NM_016533 ENSG00000171840 NINJ2 - ninjurin 2 protein-coding chr7-1406 chr7 128893698 128893942 + 13.9 0.000 exon (NM_199349, exon 11 of 21) exon (NM_199349, exon 11 of 21) 16889 NM_001366122 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr8-914 chr8 94554245 94554489 + 13.9 0.000 promoter-TSS (NM_183009) promoter-TSS (NM_183009) -849 NM_183009 25962 Hs.202238 NM_015496 ENSG00000164944 VIRMA KIAA1429|MSTP054|fSAP121 vir like m6A methyltransferase associated protein-coding chr22-645 chr22 30498009 30498253 + 13.9 0.000 intron (NM_001161368, intron 2 of 11) AluSz6|SINE|Alu 7564 NM_174977 284904 Hs.517541 NM_174977 ENSG00000133488 SEC14L4 TAP3 SEC14 like lipid binding 4 protein-coding chr10-736 chr10 72171153 72171397 + 13.9 0.000 intron (NM_001369110, intron 5 of 8) MLT1D|LTR|ERVL-MaLR 44681 NM_001369091 51008 Hs.500007 NM_015947 ENSG00000138303 ASCC1 ASC1p50|CGI-18|SMABF2|p50 activating signal cointegrator 1 complex subunit 1 protein-coding chr12-1157 chr12 68267751 68267995 + 13.9 0.000 Intergenic AluSc|SINE|Alu -14269 NM_020525 50616 Hs.287369 NM_020525 ENSG00000127318 IL22 IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18 interleukin 22 protein-coding chr11-619 chr11 67247200 67247444 + 13.9 0.000 intron (NR_027473, intron 15 of 20) AluSz|SINE|Alu 7308 NM_001256405 22992 Hs.124147 NM_012308 ENSG00000173120 KDM2A CXXC8|FBL11|FBL7|FBXL11|JHDM1A|LILINA lysine demethylase 2A protein-coding chr3-1259 chr3 45225057 45225301 + 13.9 0.000 exon (NM_015444, exon 1 of 1) exon (NM_015444, exon 1 of 1) 1108 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding chr12-933 chr12 9825248 9825492 + 13.9 0.000 intron (NR_159359, intron 1 of 5) L1PA13|LINE|L1 -2111 NM_001291823 51348 Hs.183125 NM_016523 ENSG00000150045 KLRF1 CLEC5C|NKp80 killer cell lectin like receptor F1 protein-coding chr22-437 chr22 30790523 30790767 + 13.9 0.000 intron (NM_001282740, intron 1 of 12) intron (NM_001282740, intron 1 of 12) 26392 NM_001282740 23762 Hs.517546 NM_030758 ENSG00000184792 OSBP2 HLM|ORP-4|ORP4|OSBPL1|OSBPL4 oxysterol binding protein 2 protein-coding chr9-1108 chr9 121556646 121556890 + 13.9 0.000 Intergenic Intergenic -10334 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr6-914 chr6 13804997 13805241 + 13.9 0.000 intron (NM_001031713, intron 2 of 8) intron (NM_001031713, intron 2 of 8) 9441 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr4-287 chr4 10605707 10605951 + 13.9 0.000 intron (NM_052964, intron 2 of 18) AluSc|SINE|Alu 78939 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding chr7-1200 chr7 2669426 2669670 + 13.9 0.000 Intergenic AluJo|SINE|Alu -9974 NM_133463 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chrX-439 chrX 39757430 39757674 + 13.9 0.000 Intergenic MER5A1|DNA|hAT-Charlie -80009 NR_039763 100616251 NR_039763 ENSG00000263972 MIR1587 - microRNA 1587 ncRNA chr8-801 chr8 686832 687076 + 13.9 0.000 intron (NR_156467, intron 3 of 5) intron (NR_156467, intron 3 of 5) 44270 NR_156467 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr9-1396 chr9 135778375 135778619 + 13.9 0.000 intron (NM_001272003, intron 21 of 30) intron (NM_001272003, intron 21 of 30) 76312 NM_001272003 57582 Hs.104950 NM_020822 ENSG00000107147 KCNT1 EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2 potassium sodium-activated channel subfamily T member 1 protein-coding chr22-700 chr22 40425783 40426027 + 13.9 0.000 intron (NM_020831, intron 7 of 14) intron (NM_020831, intron 7 of 14) 37535 NM_001282660 57591 Hs.654688 NM_020831 ENSG00000196588 MRTFA BSAC|MAL|MKL|MKL1|MRTF-A myocardin related transcription factor A protein-coding chr12-836 chr12 52044315 52044559 + 13.9 0.000 intron (NM_001202234, intron 2 of 7) intron (NM_001202234, intron 2 of 7) 6722 NM_001202234 3164 Hs.524430 NM_002135 ENSG00000123358 NR4A1 GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3 nuclear receptor subfamily 4 group A member 1 protein-coding chr1-1003 chr1 20717980 20718224 + 13.9 0.000 promoter-TSS (NM_001287212) promoter-TSS (NM_001287212) -95 NM_001122819 57576 Hs.130411 NM_020816 ENSG00000117245 KIF17 KIF17B|KIF3X|KLP-2|OSM-3 kinesin family member 17 protein-coding chr1-1756 chr1 49245286 49245530 + 13.9 0.000 intron (NM_001323575, intron 4 of 12) intron (NM_001323575, intron 4 of 12) -12003 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA chr6-787 chr6 33954359 33954603 + 13.9 0.000 Intergenic L2|LINE|L2 45570 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr17-1344 chr17 56780376 56780620 + 13.9 0.000 Intergenic CpG 53422 NM_001085430 339210 Hs.658949 NM_001085430 ENSG00000214226 C17orf67 - chromosome 17 open reading frame 67 protein-coding chr1-2123 chr1 222331707 222331951 + 13.9 0.000 Intergenic Intergenic 216275 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding chr9-1373 chr9 133726360 133726604 + 13.9 0.000 intron (NM_001134707, intron 6 of 20) intron (NM_001134707, intron 6 of 20) 11870 NM_001134707 1757 Hs.198003 NM_007101 ENSG00000123453 SARDH BPR-2|DMGDHL1|SAR|SARD|SDH sarcosine dehydrogenase protein-coding chr7-563 chr7 44088857 44089101 + 13.9 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -6439 NR_156113 27434 Hs.596982 NM_013284 ENSG00000122678 POLM Pol Mu|Tdt-N DNA polymerase mu protein-coding chr7-1355 chr7 100682413 100682657 + 13.9 0.000 intron (NM_022574, intron 20 of 23) intron (NM_022574, intron 20 of 23) 6913 NM_022574 64599 Hs.414396 NM_022574 ENSG00000146830 GIGYF1 GYF1|PERQ1 GRB10 interacting GYF protein 1 protein-coding chr1-1648 chr1 9196451 9196695 + 13.9 0.000 Intergenic Intergenic -14235 NR_132742 106614088 Hs.551837 NR_132742 ENSG00000228526 MIR34AHG - MIR34A host gene ncRNA chr18-358 chr18 74117113 74117357 + 13.9 0.000 intron (NM_001142958, intron 8 of 9) intron (NM_001142958, intron 8 of 9) 30599 NM_001142958 201456 Hs.664011 NM_152676 ENSG00000141665 FBXO15 FBX15 F-box protein 15 protein-coding chr9-1309 chr9 121662992 121663236 + 13.9 0.000 intron (NM_032552, intron 1 of 16) intron (NM_032552, intron 1 of 16) -79671 NM_138709 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr22-616 chr22 20263964 20264208 + 13.9 0.000 intron (NM_023004, intron 1 of 1) intron (NM_023004, intron 1 of 1) 4232 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr6-970 chr6 41505106 41505350 + 13.9 0.000 intron (NR_120347, intron 2 of 2) CpG 2784 NR_120347 103106903 Hs.563396 NR_120347 ENSG00000226917 LINC01276 - long intergenic non-protein coding RNA 1276 ncRNA chr2-1826 chr2 133886779 133887023 + 13.9 0.000 Intergenic Intergenic -233034 NM_001371457 chr12-741 chr12 47818746 47818990 + 13.9 0.000 intron (NM_015401, intron 1 of 25) intron (NM_015401, intron 1 of 25) 1035 NM_001308090 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding chr20-230 chr20 31470825 31471069 + 13.9 0.000 intron (NM_001037500, intron 1 of 1) SVA_D|Retroposon|SVA 2066 NM_001037500 245937 Hs.381373 NM_001037500 ENSG00000180383 DEFB124 DEFB-24 defensin beta 124 protein-coding chr21-239 chr21 39388575 39388819 + 13.9 0.000 intron (NM_001146218, intron 1 of 4) intron (NM_001146218, intron 1 of 4) 934 NR_146616 7485 Hs.198308 NM_004627 ENSG00000182093 GET1 CHD5|WRB guided entry of tail-anchored proteins factor 1 protein-coding chr15-654 chr15 59369784 59370028 + 13.9 0.000 intron (NM_004998, intron 1 of 27) (AC)n|Simple_repeat|Simple_repeat 2965 NM_004998 4643 Hs.654506 NM_004998 ENSG00000157483 MYO1E FSGS6|HuncM-IC|MYO1C myosin IE protein-coding chr14-827 chr14 105249262 105249506 + 13.9 0.000 promoter-TSS (NM_001242789) promoter-TSS (NM_001242789) 20 NM_001242789 2972 Hs.424484 NM_001519 ENSG00000185024 BRF1 BRF|BRF-1|CFDS|GTF3B|HEL-S-76p|TAF3B2|TAF3C|TAFIII90|TF3B90|TFIIIB90|hBRF BRF1 RNA polymerase III transcription initiation factor subunit protein-coding chr3-1427 chr3 140740523 140740767 + 13.9 0.000 Intergenic Intergenic 62581 NM_152616 287015 Hs.343487 NM_152616 ENSG00000155890 TRIM42 PPP1R40|T4A1 tripartite motif containing 42 protein-coding chr3-1496 chr3 189996092 189996336 + 13.9 0.000 intron (NM_001134418, intron 1 of 14) L1MA6|LINE|L1 124683 NM_018192 55214 Hs.374191 NM_018192 ENSG00000090530 P3H2 LEPREL1|MCVD|MLAT4 prolyl 3-hydroxylase 2 protein-coding chr19-1620 chr19 43633600 43633844 + 13.9 0.000 intron (NM_145296, intron 1 of 8) AluJo|SINE|Alu 6128 NM_145296 199731 Hs.370984 NM_145296 ENSG00000105767 CADM4 IGSF4C|NECL4|Necl-4|TSLL2|synCAM4 cell adhesion molecule 4 protein-coding chr19-920 chr19 3770506 3770750 + 13.9 0.000 exon (NM_032753, exon 3 of 3) exon (NM_032753, exon 3 of 3) 1600 NM_001319074 84839 Hs.532691 NM_032753 ENSG00000173976 RAX2 ARMD6|CORD11|QRX|RAXL1 retina and anterior neural fold homeobox 2 protein-coding chr4-1054 chr4 119454638 119454882 + 13.9 0.000 promoter-TSS (NR_135112) promoter-TSS (NR_135112) -23 NR_037630 645513 Hs.677546 NR_037630 ENSG00000245958 LOC645513 - septin 7 pseudogene pseudo chr8-971 chr8 133320446 133320690 + 13.9 0.000 Intergenic Intergenic -23264 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding chr5-670 chr5 95823770 95824014 + 13.9 0.000 Intergenic Intergenic -1019 NM_001243659 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding chr16-990 chr16 88925341 88925585 + 13.9 0.000 intron (NM_005187, intron 1 of 11) intron (NM_005187, intron 1 of 11) -14574 NM_001290330 100129697 Hs.689377 NM_001290330 LOC100129697 - uncharacterized LOC100129697 protein-coding chr5-1127 chr5 139185707 139185951 + 13.9 0.000 intron (NM_022464, intron 1 of 9) intron (NM_022464, intron 1 of 9) 12539 NM_022464 64374 Hs.483521 NM_022464 ENSG00000120725 SIL1 BAP|MSS|ULG5 SIL1 nucleotide exchange factor protein-coding chr2-1852 chr2 156329745 156329989 + 13.9 0.000 exon (NM_006186, exon 3 of 8) exon (NM_006186, exon 3 of 8) 2854 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding chr7-1279 chr7 44962780 44963024 + 13.9 0.000 intron (NM_033054, intron 21 of 21) CpG 16113 NM_033054 64005 Hs.37617 NM_033054 ENSG00000136286 MYO1G HA2|HLA-HA2|MHAG myosin IG protein-coding chr12-582 chr12 62466548 62466792 + 13.9 0.000 promoter-TSS (NM_001278471) promoter-TSS (NM_001278471) -156 NM_001278470 23041 Hs.389378 NM_015026 ENSG00000061987 MON2 - MON2 homolog, regulator of endosome-to-Golgi trafficking protein-coding chr1-1754 chr1 47875593 47875837 + 13.9 0.000 intron (NM_001194986, intron 2 of 6) (GAAA)n|Simple_repeat|Simple_repeat 121670 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding chr7-996 chr7 100602865 100603109 + 13.9 0.000 non-coding (NR_038910, exon 2 of 9) non-coding (NR_038910, exon 2 of 9) 624 NM_002593 5118 Hs.202097 NM_002593 ENSG00000106333 PCOLCE PCPE|PCPE-1|PCPE1 procollagen C-endopeptidase enhancer protein-coding chr3-793 chr3 170689689 170689933 + 13.8 0.000 intron (NR_135556, intron 2 of 5) intron (NR_135556, intron 2 of 5) -103736 NM_020949 57709 Hs.596660 NM_020949 ENSG00000013293 SLC7A14 PPP1R142 solute carrier family 7 member 14 protein-coding chr12-1275 chr12 124927166 124927410 + 13.8 0.000 Intergenic Intergenic 11741 NR_049820 100847004 NR_049820 ENSG00000265345 MIR5188 mir-5188 microRNA 5188 ncRNA chr3-871 chr3 129312841 129313085 + 13.8 0.000 Intergenic Intergenic -3308 NR_026991 339942 Hs.450096 NM_001025468 H1FX-AS1 C3orf47 H1FX antisense RNA 1 ncRNA chr2-963 chr2 96265324 96265568 + 13.8 0.000 promoter-TSS (NM_004804) promoter-TSS (NM_004804) 551 NM_001193304 55654 Hs.164303 NM_017849 ENSG00000135956 TMEM127 - transmembrane protein 127 protein-coding chrX-572 chrX 154361382 154361626 + 13.8 0.000 exon (NM_001456, exon 21 of 47) exon (NM_001456, exon 21 of 47) 13130 NM_001110556 2316 Hs.195464 NM_001456 ENSG00000196924 FLNA ABP-280|ABPX|CSBS|CVD1|FGS2|FLN|FLN-A|FLN1|FMD|MNS|NHBP|OPD|OPD1|OPD2|XLVD|XMVD filamin A protein-coding chr15-552 chr15 45163118 45163362 + 13.8 0.000 intron (NM_175940, intron 31 of 33) intron (NM_175940, intron 31 of 33) 17967 NM_001301171 90525 Hs.310399 NM_138356 ENSG00000138606 SHF - Src homology 2 domain containing F protein-coding chr19-947 chr19 13298791 13299035 + 13.8 0.000 exon (NM_001127221, exon 19 of 47) exon (NM_001127221, exon 19 of 47) 148502 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr6-699 chr6 87322310 87322554 + 13.8 0.000 promoter-TSS (NM_001287445) promoter-TSS (NM_001287445) -156 NM_001042493 57150 Hs.70769 NM_020425 ENSG00000111850 SMIM8 C6orf162|dJ102H19.2 small integral membrane protein 8 protein-coding chr17-353 chr17 73118776 73119020 + 13.8 0.000 Intergenic AluJb|SINE|Alu -26210 NM_001159770 201266 Hs.221127 NM_139177 ENSG00000133195 SLC39A11 C17orf26|ZIP-11|ZIP11 solute carrier family 39 member 11 protein-coding chr4-773 chr4 182917469 182917713 + 13.8 0.000 promoter-TSS (NM_001351745) promoter-TSS (NM_001351745) -114 NM_001351750 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr3-750 chr3 100477662 100477906 + 13.8 0.000 Intergenic SVA_D|Retroposon|SVA -14835 NM_001363876 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding chr5-641 chr5 176615200 176615444 + 13.8 0.000 Intergenic Intergenic -5166 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr20-644 chr20 59083030 59083274 + 13.8 0.000 Intergenic L2a|LINE|L2 -40306 NR_037929 100533975 Hs.656865 NR_037929 SLMO2-ATP5E - SLMO2-ATP5E readthrough ncRNA chr1-2303 chr1 26331087 26331331 + 13.8 0.000 intron (NM_001039775, intron 15 of 19) intron (NM_001039775, intron 15 of 19) -12944 NM_145345 91544 Hs.145061 NM_145345 ENSG00000158062 UBXN11 COA-1|PP2243|SOC|SOCI|UBXD5 UBX domain protein 11 protein-coding chrX-163 chrX 65644976 65645220 + 13.8 0.000 Intergenic Intergenic -22556 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr19-793 chr19 8048975 8049219 + 13.8 0.000 Intergenic Intergenic -3665 NM_001201359 6370 Hs.310511 NM_005624 ENSG00000131142 CCL25 Ckb15|SCYA25|TECK C-C motif chemokine ligand 25 protein-coding chr8-899 chr8 80284160 80284404 + 13.8 0.000 Intergenic Intergenic 42893 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA chr19-1228 chr19 32719695 32719939 + 13.8 0.000 promoter-TSS (NM_001110822) promoter-TSS (NM_001110822) 50 NM_001110822 91646 Hs.646351 NM_001015890 ENSG00000173809 TDRD12 ECAT8 tudor domain containing 12 protein-coding chr4-850 chr4 147732814 147733058 + 13.8 0.000 intron (NM_024605, intron 1 of 22) intron (NM_024605, intron 1 of 22) 848 NM_024605 79658 Hs.368631 NM_024605 ENSG00000071205 ARHGAP10 GRAF2|PS-GAP|PSGAP Rho GTPase activating protein 10 protein-coding chr15-506 chr15 71340137 71340381 + 13.8 0.000 intron (NM_024817, intron 5 of 16) MIRb|SINE|MIR -151200 NR_120350 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA chr15-712 chr15 79811835 79812079 + 13.8 0.000 Intergenic LTR16C|LTR|ERVL 85040 NR_037654 10588 Hs.194294 NM_006441 ENSG00000136371 MTHFS HsT19268|NEDMEHM methenyltetrahydrofolate synthetase protein-coding chr17-769 chr17 40448737 40448981 + 13.8 0.000 intron (NM_001552, intron 1 of 3) intron (NM_001552, intron 1 of 3) 5409 NM_001552 3487 Hs.462998 NM_001552 ENSG00000141753 IGFBP4 BP-4|HT29-IGFBP|IBP4|IGFBP-4 insulin like growth factor binding protein 4 protein-coding chr7-1255 chr7 32070001 32070245 + 13.8 0.000 intron (NM_001191059, intron 2 of 18) intron (NM_001191059, intron 2 of 18) 284 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-2008 chr1 26023043 26023287 + 13.8 0.000 exon (NM_004455, exon 1 of 11) exon (NM_004455, exon 1 of 11) 1390 NM_004455 2134 Hs.150956 NM_004455 ENSG00000158008 EXTL1 EXTL exostosin like glycosyltransferase 1 protein-coding chr19-1657 chr19 50369107 50369351 + 13.8 0.000 Intergenic MIRb|SINE|MIR -3590 NM_004851 9476 Hs.512843 NM_004851 ENSG00000131400 NAPSA KAP|Kdap|NAP1|NAPA|SNAPA napsin A aspartic peptidase protein-coding chr1-1315 chr1 33181955 33182199 + 13.8 0.000 promoter-TSS (NM_018207) promoter-TSS (NM_018207) -34 NM_018207 55223 Hs.656006 NM_018207 ENSG00000116525 TRIM62 DEAR1 tripartite motif containing 62 protein-coding chr17-1442 chr17 80964860 80965104 + 13.8 0.000 3' UTR (NM_001163034, exon 30 of 30) 3' UTR (NM_001163034, exon 30 of 30) 6231 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr9-412 chr9 136516930 136517174 + 13.8 0.000 intron (NM_017617, intron 9 of 33) intron (NM_017617, intron 9 of 33) 2574 NR_039820 100616242 NR_039820 ENSG00000263403 MIR4673 - microRNA 4673 ncRNA chr10-1122 chr10 30152137 30152381 + 13.8 0.000 Intergenic L1PB1|LINE|L1 -36765 NM_001350022 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr5-1122 chr5 136133666 136133910 + 13.8 0.000 non-coding (NR_026763, exon 1 of 2) non-coding (NR_026763, exon 1 of 2) 943 NM_005903 4090 Hs.167700 NM_005903 ENSG00000113658 SMAD5 DWFC|JV5-1|MADH5 SMAD family member 5 protein-coding chr16-995 chr16 89636482 89636726 + 13.8 0.000 exon (NM_001128141, exon 5 of 11) exon (NM_001128141, exon 5 of 11) 16007 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chrX-553 chrX 134667832 134668076 + 13.8 0.000 intron (NM_001316887, intron 2 of 3) L1MB7|LINE|L1 -9471 NM_001316889 10761 Hs.496811 NM_021796 ENSG00000170965 PLAC1 CT92|OOSP2B|OOSP2L placenta enriched 1 protein-coding chr15-271 chr15 28915283 28915527 + 13.8 0.000 intron (NM_001353792, intron 1 of 13).2 (AC)n|Simple_repeat|Simple_repeat -6232 NM_005503 321 Hs.618112 NM_005503 ENSG00000034053 APBA2 D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L amyloid beta precursor protein binding family A member 2 protein-coding chr11-585 chr11 117231987 117232231 + 13.8 0.000 promoter-TSS (NM_001278249) promoter-TSS (NM_001278249) -36 NM_004716 9159 Hs.648612 NM_004716 ENSG00000160613 PCSK7 LPC|PC7|PC8|SPC7 proprotein convertase subtilisin/kexin type 7 protein-coding chr11-901 chr11 63999388 63999632 + 13.8 0.000 intron (NM_014067, intron 7 of 10) CpG 13657 NM_017670 55611 Hs.473788 NM_017670 ENSG00000167770 OTUB1 HSPC263|OTB1|OTU1 OTU deubiquitinase, ubiquitin aldehyde binding 1 protein-coding chr5-655 chr5 20169342 20169586 + 13.8 0.000 intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -136087 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA chr11-1244 chr11 382884 383128 + 13.8 0.000 TTS (NM_178537) TTS (NM_178537) -9590 NM_001303029 11187 Hs.534395 NM_007183 ENSG00000184363 PKP3 - plakophilin 3 protein-coding chr13-510 chr13 98752422 98752666 + 13.8 0.000 intron (NM_005073, intron 1 of 22) CpG 128 NM_005073 6564 Hs.436893 NM_005073 ENSG00000088386 SLC15A1 HPECT1|HPEPT1|PEPT1 solute carrier family 15 member 1 protein-coding chr10-755 chr10 111063534 111063778 + 13.8 0.000 Intergenic L1MA5A|LINE|L1 -13373 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding chr19-1611 chr19 42168498 42168742 + 13.8 0.000 Intergenic Intergenic -35107 NR_036208 100422980 NR_036208 ENSG00000266226 MIR4323 - microRNA 4323 ncRNA chr9-807 chr9 128127567 128127811 + 13.8 0.000 promoter-TSS (NM_025072) promoter-TSS (NM_025072) 40 NM_025072 80142 Hs.495219 NM_025072 ENSG00000148334 PTGES2 C9orf15|GBF-1|GBF1|PGES2|mPGES-2 prostaglandin E synthase 2 protein-coding chr11-1424 chr11 12390273 12390517 + 13.8 0.000 intron (NM_018222, intron 1 of 12) intron (NM_018222, intron 1 of 12) 12824 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding chrX-264 chrX 107676813 107677057 + 13.8 0.000 Intergenic Intergenic 39573 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr16-899 chr16 89379571 89379815 + 13.8 0.000 intron (NR_045839, intron 2 of 9) intron (NR_045839, intron 2 of 9) -51225 NR_110931 101927817 Hs.667942 NR_110931 LOC101927817 - uncharacterized LOC101927817 ncRNA chr8-628 chr8 47738800 47739044 + 13.8 0.000 promoter-TSS (NM_005195) promoter-TSS (NM_005195) -758 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr19-1513 chr19 11143253 11143497 + 13.8 0.000 Intergenic Intergenic 12407 NM_001317033 147841 Hs.381225 NM_182513 ENSG00000161888 SPC24 SPBC24 SPC24 component of NDC80 kinetochore complex protein-coding chr9-849 chr9 6499078 6499322 + 13.8 0.000 intron (NM_152896, intron 12 of 15) intron (NM_152896, intron 12 of 15) 86001 NM_152896 115426 Hs.493401 NM_152896 ENSG00000147854 UHRF2 NIRF|RNF107|TDRD23|URF2 ubiquitin like with PHD and ring finger domains 2 protein-coding chr7-631 chr7 52594778 52595022 + 13.8 0.000 Intergenic AluY|SINE|Alu -440733 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr1-2068 chr1 152328562 152328806 + 13.8 0.000 intron (NR_103778, intron 2 of 6) intron (NR_103778, intron 2 of 6) -3481 NM_002016 2312 Hs.654510 NM_002016 ENSG00000143631 FLG ATOD2 filaggrin protein-coding chr1-2451 chr1 94854540 94854784 + 13.8 0.000 intron (NM_001258340, intron 9 of 14) intron (NM_001258340, intron 9 of 14) 30169 NM_001350223 126969 Hs.483423 NM_152369 ENSG00000143036 SLC44A3 CTL3 solute carrier family 44 member 3 protein-coding chr17-878 chr17 63697908 63698152 + 13.8 0.000 3' UTR (NM_030576, exon 5 of 5) 3' UTR (NM_030576, exon 5 of 5) 2095 NM_030576 80774 Hs.591166 NM_030576 ENSG00000136490 LIMD2 - LIM domain containing 2 protein-coding chr6-1124 chr6 165438788 165439032 + 13.8 0.000 intron (NM_006661, intron 6 of 22) AluJr4|SINE|Alu -129305 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding chr5-1153 chr5 151234812 151235056 + 13.8 0.000 Intergenic Intergenic -10842 NM_015621 26112 Hs.655336 NM_015621 ENSG00000198624 CCDC69 - coiled-coil domain containing 69 protein-coding chr17-815 chr17 80117611 80117855 + 13.8 0.000 exon (NM_001079803, exon 18 of 21) exon (NM_001079803, exon 18 of 21) 16152 NM_001079804 2548 Hs.1437 NM_000152 ENSG00000171298 GAA LYAG glucosidase alpha, acid protein-coding chr21-232 chr21 35136826 35137070 + 13.8 0.000 Intergenic Intergenic -87650 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr4-790 chr4 3434723 3434967 + 13.8 0.000 intron (NM_198227, intron 15 of 15) intron (NM_198227, intron 15 of 15) -7123 NM_001528 3083 Hs.104 NM_001528 ENSG00000109758 HGFAC HGFA HGF activator protein-coding chr1-903 chr1 244445533 244445777 + 13.8 0.000 intron (NM_001365073, intron 1 of 12) intron (NM_001365073, intron 1 of 12) 6254 NM_001126 159 Hs.498313 NM_001126 ENSG00000035687 ADSS ADEH|ADSS 2|ADSS2 adenylosuccinate synthase protein-coding chr4-616 chr4 124712458 124712702 + 13.8 0.000 5' UTR (NM_020337, exon 1 of 5) 5' UTR (NM_020337, exon 1 of 5) 152 NM_001167882 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding chr21-255 chr21 43759642 43759886 + 13.8 0.000 3' UTR (NM_001331030, exon 10 of 10) 3' UTR (NM_001331030, exon 10 of 10) 16611 NM_000100 1476 Hs.695 NM_000100 ENSG00000160213 CSTB CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD cystatin B protein-coding chr2-899 chr2 23386832 23387076 + 13.8 0.000 intron (NM_052920, intron 1 of 13) CpG 1775 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding chr17-1278 chr17 29591875 29592119 + 13.8 0.000 Intergenic Intergenic -1135 NM_152345 124930 Hs.662164 NM_152345 ENSG00000198720 ANKRD13B - ankyrin repeat domain 13B protein-coding chr17-736 chr17 2707532 2707776 + 13.8 0.000 intron (NM_001366662, intron 1 of 25) intron (NM_001366662, intron 1 of 25) 4110 NM_015229 23277 Hs.22616 NM_015229 ENSG00000132361 CLUH CLU1 clustered mitochondria homolog protein-coding chr6-766 chr6 167790194 167790438 + 13.8 0.000 intron (NR_026773, intron 2 of 3) (CCACCC)n|Simple_repeat|Simple_repeat -5213 NR_149041 441179 Hs.192711 NR_149041 ENSG00000269155 LOC441179 - uncharacterized LOC441179 ncRNA chr8-952 chr8 125091665 125091909 + 13.8 0.000 promoter-TSS (NM_001349485) promoter-TSS (NM_001349485) 5 NM_014846 9897 Hs.270043 NM_014846 ENSG00000164961 WASHC5 KIAA0196|RTSC|RTSC1|SPG8 WASH complex subunit 5 protein-coding chr12-478 chr12 94649750 94649994 + 13.8 0.000 intron (NM_020698, intron 1 of 3) CpG 685 NM_020698 57458 Hs.370410 NM_020698 ENSG00000057704 TMCC3 - transmembrane and coiled-coil domain family 3 protein-coding chr11-1671 chr11 127761985 127762229 + 13.8 0.000 Intergenic L1M4b|LINE|L1 -446659 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr20-386 chr20 59006533 59006777 + 13.8 0.000 intron (NM_001336, intron 1 of 5) intron (NM_001336, intron 1 of 5) 599 NM_001336 1522 Hs.252549 NM_001336 ENSG00000101160 CTSZ CTSX cathepsin Z protein-coding chr20-652 chr20 62404730 62404974 + 13.8 0.000 intron (NM_031215, intron 1 of 9) intron (NM_031215, intron 1 of 9) 2431 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding chr7-517 chr7 68799798 68800042 + 13.8 0.000 Intergenic AluSx1|SINE|Alu 779667 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA chr22-735 chr22 46430383 46430627 + 13.8 0.000 intron (NM_014246, intron 5 of 34) intron (NM_014246, intron 5 of 34) 94791 NM_001282783 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr2-1224 chr2 38438161 38438405 + 13.8 0.000 Intergenic Intergenic 6989 NR_146454 100996902 Hs.128280 NR_146454 ENSG00000235009 LINC01883 - long intergenic non-protein coding RNA 1883 ncRNA chr8-633 chr8 52941650 52941894 + 13.8 0.000 TTS (NM_005285) TTS (NM_005285) 1864 NM_005285 2831 Hs.248117 NM_005285 ENSG00000183729 NPBWR1 GPR7 neuropeptides B and W receptor 1 protein-coding chr9-397 chr9 125780403 125780647 + 13.8 0.000 intron (NR_024122, intron 2 of 7) SVA_D|Retroposon|SVA 32342 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding chr7-425 chr7 99375170 99375414 + 13.8 0.000 intron (NM_005720, intron 1 of 9) CpG 562 NM_005720 10095 Hs.489284 NM_005720 ENSG00000130429 ARPC1B ARC41|PLTEID|p40-ARC|p41-ARC actin related protein 2/3 complex subunit 1B protein-coding chr12-1245 chr12 120709944 120710188 + 13.8 0.000 promoter-TSS (NM_001080533) promoter-TSS (NM_001080533) -392 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr16-1157 chr16 67538243 67538487 + 13.8 0.000 intron (NM_001193524, intron 1 of 21) CpG 903 NM_001193524 79567 Hs.152717 NM_024519 ENSG00000039523 RIPOR1 FAM65A RHO family interacting cell polarization regulator 1 protein-coding chr1-1740 chr1 41475365 41475609 + 13.8 0.000 Intergenic Intergenic 9196 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr4-483 chr4 792168 792412 + 13.8 0.000 intron (NM_006651, intron 3 of 3) intron (NM_006651, intron 3 of 3) -10442 NR_036512 100129917 Hs.731755 NR_036511 ENSG00000249592 LOC100129917 - uncharacterized LOC100129917 ncRNA chr15-650 chr15 53736313 53736557 + 13.8 0.000 intron (NR_102334, intron 1 of 19) intron (NR_102334, intron 1 of 19) 23228 NM_182758 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding chr7-932 chr7 32388491 32388735 + 13.8 0.000 intron (NM_001322059, intron 1 of 17) AluJo|SINE|Alu 39611 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr19-1050 chr19 2523746 2523990 + 13.8 0.000 intron (NM_052847, intron 3 of 4) intron (NM_052847, intron 3 of 4) 47741 NM_015675 4616 Hs.110571 NM_015675 ENSG00000099860 GADD45B GADD45BETA|MYD118 growth arrest and DNA damage inducible beta protein-coding chr21-219 chr21 46003634 46003878 + 13.8 0.000 exon (NM_001848, exon 35 of 35) exon (NM_001848, exon 35 of 35) 22007 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr9-1040 chr9 137045654 137045898 + 13.8 0.000 intron (NM_015392, intron 1 of 8) CpG 401 NM_015392 56654 Hs.719906 NM_015392 ENSG00000107281 NPDC1 CAB|CAB-|CAB-1|CAB1|NPDC-1 neural proliferation, differentiation and control 1 protein-coding chr1-2397 chr1 58546155 58546399 + 13.8 0.000 intron (NM_145243, intron 1 of 8) CpG 449 NM_145243 115209 Hs.425769 NM_145243 ENSG00000162600 OMA1 2010001O09Rik|DAB1|MPRP-1|MPRP1|YKR087C|ZMPOMA1|peptidase OMA1 zinc metallopeptidase protein-coding KN538366.1-1 KN538366.1 11192 11436 + 13.8 0.000 NA NA NA NA chr4-1105 chr4 172017822 172018066 + 13.8 0.000 intron (NM_001034845, intron 2 of 12) L1MA3|LINE|L1 -204337 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr5-728 chr5 17315772 17316016 + 13.8 0.000 Intergenic AluSz|SINE|Alu 71416 NR_033975 401177 Hs.508311 NR_033975 ENSG00000250822 LINC02111 - long intergenic non-protein coding RNA 2111 ncRNA chr15-731 chr15 86624616 86624860 + 13.8 0.000 intron (NM_152336, intron 22 of 24) intron (NM_152336, intron 22 of 24) -307770 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA chr16-771 chr16 1202013 1202257 + 13.8 0.000 exon (NM_021098, exon 9 of 35) exon (NM_021098, exon 9 of 35) 23133 NM_012467 25823 Hs.592076 NM_012467 ENSG00000116176 TPSG1 PRSS31|TMT|trpA tryptase gamma 1 protein-coding chr1-2017 chr1 32748696 32748940 + 13.8 0.000 intron (NM_020888, intron 1 of 6) intron (NM_020888, intron 1 of 6) -5181 NM_001369553 57648 Hs.591502 NM_020888 ENSG00000162522 KIAA1522 - KIAA1522 protein-coding chr3-1509 chr3 196601096 196601340 + 13.8 0.000 Intergenic L1MB3|LINE|L1 31369 NR_132101 101929769 Hs.518527 NR_132101 ENSG00000232065 LINC01063 - long intergenic non-protein coding RNA 1063 ncRNA chr17-491 chr17 43778323 43778567 + 13.8 0.000 intron (NM_004090, intron 1 of 2) CpG 532 NM_004090 1845 Hs.181046 NM_004090 ENSG00000108861 DUSP3 VHR dual specificity phosphatase 3 protein-coding chr19-1283 chr19 49312925 49313169 + 13.8 0.000 intron (NM_014037, intron 1 of 11) AluSx|SINE|Alu -4179 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA chr15-507 chr15 72487530 72487774 + 13.8 0.000 intron (NM_005744, intron 1 of 13) intron (NM_005744, intron 1 of 13) 13322 NM_005744 25820 Hs.268787 NM_005744 ENSG00000166233 ARIH1 ARI|HARI|HHARI|UBCH7BP ariadne RBR E3 ubiquitin protein ligase 1 protein-coding chr17-118 chr17 75784897 75785141 + 13.8 0.000 promoter-TSS (NR_039892) promoter-TSS (NR_039892) 180 NR_038131 85451 Hs.584768 NM_001080419 ENSG00000132478 UNK UNKEMPT|ZC3H5|ZC3HDC5 unk zinc finger protein-coding chr11-871 chr11 32583624 32583868 + 13.8 0.000 promoter-TSS (NM_001307929) promoter-TSS (NM_001307929) -85 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding chr1-2132 chr1 227946612 227946856 + 13.8 0.000 intron (NM_003395, intron 1 of 3) CpG 1198 NM_003395 7483 Hs.149504 NM_003395 ENSG00000143816 WNT9A WNT14 Wnt family member 9A protein-coding chr3-1313 chr3 56467168 56467412 + 13.8 0.000 intron (NR_132749, intron 1 of 17) intron (NR_132749, intron 1 of 17) 1177 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding chr21-271 chr21 46129542 46129786 + 13.6 0.000 3' UTR (NM_058175, exon 28 of 28) 3' UTR (NM_058175, exon 28 of 28) -21711 NM_001350598 100861507 Hs.570448 NM_001350598 FTCD-AS1 - FTCD antisense RNA 1 protein-coding chr12-715 chr12 132397378 132397622 + 13.6 0.000 Intergenic Intergenic 67650 NR_120467 101928416 NR_120467 ENSG00000255916 LOC101928416 - uncharacterized LOC101928416 ncRNA chr5-905 chr5 92713627 92713871 + 13.6 0.000 Intergenic Intergenic 857594 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA chr6-671 chr6 35601440 35601684 + 13.6 0.000 intron (NM_001145775, intron 6 of 11) intron (NM_001145775, intron 6 of 11) 63227 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA chr5-425 chr5 134710072 134710316 + 13.6 0.000 intron (NM_021982, intron 18 of 22) intron (NM_021982, intron 18 of 22) -28354 NM_001745 819 Hs.529846 NM_001745 ENSG00000164615 CAMLG CAML|GET2 calcium modulating ligand protein-coding chr7-942 chr7 44100440 44100684 + 13.6 0.000 Intergenic Intergenic -3783 NM_001129 165 Hs.439463 NM_001129 ENSG00000106624 AEBP1 ACLP AE binding protein 1 protein-coding chr22-188 chr22 47090899 47091143 + 13.6 0.000 intron (NM_001284305, intron 11 of 12) intron (NM_001284305, intron 11 of 12) -174979 NR_122047 642757 Hs.632786 NR_122047 ENSG00000280080 TBC1D22A-AS1 - TBC1D22A antisense RNA 1 ncRNA chr16-977 chr16 85715475 85715719 + 13.6 0.000 intron (NR_161452, intron 2 of 4) MER58A|DNA|hAT-Charlie 26103 NR_031731 100302261 NR_031731 ENSG00000283416 MIR1910 MIRN1910|hsa-mir-1910|mir-1910 microRNA 1910 ncRNA chr7-1285 chr7 45885530 45885774 + 13.6 0.000 Intergenic Intergenic -2836 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding chr6-491 chr6 13924396 13924640 + 13.6 0.000 promoter-TSS (NM_001165034) promoter-TSS (NM_001165034) 72 NM_001165034 221687 Hs.111164 NM_152737 ENSG00000180537 RNF182 - ring finger protein 182 protein-coding chr1-2463 chr1 100803358 100803602 + 13.6 0.000 Intergenic MER11A|LTR|ERVK 83738 NM_001078 7412 Hs.109225 NM_001078 ENSG00000162692 VCAM1 CD106|INCAM-100 vascular cell adhesion molecule 1 protein-coding chr22-469 chr22 20231178 20231422 + 13.6 0.000 Intergenic Intergenic 17911 NR_031618 100302118 NR_031618 ENSG00000221039 MIR1286 MIRN1286|hsa-mir-1286|mir-1286 microRNA 1286 ncRNA chr2-1797 chr2 113240876 113241120 + 13.6 0.000 TTS (NR_047570) TTS (NR_047570) 4729 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr11-1327 chr11 67753339 67753583 + 13.6 0.000 Intergenic Intergenic 51875 NR_024249 645332 Hs.535094 NR_024249 ENSG00000160172 FAM86C2P - family with sequence similarity 86, member A pseudogene pseudo chrX-302 chrX 53287544 53287788 + 13.6 0.000 intron (NM_001111125, intron 2 of 14) intron (NM_001111125, intron 2 of 14) -6082 NM_015075 23096 Hs.496138 NM_015075 ENSG00000124313 IQSEC2 BRAG1|IQ-ArfGEF|MRX1|MRX18|MRX78 IQ motif and Sec7 domain 2 protein-coding chr19-870 chr19 17539465 17539709 + 13.6 0.000 intron (NM_001098524, intron 8 of 15) CpG-14001 12318 NM_001321828 199786 Hs.434133 NM_173544 ENSG00000167483 NIBAN3 BCNP1|FAM129C niban apoptosis regulator 3 protein-coding chr5-248 chr5 172042950 172043194 + 13.6 0.000 3' UTR (NM_005990, exon 19 of 19) 3' UTR (NM_005990, exon 19 of 19) -36199 NM_033644 23291 Hs.484138 NM_012300 ENSG00000072803 FBXW11 BTRC2|BTRCP2|FBW1B|FBXW1B|Fbw11|Hos F-box and WD repeat domain containing 11 protein-coding chr9-1196 chr9 34574196 34574440 + 13.6 0.000 intron (NM_001842, intron 1 of 8) intron (NM_001842, intron 1 of 8) 6306 NR_024369 415056 Hs.734229 NR_024369 CNTFR-AS1 - CNTFR antisense RNA 1 ncRNA chr16-669 chr16 85088633 85088877 + 13.6 0.000 3' UTR (NM_014732, exon 13 of 13) 3' UTR (NM_014732, exon 13 of 13) 23717 NM_001366920 339145 Hs.125713 NM_198491 ENSG00000153789 FAM92B - family with sequence similarity 92 member B protein-coding chr9-1149 chr9 136959745 136959989 + 13.6 0.000 Intergenic Intergenic 7594 NM_178536 286256 Hs.440519 NM_178536 ENSG00000184925 LCN12 - lipocalin 12 protein-coding chr19-371 chr19 32298197 32298441 + 13.6 0.000 Intergenic AluSc8|SINE|Alu -47291 NM_014910 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr20-479 chr20 31460563 31460807 + 13.6 0.000 Intergenic Intergenic 12328 NM_001037500 245937 Hs.381373 NM_001037500 ENSG00000180383 DEFB124 DEFB-24 defensin beta 124 protein-coding chr3-773 chr3 133474285 133474529 + 13.6 0.000 intron (NM_003571, intron 6 of 6) MIR3|SINE|MIR 16739 NR_135277 85003 Hs.659202 NR_135276 ENSG00000249993 BFSP2-AS1 - BFSP2 antisense RNA 1 ncRNA chr1-497 chr1 112887940 112888184 + 13.6 0.000 Intergenic LTR67B|LTR|ERVL 6012 NR_162120 113218506 NR_162120 MIR11399 - microRNA 11399 ncRNA chr2-860 chr2 159124617 159124861 + 13.6 0.000 intron (NM_001350063, intron 4 of 24) intron (NM_001350063, intron 4 of 24) -62096 NR_106948 102465535 NR_106948 ENSG00000275141 MIR6888 hsa-mir-6888 microRNA 6888 ncRNA chr4-168 chr4 30720091 30720335 + 13.6 0.000 promoter-TSS (NM_032456) promoter-TSS (NM_032456) -156 NM_032456 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding chrX-432 chrX 30230228 30230472 + 13.6 0.000 promoter-TSS (NM_002365) promoter-TSS (NM_002365) -86 NM_002365 4114 Hs.113290 NM_002365 ENSG00000198798 MAGEB3 CT3.5 MAGE family member B3 protein-coding chr8-493 chr8 47708862 47709106 + 13.6 0.000 intron (NM_001080394, intron 14 of 19) AluSx1|SINE|Alu 29180 NM_005195 1052 Hs.440829 NM_005195 ENSG00000221869 CEBPD C/EBP-delta|CELF|CRP3|NF-IL6-beta CCAAT enhancer binding protein delta protein-coding chr17-1348 chr17 57553523 57553767 + 13.6 0.000 intron (NM_001322250, intron 7 of 13) intron (NM_001322250, intron 7 of 13) -30048 NR_110808 101927557 Hs.639984 NR_110808 ENSG00000266100 LOC101927557 - uncharacterized LOC101927557 ncRNA chrX-524 chrX 115536829 115537073 + 13.6 0.000 intron (NR_110383, intron 2 of 4) AluJb|SINE|Alu -24223 NM_005032 5358 Hs.496622 NM_005032 ENSG00000102024 PLS3 BMND18|T-plastin plastin 3 protein-coding chr6-996 chr6 52918316 52918560 + 13.6 0.000 Intergenic HERV17-int|LTR|ERV1 -8740 NM_000847 2940 Hs.102484 NM_000847 ENSG00000174156 GSTA3 GSTA3-3|GTA3 glutathione S-transferase alpha 3 protein-coding chr14-662 chr14 92534539 92534783 + 13.6 0.000 intron (NM_024832, intron 1 of 9) intron (NM_024832, intron 1 of 9) 20880 NM_024832 79890 Hs.326822 NM_024832 ENSG00000100599 RIN3 - Ras and Rab interactor 3 protein-coding chr10-1335 chr10 130555011 130555255 + 13.6 0.000 Intergenic Intergenic 407535 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr7-330 chr7 105876574 105876818 + 13.6 0.000 promoter-TSS (NM_020725) promoter-TSS (NM_020725) -111 NM_020725 222255 Hs.745056 NM_020725 ENSG00000146776 ATXN7L1 ATXN7L4 ataxin 7 like 1 protein-coding chr17-1181 chr17 79183560 79183804 + 13.6 0.000 intron (NM_001350453, intron 3 of 13) CpG 108745 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr11-815 chr11 76713589 76713833 + 13.6 0.000 intron (NR_024042, intron 6 of 20) G-rich|Low_complexity|Low_complexity 8078 NR_024042 390226 Hs.440026 NR_024042 GUCY2EP GC-E|GCD|GUCY2E guanylate cyclase 2E, pseudogene pseudo chr17-1359 chr17 59907993 59908237 + 13.6 0.000 intron (NM_001272044, intron 2 of 15) intron (NM_001272044, intron 2 of 15) 14994 NR_161457 6198 Hs.463642 NM_003161 ENSG00000108443 RPS6KB1 PS6K|S6K|S6K-beta-1|S6K1|STK14A|p70 S6KA|p70(S6K)-alpha|p70-S6K|p70-alpha ribosomal protein S6 kinase B1 protein-coding chr13-333 chr13 49400975 49401219 + 13.6 0.000 intron (NM_001079670, intron 3 of 10) intron (NM_001079670, intron 3 of 10) 445 NM_030925 81617 Hs.87159 NM_030925 ENSG00000102547 CAB39L MO25-BETA|MO2L|bA103J18.3 calcium binding protein 39 like protein-coding chr4-935 chr4 25610166 25610410 + 13.6 0.000 Intergenic L1ME3Cz|LINE|L1 -40942 NR_134641 101929161 Hs.125638 NR_134641 LOC101929161 - uncharacterized LOC101929161 ncRNA chr7-1288 chr7 47314899 47315143 + 13.6 0.000 intron (NM_022748, intron 20 of 30) intron (NM_022748, intron 20 of 30) 149782 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr22-439 chr22 31613837 31614081 + 13.6 0.000 intron (NM_001007467, intron 27 of 32) intron (NM_001007467, intron 27 of 32) 7572 NR_106959 102465666 NR_106959 ENSG00000284082 MIR7109 hsa-mir-7109 microRNA 7109 ncRNA chr4-709 chr4 82798829 82799073 + 13.6 0.000 promoter-TSS (NM_024906) promoter-TSS (NM_024906) -94 NM_024906 79966 Hs.379191 NM_024906 ENSG00000145284 SCD5 ACOD4|FADS4|HSCD5|SCD2|SCD4 stearoyl-CoA desaturase 5 protein-coding chr17-667 chr17 82386954 82387198 + 13.6 0.000 Intergenic Intergenic 12799 NM_018949 2837 Hs.192720 NM_018949 ENSG00000181408 UTS2R GPR14|UR-2-R|UTR|UTR2 urotensin 2 receptor protein-coding chr20-625 chr20 50931534 50931778 + 13.6 0.000 promoter-TSS (NM_181442) promoter-TSS (NM_181442) -219 NM_181442 23394 Hs.293736 NM_015339 ENSG00000101126 ADNP ADNP1|HVDAS|MRD28 activity dependent neuroprotector homeobox protein-coding chr8-445 chr8 42821619 42821863 + 13.6 0.000 Intergenic AluY|SINE|Alu 21584 NM_018105 55145 Hs.7432 NM_018105 ENSG00000131931 THAP1 DYT6 THAP domain containing 1 protein-coding chr4-907 chr4 5445820 5446064 + 13.6 0.000 intron (NM_001306082, intron 7 of 12) intron (NM_001306082, intron 7 of 12) -78627 NR_126519 10141 Hs.177972 NM_005750 ENSG00000082929 LINC01587 C4orf6|aC1 long intergenic non-protein coding RNA 1587 ncRNA chrX-548 chrX 131880849 131881093 + 13.6 0.000 Intergenic L1MD1|LINE|L1 -50328 NR_026975 286467 Hs.720385 NR_026975 ENSG00000213468 FIRRE LINC01200 firre intergenic repeating RNA element ncRNA chr20-396 chr20 1894488 1894732 + 13.6 0.000 promoter-TSS (NM_080792) promoter-TSS (NM_080792) -132 NM_080792 140885 Hs.581021 NM_080792 ENSG00000198053 SIRPA BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP signal regulatory protein alpha protein-coding chr22-489 chr22 36506286 36506530 + 13.6 0.000 exon (NM_001102371, exon 2 of 9) exon (NM_001102371, exon 2 of 9) 632 NM_001363041 80020 Hs.387601 NM_024955 ENSG00000100350 FOXRED2 ERFAD FAD dependent oxidoreductase domain containing 2 protein-coding chr22-572 chr22 30635660 30635904 + 13.6 0.000 promoter-TSS (NM_001318370) promoter-TSS (NM_001318370) 1 NM_001318371 339665 Hs.660384 NM_001001479 ENSG00000100036 SLC35E4 - solute carrier family 35 member E4 protein-coding chr3-935 chr3 28916630 28916874 + 13.6 0.000 Intergenic Intergenic 341474 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA chr19-1643 chr19 47494955 47495199 + 13.6 0.000 non-coding (NR_038452, exon 3 of 4) non-coding (NR_038452, exon 3 of 4) 10795 NR_038452 100505681 Hs.657320 NR_038452 ENSG00000268061 NAPA-AS1 - NAPA antisense RNA 1 ncRNA chrX-511 chrX 105475794 105476038 + 13.6 0.000 intron (NM_017416, intron 5 of 10) intron (NM_017416, intron 5 of 10) -255223 NM_031274 56157 Hs.567543 NM_031274 ENSG00000268629 TEX13A - testis expressed 13A protein-coding chr19-1492 chr19 7908922 7909166 + 13.6 0.000 intron (NM_001297555, intron 2 of 11) intron (NM_001297555, intron 2 of 11) 5167 NM_001297555 5609 Hs.531754 NM_145185 ENSG00000076984 MAP2K7 JNKK2|MAPKK7|MEK|MEK 7|MKK7|PRKMK7|SAPKK-4|SAPKK4 mitogen-activated protein kinase kinase 7 protein-coding chr22-739 chr22 47252223 47252467 + 13.6 0.000 Intergenic L2c|LINE|L2 -93226 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA chr7-1118 chr7 74094019 74094263 + 13.6 0.000 intron (NM_001204426, intron 1 of 14) intron (NM_001204426, intron 1 of 14) 924 NM_001204426 3984 Hs.647035 NM_002314 ENSG00000106683 LIMK1 LIMK|LIMK-1 LIM domain kinase 1 protein-coding chr1-2186 chr1 3146680 3146924 + 13.6 0.000 intron (NM_022114, intron 1 of 16) (GT)n|Simple_repeat|Simple_repeat 18827 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr2-1891 chr2 191486993 191487237 + 13.6 0.000 Intergenic Intergenic -190957 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding chr8-867 chr8 48071301 48071545 + 13.6 0.000 Intergenic Intergenic 62992 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding chr1-1651 chr1 10629824 10630068 + 13.6 0.000 exon (NM_004565, exon 9 of 9) exon (NM_004565, exon 9 of 9) 154996 NM_004565 5195 Hs.149983 NM_004565 ENSG00000142655 PEX14 NAPP2|PBD13A|Pex14p|dJ734G22.2 peroxisomal biogenesis factor 14 protein-coding chr3-1232 chr3 22713946 22714190 + 13.6 0.000 Intergenic MER44B|DNA|TcMar-Tigger 488510 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA chr11-1033 chr11 126431788 126432032 + 13.6 0.000 intron (NM_001301097, intron 12 of 15) intron (NM_001301097, intron 12 of 15) 25823 NM_001254759 6484 Hs.591947 NM_006278 ENSG00000110080 ST3GAL4 CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST-4|ST3GalA.2|ST3GalIV|STZ|gal-NAc6S ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein-coding chr19-419 chr19 18442086 18442330 + 13.6 0.000 TTS (NM_006532) TTS (NM_006532) -4075 NM_016368 51477 Hs.405873 NM_016368 ENSG00000105655 ISYNA1 INO1|INOS|IPS|IPS 1|IPS-1 inositol-3-phosphate synthase 1 protein-coding chr2-987 chr2 134120721 134120965 + 13.6 0.000 intron (NM_001371457, intron 1 of 16) CpG 908 NM_001371457 chr17-260 chr17 42347086 42347330 + 13.6 0.000 intron (NM_001369512, intron 2 of 23) AluSx1|SINE|Alu 41234 NM_001369513 6774 Hs.463059 NM_003150 ENSG00000168610 STAT3 ADMIO|ADMIO1|APRF|HIES signal transducer and activator of transcription 3 protein-coding chr19-1561 chr19 19656974 19657218 + 13.6 0.000 exon (NM_020410, exon 5 of 26) exon (NM_020410, exon 5 of 26) 6580 NM_020410 57130 Hs.501794 NM_020410 ENSG00000105726 ATP13A1 ATP13A|CGI-152 ATPase 13A1 protein-coding chr18-315 chr18 23238659 23238903 + 13.6 0.000 intron (NM_001256438, intron 7 of 9) intron (NM_001256438, intron 7 of 9) 82956 NM_138375 91768 Hs.11108 NM_138375 ENSG00000134508 CABLES1 CABL1|CABLES|HsT2563|IK3-1 Cdk5 and Abl enzyme substrate 1 protein-coding chr13-486 chr13 74762008 74762252 + 13.6 0.000 Intergenic Intergenic 209287 NR_034025 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA chr18-260 chr18 80257791 80258035 + 13.6 0.000 Intergenic LTR13|LTR|ERVK -10399 NM_032510 84552 Hs.654920 NM_032510 ENSG00000178184 PARD6G PAR-6G|PAR6gamma par-6 family cell polarity regulator gamma protein-coding chr11-632 chr11 104164079 104164323 + 13.6 0.000 promoter-TSS (NM_033135) promoter-TSS (NM_033135) -54 NM_033135 80310 Hs.352298 NM_025208 ENSG00000170962 PDGFD IEGF|MSTP036|SCDGF-B|SCDGFB platelet derived growth factor D protein-coding chr16-1047 chr16 3014260 3014504 + 13.6 0.000 TTS (NM_021195) TTS (NM_021195) 1459 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr19-1475 chr19 5115660 5115904 + 13.6 0.000 intron (NM_015015, intron 10 of 22) intron (NM_015015, intron 10 of 22) 146669 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr9-1005 chr9 134267941 134268185 + 13.6 0.000 Intergenic Intergenic 27334 NR_146518 105376310 Hs.573484 NR_146518 ENSG00000223729 LINC02247 - long intergenic non-protein coding RNA 2247 ncRNA chr16-901 chr16 89619878 89620122 + 13.6 0.000 promoter-TSS (NM_004413) promoter-TSS (NM_004413) -597 NM_004413 1800 Hs.109 NM_004413 ENSG00000015413 DPEP1 MBD1|MDP|RDP dipeptidase 1 protein-coding chr12-733 chr12 25963114 25963358 + 13.6 0.000 intron (NM_001164748, intron 1 of 4) intron (NM_001164748, intron 1 of 4) -3794 NR_038228 100506451 Hs.560092 NR_038227 RASSF8-AS1 - RASSF8 antisense RNA 1 ncRNA chr20-574 chr20 32538525 32538769 + 13.6 0.000 intron (NM_001256798, intron 1 of 10) intron (NM_001256798, intron 1 of 10) 28688 NR_110619 101929698 Hs.638392 NR_110619 ENSG00000277301 LOC101929698 - uncharacterized LOC101929698 ncRNA chr1-1729 chr1 36098064 36098308 + 13.6 0.000 exon (NM_001294347, exon 4 of 4) exon (NM_001294347, exon 4 of 4) 9294 NM_017825 54936 Hs.18021 NM_017825 ENSG00000116863 ADPRHL2 ARH3|CONDSIAS ADP-ribosylhydrolase like 2 protein-coding chr4-283 chr4 1248452 1248696 + 13.6 0.000 promoter-TSS (NR_033339) promoter-TSS (NR_033339) 556 NM_001012614 1487 Hs.208597 NM_001328 ENSG00000159692 CTBP1 BARS|HADDTS C-terminal binding protein 1 protein-coding chr1-2342 chr1 36837266 36837510 + 13.6 0.000 intron (NM_000831, intron 10 of 15) intron (NM_000831, intron 10 of 15) 197127 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding chr1-1047 chr1 85259742 85259986 + 13.6 0.000 promoter-TSS (NM_198077) promoter-TSS (NM_198077) -202 NM_198077 148423 Hs.26226 NM_198077 ENSG00000162642 C1orf52 gm117 chromosome 1 open reading frame 52 protein-coding chr22-347 chr22 26589931 26590175 + 13.6 0.000 promoter-TSS (NM_001362922) promoter-TSS (NM_001362922) 79 NM_001362922 8459 Hs.632768 NM_003595 ENSG00000128294 TPST2 TANGO13B|TPST-2 tyrosylprotein sulfotransferase 2 protein-coding chr10-1210 chr10 82288852 82289096 + 13.6 0.000 intron (NM_001370082, intron 3 of 10) intron (NM_001370082, intron 3 of 10) -56054 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA chr5-903 chr5 89980302 89980546 + 13.6 0.000 Intergenic AluSx|SINE|Alu 36296 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA chr2-1680 chr2 42906930 42907174 + 13.6 0.000 Intergenic Intergenic -114469 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding chr22-635 chr22 27224411 27224655 + 13.6 0.000 exon (NM_001350812, exon 1 of 3) exon (NM_001350812, exon 1 of 3) 146 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding chr1-1934 chr1 226083130 226083374 + 13.6 0.000 promoter-TSS (NR_146920) promoter-TSS (NR_146920) -323 NR_146920 105373113 Hs.149726 NR_146920 LINC01703 lncPARP1 long intergenic non-protein coding RNA 1703 ncRNA chr15-142 chr15 65133133 65133377 + 13.6 0.000 exon (NM_005707, exon 1 of 5) exon (NM_005707, exon 1 of 5) 553 NM_005707 10081 Hs.458596 NM_005707 ENSG00000090470 PDCD7 ES18|HES18 programmed cell death 7 protein-coding chr22-596 chr22 46630034 46630278 + 13.6 0.000 intron (NM_015124, intron 2 of 18) AluSz6|SINE|Alu 9770 NM_015124 23151 Hs.475150 NM_015124 ENSG00000075240 GRAMD4 DIP GRAM domain containing 4 protein-coding chr3-1058 chr3 175777556 175777800 + 13.6 0.000 intron (NM_207015, intron 13 of 13) intron (NM_207015, intron 13 of 13) -1345 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA chr1-1639 chr1 6248092 6248336 + 13.6 0.000 3' UTR (NM_207370, exon 6 of 6) 3' UTR (NM_207370, exon 6 of 6) 4035 NM_001024598 390992 Hs.532677 NM_001024598 ENSG00000173673 HES3 bHLHb43 hes family bHLH transcription factor 3 protein-coding chr17-1398 chr17 75240670 75240914 + 13.6 0.000 intron (NM_001291642, intron 8 of 13) intron (NM_001291642, intron 8 of 13) 20814 NM_001291641 23163 Hs.87726 NM_014001 ENSG00000125447 GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 protein-coding chr13-371 chr13 113209623 113209867 + 13.6 0.000 exon (NM_001354943, exon 1 of 6) exon (NM_001354943, exon 1 of 6) 132 NM_001354943 8451 Hs.339735 NM_003589 ENSG00000139842 CUL4A - cullin 4A protein-coding chr2-631 chr2 163950385 163950629 + 13.6 0.000 Intergenic MLT1F2|LTR|ERVL-MaLR -214499 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding chr19-1247 chr19 41897790 41898034 + 13.6 0.000 intron (NM_198977, intron 12 of 27) intron (NM_198977, intron 12 of 27) 13469 NM_199002 9138 Hs.631550 NM_004706 ENSG00000076928 ARHGEF1 GEF1|IMD62|LBCL2|LSC|P115-RHOGEF|SUB1.5 Rho guanine nucleotide exchange factor 1 protein-coding chr7-1317 chr7 74338824 74339068 + 13.6 0.000 exon (NM_003388, exon 3 of 17) exon (NM_003388, exon 3 of 17) 49471 NM_003388 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chr5-814 chr5 146862927 146863171 + 13.6 0.000 intron (NM_181678, intron 2 of 10) intron (NM_181678, intron 2 of 10) 15736 NR_073526 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding chr16-935 chr16 28092775 28093019 + 13.6 0.000 Intergenic Intergenic -29183 NM_001109763 146395 Hs.91910 NM_144675 ENSG00000169181 GSG1L PRO19651 GSG1 like protein-coding chr1-846 chr1 64966344 64966588 + 13.5 0.000 promoter-TSS (NM_001321855) promoter-TSS (NM_001321855) 83 NM_001321857 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr5-357 chr5 170861969 170862213 + 13.5 0.000 promoter-TSS (NM_022897) promoter-TSS (NM_022897) 73 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr7-1314 chr7 73699949 73700193 + 13.5 0.000 3' UTR (NM_004603, exon 10 of 10) 3' UTR (NM_004603, exon 10 of 10) -11246 NR_036247 100422948 NR_036247 ENSG00000265724 MIR4284 mir-4284 microRNA 4284 ncRNA chr10-833 chr10 49760236 49760480 + 13.5 0.000 intron (NM_001347823, intron 1 of 21) intron (NM_001347823, intron 1 of 21) 1641 NM_001347819 55753 Hs.17860 NM_018245 ENSG00000197444 OGDHL - oxoglutarate dehydrogenase like protein-coding chr11-836 chr11 197537 197781 + 13.5 0.000 exon (NM_001286136, exon 3 of 6) exon (NM_001286136, exon 3 of 6) 898 NM_001286136 113746 Hs.350949 NM_053280 ENSG00000177947 ODF3 CT135|SHIPPO1|TISP50 outer dense fiber of sperm tails 3 protein-coding chr12-1029 chr12 2733801 2734045 + 13.5 0.000 Intergenic Intergenic -42766 NR_045725 100652846 Hs.683896 NR_045725 ENSG00000246627 CACNA1C-AS1 - CACNA1C antisense RNA 1 ncRNA chrX-331 chrX 124343913 124344157 + 13.5 0.000 Intergenic Intergenic -2247 NM_001114937 4068 Hs.349094 NM_002351 ENSG00000183918 SH2D1A DSHP|EBVS|IMD5|LYP|MTCP1|SAP|SAP/SH2D1A|XLP|XLPD|XLPD1 SH2 domain containing 1A protein-coding chr17-841 chr17 4718624 4718868 + 13.5 0.000 intron (NM_001257329, intron 11 of 14) intron (NM_001257329, intron 11 of 14) 8114 NM_001257331 409 Hs.435811 NM_004313 ENSG00000141480 ARRB2 ARB2|ARR2|BARR2 arrestin beta 2 protein-coding chr19-1564 chr19 23765976 23766220 + 13.5 0.000 intron (NR_149352, intron 1 of 1) intron (NR_149352, intron 1 of 1) 3094 NR_149352 388524 Hs.560655 NM_001005472 RPSAP58 RPSA_30_1642 ribosomal protein SA pseudogene 58 protein-coding chr1-1471 chr1 3458453 3458697 + 13.5 0.000 intron (NM_014448, intron 1 of 14) intron (NM_014448, intron 1 of 14) 3910 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr17-835 chr17 83154769 83155013 + 13.5 0.000 Intergenic Intergenic -72006 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo chr1-1653 chr1 11005347 11005591 + 13.5 0.000 Intergenic L1MC5a|LINE|L1 -7153 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding chr7-1212 chr7 5495073 5495317 + 13.5 0.000 TTS (NR_030318) TTS (NR_030318) 722 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr6-925 chr6 21801373 21801617 + 13.5 0.000 intron (NR_015410, intron 3 of 11) intron (NR_015410, intron 3 of 11) 135082 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA chr5-523 chr5 1787422 1787666 + 13.5 0.000 Intergenic Intergenic 12293 NM_032479 64979 Hs.719465 NM_032479 ENSG00000171421 MRPL36 BRIP1|L36mt|MRP-L36|PRPL36|RPMJ mitochondrial ribosomal protein L36 protein-coding chr1-2573 chr1 180409721 180409965 + 13.5 0.000 intron (NM_032360, intron 5 of 7) Tigger1|DNA|TcMar-Tigger 28547 NR_036067 100423032 NR_036067 ENSG00000265435 MIR3121 mir-3121 microRNA 3121 ncRNA chr4-912 chr4 7876553 7876797 + 13.5 0.000 intron (NM_198595, intron 1 of 16) MLT1O|LTR|ERVL-MaLR -4367 NM_001371090 chr10-424 chr10 80453841 80454085 + 13.5 0.000 promoter-TSS (NM_001351267) promoter-TSS (NM_001351267) -302 NM_001128309 81619 Hs.308615 NM_030927 ENSG00000108219 TSPAN14 DC-TM4F2|TM4SF14|tspan-14 tetraspanin 14 protein-coding chr12-1105 chr12 50070570 50070814 + 13.5 0.000 intron (NM_020039, intron 3 of 11) intron (NM_020039, intron 3 of 11) -2893 NM_001256830 41 Hs.274361 NM_001095 ENSG00000110881 ASIC1 ACCN2|ASIC|BNaC2 acid sensing ion channel subunit 1 protein-coding chr12-218 chr12 19439576 19439820 + 13.5 0.000 promoter-TSS (NM_001267043) promoter-TSS (NM_001267043) 206 NM_001363736 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr4-1104 chr4 171813478 171813722 + 13.5 0.000 promoter-TSS (NR_134656) promoter-TSS (NR_134656) 7 NR_134656 441052 Hs.386236 NR_134656 LOC441052 - uncharacterized LOC441052 ncRNA chr10-488 chr10 132406838 132407082 + 13.5 0.000 intron (NM_138499, intron 2 of 2) intron (NM_138499, intron 2 of 2) 9760 NM_001098637 170394 Hs.527751 NM_138499 ENSG00000171813 PWWP2B PWWP2|bA432J24.1|pp8607 PWWP domain containing 2B protein-coding chr19-804 chr19 17841881 17842125 + 13.5 0.000 intron (NM_000215, intron 6 of 23) CpG-14019 6029 NM_000215 3718 Hs.515247 NM_000215 ENSG00000105639 JAK3 JAK-3|JAK3_HUMAN|JAKL|L-JAK|LJAK Janus kinase 3 protein-coding chr1-2545 chr1 163769128 163769372 + 13.5 0.000 Intergenic Intergenic -346059 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo chr16-602 chr16 89066737 89066981 + 13.5 0.000 Intergenic Intergenic -26950 NM_001243279 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chrX-177 chrX 48597694 48597938 + 13.5 0.000 non-coding (NR_029427, exon 1 of 9) non-coding (NR_029427, exon 1 of 9) 324 NM_001347219 64743 Hs.521973 NM_017883 ENSG00000101940 WDR13 MG21 WD repeat domain 13 protein-coding chr17-1411 chr17 76307817 76308061 + 13.5 0.000 promoter-TSS (NR_130649) promoter-TSS (NR_130649) -259 NR_130649 84074 Hs.252739 NM_032134 ENSG00000129646 QRICH2 SPGF35 glutamine rich 2 protein-coding chr14-670 chr14 102772292 102772536 + 13.5 0.000 Intergenic AluJo|SINE|Alu -5035 NM_001199427 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr4-659 chr4 3499414 3499658 + 13.5 0.000 intron (NM_001363811, intron 6 of 7) intron (NM_001363811, intron 6 of 7) 14992 NM_001256896 285489 Hs.122110 NM_173660 ENSG00000175920 DOK7 C4orf25|CMS10|CMS1B|FADS3 docking protein 7 protein-coding chr17-1166 chr17 68138887 68139131 + 13.5 0.000 Intergenic L1ME1|LINE|L1 37454 NR_027418 100499466 Hs.591212 NR_027418 LINC00674 - long intergenic non-protein coding RNA 674 ncRNA chr14-567 chr14 88189359 88189603 + 13.5 0.000 intron (NM_138317, intron 5 of 6) intron (NM_138317, intron 5 of 6) 81430 NM_138318 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding chr6-427 chr6 149717767 149718011 + 13.5 0.000 non-coding (NR_134652, exon 1 of 1) non-coding (NR_134652, exon 1 of 1) 212 NM_001350392 9113 Hs.549084 NM_004690 ENSG00000131023 LATS1 WARTS|wts large tumor suppressor kinase 1 protein-coding chr4-715 chr4 88283779 88284023 + 13.5 0.000 intron (NM_152542, intron 1 of 6) CpG 660 NM_152542 152926 Hs.43744 NM_152542 ENSG00000163644 PPM1K BDP|MSUDMV|PP2Ckappa|PP2Cm|PTMP|UG0882E07 protein phosphatase, Mg2+/Mn2+ dependent 1K protein-coding chr1-1491 chr1 19283976 19284220 + 13.5 0.000 exon (NM_012067, exon 6 of 7) exon (NM_012067, exon 6 of 7) 4672 NM_012067 22977 Hs.6980 NM_012067 ENSG00000162482 AKR7A3 AFAR2 aldo-keto reductase family 7 member A3 protein-coding chr11-1479 chr11 46381100 46381344 + 13.5 0.000 promoter-TSS (NR_073039) promoter-TSS (NR_073039) 154 NM_001012334 4192 Hs.82045 NM_002391 ENSG00000110492 MDK ARAP|MK|NEGF2 midkine protein-coding chr12-1177 chr12 92013591 92013835 + 13.5 0.000 intron (NR_132341, intron 1 of 4) L1PA16|LINE|L1 128000 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA chr12-395 chr12 9650703 9650947 + 13.5 0.000 intron (NR_046444, intron 1 of 4) intron (NR_046444, intron 1 of 4) 2778 NR_046446 374443 Hs.569124 NR_002814 ENSG00000256594 LOC374443 - C-type lectin domain family 2 member D pseudogene pseudo chr4-689 chr4 40018461 40018705 + 13.5 0.000 Intergenic AluY|SINE|Alu -38267 NM_001318359 55728 Hs.391463 NM_018177 ENSG00000078177 N4BP2 B3BP NEDD4 binding protein 2 protein-coding chr4-885 chr4 1829387 1829631 + 13.5 0.000 intron (NM_012318, intron 6 of 13) L1MDa|LINE|L1 26647 NM_012318 3954 Hs.120165 NM_012318 ENSG00000168924 LETM1 SLC55A1 leucine zipper and EF-hand containing transmembrane protein 1 protein-coding chrX-136 chrX 41276351 41276595 + 13.5 0.000 non-coding (NR_135616, exon 2 of 2) non-coding (NR_135616, exon 2 of 2) 734 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr22-529 chr22 45502480 45502724 + 13.5 0.000 promoter-TSS (NM_001996) promoter-TSS (NM_001996) -281 NM_001996 2192 Hs.24601 NM_001996 ENSG00000077942 FBLN1 FBLN|FIBL1 fibulin 1 protein-coding chr10-1044 chr10 110356529 110356773 + 13.5 0.000 Intergenic Intergenic -51731 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr11-1532 chr11 65109344 65109588 + 13.5 0.000 exon (NM_013265, exon 6 of 10) exon (NM_013265, exon 6 of 10) -2388 NR_102367 7108 Hs.31130 NM_003273 ENSG00000149809 TM7SF2 ANG1|C14SR|DHCR14A|NET47 transmembrane 7 superfamily member 2 protein-coding chr12-1281 chr12 131784372 131784616 + 13.5 0.000 intron (NM_004592, intron 14 of 17) intron (NM_004592, intron 14 of 17) -43899 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr22-127 chr22 20122845 20123089 + 13.5 0.000 intron (NM_001278641, intron 3 of 5) intron (NM_001278641, intron 3 of 5) -3435 NR_145765 109617010 NR_145765 ENSG00000264346 SNORA77B - small nucleolar RNA, H/ACA box 77B snoRNA chr16-1181 chr16 79607643 79607887 + 13.5 0.000 Intergenic L3|LINE|CR1 -7028 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding chr9-509 chr9 34137572 34137816 + 13.5 0.000 Intergenic SVA_D|Retroposon|SVA -10996 NM_015397 25853 Hs.493750 NM_015397 ENSG00000198876 DCAF12 CT102|KIAA1892|TCC52|WDR40A DDB1 and CUL4 associated factor 12 protein-coding chr4-417 chr4 67034423 67034667 + 13.5 0.000 Intergenic AluSc|SINE|Alu 387455 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr18-203 chr18 44772099 44772343 + 13.5 0.000 intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 91333 NM_015559 26040 Hs.435458 NM_015559 ENSG00000152217 SETBP1 MRD29|SEB SET binding protein 1 protein-coding chr1-1499 chr1 29455889 29456133 + 13.5 0.000 Intergenic L2a|LINE|L2 -105897 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA KI270442.1-7 KI270442.1 232909 233153 + 13.5 0.000 NA NA NA NA chr16-1061 chr16 7653655 7653899 + 13.5 0.000 intron (NM_145893, intron 8 of 13) intron (NM_145893, intron 8 of 13) 320932 NM_145892 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr3-1061 chr3 183698200 183698444 + 13.5 0.000 intron (NM_001351371, intron 1 of 21) intron (NM_001351371, intron 1 of 21) 504 NM_001351370 55689 Hs.632575 NM_018023 ENSG00000163872 YEATS2 - YEATS domain containing 2 protein-coding chr16-1049 chr16 3029930 3030174 + 13.5 0.000 intron (NM_001103175, intron 4 of 8) MIR|SINE|MIR -2429 NR_047572 100128770 Hs.666223 NR_047572 ENSG00000205890 LOC100128770 - uncharacterized LOC100128770 ncRNA chr1-1949 chr1 234863125 234863369 + 13.5 0.000 Intergenic Intergenic 100752 NR_125945 101927851 Hs.520684 NR_125945 ENSG00000238005 LOC101927851 - uncharacterized LOC101927851 ncRNA chr10-548 chr10 110398716 110398960 + 13.5 0.000 Intergenic Intergenic -93918 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding chr3-1139 chr3 87855562 87855806 + 13.5 0.000 intron (NM_001322210, intron 2 of 2) Tigger7|DNA|TcMar-Tigger 62978 NM_001322208 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding chr7-1119 chr7 75733169 75733413 + 13.5 0.000 intron (NM_005338, intron 1 of 30) MIRc|SINE|MIR 5650 NM_005338 3092 Hs.329266 NM_005338 ENSG00000127946 HIP1 HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma huntingtin interacting protein 1 protein-coding chr15-716 chr15 80160691 80160935 + 13.5 0.000 intron (NM_000137, intron 4 of 13) intron (NM_000137, intron 4 of 13) 7814 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding chr7-802 chr7 1167522 1167766 + 13.5 0.000 Intergenic FLAM_C|SINE|Alu 6859 NR_110070 101927021 Hs.529566 NR_110065 LOC101927021 - uncharacterized LOC101927021 ncRNA chr1-1621 chr1 1632064 1632308 + 13.5 0.000 promoter-TSS (NR_002946) promoter-TSS (NR_002946) 13 NM_006983 8510 Hs.192316 NM_006983 ENSG00000189409 MMP23B MIFR|MIFR-1|MMP22|MMP23A matrix metallopeptidase 23B protein-coding chr9-863 chr9 21994679 21994923 + 13.5 0.000 promoter-TSS (NM_058195) promoter-TSS (NM_058195) 10 NR_047541 100048912 Hs.493614 NR_003529 ENSG00000240498 CDKN2B-AS1 ANRIL|CDKN2B-AS|CDKN2BAS|NCRNA00089|PCAT12|p15AS CDKN2B antisense RNA 1 ncRNA chr6-1053 chr6 119127165 119127409 + 13.5 0.000 intron (NM_001288576, intron 1 of 15) MLT1E3|LTR|ERVL-MaLR 21906 NM_001288576 79632 Hs.443789 NM_024581 ENSG00000111879 FAM184A C6orf60 family with sequence similarity 184 member A protein-coding chr8-724 chr8 17001453 17001697 + 13.5 0.000 intron (NM_019851, intron 1 of 2) CpG 770 NM_019851 26281 Hs.199905 NM_019851 ENSG00000078579 FGF20 FGF-20|RHDA2 fibroblast growth factor 20 protein-coding chr11-1330 chr11 71831305 71831549 + 13.5 0.000 Intergenic SVA_C|Retroposon|SVA -1773 NM_001002035 245911 Hs.555032 NM_001002035 ENSG00000184276 DEFB108B DEFB-8|hBD-8 defensin beta 108B protein-coding chr7-1365 chr7 101636735 101636979 + 13.5 0.000 Intergenic Intergenic -7561 NM_138403 93408 Hs.247831 NM_138403 ENSG00000106436 MYL10 MYLC2PL|PLRLC myosin light chain 10 protein-coding chr20-356 chr20 63551498 63551742 + 13.5 0.000 Intergenic AluSq|SINE|Alu -1400 NM_024059 79025 Hs.197755 NM_024059 ENSG00000125531 FNDC11 C20orf195 fibronectin type III domain containing 11 protein-coding chr9-880 chr9 35576391 35576635 + 13.5 0.000 Intergenic MER66-int|LTR|ERV1 -12635 NM_001164310 730112 Hs.98959 NM_001099951 ENSG00000215187 FAM166B - family with sequence similarity 166 member B protein-coding chr20-538 chr20 14336857 14337101 + 13.5 0.000 intron (NM_198391, intron 1 of 2) intron (NM_198391, intron 1 of 2) 633 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding chr19-1547 chr19 18312081 18312325 + 13.5 0.000 intron (NM_012321, intron 3 of 4) intron (NM_012321, intron 3 of 4) 10873 NM_012321 25804 Hs.515255 NM_012321 ENSG00000130520 LSM4 GRP|YER112W LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chr4-823 chr4 74157579 74157823 + 13.3 0.000 promoter-TSS (NM_001351314) promoter-TSS (NM_001351314) -407 NM_001144978 441024 Hs.721011 NM_001004346 ENSG00000163738 MTHFD2L - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like protein-coding chr3-1378 chr3 112428476 112428720 + 13.3 0.000 Intergenic MSTD-int|LTR|ERVL-MaLR 70874 NM_001085357 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding chr18-361 chr18 75249526 75249770 + 13.3 0.000 intron (NM_001308210, intron 1 of 1) intron (NM_001308210, intron 1 of 1) 38119 NM_001308210 10194 Hs.284217 NM_005786 ENSG00000179981 TSHZ1 CAA|NY-CO-33|SDCCAG33|TSH1 teashirt zinc finger homeobox 1 protein-coding chr13-516 chr13 99735228 99735472 + 13.3 0.000 intron (NR_104592, intron 1 of 9) AluJr|SINE|Alu -6349 NR_120383 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA chr22-679 chr22 37775849 37776093 + 13.3 0.000 3' UTR (NM_007032, exon 14 of 14) 3' UTR (NM_007032, exon 14 of 14) -29136 NM_005318 3005 Hs.745024 NM_005318 ENSG00000189060 H1F0 H10|H1FV H1 histone family member 0 protein-coding chr15-735 chr15 88623205 88623449 + 13.3 0.000 intron (NM_022767, intron 1 of 3) intron (NM_022767, intron 1 of 3) 1987 NM_022767 64782 Hs.436102 NM_022767 ENSG00000181026 AEN ISG20L1|pp12744 apoptosis enhancing nuclease protein-coding chr3-1264 chr3 46097989 46098233 + 13.3 0.000 Intergenic MER5A1|DNA|hAT-Charlie -70628 NM_001024644 2829 Hs.128375 NM_005283 ENSG00000173578 XCR1 CCXCR1|GPR5 X-C motif chemokine receptor 1 protein-coding chr14-650 chr14 76901153 76901397 + 13.3 0.000 Intergenic MLT1O|LTR|ERVL-MaLR -58363 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA chr9-959 chr9 124122838 124123082 + 13.3 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 111192 NM_004789 9355 Hs.696425 NM_004789 ENSG00000106689 LHX2 LH2|hLhx2 LIM homeobox 2 protein-coding chr3-1336 chr3 67636141 67636385 + 13.3 0.000 intron (NM_001177599, intron 1 of 10) intron (NM_001177599, intron 1 of 10) 18351 NM_001177599 8801 Hs.644919 NM_003848 ENSG00000172340 SUCLG2 G-SCS|GBETA|GTPSCS succinate-CoA ligase GDP-forming beta subunit protein-coding chr16-804 chr16 23788335 23788579 + 13.3 0.000 Intergenic Intergenic 33431 NM_022097 63928 Hs.178589 NM_022097 ENSG00000166869 CHP2 - calcineurin like EF-hand protein 2 protein-coding chr14-594 chr14 104709301 104709545 + 13.3 0.000 intron (NM_001031714, intron 11 of 21) intron (NM_001031714, intron 11 of 21) -14774 NM_152328 122622 Hs.592327 NM_152328 ENSG00000185100 ADSSL1 Adss1|MPD5 adenylosuccinate synthase like 1 protein-coding chr16-1178 chr16 78169068 78169312 + 13.3 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 69536 NR_120436 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr14-806 chr14 104144324 104144568 + 13.3 0.000 intron (NM_015656, intron 2 of 14) intron (NM_015656, intron 2 of 14) 5723 NM_015656 26153 Hs.134970 NM_015656 ENSG00000066735 KIF26A - kinesin family member 26A protein-coding chr4-248 chr4 183444397 183444641 + 13.3 0.000 promoter-TSS (NM_017632) promoter-TSS (NM_017632) -117 NM_001317343 55602 Hs.592508 NM_017632 ENSG00000168564 CDKN2AIP CARF CDKN2A interacting protein protein-coding chr5-1019 chr5 43000107 43000351 + 13.3 0.000 Intergenic Intergenic -6896 NR_104643 643977 Hs.535791 NR_104643 FLJ32255 - uncharacterized LOC643977 ncRNA chr3-1300 chr3 52399971 52400215 + 13.3 0.000 TTS (NM_004656) TTS (NM_004656) 9915 NM_004656 8314 Hs.106674 NM_004656 ENSG00000163930 BAP1 HUCEP-13|UCHL2|hucep-6 BRCA1 associated protein 1 protein-coding chrX-297 chrX 51894492 51894736 + 13.3 0.000 intron (NM_006986, intron 2 of 12) intron (NM_006986, intron 2 of 12) 991 NM_001005333 9500 Hs.5258 NM_006986 ENSG00000179222 MAGED1 DLXIN-1|NRAGE MAGE family member D1 protein-coding chr16-821 chr16 56034851 56035095 + 13.3 0.000 Intergenic L1MD1|LINE|L1 -78942 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr22-494 chr22 37510902 37511146 + 13.3 0.000 intron (NM_014550, intron 3 of 19) AluSx|SINE|Alu 8391 NM_014550 29775 Hs.57973 NM_014550 ENSG00000100065 CARD10 BIMP1|CARMA3 caspase recruitment domain family member 10 protein-coding chr6-569 chr6 158167519 158167763 + 13.3 0.000 promoter-TSS (NM_207118) promoter-TSS (NM_207118) 621 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr2-314 chr2 32325507 32325751 + 13.3 0.000 Intergenic Intergenic -31399 NM_016252 57448 Hs.150107 NM_016252 ENSG00000115760 BIRC6 APOLLON|BRUCE baculoviral IAP repeat containing 6 protein-coding chr2-1621 chr2 20141549 20141793 + 13.3 0.000 Intergenic Intergenic 83459 NM_002997 6382 Hs.224607 NM_002997 ENSG00000115884 SDC1 CD138|SDC|SYND1|syndecan syndecan 1 protein-coding chr14-426 chr14 73851093 73851337 + 13.3 0.000 promoter-TSS (NR_163921) promoter-TSS (NR_163921) -616 NM_001371327 chr3-835 chr3 49686678 49686922 + 13.3 0.000 non-coding (NR_146060, exon 7 of 17) non-coding (NR_146060, exon 7 of 17) 1963 NM_020998 4485 Hs.349110 NM_020998 ENSG00000173531 MST1 D3F15S2|DNF15S2|HGFL|MSP|NF15S2 macrophage stimulating 1 protein-coding chr3-245 chr3 12877636 12877880 + 13.3 0.000 intron (NR_136189, intron 2 of 2) intron (NR_136189, intron 2 of 2) 7453 NR_136189 105376955 Hs.561179 NR_136189 ENSG00000232746 LINC02022 - long intergenic non-protein coding RNA 2022 ncRNA chr8-650 chr8 78380469 78380713 + 13.3 0.000 Intergenic L1MA6|LINE|L1 -135749 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding chr12-752 chr12 57243681 57243925 + 13.3 0.000 non-coding (NR_104422, exon 8 of 8) non-coding (NR_104422, exon 8 of 8) -3111 NM_020142 56901 Hs.75069 NM_020142 ENSG00000185633 NDUFA4L2 NUOMS NDUFA4 mitochondrial complex associated like 2 protein-coding chr19-1131 chr19 647062 647306 + 13.3 0.000 TTS (NM_001366018) TTS (NM_001366018) 7258 NM_020637 27006 Hs.248087 NM_020637 ENSG00000070388 FGF22 - fibroblast growth factor 22 protein-coding chr13-345 chr13 78215762 78216006 + 13.3 0.000 intron (NR_047001, intron 2 of 5) intron (NR_047001, intron 2 of 5) 161029 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA chr10-165 chr10 930969 931213 + 13.3 0.000 intron (NM_001351277, intron 1 of 17) (CCGGCC)n|Simple_repeat|Simple_repeat 614 NM_015155 23185 Hs.159069 NM_015155 ENSG00000107929 LARP4B KIAA0217|LARP5 La ribonucleoprotein domain family member 4B protein-coding chr21-126 chr21 24327818 24328062 + 13.3 0.000 Intergenic Intergenic -6563 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA chr10-581 chr10 70290747 70290991 + 13.3 0.000 Intergenic MLT1A|LTR|ERVL-MaLR -6865 NM_022146 64106 Hs.302026 NM_022146 ENSG00000148734 NPFFR1 GPR147|NPFF1|NPFF1R1|OT7T022 neuropeptide FF receptor 1 protein-coding chr2-907 chr2 26971112 26971356 + 13.3 0.000 intron (NM_012326, intron 1 of 6) intron (NM_012326, intron 1 of 6) 597 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr6-83 chr6 132474094 132474338 + 13.3 0.000 intron (NM_001326579, intron 3 of 9) AluJb|SINE|Alu 38567 NM_001326578 8417 Hs.593148 NM_003569 ENSG00000079950 STX7 - syntaxin 7 protein-coding chr2-1298 chr2 120540389 120540633 + 13.3 0.000 Intergenic Intergenic -74162 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr17-1015 chr17 62171158 62171402 + 13.3 0.000 Intergenic Intergenic 104375 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo chr6-751 chr6 155248441 155248685 + 13.3 0.000 intron (NM_001010927, intron 6 of 12) intron (NM_001010927, intron 6 of 12) -15450 NM_001001346 49861 Hs.567491 NM_001001346 ENSG00000171217 CLDN20 - claudin 20 protein-coding chr5-689 chr5 141849692 141849936 + 13.3 0.000 Intergenic CpG 16388 NM_001278615 5097 Hs.79769 NM_002587 ENSG00000156453 PCDH1 PC42|PCDH42 protocadherin 1 protein-coding chr12-516 chr12 48755729 48755973 + 13.3 0.000 intron (NM_001351125, intron 2 of 4) intron (NM_001351125, intron 2 of 4) 16186 NR_039850 100616262 NR_039850 ENSG00000264201 MIR4701 - microRNA 4701 ncRNA chr13-322 chr13 36999348 36999592 + 13.3 0.000 promoter-TSS (NM_001142364) promoter-TSS (NM_001142364) -103 NM_001142364 29880 Hs.507769 NM_013338 ENSG00000120697 ALG5 bA421P11.2 ALG5 dolichyl-phosphate beta-glucosyltransferase protein-coding chr10-790 chr10 13897758 13898002 + 13.3 0.000 intron (NM_018027, intron 2 of 24) AluSx1|SINE|Alu 74016 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr6-600 chr6 41779487 41779731 + 13.3 0.000 intron (NM_006653, intron 1 of 6) intron (NM_006653, intron 1 of 6) 291 NM_006653 10817 Hs.194208 NM_006653 ENSG00000137218 FRS3 FRS2-beta|FRS2B|FRS2beta|SNT-2|SNT2 fibroblast growth factor receptor substrate 3 protein-coding chr1-1775 chr1 69911241 69911485 + 13.3 0.000 intron (NM_001370785, intron 7 of 26) L1PA15|LINE|L1 -7959 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo KI270729.1-3 KI270729.1 22409 22653 + 13.3 0.000 NA NA NA NA chrX-555 chrX 135703656 135703900 + 13.3 0.000 Intergenic AluJo|SINE|Alu -9675 NM_001017417 541466 Hs.460937 NM_001017417 ENSG00000268940 CT45A1 CT45|CT45-1|CT45.1 cancer/testis antigen family 45 member A1 protein-coding GL000216.2-12 GL000216.2 168623 168867 + 13.3 0.000 NA NA NA NA chr12-1198 chr12 104523455 104523699 + 13.3 0.000 intron (NM_018413, intron 1 of 2) MIRc|SINE|MIR 66629 NM_018413 50515 Hs.17569 NM_018413 ENSG00000171310 CHST11 C4ST|C4ST-1|C4ST1|HSA269537|OCBMD carbohydrate sulfotransferase 11 protein-coding chr2-1947 chr2 223062388 223062632 + 13.3 0.000 Intergenic L2c|LINE|L2 10580 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding chr17-1021 chr17 64776545 64776789 + 13.3 0.000 intron (NR_026899, intron 3 of 12) intron (NR_026899, intron 3 of 12) -4092 NR_106728 102464831 NR_106728 ENSG00000278581 MIR6080 hsa-mir-6080 microRNA 6080 ncRNA chr2-1879 chr2 182504923 182505167 + 13.3 0.000 intron (NM_005019, intron 1 of 14) intron (NM_005019, intron 1 of 14) 17481 NM_005019 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding chr17-1117 chr17 19867571 19867815 + 13.3 0.000 5' UTR (NM_001142610, exon 1 of 28) 5' UTR (NM_001142610, exon 1 of 28) 243 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr1-1732 chr1 36519199 36519443 + 13.3 0.000 Intergenic Intergenic -36007 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr17-1232 chr17 7703563 7703807 + 13.3 0.000 TTS (NM_001143990) TTS (NM_001143990) -1517 NM_001406 1949 Hs.26988 NM_001406 ENSG00000108947 EFNB3 EFL6|EPLG8|LERK8 ephrin B3 protein-coding chr4-467 chr4 104102295 104102539 + 13.3 0.000 Intergenic AluY|SINE|Alu -382432 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding chr2-1215 chr2 29113434 29113678 + 13.3 0.000 intron (NM_001287528, intron 1 of 14) intron (NM_001287528, intron 1 of 14) -1322 NR_109844 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding chr7-1127 chr7 85898082 85898326 + 13.3 0.000 Intergenic L2a|LINE|L2 477082 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA chr12-350 chr12 116819314 116819558 + 13.3 0.000 intron (NM_001109903, intron 7 of 11) CpG 62005 NR_073189 8739 Hs.26605 NM_003806 ENSG00000135116 HRK DP5|HARAKIRI harakiri, BCL2 interacting protein protein-coding chr19-652 chr19 1001034 1001278 + 13.3 0.000 intron (NM_138690, intron 1 of 8) intron (NM_138690, intron 1 of 8) 737 NM_138690 116444 Hs.660378 NM_138690 ENSG00000116032 GRIN3B GluN3B|NR3B glutamate ionotropic receptor NMDA type subunit 3B protein-coding chr21-128 chr21 33884664 33884908 + 13.3 0.000 intron (NM_001331010, intron 35 of 38) intron (NM_001331010, intron 35 of 38) 31018 NM_001697 539 Hs.409140 NM_001697 ENSG00000241837 ATP5PO ATP5O|ATPO|HMC08D05|OSCP ATP synthase peripheral stalk subunit OSCP protein-coding chrX-512 chrX 107712691 107712935 + 13.3 0.000 TTS (NM_001318470) TTS (NM_001318470) 3695 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr8-787 chr8 135457111 135457355 + 13.3 0.000 promoter-TSS (NM_006558) promoter-TSS (NM_006558) -223 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding chr5-950 chr5 172412947 172413191 + 13.3 0.000 intron (NM_001017995, intron 2 of 12) intron (NM_001017995, intron 2 of 12) 41454 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr9-1165 chr9 4662893 4663137 + 13.3 0.000 promoter-TSS (NM_001353487) promoter-TSS (NM_001353487) 721 NM_203453 403313 Hs.107510 NM_203453 ENSG00000205808 PLPP6 PDP1|PPAPDC2|PSDP|bA6J24.6 phospholipid phosphatase 6 protein-coding chr12-380 chr12 125715650 125715894 + 13.3 0.000 Intergenic AluJr|SINE|Alu 93320 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr16-1145 chr16 66904377 66904621 + 13.3 0.000 Intergenic Intergenic 14386 NM_001204745 1014 Hs.513660 NM_004062 ENSG00000166589 CDH16 - cadherin 16 protein-coding chr2-1092 chr2 61446070 61446314 + 13.3 0.000 intron (NM_014709, intron 1 of 79) intron (NM_014709, intron 1 of 79) 24895 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding chr1-1615 chr1 1422135 1422379 + 13.3 0.000 promoter-TSS (NM_001243535) promoter-TSS (NM_001243535) -813 NM_001145210 441869 Hs.381222 NM_001145210 ENSG00000235098 ANKRD65 - ankyrin repeat domain 65 protein-coding chr11-1594 chr11 75315103 75315347 + 13.3 0.000 intron (NM_004041, intron 1 of 15) MER54A|LTR|ERVL 19961 NR_029891 442900 NR_029891 ENSG00000199090 MIR326 MIRN326|hsa-mir-326|mir-326 microRNA 326 ncRNA chrX-273 chrX 153726091 153726335 + 13.3 0.000 intron (NM_000033, intron 1 of 9) CpG-30165 1357 NM_000033 215 Hs.159546 NM_000033 ENSG00000101986 ABCD1 ABC42|ALD|ALDP|AMN ATP binding cassette subfamily D member 1 protein-coding chr8-808 chr8 18084964 18085208 + 13.3 0.000 promoter-TSS (NM_001127505) promoter-TSS (NM_001127505) -125 NM_001127505 427 Hs.527412 NM_004315 ENSG00000104763 ASAH1 AC|ACDase|ASAH|PHP|PHP32|SMAPME N-acylsphingosine amidohydrolase 1 protein-coding chr1-1277 chr1 15680150 15680394 + 13.3 0.000 Intergenic L2|LINE|L2 -4048 NM_015164 23207 Hs.646775 NM_015164 ENSG00000116786 PLEKHM2 SKIP pleckstrin homology and RUN domain containing M2 protein-coding chr17-1085 chr17 82436775 82437019 + 13.3 0.000 intron (NM_173620, intron 7 of 11) intron (NM_173620, intron 7 of 11) 12829 NM_001193655 79415 Hs.163113 NM_001033046 ENSG00000178927 CYBC1 C17orf62|Eros cytochrome b-245 chaperone 1 protein-coding chr9-1267 chr9 98169168 98169412 + 13.3 0.000 intron (NM_052820, intron 1 of 11) intron (NM_052820, intron 1 of 11) 3602 NM_003389 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding chr2-1546 chr2 202254387 202254631 + 13.3 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat -11254 NM_015934 51602 Hs.471104 NM_015934 ENSG00000055044 NOP58 HSPC120|NOP5|NOP5/NOP58 NOP58 ribonucleoprotein protein-coding chr1-1923 chr1 222713285 222713529 + 13.3 0.000 promoter-TSS (NM_001288580) promoter-TSS (NM_001288580) 86 NM_001288580 148362 Hs.534965 NM_144695 ENSG00000162819 BROX C1orf58 BRO1 domain and CAAX motif containing protein-coding chr3-1066 chr3 185642879 185643123 + 13.3 0.000 TTS (NM_001291874) TTS (NM_001291874) 56706 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr2-1240 chr2 52998946 52999190 + 13.3 0.000 Intergenic MER67D|LTR|ERV1 -296453 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA chr1-2115 chr1 209827557 209827801 + 13.3 0.000 promoter-TSS (NM_014388) promoter-TSS (NM_014388) -293 NM_014388 27042 Hs.194754 NM_014388 ENSG00000117597 UTP25 C1orf107|DEF|DIEXF|DJ434O14.5 UTP25 small subunit processor component protein-coding chr1-2089 chr1 168164583 168164827 + 13.3 0.000 Intergenic Intergenic -14257 NM_152902 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding chr9-1194 chr9 34254166 34254410 + 13.3 0.000 3' UTR (NM_194313, exon 13 of 13) 3' UTR (NM_194313, exon 13 of 13) 74980 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding chr5-1101 chr5 132180201 132180445 + 13.3 0.000 Intergenic Intergenic -4553 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chrX-240 chrX 30640103 30640347 + 13.3 0.000 Intergenic MLT1H|LTR|ERVL-MaLR -13134 NM_001205019 2710 Hs.1466 NM_000167 ENSG00000198814 GK GK1|GKD glycerol kinase protein-coding chr12-920 chr12 132415019 132415263 + 13.3 0.000 Intergenic Intergenic -75010 NM_001367871 57666 Hs.411138 NM_001142641 ENSG00000112787 FBRSL1 - fibrosin like 1 protein-coding chr2-1541 chr2 199940479 199940723 + 13.3 0.000 intron (NM_001039693, intron 3 of 7) AluJo|SINE|Alu -14716 NM_001369399 79568 Hs.154494 NM_024520 ENSG00000162972 MAIP1 C2orf47 matrix AAA peptidase interacting protein 1 protein-coding chr2-1338 chr2 176160454 176160698 + 13.3 0.000 intron (NM_006898, intron 1 of 3) intron (NM_006898, intron 1 of 3) 3269 NM_006898 3232 Hs.93574 NM_006898 ENSG00000128652 HOXD3 HOX1D|HOX4|HOX4A|Hox-4.1 homeobox D3 protein-coding chr5-842 chr5 172897299 172897543 + 13.3 0.000 intron (NM_001031711, intron 3 of 9) AluSx1|SINE|Alu -17662 NR_162113 113218510 NR_162113 MIR10523 - microRNA 10523 ncRNA chr20-355 chr20 63312915 63313159 + 13.3 0.000 intron (NM_020882, intron 16 of 35) intron (NM_020882, intron 16 of 35) 19851 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr6-848 chr6 127267460 127267704 + 13.3 0.000 intron (NM_001242852, intron 1 of 4) intron (NM_001242852, intron 1 of 4) 744 NM_001242850 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding chr2-1769 chr2 96892307 96892551 + 13.3 0.000 intron (NM_001122646, intron 14 of 16) intron (NM_001122646, intron 14 of 16) 2733 NM_001172667 51252 Hs.107922 NM_016490 ENSG00000168754 FAM178B - family with sequence similarity 178 member B protein-coding chr2-1031 chr2 218568858 218569102 + 13.3 0.000 promoter-TSS (NM_020935) promoter-TSS (NM_020935) 141 NM_001271634 9125 Hs.148767 NM_005444 ENSG00000144580 CNOT9 CAF40|CT129|RCD-1|RCD1|RQCD1 CCR4-NOT transcription complex subunit 9 protein-coding chr16-668 chr16 84964176 84964420 + 13.3 0.000 Intergenic Intergenic 47237 NM_017740 55625 Hs.461610 NM_017740 ENSG00000153786 ZDHHC7 DHHC7|SERZ-B|SERZ1|ZNF370 zinc finger DHHC-type containing 7 protein-coding chr4-896 chr4 2806591 2806835 + 13.3 0.000 intron (NM_001122681, intron 1 of 12) intron (NM_001122681, intron 1 of 12) -5578 NM_001145855 6452 Hs.167679 NM_003023 ENSG00000087266 SH3BP2 3BP-2|3BP2|CRBM|CRPM|RES4-23 SH3 domain binding protein 2 protein-coding chr22-358 chr22 45268294 45268538 + 13.3 0.000 Intergenic Intergenic -16533 NM_001167574 7380 Hs.632787 NM_006953 ENSG00000100373 UPK3A UP3A|UPIII|UPIIIA|UPK3 uroplakin 3A protein-coding chr6-881 chr6 169962036 169962280 + 13.3 0.000 promoter-TSS (NR_027434) promoter-TSS (NR_027434) -465 NR_027434 100131532 Hs.703417 NR_027434 LOC100131532 - uncharacterized LOC100131532 ncRNA chr10-1027 chr10 96833389 96833633 + 13.2 0.000 intron (NM_001170766, intron 2 of 8) CpG 566 NM_032440 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr9-433 chr9 107637907 107638151 + 13.2 0.000 Intergenic CpG -148260 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr11-1486 chr11 47389559 47389803 + 13.2 0.000 Intergenic Intergenic -11134 NM_001080547 6688 Hs.502511 NM_003120 ENSG00000066336 SPI1 OF|PU.1|SFPI1|SPI-1|SPI-A Spi-1 proto-oncogene protein-coding chr2-1864 chr2 168531139 168531383 + 13.2 0.000 intron (NM_001256126, intron 1 of 10) Plat_L3|LINE|CR1 -51682 NR_039933 100616356 NR_039933 ENSG00000265694 MIR4774 - microRNA 4774 ncRNA chr14-324 chr14 70188690 70188934 + 13.2 0.000 non-coding (NR_104122, exon 1 of 6) non-coding (NR_104122, exon 1 of 6) 139 NM_182932 6547 Hs.337696 NM_033262 ENSG00000100678 SLC8A3 NCX3 solute carrier family 8 member A3 protein-coding chr20-469 chr20 3227729 3227973 + 13.2 0.000 TTS (NM_001324240) TTS (NM_001324240) 9876 NM_032034 83959 Hs.105607 NM_032034 ENSG00000088836 SLC4A11 BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2 solute carrier family 4 member 11 protein-coding chr19-1327 chr19 4026450 4026694 + 13.2 0.000 intron (NM_015897, intron 3 of 10) L1MB7|LINE|L1 18836 NM_015897 51588 Hs.105779 NM_015897 ENSG00000105229 PIAS4 PIAS-gamma|PIASY|Piasg|ZMIZ6 protein inhibitor of activated STAT 4 protein-coding chr1-1132 chr1 11681226 11681470 + 13.2 0.000 promoter-TSS (NM_006341) promoter-TSS (NM_006341) -200 NM_006341 10459 Hs.19400 NM_006341 ENSG00000116670 MAD2L2 FANCV|MAD2B|POLZ2|REV7 mitotic arrest deficient 2 like 2 protein-coding chrX-517 chrX 110402482 110402726 + 13.2 0.000 intron (NM_001171689, intron 2 of 7) intron (NM_001171689, intron 2 of 7) -16453 NM_020769 57529 Hs.201071 NM_020769 ENSG00000243978 RTL9 MAR9|MART9|RGAG1|SIRH10 retrotransposon Gag like 9 protein-coding chr11-476 chr11 78448946 78449190 + 13.2 0.000 intron (NM_024678, intron 11 of 13) intron (NM_024678, intron 11 of 13) -19232 NR_120564 101928865 Hs.407574 NR_120564 ENSG00000251323 LINC02728 - long intergenic non-protein coding RNA 2728 ncRNA chr1-2040 chr1 55275992 55276236 + 13.2 0.000 Intergenic Intergenic 50473 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA chr12-528 chr12 56783549 56783793 + 13.2 0.000 intron (NM_003725, intron 3 of 4) SVA_D|Retroposon|SVA 20347 NM_003725 8630 Hs.524513 NM_003725 ENSG00000025423 HSD17B6 HSE|RODH|SDR9C6 hydroxysteroid 17-beta dehydrogenase 6 protein-coding KI270770.1-1 KI270770.1 12371 12615 + 13.2 0.000 NA NA NA NA chrY-19 chrY 11314796 11315040 + 13.2 0.000 Intergenic LSAU|Satellite|Satellite 1106672 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr1-2290 chr1 22212331 22212575 + 13.2 0.000 Intergenic L2b|LINE|L2 -53786 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chrX-88 chrX 17013541 17013785 + 13.2 0.000 intron (NM_001080975, intron 2 of 17) (TG)n|Simple_repeat|Simple_repeat 67005 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr20-108 chr20 347555 347799 + 13.2 0.000 promoter-TSS (NM_001323685) promoter-TSS (NM_001323685) -228 NM_001323685 80023 Hs.416024 NM_024958 ENSG00000125841 NRSN2 C20orf98|dJ1103G7.6 neurensin 2 protein-coding chr3-457 chr3 158572596 158572840 + 13.2 0.000 intron (NM_001369781, intron 1 of 5) intron (NM_001369781, intron 1 of 5) 1524 NM_001195432 4291 Hs.85195 NM_022443 ENSG00000178053 MLF1 - myeloid leukemia factor 1 protein-coding chr21-153 chr21 44312042 44312286 + 13.2 0.000 exon (NM_002626, exon 4 of 22) exon (NM_002626, exon 4 of 22) 12111 NM_001002021 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr3-1218 chr3 12193381 12193625 + 13.2 0.000 Intergenic Intergenic -34591 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr6-875 chr6 158707320 158707564 + 13.2 0.000 intron (NM_001242394, intron 7 of 17) intron (NM_001242394, intron 7 of 17) 44039 NM_001318745 94120 Hs.436977 NM_001009991 ENSG00000164674 SYTL3 SLP3 synaptotagmin like 3 protein-coding chr5-938 chr5 149053270 149053514 + 13.2 0.000 intron (NM_024577, intron 1 of 16) intron (NM_024577, intron 1 of 16) 9017 NR_030310 693169 NR_030310 ENSG00000207714 MIR584 MIRN584|hsa-mir-584 microRNA 584 ncRNA chr22-726 chr22 45880910 45881154 + 13.2 0.000 Intergenic CpG 96130 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr7-1115 chr7 73596313 73596557 + 13.2 0.000 exon (NM_032954, exon 12 of 17) exon (NM_032954, exon 12 of 17) -17856 NM_001362661 26608 Hs.647044 NM_012453 ENSG00000106638 TBL2 WBSCR13|WS-betaTRP transducin beta like 2 protein-coding chr13-396 chr13 73059488 73059732 + 13.2 0.000 intron (NM_001730, intron 1 of 3) CpG 605 NM_001730 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr11-1503 chr11 61746523 61746767 + 13.2 0.000 3' UTR (NM_006133, exon 20 of 20) 3' UTR (NM_006133, exon 20 of 20) -5991 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr20-570 chr20 32277591 32277835 + 13.2 0.000 promoter-TSS (NM_004798) promoter-TSS (NM_004798) 62 NM_004798 9371 Hs.369670 NM_004798 ENSG00000101350 KIF3B FLA8|HH0048|KLP-11 kinesin family member 3B protein-coding chr4-598 chr4 57098998 57099242 + 13.2 0.000 intron (NM_001553, intron 1 of 4) OldhAT1|DNA|hAT-Ac -10642 NR_034081 255130 Hs.691061 NR_034081 ENSG00000245067 IGFBP7-AS1 - IGFBP7 antisense RNA 1 ncRNA chr9-1199 chr9 36907490 36907734 + 13.2 0.000 intron (NR_103999, intron 6 of 8) intron (NR_103999, intron 6 of 8) -14081 NR_039687 100616456 NR_039687 ENSG00000265368 MIR4476 mir-4476 microRNA 4476 ncRNA chr10-1147 chr10 44776274 44776518 + 13.2 0.000 Intergenic Intergenic -134920 NM_001345926 643236 Hs.292788 NM_001123376 ENSG00000187783 TMEM72 C10orf127|KSP37 transmembrane protein 72 protein-coding chr3-361 chr3 183919223 183919467 + 13.2 0.000 TTS (NM_005688) TTS (NM_005688) 32545 NR_039650 100616127 NR_039650 ENSG00000263932 MIR4448 - microRNA 4448 ncRNA chr10-770 chr10 133357715 133357959 + 13.2 0.000 intron (NM_001301828, intron 1 of 5) CpG-3676 182 NM_001098483 282969 Hs.155823 NM_198472 ENSG00000148803 FUOM C10orf125|FUCU|FucM fucose mutarotase protein-coding chr6-1112 chr6 158086266 158086510 + 13.2 0.000 intron (NM_003898, intron 22 of 26) intron (NM_003898, intron 22 of 26) 69295 NM_001178088 8871 Hs.434494 NM_003898 ENSG00000078269 SYNJ2 INPP5H synaptojanin 2 protein-coding chr22-181 chr22 35343298 35343542 + 13.2 0.000 intron (NR_156428, intron 11 of 13) (CA)n|Simple_repeat|Simple_repeat -6621 NR_106717 102464824 NR_106717 ENSG00000274280 MIR6069 hsa-mir-6069 microRNA 6069 ncRNA chr19-1062 chr19 5829573 5829817 + 13.2 0.000 TTS (NM_000150) TTS (NM_000150) 5893 NM_004558 4902 Hs.234775 NM_004558 ENSG00000171119 NRTN NTN neurturin protein-coding chr2-1956 chr2 227472399 227472643 + 13.2 0.000 TTS (NR_049888) TTS (NR_049888) 349 NM_004504 3267 Hs.352962 NM_004504 ENSG00000173744 AGFG1 HRB|RAB|RIP ArfGAP with FG repeats 1 protein-coding chr11-867 chr11 22829687 22829931 + 13.2 0.000 promoter-TSS (NR_135213) promoter-TSS (NR_135213) -8 NM_001320342 258010 Hs.349096 NM_148893 ENSG00000198168 SVIP - small VCP interacting protein protein-coding chr15-580 chr15 73825748 73825992 + 13.2 0.000 Intergenic AluY|SINE|Alu -47694 NM_153356 161514 Hs.124512 NM_153356 ENSG00000167139 TBC1D21 MgcRabGAP TBC1 domain family member 21 protein-coding chr17-1106 chr17 5124638 5124882 + 13.2 0.000 5' UTR (NM_001304284, exon 5 of 38) 5' UTR (NM_001304284, exon 5 of 38) -1644 NM_014519 7775 Hs.279914 NM_014519 ENSG00000167840 ZNF232 ZSCAN11 zinc finger protein 232 protein-coding chr3-435 chr3 5392742 5392986 + 13.2 0.000 Intergenic AluJb|SINE|Alu -142609 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA KI270832.1-1 KI270832.1 145653 145897 + 13.2 0.000 NA NA NA NA chr7-511 chr7 45130665 45130909 + 13.2 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -19040 NM_001261834 9238 Hs.231411 NM_004749 ENSG00000136270 TBRG4 CPR2|FASTKD4 transforming growth factor beta regulator 4 protein-coding chr22-727 chr22 45924854 45925098 + 13.2 0.000 intron (NM_058238, intron 3 of 3) intron (NM_058238, intron 3 of 3) 52186 NM_058238 7477 Hs.512714 NM_058238 ENSG00000188064 WNT7B - Wnt family member 7B protein-coding chr7-1324 chr7 76358244 76358488 + 13.2 0.000 intron (NM_012479, intron 1 of 1) CpG 625 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding chr1-1536 chr1 109483882 109484126 + 13.2 0.000 promoter-TSS (NM_001350175) promoter-TSS (NM_001350175) 45 NM_001350177 127002 Hs.118248 NM_153340 ENSG00000162650 ATXN7L2 - ataxin 7 like 2 protein-coding chr3-1256 chr3 43105985 43106229 + 13.2 0.000 promoter-TSS (NM_032806) promoter-TSS (NM_032806) -28 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding chr17-220 chr17 78802057 78802301 + 13.2 0.000 intron (NM_001321291, intron 17 of 20) CpG -19837 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chrX-339 chrX 136128134 136128378 + 13.2 0.000 Intergenic AluSc|SINE|Alu -18446 NR_027621 2273 Hs.435369 NM_001449 ENSG00000022267 FHL1 FCMSU|FHL-1|FHL1A|FHL1B|FLH1A|KYOT|RBMX1A|RBMX1B|SLIM|SLIM-1|SLIM1|SLIMMER|XMPMA four and a half LIM domains 1 protein-coding chr7-1069 chr7 1693385 1693629 + 13.2 0.000 intron (NM_001128636, intron 1 of 2) intron (NM_001128636, intron 1 of 2) 5388 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding chr18-333 chr18 43577139 43577383 + 13.2 0.000 Intergenic LTR16B|LTR|ERVL -299771 NM_020783 6860 Hs.8059 NM_020783 ENSG00000132872 SYT4 HsT1192 synaptotagmin 4 protein-coding chr7-778 chr7 102611931 102612175 + 13.2 0.000 intron (NM_001277335, intron 1 of 19).2 intron (NM_001277335, intron 1 of 19).2 4703 NM_001367767 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr12-48 chr12 131918693 131918937 + 13.2 0.000 intron (NM_003565, intron 23 of 27) intron (NM_003565, intron 23 of 27) -10461 NM_001002020 80324 Hs.592004 NM_025215 ENSG00000177192 PUS1 MLASA1 pseudouridine synthase 1 protein-coding chr3-1184 chr3 184580731 184580975 + 13.2 0.000 exon (NM_004443, exon 13 of 16) exon (NM_004443, exon 13 of 16) 19068 NM_004443 2049 Hs.2913 NM_004443 ENSG00000182580 EPHB3 EK2|ETK2|HEK2|TYRO6 EPH receptor B3 protein-coding chr11-1543 chr11 65790845 65791089 + 13.2 0.000 promoter-TSS (NR_108085) promoter-TSS (NR_108085) -99 NR_108085 101927828 Hs.666246 NR_108085 ENSG00000255120 OVOL1-AS1 - OVOL1 antisense RNA 1 ncRNA chr20-395 chr20 1301014 1301258 + 13.2 0.000 intron (NM_001318234, intron 6 of 6) intron (NM_001318234, intron 6 of 6) 12537 NM_015685 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding chr12-1035 chr12 3286204 3286448 + 13.2 0.000 3' UTR (NM_006675, exon 9 of 9) 3' UTR (NM_006675, exon 9 of 9) 79796 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr19-1216 chr19 18657843 18658087 + 13.2 0.000 intron (NM_001345983, intron 1 of 2) intron (NM_001345983, intron 1 of 2) 13327 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr20-622 chr20 50172424 50172668 + 13.2 0.000 promoter-TSS (NR_109943) promoter-TSS (NR_109943) -24 NR_109943 101927541 Hs.570391 NR_109943 ENSG00000231742 LINC01273 - long intergenic non-protein coding RNA 1273 ncRNA chr17-1059 chr17 79730874 79731118 + 13.2 0.000 promoter-TSS (NM_178543) promoter-TSS (NM_178543) 53 NM_178543 339221 Hs.114084 NM_178543 ENSG00000182156 ENPP7 ALK-SMase|E-NPP 7|NPP-7|NPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 protein-coding chr2-856 chr2 127219699 127219943 + 13.2 0.000 intron (NM_001367502, intron 1 of 8) CpG 478 NM_001367501 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr10-1017 chr10 75403495 75403739 + 13.2 0.000 promoter-TSS (NR_024422) promoter-TSS (NR_024422) -139 NR_024422 100131213 Hs.534598 NR_024421 ENSG00000237149 ZNF503-AS2 C10orf41|NCRNA00245 ZNF503 antisense RNA 2 ncRNA chr17-988 chr17 45087649 45087893 + 13.2 0.000 intron (NM_021079, intron 3 of 11) intron (NM_021079, intron 3 of 11) 26454 NM_021079 4836 Hs.532790 NM_021079 ENSG00000136448 NMT1 NMT N-myristoyltransferase 1 protein-coding chr18-237 chr18 46071996 46072240 + 13.2 0.000 intron (NM_024430, intron 1 of 14) CpG 142 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding chr6-799 chr6 41639386 41639630 + 13.2 0.000 intron (NM_001300805, intron 2 of 3) intron (NM_001300805, intron 2 of 3) 1040 NM_001300805 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr9-1269 chr9 98706794 98707038 + 13.2 0.000 intron (NM_005458, intron 1 of 18) intron (NM_005458, intron 1 of 18) 2019 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding chr10-1194 chr10 74364722 74364966 + 13.2 0.000 intron (NM_001369124, intron 4 of 9) intron (NM_001369124, intron 4 of 9) 164480 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA chr15-211 chr15 98875300 98875544 + 13.2 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 90996 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr3-926 chr3 12955064 12955308 + 13.2 0.000 intron (NM_001134382, intron 1 of 13) intron (NM_001134382, intron 1 of 13) 12544 NM_014869 9922 Hs.475506 NM_014869 ENSG00000144711 IQSEC1 ARF-GEP100|ARFGEP100|BRAG2|GEP100 IQ motif and Sec7 domain 1 protein-coding chr3-1001 chr3 120439104 120439348 + 13.2 0.000 intron (NM_007085, intron 2 of 10) intron (NM_007085, intron 2 of 10) 11766 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding chr18-183 chr18 57435240 57435484 + 13.2 0.000 promoter-TSS (NM_004852) promoter-TSS (NM_004852) -12 NM_004852 9480 Hs.194725 NM_004852 ENSG00000119547 ONECUT2 OC-2|OC2 one cut homeobox 2 protein-coding chr9-945 chr9 116208879 116209123 + 13.2 0.000 intron (NM_002581, intron 3 of 21) MER20|DNA|hAT-Charlie 55210 NM_002581 5069 Hs.643599 NM_002581 ENSG00000182752 PAPPA ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1 pappalysin 1 protein-coding chr18-265 chr18 10140515 10140759 + 13.2 0.000 Intergenic Intergenic 226621 NM_194434 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding chr2-1619 chr2 19355260 19355504 + 13.2 0.000 intron (NM_145260, intron 1 of 2) intron (NM_145260, intron 1 of 2) 3241 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding chr22-603 chr22 50451585 50451829 + 13.2 0.000 intron (NM_001365819, intron 35 of 39) L1MEf|LINE|L1 23328 NM_001365819 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr10-750 chr10 97447920 97448164 + 13.2 0.000 intron (NR_109895, intron 1 of 8) intron (NR_109895, intron 1 of 8) 1867 NM_198046 84287 Hs.76662 NM_032327 ENSG00000171307 ZDHHC16 APH2|DHHC-16 zinc finger DHHC-type containing 16 protein-coding chr21-190 chr21 45982665 45982909 + 13.2 0.000 intron (NM_001848, intron 2 of 34) intron (NM_001848, intron 2 of 34) 1038 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr3-397 chr3 46300203 46300447 + 13.2 0.000 Intergenic Intergenic -53419 NM_001123041 729230 Hs.511794 NM_001123041 ENSG00000121807 CCR2 CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R C-C motif chemokine receptor 2 protein-coding chr7-598 chr7 129485456 129485700 + 13.2 0.000 intron (NM_020704, intron 20 of 20) intron (NM_020704, intron 20 of 20) -16953 NM_001195243 100287482 Hs.178144 NM_001195243 ENSG00000240204 SMKR1 - small lysine rich protein 1 protein-coding chr3-1055 chr3 171995139 171995383 + 13.2 0.000 Intergenic Intergenic -44317 NM_022763 64778 Hs.744888 NM_022763 ENSG00000075420 FNDC3B FAD104|PRO4979|YVTM2421 fibronectin type III domain containing 3B protein-coding chr14-345 chr14 102593064 102593308 + 13.2 0.000 exon (NM_015156, exon 1 of 12) exon (NM_015156, exon 1 of 12) 537 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding chr11-860 chr11 10161211 10161455 + 13.2 0.000 intron (NM_030962, intron 2 of 39) intron (NM_030962, intron 2 of 39) 132874 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding chr17-1413 chr17 76618653 76618897 + 13.0 0.000 Intergenic AluSx1|SINE|Alu 24982 NM_001289107 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding chr22-515 chr22 42646166 42646410 + 13.0 0.000 intron (NM_000398, intron 1 of 8) intron (NM_000398, intron 1 of 8) 701 NM_001171661 1727 Hs.561064 NM_000398 ENSG00000100243 CYB5R3 B5R|DIA1 cytochrome b5 reductase 3 protein-coding chr19-1617 chr19 42853380 42853624 + 13.0 0.000 intron (NR_026824, intron 2 of 6) intron (NR_026824, intron 2 of 6) 2216 NR_026824 653492 Hs.655399 NM_176809 PSG10P PSG10|PSG12 pregnancy specific beta-1-glycoprotein 10, pseudogene pseudo chr5-975 chr5 2280978 2281222 + 13.0 0.000 Intergenic Intergenic 31101 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr15-616 chr15 37773194 37773438 + 13.0 0.000 Intergenic Intergenic -161291 NM_152453 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding chr1-2238 chr1 12275400 12275644 + 13.0 0.000 intron (NM_015378, intron 18 of 69) intron (NM_015378, intron 18 of 69) 45492 NM_018156 55187 Hs.439381 NM_015378 ENSG00000048707 VPS13D SCAR4 vacuolar protein sorting 13 homolog D protein-coding chr20-165 chr20 36574644 36574888 + 13.0 0.000 intron (NM_001199535, intron 1 of 4) CpG 212 NM_001199515 60436 Hs.632264 NM_021809 ENSG00000118707 TGIF2 - TGFB induced factor homeobox 2 protein-coding chr19-1370 chr19 39169441 39169685 + 13.0 0.000 exon (NM_001014831, exon 4 of 11) exon (NM_001014831, exon 4 of 11) -27401 NM_001001414 342897 Hs.726934 NM_001001414 ENSG00000188505 NCCRP1 FBXO50|NCCRP-1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) protein-coding chr6-871 chr6 157514898 157515142 + 13.0 0.000 intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) -14112 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA chr2-819 chr2 240783469 240783713 + 13.0 0.000 intron (NM_004321, intron 8 of 46) intron (NM_004321, intron 8 of 46) 36628 NM_001330289 547 Hs.516802 NM_004321 ENSG00000130294 KIF1A ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104 kinesin family member 1A protein-coding chr11-1242 chr11 134047584 134047828 + 13.0 0.000 Intergenic Intergenic 15434 NR_027276 100128239 Hs.423734 NR_027276 ENSG00000204241 LINC02731 - long intergenic non-protein coding RNA 2731 ncRNA chr7-538 chr7 158667594 158667838 + 13.0 0.000 intron (NM_001281932, intron 14 of 28) intron (NM_001281932, intron 14 of 28) 37088 NM_017760 54892 Hs.18616 NM_017760 ENSG00000146918 NCAPG2 3KS|CAP-G2|CAPG2|LUZP5|MTB|hCAP-G2 non-SMC condensin II complex subunit G2 protein-coding chr1-2221 chr1 9264206 9264450 + 13.0 0.000 exon (NM_004285, exon 5 of 5) exon (NM_004285, exon 5 of 5) 24481 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr3-544 chr3 184090287 184090531 + 13.0 0.000 Intergenic L1MC4|LINE|L1 -6655 NM_198313 285242 Hs.449179 NM_182589 ENSG00000186038 HTR3E 5-HT3-E|5-HT3E|5-HT3c1 5-hydroxytryptamine receptor 3E protein-coding chr6-960 chr6 37486422 37486666 + 13.0 0.000 intron (NM_138493, intron 1 of 3) intron (NM_138493, intron 1 of 3) 13349 NM_138493 154467 Hs.284207 NM_138493 ENSG00000198937 CCDC167 C6orf129|HSPC265 coiled-coil domain containing 167 protein-coding chr16-1243 chr16 89126677 89126921 + 13.0 0.000 intron (NR_104293, intron 7 of 10) L1MEf|LINE|L1 -9749 NR_045667 197322 Hs.461727 NM_174917 ENSG00000176715 ACSF3 - acyl-CoA synthetase family member 3 protein-coding chr9-298 chr9 83980105 83980349 + 13.0 0.000 promoter-TSS (NM_001318188) promoter-TSS (NM_001318188) -12 NM_031263 3190 Hs.522257 NM_002140 ENSG00000165119 HNRNPK AUKS|CSBP|HNRPK|TUNP heterogeneous nuclear ribonucleoprotein K protein-coding chr12-1210 chr12 107315972 107316216 + 13.0 0.000 Intergenic L1MA9|LINE|L1 -2340 NM_001347943 121551 Hs.271272 NM_152322 ENSG00000151136 BTBD11 ABTB2B BTB domain containing 11 protein-coding chr10-124 chr10 137953 138197 + 13.0 0.000 intron (NM_001370109, intron 1 of 13) intron (NM_001370109, intron 1 of 13) 2266 NM_001370109 10771 Hs.292265 NM_006624 ENSG00000015171 ZMYND11 BRAM1|BS69|MRD30 zinc finger MYND-type containing 11 protein-coding chr3-1048 chr3 162295413 162295657 + 13.0 0.000 Intergenic Intergenic 798727 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr11-1472 chr11 45894705 45894949 + 13.0 0.000 intron (NM_005456, intron 1 of 11) intron (NM_005456, intron 1 of 11) 9176 NM_005456 9479 Hs.234249 NM_005456 ENSG00000121653 MAPK8IP1 IB1|JIP-1|JIP1|PRKM8IP mitogen-activated protein kinase 8 interacting protein 1 protein-coding chr11-868 chr11 27699027 27699271 + 13.0 0.000 TTS (NR_033313) TTS (NR_033313) 518 NM_170734 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding chr11-1461 chr11 42738644 42738888 + 13.0 0.000 Intergenic L2a|LINE|L2 -485076 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA chr20-430 chr20 43505072 43505316 + 13.0 0.000 Intergenic LTR1A1|LTR|ERV1 -2503 NM_032107 26013 Hs.709356 NM_015478 ENSG00000185513 L3MBTL1 H-L(3)MBT|L3MBTL|ZC2HC3|dJ138B7.3 L3MBTL histone methyl-lysine binding protein 1 protein-coding chr16-502 chr16 1269237 1269481 + 13.0 0.000 Intergenic LTR106_Mam|LTR|LTR 13290 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr3-1492 chr3 187741654 187741898 + 13.0 0.000 intron (NM_001706, intron 1 of 9) intron (NM_001706, intron 1 of 9) 3692 NM_001706 604 Hs.478588 NM_001706 ENSG00000113916 BCL6 BCL5|BCL6A|LAZ3|ZBTB27|ZNF51 BCL6 transcription repressor protein-coding chr4-902 chr4 3226150 3226394 + 13.0 0.000 intron (NM_002111, intron 57 of 66) intron (NM_002111, intron 57 of 66) -18097 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr12-532 chr12 65778251 65778495 + 13.0 0.000 intron (NR_026825, intron 1 of 1) Zaphod|DNA|hAT-Tip100 -46087 NM_001300918 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding chr12-371 chr12 55848002 55848246 + 13.0 0.000 Intergenic Intergenic -5188 NM_001272101 4327 Hs.591033 NM_002429 ENSG00000123342 MMP19 CODA|MMP18|RASI-1 matrix metallopeptidase 19 protein-coding chr1-2524 chr1 156005400 156005644 + 13.0 0.000 Intergenic Intergenic 15429 NM_003145 6746 Hs.74564 NM_003145 ENSG00000163479 SSR2 HSD25|TLAP|TRAP-BETA|TRAPB signal sequence receptor subunit 2 protein-coding chr2-1723 chr2 69082549 69082793 + 13.0 0.000 intron (NM_032208, intron 8 of 17) intron (NM_032208, intron 8 of 17) -21011 NR_036073 100423030 NR_036073 ENSG00000266649 MIR3126 mir-3126 microRNA 3126 ncRNA chr20-577 chr20 33100152 33100396 + 13.0 0.000 intron (NM_182519, intron 11 of 15) intron (NM_182519, intron 11 of 15) 18762 NM_182519 149954 Hs.38961 NM_182519 ENSG00000186191 BPIFB4 C20orf186|LPLUNC4|RY2G5|dJ726C3.5 BPI fold containing family B member 4 protein-coding chr9-1236 chr9 84371838 84372082 + 13.0 0.000 Intergenic Intergenic -3233 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding chr10-1212 chr10 86366060 86366304 + 13.0 0.000 intron (NM_017551, intron 1 of 15) CpG-3093 613 NM_017551 2894 Hs.530653 NM_017551 ENSG00000182771 GRID1 GluD1 glutamate ionotropic receptor delta type subunit 1 protein-coding chr16-1122 chr16 55230955 55231199 + 13.0 0.000 Intergenic A-rich|Low_complexity|Low_complexity -93482 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr1-2596 chr1 201295938 201296182 + 13.0 0.000 intron (NM_001005337, intron 2 of 13) intron (NM_001005337, intron 2 of 13) 12554 NM_001005337 5317 Hs.497350 NM_000299 ENSG00000081277 PKP1 B6P plakophilin 1 protein-coding chr7-1436 chr7 140657006 140657250 + 13.0 0.000 Intergenic HERV3-int|LTR|ERV1 -15668 NM_001318053 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding chr11-1352 chr11 113259609 113259853 + 13.0 0.000 intron (NM_181351, intron 15 of 18) AluSz|SINE|Alu 14170 NR_034101 100288346 Hs.661826 NR_034101 ENSG00000227487 NCAM1-AS1 - NCAM1 antisense RNA1 ncRNA chr15-604 chr15 93073209 93073453 + 13.0 0.000 promoter-TSS (NM_001166286) promoter-TSS (NM_001166286) -175 NM_001166286 56963 Hs.271277 NM_020211 ENSG00000182175 RGMA RGM repulsive guidance molecule BMP co-receptor a protein-coding chr8-222 chr8 22565382 22565626 + 13.0 0.000 promoter-TSS (NM_001018003) promoter-TSS (NM_001018003) -225 NM_001018003 10174 Hs.528572 NM_005775 ENSG00000120896 SORBS3 SCAM-1|SCAM1|SH3D4 sorbin and SH3 domain containing 3 protein-coding chr1-2656 chr1 225731658 225731902 + 13.0 0.000 Intergenic L2c|LINE|L2 -46033 NM_001130440 6726 Hs.511425 NM_003133 ENSG00000143742 SRP9 ALURBP signal recognition particle 9 protein-coding chr4-816 chr4 55396794 55397038 + 13.0 0.000 intron (NM_018475, intron 1 of 5) intron (NM_018475, intron 1 of 5) 959 NR_073070 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding chr22-499 chr22 37979537 37979781 + 13.0 0.000 intron (NM_006941, intron 2 of 3) intron (NM_006941, intron 2 of 3) 4873 NM_006941 6663 Hs.376984 NM_006941 ENSG00000100146 SOX10 DOM|PCWH|WS2E|WS4|WS4C SRY-box transcription factor 10 protein-coding chr1-2004 chr1 23903993 23904237 + 13.0 0.000 intron (NM_001841, intron 1 of 1) intron (NM_001841, intron 1 of 1) 9247 NM_001841 1269 Hs.73037 NM_001841 ENSG00000188822 CNR2 CB-2|CB2|CX5 cannabinoid receptor 2 protein-coding chr5-1050 chr5 67004275 67004519 + 13.0 0.000 promoter-TSS (NM_001290227) promoter-TSS (NM_001290227) -243 NR_111908 101928794 Hs.672435 NR_111908 MAST4-AS1 - MAST4 antisense RNA 1 ncRNA chr10-972 chr10 9255101 9255345 + 13.0 0.000 intron (NR_120635, intron 4 of 4) AluY|SINE|Alu -20390 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA chr1-2696 chr1 246593149 246593393 + 13.0 0.000 intron (NM_152609, intron 2 of 10) intron (NM_152609, intron 2 of 10) 26815 NM_152609 163882 Hs.368353 NM_152609 ENSG00000162852 CNST C1orf71|PPP1R64 consortin, connexin sorting protein protein-coding chr7-1004 chr7 101218106 101218350 + 13.0 0.000 promoter-TSS (NM_006349) promoter-TSS (NM_006349) 63 NM_006349 10467 Hs.211079 NM_006349 ENSG00000106400 ZNHIT1 CG1I|ZNFN4A1 zinc finger HIT-type containing 1 protein-coding chr15-720 chr15 81000833 81001077 + 13.0 0.000 promoter-TSS (NM_022566) promoter-TSS (NM_022566) 32 NM_022566 59274 Hs.513071 NM_022566 ENSG00000140406 TLNRD1 MESDC1 talin rod domain containing 1 protein-coding chr8-587 chr8 141059262 141059506 + 13.0 0.000 Intergenic Intergenic -57305 NM_001352699 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding chr20-541 chr20 16188074 16188318 + 13.0 0.000 Intergenic Intergenic -202314 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr1-2340 chr1 36624885 36625129 + 13.0 0.000 Intergenic Intergenic -141693 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding chr15-88 chr15 28105631 28105875 + 13.0 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -6438 NM_000275 4948 Hs.654411 NM_000275 ENSG00000104044 OCA2 BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1 OCA2 melanosomal transmembrane protein protein-coding chr16-1074 chr16 13857486 13857730 + 13.0 0.000 Intergenic Intergenic -62549 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding chr2-1921 chr2 215402071 215402315 + 13.0 0.000 intron (NM_212482, intron 20 of 45) intron (NM_212482, intron 20 of 45) 33875 NM_001365518 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr22-570 chr22 29388224 29388468 + 13.0 0.000 intron (NM_001166019, intron 1 of 20) CpG 224 NM_001166019 162 Hs.368794 NM_001127 ENSG00000100280 AP1B1 ADTB1|AP105A|BAM22|CLAPB2 adaptor related protein complex 1 subunit beta 1 protein-coding chr10-1069 chr10 133269540 133269784 + 13.0 0.000 intron (NM_001164490, intron 15 of 19) intron (NM_001164490, intron 15 of 19) 7206 NM_001109 101 Hs.501574 NM_001109 ENSG00000151651 ADAM8 CD156|CD156a|MS2 ADAM metallopeptidase domain 8 protein-coding chr12-243 chr12 57772165 57772409 + 13.0 0.000 promoter-TSS (NM_023033) promoter-TSS (NM_023033) -182 NM_023033 4234 Hs.42957 NM_005371 ENSG00000037897 METTL1 C12orf1|TRM8|TRMT8|YDL201w methyltransferase like 1 protein-coding chr11-1314 chr11 65320844 65321088 + 13.0 0.000 exon (NM_006779, exon 2 of 2) exon (NM_006779, exon 2 of 2) 6100 NM_006779 10435 Hs.343380 NM_006779 ENSG00000149798 CDC42EP2 BORG1|CEP2 CDC42 effector protein 2 protein-coding chr2-1294 chr2 110678628 110678872 + 13.0 0.000 promoter-TSS (NM_004336) promoter-TSS (NM_004336) -643 NM_001278616 699 Hs.469649 NM_004336 ENSG00000169679 BUB1 BUB1A|BUB1L|hBUB1 BUB1 mitotic checkpoint serine/threonine kinase protein-coding chr3-1506 chr3 196209064 196209308 + 13.0 0.000 intron (NM_001039617, intron 3 of 7) intron (NM_001039617, intron 3 of 7) 2214 NM_001039617 131540 Hs.111591 NM_001039617 ENSG00000163958 ZDHHC19 DHHC19 zinc finger DHHC-type containing 19 protein-coding chr2-1226 chr2 42132806 42133050 + 13.0 0.000 Intergenic Intergenic -36425 NM_001145076 27436 Hs.713173 NM_019063 ENSG00000143924 EML4 C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120 EMAP like 4 protein-coding chr5-1161 chr5 159100401 159100645 + 13.0 0.000 promoter-TSS (NM_024007) promoter-TSS (NM_024007) 40 NR_109890 101927740 Hs.738721 NR_109890 ENSG00000245812 LINC02202 - long intergenic non-protein coding RNA 2202 ncRNA chr11-1411 chr11 6298680 6298924 + 13.0 0.000 Intergenic Intergenic 21699 NM_145040 112464 Hs.434044 NM_145040 ENSG00000170955 CAVIN3 HSRBC|PRKCDBP|SRBC|cavin-3 caveolae associated protein 3 protein-coding chr12-1206 chr12 106303237 106303481 + 13.0 0.000 intron (NM_152772, intron 1 of 9) CpG 626 NM_152772 255394 Hs.696047 NM_152772 ENSG00000166046 TCP11L2 - t-complex 11 like 2 protein-coding chr12-1228 chr12 113149541 113149785 + 13.0 0.000 promoter-TSS (NM_001144872) promoter-TSS (NM_001144872) -195 NM_001144872 387885 Hs.486856 NM_001144872 ENSG00000186710 CFAP73 CCDC42B|MIA2 cilia and flagella associated protein 73 protein-coding chr16-1012 chr16 695524 695768 + 13.0 0.000 exon (NM_153350, exon 3 of 6) exon (NM_153350, exon 3 of 6) -5248 NM_032259 84219 Hs.459632 NM_032259 ENSG00000127580 WDR24 C16orf21|JFP7 WD repeat domain 24 protein-coding chr12-1024 chr12 551216 551460 + 13.0 0.000 intron (NM_173593, intron 11 of 19) intron (NM_173593, intron 11 of 19) 35148 NR_134624 105369595 Hs.504422 NR_134624 LOC105369595 - uncharacterized LOC105369595 ncRNA chr19-877 chr19 18954218 18954462 + 13.0 0.000 Intergenic (CATC)n|Simple_repeat|Simple_repeat -13123 NM_004838 9454 Hs.720208 NM_004838 ENSG00000051128 HOMER3 HOMER-3|VESL3 homer scaffold protein 3 protein-coding chr18-298 chr18 9536355 9536599 + 13.0 0.000 3' UTR (NM_006788, exon 10 of 10) 3' UTR (NM_006788, exon 10 of 10) 60964 NM_006788 10928 Hs.528993 NM_006788 ENSG00000017797 RALBP1 RIP1|RLIP1|RLIP76 ralA binding protein 1 protein-coding chr1-2537 chr1 160820655 160820899 + 13.0 0.000 intron (NM_001261456, intron 7 of 9) intron (NM_001261456, intron 7 of 9) 24603 NM_001261456 4063 Hs.403857 NM_002348 ENSG00000122224 LY9 CD229|SLAMF3|hly9|mLY9 lymphocyte antigen 9 protein-coding chr19-601 chr19 45868453 45868697 + 13.0 0.000 intron (NM_004497, intron 1 of 1) AluSx|SINE|Alu 4249 NM_004497 3171 Hs.36137 NM_004497 ENSG00000170608 FOXA3 FKHH3|HNF3G|TCF3G forkhead box A3 protein-coding chr1-1668 chr1 18923908 18924152 + 13.0 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) -21231 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chrX-411 chrX 3788544 3788788 + 13.0 0.000 Intergenic Intergenic 55228 NR_034031 389906 Hs.636199 NM_001045547 LOC389906 - zinc finger protein 839 pseudogene pseudo chr6-686 chr6 46684262 46684506 + 13.0 0.000 intron (NR_144468, intron 1 of 3) (TG)n|Simple_repeat|Simple_repeat 3449 NR_134644 101926934 Hs.664979 NR_134642 ENSG00000242973 LOC101926934 - uncharacterized LOC101926934 ncRNA chrX-363 chrX 21764186 21764430 + 13.0 0.000 Intergenic Intergenic -6192 NM_014332 23676 Hs.86492 NM_014332 ENSG00000091482 SMPX DFN6|DFNX4 small muscle protein X-linked protein-coding chr10-825 chr10 44016968 44017212 + 13.0 0.000 Intergenic Intergenic 104688 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA chr4-160 chr4 914874 915118 + 13.0 0.000 intron (NM_005255, intron 1 of 27) CpG 17320 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr20-680 chr20 64033895 64034139 + 13.0 0.000 TTS (NM_012469) TTS (NM_012469) 290 NM_001348090 284739 Hs.97840 NM_207349 ENSG00000196421 C20orf204 LINC00176|NCRNA00176|PRR17 chromosome 20 open reading frame 204 protein-coding chr8-999 chr8 143434457 143434701 + 13.0 0.000 Intergenic Intergenic -3847 NM_201589 389692 NM_201589 ENSG00000182759 MAFA INSDM|RIPE3b1|hMafA MAF bZIP transcription factor A protein-coding chr7-655 chr7 108962701 108962945 + 13.0 0.000 Intergenic AluSx3|SINE|Alu -78236 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr19-956 chr19 16234207 16234451 + 13.0 0.000 intron (NM_032493, intron 11 of 11) intron (NM_032493, intron 11 of 11) 36418 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr6-1030 chr6 89411949 89412193 + 13.0 0.000 5' UTR (NM_021244, exon 1 of 7) 5' UTR (NM_021244, exon 1 of 7) 202 NM_021244 58528 Hs.31712 NM_021244 ENSG00000025039 RRAGD RAGD|bA11D8.2.1 Ras related GTP binding D protein-coding chr19-1589 chr19 35806804 35807048 + 13.0 0.000 intron (NM_021232, intron 6 of 10) intron (NM_021232, intron 6 of 10) 6373 NM_021232 58510 Hs.515366 NM_021232 ENSG00000250799 PRODH2 HSPOX1|HYPDH proline dehydrogenase 2 protein-coding chr2-1822 chr2 130228517 130228761 + 13.0 0.000 Intergenic CpG -30200 NM_207312 112714 Hs.433336 NM_207312 ENSG00000152086 TUBA3E - tubulin alpha 3e protein-coding chr16-962 chr16 74774579 74774823 + 13.0 0.000 exon (NM_024306, exon 1 of 7) exon (NM_024306, exon 1 of 7) 119 NM_024306 79152 Hs.461329 NM_024306 ENSG00000103089 FA2H FAAH|FAH1|FAXDC1|SCS7|SPG35 fatty acid 2-hydroxylase protein-coding chr18-235 chr18 38675130 38675374 + 13.0 0.000 Intergenic L1MC3|LINE|L1 946923 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-411 chr8 113762211 113762455 + 13.0 0.000 Intergenic L1PA13|LINE|L1 -325394 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding chr18-167 chr18 79245629 79245873 + 13.0 0.000 intron (NR_148360, intron 11 of 31) intron (NR_148360, intron 11 of 31) -150179 NM_001278670 4772 Hs.534074 NM_006162 ENSG00000131196 NFATC1 NF-ATC|NF-ATc1.2|NFAT2|NFATc nuclear factor of activated T cells 1 protein-coding chrX-205 chrX 65034710 65034954 + 13.0 0.000 promoter-TSS (NM_001178032) promoter-TSS (NM_001178032) -91 NM_001178032 55906 Hs.28249 NM_018684 ENSG00000126970 ZC4H2 HCA127|KIAA1166|MRXS4|WRWF|WWS zinc finger C4H2-type containing protein-coding chr3-1483 chr3 184160559 184160803 + 13.0 0.000 intron (NM_004423, intron 1 of 14) intron (NM_004423, intron 1 of 14) 5304 NM_004423 1857 Hs.388116 NM_004423 ENSG00000161202 DVL3 DRS3 dishevelled segment polarity protein 3 protein-coding chr1-1924 chr1 223298751 223298995 + 13.0 0.000 intron (NM_017982, intron 2 of 8) intron (NM_017982, intron 2 of 8) 65303 NM_001037175 55061 Hs.497841 NM_017982 ENSG00000143502 SUSD4 PRO222 sushi domain containing 4 protein-coding chr2-1729 chr2 73053748 73053992 + 13.0 0.000 intron (NM_001330406, intron 2 of 14) intron (NM_001330406, intron 2 of 14) 5302 NM_001330406 94097 Hs.368171 NM_144579 ENSG00000144040 SFXN5 BBG-TCC|SLC56A5 sideroflexin 5 protein-coding chr4-536 chr4 101200639 101200883 + 13.0 0.000 intron (NM_001130691, intron 1 of 12) MIR3|SINE|MIR 40111 NR_107033 102465868 NR_107033 ENSG00000273882 MIR8066 hsa-mir-8066 microRNA 8066 ncRNA chr2-1506 chr2 120534013 120534257 + 13.0 0.000 Intergenic Intergenic -67786 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA chr9-1408 chr9 136296833 136297077 + 13.0 0.000 intron (NR_111982, intron 4 of 9) intron (NR_111982, intron 4 of 9) 7139 NR_111982 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr7-1194 chr7 2157309 2157553 + 13.0 0.000 intron (NM_001013837, intron 10 of 18) intron (NM_001013837, intron 10 of 18) -68379 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA chr1-941 chr1 85201486 85201730 + 13.0 0.000 promoter-TSS (NM_032184) promoter-TSS (NM_032184) -592 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding chr20-618 chr20 48403016 48403260 + 13.0 0.000 Intergenic L3|LINE|CR1 43227 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA chr10-1071 chr10 133437837 133438081 + 13.0 0.000 Intergenic LTR13|LTR|ERVK -13342 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr18-303 chr18 11149643 11149887 + 13.0 0.000 Intergenic CpG-12359 -1003 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding chr12-672 chr12 87136372 87136616 + 13.0 0.000 Intergenic Intergenic -194245 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA chr17-1480 chr17 82842350 82842594 + 13.0 0.000 intron (NM_005993, intron 13 of 38) intron (NM_005993, intron 13 of 38) -2450 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr12-1269 chr12 124567793 124568037 + 13.0 0.000 promoter-TSS (NM_001206654) promoter-TSS (NM_001206654) -303 NM_001077261 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr3-975 chr3 59760433 59760677 + 13.0 0.000 intron (NM_001354590, intron 7 of 8) intron (NM_001354590, intron 7 of 8) -102058 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr17-903 chr17 82613948 82614192 + 13.0 0.000 TTS (NM_019613) TTS (NM_019613) 34374 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr4-799 chr4 7974414 7974658 + 13.0 0.000 intron (NM_001130084, intron 19 of 19) (TCCA)n|Simple_repeat|Simple_repeat 30845 NR_029511 407052 NR_029511 ENSG00000207807 MIR95 MIRN95|hsa-mir-95|miR-95 microRNA 95 ncRNA chr6-226 chr6 44223867 44224111 + 13.0 0.000 intron (NM_001078177, intron 1 of 13) CpG 394 NM_001078175 2030 Hs.25450 NM_004955 ENSG00000112759 SLC29A1 ENT1 solute carrier family 29 member 1 (Augustine blood group) protein-coding chr1-1091 chr1 194321381 194321625 + 13.0 0.000 Intergenic Intergenic 1016758 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA chr9-707 chr9 128787055 128787299 + 13.0 0.000 promoter-TSS (NM_018201) promoter-TSS (NM_018201) -30 NM_001286772 54662 Hs.3376 NM_018201 ENSG00000107021 TBC1D13 - TBC1 domain family member 13 protein-coding chr20-457 chr20 63315118 63315362 + 13.0 0.000 intron (NM_020882, intron 19 of 35) intron (NM_020882, intron 19 of 35) 22054 NM_020882 57642 Hs.271285 NM_020882 ENSG00000101203 COL20A1 - collagen type XX alpha 1 chain protein-coding chr9-1225 chr9 78031106 78031350 + 13.0 0.000 exon (NM_002072, exon 1 of 7) exon (NM_002072, exon 1 of 7) 583 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr1-723 chr1 155209076 155209320 + 12.9 0.000 exon (NM_198883, exon 1 of 7) exon (NM_198883, exon 1 of 7) 499 NM_198883 4580 Hs.490874 NM_002455 ENSG00000173171 MTX1 MTX|MTXN metaxin 1 protein-coding chr7-494 chr7 151341880 151342124 + 12.9 0.000 intron (NM_001363529, intron 1 of 14) CpG 190 NM_001363529 51667 Hs.647082 NM_016118 ENSG00000013374 NUB1 BS4|NUB1L|NYREN18 negative regulator of ubiquitin like proteins 1 protein-coding chr20-616 chr20 46911090 46911334 + 12.9 0.000 intron (NM_172110, intron 1 of 13) MER20|DNA|hAT-Charlie 16369 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding chr1-1739 chr1 40477238 40477482 + 12.9 0.000 promoter-TSS (NM_001320179) promoter-TSS (NM_001320179) 70 NM_001320179 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding chr19-864 chr19 12156690 12156934 + 12.9 0.000 promoter-TSS (NM_145233) promoter-TSS (NM_145233) -78 NR_037801 90589 Hs.732736 NM_145233 ENSG00000257591 ZNF625 - zinc finger protein 625 protein-coding chr8-353 chr8 102123272 102123516 + 12.9 0.000 intron (NM_001040624, intron 1 of 7) intron (NM_001040624, intron 1 of 7) 940 NM_001040627 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr2-1785 chr2 105708498 105708742 + 12.9 0.000 Intergenic Intergenic -36292 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr14-790 chr14 102438153 102438397 + 12.9 0.000 intron (NM_014844, intron 10 of 19) intron (NM_014844, intron 10 of 19) 71501 NM_001348651 122416 Hs.432945 NM_152326 ENSG00000156381 ANKRD9 - ankyrin repeat domain 9 protein-coding chr19-628 chr19 18295235 18295479 + 12.9 0.000 Intergenic (TCCA)n|Simple_repeat|Simple_repeat 13280 NR_036155 100422833 NR_036155 ENSG00000267959 MIR3188 mir-3188 microRNA 3188 ncRNA chr16-822 chr16 56608357 56608601 + 12.9 0.000 promoter-TSS (NM_005953) promoter-TSS (NM_005953) -105 NM_005953 4502 Hs.534330 NM_005953 ENSG00000125148 MT2A MT-2|MT-II|MT2 metallothionein 2A protein-coding chr2-1697 chr2 47783941 47784185 + 12.9 0.000 5' UTR (NM_001281494, exon 1 of 10) 5' UTR (NM_001281494, exon 1 of 10) 108 NM_001281494 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr6-965 chr6 38863176 38863420 + 12.9 0.000 intron (NM_001371, intron 43 of 91) AluSg|SINE|Alu 89809 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA chr1-2217 chr1 9039256 9039500 + 12.9 0.000 TTS (NM_001135585) TTS (NM_001135585) -13033 NM_207420 155184 Hs.531239 NM_207420 ENSG00000197241 SLC2A7 GLUT-7|GLUT7 solute carrier family 2 member 7 protein-coding chr12-546 chr12 120085858 120086102 + 12.9 0.000 intron (NM_001367886, intron 8 of 9) intron (NM_001367886, intron 8 of 9) 30773 NM_006861 11021 Hs.524788 NM_006861 ENSG00000111737 RAB35 H-ray|RAB1C|RAY RAB35, member RAS oncogene family protein-coding chr2-1260 chr2 72943094 72943338 + 12.9 0.000 non-coding (NR_138476, exon 15 of 15) non-coding (NR_138476, exon 15 of 15) 25697 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding chr19-1442 chr19 2316689 2316933 + 12.9 0.000 Intergenic Intergenic -8657 NM_001101391 645191 NM_001101391 ENSG00000220008 LINGO3 LERN2|LRRN6B leucine rich repeat and Ig domain containing 3 protein-coding chr1-2490 chr1 119472544 119472788 + 12.9 0.000 Intergenic HUERS-P2-int|LTR|ERV1 -34537 NM_001328615 3283 Hs.364941 NM_000862 ENSG00000203857 HSD3B1 3BETAHSD|HSD3B|HSDB3|HSDB3A|SDR11E1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 protein-coding chr10-1330 chr10 129109556 129109800 + 12.9 0.000 Intergenic Intergenic 196845 NR_148990 728327 Hs.454452 NR_148990 ENSG00000224190 LINC02667 - long intergenic non-protein coding RNA 2667 ncRNA chr2-1563 chr2 222300928 222301172 + 12.9 0.000 intron (NR_161172, intron 1 of 1) intron (NR_161172, intron 1 of 1) -2052 NM_013942 5077 Hs.42146 NM_000438 ENSG00000135903 PAX3 CDHS|HUP2|WS1|WS3 paired box 3 protein-coding chr19-1130 chr19 623168 623412 + 12.9 0.000 intron (NM_005035, intron 6 of 20) CpG-12898 10247 NM_005035 5442 Hs.254113 NM_005035 ENSG00000099821 POLRMT APOLMT|MTRNAP|MTRPOL|h-mtRPOL RNA polymerase mitochondrial protein-coding chr20-548 chr20 20594506 20594750 + 12.9 0.000 intron (NM_020343, intron 16 of 39) intron (NM_020343, intron 16 of 39) 118016 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding chr16-911 chr16 1120485 1120729 + 12.9 0.000 Intergenic Intergenic -24363 NM_207419 390664 Hs.527853 NM_207419 ENSG00000184471 C1QTNF8 CTRP8|UNQ5829 C1q and TNF related 8 protein-coding chr7-1433 chr7 140114630 140114874 + 12.9 0.000 intron (NM_030647, intron 9 of 19) SVA_D|Retroposon|SVA -51031 NM_022750 64761 Hs.12646 NM_022750 ENSG00000059378 PARP12 ARTD12|MST109|MSTP109|ZC3H1|ZC3HDC1 poly(ADP-ribose) polymerase family member 12 protein-coding chr11-887 chr11 47400948 47401192 + 12.9 0.000 promoter-TSS (NR_039707) promoter-TSS (NR_039707) 100 NR_039707 100616222 NR_039707 ENSG00000264583 MIR4487 mir-4487 microRNA 4487 ncRNA chr1-2590 chr1 196339369 196339613 + 12.9 0.000 intron (NM_001287820, intron 15 of 26) intron (NM_001287820, intron 15 of 26) 242990 NR_039888 100616363 NR_039888 ENSG00000265986 MIR4735 - microRNA 4735 ncRNA chr10-1200 chr10 79006363 79006607 + 12.9 0.000 intron (NR_015429, intron 3 of 7) intron (NR_015429, intron 3 of 7) 60963 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA chr21-220 chr21 15549844 15550088 + 12.9 0.000 Intergenic MLT1D|LTR|ERVL-MaLR -179968 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding chr2-1354 chr2 196799620 196799864 + 12.9 0.000 promoter-TSS (NM_001206774) promoter-TSS (NM_001206774) -59 NM_012086 9330 Hs.470996 NM_012086 ENSG00000119041 GTF3C3 TFIIIC102|TFIIICgamma|TFiiiC2-102 general transcription factor IIIC subunit 3 protein-coding chr13-431 chr13 26475743 26475987 + 12.9 0.000 Intergenic L2a|LINE|L2 -81818 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding chr3-1477 chr3 182604797 182605041 + 12.9 0.000 Intergenic AluSg4|SINE|Alu -97795 NR_134941 105374244 Hs.130176 NR_134941 ENSG00000244247 LINC01995 - long intergenic non-protein coding RNA 1995 ncRNA chr18-299 chr18 9803150 9803394 + 12.9 0.000 intron (NM_006868, intron 3 of 6) AluJo|SINE|Alu -82701 NM_032243 84203 Hs.98712 NM_032243 ENSG00000168454 TXNDC2 SPTRX|SPTRX1 thioredoxin domain containing 2 protein-coding chr7-901 chr7 4790396 4790640 + 12.9 0.000 exon (NM_014855, exon 15 of 17) exon (NM_014855, exon 15 of 17) -1879 NR_039800 100616465 NR_039800 ENSG00000264474 MIR4656 - microRNA 4656 ncRNA chr11-1481 chr11 46560545 46560789 + 12.9 0.000 intron (NM_001267782, intron 1 of 19) intron (NM_001267782, intron 1 of 19) 26777 NR_160027 55626 Hs.654644 NM_017749 ENSG00000110497 AMBRA1 DCAF3|WDR94 autophagy and beclin 1 regulator 1 protein-coding chr7-1028 chr7 131106171 131106415 + 12.9 0.000 intron (NR_109850, intron 2 of 5) CpG 737 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr14-613 chr14 37013140 37013384 + 12.9 0.000 intron (NM_001171170, intron 1 of 10) AmnSINE1|SINE|5S-Deu-L2 -60871 NR_039725 100616280 NR_039725 ENSG00000266327 MIR4503 - microRNA 4503 ncRNA chr18-257 chr18 76518569 76518813 + 12.9 0.000 Intergenic Intergenic -9964 NR_015417 284276 Hs.390287 NR_015417 ENSG00000266256 LINC00908 - long intergenic non-protein coding RNA 908 ncRNA chr2-1712 chr2 61813889 61814133 + 12.9 0.000 Intergenic Intergenic 40049 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr10-950 chr10 129967609 129967853 + 12.9 0.000 Intergenic CpG-3521 -3457 NM_001005463 253738 Hs.591374 NM_001005463 ENSG00000108001 EBF3 COE3|EBF-3|HADDS|O/E-2|OE-2 EBF transcription factor 3 protein-coding chr19-899 chr19 56538855 56539099 + 12.9 0.000 promoter-TSS (NM_020828) promoter-TSS (NM_020828) 29 NM_020828 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding chr2-880 chr2 231190352 231190596 + 12.9 0.000 Intergenic Intergenic -8157 NM_001271466 80210 Hs.162411 NM_025139 ENSG00000135931 ARMC9 ARM|JBTS30|KU-MEL-1|NS21 armadillo repeat containing 9 protein-coding chr7-539 chr7 457605 457849 + 12.9 0.000 Intergenic Intergenic 62117 NM_033023 5154 Hs.535898 NM_002607 ENSG00000197461 PDGFA PDGF-A|PDGF1 platelet derived growth factor subunit A protein-coding chr5-1065 chr5 93677314 93677558 + 12.9 0.000 intron (NM_032042, intron 10 of 10) intron (NM_032042, intron 10 of 10) -56648 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA chr22-565 chr22 24969875 24970119 + 12.9 0.000 Intergenic Intergenic -23302 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding chr4-376 chr4 101647179 101647423 + 12.9 0.000 Intergenic Intergenic -143306 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding chr19-1267 chr19 45638940 45639184 + 12.9 0.000 promoter-TSS (NR_029886) promoter-TSS (NR_029886) 25 NR_029886 442902 NR_029886 ENSG00000284544 MIR330 MIRN330|hsa-mir-330|mir-330 microRNA 330 ncRNA chr10-905 chr10 102399430 102399674 + 12.9 0.000 intron (NM_001077494, intron 13 of 22) CpG 3847 NM_001322934 4791 Hs.73090 NM_002502 ENSG00000077150 NFKB2 CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 nuclear factor kappa B subunit 2 protein-coding chr10-1252 chr10 100825944 100826188 + 12.9 0.000 intron (NM_003988, intron 9 of 10) intron (NM_003988, intron 9 of 10) 80355 NM_003987 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding chr4-373 chr4 86904351 86904595 + 12.9 0.000 Intergenic AluSc|SINE|Alu -12051 NM_001369889 132989 Hs.339646 NM_144645 ENSG00000163633 C4orf36 - chromosome 4 open reading frame 36 protein-coding chr20-494 chr20 40897308 40897552 + 12.9 0.000 Intergenic Intergenic -83283 NR_145525 100128988 Hs.636443 NR_145524 LOC100128988 - uncharacterized LOC100128988 ncRNA chr6-873 chr6 157833652 157833896 + 12.9 0.000 intron (NM_016224, intron 1 of 17) intron (NM_016224, intron 1 of 17) 10528 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr7-1090 chr7 41886227 41886471 + 12.9 0.000 Intergenic Intergenic -183259 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr9-340 chr9 128922730 128922974 + 12.9 0.000 intron (NM_001100877, intron 1 of 9) intron (NM_001100877, intron 1 of 9) 569 NM_001100877 254295 Hs.709447 NM_174933 ENSG00000175287 PHYHD1 - phytanoyl-CoA dioxygenase domain containing 1 protein-coding chr8-857 chr8 41669304 41669548 + 12.9 0.000 intron (NM_020475, intron 38 of 41) AluJo|SINE|Alu -4152 NM_020478 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr1-2064 chr1 146009721 146009965 + 12.9 0.000 Intergenic AluJo|SINE|Alu 11892 NM_001316767 148738 Hs.632436 NM_145277 ENSG00000168509 HJV HFE2|HFE2A|JH|RGMC hemojuvelin BMP co-receptor protein-coding chrX-430 chrX 24581471 24581715 + 12.9 0.000 intron (NM_004845, intron 5 of 7) L2c|LINE|L2 65754 NM_004845 9468 Hs.660708 NM_004845 ENSG00000102230 PCYT1B CCTB|CTB phosphate cytidylyltransferase 1, choline, beta protein-coding chr10-875 chr10 85833353 85833597 + 12.9 0.000 intron (NM_017551, intron 8 of 15) L1MD2|LINE|L1 255744 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA chr2-1987 chr2 238434418 238434662 + 12.9 0.000 intron (NM_001330196, intron 2 of 3) intron (NM_001330196, intron 2 of 3) 7613 NM_001330196 51665 Hs.516788 NM_016114 ENSG00000065802 ASB1 ASB-1 ankyrin repeat and SOCS box containing 1 protein-coding chr19-1112 chr19 48297863 48298107 + 12.9 0.000 intron (NM_144577, intron 12 of 13) intron (NM_144577, intron 12 of 13) 21514 NM_144577 93233 Hs.112645 NM_144577 ENSG00000105479 CCDC114 CILD20 coiled-coil domain containing 114 protein-coding chr16-1024 chr16 1177255 1177499 + 12.9 0.000 intron (NM_001005407, intron 2 of 33) CpG 24136 NM_001005407 8912 Hs.459642 NM_021098 ENSG00000196557 CACNA1H CACNA1HB|Cav3.2|ECA6|EIG6|HALD4 calcium voltage-gated channel subunit alpha1 H protein-coding chr4-494 chr4 2061405 2061649 + 12.9 0.000 intron (NM_178557, intron 2 of 2) intron (NM_178557, intron 2 of 2) 2200 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr19-1305 chr19 373614 373858 + 12.9 0.000 intron (NM_199202, intron 2 of 6) intron (NM_199202, intron 2 of 6) 2290 NM_016585 51298 Hs.250002 NM_016585 ENSG00000105549 THEG CT56|THEG1 theg spermatid protein protein-coding chr19-1220 chr19 18928187 18928431 + 12.9 0.000 TTS (NM_001145722) TTS (NM_001145722) 8594 NR_033677 54555 Hs.143187 NM_019070 ENSG00000105671 DDX49 Dbp8|R27090_2 DEAD-box helicase 49 protein-coding chr10-771 chr10 133458340 133458584 + 12.9 0.000 non-coding (NR_149718, exon 4 of 13) non-coding (NR_149718, exon 4 of 13) 4534 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo chr3-1449 chr3 157174659 157174903 + 12.9 0.000 Intergenic CpG -14021 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr6-935 chr6 27472950 27473194 + 12.9 0.000 promoter-TSS (NR_144687) promoter-TSS (NR_144687) 33 NM_001318893 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding chr12-877 chr12 96240664 96240908 + 12.9 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -14712 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr11-566 chr11 61917464 61917708 + 12.9 0.000 promoter-TSS (NM_013401) promoter-TSS (NM_013401) -20 NM_013401 5866 Hs.13759 NM_013401 ENSG00000167994 RAB3IL1 GRAB RAB3A interacting protein like 1 protein-coding chr8-468 chr8 17312517 17312761 + 12.9 0.000 intron (NM_004686, intron 8 of 13) L2a|LINE|L2 65681 NM_001363169 137492 Hs.343873 NM_152415 ENSG00000155975 VPS37A HCRP1|PQBP2|SPG53 VPS37A subunit of ESCRT-I protein-coding chr19-1461 chr19 3985428 3985672 + 12.9 0.000 promoter-TSS (NM_001961) promoter-TSS (NM_001961) -87 NM_001961 1938 Hs.515070 NM_001961 ENSG00000167658 EEF2 EEF-2|EF-2|EF2|SCA26 eukaryotic translation elongation factor 2 protein-coding chr1-2679 chr1 235972360 235972604 + 12.9 0.000 Intergenic MLT1E3|LTR|ERVL-MaLR -88769 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr7-1407 chr7 128923801 128924045 + 12.7 0.000 Intergenic AluJb|SINE|Alu -13109 NM_001347928 3663 Hs.521181 NM_032643 ENSG00000128604 IRF5 SLEB10 interferon regulatory factor 5 protein-coding chr1-1173 chr1 68323383 68323627 + 12.7 0.000 Intergenic Intergenic -90959 NM_001193334 79971 Hs.647659 NM_024911 ENSG00000116729 WLS C1orf139|EVI|GPR177|MRP|mig-14 Wnt ligand secretion mediator protein-coding chr2-1969 chr2 232875461 232875705 + 12.7 0.000 promoter-TSS (NR_144371) promoter-TSS (NR_144371) -27 NR_144371 389084 Hs.657509 NM_206895 ENSG00000182600 SNORC ASCL830|C2orf82|UNQ830 secondary ossification center associated regulator of chondrocyte maturation protein-coding chr10-979 chr10 20220634 20220878 + 12.7 0.000 intron (NM_032812, intron 12 of 13) L2a|LINE|L2 -331214 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA chr12-960 chr12 49950928 49951172 + 12.7 0.000 TTS (NR_110591) TTS (NR_110591) 309 NM_000486 359 Hs.130730 NM_000486 ENSG00000167580 AQP2 AQP-CD|WCH-CD aquaporin 2 protein-coding chr5-1175 chr5 172416059 172416303 + 12.7 0.000 intron (NM_001017995, intron 2 of 12) AluJr|SINE|Alu 38342 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding chr21-185 chr21 44318554 44318798 + 12.7 0.000 intron (NM_001002021, intron 13 of 24) intron (NM_001002021, intron 13 of 24) 18623 NM_001002021 5211 Hs.255093 NM_002626 ENSG00000141959 PFKL ATP-PFK|PFK-B|PFK-L phosphofructokinase, liver type protein-coding chr22-297 chr22 50456961 50457205 + 12.7 0.000 exon (NM_002972, exon 29 of 41) exon (NM_002972, exon 29 of 41) 17952 NM_001365819 6305 Hs.589924 NM_002972 ENSG00000100241 SBF1 CMT4B3|DENND7A|MTMR5 SET binding factor 1 protein-coding chr10-301 chr10 113679686 113679930 + 12.7 0.000 promoter-TSS (NM_033339) promoter-TSS (NM_033339) -104 NM_001227 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding KI270519.1-2 KI270519.1 137854 138074 + 12.7 0.000 NA NA NA NA chr7-1053 chr7 151136965 151137209 + 12.7 0.000 intron (NM_001281300, intron 11 of 15) L2b|LINE|L2 22449 NM_001308305 116988 Hs.647075 NM_031946 ENSG00000133612 AGAP3 AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 protein-coding chr7-1202 chr7 2689850 2690094 + 12.7 0.000 intron (NM_001321766, intron 1 of 6) intron (NM_001321766, intron 1 of 6) 1770 NM_001321766 155185 Hs.42221 NM_133463 ENSG00000174945 AMZ1 - archaelysin family metallopeptidase 1 protein-coding chr21-191 chr21 46033913 46034157 + 12.7 0.000 Intergenic Intergenic 52286 NM_001848 1291 Hs.474053 NM_001848 ENSG00000142156 COL6A1 BTHLM1|OPLL|UCHMD1 collagen type VI alpha 1 chain protein-coding chr16-1104 chr16 31140283 31140527 + 12.7 0.000 exon (NM_173502, exon 14 of 15) exon (NM_173502, exon 14 of 15) -4678 NM_002773 5652 Hs.75799 NM_002773 ENSG00000052344 PRSS8 CAP1|PROSTASIN serine protease 8 protein-coding chr3-656 chr3 50084216 50084460 + 12.7 0.000 Intergenic SVA_D|Retroposon|SVA -4581 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr5-790 chr5 135567032 135567276 + 12.7 0.000 Intergenic L2b|LINE|L2 -12011 NM_001349335 153328 Hs.412418 NM_145282 ENSG00000145832 SLC25A48 - solute carrier family 25 member 48 protein-coding chr15-416 chr15 40927589 40927833 + 12.7 0.000 Intergenic CpG -1629 NM_019074 54567 Hs.511076 NM_019074 ENSG00000128917 DLL4 AOS6|delta4|hdelta2 delta like canonical Notch ligand 4 protein-coding chr17-1140 chr17 44043345 44043589 + 12.7 0.000 intron (NM_001369486, intron 1 of 3) intron (NM_001369486, intron 1 of 3) -20316 NM_001304813 84336 Hs.514211 NM_032376 ENSG00000091947 TMEM101 - transmembrane protein 101 protein-coding chr7-1123 chr7 78028838 78029082 + 12.7 0.000 intron (NM_001301128, intron 20 of 20) MIR|SINE|MIR 188830 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr20-394 chr20 327160 327404 + 12.7 0.000 3' UTR (NM_006943, exon 1 of 1) 3' UTR (NM_006943, exon 1 of 1) 1711 NM_006943 6666 Hs.43627 NM_006943 ENSG00000177732 SOX12 SOX22 SRY-box transcription factor 12 protein-coding chrX-429 chrX 24465044 24465288 + 12.7 0.000 promoter-TSS (NM_005391) promoter-TSS (NM_005391) -61 NM_005391 5165 Hs.296031 NM_005391 ENSG00000067992 PDK3 CMTX6|GS1-358P8.4 pyruvate dehydrogenase kinase 3 protein-coding chr1-2024 chr1 38301004 38301248 + 12.7 0.000 Intergenic Intergenic -86359 NR_038928 339442 Hs.434245 NR_038928 ENSG00000237290 LINC01343 - long intergenic non-protein coding RNA 1343 ncRNA chr2-1279 chr2 95329378 95329622 + 12.7 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) -17158 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr14-672 chr14 103473921 103474165 + 12.7 0.000 intron (NM_001128920, intron 12 of 15) AluSc8|SINE|Alu 48787 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr4-549 chr4 133130361 133130605 + 12.7 0.000 intron (NR_125885, intron 7 of 8) HAL1|LINE|L1 18633 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA chr21-180 chr21 42756989 42757233 + 12.7 0.000 intron (NM_001001574, intron 8 of 17) intron (NM_001001574, intron 8 of 17) 22883 NR_135517 101928311 Hs.570404 NR_135517 ENSG00000283051 LINC01668 - long intergenic non-protein coding RNA 1668 ncRNA chr17-1033 chr17 74930689 74930933 + 12.7 0.000 exon (NM_178160, exon 6 of 7) exon (NM_178160, exon 6 of 7) -4991 NM_178233 347741 Hs.454407 NM_178233 ENSG00000182938 OTOP3 - otopetrin 3 protein-coding chr20-677 chr20 63858714 63858958 + 12.7 0.000 Intergenic Intergenic -2377 NM_080622 140701 Hs.266774 NM_080622 ENSG00000183260 ABHD16B C20orf135|dJ591C20.1 abhydrolase domain containing 16B protein-coding chr14-692 chr14 36009313 36009557 + 12.7 0.000 Intergenic Intergenic -60992 NR_073454 101101773 Hs.640678 NR_073454 ENSG00000257585 LINC00609 - long intergenic non-protein coding RNA 609 ncRNA chr19-1430 chr19 1585038 1585282 + 12.7 0.000 exon (NM_001281453, exon 2 of 7) exon (NM_001281453, exon 2 of 7) 7705 NM_001281453 53615 Hs.178728 NM_003926 ENSG00000071655 MBD3 - methyl-CpG binding domain protein 3 protein-coding chr2-1335 chr2 172995763 172996007 + 12.7 0.000 intron (NM_001282901, intron 9 of 24) intron (NM_001282901, intron 9 of 24) 67680 NM_001282901 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding chr12-1246 chr12 120799410 120799654 + 12.7 0.000 intron (NM_139015, intron 2 of 10) L4_A_Mam|LINE|RTE-X 73706 NM_000017 35 Hs.507076 NM_000017 ENSG00000122971 ACADS ACAD3|SCAD acyl-CoA dehydrogenase short chain protein-coding chr18-282 chr18 57976159 57976403 + 12.7 0.000 Intergenic Intergenic -67945 NM_015277 23327 Hs.185677 NM_015277 ENSG00000049759 NEDD4L NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2 NEDD4 like E3 ubiquitin protein ligase protein-coding chr13-433 chr13 29847696 29847940 + 12.7 0.000 intron (NM_007106, intron 1 of 4) intron (NM_007106, intron 1 of 4) 2799 NM_007106 5412 Hs.145575 NM_007106 ENSG00000122042 UBL3 HCG-1|PNSC1 ubiquitin like 3 protein-coding chr5-741 chr5 52469456 52469700 + 12.7 0.000 Intergenic Intergenic -318338 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr12-774 chr12 121793402 121793646 + 12.7 0.000 exon (NM_019034, exon 1 of 5) exon (NM_019034, exon 1 of 5) 164 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr15-484 chr15 61598382 61598626 + 12.7 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -131414 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA chr13-544 chr13 114290623 114290867 + 12.7 0.000 intron (NR_148488, intron 3 of 5) AluSp|SINE|Alu 8350 NM_001353648 65110 Hs.533855 NM_023011 ENSG00000169062 UPF3A HUPF3A|RENT3A|UPF3 UPF3A regulator of nonsense mediated mRNA decay protein-coding chr14-299 chr14 75147686 75147930 + 12.7 0.000 intron (NM_006827, intron 2 of 4) (ACCC)n|Simple_repeat|Simple_repeat -20760 NM_001329238 91754 Hs.7200 NM_033116 ENSG00000119638 NEK9 APUG|LCCS10|NC|NERCC|NERCC1 NIMA related kinase 9 protein-coding chr16-522 chr16 34085148 34085392 + 12.7 0.000 Intergenic Intergenic -78308 NR_162093 113218496 NR_162093 MIR9901 - microRNA 9901 ncRNA chr8-140 chr8 144094807 144095051 + 12.7 0.000 promoter-TSS (NM_001916) promoter-TSS (NM_001916) -147 NM_001916 1537 Hs.289271 NM_001916 ENSG00000179091 CYC1 MC3DN6|UQCR4 cytochrome c1 protein-coding chr2-834 chr2 39524384 39524628 + 12.7 0.000 intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) 87090 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA chr11-1630 chr11 102324026 102324270 + 12.7 0.000 5' UTR (NM_001165, exon 2 of 9) 5' UTR (NM_001165, exon 2 of 9) 6664 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding chr2-1967 chr2 232449475 232449719 + 12.7 0.000 Intergenic Intergenic -6556 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr17-1298 chr17 39402370 39402614 + 12.7 0.000 promoter-TSS (NM_032875) promoter-TSS (NM_032875) 64 NM_001370209 84961 Hs.462946 NM_032875 ENSG00000108306 FBXL20 Fbl2|Fbl20 F-box and leucine rich repeat protein 20 protein-coding chr1-2282 chr1 21490837 21491081 + 12.7 0.000 Intergenic LTR28C|LTR|ERV1 -18025 NM_001369805 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr5-746 chr5 56089328 56089572 + 12.7 0.000 Intergenic Intergenic 94283 NR_102755 441072 Hs.482141 NR_102755 ENSG00000227908 FLJ31104 - uncharacterized LOC441072 ncRNA chr6-847 chr6 123401818 123402062 + 12.7 0.000 intron (NM_001251987, intron 12 of 20) AluSx|SINE|Alu -37664 NR_110844 101927990 Hs.660877 NR_110844 TRDN-AS1 HRAT13 TRDN antisense RNA 1 ncRNA chr14-598 chr14 104788732 104788976 + 12.7 0.000 intron (NM_001014431, intron 2 of 13) intron (NM_001014431, intron 2 of 13) 4747 NM_005163 207 Hs.525622 NM_005163 ENSG00000142208 AKT1 AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA AKT serine/threonine kinase 1 protein-coding chr2-1881 chr2 184366783 184367027 + 12.7 0.000 Intergenic AluJo|SINE|Alu -12070 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA chr6-650 chr6 6919872 6920116 + 12.7 0.000 Intergenic Intergenic -187749 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr8-708 chr8 143225923 143226167 + 12.7 0.000 Intergenic Intergenic 12827 NM_178172 338328 Hs.426410 NM_178172 ENSG00000277494 GPIHBP1 GPI-HBP1|HYPL1D glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 protein-coding chr16-842 chr16 67431265 67431509 + 12.7 0.000 exon (NM_000196, exon 1 of 5) exon (NM_000196, exon 1 of 5) 266 NM_000196 3291 Hs.1376 NM_000196 ENSG00000176387 HSD11B2 AME|AME1|HSD11K|HSD2|SDR9C3 hydroxysteroid 11-beta dehydrogenase 2 protein-coding chr11-616 chr11 65181935 65182179 + 12.7 0.000 promoter-TSS (NR_145677) promoter-TSS (NR_145677) 129 NR_040008 823 Hs.502842 NM_005186 ENSG00000014216 CAPN1 CANP|CANP1|CANPL1|SPG76|muCANP|muCL calpain 1 protein-coding chr1-1821 chr1 116951009 116951253 + 12.7 0.000 intron (NM_020440, intron 4 of 8) intron (NM_020440, intron 4 of 8) 41215 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding chr1-2453 chr1 95117335 95117579 + 12.7 0.000 promoter-TSS (NM_001199691) promoter-TSS (NM_001199691) 102 NM_152487 148534 Hs.483512 NM_152487 ENSG00000152078 TLCD4 TMEM56 TLC domain containing 4 protein-coding chr10-1184 chr10 71744366 71744610 + 12.7 0.000 intron (NM_022124, intron 36 of 67) intron (NM_022124, intron 36 of 67) -6638 NM_001168390 414152 Hs.568788 NM_001164375 ENSG00000214688 C10orf105 - chromosome 10 open reading frame 105 protein-coding chr2-974 chr2 105772788 105773032 + 12.7 0.000 intron (NM_003581, intron 1 of 4) AluJr|SINE|Alu 27847 NM_001004722 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding chr22-627 chr22 23180438 23180682 + 12.7 0.000 promoter-TSS (NM_021574) promoter-TSS (NM_021574) 51 NM_021574 613 Hs.517461 NM_004327 ENSG00000186716 BCR ALL|BCR1|CML|D22S11|D22S662|PHL BCR activator of RhoGEF and GTPase protein-coding chr12-906 chr12 121756883 121757127 + 12.7 0.000 intron (NM_001080825, intron 5 of 11) intron (NM_001080825, intron 5 of 11) 36683 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr3-1106 chr3 28156389 28156633 + 12.7 0.000 Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -85108 NM_001331185 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding chr17-541 chr17 5062540 5062784 + 12.7 0.000 Intergenic Intergenic -15805 NM_153018 124961 Hs.48832 NM_153018 ENSG00000180787 ZFP3 ZNF752 ZFP3 zinc finger protein protein-coding chr2-1670 chr2 37776012 37776256 + 12.7 0.000 Intergenic Intergenic 53577 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA chr4-1061 chr4 125607089 125607333 + 12.7 0.000 Intergenic Intergenic 99952 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA chr16-276 chr16 3011021 3011265 + 12.7 0.000 Intergenic AluSx1|SINE|Alu -1780 NM_020982 9080 Hs.296949 NM_020982 ENSG00000213937 CLDN9 - claudin 9 protein-coding chr13-436 chr13 30813757 30814001 + 12.7 0.000 Intergenic L1MC2|LINE|L1 10673 NR_047012 100874158 Hs.577982 NR_047012 ENSG00000237879 LINC00398 - long intergenic non-protein coding RNA 398 ncRNA chr12-744 chr12 49074669 49074913 + 12.7 0.000 Intergenic AluJr4|SINE|Alu -4812 NM_144593 121268 Hs.159013 NM_144593 ENSG00000167550 RHEBL1 RHEBL1c RHEB like 1 protein-coding chr9-670 chr9 94792820 94793064 + 12.7 0.000 intron (NM_001193331, intron 4 of 7) intron (NM_001193331, intron 4 of 7) -17020 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr1-2187 chr1 3152915 3153159 + 12.7 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 25062 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr19-1122 chr19 55174005 55174249 + 12.7 0.000 intron (NM_001297774, intron 6 of 6) intron (NM_001297774, intron 6 of 6) 5221 NM_001297774 6861 Hs.631566 NM_003180 ENSG00000129990 SYT5 - synaptotagmin 5 protein-coding chr20-615 chr20 46684356 46684600 + 12.7 0.000 promoter-TSS (NM_001011554) promoter-TSS (NM_001011554) 7 NM_001193340 64849 Hs.655498 NM_022829 ENSG00000158296 SLC13A3 ARLIAK|NADC3|SDCT2 solute carrier family 13 member 3 protein-coding chr19-1391 chr19 48881038 48881282 + 12.7 0.000 intron (NM_003323, intron 12 of 12) intron (NM_003323, intron 12 of 12) 8768 NM_014330 23645 Hs.631593 NM_014330 ENSG00000087074 PPP1R15A GADD34 protein phosphatase 1 regulatory subunit 15A protein-coding chr16-772 chr16 1256440 1256684 + 12.7 0.000 exon (NM_012217, exon 2 of 5) exon (NM_012217, exon 2 of 5) 493 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr8-866 chr8 47270218 47270462 + 12.7 0.000 intron (NM_001352942, intron 1 of 17) L1MB7|LINE|L1 9402 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding chr7-835 chr7 45390789 45391033 + 12.7 0.000 Intergenic Intergenic -183229 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding chr1-2248 chr1 15782703 15782947 + 12.7 0.000 intron (NM_001024216, intron 6 of 6) AluSx1|SINE|Alu 18326 NM_001024215 54751 Hs.530101 NM_017556 ENSG00000162458 FBLIM1 CAL|FBLP-1|FBLP1 filamin binding LIM protein 1 protein-coding chr10-409 chr10 65157461 65157705 + 12.7 0.000 Intergenic AluSg7|SINE|Alu -233065 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA chr11-1591 chr11 73940188 73940432 + 12.7 0.000 Intergenic HERVK14-int|LTR|ERVK -10009 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr10-1059 chr10 126548545 126548789 + 12.7 0.000 intron (NM_001350922, intron 2 of 8) intron (NM_001350922, intron 2 of 8) -27174 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding chr17-1452 chr17 81315637 81315881 + 12.7 0.000 Intergenic Intergenic -6511 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr7-1308 chr7 67205383 67205627 + 12.7 0.000 intron (NR_134540, intron 14 of 14) L1MDa|LINE|L1 -91108 NR_039793 100616310 NR_039793 ENSG00000266525 MIR4650-1 - microRNA 4650-1 ncRNA chr7-621 chr7 23600301 23600545 + 12.7 0.000 intron (NM_138771, intron 2 of 3) intron (NM_138771, intron 2 of 3) 3041 NM_138771 90693 Hs.232296 NM_138771 ENSG00000169193 CCDC126 - coiled-coil domain containing 126 protein-coding chr10-908 chr10 102729257 102729501 + 12.7 0.000 exon (NM_001350989, exon 6 of 13) exon (NM_001350989, exon 6 of 13) -14569 NM_001083913 54838 Hs.500897 NM_017787 ENSG00000166272 WBP1L C10orf26|OPA1L|OPAL1 WW domain binding protein 1 like protein-coding chr20-362 chr20 4450302 4450546 + 12.5 0.000 Intergenic Intergenic -201137 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr10-1217 chr10 87093097 87093341 + 12.5 0.000 intron (NM_001318905, intron 1 of 15) intron (NM_001318905, intron 1 of 15) 868 NM_001318900 2746 Hs.500409 NM_005271 ENSG00000148672 GLUD1 GDH|GDH1|GLUD glutamate dehydrogenase 1 protein-coding chr8-680 chr8 121743102 121743346 + 12.5 0.000 Intergenic Intergenic -101784 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding chr17-766 chr17 35726753 35726997 + 12.5 0.000 TTS (NM_001282) TTS (NM_001282) -4764 NM_033315 91608 Hs.744994 NM_033315 ENSG00000270885 RASL10B RRP17|VTS58635 RAS like family 10 member B protein-coding chr7-1156 chr7 139825754 139825998 + 12.5 0.000 intron (NM_001166254, intron 3 of 14) MER103C|DNA|hAT-Charlie -3388 NM_001366538 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr6-626 chr6 142301499 142301743 + 12.5 0.000 promoter-TSS (NM_001032395) promoter-TSS (NM_001032395) -298 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding chr12-453 chr12 123670960 123671204 + 12.5 0.000 promoter-TSS (NM_024809) promoter-TSS (NM_024809) -31 NM_024809 79867 Hs.167165 NM_024809 ENSG00000168778 TCTN2 C12orf38|JBTS24|MKS8|TECT2 tectonic family member 2 protein-coding chr17-948 chr17 27456366 27456610 + 12.5 0.000 promoter-TSS (NM_001367810) promoter-TSS (NM_001367810) 40 NM_001367810 8844 Hs.133534 NM_014238 ENSG00000141068 KSR1 KSR|RSU2 kinase suppressor of ras 1 protein-coding chr18-240 chr18 48106796 48107040 + 12.5 0.000 intron (NM_001371291, intron 4 of 6) intron (NM_001371291, intron 4 of 6) 30230 NM_001039360 201501 Hs.515388 NM_001039360 ENSG00000184828 ZBTB7C APM-1|APM1|ZBTB36|ZNF857C zinc finger and BTB domain containing 7C protein-coding chr20-664 chr20 63485198 63485442 + 12.5 0.000 Intergenic Intergenic -12665 NM_172108 3785 Hs.161851 NM_004518 ENSG00000075043 KCNQ2 BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2 potassium voltage-gated channel subfamily Q member 2 protein-coding chr15-647 chr15 52252709 52252953 + 12.5 0.000 intron (NM_018728, intron 12 of 40) intron (NM_018728, intron 12 of 40) 24369 NR_031670 100302202 NR_031670 ENSG00000221052 MIR1266 MIRN1266|hsa-mir-1266|mir-1266 microRNA 1266 ncRNA chr10-811 chr10 31620756 31621000 + 12.5 0.000 Intergenic L2|LINE|L2 -221123 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding chr2-1979 chr2 237482980 237483224 + 12.5 0.000 Intergenic Intergenic -3308 NM_001281474 79083 Hs.102406 NM_024101 ENSG00000115648 MLPH SLAC2-A melanophilin protein-coding chr2-1841 chr2 149331093 149331337 + 12.5 0.000 promoter-TSS (NR_162091) promoter-TSS (NR_162091) 628 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding chr7-1149 chr7 116892587 116892831 + 12.5 0.000 intron (NM_006136, intron 2 of 9) MER30|DNA|hAT-Charlie 30122 NM_006136 830 Hs.446123 NM_006136 ENSG00000198898 CAPZA2 CAPPA2|CAPZ capping actin protein of muscle Z-line subunit alpha 2 protein-coding chr2-1934 chr2 219296684 219296928 + 12.5 0.000 exon (NM_002846, exon 16 of 23) exon (NM_002846, exon 16 of 23) -2606 NR_029688 406944 NR_029688 ENSG00000207647 MIR153-1 MIRN153-1|mir-153-1 microRNA 153-1 ncRNA chr10-1052 chr10 123007396 123007640 + 12.5 0.000 intron (NR_073476, intron 1 of 4) intron (NR_073476, intron 1 of 4) 1169 NM_001271840 64376 Hs.501289 NM_001271840 ENSG00000095574 IKZF5 PEGASUS|ZNFN1A5 IKAROS family zinc finger 5 protein-coding chr15-555 chr15 46667968 46668212 + 12.5 0.000 Intergenic MIR|SINE|MIR -515999 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr1-2365 chr1 44390149 44390393 + 12.5 0.000 Intergenic L2|LINE|L2 -14889 NM_001319956 55182 Hs.456557 NM_018150 ENSG00000187147 RNF220 C1orf164 ring finger protein 220 protein-coding chr19-1242 chr19 39438765 39439009 + 12.5 0.000 Intergenic AluSz|SINE|Alu -2938 NM_001363860 6217 Hs.397609 NM_001020 ENSG00000105193 RPS16 S16 ribosomal protein S16 protein-coding chr1-1673 chr1 19596916 19597160 + 12.5 0.000 promoter-TSS (NR_135054) promoter-TSS (NR_135054) 59 NM_001204088 100532736 Hs.654502 NM_001204088 ENSG00000158747 MICOS10-NBL1 C1orf151-NBL1|DAN|DAND1|MINOS1-NBL1|NBL1 MICOS10-NBL1 readthrough protein-coding chr14-297 chr14 72906385 72906629 + 12.5 0.000 Intergenic Intergenic -12391 NM_001280543 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr19-1577 chr19 33350563 33350807 + 12.5 0.000 Intergenic Intergenic -23024 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding chr11-1145 chr11 65699609 65699853 + 12.5 0.000 Intergenic AluSx|SINE|Alu -12521 NM_001206833 10524 Hs.397010 NM_006388 ENSG00000172977 KAT5 ESA1|HTATIP|HTATIP1|PLIP|TIP|TIP60|ZC2HC5|cPLA2 lysine acetyltransferase 5 protein-coding chr20-450 chr20 57394327 57394571 + 12.5 0.000 intron (NM_017495, intron 3 of 3) intron (NM_017495, intron 3 of 3) -1393 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA chr13-385 chr13 44576146 44576390 + 12.5 0.000 promoter-TSS (NM_183422) promoter-TSS (NM_183422) 62 NM_183422 8848 Hs.436383 NM_006022 ENSG00000102804 TSC22D1 Ptg-2|TGFB1I4|TSC22 TSC22 domain family member 1 protein-coding chr3-732 chr3 51671798 51672042 + 12.5 0.000 intron (NR_103462, intron 1 of 3) CpG 293 NR_103463 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chr1-1632 chr1 3519448 3519692 + 12.5 0.000 intron (NM_001409, intron 5 of 36) CpG 41220 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chr7-916 chr7 18459735 18459979 + 12.5 0.000 intron (NM_001204144, intron 3 of 12) intron (NM_001204144, intron 3 of 12) -35853 NM_001204146 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding chr7-675 chr7 1430838 1431082 + 12.5 0.000 Intergenic AluJr|SINE|Alu 28510 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding chr17-621 chr17 42669869 42670113 + 12.5 0.000 exon (NM_024927, exon 11 of 13) exon (NM_024927, exon 11 of 13) 6020 NR_073574 79990 Hs.632251 NM_024927 ENSG00000068137 PLEKHH3 - pleckstrin homology, MyTH4 and FERM domain containing H3 protein-coding chr1-1989 chr1 11041909 11042153 + 12.5 0.000 intron (NM_006610, intron 6 of 10) (GGAT)n|Simple_repeat|Simple_repeat 5208 NM_006610 10747 Hs.655645 NM_006610 ENSG00000009724 MASP2 MAP19|MASP-2|MASP1P1|sMAP mannan binding lectin serine peptidase 2 protein-coding chr20-509 chr20 62216696 62216940 + 12.5 0.000 exon (NM_007232, exon 3 of 3) exon (NM_007232, exon 3 of 3) 3460 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr9-1293 chr9 114047740 114047984 + 12.5 0.000 intron (NM_001318042, intron 13 of 14) intron (NM_001318042, intron 13 of 14) 30438 NM_001633 259 Hs.436911 NM_001633 ENSG00000106927 AMBP A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI alpha-1-microglobulin/bikunin precursor protein-coding chr13-443 chr13 33679362 33679606 + 12.5 0.000 Intergenic Intergenic -2690 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding chr12-1053 chr12 12891318 12891562 + 12.5 0.000 5' UTR (NM_003979, exon 1 of 4) 5' UTR (NM_003979, exon 1 of 4) 418 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr9-887 chr9 63823542 63823786 + 12.5 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat -4010 NR_039688 100616184 NR_039688 ENSG00000276029 MIR4477A - microRNA 4477a ncRNA chr11-1293 chr11 60842761 60843005 + 12.5 0.000 intron (NM_024098, intron 1 of 3) intron (NM_024098, intron 1 of 3) 770 NM_024098 79080 Hs.4253 NM_024098 ENSG00000110104 CCDC86 - coiled-coil domain containing 86 protein-coding chr9-1158 chr9 138117258 138117502 + 12.5 0.000 intron (NM_001243812, intron 41 of 45) intron (NM_001243812, intron 41 of 45) -32733 NR_027156 643224 Hs.551805 NR_027156 TUBBP5 - tubulin beta pseudogene 5 pseudo chr18-137 chr18 24014614 24014858 + 12.5 0.000 promoter-TSS (NM_001243425) promoter-TSS (NM_001243425) -18 NM_001243425 125488 Hs.128576 NM_153211 ENSG00000168234 TTC39C C18orf17|HsT2697 tetratricopeptide repeat domain 39C protein-coding chr4-669 chr4 7739751 7739995 + 12.5 0.000 intron (NM_020777, intron 26 of 26) intron (NM_020777, intron 26 of 26) -14217 NR_026892 84740 Hs.663029 NM_032654 ENSG00000272620 AFAP1-AS1 AFAP1-AS|AFAP1AS AFAP1 antisense RNA 1 ncRNA chr19-1125 chr19 55368779 55369023 + 12.5 0.000 exon (NM_000641, exon 2 of 5) exon (NM_000641, exon 2 of 5) 1562 NM_000641 3589 Hs.467304 NM_000641 ENSG00000095752 IL11 AGIF|IL-11 interleukin 11 protein-coding chr13-527 chr13 110307554 110307798 + 12.5 0.000 promoter-TSS (NM_001303110) promoter-TSS (NM_001303110) 392 NM_001846 1284 Hs.508716 NM_001846 ENSG00000134871 COL4A2 BSVD2|ICH|POREN2 collagen type IV alpha 2 chain protein-coding chr2-1494 chr2 97732644 97732888 + 12.5 0.000 intron (NM_001079, intron 4 of 13) intron (NM_001079, intron 4 of 13) -1640 NM_207519 7535 Hs.234569 NM_001079 ENSG00000115085 ZAP70 ADMIO2|IMD48|SRK|STCD|STD|TZK|ZAP-70 zeta chain of T cell receptor associated protein kinase 70 protein-coding chr1-1099 chr1 204452655 204452899 + 12.5 0.000 intron (NM_002646, intron 13 of 33) AluJr|SINE|Alu 37569 NM_002646 5287 Hs.497487 NM_002646 ENSG00000133056 PIK3C2B C2-PI3K phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta protein-coding chr17-1012 chr17 59619792 59620036 + 12.5 0.000 promoter-TSS (NM_004859) promoter-TSS (NM_004859) 19 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding chr16-646 chr16 30928486 30928730 + 12.5 0.000 exon (NM_001099784, exon 6 of 11) exon (NM_001099784, exon 6 of 11) 4033 NM_001099784 54620 Hs.152149 NM_019085 ENSG00000099364 FBXL19 CXXC11|Fbl19|JHDM1C F-box and leucine rich repeat protein 19 protein-coding chr1-1485 chr1 11080309 11080553 + 12.5 0.000 intron (NM_002685, intron 13 of 23) intron (NM_002685, intron 13 of 23) -19244 NR_135062 105376736 Hs.634965 NR_135061 ENSG00000230337 EXOSC10-AS1 - EXOSC10 antisense RNA 1 ncRNA chr20-437 chr20 45890617 45890861 + 12.5 0.000 exon (NM_001278535, exon 1 of 2) exon (NM_001278535, exon 1 of 2) 548 NM_001278535 140825 Hs.517094 NM_080749 ENSG00000124257 NEURL2 C20orf163|OZZ|OZZ-E3 neuralized E3 ubiquitin protein ligase 2 protein-coding chr4-1011 chr4 84352586 84352830 + 12.5 0.000 Intergenic Intergenic -53539 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA chr16-805 chr16 25106951 25107195 + 12.5 0.000 intron (NR_120306, intron 1 of 2) CpG 4482 NR_120306 102723510 Hs.569596 NR_120306 LCMT1-AS1 - LCMT1 antisense RNA 1 ncRNA chr10-1350 chr10 133422949 133423193 + 12.5 0.000 TTS (NM_138384) TTS (NM_138384) 1546 NM_001012508 503542 Hs.64968 NM_001012508 ENSG00000203772 SPRN SHADOO|SHO|bA108K14.1 shadow of prion protein protein-coding chr1-2285 chr1 21599819 21600063 + 12.5 0.000 intron (NM_001350526, intron 24 of 28) MIR|SINE|MIR 48671 NM_001369803 249 Hs.75431 NM_000478 ENSG00000162551 ALPL AP-TNAP|APTNAP|HOPS|TNALP|TNAP|TNSALP alkaline phosphatase, biomineralization associated protein-coding chr6-1071 chr6 132131771 132132015 + 12.5 0.000 Intergenic UCON78|DNA|DNA -2085 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA chr5-1025 chr5 51383173 51383417 + 12.5 0.000 promoter-TSS (NM_002202) promoter-TSS (NM_002202) 37 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA chr17-1011 chr17 59565944 59566188 + 12.5 0.000 intron (NM_024612, intron 1 of 17) intron (NM_024612, intron 1 of 17) 456 NM_001166301 79665 Hs.29403 NM_024612 ENSG00000108406 DHX40 ARG147|DDX40|PAD DEAH-box helicase 40 protein-coding chr14-654 chr14 84034607 84034851 + 12.5 0.000 Intergenic FLAM_A|SINE|Alu -1237203 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr9-855 chr9 16795133 16795377 + 12.5 0.000 intron (NM_017637, intron 1 of 6) intron (NM_017637, intron 1 of 6) 68441 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA chr9-595 chr9 69035944 69036188 + 12.5 0.000 intron (NM_000144, intron 1 of 4) CpG 314 NM_000144 2395 Hs.20685 NM_000144 ENSG00000165060 FXN CyaY|FA|FARR|FRDA|X25 frataxin protein-coding chr4-462 chr4 75848244 75848488 + 12.5 0.000 Intergenic Intergenic 54086 NM_006239 5470 Hs.290873 NM_006239 ENSG00000156194 PPEF2 PPP7CB protein phosphatase with EF-hand domain 2 protein-coding chr18-246 chr18 55079923 55080167 + 12.5 0.000 Intergenic Intergenic 44261 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr1-1319 chr1 37807608 37807852 + 12.5 0.000 promoter-TSS (NM_001142726) promoter-TSS (NM_001142726) -60 NM_198446 127687 Hs.532749 NM_198446 ENSG00000197982 C1orf122 ALAESM chromosome 1 open reading frame 122 protein-coding chr9-1163 chr9 3980956 3981200 + 12.5 0.000 intron (NM_001042413, intron 4 of 10) intron (NM_001042413, intron 4 of 10) 82432 NR_026663 84850 Hs.676113 NM_032764 ENSG00000237009 GLIS3-AS1 C9orf70 GLIS3 antisense RNA 1 ncRNA chr1-2642 chr1 218487773 218488017 + 12.5 0.000 intron (NR_031644, intron 2 of 6) intron (NR_031644, intron 2 of 6) -22200 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA chr14-715 chr14 59378089 59378333 + 12.5 0.000 Intergenic Intergenic 87169 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding chr2-1706 chr2 55922920 55923164 + 12.5 0.000 intron (NM_001039348, intron 1 of 11) intron (NM_001039348, intron 1 of 11) 740 NM_001039348 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr21-264 chr21 44997498 44997742 + 12.5 0.000 Intergenic Intergenic -3534 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr22-632 chr22 24859676 24859920 + 12.5 0.000 exon (NM_001039948, exon 9 of 26) exon (NM_001039948, exon 9 of 26) 53577 NM_133454 129049 Hs.474397 NM_133454 ENSG00000167037 SGSM1 RUTBC2 small G protein signaling modulator 1 protein-coding chr10-607 chr10 133334610 133334854 + 12.5 0.000 intron (NM_001321617, intron 1 of 5) CpG 2164 NM_001321617 50632 Hs.148680 NM_015722 ENSG00000130643 CALY DRD1IP|NSG3 calcyon neuron specific vesicular protein protein-coding chr12-1184 chr12 95991774 95992018 + 12.5 0.000 intron (NM_002108, intron 9 of 20) intron (NM_002108, intron 9 of 20) 4448 NM_002108 3034 Hs.190783 NM_002108 ENSG00000084110 HAL HIS|HSTD histidine ammonia-lyase protein-coding chr17-740 chr17 6555753 6555997 + 12.5 0.000 intron (NM_031220, intron 1 of 19) CpG 680 NM_001165966 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr17-1173 chr17 76841981 76842225 + 12.5 0.000 Intergenic Intergenic -14063 NR_135283 283994 Hs.645372 NR_135283 ENSG00000267535 LINC00868 C17orf52 long intergenic non-protein coding RNA 868 ncRNA chr1-1613 chr1 1317306 1317550 + 12.5 0.000 intron (NM_001256463, intron 2 of 14) L1MEg|LINE|L1 -4862 NR_106785 102465435 NR_106785 ENSG00000283712 MIR6727 hsa-mir-6727 microRNA 6727 ncRNA chr9-1281 chr9 108862638 108862882 + 12.5 0.000 exon (NM_006687, exon 1 of 1) exon (NM_006687, exon 1 of 1) 494 NM_006687 10881 Hs.123530 NM_006687 ENSG00000187003 ACTL7A - actin like 7A protein-coding chr2-1614 chr2 11618462 11618706 + 12.5 0.000 exon (NM_014668, exon 22 of 33) exon (NM_014668, exon 22 of 33) 51611 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr1-2229 chr1 9974269 9974513 + 12.5 0.000 intron (NM_001297778, intron 2 of 4) AluY|SINE|Alu 7010 NR_049882 100847055 NR_049882 ENSG00000265521 MIR5697 - microRNA 5697 ncRNA chr20-588 chr20 36365624 36365868 + 12.5 0.000 intron (NM_001365621, intron 1 of 12) intron (NM_001365621, intron 1 of 12) 59407 NM_014902 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr3-660 chr3 56682969 56683213 + 12.5 0.000 5' UTR (NM_001365637, exon 1 of 24) 5' UTR (NM_001365637, exon 1 of 24) 146 NM_001363940 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding chr20-524 chr20 3795769 3796013 + 12.5 0.000 5' UTR (NM_021872, exon 1 of 15) 5' UTR (NM_021872, exon 1 of 15) 152 NM_021873 994 Hs.153752 NM_004358 ENSG00000101224 CDC25B - cell division cycle 25B protein-coding chr7-863 chr7 139527117 139527361 + 12.5 0.000 intron (NM_001353368, intron 1 of 3) intron (NM_001353368, intron 1 of 3) 3554 NM_001353368 154790 Hs.57806 NM_001080511 ENSG00000236279 CLEC2L - C-type lectin domain family 2 member L protein-coding chr2-1195 chr2 11669869 11670113 + 12.5 0.000 exon (NM_012344, exon 1 of 4) exon (NM_012344, exon 1 of 4) 204 NM_012344 23620 Hs.131138 NM_012344 ENSG00000169006 NTSR2 NTR2 neurotensin receptor 2 protein-coding chr12-1115 chr12 53118166 53118410 + 12.5 0.000 intron (NM_003578, intron 7 of 14) (CCCCCA)n|Simple_repeat|Simple_repeat 14802 NM_003578 8435 Hs.656544 NM_003578 ENSG00000167780 SOAT2 ACACT2|ACAT2|ARGP2 sterol O-acyltransferase 2 protein-coding chr7-1287 chr7 46486950 46487194 + 12.5 0.000 Intergenic MER5A|DNA|hAT-Charlie 210050 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA chr17-1149 chr17 49436348 49436592 + 12.5 0.000 Intergenic L2c|LINE|L2 -21565 NM_001281715 5245 Hs.514303 NM_002634 ENSG00000167085 PHB HEL-215|HEL-S-54e|PHB1 prohibitin protein-coding chr5-848 chr5 177134430 177134674 + 12.5 0.000 intron (NM_001365684, intron 1 of 23) CpG-22851 323 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding chr1-1581 chr1 205591951 205592195 + 12.5 0.000 intron (NM_181644, intron 6 of 9) CpG -22768 NR_027086 284578 Hs.537020 NR_027086 MFSD4A-AS1 - MFSD4A antisense RNA 1 ncRNA chr3-1379 chr3 112643095 112643339 + 12.5 0.000 Intergenic Intergenic -2074 NM_199512 151887 Hs.477128 NM_199511 ENSG00000091986 CCDC80 CL2|DRO1|SSG1|URB|okuribin coiled-coil domain containing 80 protein-coding chr13-448 chr13 36919497 36919741 + 12.5 0.000 intron (NM_001127217, intron 1 of 6) intron (NM_001127217, intron 1 of 6) 619 NM_005905 4093 Hs.123119 NM_005905 ENSG00000120693 SMAD9 MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B SMAD family member 9 protein-coding chr11-1323 chr11 66577555 66577799 + 12.5 0.000 Intergenic FLAM_A|SINE|Alu -9071 NM_003793 8722 Hs.11590 NM_003793 ENSG00000174080 CTSF CATSF|CLN13 cathepsin F protein-coding chr1-1983 chr1 8295574 8295818 + 12.5 0.000 Intergenic AluSq|SINE|Alu -22389 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr22-462 chr22 46379729 46379973 + 12.4 0.000 intron (NM_014246, intron 22 of 34) intron (NM_014246, intron 22 of 34) 44137 NM_001282783 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding chr19-1290 chr19 51098603 51098847 + 12.4 0.000 exon (NM_145232, exon 3 of 3) exon (NM_145232, exon 3 of 3) 9684 NM_145232 90353 Hs.148425 NM_145232 ENSG00000142544 CTU1 ATPBD3|NCS6 cytosolic thiouridylase subunit 1 protein-coding chr10-1155 chr10 50623109 50623353 + 12.4 0.000 intron (NM_147156, intron 1 of 10) CpG 725 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding chr8-930 chr8 101155444 101155688 + 12.4 0.000 Intergenic Intergenic 50107 NM_016096 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding chr8-694 chr8 140166894 140167138 + 12.4 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -66481 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr1-1552 chr1 151547101 151547345 + 12.4 0.000 intron (NM_001126337, intron 1 of 11) intron (NM_001126337, intron 1 of 11) 1427 NR_030280 693139 NR_030280 ENSG00000207606 MIR554 MIRN554|hsa-mir-554 microRNA 554 ncRNA chr21-210 chr21 39660627 39660871 + 12.4 0.000 exon (NM_001278650, exon 3 of 3) exon (NM_001278650, exon 3 of 3) 3416 NM_033172 10317 Hs.733638 NM_006057 ENSG00000183778 B3GALT5 B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5 beta-1,3-galactosyltransferase 5 protein-coding chr17-579 chr17 798853 799097 + 12.4 0.000 TTS (NM_022463) TTS (NM_022463) 16622 NM_001317947 55178 Hs.182729 NM_018146 ENSG00000171861 MRM3 RMTL1|RNMTL1 mitochondrial rRNA methyltransferase 3 protein-coding chr11-797 chr11 64870594 64870838 + 12.4 0.000 intron (NM_006795, intron 2 of 4) intron (NM_006795, intron 2 of 4) 7893 NR_162101 113218486 NR_162101 MIR10392 - microRNA 10392 ncRNA chr16-511 chr16 19707656 19707900 + 12.4 0.000 intron (NM_001348534, intron 3 of 3) intron (NM_001348534, intron 3 of 3) -8678 NM_153208 124152 Hs.460217 NM_153208 ENSG00000174628 IQCK - IQ motif containing K protein-coding chr11-335 chr11 66027438 66027682 + 12.4 0.000 Intergenic AluSz|SINE|Alu -1081 NM_053054 117144 Hs.189105 NM_053054 ENSG00000175294 CATSPER1 CATSPER|SPGF7 cation channel sperm associated 1 protein-coding chr6-825 chr6 82959543 82959787 + 12.4 0.000 intron (NR_146807, intron 9 of 10) intron (NR_146807, intron 9 of 10) 106176 NR_146809 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding chr3-1070 chr3 186242664 186242908 + 12.4 0.000 intron (NM_001346, intron 19 of 24) intron (NM_001346, intron 19 of 24) 119448 NM_001080744 1608 Hs.683449 NM_001346 ENSG00000058866 DGKG DAGK3|DGK-GAMMA diacylglycerol kinase gamma protein-coding chr6-632 chr6 153775467 153775711 + 12.4 0.000 Intergenic AluSx1|SINE|Alu -234907 NM_001145280 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding chr17-1141 chr17 44111126 44111370 + 12.4 0.000 intron (NM_001015053, intron 2 of 26) intron (NM_001015053, intron 2 of 26) -4664 NR_136415 105371789 Hs.579304 NR_136415 ENSG00000267638 LOC105371789 - uncharacterized LOC105371789 ncRNA chr6-279 chr6 65374421 65374665 + 12.4 0.000 intron (NM_198283, intron 7 of 9) L1PA8|LINE|L1 73125 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding chr7-1154 chr7 138181650 138181894 + 12.4 0.000 Intergenic LTR80B|LTR|ERVL 58014 NR_039678 100616226 NR_039678 ENSG00000284028 MIR4468 - microRNA 4468 ncRNA chr14-554 chr14 72893201 72893445 + 12.4 0.000 promoter-TSS (NM_001280544) promoter-TSS (NM_001280544) -674 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding chr11-1167 chr11 72698887 72699131 + 12.4 0.000 exon (NM_001135190, exon 15 of 31) exon (NM_001135190, exon 15 of 31) -1465 NR_146780 100506020 Hs.503165 NR_146780 ENSG00000245148 ARAP1-AS2 - ARAP1 antisense RNA 2 ncRNA chr4-817 chr4 56049362 56049606 + 12.4 0.000 Intergenic CpG 100539 NM_025009 9662 Hs.518767 NM_014645 ENSG00000174799 CEP135 CEP4|KIAA0635|MCPH8 centrosomal protein 135 protein-coding chr8-911 chr8 92101972 92102216 + 12.4 0.000 intron (NM_175634, intron 1 of 11) CpG 1132 NM_001198633 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr15-516 chr15 77872220 77872464 + 12.4 0.000 Intergenic Intergenic -51442 NM_001301186 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr21-207 chr21 34889922 34890166 + 12.4 0.000 intron (NM_001754, intron 3 of 8) CpG -1345 NM_001001890 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding chr1-2169 chr1 1891156 1891400 + 12.4 0.000 promoter-TSS (NM_002074) promoter-TSS (NM_002074) -161 NM_001282538 2782 Hs.430425 NM_002074 ENSG00000078369 GNB1 MRD42 G protein subunit beta 1 protein-coding chr16-1096 chr16 30534898 30535142 + 12.4 0.000 promoter-TSS (NM_023931) promoter-TSS (NM_023931) -50 NM_001305020 65988 Hs.592032 NM_023931 ENSG00000169955 ZNF747 - zinc finger protein 747 protein-coding chr1-2011 chr1 27547397 27547641 + 12.4 0.000 exon (NM_001029882, exon 6 of 7) exon (NM_001029882, exon 6 of 7) 55975 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr3-446 chr3 50084744 50084988 + 12.4 0.000 Intergenic SVA_D|Retroposon|SVA -4053 NR_036627 10181 Hs.439480 NM_005778 ENSG00000003756 RBM5 G15|H37|LUCA-15|LUCA15|RMB5 RNA binding motif protein 5 protein-coding chr12-1161 chr12 74171776 74172020 + 12.4 0.000 intron (NR_038300, intron 4 of 6) (A)n|Simple_repeat|Simple_repeat 120733 NR_038300 100507377 Hs.455715 NR_038300 ENSG00000251138 LOC100507377 - uncharacterized LOC100507377 ncRNA chr22-272 chr22 44717104 44717348 + 12.4 0.000 intron (NM_181334, intron 2 of 14) AluSq|SINE|Alu 15022 NM_181333 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding chr2-1732 chr2 74411261 74411505 + 12.4 0.000 Intergenic AluSp|SINE|Alu 6334 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding chr19-1211 chr19 17311969 17312213 + 12.4 0.000 intron (NM_024050, intron 1 of 4) MIRb|SINE|MIR 2528 NM_024050 79016 Hs.466154 NM_024050 ENSG00000130311 DDA1 C19orf58|PCIA1 DET1 and DDB1 associated 1 protein-coding chr16-848 chr16 69513979 69514223 + 12.4 0.000 Intergenic Intergenic 51767 NR_031719 100302119 NR_031719 ENSG00000223109 MIR1538 MIRN1538|hsa-mir-1538 microRNA 1538 ncRNA chr10-961 chr10 133350992 133351236 + 12.4 0.000 intron (NM_001145201, intron 2 of 4) intron (NM_001145201, intron 2 of 4) 3741 NM_001145201 118471 Hs.15951 NM_145202 ENSG00000165828 PRAP1 PRO1195|UPA proline rich acidic protein 1 protein-coding chr22-568 chr22 28442906 28443150 + 12.4 0.000 intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) -16841 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA chr1-1067 chr1 150244558 150244802 + 12.4 0.000 Intergenic AluJb|SINE|Alu -8568 NM_001280559 81611 Hs.656466 NM_030920 ENSG00000143401 ANP32E LANP-L|LANPL acidic nuclear phosphoprotein 32 family member E protein-coding chr22-434 chr22 23648383 23648627 + 12.4 0.000 intron (NR_024448, intron 11 of 11) AluSx|SINE|Alu -16184 NM_016449 51233 Hs.517466 NM_016449 ENSG00000189269 DRICH1 C22orf43|KB-208E9.1 aspartate rich 1 protein-coding chr2-1219 chr2 36951747 36951991 + 12.4 0.000 intron (NM_003162, intron 1 of 17) MER1B|DNA|hAT-Charlie 14667 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr6-387 chr6 35297617 35297861 + 12.4 0.000 promoter-TSS (NM_022047) promoter-TSS (NM_022047) -79 NM_022047 50619 Hs.15476 NM_022047 ENSG00000023892 DEF6 IBP|SLAT|SWAP70L DEF6 guanine nucleotide exchange factor protein-coding chr8-993 chr8 143360749 143360993 + 12.4 0.000 promoter-TSS (NM_001258446) promoter-TSS (NM_001258446) -894 NM_001258447 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr16-942 chr16 35148640 35148884 + 12.4 0.000 Intergenic Intergenic 21629 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin conjugating enzyme E2 M pseudogene 1 pseudo chr1-1297 chr1 22710449 22710693 + 12.4 0.000 promoter-TSS (NM_001309193) promoter-TSS (NM_001309193) -267 NM_017449 2048 Hs.380705 NM_004442 ENSG00000133216 EPHB2 CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5 EPH receptor B2 protein-coding chr15-408 chr15 98800741 98800985 + 12.4 0.000 intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 16437 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA chr2-1381 chr2 219521253 219521497 + 12.4 0.000 intron (NM_018674, intron 1 of 9) intron (NM_018674, intron 1 of 9) 7205 NM_018674 55515 Hs.87469 NM_018674 ENSG00000072182 ASIC4 ACCN4|BNAC4 acid sensing ion channel subunit family member 4 protein-coding chr1-2657 chr1 226133121 226133365 + 12.4 0.000 Intergenic Intergenic -14760 NR_146443 107985353 Hs.735455 NR_146443 ENSG00000234478 ACBD3-AS1 - ACBD3 antisense RNA 1 ncRNA chr4-1009 chr4 82618524 82618768 + 12.4 0.000 intron (NR_024087, intron 1 of 3) intron (NR_024087, intron 1 of 3) 2791 NR_024087 439934 Hs.457189 NM_001033661 ENSG00000231782 LINC00575 C4orf11 long intergenic non-protein coding RNA 575 ncRNA chr16-1020 chr16 889969 890213 + 12.4 0.000 intron (NR_147885, intron 5 of 11) intron (NR_147885, intron 5 of 11) -30942 NR_110945 101929387 Hs.737087 NR_110945 ENSG00000260439 LMF1-AS1 LA16c-366D3.1 LMF1 antisense RNA 1 ncRNA chr2-1123 chr2 134312268 134312512 + 12.4 0.000 intron (NM_001371457, intron 3 of 16) intron (NM_001371457, intron 3 of 16) 58318 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr16-865 chr16 82652617 82652861 + 12.4 0.000 intron (NM_001220488, intron 2 of 14) intron (NM_001220488, intron 2 of 14) 25770 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr17-1007 chr17 58155308 58155552 + 12.4 0.000 exon (NM_012374, exon 1 of 1) exon (NM_012374, exon 1 of 1) 276 NM_012374 26689 Hs.531188 NM_012374 ENSG00000141194 OR4D1 OR17-23|OR4D3|OR4D4P|TPCR16 olfactory receptor family 4 subfamily D member 1 protein-coding chr13-315 chr13 30421468 30421712 + 12.4 0.000 promoter-TSS (NM_001355247) promoter-TSS (NM_001355247) 654 NR_125771 103724387 NR_125771 ENSG00000225039 LINC01058 - long intergenic non-protein coding RNA 1058 ncRNA chr11-786 chr11 14643645 14643889 + 12.4 0.000 promoter-TSS (NM_001363569) promoter-TSS (NM_001363569) -37 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding chr17-1289 chr17 34638334 34638578 + 12.4 0.000 3' UTR (NM_001304438, exon 9 of 9) 3' UTR (NM_001304438, exon 9 of 9) 57707 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr1-1605 chr1 910219 910463 + 12.4 0.000 Intergenic CpG 9351 NR_026874 100130417 Hs.200644 NM_175912 ENSG00000223764 LINC02593 - long intergenic non-protein coding RNA 2593 ncRNA chr9-799 chr9 118063126 118063370 + 12.4 0.000 Intergenic L1MEc|LINE|L1 358845 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr7-1425 chr7 137760258 137760502 + 12.4 0.000 intron (NM_001321708, intron 1 of 32) intron (NM_001321708, intron 1 of 32) 85952 NM_001321709 9162 Hs.242947 NM_004717 ENSG00000157680 DGKI DGK-IOTA diacylglycerol kinase iota protein-coding chr19-1332 chr19 4683353 4683597 + 12.4 0.000 intron (NM_001242901, intron 2 of 2) intron (NM_001242901, intron 2 of 2) 4193 NM_001242901 100131094 Hs.678135 NM_001242901 DPP9-AS1 - DPP9 antisense RNA 1 protein-coding chr10-1066 chr10 132651792 132652036 + 12.4 0.000 intron (NM_005539, intron 4 of 15) intron (NM_005539, intron 4 of 15) -29361 NM_001321042 3632 Hs.523360 NM_005539 ENSG00000068383 INPP5A 5PTASE inositol polyphosphate-5-phosphatase A protein-coding chr8-889 chr8 69966897 69967141 + 12.4 0.000 Intergenic MLT1F1|LTR|ERVL-MaLR 104233 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr7-533 chr7 148698724 148698968 + 12.4 0.000 promoter-TSS (NM_001370664) intron (NM_001370663, intron 1 of 21) -57 NM_003592 8454 Hs.146806 NM_003592 ENSG00000055130 CUL1 - cullin 1 protein-coding chr3-1009 chr3 124791455 124791699 + 12.4 0.000 intron (NM_001354766, intron 9 of 13) intron (NM_001354766, intron 9 of 13) 59138 NR_036088 100422864 NR_036088 ENSG00000265981 MIR544B - microRNA 544b ncRNA chr4-656 chr4 3245789 3246033 + 12.4 0.000 intron (NM_001330620, intron 2 of 5) intron (NM_001330620, intron 2 of 5) 1542 NM_001330620 345222 Hs.442291 NM_001012982 ENSG00000188981 MSANTD1 C4orf44 Myb/SANT DNA binding domain containing 1 protein-coding chr7-1267 chr7 41886865 41887109 + 12.4 0.000 Intergenic Intergenic -183897 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr17-1306 chr17 41914446 41914690 + 12.4 0.000 intron (NM_001303275, intron 1 of 27) intron (NM_001303275, intron 1 of 27) 4383 NM_001096 47 Hs.387567 NM_001096 ENSG00000131473 ACLY ACL|ATPCL|CLATP ATP citrate lyase protein-coding chr7-168 chr7 4682117 4682361 + 12.4 0.000 promoter-TSS (NM_001037165) promoter-TSS (NM_001037165) -56 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding chr16-545 chr16 84195889 84196133 + 12.4 0.000 exon (NM_139174, exon 8 of 11) exon (NM_139174, exon 8 of 11) 1042 NR_147175 654780 Hs.8977 NM_001039504 ENSG00000250685 LOC654780 SFPQ splicing factor proline/glutamine-rich ncRNA chr20-544 chr20 19688354 19688598 + 12.4 0.000 intron (NM_020689, intron 12 of 16) intron (NM_020689, intron 12 of 16) -198045 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding chrX-480 chrX 68917454 68917698 + 12.4 0.000 Intergenic Intergenic 88579 NM_004429 1947 Hs.144700 NM_004429 ENSG00000090776 EFNB1 CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2 ephrin B1 protein-coding chr17-672 chr17 4534585 4534829 + 12.4 0.000 intron (NM_001124758, intron 9 of 12) intron (NM_001124758, intron 9 of 12) 20677 NM_014520 10514 Hs.22824 NM_014520 ENSG00000132382 MYBBP1A P160|PAP2|Pol5 MYB binding protein 1a protein-coding chr3-1235 chr3 24521797 24522041 + 12.4 0.000 Intergenic CpG -26211 NM_001354708 7068 Hs.187861 NM_000461 ENSG00000151090 THRB C-ERBA-2|C-ERBA-BETA|ERBA2|GRTH|NR1A2|PRTH|THR1|THRB1|THRB2 thyroid hormone receptor beta protein-coding chr17-887 chr17 76182315 76182559 + 12.4 0.000 intron (NM_052916, intron 2 of 18) intron (NM_052916, intron 2 of 18) -41192 NM_001454 2302 Hs.651204 NM_001454 ENSG00000129654 FOXJ1 FKHL13|HFH-4|HFH4 forkhead box J1 protein-coding chr8-798 chr8 144020498 144020742 + 12.4 0.000 intron (NM_198572, intron 1 of 4) intron (NM_198572, intron 1 of 4) 8340 NM_001134374 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding chr9-598 chr9 87758845 87759089 + 12.4 0.000 Intergenic SVA_D|Retroposon|SVA -13948 NR_027917 392360 Hs.690450 NM_001023564 ENSG00000188029 CTSL3P CTSL3|HCTSL-s cathepsin L family member 3, pseudogene pseudo chr12-1006 chr12 120640915 120641159 + 12.4 0.000 exon (NM_001033677, exon 1 of 6) exon (NM_001033677, exon 1 of 6) 418 NM_001033677 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr11-1662 chr11 124758833 124759077 + 12.4 0.000 promoter-TSS (NR_120577) promoter-TSS (NR_120577) -179 NR_120577 101929340 Hs.173840 NR_120577 ENSG00000250073 LOC101929340 - uncharacterized LOC101929340 ncRNA chr4-674 chr4 16573547 16573791 + 12.4 0.000 intron (NM_001304435, intron 5 of 7) intron (NM_001304435, intron 5 of 7) 324976 NM_001290 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr11-992 chr11 61542220 61542464 + 12.4 0.000 exon (NM_001365809, exon 6 of 13) exon (NM_001365809, exon 6 of 13) 534 NM_001370210 9066 Hs.131188 NM_004200 ENSG00000011347 SYT7 IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII synaptotagmin 7 protein-coding chr2-1535 chr2 184598653 184598897 + 12.4 0.000 5' UTR (NM_194250, exon 1 of 4) 5' UTR (NM_194250, exon 1 of 4) 246 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding chr7-1362 chr7 101171068 101171312 + 12.4 0.000 3' UTR (NM_198571, exon 4 of 4) 3' UTR (NM_198571, exon 4 of 4) -5621 NM_003378 7425 Hs.587325 NM_003378 ENSG00000128564 VGF SCG7|SgVII VGF nerve growth factor inducible protein-coding chrX-186 chrX 125160183 125160427 + 12.4 0.000 Intergenic AluSz|SINE|Alu -159566 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr11-1540 chr11 65547840 65548084 + 12.4 0.000 exon (NM_021070, exon 12 of 27) exon (NM_021070, exon 12 of 27) 10266 NM_021070 4054 Hs.289019 NM_021070 ENSG00000168056 LTBP3 DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425 latent transforming growth factor beta binding protein 3 protein-coding chr2-1413 chr2 240002370 240002614 + 12.4 0.000 intron (NR_136157, intron 6 of 7) intron (NR_136157, intron 6 of 7) 22850 NM_001322020 4705 Hs.277677 NM_004544 ENSG00000130414 NDUFA10 CI-42KD|CI-42k|MC1DN22 NADH:ubiquinone oxidoreductase subunit A10 protein-coding chr3-1247 chr3 38114823 38115067 + 12.4 0.000 intron (NM_007335, intron 26 of 36) intron (NM_007335, intron 26 of 36) 22182 NM_001607 30 Hs.643487 NM_001607 ENSG00000060971 ACAA1 ACAA|PTHIO|THIO acetyl-CoA acyltransferase 1 protein-coding chr11-1527 chr11 64854916 64855160 + 12.4 0.000 intron (NM_006795, intron 4 of 4) MIRb|SINE|MIR -10385 NM_017525 55561 Hs.293590 NM_017525 ENSG00000171219 CDC42BPG DMPK2|HSMDPKIN|KAPPA-200|MRCKG|MRCKgamma CDC42 binding protein kinase gamma protein-coding chr1-2698 chr1 248810759 248811003 + 12.4 0.000 3' UTR (NM_030645, exon 7 of 7) 3' UTR (NM_030645, exon 7 of 7) 14485 NM_001322463 80851 Hs.298573 NM_030645 ENSG00000175137 SH3BP5L - SH3 binding domain protein 5 like protein-coding chr2-1473 chr2 55862532 55862776 + 12.4 0.000 Intergenic Intergenic 61128 NM_001039348 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding chr1-2273 chr1 19918874 19919118 + 12.4 0.000 Intergenic Intergenic 4621 NM_014589 30814 Hs.272372 NM_014589 ENSG00000188784 PLA2G2E GIIE sPLA2|sPLA2-IIE phospholipase A2 group IIE protein-coding chrX-187 chrX 125644843 125645087 + 12.4 0.000 Intergenic L1PA15|LINE|L1 325094 NM_001195272 100129520 NM_001195272 ENSG00000282815 TEX13C - TEX13 family member C protein-coding chr1-2482 chr1 114242593 114242837 + 12.4 0.000 Intergenic SVA_A|Retroposon|SVA -88846 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding chr1-1637 chr1 6026370 6026614 + 12.2 0.000 intron (NM_172130, intron 1 of 14) intron (NM_172130, intron 1 of 14) 159 NM_172130 8514 Hs.440497 NM_003636 ENSG00000069424 KCNAB2 AKR6A5|HKvbeta2|HKvbeta2.1|HKvbeta2.2|KCNA2B|KV-BETA-2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 protein-coding chr10-784 chr10 5977453 5977697 + 12.2 0.000 promoter-TSS (NM_001256765) promoter-TSS (NM_001256765) -32 NM_172200 3601 Hs.445124 NM_002189 ENSG00000134470 IL15RA CD215 interleukin 15 receptor subunit alpha protein-coding chr21-167 chr21 33229947 33230191 + 12.2 0.000 5' UTR (NM_001289126, exon 1 of 8) 5' UTR (NM_001289126, exon 1 of 8) 131 NM_207584 3455 Hs.708195 NM_000874 ENSG00000159110 IFNAR2 IFN-R|IFN-alpha-REC|IFNABR|IFNARB|IMD45 interferon alpha and beta receptor subunit 2 protein-coding chr3-921 chr3 9504728 9504972 + 12.2 0.000 intron (NM_198560, intron 3 of 3) L1ME3F|LINE|L1 48972 NM_198560 375323 Hs.56782 NM_198560 ENSG00000156959 LHFPL4 GARLH4 LHFPL tetraspan subfamily member 4 protein-coding chr17-1127 chr17 34626323 34626567 + 12.2 0.000 exon (NM_001304438, exon 2 of 9) exon (NM_001304438, exon 2 of 9) 45696 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding chr19-1019 chr19 50416533 50416777 + 12.2 0.000 exon (NM_002691, exon 24 of 27) exon (NM_002691, exon 24 of 27) -2283 NM_001243999 6689 Hs.437905 NM_003121 ENSG00000269404 SPIB SPI-B Spi-B transcription factor protein-coding chr2-1824 chr2 131105861 131106105 + 12.2 0.000 intron (NM_001309448, intron 1 of 6) intron (NM_001309448, intron 1 of 6) 1136 NM_001309450 55041 Hs.469944 NM_017958 ENSG00000115762 PLEKHB2 EVT2 pleckstrin homology domain containing B2 protein-coding chr11-1279 chr11 45738217 45738461 + 12.2 0.000 Intergenic SVA_F|Retroposon|SVA 16031 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA chr20-414 chr20 25623916 25624160 + 12.2 0.000 promoter-TSS (NR_126466) promoter-TSS (NR_126466) -7 NR_126466 102724826 Hs.633621 NR_126465 ENSG00000213742 ZNF337-AS1 - ZNF337 antisense RNA 1 ncRNA chr14-506 chr14 22725098 22725342 + 12.2 0.000 Intergenic LTR5_Hs|LTR|ERVK -41468 NM_005015 5018 Hs.151134 NM_005015 ENSG00000155463 OXA1L OXA1 OXA1L mitochondrial inner membrane protein protein-coding chr5-692 chr5 144852110 144852354 + 12.2 0.000 Intergenic L1MC1|LINE|L1 646841 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding chr6-966 chr6 39316225 39316469 + 12.2 0.000 exon (NM_001135106, exon 5 of 5) exon (NM_001135106, exon 5 of 5) -1928 NM_001135111 89822 Hs.162282 NM_031460 ENSG00000124780 KCNK17 K2p17.1|TALK-2|TALK2|TASK-4|TASK4 potassium two pore domain channel subfamily K member 17 protein-coding chr8-836 chr8 29068044 29068288 + 12.2 0.000 3' UTR (NM_015254, exon 40 of 40) 3' UTR (NM_015254, exon 40 of 40) 176852 NM_001324382 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding GL000216.2-16 GL000216.2 3139 3383 + 12.2 0.000 NA NA NA NA KI270756.1-1 KI270756.1 643 887 + 12.2 0.000 NA NA NA NA chr2-1882 chr2 186131726 186131970 + 12.2 0.000 Intergenic AluSx|SINE|Alu -45531 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA chr17-798 chr17 74914414 74914658 + 12.2 0.000 Intergenic AluJb|SINE|Alu 8719 NM_173477 124590 Hs.376688 NM_173477 ENSG00000182040 USH1G ANKS4A|SANS USH1 protein network component sans protein-coding chr20-678 chr20 63944147 63944391 + 12.2 0.000 intron (NR_148442, intron 7 of 15) intron (NR_148442, intron 7 of 15) -1543 NR_030377 693232 NR_030377 ENSG00000207554 MIR647 MIRN647|hsa-mir-647 microRNA 647 ncRNA chr18-352 chr18 61399100 61399344 + 12.2 0.000 intron (NM_031891, intron 1 of 11) intron (NM_031891, intron 1 of 11) 65792 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding chr4-435 chr4 148744076 148744320 + 12.2 0.000 Intergenic (TTTC)n|Simple_repeat|Simple_repeat 198180 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA chr9-1101 chr9 113565243 113565487 + 12.2 0.000 intron (NM_134427, intron 1 of 4) intron (NM_134427, intron 1 of 4) 308 NM_001351526 5998 Hs.494875 NM_017790 ENSG00000138835 RGS3 C2PA|RGP3 regulator of G protein signaling 3 protein-coding chr17-801 chr17 75832795 75833039 + 12.2 0.000 intron (NM_199242, intron 25 of 31) intron (NM_199242, intron 25 of 31) 11800 NM_199242 201294 Hs.41045 NM_199242 ENSG00000092929 UNC13D FHL3|HLH3|HPLH3|Munc13-4 unc-13 homolog D protein-coding chr12-1144 chr12 58920434 58920678 + 12.2 0.000 promoter-TSS (NM_153377) promoter-TSS (NM_153377) -18 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding chr5-229 chr5 36876991 36877235 + 12.2 0.000 promoter-TSS (NR_046262) promoter-TSS (NR_046262) 344 NM_015384 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding chr4-855 chr4 159075673 159075917 + 12.2 0.000 Intergenic Intergenic -28256 NM_001351724 9693 Hs.744884 NM_014247 ENSG00000109756 RAPGEF2 CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP Rap guanine nucleotide exchange factor 2 protein-coding chr8-700 chr8 141872583 141872827 + 12.2 0.000 Intergenic Intergenic -86392 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr1-2220 chr1 9242648 9242892 + 12.2 0.000 intron (NM_001282587, intron 1 of 4) intron (NM_001282587, intron 1 of 4) 2923 NM_001282587 9563 Hs.463511 NM_004285 ENSG00000049239 H6PD CORTRD1|G6PDH|GDH hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase protein-coding chr17-310 chr17 43003977 43004221 + 12.2 0.000 Intergenic Intergenic -2685 NM_005533 3430 Hs.632258 NM_005533 ENSG00000068079 IFI35 IFP35 interferon induced protein 35 protein-coding chr19-1371 chr19 40689994 40690238 + 12.2 0.000 promoter-TSS (NM_001289980) promoter-TSS (NM_001289980) 48 NM_001289980 9253 Hs.326953 NM_004756 ENSG00000105245 NUMBL CAG3A|CTG3a|NBL|NUMB-R|NUMBLIKE|NUMBR|TNRC23 NUMB like endocytic adaptor protein protein-coding chr19-1520 chr19 12659295 12659539 + 12.2 0.000 intron (NM_000528, intron 7 of 23) AluSz|SINE|Alu 7325 NM_000528 4125 Hs.356769 NM_000528 ENSG00000104774 MAN2B1 LAMAN|MANB mannosidase alpha class 2B member 1 protein-coding chr12-1108 chr12 51591628 51591872 + 12.2 0.000 intron (NM_001369788, intron 1 of 25) intron (NM_001369788, intron 1 of 25) 514 NM_001177984 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding chr2-814 chr2 236322062 236322306 + 12.2 0.000 Intergenic LTR19B|LTR|ERV1 -57839 NM_212556 401036 Hs.639909 NM_212556 ENSG00000182177 ASB18 ASB-18 ankyrin repeat and SOCS box containing 18 protein-coding chr1-2047 chr1 66242861 66243105 + 12.2 0.000 intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) -89125 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding chr14-747 chr14 73303430 73303674 + 12.2 0.000 intron (NM_001005745, intron 5 of 10) AluSx|SINE|Alu -57551 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chr19-732 chr19 6653933 6654177 + 12.2 0.000 Intergenic AluSx|SINE|Alu 16103 NM_172014 8740 Hs.129708 NM_003807 ENSG00000125735 TNFSF14 CD258|HVEML|LIGHT|LTg TNF superfamily member 14 protein-coding chr11-916 chr11 66744522 66744766 + 12.2 0.000 promoter-TSS (NM_001302084) promoter-TSS (NM_001302084) -92 NM_024650 79703 Hs.292088 NM_024650 ENSG00000173715 C11orf80 HYDM4|TOP6BL|TOPOVIBL chromosome 11 open reading frame 80 protein-coding chr8-710 chr8 143418353 143418597 + 12.2 0.000 intron (NR_126358, intron 1 of 1) (CCAC)n|Simple_repeat|Simple_repeat 796 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA chr16-922 chr16 2114218 2114462 + 12.2 0.000 exon (NM_001009944, exon 11 of 46) exon (NM_001009944, exon 11 of 46) -7587 NR_106775 102465429 NR_106775 ENSG00000284008 MIR6511B1 MIR6511B-1|hsa-mir-6511b-1 microRNA 6511b-1 ncRNA chr12-1190 chr12 101407779 101408023 + 12.2 0.000 promoter-TSS (NM_001177) promoter-TSS (NM_001177) -81 NM_001301068 400 Hs.372616 NM_001177 ENSG00000120805 ARL1 ARFL1 ADP ribosylation factor like GTPase 1 protein-coding chr8-756 chr8 80874409 80874653 + 12.2 0.000 promoter-TSS (NM_001367783) promoter-TSS (NM_001367783) -63 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding chr1-2663 chr1 228250036 228250280 + 12.2 0.000 exon (NM_001098623, exon 14 of 105) exon (NM_001098623, exon 14 of 105) -36494 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA chr14-555 chr14 73259176 73259420 + 12.2 0.000 exon (NM_173462, exon 15 of 26) exon (NM_173462, exon 15 of 26) -13297 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA chrX-262 chrX 106611806 106612050 + 12.2 0.000 promoter-TSS (NM_018015) promoter-TSS (NM_018015) -2 NM_001184782 55086 Hs.274267 NM_018015 ENSG00000147231 RADX CXorf57 RPA1 related single stranded DNA binding protein, X-linked protein-coding chr3-1391 chr3 123475079 123475323 + 12.2 0.000 Intergenic Intergenic -26656 NM_183357 111 Hs.593292 NM_183357 ENSG00000173175 ADCY5 AC5|FDFM adenylate cyclase 5 protein-coding chr18-223 chr18 13382049 13382293 + 12.2 0.000 intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 45363 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA chr20-139 chr20 19028170 19028414 + 12.2 0.000 Intergenic Intergenic -184350 NM_020689 57419 Hs.654790 NM_020689 ENSG00000185052 SLC24A3 NCKX3 solute carrier family 24 member 3 protein-coding chr12-711 chr12 128489437 128489681 + 12.2 0.000 intron (NM_001136103, intron 2 of 8) (TA)n|Simple_repeat|Simple_repeat 195467 NR_037406 100500817 NR_037406 ENSG00000265635 MIR3612 - microRNA 3612 ncRNA chr16-554 chr16 86576165 86576409 + 12.2 0.000 Intergenic CpG -2222 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding chr1-1442 chr1 218365432 218365676 + 12.2 0.000 intron (NR_138149, intron 2 of 7) intron (NR_138149, intron 2 of 7) -19876 NR_046268 728463 Hs.568469 NR_046268 ENSG00000232480 TGFB2-AS1 - TGFB2 antisense RNA 1 (head to head) ncRNA chr17-814 chr17 79522876 79523120 + 12.2 0.000 intron (NM_001350451, intron 1 of 14) L1MB3|LINE|L1 -6850 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding chr2-1836 chr2 144510579 144510823 + 12.2 0.000 TTS (NR_033258) TTS (NR_033258) -8913 NR_040248 100303491 Hs.560789 NR_040248 ENSG00000238057 ZEB2-AS1 ZEB2-AS|ZEB2AS|ZEB2NAT ZEB2 antisense RNA 1 ncRNA chrX-15 chrX 1367436 1367680 + 12.2 0.000 intron (NM_002183, intron 9 of 11) CpG 24555 NM_001636 293 Hs.350927 NM_001636 ENSG00000169100 SLC25A6 AAC3|ANT|ANT 2|ANT 3|ANT3|ANT3Y solute carrier family 25 member 6 protein-coding chr12-1185 chr12 96227495 96227739 + 12.2 0.000 intron (NM_005230, intron 2 of 4) intron (NM_005230, intron 2 of 4) -27881 NM_001303511 2004 Hs.46523 NM_005230 ENSG00000111145 ELK3 ERP|NET|SAP-2|SAP2 ETS transcription factor ELK3 protein-coding chr6-1044 chr6 110062588 110062832 + 12.2 0.000 Intergenic Intergenic 84399 NM_005284 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr11-1283 chr11 46350632 46350876 + 12.2 0.000 intron (NM_001199266, intron 1 of 30) intron (NM_001199266, intron 1 of 30) 3291 NM_001199268 8525 Hs.502461 NM_003646 ENSG00000149091 DGKZ DAGK5|DAGK6|DGK-ZETA|hDGKzeta diacylglycerol kinase zeta protein-coding chr12-891 chr12 110281165 110281409 + 12.2 0.000 promoter-TSS (NM_001681) promoter-TSS (NM_001681) 40 NM_001681 488 Hs.506759 NM_001681 ENSG00000174437 ATP2A2 ATP2B|DAR|DD|SERCA2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 protein-coding chr11-1170 chr11 73294302 73294546 + 12.2 0.000 intron (NM_001277207, intron 2 of 2) intron (NM_001277207, intron 2 of 2) -13852 NM_014786 9828 Hs.533719 NM_014786 ENSG00000110237 ARHGEF17 P164RHOGEF|RHOGEF17|TEM4|p164-RhoGEF Rho guanine nucleotide exchange factor 17 protein-coding chr1-1069 chr1 150728738 150728982 + 12.2 0.000 Intergenic SVA_F|Retroposon|SVA -7965 NM_001199829 84072 Hs.298312 NM_032132 ENSG00000143452 HORMAD1 CT46|NOHMA HORMA domain containing 1 protein-coding chr17-1230 chr17 7563006 7563250 + 12.2 0.000 non-coding (NR_037926, exon 2 of 22) non-coding (NR_037926, exon 2 of 22) 1136 NR_037926 100533955 Hs.129673 NR_037926 SENP3-EIF4A1 - SENP3-EIF4A1 readthrough (NMD candidate) ncRNA chr1-1820 chr1 116373141 116373385 + 12.2 0.000 promoter-TSS (NM_000701) promoter-TSS (NM_000701) 19 NM_000701 476 Hs.371889 NM_000701 ENSG00000163399 ATP1A1 CMT2DD|HOMGSMR2 ATPase Na+/K+ transporting subunit alpha 1 protein-coding chr17-928 chr17 7205096 7205340 + 12.2 0.000 promoter-TSS (NM_001321077) promoter-TSS (NM_001321077) -31 NM_001321076 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr19-1250 chr19 41937124 41937368 + 12.2 0.000 Intergenic (TGGCC)n|Simple_repeat|Simple_repeat 8426 NR_135626 100505585 NR_135626 ENSG00000076928 LOC100505585 - uncharacterized LOC100505585 ncRNA chr19-1503 chr19 10420776 10421020 + 12.2 0.000 exon (NM_001111307, exon 1 of 15) exon (NM_001111307, exon 1 of 15) 360 NM_001111307 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr19-1016 chr19 49851064 49851308 + 12.2 0.000 promoter-TSS (NM_017432) promoter-TSS (NM_017432) 27 NM_001305105 53635 Hs.587979 NM_017432 ENSG00000104960 PTOV1 ACID2|PTOV-1 PTOV1 extended AT-hook containing adaptor protein protein-coding chr4-777 chr4 575789 576033 + 12.2 0.000 exon (NM_001362796, exon 1 of 1) exon (NM_001362796, exon 1 of 1) 389 NM_001362796 112441426 NM_001362796 TMEM271 - transmembrane protein 271 protein-coding chr19-790 chr19 7534069 7534313 + 12.2 0.000 promoter-TSS (NM_001166112) promoter-TSS (NM_001166112) 27 NM_006702 10908 Hs.631863 NM_006702 ENSG00000032444 PNPLA6 BNHS|LNMS|NTE|NTEMND|OMCS|SPG39|iPLA2delta|sws patatin like phospholipase domain containing 6 protein-coding chr9-1186 chr9 23051641 23051885 + 12.2 0.000 Intergenic AluSz|SINE|Alu 405563 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr6-775 chr6 6972640 6972884 + 12.2 0.000 Intergenic Intergenic -134981 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chrX-434 chrX 30748805 30749049 + 12.2 0.000 Intergenic Intergenic -85696 NR_145449 727682 NR_145449 TAB3-AS1 CXorf29 TAB3 antisense RNA 1 ncRNA chr2-1276 chr2 86114379 86114623 + 12.2 0.000 intron (NM_017952, intron 4 of 23) AluYf1|SINE|Alu 8266 NM_017952 55037 Hs.323489 NM_017952 ENSG00000132300 PTCD3 MRP-S39 pentatricopeptide repeat domain 3 protein-coding chr12-1149 chr12 62213393 62213637 + 12.2 0.000 Intergenic AluSc|SINE|Alu -20676 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr9-1415 chr9 136537477 136537721 + 12.2 0.000 intron (NM_017617, intron 2 of 33) AluJo|SINE|Alu 8449 NM_017617 4851 Hs.495473 NM_017617 ENSG00000148400 NOTCH1 AOS5|AOVD1|TAN1|hN1 notch receptor 1 protein-coding chr1-1203 chr1 164236019 164236263 + 12.2 0.000 Intergenic AluY|SINE|Alu -323219 NM_001204961 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding chr3-969 chr3 52493507 52493751 + 12.2 0.000 TTS (NM_007184) TTS (NM_007184) -1709 NM_015136 23166 Hs.301989 NM_015136 ENSG00000010327 STAB1 CLEVER-1|FEEL-1|FELE-1|FEX1|SCARH2|STAB-1 stabilin 1 protein-coding chr4-772 chr4 182867683 182867927 + 12.2 0.000 Intergenic Intergenic 49448 NM_001351747 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding chr9-1157 chr9 137828450 137828694 + 12.2 0.000 intron (NM_001354263, intron 25 of 26) intron (NM_001354263, intron 25 of 26) -9847 NR_030333 693187 NR_030333 ENSG00000207693 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA chr14-250 chr14 105449476 105449720 + 12.2 0.000 intron (NM_001203258, intron 4 of 20) intron (NM_001203258, intron 4 of 20) -23347 NR_073082 1397 Hs.534309 NM_001312 ENSG00000182809 CRIP2 CRIP|CRP2|ESP1 cysteine rich protein 2 protein-coding chr2-707 chr2 219627625 219627869 + 12.2 0.000 intron (NM_201574, intron 1 of 22) CpG 117 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr7-934 chr7 38760179 38760423 + 12.2 0.000 intron (NM_014396, intron 17 of 28) MER4CL34|LTR|ERV1 -73212 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo chr20-440 chr20 48091797 48092041 + 12.2 0.000 Intergenic AluSx4|SINE|Alu -101802 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA chr11-1238 chr11 131401804 131402048 + 12.2 0.000 intron (NM_001352003, intron 1 of 8) intron (NM_001352003, intron 1 of 8) 31311 NM_001048209 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr19-980 chr19 36190489 36190733 + 12.2 0.000 intron (NM_001366188, intron 4 of 4) MLT1D|LTR|ERVL-MaLR 22968 NM_001366189 147929 Hs.596338 NM_152477 ENSG00000196357 ZNF565 - zinc finger protein 565 protein-coding chr20-617 chr20 47336527 47336771 + 12.2 0.000 intron (NM_001281774, intron 3 of 23) intron (NM_001281774, intron 3 of 23) 15248 NM_001363741 23613 Hs.446240 NM_012408 ENSG00000101040 ZMYND8 PRKCBP1|PRO2893|RACK7 zinc finger MYND-type containing 8 protein-coding chr12-468 chr12 48350885 48351129 + 12.2 0.000 promoter-TSS (NM_152320) promoter-TSS (NM_152320) -88 NM_152320 121274 Hs.23492 NM_152320 ENSG00000167528 ZNF641 - zinc finger protein 641 protein-coding chr10-1338 chr10 132209188 132209432 + 12.2 0.000 non-coding (NR_134911, exon 11 of 13) non-coding (NR_134911, exon 11 of 13) 22362 NM_006426 10570 Hs.100058 NM_006426 ENSG00000151640 DPYSL4 CRMP3|DRP-4|ULIP4 dihydropyrimidinase like 4 protein-coding chr5-1086 chr5 117872021 117872265 + 12.2 0.000 intron (NR_104997, intron 1 of 2) MER89|LTR|ERV1 141782 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA chr11-1547 chr11 66396409 66396653 + 12.2 0.000 Intergenic AluJb|SINE|Alu -24055 NM_001300869 3177 Hs.569017 NM_001532 ENSG00000174669 SLC29A2 DER12|ENT2|HNP36 solute carrier family 29 member 2 protein-coding chr12-1052 chr12 12585478 12585722 + 12.2 0.000 Intergenic Intergenic -22737 NM_030640 80824 Hs.536535 NM_030640 ENSG00000111266 DUSP16 MKP-7|MKP7 dual specificity phosphatase 16 protein-coding chr6-874 chr6 158143077 158143321 + 12.1 0.000 intron (NM_032861, intron 7 of 16) intron (NM_032861, intron 7 of 16) 25063 NM_032861 84947 Hs.154706 NM_032861 ENSG00000122335 SERAC1 - serine active site containing 1 protein-coding chr19-1225 chr19 29715262 29715506 + 12.1 0.000 promoter-TSS (NM_031448) promoter-TSS (NM_031448) -123 NM_001282931 83636 Hs.529094 NM_031448 ENSG00000131943 C19orf12 MPAN|NBIA3|NBIA4|SPG43 chromosome 19 open reading frame 12 protein-coding chr19-1429 chr19 1516069 1516313 + 12.1 0.000 Intergenic Intergenic -3172 NM_001367197 339366 Hs.371674 NM_213604 ENSG00000185761 ADAMTSL5 THSD6 ADAMTS like 5 protein-coding chr11-1142 chr11 65627356 65627600 + 12.1 0.000 exon (NM_032223, exon 22 of 35) exon (NM_032223, exon 22 of 35) -8832 NR_039839 100616292 NR_039839 ENSG00000266041 MIR4690 - microRNA 4690 ncRNA chr19-1538 chr19 16243367 16243611 + 12.1 0.000 3' UTR (NM_001130524, exon 13 of 13) 3' UTR (NM_001130524, exon 13 of 13) 45578 NM_032493 8907 Hs.71040 NM_032493 ENSG00000072958 AP1M1 AP47|CLAPM2|CLTNM|MU-1A adaptor related protein complex 1 subunit mu 1 protein-coding chr5-165 chr5 126519210 126519454 + 12.1 0.000 Intergenic Intergenic 54182 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr15-610 chr15 32979642 32979886 + 12.1 0.000 intron (NM_001277313, intron 7 of 20) intron (NM_001277313, intron 7 of 20) 88410 NM_001103184 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding chr8-748 chr8 55990090 55990334 + 12.1 0.000 intron (NM_002350, intron 10 of 12) AluSx1|SINE|Alu 83689 NR_002437 26795 NR_002437 ENSG00000238650 SNORD54 RNU54|U54 small nucleolar RNA, C/D box 54 snoRNA chr5-980 chr5 11028075 11028319 + 12.1 0.000 intron (NM_001288715, intron 15 of 20) intron (NM_001288715, intron 15 of 20) -266963 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding chrX-323 chrX 112014801 112015045 + 12.1 0.000 intron (NM_012471, intron 1 of 10) MER5B|DNA|hAT-Charlie 67853 NM_012471 7224 Hs.657709 NM_012471 ENSG00000072315 TRPC5 PPP1R159|TRP5 transient receptor potential cation channel subfamily C member 5 protein-coding chr1-1712 chr1 31434617 31434861 + 12.1 0.000 TTS (NM_018565) TTS (NM_018565) 20926 NM_018565 347735 Hs.270655 NM_018565 ENSG00000168528 SERINC2 FKSG84|PRO0899|TDE2|TDE2L serine incorporator 2 protein-coding chr10-1306 chr10 122624722 122624966 + 12.1 0.000 intron (NM_004406, intron 28 of 39) intron (NM_004406, intron 28 of 39) -48038 NM_001364461 112577516 NM_001364461 LOC112577516 - carbohydrate-binding protein AQN-1-like protein-coding chr4-455 chr4 48016695 48016939 + 12.1 0.000 promoter-TSS (NM_207330) promoter-TSS (NM_207330) 45 NM_207330 152519 Hs.134190 NM_207330 ENSG00000163293 NIPAL1 NPAL1 NIPA like domain containing 1 protein-coding chr9-1178 chr9 15735137 15735381 + 12.1 0.000 intron (NM_001355547, intron 15 of 24) intron (NM_001355547, intron 15 of 24) 171281 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr10-1151 chr10 48497194 48497438 + 12.1 0.000 intron (NR_144642, intron 3 of 9) intron (NR_144642, intron 3 of 9) -3666 NM_001256026 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding chr7-664 chr7 151043677 151043921 + 12.1 0.000 intron (NM_001282292, intron 14 of 15) G-rich|Low_complexity|Low_complexity -4493 NM_020321 9311 Hs.647113 NM_004769 ENSG00000213199 ASIC3 ACCN3|DRASIC|SLNAC1|TNaC1 acid sensing ion channel subunit 3 protein-coding chr3-1141 chr3 94861471 94861715 + 12.1 0.000 Intergenic L1PA16|LINE|L1 -76670 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA chr16-1199 chr16 85173779 85174023 + 12.1 0.000 Intergenic Intergenic -33895 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr16-841 chr16 67164284 67164528 + 12.1 0.000 TTS (NM_018378) TTS (NM_018378) 645 NM_001040667 3299 Hs.512156 NM_001538 ENSG00000102878 HSF4 CTM|CTRCT5 heat shock transcription factor 4 protein-coding chr16-975 chr16 85385810 85386054 + 12.1 0.000 Intergenic Intergenic -79607 NR_049816 100847022 NR_049816 ENSG00000266307 MIR5093 - microRNA 5093 ncRNA chr4-490 chr4 1369171 1369415 + 12.1 0.000 intron (NM_020894, intron 8 of 13) intron (NM_020894, intron 8 of 13) 21737 NM_001317935 57654 Hs.380475 NM_020894 ENSG00000163945 UVSSA KIAA1530|UVSS3 UV stimulated scaffold protein A protein-coding chr8-704 chr8 142606037 142606281 + 12.1 0.000 Intergenic Intergenic 8320 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr4-664 chr4 6520305 6520549 + 12.1 0.000 intron (NM_001206994, intron 2 of 9) intron (NM_001206994, intron 2 of 9) 35188 NM_001206995 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr11-1022 chr11 87392068 87392312 + 12.1 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 327221 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA chr4-1048 chr4 110287236 110287480 + 12.1 0.000 Intergenic MER110A|LTR|ERV1 -88743 NM_024090 79071 Hs.412939 NM_024090 ENSG00000170522 ELOVL6 FACE|FAE|LCE ELOVL fatty acid elongase 6 protein-coding chr11-1441 chr11 32779065 32779309 + 12.1 0.000 intron (NM_001008391, intron 1 of 17) Charlie17a|DNA|hAT-Charlie 15471 NM_001008391 493860 Hs.706808 NM_001008391 ENSG00000186714 CCDC73 NY-SAR-79 coiled-coil domain containing 73 protein-coding chr14-701 chr14 51722756 51723000 + 12.1 0.000 intron (NM_001042481, intron 13 of 14) intron (NM_001042481, intron 13 of 14) 5595 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding chr3-1060 chr3 183254308 183254552 + 12.1 0.000 intron (NM_032047, intron 1 of 1) CpG 1177 NM_032047 84002 Hs.718506 NM_032047 ENSG00000176597 B3GNT5 B3GN-T5|beta3Gn-T5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 protein-coding chr4-894 chr4 2592816 2593060 + 12.1 0.000 intron (NM_001366318, intron 1 of 20) L1MEc|LINE|L1 -32494 NM_001256666 8603 Hs.652364 NM_003704 ENSG00000125386 FAM193A C4orf8|RES4-22 family with sequence similarity 193 member A protein-coding chr8-937 chr8 109067440 109067684 + 12.1 0.000 Intergenic AluSx|SINE|Alu -19066 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding chr2-864 chr2 166375621 166375865 + 12.1 0.000 5' UTR (NM_002977, exon 1 of 27) 5' UTR (NM_002977, exon 1 of 27) 201 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr3-1215 chr3 11555242 11555486 + 12.1 0.000 TTS (NM_001284390) TTS (NM_001284390) 13434 NM_001128221 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding chr10-953 chr10 132250057 132250301 + 12.1 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -1071 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr13-495 chr13 76879497 76879741 + 12.1 0.000 TTS (NM_138444) TTS (NM_138444) 6786 NM_138444 115207 Hs.644125 NM_138444 ENSG00000178695 KCTD12 C13orf2|PFET1|PFETIN potassium channel tetramerization domain containing 12 protein-coding chrX-405 chrX 153088684 153088928 + 12.1 0.000 Intergenic Intergenic 16392 NM_032882 84968 Hs.533301 NM_032882 ENSG00000235961 PNMA6A MA6|PNMA6|PNMA6C PNMA family member 6A protein-coding chr5-781 chr5 126484369 126484613 + 12.1 0.000 exon (NM_001349541, exon 10 of 14) exon (NM_001349541, exon 10 of 14) 19341 NM_001146322 65983 Hs.363558 NM_023927 ENSG00000155324 GRAMD2B GRAMD3|NS3TP2 GRAM domain containing 2B protein-coding chr2-1472 chr2 55453983 55454227 + 12.1 0.000 Intergenic Intergenic -34249 NM_001254943 55704 Hs.292925 NM_018084 ENSG00000115355 CCDC88A APE|GIRDIN|GIV|GRDN|HkRP1|KIAA1212|PEHO|PEHOL coiled-coil domain containing 88A protein-coding chr5-435 chr5 160504422 160504666 + 12.1 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 19192 NR_029701 406938 NR_029701 ENSG00000283733 MIR146A MIRN146|MIRN146A|miR-146a|miRNA146A microRNA 146a ncRNA chr2-1277 chr2 86223345 86223589 + 12.1 0.000 intron (NM_001371279, intron 7 of 8) intron (NM_001371279, intron 7 of 8) 24010 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr4-700 chr4 57759634 57759878 + 12.1 0.000 Intergenic AluSz|SINE|Alu 333884 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr16-930 chr16 10503834 10504078 + 12.1 0.000 Intergenic AluSc8|SINE|Alu 24242 NR_149081 106144584 Hs.531561 NR_149081 ENSG00000260468 LINC01290 - long intergenic non-protein coding RNA 1290 ncRNA chr13-126 chr13 112713916 112714160 + 12.1 0.000 intron (NM_032189, intron 1 of 28) intron (NM_032189, intron 1 of 28) 23709 NM_032189 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr3-1476 chr3 180695619 180695863 + 12.1 0.000 Intergenic AluSq|SINE|Alu -16252 NM_181426 339829 Hs.712820 NM_181426 ENSG00000284862 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding chr10-738 chr10 73625616 73625860 + 12.1 0.000 intron (NM_001350995, intron 1 of 21) CpG 243 NM_001350995 159195 Hs.657355 NM_152586 ENSG00000166348 USP54 C10orf29|bA137L10.3|bA137L10.4 ubiquitin specific peptidase 54 protein-coding KZ208922.1-1 KZ208922.1 41978 42222 + 12.1 0.000 NA NA NA NA chr17-1455 chr17 81455091 81455335 + 12.1 0.000 intron (NM_001291324, intron 14 of 27) intron (NM_001291324, intron 14 of 27) -4025 NR_036152 100422944 NR_036152 ENSG00000266189 MIR3186 mir-3186 microRNA 3186 ncRNA chr8-380 chr8 23529539 23529783 + 12.1 0.000 intron (NM_001317812, intron 1 of 3) CpG 705 NM_001317813 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding chr19-828 chr19 46634160 46634404 + 12.1 0.000 intron (NM_033258, intron 1 of 1) intron (NM_033258, intron 1 of 1) 400 NM_033258 94235 Hs.283961 NM_033258 ENSG00000167414 GNG8 - G protein subunit gamma 8 protein-coding chr21-117 chr21 41817285 41817529 + 12.1 0.000 intron (NM_001040424, intron 18 of 23) intron (NM_001040424, intron 18 of 23) 45895 NR_104260 63977 Hs.473893 NM_022115 ENSG00000141956 PRDM15 C21orf83|PFM15|ZNF298 PR/SET domain 15 protein-coding chr17-497 chr17 47397991 47398235 + 12.1 0.000 intron (NM_001195192, intron 15 of 21) SVA_D|Retroposon|SVA 74158 NM_001195192 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding chr14-671 chr14 103126326 103126570 + 12.1 0.000 5' UTR (NM_001371221, exon 2 of 13) 5' UTR (NM_001371221, exon 2 of 13) 142 NM_006291 7127 Hs.525607 NM_006291 ENSG00000185215 TNFAIP2 B94|EXOC3L3 TNF alpha induced protein 2 protein-coding chr16-791 chr16 4674398 4674642 + 12.1 0.000 intron (NR_102267, intron 10 of 14) AluSg|SINE|Alu 3202 NR_106827 102466731 NR_106827 ENSG00000276641 MIR6769A hsa-mir-6769a microRNA 6769a ncRNA chr20-134 chr20 606689 606933 + 12.1 0.000 intron (NM_004609, intron 1 of 1) AluSx1|SINE|Alu 3455 NM_004609 6939 Hs.437 NM_004609 ENSG00000125878 TCF15 EC2|PARAXIS|bHLHa40 transcription factor 15 protein-coding chr8-961 chr8 128407942 128408186 + 12.1 0.000 intron (NR_121672, intron 6 of 7) MIRc|SINE|MIR 156615 NR_121672 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA chr9-889 chr9 69516440 69516684 + 12.1 0.000 exon (NM_001163, exon 2 of 13) exon (NM_001163, exon 2 of 13) 155809 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr20-654 chr20 62502182 62502426 + 12.1 0.000 Intergenic Intergenic -26309 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr15-602 chr15 89002660 89002904 + 12.1 0.000 Intergenic Intergenic -85674 NM_007011 11057 Hs.122337 NM_007011 ENSG00000140526 ABHD2 HS1-2|LABH2|PHPS1-2 abhydrolase domain containing 2 protein-coding chr18-180 chr18 36296599 36296843 + 12.1 0.000 promoter-TSS (NM_025135) promoter-TSS (NM_025135) -992 NM_025135 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr3-1413 chr3 135422445 135422689 + 12.1 0.000 Intergenic L1PA10|LINE|L1 -543161 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr8-870 chr8 51253351 51253595 + 12.1 0.000 Intergenic THE1C|LTR|ERVL-MaLR 555972 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr6-765 chr6 166925398 166925642 + 12.1 0.000 3' UTR (NM_003730, exon 9 of 9) 3' UTR (NM_003730, exon 9 of 9) 21822 NR_046644 100861523 Hs.634640 NR_046644 RPS6KA2-AS1 - RPS6KA2 antisense RNA 1 ncRNA chr2-1256 chr2 70070165 70070409 + 12.1 0.000 intron (NR_033872, intron 4 of 10) L1MEj|LINE|L1 16728 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA chr5-947 chr5 170791360 170791604 + 12.1 0.000 intron (NM_001291985, intron 3 of 8) intron (NM_001291985, intron 3 of 8) 7757 NM_014211 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding chr10-1178 chr10 70950768 70951012 + 12.1 0.000 intron (NR_134313, intron 1 of 2) intron (NR_134313, intron 1 of 2) 11837 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA chr17-663 chr17 81722526 81722770 + 12.1 0.000 Intergenic Intergenic 10364 NM_001270888 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr11-832 chr11 124069435 124069679 + 12.1 0.000 Intergenic LTR1|LTR|ERV1 -30556 NM_001004463 390265 Hs.553761 NM_001004463 ENSG00000182634 OR10G7 OR11-283 olfactory receptor family 10 subfamily G member 7 protein-coding chrX-474 chrX 65551490 65551734 + 12.1 0.000 non-coding (NR_033742, exon 1 of 1) non-coding (NR_033742, exon 1 of 1) 809 NR_033742 83957 Hs.652967 NR_033742 ENSG00000227942 FRMD8P1 - FERM domain containing 8 pseudogene 1 pseudo chr2-1900 chr2 198580771 198581015 + 12.1 0.000 Intergenic L1MB8|LINE|L1 -205796 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA chr16-874 chr16 85221304 85221548 + 12.1 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 13630 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr1-1334 chr1 47508085 47508329 + 12.1 0.000 Intergenic CpG -70890 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA chr3-1438 chr3 145663278 145663522 + 12.1 0.000 Intergenic L1PA16|LINE|L1 405785 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA chrX-396 chrX 120300502 120300746 + 12.1 0.000 intron (NM_001104544, intron 2 of 8) AluJb|SINE|Alu 10912 NM_017938 55026 Hs.437563 NM_017938 ENSG00000125355 TMEM255A FAM70A transmembrane protein 255A protein-coding chr2-1053 chr2 240372566 240372810 + 12.1 0.000 Intergenic Intergenic -62975 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr18-319 chr18 24397875 24398119 + 12.1 0.000 promoter-TSS (NM_080597) promoter-TSS (NM_080597) -173 NM_080597 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr17-924 chr17 4423722 4423966 + 12.1 0.000 Intergenic Intergenic -10096 NM_182538 201305 Hs.657543 NM_182538 ENSG00000182557 SPNS3 SLC62A3 sphingolipid transporter 3 (putative) protein-coding chr17-861 chr17 41865017 41865261 + 12.1 0.000 exon (NM_018143, exon 1 of 2) exon (NM_018143, exon 1 of 2) 284 NM_018143 55175 Hs.13268 NM_018143 ENSG00000178502 KLHL11 - kelch like family member 11 protein-coding chr19-1402 chr19 55146985 55147229 + 12.1 0.000 intron (NM_003283, intron 2 of 13) intron (NM_003283, intron 2 of 13) 2099 NM_001291774 7138 Hs.631558 NM_003283 ENSG00000105048 TNNT1 ANM|NEM5|STNT|TNT|TNTS troponin T1, slow skeletal type protein-coding chr11-727 chr11 60914467 60914711 + 12.1 0.000 intron (NM_024092, intron 1 of 3) CpG 431 NM_024092 79073 Hs.13662 NM_024092 ENSG00000110108 TMEM109 - transmembrane protein 109 protein-coding chr2-1151 chr2 208578339 208578583 + 12.1 0.000 intron (NR_136588, intron 2 of 5) AluSz|SINE|Alu 35819 NR_136588 101927960 Hs.159960 NR_136588 LOC101927960 - uncharacterized LOC101927960 ncRNA chrX-66 chrX 151324024 151324268 + 12.1 0.000 Intergenic Intergenic -72449 NM_001363810 203547 Hs.58633 NM_001017980 ENSG00000160131 VMA21 MEAX|XMEA vacuolar ATPase assembly factor VMA21 protein-coding chrX-360 chrX 15269813 15270057 + 12.1 0.000 5' UTR (NM_001168530, exon 1 of 7) 5' UTR (NM_001168530, exon 1 of 7) 148 NM_024087 140462 Hs.19404 NM_024087 ENSG00000102048 ASB9 - ankyrin repeat and SOCS box containing 9 protein-coding chr2-1236 chr2 47088501 47088745 + 12.1 0.000 intron (NM_001163561, intron 6 of 6) intron (NM_001163561, intron 6 of 6) 66685 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding chr17-1364 chr17 60742234 60742478 + 12.1 0.000 intron (NM_001330413, intron 5 of 25) intron (NM_001330413, intron 5 of 25) 64505 NM_001099432 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding chr11-1044 chr11 1250897 1251141 + 12.1 0.000 exon (NM_002458, exon 31 of 49) exon (NM_002458, exon 31 of 49) -1343 NR_157183 112577518 NR_157183 MUC5B-AS1 - MUC5B antisense RNA 1 ncRNA chr19-1280 chr19 48513746 48513990 + 12.1 0.000 promoter-TSS (NM_001080434) promoter-TSS (NM_001080434) -679 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding chr7-1450 chr7 155344902 155345146 + 11.9 0.000 Intergenic CpG 22909 NR_103545 338436 Hs.521326 NR_103545 ENSG00000204960 BLACE - B cell acute lymphoblastic leukemia expressed ncRNA chr11-1333 chr11 73121615 73121859 + 11.9 0.000 intron (NM_014824, intron 2 of 19) intron (NM_014824, intron 2 of 19) 20581 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding chr5-1118 chr5 135374323 135374567 + 11.9 0.000 intron (NM_138609, intron 2 of 8) intron (NM_138609, intron 2 of 8) 24793 NM_001040158 9555 Hs.420272 NM_004893 ENSG00000113648 H2AFY H2A.y|H2A/y|H2AF12M|MACROH2A1.1|mH2A1|macroH2A1.2 H2A histone family member Y protein-coding chr1-1479 chr1 8329442 8329686 + 11.9 0.000 intron (NM_001080397, intron 4 of 8) intron (NM_001080397, intron 4 of 8) 11479 NM_001080397 50651 Hs.463036 NM_001080397 ENSG00000162426 SLC45A1 DNB5|IDDNPF solute carrier family 45 member 1 protein-coding chr12-764 chr12 100294440 100294684 + 11.9 0.000 intron (NM_017988, intron 3 of 17) SVA_D|Retroposon|SVA 27178 NM_001330253 55681 Hs.506481 NM_017988 ENSG00000136021 SCYL2 CVAK104 SCY1 like pseudokinase 2 protein-coding chr2-139 chr2 241928040 241928284 + 11.9 0.000 intron (NR_110220, intron 2 of 3) intron (NR_110220, intron 2 of 3) -25539 NR_135766 285095 Hs.85890 NR_135766 ENSG00000216921 LOC285095 - uncharacterized LOC285095 ncRNA chr12-1086 chr12 45729443 45729687 + 11.9 0.000 promoter-TSS (NM_001347839) promoter-TSS (NM_001347839) -141 NM_152641 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding chr2-585 chr2 9378435 9378679 + 11.9 0.000 intron (NM_003887, intron 18 of 27) intron (NM_003887, intron 18 of 27) 44034 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding chr2-1321 chr2 154014484 154014728 + 11.9 0.000 intron (NM_052917, intron 3 of 12) (TGT)n|Simple_repeat|Simple_repeat 70212 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding chr1-1906 chr1 204516325 204516569 + 11.9 0.000 promoter-TSS (NM_001278519) promoter-TSS (NM_001278519) 41 NM_002393 4194 Hs.497492 NM_002393 ENSG00000198625 MDM4 HDMX|MDMX|MRP1 MDM4 regulator of p53 protein-coding chrX-346 chrX 153536939 153537183 + 11.9 0.000 intron (NM_001001344, intron 1 of 19) intron (NM_001001344, intron 1 of 19) 939 NM_001001344 492 Hs.533956 NM_021949 ENSG00000067842 ATP2B3 CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1 ATPase plasma membrane Ca2+ transporting 3 protein-coding chr2-1328 chr2 160367872 160368116 + 11.9 0.000 intron (NM_002897, intron 1 of 13) intron (NM_002897, intron 1 of 13) 39888 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA chr16-505 chr16 1999290 1999534 + 11.9 0.000 intron (NM_178167, intron 11 of 13) intron (NM_178167, intron 11 of 13) 9442 NM_004209 9143 Hs.435277 NM_004209 ENSG00000127561 SYNGR3 - synaptogyrin 3 protein-coding chr8-462 chr8 143357876 143358120 + 11.9 0.000 intron (NM_001258447, intron 1 of 13) AluJr|SINE|Alu 1979 NM_001258446 116447 Hs.528574 NM_052963 ENSG00000184428 TOP1MT - DNA topoisomerase I mitochondrial protein-coding chr4-278 chr4 176319759 176320003 + 11.9 0.000 promoter-TSS (NM_021928) promoter-TSS (NM_021928) -85 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding chr16-684 chr16 89011345 89011589 + 11.9 0.000 Intergenic (CCAT)n|Simple_repeat|Simple_repeat -34260 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding chr3-1480 chr3 183698883 183699127 + 11.9 0.000 intron (NM_001351371, intron 1 of 21) L2|LINE|L2 1187 NM_001351370 55689 Hs.632575 NM_018023 ENSG00000163872 YEATS2 - YEATS domain containing 2 protein-coding chr3-1333 chr3 65356825 65357069 + 11.9 0.000 exon (NM_001033057, exon 23 of 23) exon (NM_001033057, exon 23 of 23) -536869 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA chr6-852 chr6 133071659 133071903 + 11.9 0.000 Intergenic Intergenic -16299 NR_026969 285735 Hs.407549 NM_001037231 LINC00326 NCRNA00326 long intergenic non-protein coding RNA 326 ncRNA chr14-419 chr14 64900899 64901143 + 11.9 0.000 Intergenic AluSx|SINE|Alu -13340 NM_145165 91612 Hs.731537 NM_145165 ENSG00000258289 CHURC1 C14orf52|My015|chch churchill domain containing 1 protein-coding chr11-1465 chr11 44301125 44301369 + 11.9 0.000 intron (NM_021926, intron 1 of 3) intron (NM_021926, intron 1 of 3) 8892 NM_021926 60529 Hs.436055 NM_021926 ENSG00000052850 ALX4 CRS5|FND2 ALX homeobox 4 protein-coding chr7-1349 chr7 100372899 100373143 + 11.9 0.000 promoter-TSS (NM_013439) promoter-TSS (NM_013439) -466 NM_178272 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr16-1212 chr16 85918365 85918609 + 11.9 0.000 TTS (NR_106832) TTS (NR_106832) 140 NR_106832 102466732 NR_106832 ENSG00000274134 MIR6774 hsa-mir-6774 microRNA 6774 ncRNA chr8-501 chr8 72251600 72251844 + 11.9 0.000 promoter-TSS (NR_033867) promoter-TSS (NR_033867) -88 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo chr13-271 chr13 111219506 111219750 + 11.9 0.000 intron (NM_001330597, intron 5 of 18) L1MB3|LINE|L1 16568 NM_001320853 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding chr8-980 chr8 140092972 140093216 + 11.9 0.000 intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 7441 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA chr19-1268 chr19 45712809 45713053 + 11.9 0.000 exon (NM_001329633, exon 2 of 2) exon (NM_001329633, exon 2 of 2) 2347 NM_001329632 23403 Hs.128702 NM_001080469 ENSG00000177051 FBXO46 20D7-FC4|FBXO34L|Fbx46 F-box protein 46 protein-coding chr4-972 chr4 52051832 52052076 + 11.9 0.000 intron (NM_001346103, intron 1 of 8) CpG 650 NM_145263 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding chr7-768 chr7 100384446 100384690 + 11.9 0.000 intron (NM_178273, intron 2 of 4) AluSx3|SINE|Alu 11081 NM_013439 29992 Hs.444407 NM_013439 ENSG00000085514 PILRA FDF03 paired immunoglobin like type 2 receptor alpha protein-coding chr12-510 chr12 13317921 13318165 + 11.9 0.000 Intergenic AluSx|SINE|Alu 58702 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA chr16-1053 chr16 3597287 3597531 + 11.9 0.000 exon (NM_032444, exon 7 of 15) exon (NM_032444, exon 7 of 15) 14197 NM_032444 84464 Hs.143681 NM_032444 ENSG00000188827 SLX4 BTBD12|FANCP|MUS312 SLX4 structure-specific endonuclease subunit protein-coding chr7-422 chr7 74658387 74658631 + 11.9 0.000 intron (NM_001163636, intron 1 of 33) CpG 791 NM_001518 2969 Hs.647041 NM_001518 ENSG00000263001 GTF2I BAP135|BTKAP1|DIWS|GTFII-I|IB291|SPIN|TFII-I|WBS|WBSCR6 general transcription factor IIi protein-coding chr16-575 chr16 10942302 10942546 + 11.9 0.000 promoter-TSS (NM_014015) promoter-TSS (NM_014015) 44 NM_014015 28955 Hs.592051 NM_014015 ENSG00000182108 DEXI MYLE Dexi homolog protein-coding chr12-1072 chr12 26833392 26833636 + 11.9 0.000 promoter-TSS (NM_002223) promoter-TSS (NM_002223) -320 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding chr3-1402 chr3 129183452 129183696 + 11.9 0.000 intron (NM_001127196, intron 1 of 4) CpG 322 NM_003418 7555 Hs.518249 NM_003418 ENSG00000169714 CNBP CNBP1|DM2|PROMM|RNF163|ZCCHC22|ZNF9 CCHC-type zinc finger nucleic acid binding protein protein-coding chr7-458 chr7 44306711 44306955 + 11.9 0.000 intron (NM_172081, intron 1 of 18) intron (NM_172081, intron 1 of 18) 18761 NM_172080 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr2-1547 chr2 202807478 202807722 + 11.9 0.000 intron (NM_001288623, intron 9 of 12) L1M1|LINE|L1 21634 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding chr16-652 chr16 62097999 62098243 + 11.9 0.000 Intergenic Intergenic -61683 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding chr3-644 chr3 10164804 10165048 + 11.9 0.000 promoter-TSS (NM_001570) promoter-TSS (NM_001570) 7 NM_001570 3656 Hs.449207 NM_001570 ENSG00000134070 IRAK2 IRAK-2 interleukin 1 receptor associated kinase 2 protein-coding chr14-384 chr14 101964473 101964717 + 11.9 0.000 promoter-TSS (NM_001376) promoter-TSS (NM_001376) 22 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr1-1582 chr1 211323434 211323678 + 11.9 0.000 Intergenic Intergenic -3059 NM_004619 7188 Hs.523930 NM_004619 ENSG00000082512 TRAF5 MGC:39780|RNF84 TNF receptor associated factor 5 protein-coding chr17-810 chr17 78717283 78717527 + 11.9 0.000 promoter-TSS (NM_001292019) promoter-TSS (NM_001292019) -373 NM_001292019 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr17-171 chr17 28743813 28744057 + 11.9 0.000 promoter-TSS (NM_004295) promoter-TSS (NM_004295) -76 NM_004295 9618 Hs.8375 NM_004295 ENSG00000076604 TRAF4 CART1|MLN62|RNF83 TNF receptor associated factor 4 protein-coding chr14-490 chr14 89435307 89435551 + 11.9 0.000 intron (NM_001085471, intron 1 of 6) intron (NM_001085471, intron 1 of 6) 18075 NR_036500 400236 Hs.585207 NR_036500 ENSG00000258920 FOXN3-AS1 - FOXN3 antisense RNA 1 ncRNA chr10-1207 chr10 79602495 79602739 + 11.9 0.000 Intergenic Intergenic -8322 NM_005411 653509 Hs.535295 NM_005411 ENSG00000122852 SFTPA1 COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 surfactant protein A1 protein-coding chr11-1452 chr11 35030758 35031002 + 11.9 0.000 Intergenic Intergenic 89043 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA chr14-631 chr14 60917498 60917742 + 11.9 0.000 intron (NM_001177963, intron 6 of 6) AluSz|SINE|Alu 63459 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding chr9-653 chr9 65458669 65458913 + 11.9 0.000 Intergenic Intergenic -173582 NM_001126334 653427 Hs.714683 NM_001126334 ENSG00000204779 FOXD4L5 bA15J10.2 forkhead box D4 like 5 protein-coding chr14-354 chr14 23346772 23347016 + 11.9 0.000 exon (NM_016609, exon 10 of 10) exon (NM_016609, exon 10 of 10) 5557 NM_020372 51310 Hs.373498 NM_016609 ENSG00000092096 SLC22A17 24p3R|BOCT|BOIT|NGALR|NGALR2|NGALR3|hBOIT solute carrier family 22 member 17 protein-coding chr19-1593 chr19 37466478 37466722 + 11.9 0.000 intron (NM_152484, intron 1 of 5) AluSp|SINE|Alu 844 NM_152484 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding chr1-2188 chr1 3169261 3169505 + 11.9 0.000 intron (NM_022114, intron 1 of 16) intron (NM_022114, intron 1 of 16) 41408 NR_036215 100422968 NR_036215 ENSG00000283572 MIR4251 - microRNA 4251 ncRNA chr6-316 chr6 70413228 70413472 + 11.9 0.000 promoter-TSS (NM_001351607) promoter-TSS (NM_001351607) -54 NM_020819 57579 Hs.211700 NM_020819 ENSG00000082269 FAM135A KIAA1411 family with sequence similarity 135 member A protein-coding chr8-556 chr8 38070584 38070828 + 11.9 0.000 Intergenic AluSx1|SINE|Alu -34787 NM_001282272 9070 Hs.521530 NM_004674 ENSG00000129691 ASH2L ASH2|ASH2L1|ASH2L2|Bre2 ASH2 like, histone lysine methyltransferase complex subunit protein-coding chr7-1437 chr7 143240175 143240419 + 11.9 0.000 intron (NM_001130026, intron 8 of 10) intron (NM_001130026, intron 8 of 10) 18260 NM_176882 259286 Hs.352241 NM_176882 ENSG00000221937 TAS2R40 GPR60|T2R40|T2R58 taste 2 receptor member 40 protein-coding chr6-645 chr6 3013514 3013758 + 11.9 0.000 intron (NM_001290222, intron 4 of 5) intron (NM_001290222, intron 4 of 5) 10254 NR_033884 401233 Hs.441039 NM_001013680 HTATSF1P2 - HIV-1 Tat specific factor 1 pseudogene 2 pseudo chr14-575 chr14 91016728 91016972 + 11.9 0.000 intron (NM_182398, intron 1 of 12) ERVL-B4-int|LTR|ERVL 43274 NM_001322238 9252 Hs.510225 NM_004755 ENSG00000100784 RPS6KA5 MSK1|MSPK1|RLPK ribosomal protein S6 kinase A5 protein-coding chr19-1588 chr19 35776157 35776401 + 11.9 0.000 intron (NM_001172630, intron 1 of 20) intron (NM_001172630, intron 1 of 20) 715 NM_001366178 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr2-1390 chr2 229742899 229743143 + 11.9 0.000 Intergenic SVA_D|Retroposon|SVA -28466 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding chr5-1193 chr5 177610277 177610521 + 11.9 0.000 TTS (NM_007255) TTS (NM_007255) 10267 NM_007255 11285 Hs.455109 NM_007255 ENSG00000027847 B4GALT7 EDSP1|EDSSLA|EDSSPD1|XGALT1|XGPT|XGPT1 beta-1,4-galactosyltransferase 7 protein-coding chr17-1034 chr17 74960166 74960410 + 11.9 0.000 intron (NM_030630, intron 6 of 18) intron (NM_030630, intron 6 of 18) -10401 NR_110878 102723641 NR_110878 ENSG00000263586 HID1-AS1 - HID1 antisense RNA 1 ncRNA chr15-429 chr15 63503143 63503387 + 11.9 0.000 Intergenic Intergenic -1246 NM_001256702 9960 Hs.458499 NM_006537 ENSG00000140455 USP3 SIH003|UBP ubiquitin specific peptidase 3 protein-coding chr2-1631 chr2 24454312 24454556 + 11.9 0.000 Intergenic Intergenic -36820 NM_003743 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding chr4-574 chr4 894127 894371 + 11.9 0.000 intron (NM_005255, intron 7 of 27) CpG-20767 38067 NM_005255 2580 Hs.369607 NM_005255 ENSG00000178950 GAK DNAJ26|DNAJC26 cyclin G associated kinase protein-coding chr8-581 chr8 125664418 125664662 + 11.9 0.000 Intergenic Intergenic 232331 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chr3-1410 chr3 133895677 133895921 + 11.9 0.000 promoter-TSS (NM_016577) promoter-TSS (NM_016577) 48 NM_001363953 51560 Hs.715344 NM_016577 ENSG00000154917 RAB6B - RAB6B, member RAS oncogene family protein-coding chr14-365 chr14 60248450 60248694 + 11.9 0.000 promoter-TSS (NM_177951) promoter-TSS (NM_177951) -649 NM_021003 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding chr5-1173 chr5 171483814 171484058 + 11.9 0.000 Intergenic Intergenic 64289 NM_003862 8817 Hs.87191 NM_003862 ENSG00000156427 FGF18 FGF-18|ZFGF5 fibroblast growth factor 18 protein-coding chrX-298 chrX 52040348 52040592 + 11.9 0.000 Intergenic L1M1|LINE|L1 23003 NR_003711 100124541 Hs.709779 NR_003711 ENSG00000221475 SNORA11D - small nucleolar RNA, H/ACA box 11D snoRNA chr1-2309 chr1 27394135 27394379 + 11.9 0.000 exon (NM_005281, exon 2 of 2) exon (NM_005281, exon 2 of 2) 1635 NM_005281 2827 Hs.66542 NM_005281 ENSG00000181773 GPR3 ACCA G protein-coupled receptor 3 protein-coding chrX-275 chrX 3800299 3800543 + 11.9 0.000 Intergenic L1MB7|LINE|L1 43473 NR_034031 389906 Hs.636199 NM_001045547 LOC389906 - zinc finger protein 839 pseudogene pseudo chr1-2604 chr1 201916694 201916938 + 11.9 0.000 intron (NM_012134, intron 1 of 2) intron (NM_012134, intron 1 of 2) 28139 NM_198149 149345 Hs.632471 NM_198149 ENSG00000198892 SHISA4 C1orf40|TMEM58 shisa family member 4 protein-coding chr20-576 chr20 32709694 32709938 + 11.9 0.000 intron (NM_001099339, intron 3 of 8) L2a|LINE|L2 34192 NM_001099339 149951 Hs.408427 NM_053041 ENSG00000149600 COMMD7 C20orf92|dJ1085F17.3 COMM domain containing 7 protein-coding chr2-1292 chr2 109130419 109130663 + 11.9 0.000 promoter-TSS (NR_029193) promoter-TSS (NR_029193) -422 NR_029193 100287216 Hs.171244 NR_029193 SH3RF3-AS1 - SH3RF3 antisense RNA 1 ncRNA chr2-1484 chr2 74415733 74415977 + 11.9 0.000 exon (NM_001145054, exon 3 of 4) exon (NM_001145054, exon 3 of 4) 1862 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding chr6-885 chr6 1390793 1391037 + 11.9 0.000 promoter-TSS (NR_106778) promoter-TSS (NR_106778) -504 NR_106778 102466720 NR_106778 ENSG00000275859 MIR6720 hsa-mir-6720|mir-6720 microRNA 6720 ncRNA chr11-848 chr11 1369048 1369292 + 11.8 0.000 Intergenic Intergenic -20764 NM_001256629 9024 Hs.170819 NM_003957 ENSG00000174672 BRSK2 C11orf7|PEN11B|SAD1|SADA|STK29 BR serine/threonine kinase 2 protein-coding chr20-540 chr20 16061671 16061915 + 11.8 0.000 Intergenic Intergenic -75911 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr10-859 chr10 71975919 71976163 + 11.8 0.000 intron (NM_004273, intron 1 of 2) intron (NM_004273, intron 1 of 2) 11646 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr3-1271 chr3 48404933 48405177 + 11.8 0.000 intron (NM_002673, intron 37 of 37) intron (NM_002673, intron 37 of 37) 24408 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding chr13-394 chr13 62518295 62518539 + 11.8 0.000 Intergenic AluSx|SINE|Alu 194760 NR_047038 100874180 Hs.7415 NR_047038 ENSG00000229307 LINC00459 - long intergenic non-protein coding RNA 459 ncRNA chr2-1894 chr2 195992122 195992366 + 11.8 0.000 intron (NM_018897, intron 12 of 64) intron (NM_018897, intron 12 of 64) 76593 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding chr19-1192 chr19 11115689 11115933 + 11.8 0.000 intron (NM_001195803, intron 9 of 15) AluSx1|SINE|Alu 2337 NR_106946 102465534 NR_106946 ENSG00000284553 MIR6886 hsa-mir-6886 microRNA 6886 ncRNA chr2-332 chr2 1744008 1744252 + 11.8 0.000 intron (NM_012293, intron 1 of 22) CpG 385 NM_012293 7837 Hs.332197 NM_012293 ENSG00000130508 PXDN ASGD7|COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO peroxidasin protein-coding chr4-900 chr4 2943200 2943444 + 11.8 0.000 intron (NM_001291979, intron 13 of 16) intron (NM_001291979, intron 13 of 16) 7776 NR_015453 317648 Hs.398178 NR_015453 ENSG00000249673 NOP14-AS1 C4orf10|RES4-24 NOP14 antisense RNA 1 ncRNA chr13-478 chr13 59167590 59167834 + 11.8 0.000 Intergenic MER50|LTR|ERV1 -845006 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA chr12-530 chr12 64523907 64524151 + 11.8 0.000 Intergenic Intergenic 71909 NM_013254 29110 Hs.505874 NM_013254 ENSG00000183735 TBK1 FTDALS4|IIAE8|NAK|T2K TANK binding kinase 1 protein-coding chr12-595 chr12 116910966 116911210 + 11.8 0.000 exon (NM_012174, exon 1 of 11) exon (NM_012174, exon 1 of 11) 132 NM_012174 26259 Hs.624537 NM_012174 ENSG00000174989 FBXW8 FBW6|FBW8|FBX29|FBXO29|FBXW6 F-box and WD repeat domain containing 8 protein-coding chr10-574 chr10 45000846 45001090 + 11.8 0.000 promoter-TSS (NR_126421) promoter-TSS (NR_126421) 45 NM_006963 7570 Hs.462693 NM_006963 ENSG00000165512 ZNF22 HKR-T1|KOX15|ZNF422|Zfp422 zinc finger protein 22 protein-coding chr11-874 chr11 34916444 34916688 + 11.8 0.000 promoter-TSS (NM_003477) promoter-TSS (NM_003477) -52 NM_003477 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding chr17-1337 chr17 50524527 50524771 + 11.8 0.000 intron (NM_001366294, intron 12 of 18) intron (NM_001366294, intron 12 of 18) -8086 NM_017957 55040 Hs.670090 NM_017957 ENSG00000049283 EPN3 - epsin 3 protein-coding chr7-1290 chr7 47448224 47448468 + 11.8 0.000 intron (NM_022748, intron 4 of 30) intron (NM_022748, intron 4 of 30) 16457 NR_145813 109623468 NR_145813 SNORD151 - small nucleolar RNA, C/D box 151 snoRNA chr6-745 chr6 149926125 149926369 + 11.8 0.000 Intergenic Intergenic -3126 NR_130110 353091 Hs.535023 NM_001001788 ENSG00000203722 RAET1G ULBP5 retinoic acid early transcript 1G protein-coding chrX-214 chrX 107571619 107571863 + 11.8 0.000 intron (NM_032428, intron 13 of 15) intron (NM_032428, intron 13 of 15) -25920 NR_046750 100874122 Hs.600967 NR_046750 ENSG00000227610 FRMPD3-AS1 - FRMPD3 antisense RNA 1 ncRNA chr11-1668 chr11 125950130 125950374 + 11.8 0.000 exon (NM_001365077, exon 4 of 12) exon (NM_001365077, exon 4 of 12) 4196 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding chr17-1303 chr17 40556803 40557047 + 11.8 0.000 intron (NM_001301714, intron 1 of 1) intron (NM_001301714, intron 1 of 1) 3469 NM_001301718 1236 Hs.370036 NM_001838 ENSG00000126353 CCR7 BLR2|CC-CKR-7|CCR-7|CD197|CDw197|CMKBR7|EBI1 C-C motif chemokine receptor 7 protein-coding chr4-908 chr4 6329602 6329846 + 11.8 0.000 intron (NM_001206994, intron 8 of 9) intron (NM_001206994, intron 8 of 9) 52144 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chrX-551 chrX 133746942 133747186 + 11.8 0.000 intron (NM_001164617, intron 3 of 8) intron (NM_001164617, intron 3 of 8) -150379 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA KQ759759.1-2 KQ759759.1 84174 84418 + 11.8 0.000 NA NA NA NA chr12-945 chr12 31926488 31926732 + 11.8 0.000 Intergenic AluY|SINE|Alu -32805 NM_018169 55196 Hs.445129 NM_018169 ENSG00000174718 RESF1 C12orf35|GET|KIAA1551|UTA2-1 retroelement silencing factor 1 protein-coding chr1-1438 chr1 211577707 211577951 + 11.8 0.000 intron (NM_021194, intron 1 of 1) CpG 1332 NM_021194 7779 Hs.519469 NM_021194 ENSG00000170385 SLC30A1 ZNT1|ZRC1 solute carrier family 30 member 1 protein-coding chr16-1170 chr16 70754695 70754939 + 11.8 0.000 promoter-TSS (NR_034083) promoter-TSS (NR_034083) -278 NR_034083 100130894 Hs.678899 NR_034083 ENSG00000214353 VAC14-AS1 - VAC14 antisense RNA 1 ncRNA chr2-673 chr2 64653918 64654162 + 11.8 0.000 promoter-TSS (NM_014755) promoter-TSS (NM_014755) -127 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding chr22-497 chr22 37739169 37739413 + 11.8 0.000 intron (NM_001039141, intron 10 of 23) intron (NM_001039141, intron 10 of 23) 6653 NR_160696 102724378 NR_160696 LOC102724378 - uncharacterized LOC102724378 ncRNA chr7-644 chr7 98479813 98480057 + 11.8 0.000 Intergenic AluSx1|SINE|Alu -78845 NM_018842 55971 Hs.656063 NM_018842 ENSG00000006453 BAIAP2L1 IRTKS BAI1 associated protein 2 like 1 protein-coding chr3-667 chr3 123307869 123308113 + 11.8 0.000 intron (NM_183357, intron 12 of 20) intron (NM_183357, intron 12 of 20) 106048 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr2-1722 chr2 66863213 66863457 + 11.8 0.000 Intergenic Intergenic -41101 NR_110169 101060019 Hs.116425 NR_110169 ENSG00000230525 LINC01799 - long intergenic non-protein coding RNA 1799 ncRNA chr17-1360 chr17 60079298 60079542 + 11.8 0.000 promoter-TSS (NM_022070) promoter-TSS (NM_022070) 111 NR_135648 105371849 Hs.621935 NR_135648 ENSG00000267416 LOC105371849 - uncharacterized LOC105371849 ncRNA chr3-1246 chr3 37998561 37998805 + 11.8 0.000 intron (NM_015873, intron 8 of 18) intron (NM_015873, intron 8 of 18) 4545 NM_001370264 50853 Hs.103665 NM_015873 ENSG00000136059 VILL - villin like protein-coding chrX-508 chrX 103356224 103356468 + 11.8 0.000 promoter-TSS (NM_016303) promoter-TSS (NM_016303) -160 NM_016303 51186 Hs.533287 NM_016303 ENSG00000185222 TCEAL9 WBP5|WEX6 transcription elongation factor A like 9 protein-coding chr4-1097 chr4 165207253 165207497 + 11.8 0.000 promoter-TSS (NM_007246) promoter-TSS (NM_007246) -186 NM_007246 11275 Hs.388668 NM_007246 ENSG00000109466 KLHL2 ABP-KELCH|MAV|MAYVEN kelch like family member 2 protein-coding chr9-1405 chr9 136229447 136229691 + 11.8 0.000 intron (NM_181701, intron 1 of 11) intron (NM_181701, intron 1 of 11) 16272 NM_181701 169714 Hs.144073 NM_181701 ENSG00000165661 QSOX2 QSCN6L1|SOXN quiescin sulfhydryl oxidase 2 protein-coding chr20-36 chr20 61331468 61331712 + 11.8 0.000 intron (NM_001794, intron 2 of 15) intron (NM_001794, intron 2 of 15) 79329 NM_001794 1002 Hs.473231 NM_001794 ENSG00000179242 CDH4 CAD4|R-CAD|RCAD cadherin 4 protein-coding chr21-186 chr21 44985050 44985294 + 11.8 0.000 Intergenic Intergenic 8914 NR_033840 727699 Hs.397403 NR_033840 ENSG00000234880 LINC00163 C21orf134|NCRNA00163|NLC1-A|NLC1A long intergenic non-protein coding RNA 163 ncRNA chr19-1525 chr19 13004595 13004839 + 11.8 0.000 intron (NM_001365902, intron 1 of 10) intron (NM_001365902, intron 1 of 10) 9242 NM_002501 4784 Hs.257970 NM_002501 ENSG00000008441 NFIX CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 nuclear factor I X protein-coding chr11-1620 chr11 94238365 94238609 + 11.8 0.000 Intergenic L1PA2|LINE|L1 -67150 NM_001199206 390243 Hs.553758 NM_001080486 ENSG00000183560 IZUMO1R FOLR4|Folbp3|JUNO IZUMO1 receptor, JUNO protein-coding chr13-147 chr13 98142927 98143171 + 11.8 0.000 promoter-TSS (NM_001001715) promoter-TSS (NM_001001715) -45 NM_001001715 10160 Hs.403917 NM_005766 ENSG00000152767 FARP1 CDEP|FARP1-IT1|PLEKHC2|PPP1R75 FERM, ARH/RhoGEF and pleckstrin domain protein 1 protein-coding chr22-694 chr22 39177287 39177531 + 11.8 0.000 Intergenic Intergenic -24729 NM_001346744 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr8-816 chr8 22227495 22227739 + 11.8 0.000 intron (NM_001363311, intron 3 of 6) intron (NM_001363311, intron 3 of 6) 4482 NM_014759 9796 Hs.334688 NM_014759 ENSG00000168490 PHYHIP DYRK1AP3|PAHX-AP|PAHXAP1 phytanoyl-CoA 2-hydroxylase interacting protein protein-coding chr5-1166 chr5 163571804 163572048 + 11.8 0.000 Intergenic Intergenic 66307 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding chr10-1050 chr10 120051962 120052206 + 11.8 0.000 Intergenic AluJr|SINE|Alu 93571 NR_039830 100616322 NR_039830 ENSG00000265370 MIR4682 - microRNA 4682 ncRNA chr2-1598 chr2 6865808 6866052 + 11.8 0.000 promoter-TSS (NM_207315) promoter-TSS (NM_207315) -111 NM_001256478 129607 Hs.7155 NM_207315 ENSG00000134326 CMPK2 NDK|TMPK2|TYKi|UMP-CMPK2 cytidine/uridine monophosphate kinase 2 protein-coding chr8-196 chr8 70402863 70403107 + 11.8 0.000 intron (NM_001321703, intron 1 of 22) CpG 405 NM_001321707 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding chr20-341 chr20 49747496 49747740 + 11.8 0.000 Intergenic MIR|SINE|MIR -33740 NM_004776 9334 Hs.370487 NM_004776 ENSG00000158470 B4GALT5 B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V beta-1,4-galactosyltransferase 5 protein-coding chr2-1141 chr2 181649117 181649361 + 11.8 0.000 intron (NR_027690, intron 1 of 11) L1MA6|LINE|L1 7866 NM_201548 375298 Hs.732358 NM_201548 ENSG00000188452 CERKL RP26 ceramide kinase like protein-coding chr16-1162 chr16 68725418 68725662 + 11.8 0.000 Intergenic AluY|SINE|Alu -11752 NM_001317186 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding chr19-1256 chr19 43477573 43477817 + 11.8 0.000 intron (NM_198850, intron 15 of 15) AluSg|SINE|Alu -12087 NM_014400 27076 Hs.631594 NM_014400 ENSG00000124466 LYPD3 C4.4A LY6/PLAUR domain containing 3 protein-coding chr4-339 chr4 115927544 115927788 + 11.8 0.000 Intergenic Intergenic -372059 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA chr16-698 chr16 1474954 1475198 + 11.8 0.000 promoter-TSS (NM_001114331) promoter-TSS (NM_001114331) 8 NM_001114331 1186 Hs.459649 NM_001287 ENSG00000103249 CLCN7 CLC-7|CLC7|OPTA2|OPTB4|PPP1R63 chloride voltage-gated channel 7 protein-coding chr2-1873 chr2 177943843 177944087 + 11.8 0.000 intron (NM_001077197, intron 3 of 20) L1MB2|LINE|L1 -21128 NM_001077358 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr22-524 chr22 44816653 44816897 + 11.8 0.000 intron (NM_181335, intron 5 of 11) AluJo|SINE|Alu 64217 NM_181335 23779 Hs.102336 NM_181335 ENSG00000241484 ARHGAP8 BPGAP1|PP610 Rho GTPase activating protein 8 protein-coding chr7-1102 chr7 47651437 47651681 + 11.8 0.000 Intergenic Intergenic -3685 NM_001123065 401335 Hs.520816 NM_001123065 C7orf65 - chromosome 7 open reading frame 65 protein-coding chr4-937 chr4 30946596 30946840 + 11.8 0.000 intron (NM_001173523, intron 2 of 2) (TG)n|Simple_repeat|Simple_repeat -224426 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA chr3-1168 chr3 153210276 153210520 + 11.8 0.000 Intergenic Intergenic 48172 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding chr19-1472 chr19 5023844 5024088 + 11.8 0.000 intron (NM_001370094, intron 2 of 10) AluJr|SINE|Alu 54853 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr7-1108 chr7 57493391 57493635 + 11.8 0.000 Intergenic Intergenic 43336 NM_001159279 441234 Hs.533121 NM_001159279 ENSG00000182111 ZNF716 - zinc finger protein 716 protein-coding chr17-1262 chr17 18697813 18698057 + 11.8 0.000 promoter-TSS (NM_001353226) promoter-TSS (NM_001353226) -63 NM_001353221 147166 Hs.164324 NM_001037330 ENSG00000108448 TRIM16L TRIM70 tripartite motif containing 16 like protein-coding chr7-1321 chr7 75809973 75810217 + 11.8 0.000 TTS (NM_002991) TTS (NM_002991) 3711 NM_002991 6369 Hs.247838 NM_002991 ENSG00000106178 CCL24 Ckb-6|MPIF-2|MPIF2|SCYA24 C-C motif chemokine ligand 24 protein-coding chr7-1003 chr7 101185261 101185505 + 11.8 0.000 Intergenic MIRb|SINE|MIR -5090 NM_001369694 375607 Hs.213044 NM_198571 ENSG00000167011 NAT16 C7orf52 N-acetyltransferase 16 (putative) protein-coding chr7-514 chr7 51319722 51319966 + 11.8 0.000 Intergenic Intergenic -2983 NM_001287436 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr7-1274 chr7 44252568 44252812 + 11.8 0.000 intron (NM_172081, intron 5 of 18) intron (NM_172081, intron 5 of 18) 51712 NM_006555 10652 Hs.520794 NM_006555 ENSG00000106636 YKT6 - YKT6 v-SNARE homolog protein-coding chr5-1192 chr5 177553161 177553405 + 11.8 0.000 5' UTR (NM_001366499, exon 1 of 11) 5' UTR (NM_001366499, exon 1 of 11) 812 NM_001366500 54540 Hs.484289 NM_019057 ENSG00000146067 FAM193B IRIZIO family with sequence similarity 193 member B protein-coding chr3-1498 chr3 194486085 194486329 + 11.8 0.000 promoter-TSS (NR_033929) promoter-TSS (NR_033929) 795 NM_001367549 79572 Hs.529609 NM_024524 ENSG00000133657 ATP13A3 AFURS1 ATPase 13A3 protein-coding chr1-2321 chr1 31575655 31575899 + 11.8 0.000 promoter-TSS (NM_022164) promoter-TSS (NM_022164) -708 NM_001204414 64129 Hs.199368 NM_022164 ENSG00000142910 TINAGL1 ARG1|LCN7|LIECG3|TINAGRP tubulointerstitial nephritis antigen like 1 protein-coding chr17-1002 chr17 50931746 50931990 + 11.8 0.000 Intergenic Intergenic -63890 NM_001243877 10140 Hs.703321 NM_005749 ENSG00000141232 TOB1 APRO5|APRO6|PIG49|TOB|TROB|TROB1 transducer of ERBB2, 1 protein-coding chr1-2514 chr1 154272758 154273002 + 11.8 0.000 intron (NM_001018837, intron 1 of 6) intron (NM_001018837, intron 1 of 6) 251 NM_001018837 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding chr7-1162 chr7 151276071 151276315 + 11.8 0.000 intron (NM_003078, intron 1 of 13) intron (NM_003078, intron 1 of 13) 541 NM_001003802 6604 Hs.647067 NM_003078 ENSG00000082014 SMARCD3 BAF60C|CRACD3|Rsc6p SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 protein-coding chr6-828 chr6 89545207 89545451 + 11.8 0.000 intron (NM_001242809, intron 1 of 15) ERV3-16A3_I-int|LTR|ERVL -16989 NM_001242811 22881 Hs.702213 NM_014942 ENSG00000135299 ANKRD6 - ankyrin repeat domain 6 protein-coding chr14-796 chr14 103472879 103473123 + 11.8 0.000 intron (NM_001128920, intron 12 of 15) AluSc|SINE|Alu 49829 NM_001823 1152 Hs.173724 NM_001823 ENSG00000166165 CKB B-CK|BCK|CKBB|CPK-B|HEL-211|HEL-S-29 creatine kinase B protein-coding chr19-1493 chr19 7986948 7987192 + 11.8 0.000 intron (NM_001419, intron 2 of 5) intron (NM_001419, intron 2 of 5) 18571 NM_001419 1994 Hs.184492 NM_001419 ENSG00000066044 ELAVL1 ELAV1|HUR|Hua|MelG ELAV like RNA binding protein 1 protein-coding chr3-800 chr3 182979466 182979710 + 11.8 0.000 intron (NM_001308101, intron 1 of 6) intron (NM_001308101, intron 1 of 6) 950 NM_020640 54165 Hs.592789 NM_020640 ENSG00000043093 DCUN1D1 DCNL1|DCUN1L1|RP42|SCCRO|SCRO|Tes3 defective in cullin neddylation 1 domain containing 1 protein-coding chr9-401 chr9 133934879 133935123 + 11.8 0.000 intron (NM_001134398, intron 2 of 29) intron (NM_001134398, intron 2 of 29) 57323 NM_003371 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr17-1032 chr17 74347662 74347906 + 11.8 0.000 exon (NM_153209, exon 9 of 20) exon (NM_153209, exon 9 of 20) 14084 NM_001080466 388419 NM_001080466 ENSG00000204347 BTBD17 BTBD17A|LGALS3BPL|TANGO10A BTB domain containing 17 protein-coding chr10-700 chr10 132251431 132251675 + 11.8 0.000 intron (NM_001318878, intron 1 of 11) intron (NM_001318878, intron 1 of 11) -2445 NR_134911 282974 Hs.469002 NM_173575 ENSG00000165752 STK32C PKE|YANK3 serine/threonine kinase 32C protein-coding chr18-327 chr18 37446193 37446437 + 11.8 0.000 intron (NM_001353724, intron 2 of 12) intron (NM_001353724, intron 2 of 12) 20189 NR_132967 106635546 NR_132967 SNORA111 - small nucleolar RNA, H/ACA box 111 snoRNA chr8-651 chr8 85463322 85463566 + 11.8 0.000 promoter-TSS (NM_001293675) promoter-TSS (NM_001293675) -390 NR_121633 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA chr17-1189 chr17 81322353 81322597 + 11.8 0.000 Intergenic Intergenic -13227 NR_038080 284185 Hs.631762 NM_178519 LINC00482 C17orf55 long intergenic non-protein coding RNA 482 ncRNA chr13-451 chr13 39110607 39110851 + 11.6 0.000 Intergenic MLT2D|LTR|ERVL 72273 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr12-533 chr12 67925834 67926078 + 11.6 0.000 Intergenic Intergenic -3279 NR_120456 101927922 Hs.450769 NR_120456 ENSG00000255772 LINC01479 HRAT39 long intergenic non-protein coding RNA 1479 ncRNA chr4-764 chr4 161521757 161522001 + 11.6 0.000 intron (NM_020116, intron 10 of 15) intron (NM_020116, intron 10 of 15) -500854 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA chr2-1106 chr2 91852054 91852298 + 11.6 0.000 Intergenic SVA_F|Retroposon|SVA 76834 NR_003503 645367 Hs.650223 NR_003503 GGT8P GGT1P1 gamma-glutamyltransferase 8 pseudogene pseudo chr17-1058 chr17 79084761 79085005 + 11.6 0.000 intron (NM_001042573, intron 11 of 13) intron (NM_001042573, intron 11 of 13) 9946 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr12-373 chr12 68610611 68610855 + 11.6 0.000 promoter-TSS (NM_001251917) promoter-TSS (NM_001251917) -166 NM_015646 5908 Hs.369920 NM_015646 ENSG00000127314 RAP1B K-REV|RAL1B RAP1B, member of RAS oncogene family protein-coding chr12-370 chr12 53232976 53233220 + 11.6 0.000 promoter-TSS (NM_001243731) promoter-TSS (NM_001243731) -842 NM_001243730 5916 Hs.1497 NM_000966 ENSG00000172819 RARG NR1B3|RARC retinoic acid receptor gamma protein-coding chr1-2488 chr1 116200154 116200398 + 11.6 0.000 Intergenic Intergenic 88521 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr20-566 chr20 31557011 31557255 + 11.6 0.000 intron (NM_178580, intron 8 of 12) MIRb|SINE|MIR 16130 NR_046853 100874042 Hs.373741 NR_046853 ENSG00000230613 HM13-AS1 - HM13 antisense RNA 1 ncRNA chr3-815 chr3 9870981 9871225 + 11.6 0.000 intron (NM_001199551, intron 3 of 6) L1MB7|LINE|L1 7709 NM_001199623 63924 Hs.567562 NM_022094 ENSG00000187288 CIDEC CIDE-3|CIDE3|FPLD5|FSP27 cell death inducing DFFA like effector c protein-coding chr15-681 chr15 69668578 69668822 + 11.6 0.000 intron (NR_126437, intron 3 of 5) intron (NR_126437, intron 3 of 5) 76500 NR_126437 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA chr18-201 chr18 39012663 39012907 + 11.6 0.000 Intergenic AluJb|SINE|Alu 609390 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA chr8-545 chr8 20265746 20265990 + 11.6 0.000 intron (NM_021020, intron 1 of 3) intron (NM_021020, intron 1 of 3) 7667 NM_001362884 11178 Hs.521432 NM_021020 ENSG00000061337 LZTS1 F37|FEZ1 leucine zipper tumor suppressor 1 protein-coding chr10-1006 chr10 70475227 70475471 + 11.6 0.000 Intergenic Intergenic -3418 NM_014431 27143 Hs.202351 NM_014431 ENSG00000107719 PALD1 KIAA1274|PALD phosphatase domain containing paladin 1 protein-coding chr12-937 chr12 14774495 14774739 + 11.6 0.000 non-coding (NR_027716, exon 1 of 2) non-coding (NR_027716, exon 1 of 2) 281 NM_177925 55766 Hs.524280 NM_018267 ENSG00000246705 H2AFJ H2AJ H2A histone family member J protein-coding chr19-893 chr19 49724319 49724563 + 11.6 0.000 Intergenic MER41E|LTR|ERV1 33325 NR_108072 126129 Hs.112195 NM_152359 ENSG00000169169 CPT1C CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73 carnitine palmitoyltransferase 1C protein-coding chr1-1741 chr1 41529259 41529503 + 11.6 0.000 intron (NM_024503, intron 5 of 8) (CACCCT)n|Simple_repeat|Simple_repeat -44698 NM_001956 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding chr1-2243 chr1 15075760 15076004 + 11.6 0.000 intron (NM_201628, intron 8 of 14) intron (NM_201628, intron 8 of 14) 76582 NR_027136 200197 Hs.531424 NM_182534 ENSG00000175147 TMEM51-AS1 C1orf126 TMEM51 antisense RNA 1 ncRNA chr8-831 chr8 27634195 27634439 + 11.6 0.000 intron (NM_182826, intron 1 of 5) intron (NM_182826, intron 1 of 5) 257 NM_182826 51435 Hs.128856 NM_016240 ENSG00000168077 SCARA3 APC7|CSR|CSR1|MSLR1|MSRL1 scavenger receptor class A member 3 protein-coding chr14-474 chr14 58637870 58638114 + 11.6 0.000 promoter-TSS (NR_046095) promoter-TSS (NR_046095) 30 NM_001079520 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding chrX-375 chrX 54009805 54010049 + 11.6 0.000 intron (NM_001184898, intron 8 of 21) L1MD|LINE|L1 33220 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding chr2-1663 chr2 36018657 36018901 + 11.6 0.000 Intergenic Intergenic 336791 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA chr7-975 chr7 76248203 76248447 + 11.6 0.000 intron (NM_001110199, intron 3 of 14) intron (NM_001110199, intron 3 of 14) 46429 NM_001291831 222183 Hs.511025 NM_001039212 ENSG00000177679 SRRM3 - serine/arginine repetitive matrix 3 protein-coding chr6-1097 chr6 152369280 152369524 + 11.6 0.000 intron (NM_182961, intron 60 of 145) intron (NM_182961, intron 60 of 145) -11128 NR_120501 100505475 Hs.571203 NR_120501 SYNE1-AS1 - SYNE1 antisense RNA 1 ncRNA chr11-1561 chr11 68904699 68904943 + 11.6 0.000 promoter-TSS (NM_181514) promoter-TSS (NM_181514) 970 NM_002180 3508 Hs.503048 NM_002180 ENSG00000132740 IGHMBP2 CATF1|CMT2S|HCSA|HMN6|SMARD1|SMUBP2|ZFAND7 immunoglobulin mu DNA binding protein 2 protein-coding chr11-1072 chr11 18012509 18012753 + 11.6 0.000 intron (NR_104040, intron 1 of 11) CpG 416 NM_012139 26297 Hs.32470 NM_012139 ENSG00000129158 SERGEF DELGEF|Gnefr secretion regulating guanine nucleotide exchange factor protein-coding chr11-1418 chr11 10323128 10323372 + 11.6 0.000 intron (NR_103765, intron 1 of 3) intron (NR_103765, intron 1 of 3) 14937 NR_103765 100130460 Hs.501890 NR_103765 CAND1.11 - uncharacterized LOC100130460 ncRNA chr1-1591 chr1 228071892 228072136 + 11.6 0.000 Intergenic Intergenic 4536 NR_158166 100506571 NR_158166 LINC02809 - long intergenic non-protein coding RNA 2809 ncRNA chr8-399 chr8 67167295 67167539 + 11.6 0.000 intron (NM_001363133, intron 21 of 27) SVA_C|Retroposon|SVA 83569 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding chr2-1734 chr2 74499419 74499663 + 11.6 0.000 promoter-TSS (NM_001282430) promoter-TSS (NM_001282430) 62 NM_001282430 85474 Hs.516124 NM_001009812 ENSG00000179528 LBX2 LP3727 ladybird homeobox 2 protein-coding chrX-490 chrX 72027321 72027565 + 11.6 0.000 intron (NM_001013627, intron 1 of 7) intron (NM_001013627, intron 1 of 7) -16966 NR_002309 441502 Hs.449523 NR_002309 RPS26P11 RPS26L1|RPS26_22_1784|bA366E13.1 ribosomal protein S26 pseudogene 11 pseudo chr4-1098 chr4 167234398 167234642 + 11.6 0.000 promoter-TSS (NM_001204358) promoter-TSS (NM_001204358) -26 NM_001204358 50859 Hs.481133 NM_016950 ENSG00000196104 SPOCK3 HSAJ1454|TES-3|TICN3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 protein-coding chr6-1040 chr6 107957233 107957477 + 11.6 0.000 intron (NM_007214, intron 1 of 20) intron (NM_007214, intron 1 of 20) 853 NM_007214 11231 Hs.26904 NM_007214 ENSG00000025796 SEC63 DNAJC23|ERdj2|PCLD2|PRO2507|SEC63L SEC63 homolog, protein translocation regulator protein-coding chr14-491 chr14 91114129 91114373 + 11.6 0.000 promoter-TSS (NM_001102367) promoter-TSS (NM_001102367) 178 NM_001286473 80017 Hs.309849 NM_024952 ENSG00000133943 DGLUCY C14orf159 D-glutamate cyclase protein-coding chr17-540 chr17 2699398 2699642 + 11.6 0.000 intron (NM_001366662, intron 9 of 25) AluJb|SINE|Alu -6601 NR_106834 102465465 NR_106834 ENSG00000273606 MIR6776 hsa-mir-6776 microRNA 6776 ncRNA chr9-1270 chr9 99365705 99365949 + 11.6 0.000 intron (NR_102270, intron 6 of 9) intron (NR_102270, intron 6 of 9) 9430 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA chr7-1105 chr7 52717235 52717479 + 11.6 0.000 Intergenic AluSc|SINE|Alu -318276 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding chr2-1380 chr2 219472602 219472846 + 11.6 0.000 intron (NM_005876, intron 15 of 40) intron (NM_005876, intron 15 of 40) 11912 NM_001173476 10290 Hs.21639 NM_005876 ENSG00000072195 SPEG APEG-1|APEG1|BPEG|CNM5|MYLK6|SPEGalpha|SPEGbeta striated muscle enriched protein kinase protein-coding chr7-1389 chr7 117407317 117407561 + 11.6 0.000 intron (NM_001301821, intron 4 of 12) MER44D|DNA|TcMar-Tigger 20054 NM_001301821 136991 Hs.352412 NM_130768 ENSG00000154438 ASZ1 ALP1|ANKL1|C7orf7|CT1.19|GASZ|Orf3 ankyrin repeat, SAM and basic leucine zipper domain containing 1 protein-coding chr4-375 chr4 99088606 99088850 + 11.6 0.000 promoter-TSS (NR_037884) promoter-TSS (NR_037884) 60 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr1-2633 chr1 212218914 212219158 + 11.6 0.000 intron (NR_125982, intron 2 of 3) intron (NR_125982, intron 2 of 3) 15700 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr16-1247 chr16 89762777 89763021 + 11.6 0.000 intron (NM_000135, intron 28 of 42) AluY|SINE|Alu 41362 NR_110129 92822 Hs.290154 NM_152287 ENSG00000158805 ZNF276 CENP-Z|CENPZ|ZADT|ZFP276|ZNF477 zinc finger protein 276 protein-coding chr17-837 chr17 1273222 1273466 + 11.6 0.000 Intergenic AluSx|SINE|Alu 2780 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr9-1386 chr9 134450599 134450843 + 11.6 0.000 Intergenic MLT1A0|LTR|ERVL-MaLR 44161 NM_001291921 6256 Hs.590886 NM_002957 ENSG00000186350 RXRA NR2B1 retinoid X receptor alpha protein-coding chr14-633 chr14 64693364 64693608 + 11.6 0.000 Intergenic MER3|DNA|hAT-Charlie -10938 NM_001308147 26030 Hs.509637 NM_015549 ENSG00000126822 PLEKHG3 ARHGEF43|KIAA0599 pleckstrin homology and RhoGEF domain containing G3 protein-coding chr2-1560 chr2 219535231 219535475 + 11.6 0.000 intron (NM_018674, intron 6 of 9) (GT)n|Simple_repeat|Simple_repeat 7744 NM_001195731 79586 Hs.516711 NM_024536 ENSG00000123989 CHPF CHSY2|CSS2 chondroitin polymerizing factor protein-coding chr11-1501 chr11 61720565 61720809 + 11.6 0.000 exon (NM_006133, exon 3 of 20) exon (NM_006133, exon 3 of 20) -31949 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr5-712 chr5 80040 80284 + 11.6 0.000 Intergenic Intergenic -12006 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr9-339 chr9 128458420 128458664 + 11.5 0.000 intron (NM_153433, intron 2 of 20) intron (NM_153433, intron 2 of 20) 1635 NM_153437 4957 Hs.129055 NM_002540 ENSG00000136811 ODF2 CT134|ODF2/1|ODF2/2|ODF84 outer dense fiber of sperm tails 2 protein-coding chrX-371 chrX 46628765 46629009 + 11.5 0.000 intron (NM_001257291, intron 14 of 16) intron (NM_001257291, intron 14 of 16) 55122 NM_019886 56548 Hs.129955 NM_019886 ENSG00000147119 CHST7 C6ST-2|GST-5 carbohydrate sulfotransferase 7 protein-coding chrX-413 chrX 8868529 8868773 + 11.5 0.000 Intergenic Intergenic -67268 NM_174951 171482 Hs.382062 NM_174951 ENSG00000183304 FAM9A TEX39A family with sequence similarity 9 member A protein-coding chr19-1650 chr19 49065785 49066029 + 11.5 0.000 Intergenic Intergenic -2040 NM_006179 4909 Hs.266902 NM_006179 ENSG00000225950 NTF4 GLC10|GLC1O|NT-4|NT-4/5|NT-5|NT4|NT5|NTF5 neurotrophin 4 protein-coding chr20-416 chr20 31053889 31054133 + 11.5 0.000 Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -203653 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding chr19-950 chr19 15250338 15250582 + 11.5 0.000 intron (NM_014299, intron 11 of 11) intron (NM_014299, intron 11 of 11) -17413 NM_001142886 79852 Hs.156457 NM_024794 ENSG00000105131 EPHX3 ABHD9|EH3 epoxide hydrolase 3 protein-coding chr14-585 chr14 102555280 102555524 + 11.5 0.000 non-coding (NR_146561, exon 3 of 3) non-coding (NR_146561, exon 3 of 3) 10148 NR_146561 105370681 NR_146561 ENSG00000259230 LINC02323 - long intergenic non-protein coding RNA 2323 ncRNA chr12-1033 chr12 3251104 3251348 + 11.5 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 114896 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr2-1727 chr2 71465325 71465569 + 11.5 0.000 intron (NM_003494, intron 1 of 54) L2a|LINE|L2 -1252 NM_001130982 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding chr10-1108 chr10 26328156 26328400 + 11.5 0.000 Intergenic Intergenic -110063 NM_019043 54518 Hs.310421 NM_019043 ENSG00000077420 APBB1IP INAG1|PREL1|RARP1|RIAM amyloid beta precursor protein binding family B member 1 interacting protein protein-coding chr3-672 chr3 134650920 134651164 + 11.5 0.000 promoter-TSS (NM_001366276) promoter-TSS (NM_001366276) -20 NM_001366277 339855 Hs.146730 NM_178554 ENSG00000174611 KY MFM7 kyphoscoliosis peptidase protein-coding chr17-706 chr17 67045317 67045561 + 11.5 0.000 intron (NM_000727, intron 1 of 3) MER45A|DNA|hAT-Tip100 885 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding chr11-1509 chr11 62620501 62620745 + 11.5 0.000 exon (NM_001288721, exon 3 of 6) exon (NM_001288721, exon 3 of 6) 1363 NM_001288722 26229 Hs.502759 NM_012200 ENSG00000149541 B3GAT3 GLCATI|JDSCD|glcUAT-I beta-1,3-glucuronyltransferase 3 protein-coding chr10-213 chr10 41883360 41883604 + 11.5 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 484563 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr17-1188 chr17 81233108 81233352 + 11.5 0.000 intron (NM_001363764, intron 7 of 12) intron (NM_001363764, intron 7 of 12) 4523 NR_135654 105371925 Hs.620720 NR_135654 LOC105371925 - uncharacterized LOC105371925 ncRNA chr18-355 chr18 66605951 66606195 + 11.5 0.000 Intergenic AluYm1|SINE|Alu -1983 NM_021153 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr2-1221 chr2 37344831 37345075 + 11.5 0.000 intron (NM_012413, intron 1 of 6) CpG 323 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding chr10-1058 chr10 125790071 125790315 + 11.5 0.000 intron (NR_136676, intron 9 of 10) intron (NR_136676, intron 9 of 10) -14372 NM_147191 118856 Hs.314141 NM_147191 ENSG00000154485 MMP21 HTX7|MMP-21 matrix metallopeptidase 21 protein-coding chr22-584 chr22 39233978 39234222 + 11.5 0.000 intron (NM_002608, intron 2 of 6) intron (NM_002608, intron 2 of 6) 6809 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding chr10-1223 chr10 91604889 91605133 + 11.5 0.000 intron (NR_024467, intron 1 of 4) intron (NR_024467, intron 1 of 4) 6449 NR_024467 100188947 Hs.535293 NR_024467 HECTD2-AS1 - HECTD2 antisense RNA 1 ncRNA chr12-998 chr12 114704127 114704371 + 11.5 0.000 Intergenic Intergenic -20074 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding chr2-1601 chr2 8278000 8278244 + 11.5 0.000 intron (NR_152741, intron 8 of 9) intron (NR_152741, intron 8 of 9) 50297 NR_034135 339789 Hs.565619 NR_034135 ENSG00000236790 LINC00299 C2orf46|NCRNA00299 long intergenic non-protein coding RNA 299 ncRNA chr11-404 chr11 130091270 130091514 + 11.5 0.000 intron (NM_001243299, intron 1 of 16) SVA_F|Retroposon|SVA 20824 NM_001243299 334 Hs.370247 NM_001642 ENSG00000084234 APLP2 APLP-2|APPH|APPL2|CDEBP amyloid beta precursor like protein 2 protein-coding chr9-784 chr9 80798086 80798330 + 11.5 0.000 Intergenic Intergenic 823185 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr6-944 chr6 34035924 34036168 + 11.5 0.000 exon (NM_001256812, exon 8 of 10) exon (NM_001256812, exon 8 of 10) -35995 NR_031681 100302123 NR_031681 ENSG00000221697 MIR1275 MIRN1275|hsa-mir-1275|mir-1275 microRNA 1275 ncRNA chr3-1291 chr3 49910165 49910409 + 11.5 0.000 exon (NM_032355, exon 4 of 6) exon (NM_032355, exon 4 of 6) -6414 NR_134919 4486 Hs.517973 NM_002447 ENSG00000164078 MST1R CD136|CDw136|NPCA3|PTK8|RON macrophage stimulating 1 receptor protein-coding chr22-561 chr22 20111188 20111432 + 11.5 0.000 TTS (NM_182984) TTS (NM_182984) 3441 NR_106874 102465490 NR_106874 ENSG00000278278 MIR6816 hsa-mir-6816 microRNA 6816 ncRNA chr16-774 chr16 1287988 1288232 + 11.5 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -21042 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr7-905 chr7 5837574 5837818 + 11.5 0.000 intron (NR_023382, intron 2 of 6) intron (NR_023382, intron 2 of 6) 14536 NR_023382 401303 Hs.372707 NR_023382 ZNF815P ZNF815 zinc finger protein 815, pseudogene pseudo chr7-1234 chr7 22380130 22380374 + 11.5 0.000 Intergenic Intergenic -23098 NM_012294 9771 Hs.174768 NM_012294 ENSG00000136237 RAPGEF5 GFR|MR-GEF|REPAC Rap guanine nucleotide exchange factor 5 protein-coding chr12-1191 chr12 101471648 101471892 + 11.5 0.000 Intergenic AluJo|SINE|Alu -3566 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr19-1084 chr19 19528779 19529023 + 11.5 0.000 promoter-TSS (NM_001190328) promoter-TSS (NM_001190328) -10 NM_198537 374887 Hs.729508 NM_198537 ENSG00000250067 YJEFN3 - YjeF N-terminal domain containing 3 protein-coding chr3-558 chr3 14402563 14402807 + 11.5 0.000 promoter-TSS (NM_001134368) promoter-TSS (NM_001134368) 79 NR_103507 6533 Hs.529488 NM_003043 ENSG00000131389 SLC6A6 TAUT solute carrier family 6 member 6 protein-coding chr8-795 chr8 142542664 142542908 + 11.5 0.000 intron (NM_001702, intron 28 of 30) intron (NM_001702, intron 28 of 30) 71693 NM_015193 23237 Hs.40888 NM_015193 ENSG00000198576 ARC Arg3.1|hArc activity regulated cytoskeleton associated protein protein-coding chr6-993 chr6 48297598 48297842 + 11.5 0.000 Intergenic FRAM|SINE|Alu -229031 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr2-1684 chr2 43867877 43868121 + 11.5 0.000 intron (NM_001357321, intron 6 of 12) intron (NM_001357321, intron 6 of 12) 29028 NM_022437 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding chr6-693 chr6 78792629 78792873 + 11.5 0.000 Intergenic AluJr4|SINE|Alu -74800 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding chr16-726 chr16 55181392 55181636 + 11.5 0.000 Intergenic Intergenic -143045 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding chr1-2486 chr1 115705770 115706014 + 11.5 0.000 intron (NM_001232, intron 8 of 10) LTR81A|LTR|Gypsy 62913 NM_001232 845 Hs.57975 NM_001232 ENSG00000118729 CASQ2 PDIB2 calsequestrin 2 protein-coding chr4-593 chr4 40599964 40600208 + 11.5 0.000 intron (NM_001371114, intron 1 of 5) AluJr|SINE|Alu 29778 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr17-895 chr17 80101489 80101733 + 11.5 0.000 promoter-TSS (NM_001079803) promoter-TSS (NM_001079803) 30 NM_001079804 2548 Hs.1437 NM_000152 ENSG00000171298 GAA LYAG glucosidase alpha, acid protein-coding chr17-483 chr17 31549761 31550005 + 11.5 0.000 Intergenic CpG -10113 NR_029710 406968 NR_029710 ENSG00000207614 MIR193A MIRN193|MIRN193A|mir-193a microRNA 193a ncRNA chr7-1037 chr7 139752598 139752842 + 11.5 0.000 intron (NM_001113239, intron 1 of 14) intron (NM_001113239, intron 1 of 14) 25278 NM_001113239 28996 Hs.731417 NM_022740 ENSG00000064393 HIPK2 PRO0593 homeodomain interacting protein kinase 2 protein-coding chr8-544 chr8 144820955 144821199 + 11.5 0.000 intron (NR_147501, intron 1 of 4) intron (NR_147501, intron 1 of 4) 5963 NR_147501 100130027 Hs.639618 NR_147501 LOC100130027 - uncharacterized LOC100130027 ncRNA chr2-1462 chr2 43831351 43831595 + 11.5 0.000 intron (NM_022436, intron 4 of 12) MER33|DNA|hAT-Charlie 7366 NM_022436 64240 Hs.132992 NM_022436 ENSG00000138075 ABCG5 STSL ATP binding cassette subfamily G member 5 protein-coding chr17-1191 chr17 81727665 81727909 + 11.5 0.000 Intergenic Intergenic 15503 NM_001270888 1468 Hs.548187 NM_012140 ENSG00000183048 SLC25A10 DIC solute carrier family 25 member 10 protein-coding chr17-1199 chr17 82629811 82630055 + 11.5 0.000 intron (NM_019613, intron 3 of 9) intron (NM_019613, intron 3 of 9) 18511 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding chr1-2057 chr1 107056572 107056816 + 11.5 0.000 promoter-TSS (NM_018137) promoter-TSS (NM_018137) 20 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr2-1711 chr2 61620927 61621171 + 11.5 0.000 Intergenic MLT1G|LTR|ERVL-MaLR -82693 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding chr1-2539 chr1 161118061 161118305 + 11.5 0.000 promoter-TSS (NM_001185093) promoter-TSS (NM_001185093) 65 NM_001185094 4817 Hs.146406 NM_005600 ENSG00000158793 NIT1 - nitrilase 1 protein-coding chr9-1180 chr9 17604885 17605129 + 11.5 0.000 intron (NM_003026, intron 1 of 8) AluJr|SINE|Alu 25941 NM_003026 6456 Hs.75149 NM_003026 ENSG00000107295 SH3GL2 CNSA2|EEN-B1|SH3D2A|SH3P4 SH3 domain containing GRB2 like 2, endophilin A1 protein-coding chr8-916 chr8 96359872 96360116 + 11.5 0.000 Intergenic Intergenic 26654 NR_125829 102724804 Hs.571415 NR_125828 ENSG00000253105 LOC102724804 - uncharacterized LOC102724804 ncRNA chr11-1442 chr11 32939839 32940083 + 11.5 0.000 intron (NM_001076786, intron 4 of 12) L1MEf|LINE|L1 47150 NM_001076786 79832 Hs.369368 NM_024774 ENSG00000060749 QSER1 - glutamine and serine rich 1 protein-coding chr11-1633 chr11 107840662 107840906 + 11.5 0.000 intron (NM_017515, intron 1 of 7) intron (NM_017515, intron 1 of 7) 18003 NM_017515 54733 Hs.524014 NM_017515 ENSG00000110660 SLC35F2 HSNOV1 solute carrier family 35 member F2 protein-coding chr2-1301 chr2 121075306 121075550 + 11.5 0.000 Intergenic Intergenic 209774 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding chr5-964 chr5 53638 53882 + 11.5 0.000 Intergenic CpG -38408 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr11-1130 chr11 64906175 64906419 + 11.5 0.000 intron (NM_015104, intron 21 of 40) intron (NM_015104, intron 21 of 40) -3842 NR_106807 102466727 NR_106807 ENSG00000274314 MIR6749 hsa-mir-6749 microRNA 6749 ncRNA chr4-893 chr4 2444159 2444403 + 11.5 0.000 intron (NM_001193282, intron 5 of 15) intron (NM_001193282, intron 5 of 15) -24825 NM_001185010 6047 Hs.66394 NM_002938 ENSG00000063978 RNF4 RES4-26|SLX5|SNURF ring finger protein 4 protein-coding chr2-1202 chr2 25043217 25043461 + 11.5 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 876 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr1-2253 chr1 16064962 16065206 + 11.5 0.000 intron (NM_182623, intron 1 of 6) L2|LINE|L2 8567 NM_182623 348487 Hs.126825 NM_182623 ENSG00000185519 FAM131C C1orf117 family with sequence similarity 131 member C protein-coding chr19-1068 chr19 8151549 8151793 + 11.5 0.000 Intergenic Intergenic -2079 NM_032447 84467 Hs.370362 NM_032447 ENSG00000142449 FBN3 - fibrillin 3 protein-coding chr1-2093 chr1 171841234 171841478 + 11.5 0.000 promoter-TSS (NM_001350204) promoter-TSS (NM_001350204) -142 NM_015569 26052 Hs.654775 NM_015569 ENSG00000197959 DNM3 Dyna III dynamin 3 protein-coding chr8-830 chr8 27574197 27574441 + 11.5 0.000 Intergenic Intergenic 36432 NR_106902 102465508 NR_106902 ENSG00000284280 MIR6843 hsa-mir-6843 microRNA 6843 ncRNA chr5-1146 chr5 149406885 149407129 + 11.5 0.000 non-coding (NR_105059, exon 1 of 6) non-coding (NR_105059, exon 1 of 6) 162 NR_105059 728264 Hs.519666 NR_027180 CARMN CARMEN|MIR143HG cardiac mesoderm enhancer-associated non-coding RNA ncRNA chr3-1348 chr3 86960714 86960958 + 11.5 0.000 intron (NM_001320494, intron 3 of 3) intron (NM_001320494, intron 3 of 3) 30313 NM_001320494 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding chr21-217 chr21 45405530 45405774 + 11.5 0.000 intron (NM_130445, intron 2 of 42) CpG-18567 487 NM_130445 80781 Hs.517356 NM_030582 ENSG00000182871 COL18A1 KNO|KNO1|KS collagen type XVIII alpha 1 chain protein-coding chr1-2487 chr1 116164612 116164856 + 11.5 0.000 Intergenic Intergenic 52979 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding chr6-956 chr6 36615107 36615351 + 11.5 0.000 Intergenic AluJo|SINE|Alu 7283 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA chr5-974 chr5 2237825 2238069 + 11.5 0.000 Intergenic L1MA4A|LINE|L1 74254 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA chr13-326 chr13 42026751 42026995 + 11.5 0.000 Intergenic Intergenic -13163 NM_001204504 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding chr6-810 chr6 52577199 52577443 + 11.5 0.000 promoter-TSS (NM_012288) promoter-TSS (NM_012288) 23 NR_103447 401264 Hs.544586 NR_103446 ENSG00000225791 TRAM2-AS1 - TRAM2 antisense RNA 1 (head to head) ncRNA chr3-819 chr3 13357368 13357612 + 11.5 0.000 intron (NM_024923, intron 16 of 39) L2a|LINE|L2 62832 NM_024923 23225 Hs.475525 NM_024923 ENSG00000132182 NUP210 GP210|POM210 nucleoporin 210 protein-coding GL000214.1-2 GL000214.1 104718 104962 + 11.5 0.000 NA NA NA NA chr3-1087 chr3 4467183 4467427 + 11.5 0.000 promoter-TSS (NM_182760) promoter-TSS (NM_182760) -23 NM_001164674 285362 Hs.350475 NM_182760 ENSG00000144455 SUMF1 AAPA3037|FGE|UNQ3037 sulfatase modifying factor 1 protein-coding chr2-1108 chr2 96305495 96305739 + 11.5 0.000 promoter-TSS (NM_014014) promoter-TSS (NM_014014) -71 NM_014014 23020 Hs.246112 NM_014014 ENSG00000144028 SNRNP200 ASCC3L1|BRR2|HELIC2|RP33|U5-200KD small nuclear ribonucleoprotein U5 subunit 200 protein-coding chr16-1091 chr16 29899548 29899792 + 11.5 0.000 promoter-TSS (NM_001243333) promoter-TSS (NM_001243333) -120 NM_012410 26470 Hs.6314 NM_012410 ENSG00000174938 SEZ6L2 BSRPA|PSK-1 seizure related 6 homolog like 2 protein-coding chr11-1521 chr11 64276750 64276994 + 11.5 0.000 intron (NM_004322, intron 1 of 2) intron (NM_004322, intron 1 of 2) -7467 NM_001170726 56834 Hs.523763 NM_020155 ENSG00000173264 GPR137 C11orf4|GPR137A|TM7SF1L1 G protein-coupled receptor 137 protein-coding chr5-591 chr5 77942728 77942972 + 11.5 0.000 intron (NR_105012, intron 1 of 1) AluJb|SINE|Alu -15397 NR_105013 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA chr1-1733 chr1 37128101 37128345 + 11.5 0.000 Intergenic Intergenic -33340 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA chr8-345 chr8 61023633 61023877 + 11.5 0.000 Intergenic Intergenic -56007 NR_034003 100130298 Hs.636194 NR_034003 LOC100130298 - hCG1816373-like ncRNA chr8-564 chr8 47960052 47960296 + 11.5 0.000 promoter-TSS (NM_005914) promoter-TSS (NM_005914) 9 NM_006904 5591 Hs.491682 NM_006904 ENSG00000253729 PRKDC DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 protein kinase, DNA-activated, catalytic subunit protein-coding chr16-895 chr16 88864064 88864308 + 11.5 0.000 intron (NM_001294328, intron 5 of 5) intron (NM_001294328, intron 5 of 5) 2474 NM_001080487 390748 Hs.730522 NM_001080487 ENSG00000205022 PABPN1L PABPNL1|ePABP2 poly(A) binding protein nuclear 1 like, cytoplasmic protein-coding chr6-1117 chr6 158818498 158818742 + 11.5 0.000 promoter-TSS (NM_003379) promoter-TSS (NM_003379) -385 NM_003379 7430 Hs.487027 NM_003379 ENSG00000092820 EZR CVIL|CVL|HEL-S-105|VIL2 ezrin protein-coding chr12-829 chr12 48985362 48985606 + 11.5 0.000 Intergenic Intergenic 7162 NM_005430 7471 Hs.248164 NM_005430 ENSG00000125084 WNT1 BMND16|INT1|OI15 Wnt family member 1 protein-coding chr14-188 chr14 84509504 84509748 + 11.5 0.000 Intergenic L1M5|LINE|L1 -762306 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA chr10-1236 chr10 96236099 96236343 + 11.5 0.000 intron (NM_013314, intron 3 of 16) intron (NM_013314, intron 3 of 16) 35295 NM_001258440 29760 Hs.665244 NM_013314 ENSG00000095585 BLNK AGM4|BASH|BLNK-S|LY57|SLP-65|SLP65|bca B cell linker protein-coding chr22-480 chr22 29772368 29772612 + 11.5 0.000 Intergenic L2a|LINE|L2 5121 NM_013387 29796 Hs.284292 NM_013387 ENSG00000184076 UQCR10 HSPC051|HSPC119|HSPC151|QCR9|UCCR7.2|UCRC ubiquinol-cytochrome c reductase, complex III subunit X protein-coding chr2-1919 chr2 215154002 215154246 + 11.3 0.000 Intergenic L1MC1|LINE|L1 -15498 NR_103740 26154 Hs.134585 NM_015657 ENSG00000144452 ABCA12 ARCI4A|ARCI4B|ICR2B|LI2 ATP binding cassette subfamily A member 12 protein-coding chr12-855 chr12 69017577 69017821 + 11.3 0.000 Intergenic Intergenic -54459 NM_001874 1368 Hs.654387 NM_001874 ENSG00000135678 CPM - carboxypeptidase M protein-coding chr15-327 chr15 59590814 59591058 + 11.3 0.000 Intergenic AluSx|SINE|Alu -20847 NM_004751 9245 Hs.194710 NM_004751 ENSG00000140297 GCNT3 C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM glucosaminyl (N-acetyl) transferase 3, mucin type protein-coding chr19-568 chr19 1971631 1971875 + 11.3 0.000 intron (NM_001319, intron 2 of 11) intron (NM_001319, intron 2 of 11) -17204 NR_033400 255193 Hs.374717 NM_152771 ENSG00000180846 CSNK1G2-AS1 C19orf34 CSNK1G2 antisense RNA 1 ncRNA chr8-880 chr8 57649142 57649386 + 11.3 0.000 Intergenic Intergenic -96885 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA chr14-683 chr14 29947959 29948203 + 11.3 0.000 Intergenic L1MD1|LINE|L1 -20234 NM_001330069 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding chr19-1560 chr19 19356880 19357124 + 11.3 0.000 3' UTR (NM_015329, exon 19 of 19) 3' UTR (NM_015329, exon 19 of 19) -28801 NM_017660 54815 Hs.118964 NM_017660 ENSG00000167491 GATAD2A p66alpha GATA zinc finger domain containing 2A protein-coding chr19-1658 chr19 50461270 50461514 + 11.3 0.000 intron (NM_004533, intron 24 of 27) L1MB5|LINE|L1 -15115 NM_206538 284361 Hs.448941 NM_175063 ENSG00000161671 EMC10 C19orf63|HSM1|HSS1 ER membrane protein complex subunit 10 protein-coding chr7-1441 chr7 149626106 149626350 + 11.3 0.000 Intergenic Intergenic -1438 NR_027788 79970 Hs.520785 NM_024910 ENSG00000133624 ZNF767P ZNF767 zinc finger family member 767, pseudogene pseudo chr8-779 chr8 123396450 123396694 + 11.3 0.000 promoter-TSS (NM_014109) promoter-TSS (NM_014109) -125 NM_014109 29028 Hs.370834 NM_014109 ENSG00000156802 ATAD2 ANCCA|CT137|PRO2000 ATPase family AAA domain containing 2 protein-coding chr3-1491 chr3 187367814 187368058 + 11.3 0.000 promoter-TSS (NM_022147) promoter-TSS (NM_022147) -449 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding chr16-777 chr16 1356254 1356498 + 11.3 0.000 intron (NM_032520, intron 3 of 10) intron (NM_032520, intron 3 of 10) 4445 NM_032520 84572 Hs.241575 NM_032520 ENSG00000090581 GNPTG C16orf27|GNPTAG|LP2537|RJD9 N-acetylglucosamine-1-phosphate transferase subunit gamma protein-coding chr16-1058 chr16 5001270 5001514 + 11.3 0.000 intron (NM_014692, intron 10 of 15) AluY|SINE|Alu -32310 NR_038913 100507589 Hs.729936 NR_038913 NAGPA-AS1 - NAGPA antisense RNA 1 ncRNA chr12-1193 chr12 101876871 101877115 + 11.3 0.000 promoter-TSS (NM_018370) promoter-TSS (NM_018370) -587 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr6-696 chr6 83183743 83183987 + 11.3 0.000 intron (NR_159812, intron 4 of 14) AluSq2|SINE|Alu 9400 NM_015599 5238 Hs.661665 NM_015599 ENSG00000013375 PGM3 AGM1|IMD23|PAGM|PGM 3 phosphoglucomutase 3 protein-coding chr1-2289 chr1 22160901 22161145 + 11.3 0.000 Intergenic Intergenic -17926 NM_030761 54361 Hs.25766 NM_030761 ENSG00000162552 WNT4 SERKAL|WNT-4 Wnt family member 4 protein-coding chr1-1253 chr1 2441897 2442141 + 11.3 0.000 Intergenic Intergenic -25432 NM_001303012 9651 Hs.170156 NM_014638 ENSG00000149527 PLCH2 PLC-L4|PLC-eta2|PLCL4|PLCeta2 phospholipase C eta 2 protein-coding chr20-595 chr20 37486373 37486617 + 11.3 0.000 Intergenic Intergenic 33808 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding chr17-1382 chr17 67378294 67378538 + 11.3 0.000 intron (NM_181671, intron 1 of 9) CpG 1135 NM_012417 26207 Hs.591185 NM_012417 ENSG00000154217 PITPNC1 M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 phosphatidylinositol transfer protein cytoplasmic 1 protein-coding chr4-1075 chr4 141131341 141131585 + 11.3 0.000 intron (NM_020724, intron 1 of 6) intron (NM_020724, intron 1 of 6) 2006 NM_020724 57484 Hs.659104 NM_020724 ENSG00000170153 RNF150 - ring finger protein 150 protein-coding chr1-1127 chr1 1753266 1753510 + 11.3 0.000 intron (NM_001353641, intron 11 of 11) intron (NM_001353641, intron 11 of 11) 5254 NM_001198995 65220 Hs.654792 NM_023018 ENSG00000008130 NADK dJ283E3.1 NAD kinase protein-coding chr10-754 chr10 110516422 110516666 + 11.3 0.000 Intergenic AluSz|SINE|Alu 18637 NM_004419 1847 Hs.2128 NM_004419 ENSG00000138166 DUSP5 DUSP|HVH3 dual specificity phosphatase 5 protein-coding chr5-923 chr5 132258045 132258289 + 11.3 0.000 intron (NM_001131027, intron 1 of 5) intron (NM_001131027, intron 1 of 5) 471 NM_003687 8572 Hs.424312 NM_003687 ENSG00000131435 PDLIM4 RIL PDZ and LIM domain 4 protein-coding chr1-1103 chr1 211917966 211918210 + 11.3 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 87127 NR_135820 102723727 Hs.147656 NR_135818 ENSG00000229258 LPGAT1-AS1 - LPGAT1 antisense RNA 1 ncRNA chr19-1660 chr19 51926876 51927120 + 11.3 0.000 promoter-TSS (NM_024840) promoter-TSS (NM_024840) -474 NM_024840 79898 Hs.183390 NM_024840 ENSG00000176024 ZNF613 - zinc finger protein 613 protein-coding chr6-991 chr6 47478044 47478288 + 11.3 0.000 5' UTR (NM_012120, exon 1 of 18) 5' UTR (NM_012120, exon 1 of 18) 377 NM_012120 23607 Hs.485518 NM_012120 ENSG00000198087 CD2AP CMS CD2 associated protein protein-coding chr16-1183 chr16 80084666 80084910 + 11.3 0.000 Intergenic Intergenic 289539 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chrX-466 chrX 54993262 54993506 + 11.3 0.000 intron (NR_073450, intron 1 of 12) intron (NR_073450, intron 1 of 12) 804 NR_073450 5207 Hs.444304 NM_002625 ENSG00000158571 PFKFB1 F6PK|HL2K|PFRX 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 protein-coding chr17-1089 chr17 82781842 82782086 + 11.3 0.000 intron (NM_005993, intron 7 of 38) intron (NM_005993, intron 7 of 38) 29899 NM_005993 6904 Hs.464391 NM_005993 ENSG00000141556 TBCD PEBAT|SSD-1|tfcD tubulin folding cofactor D protein-coding chr5-965 chr5 153357 153601 + 11.3 0.000 intron (NM_052909, intron 7 of 19) L1MEf|LINE|L1 -38016 NM_001080478 389257 Hs.103142 NM_001080478 ENSG00000185028 LRRC14B - leucine rich repeat containing 14B protein-coding chr22-450 chr22 39592780 39593024 + 11.3 0.000 intron (NM_001003406, intron 1 of 35) intron (NM_001003406, intron 1 of 35) 22149 NM_021096 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr17-1170 chr17 75737822 75738066 + 11.3 0.000 intron (NM_001005619, intron 17 of 38) intron (NM_001005619, intron 17 of 38) 13248 NM_001005619 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr16-819 chr16 51152085 51152329 + 11.3 0.000 promoter-TSS (NM_002968) promoter-TSS (NM_002968) -935 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding chr1-2266 chr1 18927897 18928141 + 11.3 0.000 intron (NM_001136265, intron 1 of 8) intron (NM_001136265, intron 1 of 8) -25220 NM_001319218 8659 Hs.77448 NM_003748 ENSG00000159423 ALDH4A1 ALDH4|P5CD|P5CDh aldehyde dehydrogenase 4 family member A1 protein-coding chr7-1221 chr7 10802591 10802835 + 11.3 0.000 Intergenic Intergenic -22769 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA chr17-1440 chr17 80931857 80932101 + 11.3 0.000 intron (NM_020761, intron 24 of 33) L1MCc|LINE|L1 39234 NR_148968 400627 Hs.591201 NR_148968 ENSG00000261924 LOC400627 - uncharacterized LOC400627 ncRNA chr2-1949 chr2 224678732 224678976 + 11.3 0.000 Intergenic Intergenic -93457 NM_001257197 8452 Hs.372286 NM_003590 ENSG00000036257 CUL3 CUL-3|PHA2E cullin 3 protein-coding chr17-1174 chr17 77066695 77066939 + 11.3 0.000 Intergenic Intergenic -21826 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA chr9-652 chr9 41074301 41074545 + 11.3 0.000 non-coding (NR_002836, exon 1 of 9) non-coding (NR_002836, exon 1 of 9) 202 NR_002836 595135 Hs.571593 NR_002836 ENSG00000277778 PGM5P2 - phosphoglucomutase 5 pseudogene 2 pseudo chr15-669 chr15 65078005 65078249 + 11.3 0.000 exon (NM_001101362, exon 1 of 1) exon (NM_001101362, exon 1 of 1) 1311 NM_001101362 390594 Hs.586890 NM_001101362 ENSG00000234438 KBTBD13 HCG1645727|NEM6 kelch repeat and BTB domain containing 13 protein-coding chr10-1117 chr10 28984444 28984688 + 11.3 0.000 Intergenic Intergenic 138158 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding chr1-2493 chr1 119986939 119987183 + 11.3 0.000 exon (NM_024408, exon 5 of 34) exon (NM_024408, exon 5 of 34) 82601 NM_024408 4853 Hs.487360 NM_024408 ENSG00000134250 NOTCH2 AGS2|HJCYS|hN2 notch receptor 2 protein-coding chr22-715 chr22 43229008 43229252 + 11.3 0.000 exon (NM_173050, exon 9 of 22) exon (NM_173050, exon 9 of 22) 16456 NR_134632 105373051 Hs.629290 NR_134632 ENSG00000236272 LOC105373051 - uncharacterized LOC105373051 ncRNA chr1-1602 chr1 244235558 244235802 + 11.3 0.000 Intergenic Intergenic -116955 NM_001276349 200159 Hs.442703 NM_001012970 ENSG00000173728 C1orf100 - chromosome 1 open reading frame 100 protein-coding chr1-1590 chr1 227889088 227889332 + 11.3 0.000 Intergenic Intergenic 52473 NR_049806 100847072 NR_049806 ENSG00000264483 MIR5008 - microRNA 5008 ncRNA chr12-1217 chr12 109281483 109281727 + 11.3 0.000 exon (NM_213596, exon 9 of 10) exon (NM_213596, exon 9 of 10) 27679 NM_213596 121643 Hs.528316 NM_213596 ENSG00000139445 FOXN4 - forkhead box N4 protein-coding chr5-230 chr5 59275982 59276226 + 11.3 0.000 promoter-TSS (NM_001197220) promoter-TSS (NM_001197220) 11 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr17-1203 chr17 774853 775097 + 11.3 0.000 intron (NM_016080, intron 4 of 8) AluSx|SINE|Alu 7305 NM_001366248 51031 Hs.279061 NM_016080 ENSG00000167699 GLOD4 C17orf25|CGI-150|HC71 glyoxalase domain containing 4 protein-coding chr4-73 chr4 98929187 98929431 + 11.3 0.000 promoter-TSS (NM_001130678) promoter-TSS (NM_001130678) -176 NM_001130678 1977 Hs.13211 NM_001968 ENSG00000151247 EIF4E AUTS19|CBP|EIF4E1|EIF4EL1|EIF4F|eIF-4E eukaryotic translation initiation factor 4E protein-coding chrX-499 chrX 84699452 84699696 + 11.3 0.000 Intergenic L1PA8|LINE|L1 -197121 NM_001177479 139324 Hs.559546 NM_144657 ENSG00000165259 HDX CXorf43|D030011N01Rik highly divergent homeobox protein-coding chr8-728 chr8 22131296 22131540 + 11.3 0.000 promoter-TSS (NM_005144) promoter-TSS (NM_005144) -366 NM_018411 55806 Hs.272367 NM_005144 ENSG00000168453 HR ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1 HR lysine demethylase and nuclear receptor corepressor protein-coding chr2-1796 chr2 113240082 113240326 + 11.3 0.000 non-coding (NR_047570, exon 3 of 3) non-coding (NR_047570, exon 3 of 3) 3935 NR_015377 654433 Hs.656660 NR_015377 ENSG00000189223 PAX8-AS1 - PAX8 antisense RNA 1 ncRNA chr4-541 chr4 118352816 118353060 + 11.3 0.000 promoter-TSS (NM_003619) promoter-TSS (NM_003619) 65 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr4-826 chr4 77820729 77820973 + 11.3 0.000 promoter-TSS (NM_001365006) promoter-TSS (NM_001365006) -582 NM_001365006 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding chr2-924 chr2 36965929 36966173 + 11.3 0.000 intron (NM_003162, intron 1 of 17) CpG 485 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr19-1094 chr19 35784603 35784847 + 11.3 0.000 intron (NM_001366178, intron 16 of 20) intron (NM_001366178, intron 16 of 20) 9161 NM_001366178 115703 Hs.515364 NM_052948 ENSG00000004777 ARHGAP33 NOMA-GAP|SNX26|TCGAP Rho GTPase activating protein 33 protein-coding chr10-1041 chr10 104210820 104211064 + 11.3 0.000 intron (NM_025145, intron 5 of 37) AluY|SINE|Alu 7941 NR_030340 693194 NR_030340 ENSG00000208033 MIR609 MIRN609|hsa-mir-609 microRNA 609 ncRNA chrY-25 chrY 11747560 11747804 + 11.3 0.000 Intergenic (GAATG)n|Satellite|Satellite 673908 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr19-1432 chr19 1623373 1623617 + 11.3 0.000 intron (NM_001136139, intron 8 of 19) AluSx|SINE|Alu -18033 NM_006830 10975 Hs.8372 NM_006830 ENSG00000127540 UQCR11 0710008D09Rik|QCR10|UQCR ubiquinol-cytochrome c reductase, complex III subunit XI protein-coding chr10-758 chr10 121598305 121598549 + 11.3 0.000 promoter-TSS (NM_000141) promoter-TSS (NM_000141) 17 NM_001144918 2263 Hs.533683 NM_000141 ENSG00000066468 FGFR2 BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 fibroblast growth factor receptor 2 protein-coding chr9-1102 chr9 114175380 114175624 + 11.3 0.000 intron (NM_032888, intron 3 of 60) intron (NM_032888, intron 3 of 60) 19965 NM_032888 85301 Hs.494892 NM_032161 ENSG00000196739 COL27A1 STLS collagen type XXVII alpha 1 chain protein-coding chr16-1101 chr16 30984038 30984282 + 11.3 0.000 3' UTR (NM_014712, exon 19 of 19) 3' UTR (NM_014712, exon 19 of 19) -1047 NM_025193 80270 Hs.460618 NM_025193 ENSG00000099377 HSD3B7 CBAS1|PFIC4|SDR11E3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 protein-coding chr4-1000 chr4 75940844 75941088 + 11.3 0.000 promoter-TSS (NM_001042402) promoter-TSS (NM_001042402) 47 NM_001042402 27163 Hs.437365 NM_014435 ENSG00000138744 NAAA ASAHL|PLT N-acylethanolamine acid amidase protein-coding chr9-867 chr9 28260101 28260345 + 11.3 0.000 intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 459082 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding chr12-907 chr12 122046050 122046294 + 11.3 0.000 intron (NM_001024808, intron 4 of 5) intron (NM_001024808, intron 4 of 5) -17118 NR_135044 100506691 Hs.536336 NR_135044 ENSG00000256546 LOC100506691 - uncharacterized LOC100506691 ncRNA chr17-617 chr17 41638660 41638904 + 11.3 0.000 intron (NR_033415, intron 1 of 10) intron (NR_033415, intron 1 of 10) 1417 NR_033415 284116 Hs.725790 NR_033415 ENSG00000214514 KRT42P - keratin 42 pseudogene pseudo chr1-1399 chr1 155001940 155002184 + 11.3 0.000 promoter-TSS (NM_001256455) promoter-TSS (NM_001256455) -568 NR_046206 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr1-2669 chr1 230426615 230426859 + 11.3 0.000 promoter-TSS (NM_001258311) promoter-TSS (NM_001258311) -405 NM_001258311 79605 Hs.520463 NM_024554 ENSG00000177614 PGBD5 - piggyBac transposable element derived 5 protein-coding chr16-1062 chr16 8372642 8372886 + 11.3 0.000 Intergenic L1PA8|LINE|L1 217074 NM_001146336 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding chr18-206 chr18 57768654 57768898 + 11.3 0.000 intron (NM_005603, intron 1 of 27) intron (NM_005603, intron 1 of 27) 34539 NM_005603 5205 Hs.216623 NM_005603 ENSG00000081923 ATP8B1 ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1 ATPase phospholipid transporting 8B1 protein-coding chrX-443 chrX 44004101 44004345 + 11.3 0.000 Intergenic Intergenic -30833 NM_000266 4693 Hs.522615 NM_000266 ENSG00000124479 NDP EVR2|FEVR|ND norrin cystine knot growth factor NDP protein-coding chr12-763 chr12 95943060 95943304 + 11.3 0.000 promoter-TSS (NM_182496) promoter-TSS (NM_182496) -149 NM_152435 144193 Hs.424907 NM_152435 ENSG00000139344 AMDHD1 HMFT1272 amidohydrolase domain containing 1 protein-coding chr17-144 chr17 26940645 26940889 + 11.3 0.000 Intergenic (GAATG)n|Satellite|Satellite 148474 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA chr2-1054 chr2 240467687 240467931 + 11.3 0.000 3' UTR (NM_002081, exon 9 of 9) 3' UTR (NM_002081, exon 9 of 9) -11109 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA chr5-629 chr5 151678822 151679066 + 11.3 0.000 intron (NR_109873, intron 1 of 4) intron (NR_109873, intron 1 of 4) 1999 NR_109873 101927096 Hs.571023 NR_109873 ENSG00000249035 CLMAT3 CTB-113P19.1|SPARC-AS1 colorectal liver metastasis associated transcript 3 ncRNA chr10-992 chr10 54848380 54848624 + 11.3 0.000 intron (NM_001354404, intron 4 of 34) MSTC|LTR|ERVL-MaLR -47211 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding chr7-1116 chr7 73668478 73668722 + 11.3 0.000 intron (NM_001077621, intron 1 of 3) intron (NM_001077621, intron 1 of 3) 769 NM_001077621 155382 Hs.647037 NM_152560 ENSG00000176428 VPS37D WBSCR24 VPS37D subunit of ESCRT-I protein-coding chr20-605 chr20 44491576 44491820 + 11.3 0.000 3' UTR (NM_024331, exon 6 of 6) 3' UTR (NM_024331, exon 6 of 6) 15824 NM_001039199 79183 Hs.283869 NM_024331 ENSG00000124120 TTPAL C20orf121 alpha tocopherol transfer protein like protein-coding chr15-485 chr15 62145003 62145247 + 11.3 0.000 Intergenic Intergenic 20160 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding chr22-623 chr22 21959791 21960035 + 11.3 0.000 intron (NR_146277, intron 15 of 17) intron (NR_146277, intron 15 of 17) -7065 NM_014634 9647 Hs.112728 NM_014634 ENSG00000100034 PPM1F CAMKP|CaMKPase|FEM-2|POPX2|hFEM-2 protein phosphatase, Mg2+/Mn2+ dependent 1F protein-coding chr22-655 chr22 31276614 31276858 + 11.2 0.000 intron (NM_016733, intron 14 of 14) CpG 15752 NM_052880 113791 Hs.26670 NM_052880 ENSG00000100100 PIK3IP1 HGFL|TrIP|hHGFL(S) phosphoinositide-3-kinase interacting protein 1 protein-coding chr11-1416 chr11 9689080 9689324 + 11.2 0.000 intron (NM_015055, intron 1 of 11) intron (NM_015055, intron 1 of 11) 25125 NM_001297714 23075 Hs.153026 NM_015055 ENSG00000133789 SWAP70 HSPC321|SWAP-70 switching B cell complex subunit SWAP70 protein-coding chr20-536 chr20 11606381 11606625 + 11.2 0.000 Intergenic AluY|SINE|Alu 264212 NR_110635 728450 Hs.560990 NR_110635 ENSG00000228422 LINC00687 C20orf61|dJ1012F16.1 long intergenic non-protein coding RNA 687 ncRNA chr9-890 chr9 70419895 70420139 + 11.2 0.000 Intergenic CpG -5360 NM_001206 687 Hs.150557 NM_001206 ENSG00000119138 KLF9 BTEB|BTEB1 Kruppel like factor 9 protein-coding chr11-1292 chr11 59550289 59550533 + 11.2 0.000 Intergenic Intergenic 35498 NM_001004711 390199 Hs.553757 NM_001004711 ENSG00000172742 OR4D9 OR11-253 olfactory receptor family 4 subfamily D member 9 protein-coding chr19-687 chr19 23057839 23058083 + 11.2 0.000 intron (NR_110745, intron 4 of 7) AluSx|SINE|Alu 3304 NR_110745 101929144 Hs.531631 NR_110745 ENSG00000261615 LINC01858 - long intergenic non-protein coding RNA 1858 ncRNA chr1-2251 chr1 15919415 15919659 + 11.2 0.000 intron (NM_015001, intron 8 of 14) intron (NM_015001, intron 8 of 14) 56595 NM_001324137 7709 Hs.433764 NM_003443 ENSG00000116809 ZBTB17 MIZ-1|ZNF151|ZNF60|pHZ-67 zinc finger and BTB domain containing 17 protein-coding chr3-860 chr3 121744471 121744715 + 11.2 0.000 intron (NM_001256486, intron 1 of 21) AluJo|SINE|Alu 5148 NM_001256486 2804 Hs.213389 NM_004487 ENSG00000173230 GOLGB1 GCP|GCP372|GOLIM1 golgin B1 protein-coding chr6-315 chr6 56954811 56955055 + 11.2 0.000 promoter-TSS (NM_152731) promoter-TSS (NM_152731) -42 NM_001318539 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding chr1-1295 chr1 22349003 22349247 + 11.2 0.000 Intergenic AluSz|SINE|Alu 82886 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA chr19-1111 chr19 48059584 48059828 + 11.2 0.000 intron (NM_001159323, intron 14 of 16) MLT2B3|LTR|ERVL -1665 NR_132365 106144526 Hs.622570 NR_132363 ENSG00000269420 PLA2G4C-AS1 - PLA2G4C antisense RNA 1 ncRNA chr14-817 chr14 104980261 104980505 + 11.2 0.000 Intergenic Intergenic -2009 NM_138420 113146 Hs.441783 NM_138420 ENSG00000185567 AHNAK2 C14orf78 AHNAK nucleoprotein 2 protein-coding chr5-524 chr5 10458640 10458884 + 11.2 0.000 intron (NM_001201466, intron 4 of 5) intron (NM_001201466, intron 4 of 5) 16883 NM_001201466 83853 Hs.381089 NM_031916 ENSG00000145491 ROPN1L ASP|RSPH11 rhophilin associated tail protein 1 like protein-coding chr15-538 chr15 99286470 99286714 + 11.2 0.000 intron (NR_135754, intron 3 of 9) intron (NR_135754, intron 3 of 9) 29067 NR_073383 7190 Hs.656611 NR_073383 ENSG00000259706 HSP90B2P GRP94P1|GRP94b|HSP|HSPCP2|TRA1P1|TRAP1 heat shock protein 90 beta family member 2, pseudogene pseudo chr17-1243 chr17 11557705 11557949 + 11.2 0.000 exon (NM_001173461, exon 4 of 4) exon (NM_001173461, exon 4 of 4) -40643 NM_001372 1770 Hs.567259 NM_001372 ENSG00000007174 DNAH9 CILD40|DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20 dynein axonemal heavy chain 9 protein-coding chr19-1526 chr19 13116763 13117007 + 11.2 0.000 promoter-TSS (NM_001351761) promoter-TSS (NM_001351761) -114 NM_001136035 55621 Hs.515169 NM_017722 ENSG00000104907 TRMT1 MRT68|TRM1 tRNA methyltransferase 1 protein-coding chr19-680 chr19 15798626 15798870 + 11.2 0.000 Intergenic L2a|LINE|L2 4699 NM_001004466 284433 Hs.553676 NM_001004466 ENSG00000172519 OR10H5 OR19-25|OR19-26 olfactory receptor family 10 subfamily H member 5 protein-coding chr1-2269 chr1 19373496 19373740 + 11.2 0.000 TTS (NM_001313932) TTS (NM_001313932) 61292 NR_109848 54896 Hs.647620 NM_017765 ENSG00000040487 SLC66A1 LAAT-1|LAAT1|PQLC2 solute carrier family 66 member 1 protein-coding chr7-1319 chr7 75442510 75442754 + 11.2 0.000 intron (NM_001099415, intron 3 of 14) CpG 32310 NR_033322 155400 Hs.436034 NM_001039575 ENSG00000223705 NSUN5P1 NSUN5B|WBSCR20B NSUN5 pseudogene 1 pseudo chr12-524 chr12 54488111 54488355 + 11.2 0.000 Intergenic SVA_D|Retroposon|SVA -9519 NM_005337 3071 Hs.182014 NM_005337 ENSG00000123338 NCKAP1L HEM1 NCK associated protein 1 like protein-coding chr6-510 chr6 43269783 43270027 + 11.2 0.000 intron (NM_032538, intron 13 of 14) CpG 26424 NM_032538 84630 Hs.485436 NM_032538 ENSG00000146216 TTBK1 BDTK tau tubulin kinase 1 protein-coding chr5-660 chr5 43377432 43377676 + 11.2 0.000 intron (NM_001301873, intron 3 of 3) intron (NM_001301873, intron 3 of 3) 19583 NM_001301875 56477 Hs.656904 NM_019846 ENSG00000151882 CCL28 CCK1|MEC|SCYA28 C-C motif chemokine ligand 28 protein-coding chr16-509 chr16 7778999 7779243 + 11.2 0.000 Intergenic Intergenic 446276 NM_145892 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding chr2-1761 chr2 95315113 95315357 + 11.2 0.000 intron (NM_013434, intron 2 of 8) intron (NM_013434, intron 2 of 8) 17888 NM_013434 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding chr9-611 chr9 127225260 127225504 + 11.2 0.000 Intergenic CpG -38280 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr5-671 chr5 102755131 102755375 + 11.2 0.000 promoter-TSS (NM_001364593) promoter-TSS (NM_001364593) -52 NM_001364589 5066 Hs.369430 NM_000919 ENSG00000145730 PAM PAL|PHM peptidylglycine alpha-amidating monooxygenase protein-coding chr16-719 chr16 30123002 30123246 + 11.2 0.000 promoter-TSS (NM_002746) promoter-TSS (NM_002746) 96 NM_001040056 5595 Hs.861 NM_002746 ENSG00000102882 MAPK3 ERK-1|ERK1|ERT2|HS44KDAP|HUMKER1A|P44ERK1|P44MAPK|PRKM3|p44-ERK1|p44-MAPK mitogen-activated protein kinase 3 protein-coding KI270442.1-8 KI270442.1 171299 171543 + 11.2 0.000 NA NA NA NA chr11-1562 chr11 69123588 69123832 + 11.2 0.000 Intergenic Intergenic -32225 NR_161183 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding chr17-857 chr17 39545454 39545698 + 11.2 0.000 Intergenic AluSx1|SINE|Alu 62344 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr12-884 chr12 103153824 103154068 + 11.2 0.000 intron (NR_126333, intron 1 of 6) L1ME3A|LINE|L1 2104 NR_126333 101929058 Hs.171310 NR_126333 ENSG00000257860 LOC101929058 - uncharacterized LOC101929058 ncRNA chr6-1098 chr6 152530253 152530497 + 11.2 0.000 intron (NM_182961, intron 4 of 145) intron (NM_182961, intron 4 of 145) 106476 NM_033071 23345 Hs.12967 NM_015293 ENSG00000131018 SYNE1 8B|ARCA1|C6orf98|CPG2|EDMD4|KASH1|MYNE1|Nesp1|SCAR8|dJ45H2.2 spectrin repeat containing nuclear envelope protein 1 protein-coding chr8-454 chr8 121212118 121212362 + 11.2 0.000 Intergenic Intergenic -400194 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding chr2-969 chr2 101475023 101475267 + 11.2 0.000 promoter-TSS (NM_001145664) promoter-TSS (NM_001145664) -33 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding chr1-1682 chr1 21782635 21782879 + 11.2 0.000 intron (NM_001350167, intron 1 of 26) CpG 392 NM_001350164 84196 Hs.467524 NM_032236 ENSG00000090686 USP48 RAP1GA1|USP31 ubiquitin specific peptidase 48 protein-coding chr1-1211 chr1 191308842 191309086 + 11.2 0.000 Intergenic AluSx1|SINE|Alu -80466 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA chr13-411 chr13 110222065 110222309 + 11.2 0.000 intron (NM_001845, intron 2 of 51) intron (NM_001845, intron 2 of 51) 84970 NM_001845 1282 Hs.17441 NM_001845 ENSG00000187498 COL4A1 BSVD|BSVD1|RATOR collagen type IV alpha 1 chain protein-coding chr16-1150 chr16 67208432 67208676 + 11.2 0.000 intron (NM_001004055, intron 3 of 6) intron (NM_001004055, intron 3 of 6) -6159 NR_029887 442901 NR_029887 ENSG00000207948 MIR328 MIRN328|hsa-mir-328|mir-328 microRNA 328 ncRNA chr10-1325 chr10 126350383 126350627 + 11.2 0.000 intron (NM_001288974, intron 1 of 18) intron (NM_001288974, intron 1 of 18) 37972 NM_001288975 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding chr7-1159 chr7 143362403 143362647 + 11.2 0.000 promoter-TSS (NM_001371249) promoter-TSS (NM_001371249) 188 NM_001371248 chr19-1128 chr19 498521 498765 + 11.2 0.000 exon (NM_130762, exon 3 of 4) exon (NM_130762, exon 3 of 4) 2157 NM_130760 8174 Hs.102598 NM_130760 ENSG00000099866 MADCAM1 MACAM1 mucosal vascular addressin cell adhesion molecule 1 protein-coding GL000219.1-3 GL000219.1 50879 51123 + 11.2 0.000 NA NA NA NA chr3-1384 chr3 119258089 119258333 + 11.2 0.000 intron (NR_046574, intron 3 of 3) MER57D|LTR|ERV1 -17333 NM_212543 8702 Hs.13225 NM_003778 ENSG00000121578 B4GALT4 B4Gal-T4|beta4Gal-T4 beta-1,4-galactosyltransferase 4 protein-coding chr22-605 chr22 11629329 11629573 + 11.2 0.000 Intergenic CpG -267955 NR_110761 102723769 Hs.652926 NR_110761 LOC102723769 - uncharacterized LOC102723769 ncRNA chr4-914 chr4 7938748 7938992 + 11.2 0.000 promoter-TSS (NM_203423) promoter-TSS (NM_203423) -131 NM_203423 389199 Hs.375210 NM_203423 LOC389199 - uncharacterized LOC389199 protein-coding chr12-355 chr12 122422601 122422845 + 11.2 0.000 promoter-TSS (NM_001247997) promoter-TSS (NM_001247997) -54 NM_198240 6249 Hs.524809 NM_002956 ENSG00000130779 CLIP1 CLIP|CLIP-170|CLIP170|CYLN1|RSN CAP-Gly domain containing linker protein 1 protein-coding chr3-1360 chr3 105997983 105998227 + 11.2 0.000 Intergenic L1MA2|LINE|L1 -128704 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chr4-477 chr4 146585651 146585895 + 11.2 0.000 Intergenic Intergenic -53120 NM_004575 5458 Hs.266 NM_004575 ENSG00000151615 POU4F2 BRN3.2|BRN3B|Brn-3b POU class 4 homeobox 2 protein-coding chr22-444 chr22 37036105 37036349 + 11.2 0.000 Intergenic Intergenic -15509 NM_001282684 79734 Hs.517597 NM_024681 ENSG00000100379 KCTD17 - potassium channel tetramerization domain containing 17 protein-coding chr7-718 chr7 41700586 41700830 + 11.2 0.000 intron (NM_002192, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 2382 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding chr14-618 chr14 49173728 49173972 + 11.2 0.000 Intergenic L1MA8|LINE|L1 412530 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding chr4-203 chr4 49632779 49633023 + 11.2 0.000 Intergenic (GAATG)n|Satellite|Satellite 646259 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chrX-292 chrX 44873749 44873993 + 11.2 0.000 intron (NR_111960, intron 1 of 27) CpG 696 NM_001291416 7403 Hs.522616 NM_021140 ENSG00000147050 KDM6A KABUK2|UTX|bA386N14.2 lysine demethylase 6A protein-coding chr20-600 chr20 41047956 41048200 + 11.2 0.000 intron (NM_003286, intron 2 of 20) intron (NM_003286, intron 2 of 20) 19256 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding chr17-1373 chr17 63533848 63534092 + 11.2 0.000 exon (NM_001278919, exon 5 of 13) exon (NM_001278919, exon 5 of 13) 10612 NM_001278920 81033 Hs.591177 NM_030779 ENSG00000173826 KCNH6 ERG-2|ERG2|HERG2|Kv11.2|hERG-2 potassium voltage-gated channel subfamily H member 6 protein-coding chr12-1089 chr12 47978594 47978838 + 11.2 0.000 exon (NM_001844, exon 42 of 54) exon (NM_001844, exon 42 of 54) 15120 NM_001143842 79022 Hs.596726 NM_024056 ENSG00000134291 TMEM106C - transmembrane protein 106C protein-coding chr10-1344 chr10 132886829 132887073 + 11.2 0.000 intron (NM_001200049, intron 25 of 57) intron (NM_001200049, intron 25 of 57) 55619 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr18-338 chr18 49814202 49814446 + 11.2 0.000 promoter-TSS (NM_006111) promoter-TSS (NM_006111) 301 NR_117096 103091864 Hs.646459 NR_117096 ENSG00000267322 SNHG22 SCARNA17|SCARNA17HG small nucleolar RNA host gene 22 ncRNA chr8-1009 chr8 144041736 144041980 + 11.2 0.000 intron (NM_198572, intron 4 of 4) intron (NM_198572, intron 4 of 4) -7540 NR_158554 392275 NR_158554 SMPD5 MA-nSMase sphingomyelin phosphodiesterase 5 pseudo chr2-345 chr2 150596358 150596602 + 11.2 0.000 Intergenic Intergenic -24259 NR_110241 101929260 Hs.732324 NR_110241 ENSG00000236049 LINC01920 - long intergenic non-protein coding RNA 1920 ncRNA chr6-324 chr6 98947542 98947786 + 11.2 0.000 intron (NM_001278716, intron 1 of 9) CpG 282 NR_103836 26235 Hs.536850 NM_012160 ENSG00000112234 FBXL4 FBL4|FBL5|MTDPS13 F-box and leucine rich repeat protein 4 protein-coding chr11-1372 chr11 199340 199584 + 11.2 0.000 exon (NM_053280, exon 6 of 7) exon (NM_053280, exon 6 of 7) 2701 NM_001286136 113746 Hs.350949 NM_053280 ENSG00000177947 ODF3 CT135|SHIPPO1|TISP50 outer dense fiber of sperm tails 3 protein-coding chr16-723 chr16 35619280 35619524 + 11.2 0.000 Intergenic Harlequin-int|LTR|ERV1 -112232 NR_034018 100130700 Hs.97712 NR_034018 TP53TG3HP - TP53 target 3 family member H, pseudogene pseudo chr13-425 chr13 20392103 20392347 + 11.2 0.000 Intergenic CpG 41621 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA chr10-129 chr10 48812062 48812306 + 11.2 0.000 intron (NM_020945, intron 30 of 61) AluSx1|SINE|Alu 102051 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding chr2-1730 chr2 73156498 73156742 + 11.2 0.000 Intergenic L2|LINE|L2 -43672 NM_001371272 chr19-1473 chr19 5066970 5067214 + 11.2 0.000 intron (NM_001370094, intron 6 of 10) intron (NM_001370094, intron 6 of 10) 97979 NM_001370094 23030 Hs.654816 NM_015015 ENSG00000127663 KDM4B JMJD2B|TDRD14B lysine demethylase 4B protein-coding chr4-588 chr4 16863452 16863696 + 11.2 0.000 intron (NM_001304435, intron 1 of 7) MLT1J2|LTR|ERVL-MaLR 35071 NM_001290 9079 Hs.714330 NM_001290 ENSG00000169744 LDB2 CLIM1|LDB-2|LDB1 LIM domain binding 2 protein-coding chr12-853 chr12 66302158 66302402 + 11.2 0.000 promoter-TSS (NR_135080) promoter-TSS (NR_135080) -213 NM_001370285 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr2-1432 chr2 3295957 3296201 + 11.2 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 81739 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr1-1699 chr1 26826540 26826784 + 11.2 0.000 promoter-TSS (NM_032283) promoter-TSS (NM_032283) -26 NM_032283 84243 Hs.523710 NM_032283 ENSG00000204160 ZDHHC18 DHHC-18|DHHC18 zinc finger DHHC-type containing 18 protein-coding chr2-1955 chr2 227433612 227433856 + 11.2 0.000 Intergenic MSTB|LTR|ERVL-MaLR -38398 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA chr9-1171 chr9 6552646 6552890 + 11.2 0.000 intron (NM_000170, intron 20 of 24) intron (NM_000170, intron 20 of 24) 92924 NM_000170 2731 Hs.584238 NM_000170 ENSG00000178445 GLDC GCE|GCSP|HYGN1 glycine decarboxylase protein-coding chr1-1420 chr1 183268121 183268365 + 11.2 0.000 intron (NM_170706, intron 8 of 10) intron (NM_170706, intron 8 of 10) 36631 NM_170706 23057 Hs.497123 NM_015039 ENSG00000157064 NMNAT2 C1orf15|PNAT2 nicotinamide nucleotide adenylyltransferase 2 protein-coding chr1-1721 chr1 32901209 32901453 + 11.0 0.000 promoter-TSS (NM_033504) promoter-TSS (NM_033504) 58 NM_001329723 113452 Hs.534521 NM_033504 ENSG00000121900 TMEM54 BCLP|CAC-1|CAC1 transmembrane protein 54 protein-coding chr9-1360 chr9 130579712 130579956 + 11.0 0.000 promoter-TSS (NR_027440) promoter-TSS (NR_027440) 257 NM_003934 8939 Hs.98751 NM_003934 ENSG00000107164 FUBP3 FBP3 far upstream element binding protein 3 protein-coding chr5-1018 chr5 42836306 42836550 + 11.0 0.000 Intergenic LTR12C|LTR|ERV1 -24352 NM_001085486 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding chr2-1645 chr2 27735580 27735824 + 11.0 0.000 intron (NR_160725, intron 2 of 2) CpG 19579 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr22-196 chr22 30431776 30432020 + 11.0 0.000 promoter-TSS (NR_148046) promoter-TSS (NR_148046) -788 NR_148046 105372990 Hs.565803 NR_148046 LOC105372990 - uncharacterized LOC105372990 ncRNA chrY-24 chrY 11327543 11327787 + 11.0 0.000 Intergenic BSR/Beta|Satellite|Satellite 1093925 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo chr9-642 chr9 32378677 32378921 + 11.0 0.000 Intergenic Intergenic -5804 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr10-1248 chr10 99329163 99329407 + 11.0 0.000 promoter-TSS (NM_020348) promoter-TSS (NM_020348) -71 NM_020348 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding chr11-814 chr11 73936508 73936752 + 11.0 0.000 Intergenic SVA_D|Retroposon|SVA -13689 NM_153614 374407 Hs.567888 NM_153614 ENSG00000187726 DNAJB13 CILD34|RSPH16A|TSARG5|TSARG6 DnaJ heat shock protein family (Hsp40) member B13 protein-coding chr7-440 chr7 155408256 155408500 + 11.0 0.000 Intergenic Intergenic 26302 NR_147174 100286906 Hs.568111 NR_147174 LOC100286906 - uncharacterized LOC100286906 ncRNA chr15-698 chr15 75843716 75843960 + 11.0 0.000 promoter-TSS (NM_001145335) promoter-TSS (NM_001145335) -206 NM_001145335 92912 Hs.23033 NM_173469 ENSG00000140367 UBE2Q2 - ubiquitin conjugating enzyme E2 Q2 protein-coding chr16-1022 chr16 1035001 1035245 + 11.0 0.000 Intergenic Intergenic -37633 NM_001172560 6755 Hs.449840 NM_001053 ENSG00000162009 SSTR5 SS-5-R somatostatin receptor 5 protein-coding chr3-1018 chr3 129413843 129414087 + 11.0 0.000 intron (NM_207307, intron 4 of 8) Charlie20a|DNA|hAT-Charlie -14526 NR_003111 132241 Hs.477537 NR_003111 ENSG00000251474 RPL32P3 - ribosomal protein L32 pseudogene 3 pseudo chr7-1454 chr7 157276882 157277126 + 11.0 0.000 Intergenic Intergenic -60000 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr8-358 chr8 120124236 120124480 + 11.0 0.000 promoter-TSS (NM_021110) promoter-TSS (NM_021110) -744 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding chrX-223 chrX 130075212 130075456 + 11.0 0.000 intron (NM_001127197, intron 2 of 8) AluY|SINE|Alu 35166 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr11-991 chr11 59810635 59810879 + 11.0 0.000 promoter-TSS (NM_017840) promoter-TSS (NM_017840) 21 NM_017840 54948 Hs.530734 NM_017840 ENSG00000166902 MRPL16 L16mt|MRP-L16|PNAS-111 mitochondrial ribosomal protein L16 protein-coding chr11-986 chr11 36362106 36362350 + 11.0 0.000 intron (NM_001160167, intron 1 of 8) intron (NM_001160167, intron 1 of 8) -13757 NM_001160168 79899 Hs.19987 NM_024841 ENSG00000135362 PRR5L PROTOR2 proline rich 5 like protein-coding chr1-2577 chr1 182340412 182340656 + 11.0 0.000 Intergenic Intergenic -26473 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA chr15-527 chr15 88649592 88649836 + 11.0 0.000 intron (NM_001303237, intron 2 of 3) intron (NM_001303237, intron 2 of 3) 10698 NM_001303237 3669 Hs.459265 NM_002201 ENSG00000172183 ISG20 CD25|HEM45 interferon stimulated exonuclease gene 20 protein-coding chr8-823 chr8 23019691 23019935 + 11.0 0.000 TTS (NM_003842) TTS (NM_003842) 20234 NM_015178 23221 Hs.372688 NM_015178 ENSG00000008853 RHOBTB2 DBC2|EIEE64 Rho related BTB domain containing 2 protein-coding chr2-1395 chr2 231395416 231395660 + 11.0 0.000 promoter-TSS (NM_145236) promoter-TSS (NM_145236) -172 NM_145236 93010 Hs.299329 NM_145236 ENSG00000156966 B3GNT7 beta3GnT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 protein-coding chr10-1240 chr10 97634680 97634924 + 11.0 0.000 promoter-TSS (NM_001098831) promoter-TSS (NM_001098831) -646 NM_001098831 118812 Hs.217409 NM_178832 ENSG00000171160 MORN4 C10orf83|UTA|bA548K23.4|rtp MORN repeat containing 4 protein-coding chr19-875 chr19 18650563 18650807 + 11.0 0.000 intron (NM_001345983, intron 1 of 2) CpG 6047 NM_001345983 55295 Hs.250632 NM_018316 ENSG00000167487 KLHL26 - kelch like family member 26 protein-coding chr1-1245 chr1 1420243 1420487 + 11.0 0.000 exon (NM_001145210, exon 3 of 4) exon (NM_001145210, exon 3 of 4) 911 NM_001243536 441869 Hs.381222 NM_001145210 ENSG00000235098 ANKRD65 - ankyrin repeat domain 65 protein-coding chr13-295 chr13 90839374 90839618 + 11.0 0.000 Intergenic Intergenic 87101 NR_027039 144776 Hs.434120 NR_027039 ENSG00000231674 LINC00410 - long intergenic non-protein coding RNA 410 ncRNA KI270442.1-5 KI270442.1 57980 58224 + 11.0 0.000 NA NA NA NA chr22-467 chr22 17774350 17774594 + 11.0 0.000 promoter-TSS (NM_001244570) promoter-TSS (NM_001244570) 23 NM_001244570 637 Hs.591054 NM_001196 ENSG00000015475 BID FP497 BH3 interacting domain death agonist protein-coding chr7-1357 chr7 100966214 100966458 + 11.0 0.000 intron (NM_005960, intron 8 of 11) intron (NM_005960, intron 8 of 11) -3287 NM_001164462 10071 Hs.489355 NM_001164462 ENSG00000205277 MUC12 MUC-11|MUC-12|MUC11 mucin 12, cell surface associated protein-coding chr20-539 chr20 15576452 15576696 + 11.0 0.000 intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 346740 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA chr11-502 chr11 61752305 61752549 + 11.0 0.000 promoter-TSS (NM_001127392) promoter-TSS (NM_001127392) -209 NM_001127392 745 Hs.473109 NM_013279 ENSG00000124920 MYRF 11orf9|C11orf9|CUGS|MMERV|MRF|Ndt80|pqn-47 myelin regulatory factor protein-coding chr2-1815 chr2 127087631 127087875 + 11.0 0.000 intron (NM_001320633, intron 1 of 14) intron (NM_001320633, intron 1 of 14) -3203 NM_001320642 274 Hs.193163 NM_004305 ENSG00000136717 BIN1 AMPH2|AMPHL|CNM2|SH3P9 bridging integrator 1 protein-coding chr1-2298 chr1 24959155 24959399 + 11.0 0.000 intron (NM_001320672, intron 2 of 6) intron (NM_001320672, intron 2 of 6) 5733 NM_001320672 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding chr19-1394 chr19 49483830 49484074 + 11.0 0.000 intron (NM_001459, intron 8 of 8) AluSc|SINE|Alu -3602 NR_073024 23521 Hs.523185 NM_012423 ENSG00000142541 RPL13A L13A|TSTA1 ribosomal protein L13a protein-coding chr9-1012 chr9 134624426 134624670 + 11.0 0.000 Intergenic Intergenic -17257 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding chr12-433 chr12 103681402 103681646 + 11.0 0.000 intron (NM_017564, intron 25 of 68) MLT1C|LTR|ERVL-MaLR 94251 NM_017564 55576 Hs.408249 NM_017564 ENSG00000136011 STAB2 FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1 stabilin 2 protein-coding chr16-642 chr16 28620458 28620702 + 11.0 0.000 intron (NM_177536, intron 1 of 5) AluJb|SINE|Alu 3006 NM_177536 6817 Hs.567342 NM_001055 ENSG00000196502 SULT1A1 HAST1/HAST2|P-PST|PST|ST1A1|ST1A3|STP|STP1|TSPST1 sulfotransferase family 1A member 1 protein-coding chr15-444 chr15 90884034 90884278 + 11.0 0.000 promoter-TSS (NM_001143785) promoter-TSS (NM_001143785) -348 NM_001143785 2242 Hs.7636 NM_002005 ENSG00000182511 FES FPS FES proto-oncogene, tyrosine kinase protein-coding chr3-1311 chr3 55481264 55481508 + 11.0 0.000 promoter-TSS (NM_001256105) promoter-TSS (NM_001256105) 12 NM_001256105 7474 Hs.643085 NM_003392 ENSG00000114251 WNT5A hWNT5A Wnt family member 5A protein-coding chr17-1345 chr17 57028610 57028854 + 11.0 0.000 Intergenic MSTA|LTR|ERVL-MaLR -16746 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo chr1-2685 chr1 242781990 242782234 + 11.0 0.000 Intergenic AluSp|SINE|Alu -257415 NM_001320272 200150 Hs.672452 NM_152666 ENSG00000180287 PLD5 PLDC phospholipase D family member 5 protein-coding chr20-648 chr20 62223304 62223548 + 11.0 0.000 Intergenic ERV3-16A3_I-int|LTR|ERVL -3148 NM_007232 11255 Hs.251399 NM_007232 ENSG00000101180 HRH3 GPCR97|HH3R histamine receptor H3 protein-coding chr21-270 chr21 46120538 46120782 + 11.0 0.000 intron (NM_058174, intron 16 of 27) intron (NM_058174, intron 16 of 27) 22541 NM_058175 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr6-818 chr6 72002151 72002395 + 11.0 0.000 intron (NM_001350411, intron 2 of 3) intron (NM_001350411, intron 2 of 3) 115570 NM_001350411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding chr12-771 chr12 108901113 108901357 + 11.0 0.000 TTS (NM_001917) TTS (NM_001917) 21143 NM_001917 1610 Hs.113227 NM_001917 ENSG00000110887 DAO DAAO|DAMOX|OXDA D-amino acid oxidase protein-coding chr4-711 chr4 84965705 84965949 + 11.0 0.000 promoter-TSS (NR_015359) promoter-TSS (NR_015359) 211 NR_152774 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA chr20-518 chr20 2751896 2752140 + 11.0 0.000 intron (NM_001110514, intron 13 of 17) CpG-17377 48609 NM_019609 56265 Hs.659346 NM_019609 ENSG00000088882 CPXM1 CPX1|CPXM carboxypeptidase X, M14 family member 1 protein-coding chr2-1766 chr2 96500642 96500886 + 11.0 0.000 non-coding (NR_104346, exon 2 of 4) non-coding (NR_104346, exon 2 of 4) 4593 NM_001285485 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding chr11-1446 chr11 33690855 33691099 + 11.0 0.000 Intergenic Intergenic 9763 NM_001166692 100131378 Hs.709466 NM_001166692 ENSG00000205177 C11orf91 - chromosome 11 open reading frame 91 protein-coding chr3-1388 chr3 122679440 122679684 + 11.0 0.000 Intergenic Intergenic -1277 NM_017554 54625 Hs.518203 NM_017554 ENSG00000173193 PARP14 ARTD8|BAL2|PARP-14|pART8 poly(ADP-ribose) polymerase family member 14 protein-coding chr19-1412 chr19 982664 982908 + 11.0 0.000 Intergenic CpG -1542 NM_024100 57418 Hs.325321 NM_024100 ENSG00000065268 WDR18 Ipi3|R32184_1 WD repeat domain 18 protein-coding chr3-1204 chr3 4303340 4303584 + 11.0 0.000 exon (NM_006515, exon 1 of 3) exon (NM_006515, exon 1 of 3) 158 NM_006515 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding chr4-796 chr4 6371049 6371293 + 11.0 0.000 intron (NM_001206994, intron 6 of 9) MIRc|SINE|MIR 10697 NM_181876 5522 Hs.479069 NM_020416 ENSG00000074211 PPP2R2C B55-GAMMA|B55gamma|IMYPNO|IMYPNO1|PR52|PR55G protein phosphatase 2 regulatory subunit Bgamma protein-coding chr7-1438 chr7 147198077 147198321 + 11.0 0.000 intron (NM_014141, intron 7 of 22) intron (NM_014141, intron 7 of 22) -100590 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr19-1374 chr19 42069948 42070192 + 11.0 0.000 intron (NM_001330519, intron 1 of 1) intron (NM_001330519, intron 1 of 1) 1593 NM_001330519 64763 Hs.13323 NM_022752 ENSG00000105732 ZNF574 FP972 zinc finger protein 574 protein-coding chr15-504 chr15 70492724 70492968 + 11.0 0.000 Intergenic Intergenic 13082 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA chr2-1726 chr2 70112318 70112562 + 11.0 0.000 Intergenic Intergenic 12876 NR_024444 100133985 Hs.135528 NR_024444 ENSG00000231327 LINC01816 - long intergenic non-protein coding RNA 1816 ncRNA chr22-671 chr22 36419316 36419560 + 11.0 0.000 Intergenic Intergenic -31371 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding chr12-1134 chr12 56241457 56241701 + 11.0 0.000 3' UTR (NM_173595, exon 28 of 28) 3' UTR (NM_173595, exon 28 of 28) 10862 NM_001135195 283375 Hs.591018 NM_173596 ENSG00000139540 SLC39A5 LZT-Hs7|MYP24|ZIP5 solute carrier family 39 member 5 protein-coding chr22-426 chr22 50562828 50563072 + 11.0 0.000 promoter-TSS (NM_001123225) promoter-TSS (NM_001123225) -31 NM_001123225 644186 Hs.535660 NM_001123225 ENSG00000217442 SYCE3 C22orf41|THEG2 synaptonemal complex central element protein 3 protein-coding chr17-1005 chr17 57935611 57935855 + 10.9 0.000 intron (NM_001271875, intron 1 of 10) intron (NM_001271875, intron 1 of 10) 19679 NM_001271875 404093 Hs.46679 NM_001271875 ENSG00000180891 CUEDC1 - CUE domain containing 1 protein-coding chr22-612 chr22 19041005 19041249 + 10.9 0.000 exon (NM_001173534, exon 8 of 9) exon (NM_001173534, exon 8 of 9) 7248 NR_024157 25786 Hs.720269 NR_024157 ENSG00000273311 DGCR11 DGS-D DiGeorge syndrome critical region gene 11 ncRNA chr4-740 chr4 120922345 120922589 + 10.9 0.000 intron (NM_001300824, intron 1 of 13) CpG 399 NM_001300824 11107 Hs.666782 NM_018699 ENSG00000138738 PRDM5 BCS2|PFM2 PR/SET domain 5 protein-coding chr15-663 chr15 62758116 62758360 + 10.9 0.000 intron (NM_015059, intron 34 of 55) intron (NM_015059, intron 34 of 55) -65719 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA chr20-492 chr20 38134632 38134876 + 10.9 0.000 intron (NM_004613, intron 10 of 12) G-rich|Low_complexity|Low_complexity 30516 NM_004613 7052 Hs.517033 NM_004613 ENSG00000198959 TGM2 TG(C)|TGC transglutaminase 2 protein-coding chr4-932 chr4 21501165 21501409 + 10.9 0.000 intron (NM_147182, intron 2 of 8) intron (NM_147182, intron 2 of 8) -36529 NR_107018 102465859 NR_107018 ENSG00000283281 MIR7978 hsa-mir-7978 microRNA 7978 ncRNA chr6-761 chr6 161182084 161182328 + 10.9 0.000 intron (NM_020133, intron 2 of 8) intron (NM_020133, intron 2 of 8) -20224 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA chr7-562 chr7 43758713 43758957 + 10.9 0.000 intron (NM_000712, intron 1 of 7) CpG 155 NM_000712 644 Hs.488143 NM_000712 ENSG00000106605 BLVRA BLVR|BVR|BVRA biliverdin reductase A protein-coding chr17-1115 chr17 17503580 17503824 + 10.9 0.000 Intergenic G-rich|Low_complexity|Low_complexity -7307 NM_001199989 51655 Hs.25829 NM_016084 ENSG00000108551 RASD1 AGS1|DEXRAS1|MGC:26290 ras related dexamethasone induced 1 protein-coding chr3-1315 chr3 57551819 57552063 + 10.9 0.000 Intergenic FLAM_C|SINE|Alu -4333 NM_001322177 201626 Hs.572993 NM_177966 ENSG00000174840 PDE12 2'-PDE|2-PDE phosphodiesterase 12 protein-coding chr5-1000 chr5 31639019 31639263 + 10.9 0.000 promoter-TSS (NM_178140) promoter-TSS (NM_178140) 10 NM_178140 23037 Hs.481819 NM_015022 ENSG00000133401 PDZD2 AIPC|PAPIN|PDZK3|PIN1 PDZ domain containing 2 protein-coding chr13-293 chr13 85797035 85797279 + 10.9 0.000 intron (NM_032229, intron 1 of 1) (TA)n|Simple_repeat|Simple_repeat 2262 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding chr9-508 chr9 33750556 33750800 + 10.9 0.000 promoter-TSS (NM_001197098) promoter-TSS (NM_001197098) -143 NM_001197098 5646 Hs.654513 NM_002771 ENSG00000010438 PRSS3 MTG|PRSS4|T9|TRY3|TRY4 serine protease 3 protein-coding chr10-1012 chr10 72929435 72929679 + 10.9 0.000 intron (NM_152635, intron 7 of 8) AluJb|SINE|Alu 25249 NM_032562 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding chr3-599 chr3 100185975 100186219 + 10.9 0.000 intron (NR_028357, intron 1 of 2) intron (NR_028357, intron 1 of 2) 273 NR_028357 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo chr7-1455 chr7 157336806 157337050 + 10.9 0.000 promoter-TSS (NM_001363676) promoter-TSS (NM_001363676) -76 NM_001363676 10049 Hs.490745 NM_005494 ENSG00000105993 DNAJB6 DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 DnaJ heat shock protein family (Hsp40) member B6 protein-coding chr3-771 chr3 130002994 130003238 + 10.9 0.000 Intergenic CpG 28396 NM_007117 7200 Hs.182231 NM_007117 ENSG00000170893 TRH Pro-TRH|TRF thyrotropin releasing hormone protein-coding chr9-788 chr9 95610598 95610842 + 10.9 0.000 Intergenic Intergenic -93663 NM_001354919 5727 Hs.494538 NM_000264 ENSG00000185920 PTCH1 BCNS|NBCCS|PTC|PTC1|PTCH patched 1 protein-coding chr5-963 chr5 180637277 180637521 + 10.9 0.000 intron (NM_002020, intron 1 of 29) intron (NM_002020, intron 1 of 29) 12201 NM_001354989 2324 Hs.646917 NM_002020 ENSG00000037280 FLT4 FLT-4|FLT41|LMPH1A|LMPHM1|PCL|VEGFR-3|VEGFR3 fms related tyrosine kinase 4 protein-coding chr14-442 chr14 100873250 100873494 + 10.9 0.000 Intergenic Intergenic -1121 NR_029889 442905 NR_029889 ENSG00000199151 MIR337 MIRN337|hsa-mir-337|mir-337 microRNA 337 ncRNA chr2-1035 chr2 226791717 226791961 + 10.9 0.000 intron (NM_005544, intron 1 of 1) CpG 6951 NM_005544 3667 Hs.471508 NM_005544 ENSG00000169047 IRS1 HIRS-1 insulin receptor substrate 1 protein-coding chrX-212 chrX 93230951 93231195 + 10.9 0.000 Intergenic L2a|LINE|L2 -406170 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr6-729 chr6 133907498 133907742 + 10.9 0.000 Intergenic LTR78B|LTR|ERV1 18498 NM_003206 6943 Hs.78061 NM_003206 ENSG00000118526 TCF21 POD1|bHLHa23 transcription factor 21 protein-coding chr14-579 chr14 94771213 94771457 + 10.9 0.000 non-coding (NR_144432, exon 1 of 2) non-coding (NR_144432, exon 1 of 2) 693 NR_144432 108868751 NR_144432 GSC-DT DIGIT GSC divergent transcript ncRNA chr13-284 chr13 44138142 44138386 + 10.9 0.000 intron (NR_132368, intron 1 of 3) AluJr|SINE|Alu -4064 NR_104064 101929212 Hs.534877 NR_104064 ENSG00000227258 SMIM2-AS1 C13orf44-AS1|C3orf81-AS1 SMIM2 antisense RNA 1 ncRNA chr18-292 chr18 2655716 2655960 + 10.9 0.000 promoter-TSS (NM_015295) promoter-TSS (NM_015295) -49 NM_015295 23347 Hs.8118 NM_015295 ENSG00000101596 SMCHD1 BAMS|FSHD2 structural maintenance of chromosomes flexible hinge domain containing 1 protein-coding chr17-1311 chr17 42458641 42458885 + 10.9 0.000 promoter-TSS (NM_001130020) promoter-TSS (NM_001130020) -115 NM_005177 535 Hs.463074 NM_005177 ENSG00000033627 ATP6V0A1 ATP6N1|ATP6N1A|Stv1|VPP1|Vph1|a1 ATPase H+ transporting V0 subunit a1 protein-coding chr9-1394 chr9 135499835 135500079 + 10.9 0.000 promoter-TSS (NM_016034) promoter-TSS (NM_016034) -8 NM_001371401 chr1-2478 chr1 112358896 112359140 + 10.9 0.000 Intergenic Intergenic -37196 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding chr11-912 chr11 65744576 65744820 + 10.9 0.000 Intergenic MER52A|LTR|ERV1 -23760 NM_032193 84153 Hs.718438 NM_032193 ENSG00000172922 RNASEH2C AGS3|AYP1 ribonuclease H2 subunit C protein-coding chr14-410 chr14 52752968 52753212 + 10.9 0.000 intron (NM_001130701, intron 5 of 11) AluSg7|SINE|Alu 22924 NM_001130701 6815 Hs.364980 NM_145251 ENSG00000198252 STYX - serine/threonine/tyrosine interacting protein protein-coding chr12-665 chr12 68816183 68816427 + 10.9 0.000 intron (NM_001145340, intron 3 of 4) intron (NM_001145340, intron 3 of 4) 7281 NM_001145337 4193 Hs.484551 NM_002392 ENSG00000135679 MDM2 ACTFS|HDMX|hdm2 MDM2 proto-oncogene protein-coding chr13-206 chr13 36821135 36821379 + 10.9 0.000 intron (NM_000538, intron 1 of 2) intron (NM_000538, intron 1 of 2) 2055 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding chr2-2008 chr2 241774299 241774543 + 10.9 0.000 Intergenic Intergenic -2401 NM_022134 64090 Hs.632556 NM_022134 ENSG00000154252 GAL3ST2 GAL3ST-2|GP3ST galactose-3-O-sulfotransferase 2 protein-coding chr1-2510 chr1 153549341 153549585 + 10.9 0.000 promoter-TSS (NM_002960) promoter-TSS (NM_002960) -205 NM_002960 6274 Hs.557609 NM_002960 ENSG00000188015 S100A3 S100E S100 calcium binding protein A3 protein-coding chr16-1119 chr16 53664683 53664927 + 10.9 0.000 intron (NM_001127897, intron 10 of 24) intron (NM_001127897, intron 10 of 24) 39054 NM_015272 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding chrX-487 chrX 71366604 71366848 + 10.9 0.000 intron (NR_104387, intron 1 of 39) CpG 369 NR_104387 6872 Hs.158560 NM_004606 ENSG00000147133 TAF1 BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP TATA-box binding protein associated factor 1 protein-coding chr2-1438 chr2 10433491 10433735 + 10.9 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 13236 NR_028374 100302743 Hs.730525 NR_028374 ENSG00000206633 SNORA80B ACA67B small nucleolar RNA, H/ACA box 80B snoRNA chr3-944 chr3 43217314 43217558 + 10.9 0.000 Intergenic Intergenic -69076 NM_001100594 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding chr9-1036 chr9 136769961 136770205 + 10.9 0.000 Intergenic Intergenic -5565 NM_203347 389812 Hs.413902 NM_203347 ENSG00000177984 LCN15 PRO6093|UNQ2541 lipocalin 15 protein-coding chr9-1134 chr9 133126166 133126410 + 10.9 0.000 intron (NM_001042368, intron 1 of 17) intron (NM_001042368, intron 1 of 17) 3113 NM_001271775 5900 Hs.106185 NM_006266 ENSG00000160271 RALGDS RGDS|RGF|RalGEF ral guanine nucleotide dissociation stimulator protein-coding chrX-370 chrX 46545146 46545390 + 10.9 0.000 promoter-TSS (NR_015378) promoter-TSS (NR_015378) 153 NM_001039891 641339 Hs.636105 NM_001039891 ENSG00000251192 ZNF674 MRX92|ZNF673B zinc finger protein 674 protein-coding chr1-1330 chr1 46346023 46346267 + 10.9 0.000 intron (NR_045790, intron 2 of 4) AluSx|SINE|Alu 4967 NM_001256128 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr14-691 chr14 34904661 34904905 + 10.9 0.000 Intergenic L3|LINE|CR1 -29423 NM_182648 11177 Hs.509140 NM_013448 ENSG00000198604 BAZ1A ACF1|WALp1|WCRF180|hACF1 bromodomain adjacent to zinc finger domain 1A protein-coding chrX-542 chrX 130080206 130080450 + 10.9 0.000 intron (NM_001127197, intron 2 of 8) AluSz|SINE|Alu 30172 NM_001421 2000 Hs.271940 NM_001421 ENSG00000102034 ELF4 ELFR|MEF E74 like ETS transcription factor 4 protein-coding chr3-187 chr3 141876427 141876671 + 10.9 0.000 promoter-TSS (NM_001679) promoter-TSS (NM_001679) -94 NM_001679 483 Hs.477789 NM_001679 ENSG00000069849 ATP1B3 ATPB-3|CD298 ATPase Na+/K+ transporting subunit beta 3 protein-coding chr2-1988 chr2 238556141 238556385 + 10.9 0.000 promoter-TSS (NR_037809) promoter-TSS (NR_037809) -764 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA chr6-468 chr6 138107418 138107662 + 10.9 0.000 promoter-TSS (NM_022121) promoter-TSS (NM_022121) -121 NM_022121 64065 Hs.201446 NM_022121 ENSG00000112378 PERP KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1 p53 apoptosis effector related to PMP22 protein-coding chr22-613 chr22 19730205 19730449 + 10.9 0.000 Intergenic Intergenic 6784 NM_000407 2812 Hs.283743 NM_000407 ENSG00000203618 GP1BB BDPLT1|BS|CD42C|GPIBB|GPIbbeta glycoprotein Ib platelet subunit beta protein-coding chr17-849 chr17 31475689 31475933 + 10.9 0.000 intron (NM_032932, intron 3 of 14) Tigger17a|DNA|TcMar-Tigger -12297 NM_001346749 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr20-528 chr20 4245696 4245940 + 10.9 0.000 intron (NM_000678, intron 1 of 1) intron (NM_000678, intron 1 of 1) 3469 NM_000678 146 Hs.557 NM_000678 ENSG00000171873 ADRA1D ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2 adrenoceptor alpha 1D protein-coding chr5-1116 chr5 134138342 134138586 + 10.9 0.000 intron (NR_033449, intron 2 of 7) intron (NR_033449, intron 2 of 7) 14846 NM_001366502 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr17-1329 chr17 47005248 47005492 + 10.9 0.000 Intergenic MIRb|SINE|MIR -26117 NM_203400 388394 Hs.367999 NM_203400 ENSG00000179673 RPRML - reprimo like protein-coding chr1-2673 chr1 232667713 232667957 + 10.9 0.000 Intergenic Intergenic -50236 NR_146922 105373199 Hs.254475 NR_146922 ENSG00000225919 LINC01745 - long intergenic non-protein coding RNA 1745 ncRNA chr1-1866 chr1 168178709 168178953 + 10.9 0.000 promoter-TSS (NM_001031800) promoter-TSS (NM_001031800) -131 NM_152902 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding chr12-1147 chr12 60148137 60148381 + 10.9 0.000 Intergenic Intergenic 458889 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding chr6-666 chr6 26521645 26521889 + 10.9 0.000 promoter-TSS (NR_026790) promoter-TSS (NR_026790) 61 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 CTA-14H9.3|bK14H9.3 HLA complex group 11 ncRNA chr1-2319 chr1 30160256 30160500 + 10.9 0.000 Intergenic Intergenic -122766 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA chr5-1091 chr5 121088120 121088364 + 10.9 0.000 Intergenic MSTA-int|LTR|ERVL-MaLR -234308 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA chr18-305 chr18 12391667 12391911 + 10.9 0.000 Intergenic Intergenic -14513 NM_006796 10939 Hs.726355 NM_006796 ENSG00000141385 AFG3L2 SCA28|SPAX5 AFG3 like matrix AAA peptidase subunit 2 protein-coding chr19-1480 chr19 5222937 5223181 + 10.9 0.000 exon (NM_130854, exon 14 of 33) exon (NM_130854, exon 14 of 33) 117753 NM_002850 5802 Hs.744928 NM_002850 ENSG00000105426 PTPRS PTPSIGMA|R-PTP-S|R-PTP-sigma protein tyrosine phosphatase receptor type S protein-coding chr10-605 chr10 132931377 132931621 + 10.9 0.000 intron (NM_001200049, intron 8 of 57) intron (NM_001200049, intron 8 of 57) 11071 NM_001200049 54777 Hs.298038 NM_017609 ENSG00000171811 CFAP46 C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3 cilia and flagella associated protein 46 protein-coding chr17-865 chr17 46904035 46904279 + 10.9 0.000 Intergenic (GGAT)n|Simple_repeat|Simple_repeat -18960 NM_001353115 9570 Hs.463278 NM_004287 ENSG00000108433 GOSR2 Bos1|EPM6|GS27 golgi SNAP receptor complex member 2 protein-coding chr10-989 chr10 47312064 47312308 + 10.9 0.000 intron (NM_004962, intron 2 of 2) intron (NM_004962, intron 2 of 2) -10268 NM_016204 2658 Hs.279463 NM_016204 ENSG00000263761 GDF2 BMP-9|BMP9|HHT5 growth differentiation factor 2 protein-coding chr9-994 chr9 132987662 132987906 + 10.9 0.000 intron (NM_001135031, intron 3 of 5) intron (NM_001135031, intron 3 of 5) 9090 NM_001135031 8328 Hs.553160 NM_004188 ENSG00000165702 GFI1B BDPLT17|ZNF163B growth factor independent 1B transcriptional repressor protein-coding chr10-1291 chr10 118586764 118587008 + 10.9 0.000 Intergenic Intergenic 8762 NM_004248 2834 Hs.248119 NM_004248 ENSG00000119973 PRLHR GPR10|GR3|PrRPR prolactin releasing hormone receptor protein-coding chr2-829 chr2 26913709 26913953 + 10.9 0.000 intron (NM_020134, intron 2 of 12) intron (NM_020134, intron 2 of 12) -56806 NM_012326 22924 Hs.515860 NM_012326 ENSG00000084764 MAPRE3 EB3|EBF3|EBF3-S|RP3 microtubule associated protein RP/EB family member 3 protein-coding chr10-1255 chr10 101282089 101282333 + 10.9 0.000 Intergenic Intergenic -18661 NR_120621 101927419 Hs.638503 NR_120621 ENSG00000229649 LINC02681 - long intergenic non-protein coding RNA 2681 ncRNA chr1-1090 chr1 186307411 186307655 + 10.9 0.000 exon (NM_001127709, exon 5 of 11) exon (NM_001127709, exon 5 of 11) 11260 NM_005807 10216 Hs.647723 NM_005807 ENSG00000116690 PRG4 CACP|HAPO|JCAP|MSF|SZP proteoglycan 4 protein-coding chr12-977 chr12 68359020 68359264 + 10.9 0.000 Intergenic Intergenic -26728 NM_001354974 56890 Hs.655702 NM_017440 ENSG00000111554 MDM1 - Mdm1 nuclear protein protein-coding chr19-1232 chr19 35041472 35041716 + 10.9 0.000 intron (NM_002151, intron 1 of 13) intron (NM_002151, intron 1 of 13) 1088 NM_182983 3249 Hs.182385 NM_002151 ENSG00000105707 HPN TMPRSS1 hepsin protein-coding chr11-1023 chr11 93542557 93542801 + 10.9 0.000 intron (NM_020179, intron 1 of 2) CpG 712 NM_020179 56935 Hs.438064 NM_020179 ENSG00000166002 SMCO4 C11orf75|FN5 single-pass membrane protein with coiled-coil domains 4 protein-coding chr1-1168 chr1 62170620 62170864 + 10.9 0.000 Intergenic AluSx1|SINE|Alu -24107 NM_001164835 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr13-532 chr13 112687606 112687850 + 10.9 0.000 Intergenic Intergenic -2601 NM_015205 23250 Hs.29189 NM_015205 ENSG00000068650 ATP11A ATPIH|ATPIS ATPase phospholipid transporting 11A protein-coding chr14-512 chr14 35403973 35404217 + 10.9 0.000 intron (NM_020529, intron 1 of 5) CpG 659 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding chr5-1136 chr5 141320624 141320868 + 10.7 0.000 promoter-TSS (NM_005642) promoter-TSS (NM_005642) 38 NM_005642 6879 Hs.438838 NM_005642 ENSG00000178913 TAF7 TAF2F|TAFII55 TATA-box binding protein associated factor 7 protein-coding chr3-1219 chr3 12222921 12223165 + 10.7 0.000 Intergenic Intergenic -64131 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr2-1733 chr2 74465357 74465601 + 10.7 0.000 promoter-TSS (NM_006302) promoter-TSS (NM_006302) -97 NM_001146158 7841 Hs.516119 NM_006302 ENSG00000115275 MOGS CDG2B|CWH41|DER7|GCS1 mannosyl-oligosaccharide glucosidase protein-coding chr17-911 chr17 1229395 1229639 + 10.7 0.000 exon (NM_001322841, exon 1 of 23) exon (NM_001322841, exon 1 of 23) 205 NM_001322842 29 Hs.159306 NM_001092 ENSG00000159842 ABR MDB ABR activator of RhoGEF and GTPase protein-coding chr2-820 chr2 241010502 241010746 + 10.7 0.000 intron (NM_001080437, intron 1 of 31) intron (NM_001080437, intron 1 of 31) 12006 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr2-1821 chr2 129766116 129766360 + 10.7 0.000 Intergenic Intergenic 111253 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA chr11-1031 chr11 119094447 119094691 + 10.7 0.000 3' UTR (NM_002105, exon 1 of 1) 3' UTR (NM_002105, exon 1 of 1) 898 NM_002105 3014 Hs.477879 NM_002105 ENSG00000188486 H2AFX H2A.X|H2A/X|H2AX H2A histone family member X protein-coding chr5-1130 chr5 139684821 139685065 + 10.7 0.000 Intergenic Intergenic 9500 NM_001317209 51523 Hs.189119 NM_016463 ENSG00000171604 CXXC5 CF5|HSPC195|RINF|WID CXXC finger protein 5 protein-coding chrX-324 chrX 113168921 113169165 + 10.7 0.000 intron (NR_110399, intron 3 of 3) intron (NR_110399, intron 3 of 3) 126316 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr8-837 chr8 29350532 29350776 + 10.7 0.000 promoter-TSS (NM_001394) promoter-TSS (NM_001394) 30 NM_001394 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding chr1-1307 chr1 28862825 28863069 + 10.7 0.000 exon (NM_000911, exon 3 of 3) exon (NM_000911, exon 3 of 3) -24144 NM_203342 2035 Hs.175437 NM_004437 ENSG00000159023 EPB41 4.1R|EL1|HE erythrocyte membrane protein band 4.1 protein-coding chr12-585 chr12 71439588 71439832 + 10.7 0.000 promoter-TSS (NM_003667) promoter-TSS (NM_003667) -88 NM_001277227 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding chr5-1183 chr5 176041320 176041564 + 10.7 0.000 Intergenic Intergenic 20613 NR_103794 100996385 Hs.382347 NR_103794 ENSG00000248469 LOC100996385 - uncharacterized LOC100996385 ncRNA chr5-208 chr5 91279604 91279848 + 10.7 0.000 Intergenic AluY|SINE|Alu 34676 NR_103548 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA chr19-1641 chr19 47039190 47039434 + 10.7 0.000 intron (NM_001321086, intron 3 of 7) intron (NM_001321086, intron 3 of 7) 3995 NM_001321086 4861 Hs.79564 NM_002517 ENSG00000130751 NPAS1 MOP5|PASD5|bHLHe11 neuronal PAS domain protein 1 protein-coding chr3-1510 chr3 196948284 196948528 + 10.7 0.000 exon (NM_025163, exon 3 of 3) exon (NM_025163, exon 3 of 3) 5732 NM_001355243 152217 Hs.118820 NM_001355243 ENSG00000270170 NCBP2AS2 HIAR|NCBP2-AS2 NCBP2 antisense 2 (head to head) protein-coding chr20-238 chr20 57350883 57351127 + 10.7 0.000 promoter-TSS (NM_001015885) promoter-TSS (NM_001015885) -250 NM_003610 8480 Hs.371698 NM_003610 ENSG00000101146 RAE1 Gle2|MIG14|MRNP41|Mnrp41|dJ481F12.3|dJ800J21.1 ribonucleic acid export 1 protein-coding chrX-507 chrX 103255132 103255376 + 10.7 0.000 promoter-TSS (NM_153333) promoter-TSS (NM_153333) -61 NM_001006684 90843 Hs.389734 NM_153333 ENSG00000180964 TCEAL8 WEX3 transcription elongation factor A like 8 protein-coding chrX-92 chrX 16911136 16911380 + 10.7 0.000 Intergenic L1ME3|LINE|L1 -35400 NM_004726 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr9-1216 chr9 71767849 71768093 + 10.7 0.000 intron (NM_013390, intron 1 of 23) intron (NM_013390, intron 1 of 23) 542 NM_001135820 23670 Hs.494146 NM_013390 ENSG00000135048 CEMIP2 TMEM2 cell migration inducing hyaluronidase 2 protein-coding chr16-224 chr16 57729332 57729576 + 10.7 0.000 intron (NM_032269, intron 16 of 17) (GGAT)n|Simple_repeat|Simple_repeat -6316 NM_005886 10300 Hs.275675 NM_005886 ENSG00000140854 KATNB1 KAT|LIS6 katanin regulatory subunit B1 protein-coding chr7-1388 chr7 117338066 117338310 + 10.7 0.000 Intergenic MLT1J|LTR|ERVL-MaLR -15130 NM_003391 7472 Hs.567356 NM_003391 ENSG00000105989 WNT2 INT1L1|IRP Wnt family member 2 protein-coding chr12-758 chr12 80300008 80300252 + 10.7 0.000 intron (NM_173591, intron 26 of 57) intron (NM_173591, intron 26 of 57) 90677 NM_173591 283310 Hs.723594 NM_173591 ENSG00000165899 OTOGL C12orf64|DFNB84B otogelin like protein-coding chr5-292 chr5 138304329 138304573 + 10.7 0.000 intron (NM_001790, intron 7 of 13) L2a|LINE|L2 27353 NM_001790 995 Hs.656 NM_001790 ENSG00000158402 CDC25C CDC25|PPP1R60 cell division cycle 25C protein-coding chr16-1159 chr16 68032919 68033163 + 10.7 0.000 intron (NM_017803, intron 2 of 16) L2a|LINE|L2 -9174 NM_018380 55794 Hs.458313 NM_018380 ENSG00000182810 DDX28 MDDX28 DEAD-box helicase 28 protein-coding chr16-914 chr16 1260605 1260849 + 10.7 0.000 Intergenic CpG 4658 NM_012217 23430 Hs.677789 NM_012217 ENSG00000095917 TPSD1 MCP7-LIKE|MCP7L1|MMCP-7L tryptase delta 1 protein-coding chr11-1064 chr11 9873064 9873308 + 10.7 0.000 intron (NM_030962, intron 17 of 39) AluSc8|SINE|Alu 34044 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA chr2-1515 chr2 134757105 134757349 + 10.7 0.000 Intergenic AluSz6|SINE|Alu -38227 NM_030923 81615 Hs.369471 NM_030923 ENSG00000152128 TMEM163 DC29|SV31 transmembrane protein 163 protein-coding chrX-82 chrX 122467612 122467856 + 10.7 0.000 Intergenic AluSx3|SINE|Alu -716509 NM_000828 2892 Hs.377070 NM_000828 ENSG00000125675 GRIA3 GLUR-C|GLUR-K3|GLUR3|GLURC|GluA3|MRX94 glutamate ionotropic receptor AMPA type subunit 3 protein-coding chr9-805 chr9 124507313 124507557 + 10.7 0.000 promoter-TSS (NM_004959) promoter-TSS (NM_004959) -36 NM_004959 2516 Hs.495108 NM_004959 ENSG00000136931 NR5A1 AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 nuclear receptor subfamily 5 group A member 1 protein-coding chr10-802 chr10 21766880 21767124 + 10.7 0.000 intron (NM_022365, intron 9 of 11) intron (NM_022365, intron 9 of 11) 232830 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr17-638 chr17 55493704 55493948 + 10.7 0.000 Intergenic AluJb|SINE|Alu -71991 NM_012329 23531 Hs.463483 NM_012329 ENSG00000108960 MMD MMA|MMD1|PAQR11 monocyte to macrophage differentiation associated protein-coding chr16-1017 chr16 781565 781809 + 10.7 0.000 Intergenic Intergenic 6694 NM_001324414 113000 Hs.101742 NM_058192 ENSG00000007376 RPUSD1 C16orf40|RLUCL RNA pseudouridine synthase domain containing 1 protein-coding chr13-437 chr13 30905815 30906059 + 10.7 0.000 promoter-TSS (NM_032849) promoter-TSS (NM_032849) -334 NM_032849 84935 Hs.147880 NM_032849 ENSG00000102802 MEDAG AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3 mesenteric estrogen dependent adipogenesis protein-coding chr18-114 chr18 47959023 47959267 + 10.7 0.000 Intergenic AluY|SINE|Alu -27999 NM_001135937 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chr20-657 chr20 62708791 62709035 + 10.7 0.000 promoter-TSS (NM_002531) promoter-TSS (NM_002531) 77 NM_002531 4923 Hs.590869 NM_002531 ENSG00000101188 NTSR1 NTR neurotensin receptor 1 protein-coding chr7-437 chr7 147072734 147072978 + 10.7 0.000 intron (NM_014141, intron 3 of 22) AluY|SINE|Alu 24753 NR_110829 101928700 Hs.571218 NR_110829 ENSG00000236795 LOC101928700 - uncharacterized LOC101928700 ncRNA chr5-250 chr5 176409297 176409541 + 10.7 0.000 intron (NR_045724, intron 2 of 5) AluSq2|SINE|Alu 1404 NM_001364126 1212 Hs.484241 NM_001834 ENSG00000175416 CLTB LCB clathrin light chain B protein-coding chr2-823 chr2 2865951 2866195 + 10.7 0.000 Intergenic Intergenic 259953 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr2-1588 chr2 240904985 240905229 + 10.7 0.000 Intergenic Intergenic -1229 NM_001351305 728763 Hs.647892 NM_001351305 ENSG00000226321 CROCC2 - ciliary rootlet coiled-coil, rootletin family member 2 protein-coding chr6-389 chr6 35921080 35921324 + 10.7 0.000 promoter-TSS (NR_034069) promoter-TSS (NR_034069) -22 NR_034069 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding chr10-1186 chr10 71999432 71999676 + 10.7 0.000 intron (NM_004273, intron 1 of 2) (ACCCC)n|Simple_repeat|Simple_repeat 35159 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding chr1-1339 chr1 54669791 54670035 + 10.7 0.000 intron (NM_001291332, intron 3 of 21) AluSz|SINE|Alu 28127 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding chr13-494 chr13 76372444 76372688 + 10.7 0.000 Intergenic Intergenic -437434 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA chr12-1002 chr12 119399820 119400064 + 10.7 0.000 intron (NM_178499, intron 1 of 13) intron (NM_178499, intron 1 of 13) 65213 NM_178499 160777 Hs.98188 NM_178499 ENSG00000183273 CCDC60 - coiled-coil domain containing 60 protein-coding chr4-991 chr4 66916201 66916445 + 10.7 0.000 Intergenic MLT2B4|LTR|ERVL 505677 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA chr15-410 chr15 25775324 25775568 + 10.7 0.000 intron (NM_024490, intron 2 of 20) intron (NM_024490, intron 2 of 20) 73379 NR_039865 100616474 NR_039865 ENSG00000266517 MIR4715 - microRNA 4715 ncRNA chr20-606 chr20 44651538 44651782 + 10.7 0.000 promoter-TSS (NM_000022) promoter-TSS (NM_000022) 39 NM_000022 100 Hs.654536 NM_000022 ENSG00000196839 ADA - adenosine deaminase protein-coding chr17-1008 chr17 58338112 58338356 + 10.7 0.000 intron (NR_038418, intron 2 of 3) intron (NR_038418, intron 2 of 3) 1032 NR_038417 100506779 Hs.718477 NR_038410 ENSG00000265148 TSPOAP1-AS1 BZRAP1-AS1 TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 ncRNA chr17-700 chr17 59362290 59362534 + 10.7 0.000 intron (NM_001005404, intron 2 of 4) intron (NM_001005404, intron 2 of 4) -3671 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA chr1-1450 chr1 226062413 226062657 + 10.7 0.000 promoter-TSS (NR_002315) promoter-TSS (NR_002315) -181 NM_002107 3020 Hs.533624 NM_002107 ENSG00000163041 H3F3A H3.3A|H3F3 H3 histone family member 3A protein-coding chr20-392 chr20 290340 290584 + 10.7 0.000 intron (NM_153269, intron 1 of 10) CpG 288 NM_153269 140680 Hs.348112 NM_080571 ENSG00000196476 C20orf96 dJ1103G7.2 chromosome 20 open reading frame 96 protein-coding chr19-1648 chr19 48668725 48668969 + 10.7 0.000 intron (NR_004401, intron 3 of 4) intron (NR_004401, intron 3 of 4) 4234 NM_145807 126147 Hs.326217 NM_145807 ENSG00000142233 NTN5 - netrin 5 protein-coding chr12-1201 chr12 105326713 105326957 + 10.7 0.000 intron (NR_131986, intron 1 of 2) intron (NR_131986, intron 1 of 2) 182 NR_131986 105369954 Hs.368938 NR_131986 ENSG00000257642 KCCAT198 - renal clear cell carcinoma-associated transcript 198 ncRNA chr6-894 chr6 4276038 4276282 + 10.7 0.000 Intergenic AluY|SINE|Alu -86131 NR_125874 102724096 Hs.571140 NR_125874 LOC102724096 - uncharacterized LOC102724096 ncRNA chr10-294 chr10 74138820 74139064 + 10.7 0.000 intron (NM_207012, intron 1 of 9) AluJo|SINE|Alu 11886 NM_012095 26985 Hs.500104 NM_012095 ENSG00000185009 AP3M1 - adaptor related protein complex 3 subunit mu 1 protein-coding chr18-343 chr18 56576056 56576300 + 10.7 0.000 Intergenic Intergenic 62414 NM_004786 9352 Hs.114412 NM_004786 ENSG00000091164 TXNL1 HEL-S-114|TRP32|TXL-1|TXNL|Txl thioredoxin like 1 protein-coding chr7-1435 chr7 140405598 140405842 + 10.7 0.000 intron (NM_001008749, intron 1 of 3) intron (NM_001008749, intron 1 of 3) 1662 NM_001008749 401409 Hs.583545 NM_001008749 ENSG00000146955 RAB19 RAB19B RAB19, member RAS oncogene family protein-coding chr16-798 chr16 11674367 11674611 + 10.7 0.000 intron (NM_003498, intron 1 of 1) intron (NM_003498, intron 1 of 1) 6034 NM_003498 8303 Hs.618526 NM_003498 ENSG00000184602 SNN - stannin protein-coding chr17-727 chr17 83051625 83051869 + 10.7 0.000 promoter-TSS (NM_001320742) promoter-TSS (NM_001320742) 23 NR_135465 146712 Hs.607824 NM_001009905 ENSG00000175711 B3GNTL1 3-Gn-T8|B3GNT8|BGnT-8|beta-1|beta3Gn-T8|beta3GnTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 protein-coding chr1-2069 chr1 153941921 153942165 + 10.7 0.000 exon (NM_001367466, exon 6 of 28) exon (NM_001367466, exon 6 of 28) 3213 NM_001367466 9909 Hs.744878 NM_014856 ENSG00000198837 DENND4B KIAA0476 DENN domain containing 4B protein-coding chr3-1367 chr3 108486945 108487189 + 10.7 0.000 intron (NM_014981, intron 10 of 41) intron (NM_014981, intron 10 of 41) 42255 NM_014981 22989 Hs.731060 NM_014981 ENSG00000144821 MYH15 - myosin heavy chain 15 protein-coding chr11-1281 chr11 46216053 46216297 + 10.7 0.000 Intergenic MIR3|SINE|MIR 44220 NR_120565 101928894 Hs.552679 NR_120565 ENSG00000255314 LOC101928894 - uncharacterized LOC101928894 ncRNA chr13-480 chr13 60316415 60316659 + 10.7 0.000 Intergenic AluSx|SINE|Alu -48433 NR_047022 100874169 Hs.171027 NR_047022 LINC00434 - long intergenic non-protein coding RNA 434 ncRNA chr11-664 chr11 65150454 65150698 + 10.7 0.000 Intergenic MIR|SINE|MIR -16057 NM_172230 84447 Hs.75859 NM_032431 ENSG00000162298 SYVN1 DER3|HRD1 synoviolin 1 protein-coding chr19-886 chr19 45876889 45877133 + 10.6 0.000 Intergenic (CAGGCCT)n|Simple_repeat|Simple_repeat 9130 NM_015649 26145 Hs.515477 NM_015649 ENSG00000170604 IRF2BP1 - interferon regulatory factor 2 binding protein 1 protein-coding chr12-971 chr12 57174655 57174899 + 10.6 0.000 intron (NM_002332, intron 22 of 88) intron (NM_002332, intron 22 of 88) -19727 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr13-374 chr13 113764415 113764659 + 10.6 0.000 intron (NM_182614, intron 1 of 8) intron (NM_182614, intron 1 of 8) 5294 NM_001348663 348013 Hs.280805 NM_182614 ENSG00000184497 TMEM255B FAM70B transmembrane protein 255B protein-coding chr8-847 chr8 33512529 33512773 + 10.6 0.000 promoter-TSS (NR_003041) promoter-TSS (NR_003041) 484 NM_001102401 80185 Hs.77135 NM_025115 ENSG00000129696 TTI2 C8orf41|MRT39 TELO2 interacting protein 2 protein-coding chr14-833 chr14 105528843 105529087 + 10.6 0.000 exon (NM_025268, exon 2 of 2) exon (NM_025268, exon 2 of 2) 1860 NM_001331238 80757 Hs.157527 NM_025268 ENSG00000184986 TMEM121 TMEM121A|hole transmembrane protein 121 protein-coding chr14-535 chr14 55173172 55173416 + 10.6 0.000 intron (NM_001146015, intron 10 of 19) AluJo|SINE|Alu 18291 NM_001146015 9787 Hs.77695 NM_014750 ENSG00000126787 DLGAP5 DLG7|HURP DLG associated protein 5 protein-coding chr4-836 chr4 125096288 125096532 + 10.6 0.000 Intergenic Intergenic -220002 NM_024582 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding chr9-1079 chr9 83934417 83934661 + 10.6 0.000 Intergenic MER92C|LTR|ERV1 -12995 NM_001271927 55582 Hs.697514 NM_017576 ENSG00000165115 KIF27 - kinesin family member 27 protein-coding chr1-2211 chr1 8026908 8027152 + 10.6 0.000 promoter-TSS (NM_018948) promoter-TSS (NM_018948) -721 NM_018948 54206 Hs.605445 NM_018948 ENSG00000116285 ERRFI1 GENE-33|MIG-6|MIG6|RALT ERBB receptor feedback inhibitor 1 protein-coding chr18-250 chr18 58768470 58768714 + 10.6 0.000 Intergenic CpG -45288 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA chr3-1261 chr3 45761115 45761359 + 10.6 0.000 intron (NM_022405, intron 8 of 9) intron (NM_022405, intron 8 of 9) 35299 NM_022405 54716 Hs.413095 NM_020208 ENSG00000163817 SLC6A20 SIT1|XT3|Xtrp3 solute carrier family 6 member 20 protein-coding chr17-864 chr17 45149164 45149408 + 10.6 0.000 exon (NM_006460, exon 1 of 1) exon (NM_006460, exon 1 of 1) 1969 NM_006460 10614 Hs.586945 NM_006460 ENSG00000186834 HEXIM1 CLP1|EDG1|HIS1|MAQ1 HEXIM P-TEFb complex subunit 1 protein-coding chr22-342 chr22 46290438 46290682 + 10.6 0.000 intron (NM_017931, intron 13 of 13) intron (NM_017931, intron 13 of 13) 6100 NR_024009 150384 Hs.348663 NR_024009 ENSG00000277232 GTSE1-DT CN5H6.4|GTSE1-AS1|LL22NC03-5H6.6 GTSE1 divergent transcript ncRNA chr6-793 chr6 36546356 36546600 + 10.6 0.000 intron (NM_007271, intron 1 of 13) intron (NM_007271, intron 1 of 13) 1001 NM_007271 11329 Hs.409578 NM_007271 ENSG00000112079 STK38 NDR|NDR1 serine/threonine kinase 38 protein-coding chr3-1293 chr3 50253009 50253253 + 10.6 0.000 exon (NM_001166425, exon 4 of 9) exon (NM_001166425, exon 4 of 9) 6221 NM_001166425 2771 Hs.77269 NM_002070 ENSG00000114353 GNAI2 GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1 G protein subunit alpha i2 protein-coding chr20-572 chr20 32384134 32384378 + 10.6 0.000 intron (NM_015338, intron 3 of 11) AluSz|SINE|Alu 25191 NM_001363734 171023 Hs.374043 NM_015338 ENSG00000171456 ASXL1 BOPS|MDS ASXL transcriptional regulator 1 protein-coding chr5-677 chr5 124545334 124545578 + 10.6 0.000 Intergenic AluJo|SINE|Alu -106936 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr7-469 chr7 74289307 74289551 + 10.6 0.000 promoter-TSS (NM_003388) promoter-TSS (NM_003388) 22 NM_032421 7461 Hs.647018 NM_003388 ENSG00000106665 CLIP2 CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4 CAP-Gly domain containing linker protein 2 protein-coding chrX-197 chrX 42966259 42966503 + 10.6 0.000 Intergenic LTR49-int|LTR|ERV1 -188218 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding chr19-1511 chr19 10975772 10976016 + 10.6 0.000 intron (NM_003072, intron 1 of 34) intron (NM_003072, intron 1 of 34) -8258 NM_001128845 6597 Hs.327527 NM_003072 ENSG00000127616 SMARCA4 BAF190|BAF190A|BRG1|CSS4|MRD16|RTPS2|SNF2|SNF2L4|SNF2LB|SWI2|hSNF2b SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 protein-coding chr16-873 chr16 85172749 85172993 + 10.6 0.000 Intergenic Intergenic -34925 NR_162142 113219463 NR_162142 MIR12128 - microRNA 12128 ncRNA chr13-314 chr13 28322932 28323176 + 10.6 0.000 intron (NM_002019, intron 20 of 29) intron (NM_002019, intron 20 of 29) 172074 NM_001159920 2321 Hs.594454 NM_002019 ENSG00000102755 FLT1 FLT|FLT-1|VEGFR-1|VEGFR1 fms related tyrosine kinase 1 protein-coding chr11-1267 chr11 19244101 19244345 + 10.6 0.000 Intergenic Intergenic -2568 NM_001256372 79733 Hs.523526 NM_024680 ENSG00000129173 E2F8 E2F-8 E2F transcription factor 8 protein-coding chr3-1286 chr3 49574452 49574696 + 10.6 0.000 intron (NM_003458, intron 1 of 11) AluSq2|SINE|Alu 20097 NM_003458 8927 Hs.194684 NM_003458 ENSG00000164061 BSN ZNF231 bassoon presynaptic cytomatrix protein protein-coding chr12-306 chr12 109342399 109342643 + 10.6 0.000 Intergenic Zaphod3|DNA|hAT-Tip100 16967 NR_120462 101928138 Hs.143843 NR_120462 ENSG00000256560 LINC01486 - long intergenic non-protein coding RNA 1486 ncRNA chr19-1652 chr19 49570830 49571074 + 10.6 0.000 intron (NM_001270960, intron 1 of 8) intron (NM_001270960, intron 1 of 8) 9604 NM_001270960 51070 Hs.7236 NM_015953 ENSG00000142546 NOSIP CGI-25 nitric oxide synthase interacting protein protein-coding chr15-549 chr15 43200668 43200912 + 10.6 0.000 intron (NM_001114134, intron 12 of 12) L1ME5|LINE|L1 15387 NR_045998 23582 Hs.36794 NM_012142 ENSG00000166946 CCNDBP1 DIP1|GCIP|HHM cyclin D1 binding protein 1 protein-coding chr8-875 chr8 54579700 54579944 + 10.6 0.000 Intergenic Intergenic -36274 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding chr19-1531 chr19 14363459 14363703 + 10.6 0.000 intron (NR_134908, intron 1 of 3) intron (NR_134908, intron 1 of 3) 409 NR_134908 105372288 Hs.628463 NR_134908 ENSG00000266913 LINC01841 - long intergenic non-protein coding RNA 1841 ncRNA chr22-558 chr22 19561938 19562182 + 10.6 0.000 Intergenic FLAM_C|SINE|Alu 4779 NR_024381 150185 Hs.719752 NR_024381 LINC00895 - long intergenic non-protein coding RNA 895 ncRNA chr1-2293 chr1 22841855 22842099 + 10.6 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 21249 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr13-381 chr13 40666859 40667103 + 10.6 0.000 promoter-TSS (NM_002015) promoter-TSS (NM_002015) -340 NM_002015 2308 Hs.370666 NM_002015 ENSG00000150907 FOXO1 FKH1|FKHR|FOXO1A forkhead box O1 protein-coding chr13-368 chr13 113061087 113061331 + 10.6 0.000 intron (NM_001366646, intron 3 of 27) intron (NM_001366646, intron 3 of 27) 16563 NM_001366645 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr14-511 chr14 34714454 34714698 + 10.6 0.000 promoter-TSS (NM_138638) promoter-TSS (NM_138638) 17 NM_138638 1073 Hs.180141 NM_021914 ENSG00000165410 CFL2 NEM7 cofilin 2 protein-coding chr20-316 chr20 17212649 17212893 + 10.6 0.000 Intergenic AluSg|SINE|Alu -13336 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding chr10-931 chr10 122141182 122141426 + 10.6 0.000 intron (NM_001291876, intron 6 of 19) intron (NM_001291876, intron 6 of 19) -22326 NM_001291878 10579 Hs.501252 NM_006997 ENSG00000138162 TACC2 AZU-1|ECTACC transforming acidic coiled-coil containing protein 2 protein-coding chr8-434 chr8 700214 700458 + 10.6 0.000 intron (NR_156467, intron 2 of 5) CpG 30888 NR_156467 157697 Hs.655310 NM_207332 ENSG00000104714 ERICH1 HSPC319 glutamate rich 1 protein-coding chr9-954 chr9 122516087 122516331 + 10.6 0.000 Intergenic MIRb|SINE|MIR -2932 NM_001004452 26219 Hs.632679 NM_001004452 ENSG00000239590 OR1J4 HSHTPCRX01|HTPCRX01|OR9-21 olfactory receptor family 1 subfamily J member 4 protein-coding chr12-1077 chr12 31868047 31868291 + 10.6 0.000 Intergenic Intergenic 19034 NR_135029 105369723 Hs.736954 NR_135029 ENSG00000255760 LINC02422 - long intergenic non-protein coding RNA 2422 ncRNA chr1-2413 chr1 75263880 75264124 + 10.6 0.000 intron (NM_001320283, intron 4 of 21) L1PA7|LINE|L1 129614 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding chr19-772 chr19 543708 543952 + 10.6 0.000 promoter-TSS (NM_005317) promoter-TSS (NM_005317) -223 NM_005317 3004 Hs.465511 NM_005317 ENSG00000197540 GZMM LMET1|MET1 granzyme M protein-coding chr1-1707 chr1 30651591 30651835 + 10.6 0.000 Intergenic Intergenic -67059 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA chr1-2209 chr1 7951911 7952155 + 10.6 0.000 Intergenic Intergenic -8868 NM_001561 3604 Hs.86447 NM_001561 ENSG00000049249 TNFRSF9 4-1BB|CD137|CDw137|ILA TNF receptor superfamily member 9 protein-coding chr9-1003 chr9 134175570 134175814 + 10.6 0.000 Intergenic Intergenic -11128 NR_023344 100151684 Hs.545589 NR_023344 ENSG00000221676 RNU6ATAC RNU6ATAC1|U6ATAC RNA, U6atac small nuclear (U12-dependent splicing) snRNA chr4-983 chr4 56598448 56598692 + 10.6 0.000 intron (NM_001256475, intron 7 of 8) L2a|LINE|L2 57952 NM_001145459 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr18-208 chr18 66467835 66468079 + 10.6 0.000 Intergenic MSTA|LTR|ERVL-MaLR 136133 NR_073130 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr22-379 chr22 25931651 25931895 + 10.6 0.000 intron (NM_001318245, intron 34 of 43) AluJb|SINE|Alu 189585 NM_032608 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding chr14-517 chr14 38835077 38835321 + 10.6 0.000 intron (NR_039982, intron 4 of 4) intron (NR_039982, intron 4 of 4) -47397 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA chr2-718 chr2 3294423 3294667 + 10.6 0.000 intron (NM_001330530, intron 3 of 9) intron (NM_001330530, intron 3 of 9) 83273 NM_003310 7260 Hs.502770 NM_003310 ENSG00000032389 EIPR1 EIPR-1|TSSC1 EARP complex and GARP complex interacting protein 1 protein-coding chr4-1062 chr4 128811257 128811501 + 10.6 0.000 promoter-TSS (NM_001287441) promoter-TSS (NM_001287441) 91 NM_001287441 79960 Hs.12420 NM_024900 ENSG00000077684 JADE1 PHF17 jade family PHD finger 1 protein-coding chr3-1295 chr3 50421983 50422227 + 10.6 0.000 intron (NM_001291101, intron 3 of 37) intron (NM_001291101, intron 3 of 37) 56742 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding chr10-1160 chr10 60668938 60669182 + 10.6 0.000 intron (NM_001204403, intron 1 of 43) intron (NM_001204403, intron 1 of 43) 64468 NM_001204403 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding chr17-1154 chr17 51225643 51225887 + 10.6 0.000 intron (NM_017643, intron 2 of 16) AluJo|SINE|Alu 34284 NM_017643 54799 Hs.656803 NM_017643 ENSG00000011258 MBTD1 SA49P01 mbt domain containing 1 protein-coding chr17-1479 chr17 82809100 82809344 + 10.6 0.000 intron (NM_005993, intron 11 of 38) intron (NM_005993, intron 11 of 38) 30800 NM_024702 79755 Hs.464391 NM_024702 ENSG00000141579 ZNF750 ZFP750 zinc finger protein 750 protein-coding chr6-1107 chr6 154733080 154733324 + 10.6 0.000 promoter-TSS (NM_001286189) promoter-TSS (NM_001286189) -176 NM_001286188 22828 Hs.591329 NM_014892 ENSG00000213079 SCAF8 RBM16 SR-related CTD associated factor 8 protein-coding chr5-897 chr5 79514496 79514740 + 10.6 0.000 promoter-TSS (NM_001277077) promoter-TSS (NM_001277077) -484 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding chr8-848 chr8 37091974 37092218 + 10.6 0.000 Intergenic AluYb9|SINE|Alu 307722 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding chr3-1234 chr3 23805862 23806106 + 10.6 0.000 promoter-TSS (NM_182666) promoter-TSS (NM_182666) 29 NM_003341 7324 Hs.164853 NM_003341 ENSG00000170142 UBE2E1 UBCH6 ubiquitin conjugating enzyme E2 E1 protein-coding chr12-527 chr12 56488126 56488370 + 10.6 0.000 promoter-TSS (NM_001280796) promoter-TSS (NM_001280796) -87 NM_001280796 27165 Hs.212606 NM_013267 ENSG00000135423 GLS2 GA|GLS|LGA|hLGA glutaminase 2 protein-coding chr18-273 chr18 34325383 34325627 + 10.6 0.000 Intergenic A-rich|Low_complexity|Low_complexity -101954 NM_001353233 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding chr12-1131 chr12 56007253 56007497 + 10.6 0.000 promoter-TSS (NM_001351089) promoter-TSS (NM_001351089) -129 NM_001351089 64375 Hs.553221 NM_022465 ENSG00000123411 IKZF4 EOS|ZNFN1A4 IKAROS family zinc finger 4 protein-coding chr9-654 chr9 68510055 68510299 + 10.6 0.000 intron (NM_021965, intron 10 of 10) AluYm1|SINE|Alu 30690 NM_153237 169693 Hs.663056 NM_153237 ENSG00000181778 TMEM252 C9orf71 transmembrane protein 252 protein-coding chr17-677 chr17 5439181 5439425 + 10.6 0.000 promoter-TSS (NM_001212) promoter-TSS (NM_001212) -148 NM_001212 708 Hs.555866 NM_001212 ENSG00000108561 C1QBP COXPD33|GC1QBP|HABP1|SF2AP32|SF2p32|gC1Q-R|gC1qR|p32 complement C1q binding protein protein-coding chr3-524 chr3 49148084 49148328 + 10.6 0.000 Intergenic AluSq2|SINE|Alu 6195 NR_004405 22973 Hs.607092 NR_004405 LAMB2P1 LAMB2L laminin subunit beta 2 pseudogene 1 pseudo chr12-1063 chr12 21942018 21942262 + 10.6 0.000 Intergenic CpG -5446 NM_005691 10060 Hs.732701 NM_005691 ENSG00000069431 ABCC9 ABC37|ATFB12|CANTU|CMD1O|SUR2 ATP binding cassette subfamily C member 9 protein-coding chr11-1496 chr11 61090232 61090476 + 10.6 0.000 Intergenic L2b|LINE|L2 -3609 NM_001346456 921 Hs.58685 NM_014207 ENSG00000110448 CD5 LEU1|T1 CD5 molecule protein-coding chr16-1028 chr16 1308925 1309169 + 10.6 0.000 promoter-TSS (NM_003345) promoter-TSS (NM_003345) -105 NM_194261 7329 Hs.302903 NM_003345 ENSG00000103275 UBE2I C358B7.1|P18|UBC9 ubiquitin conjugating enzyme E2 I protein-coding chr4-370 chr4 39320387 39320631 + 10.6 0.000 exon (NM_001363496, exon 8 of 24) exon (NM_001363496, exon 8 of 24) 45853 NM_001204747 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding chr14-467 chr14 36661735 36661979 + 10.6 0.000 5' UTR (NM_006194, exon 2 of 5) 5' UTR (NM_006194, exon 2 of 5) 4289 NM_006194 5083 Hs.132576 NM_006194 ENSG00000198807 PAX9 STHAG3 paired box 9 protein-coding chr7-1323 chr7 76054609 76054853 + 10.6 0.000 intron (NM_001282404, intron 1 of 7) intron (NM_001282404, intron 1 of 7) 6625 NR_104165 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr5-1199 chr5 180353533 180353777 + 10.6 0.000 promoter-TSS (NM_005110) promoter-TSS (NM_005110) -319 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chr19-1504 chr19 10502902 10503146 + 10.4 0.000 promoter-TSS (NM_012289) promoter-TSS (NM_012289) -253 NM_012289 9817 Hs.465870 NM_012289 ENSG00000079999 KEAP1 INrf2|KLHL19 kelch like ECH associated protein 1 protein-coding chr15-241 chr15 78131274 78131518 + 10.4 0.000 promoter-TSS (NM_001271888) promoter-TSS (NM_001271888) 49 NM_001271888 10518 Hs.129867 NM_006383 ENSG00000136425 CIB2 DFNB48|KIP2|USH1J calcium and integrin binding family member 2 protein-coding chr5-911 chr5 112921565 112921809 + 10.4 0.000 intron (NM_005669, intron 1 of 4) CpG 540 NM_005669 7905 Hs.429608 NM_005669 ENSG00000129625 REEP5 C5orf18|D5S346|DP1|TB2|YOP1|Yip2e receptor accessory protein 5 protein-coding chr11-1309 chr11 64258076 64258320 + 10.4 0.000 intron (NM_001316314, intron 10 of 31) L2|LINE|L2 6668 NM_001184883 5331 Hs.523761 NM_000932 ENSG00000149782 PLCB3 - phospholipase C beta 3 protein-coding chr20-413 chr20 23937388 23937632 + 10.4 0.000 Intergenic Intergenic 49365 NM_178312 92086 Hs.355394 NM_080920 ENSG00000149435 GGTLC1 GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2 gamma-glutamyltransferase light chain 1 protein-coding chr3-1396 chr3 126753353 126753597 + 10.4 0.000 intron (NM_032343, intron 4 of 7) intron (NM_032343, intron 4 of 7) 49235 NM_001320610 84303 Hs.518119 NM_032343 ENSG00000159685 CHCHD6 CHCM1|MICOS25|Mic25|PPP1R23 coiled-coil-helix-coiled-coil-helix domain containing 6 protein-coding chr2-1211 chr2 27717095 27717339 + 10.4 0.000 intron (NR_160725, intron 2 of 2) intron (NR_160725, intron 2 of 2) 1094 NR_160725 105374378 NR_160725 LOC105374378 - uncharacterized LOC105374378 ncRNA chr19-1090 chr19 34111164 34111408 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -61218 NM_015578 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding chr4-288 chr4 40629589 40629833 + 10.4 0.000 5' UTR (NM_001098634, exon 1 of 7) 5' UTR (NM_001098634, exon 1 of 7) 153 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr5-711 chr5 180352282 180352526 + 10.4 0.000 intron (NM_005110, intron 1 of 18) CpG 932 NM_005110 9945 Hs.696497 NM_005110 ENSG00000131459 GFPT2 GFAT|GFAT 2|GFAT2 glutamine-fructose-6-phosphate transaminase 2 protein-coding chrX-242 chrX 38511221 38511465 + 10.4 0.000 Intergenic AluJb|SINE|Alu -50135 NM_004615 7102 Hs.441664 NM_004615 ENSG00000156298 TSPAN7 A15|CCG-B7|CD231|DXS1692E|MRX58|MXS1|TALLA-1|TM4SF2|TM4SF2b tetraspanin 7 protein-coding chr20-546 chr20 20133335 20133579 + 10.4 0.000 intron (NM_015585, intron 8 of 26) MLT1H|LTR|ERVL-MaLR 76811 NM_001167816 26074 Hs.729168 NM_015585 ENSG00000089101 CFAP61 C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4 cilia and flagella associated protein 61 protein-coding chr2-1421 chr2 240985870 240986114 + 10.4 0.000 intron (NM_001351305, intron 28 of 31) intron (NM_001351305, intron 28 of 31) -12626 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr10-1001 chr10 67764462 67764706 + 10.4 0.000 Intergenic tRNA-Ser-TCA|tRNA|tRNA -68389 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding chr5-895 chr5 78633964 78634208 + 10.4 0.000 intron (NM_005779, intron 1 of 4) intron (NM_005779, intron 1 of 4) 14686 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr9-742 chr9 136316354 136316598 + 10.4 0.000 Intergenic Intergenic -9575 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr5-912 chr5 113626498 113626742 + 10.4 0.000 Intergenic AluSx3|SINE|Alu 112926 NM_022828 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding chr5-798 chr5 138453527 138453771 + 10.4 0.000 Intergenic Intergenic -11830 NM_001964 1958 Hs.326035 NM_001964 ENSG00000120738 EGR1 AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225 early growth response 1 protein-coding chr2-1866 chr2 171160699 171160943 + 10.4 0.000 promoter-TSS (NM_012290) promoter-TSS (NM_012290) 72 NM_012290 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding chr17-722 chr17 81651312 81651556 + 10.4 0.000 intron (NR_026872, intron 2 of 2) intron (NR_026872, intron 2 of 2) 2280 NM_001365725 5148 Hs.654482 NM_002602 ENSG00000185527 PDE6G PDEG|RP57 phosphodiesterase 6G protein-coding chr2-1583 chr2 240442113 240442357 + 10.4 0.000 intron (NM_002081, intron 1 of 8) intron (NM_002081, intron 1 of 8) 6572 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding chr2-1637 chr2 25049474 25049718 + 10.4 0.000 intron (NM_001319099, intron 1 of 22) intron (NM_001319099, intron 1 of 22) 7133 NM_001319099 22979 Hs.4892 NM_014971 ENSG00000084710 EFR3B KIAA0953 EFR3 homolog B protein-coding chr17-1122 chr17 29243784 29244028 + 10.4 0.000 Intergenic Intergenic -2951 NM_005208 1411 Hs.46275 NM_005208 ENSG00000108255 CRYBA1 CRYB1|CTRCT10 crystallin beta A1 protein-coding chr6-235 chr6 170146190 170146434 + 10.4 0.000 Intergenic Intergenic -14330 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr9-952 chr9 122375133 122375377 + 10.4 0.000 promoter-TSS (NM_001271165) promoter-TSS (NM_001271165) -47 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding chr12-1283 chr12 131849965 131850209 + 10.4 0.000 intron (NM_016155, intron 9 of 9) CpG 21694 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding chr20-158 chr20 7008449 7008693 + 10.4 0.000 Intergenic L1MD2|LINE|L1 240885 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr16-1147 chr16 66925437 66925681 + 10.4 0.000 promoter-TSS (NM_004165) promoter-TSS (NM_004165) -23 NM_001128850 6236 Hs.1027 NM_004165 ENSG00000166592 RRAD RAD|RAD1|REM3 RRAD, Ras related glycolysis inhibitor and calcium channel regulator protein-coding chr3-1371 chr3 109685439 109685683 + 10.4 0.000 Intergenic LTR25|LTR|ERV1 82733 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA chrX-556 chrX 135973810 135974054 + 10.4 0.000 promoter-TSS (NM_001330000) promoter-TSS (NM_001330000) 56 NM_001330000 93380 Hs.110702 NM_173470 ENSG00000169446 MMGT1 EMC5|TMEM32 membrane magnesium transporter 1 protein-coding chr1-2688 chr1 245154858 245155102 + 10.4 0.000 promoter-TSS (NM_018012).2 promoter-TSS (NM_018012).2 -5 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding chr17-1134 chr17 41489834 41490078 + 10.4 0.000 promoter-TSS (NM_003771) promoter-TSS (NM_003771) -92 NM_003771 8689 Hs.248189 NM_003771 ENSG00000126337 KRT36 HA6|KRTHA6|hHa6 keratin 36 protein-coding chr2-1580 chr2 239677434 239677678 + 10.4 0.000 Intergenic Intergenic -85304 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr20-647 chr20 62151319 62151563 + 10.4 0.000 intron (NM_198935, intron 1 of 10) intron (NM_198935, intron 1 of 10) 7672 NM_001301778 26039 Hs.154429 NM_015558 ENSG00000184402 SS18L1 CREST|LP2261 SS18L1 subunit of BAF chromatin remodeling complex protein-coding chr9-390 chr9 83804606 83804850 + 10.4 0.000 intron (NM_025211, intron 3 of 12) SVA_D|Retroposon|SVA 13041 NM_025211 80318 Hs.522255 NM_025211 ENSG00000165113 GKAP1 FKSG21|GKAP42 G kinase anchoring protein 1 protein-coding chr17-1296 chr17 39223942 39224186 + 10.4 0.000 intron (NM_001351360, intron 1 of 10) intron (NM_001351360, intron 1 of 10) 1881 NM_198993 342667 Hs.145068 NM_198993 ENSG00000141750 STAC2 24b2|24b2/STAC2 SH3 and cysteine rich domain 2 protein-coding chr2-1349 chr2 190881509 190881753 + 10.4 0.000 intron (NM_014905, intron 1 of 17) CpG 810 NM_014905 2744 Hs.116448 NM_014905 ENSG00000115419 GLS AAD20|CASGID|EIEE71|GAC|GAM|GDPAG|GLS1|KGA glutaminase protein-coding chr12-903 chr12 120710500 120710744 + 10.4 0.000 exon (NM_001080533, exon 1 of 5) exon (NM_001080533, exon 1 of 5) 164 NM_001080533 84747 Hs.127610 NM_032661 ENSG00000175970 UNC119B POC7B unc-119 lipid binding chaperone B protein-coding chr2-1683 chr2 43611899 43612143 + 10.4 0.000 Intergenic (TTCTT)n|Simple_repeat|Simple_repeat -15975 NM_001345925 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding chr12-1234 chr12 116539884 116540128 + 10.4 0.000 Intergenic Intergenic 6571 NR_027346 100287569 Hs.441601 NM_207436 ENSG00000196668 LINC00173 NCRNA00173 long intergenic non-protein coding RNA 173 ncRNA chr5-601 chr5 120464172 120464416 + 10.4 0.000 promoter-TSS (NM_001300783) promoter-TSS (NM_001300783) -6 NM_001300783 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding chr3-829 chr3 38590000 38590244 + 10.4 0.000 intron (NM_198056, intron 14 of 27) MER5B|DNA|hAT-Charlie 59550 NM_198056 6331 Hs.517898 NM_000335 ENSG00000183873 SCN5A CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1 sodium voltage-gated channel alpha subunit 5 protein-coding KI270776.1-1 KI270776.1 140963 141207 + 10.4 0.000 NA NA NA NA chr6-769 chr6 168459495 168459739 + 10.4 0.000 intron (NM_001166412, intron 1 of 12) intron (NM_001166412, intron 1 of 12) 18433 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr2-887 chr2 2728639 2728883 + 10.4 0.000 Intergenic Intergenic 397265 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr5-690 chr5 142006658 142006902 + 10.4 0.000 intron (NM_005471, intron 3 of 6) intron (NM_005471, intron 3 of 6) 6247 NM_005471 10007 Hs.633853 NM_005471 ENSG00000113552 GNPDA1 GNP1|GNPDA|GNPI|GPI|HLN glucosamine-6-phosphate deaminase 1 protein-coding chr3-719 chr3 47283018 47283262 + 10.4 0.000 promoter-TSS (NM_182902) promoter-TSS (NM_182902) 196 NM_025010 23276 Hs.517946 NM_025010 ENSG00000114648 KLHL18 - kelch like family member 18 protein-coding chr10-1010 chr10 72095885 72096129 + 10.4 0.000 TTS (NM_001198799) TTS (NM_001198799) -6975 NM_014767 9806 Hs.523009 NM_014767 ENSG00000107742 SPOCK2 testican-2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 protein-coding chr2-1590 chr2 241725384 241725628 + 10.4 0.000 3' UTR (NM_032329, exon 8 of 8) 3' UTR (NM_032329, exon 8 of 8) -9124 NR_109778 728294 Hs.516813 NM_152783 ENSG00000180902 D2HGDH D2HGD D-2-hydroxyglutarate dehydrogenase protein-coding chr18-275 chr18 35240306 35240550 + 10.4 0.000 promoter-TSS (NM_032347) promoter-TSS (NM_032347) -606 NM_001135178 84307 Hs.591061 NM_032347 ENSG00000186812 ZNF397 ZNF47|ZSCAN15 zinc finger protein 397 protein-coding chr4-552 chr4 140755640 140755884 + 10.4 0.000 intron (NM_015130, intron 1 of 20) intron (NM_015130, intron 1 of 20) 623 NM_015130 23158 Hs.480819 NM_015130 ENSG00000109436 TBC1D9 GRAMD9|MDR1 TBC1 domain family member 9 protein-coding chr2-1510 chr2 124305105 124305349 + 10.4 0.000 intron (NM_130773, intron 3 of 23) AluJb|SINE|Alu 279940 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding chr1-2372 chr1 46389147 46389391 + 10.4 0.000 Intergenic AluY|SINE|Alu -5048 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr6-535 chr6 104533809 104534053 + 10.4 0.000 Intergenic (AC)n|Simple_repeat|Simple_repeat 325615 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr8-99 chr8 141871937 141872181 + 10.4 0.000 Intergenic Intergenic -85746 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA chr3-504 chr3 185616664 185616908 + 10.4 0.000 intron (NM_021627, intron 11 of 16) AluY|SINE|Alu 30491 NM_021627 59343 Hs.401388 NM_021627 ENSG00000163904 SENP2 AXAM2|SMT3IP2 SUMO specific peptidase 2 protein-coding chr17-927 chr17 7090646 7090890 + 10.4 0.000 Intergenic AluSx1|SINE|Alu -10517 NM_001330070 10462 Hs.54403 NM_006344 ENSG00000132514 CLEC10A CD301|CLECSF13|CLECSF14|HML|HML2|MGL C-type lectin domain containing 10A protein-coding chr12-893 chr12 110908510 110908754 + 10.4 0.000 Intergenic Alu|SINE|Alu 11968 NM_000432 4633 Hs.75535 NM_000432 ENSG00000111245 MYL2 CMH10|MLC-2s/v|MLC2 myosin light chain 2 protein-coding chr5-596 chr5 104632392 104632636 + 10.4 0.000 Intergenic (GA)n|Simple_repeat|Simple_repeat -466960 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo chr15-439 chr15 77765234 77765478 + 10.4 0.000 intron (NM_001301186, intron 2 of 5) AluSz|SINE|Alu 21693 NM_001301195 84894 Hs.656765 NM_032808 ENSG00000169783 LINGO1 LERN1|LRRN6A|MRT64|UNQ201 leucine rich repeat and Ig domain containing 1 protein-coding chr13-441 chr13 32748261 32748505 + 10.4 0.000 intron (NM_015032, intron 24 of 34) intron (NM_015032, intron 24 of 34) 161931 NM_015032 23047 Hs.744901 NM_015032 ENSG00000083642 PDS5B APRIN|AS3|CG008 PDS5 cohesin associated factor B protein-coding chr12-1168 chr12 82074529 82074773 + 10.4 0.000 Intergenic AluJb|SINE|Alu 120932 NR_110089 101928449 Hs.737488 NR_110089 ENSG00000257747 LINC02426 - long intergenic non-protein coding RNA 2426 ncRNA chr11-821 chr11 102731019 102731263 + 10.4 0.000 Intergenic Intergenic -6187 NM_001304441 4317 Hs.161839 NM_002424 ENSG00000118113 MMP8 CLG1|HNC|MMP-8|PMNL-CL matrix metallopeptidase 8 protein-coding chr6-879 chr6 168671406 168671650 + 10.4 0.000 Intergenic Intergenic 230344 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr15-412 chr15 34946585 34946829 + 10.4 0.000 intron (NM_014691, intron 5 of 34) SVA_D|Retroposon|SVA 23035 NM_014691 9716 Hs.510958 NM_014691 ENSG00000021776 AQR IBP160|fSAP164 aquarius intron-binding spliceosomal factor protein-coding chr7-1088 chr7 36515987 36516231 + 10.4 0.000 intron (NM_001177506, intron 20 of 21) (AC)n|Simple_repeat|Simple_repeat 84011 NR_046764 100874264 Hs.690994 NR_046764 ENSG00000230539 AOAH-IT1 - AOAH intronic transcript 1 ncRNA chr11-1510 chr11 62694812 62695056 + 10.3 0.000 intron (NM_001122955, intron 3 of 10) intron (NM_001122955, intron 3 of 10) -5404 NM_203422 221091 Hs.427449 NM_203422 ENSG00000177363 LRRN4CL - LRRN4 C-terminal like protein-coding chr7-1384 chr7 115506488 115506732 + 10.3 0.000 Intergenic AluJo|SINE|Alu 74831 NR_145801 109623459 NR_145801 ENSG00000202377 SNORA25B - small nucleolar RNA, H/ACA box 25B snoRNA chr6-590 chr6 25988297 25988541 + 10.3 0.000 3' UTR (NM_006355, exon 8 of 8) 3' UTR (NM_006355, exon 8 of 8) 25617 NM_006355 10475 Hs.584851 NM_006355 ENSG00000112343 TRIM38 RNF15|RORET tripartite motif containing 38 protein-coding chr17-842 chr17 7208193 7208437 + 10.3 0.000 intron (NM_001365, intron 3 of 21) intron (NM_001365, intron 3 of 21) -1044 NM_001369566 1742 Hs.463928 NM_001365 ENSG00000132535 DLG4 PSD95|SAP-90|SAP90 discs large MAGUK scaffold protein 4 protein-coding chr10-432 chr10 101442144 101442388 + 10.3 0.000 intron (NM_001256856, intron 2 of 13) (TC)n|Simple_repeat|Simple_repeat 88101 NM_003939 8945 Hs.643802 NM_003939 ENSG00000166167 BTRC BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP beta-transducin repeat containing E3 ubiquitin protein ligase protein-coding chr2-1814 chr2 126788081 126788325 + 10.3 0.000 Intergenic Intergenic -110687 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr19-1491 chr19 7860738 7860982 + 10.3 0.000 intron (NM_001159944, intron 14 of 19) intron (NM_001159944, intron 14 of 19) 13530 NM_001190467 80164 Hs.288540 NM_001080403 ENSG00000183248 PRR36 - proline rich 36 protein-coding chr1-2533 chr1 157993589 157993833 + 10.3 0.000 promoter-TSS (NM_018240) promoter-TSS (NM_018240) 66 NM_018240 55243 Hs.272234 NM_018240 ENSG00000183853 KIRREL1 KIRREL|NEPH1 kirre like nephrin family adhesion molecule 1 protein-coding chr17-1321 chr17 44232143 44232387 + 10.3 0.000 Intergenic AluSz|SINE|Alu -10961 NR_045058 7343 Hs.89781 NM_014233 ENSG00000108312 UBTF CONDBA|NOR-90|UBF|UBF-1|UBF1|UBF2 upstream binding transcription factor protein-coding chr17-768 chr17 39927114 39927358 + 10.3 0.000 promoter-TSS (NM_001320803) promoter-TSS (NM_001320803) 365 NM_139280 94103 Hs.514151 NM_016471 ENSG00000172057 ORMDL3 - ORMDL sphingolipid biosynthesis regulator 3 protein-coding chr2-1397 chr2 231563481 231563725 + 10.3 0.000 Intergenic Intergenic -29261 NM_152614 165100 Hs.98104 NM_152614 ENSG00000177673 TEX44 C2orf57 testis expressed 44 protein-coding chr19-1056 chr19 4232894 4233138 + 10.3 0.000 intron (NM_005755, intron 2 of 4) intron (NM_005755, intron 2 of 4) 3493 NM_005755 10148 Hs.501452 NM_005755 ENSG00000105246 EBI3 IL-27B|IL27B|IL35B Epstein-Barr virus induced 3 protein-coding chr15-349 chr15 38849641 38849885 + 10.3 0.000 Intergenic MER45C|DNA|hAT-Tip100 153165 NR_160786 chr7-1430 chr7 139778135 139778379 + 10.3 0.000 promoter-TSS (NM_022740) promoter-TSS (NM_022740) 15 NM_001130966 6916 Hs.520757 NM_001061 ENSG00000059377 TBXAS1 BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS thromboxane A synthase 1 protein-coding chr19-1178 chr19 6361929 6362173 + 10.3 0.000 intron (NM_006012, intron 2 of 5) intron (NM_006012, intron 2 of 5) 520 NM_006012 8192 Hs.515092 NM_006012 ENSG00000125656 CLPP DFNB81|PRLTS3 caseinolytic mitochondrial matrix peptidase proteolytic subunit protein-coding chr2-1887 chr2 189580605 189580849 + 10.3 0.000 promoter-TSS (NM_014585) promoter-TSS (NM_014585) 84 NM_014585 30061 Hs.643005 NM_014585 ENSG00000138449 SLC40A1 FPN1|HFE4|IREG1|MST079|MSTP079|MTP1|SLC11A3 solute carrier family 40 member 1 protein-coding chr18-218 chr18 9613863 9614107 + 10.3 0.000 promoter-TSS (NR_110773) promoter-TSS (NR_110773) 574 NM_001042388 9989 Hs.743236 NM_005134 ENSG00000154845 PPP4R1 MEG1|PP4(Rmeg)|PP4R1 protein phosphatase 4 regulatory subunit 1 protein-coding chr16-650 chr16 49855600 49855844 + 10.3 0.000 intron (NM_001271620, intron 1 of 7) CpG 2197 NM_001271620 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding chr20-285 chr20 62509614 62509858 + 10.3 0.000 Intergenic Intergenic -33741 NM_080473 140628 Hs.352250 NM_080473 ENSG00000130700 GATA5 CHTD5|GATAS|bB379O24.1 GATA binding protein 5 protein-coding chr9-1120 chr9 127214471 127214715 + 10.3 0.000 intron (NM_001190729, intron 16 of 17) intron (NM_001190729, intron 16 of 17) -49069 NM_001286779 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr6-359 chr6 95904828 95905072 + 10.3 0.000 Intergenic Intergenic -111024 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding chr1-1834 chr1 151099970 151100214 + 10.3 0.000 intron (NM_001323912, intron 5 of 7) intron (NM_001323912, intron 5 of 7) 29331 NM_001323913 126626 Hs.15671 NM_144618 ENSG00000143458 GABPB2 GABPB-2 GA binding protein transcription factor subunit beta 2 protein-coding chr5-457 chr5 52424663 52424907 + 10.3 0.000 Intergenic Intergenic -363131 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding chr9-796 chr9 111896740 111896984 + 10.3 0.000 promoter-TSS (NM_003358) promoter-TSS (NM_003358) 48 NM_003358 7357 Hs.304249 NM_003358 ENSG00000148154 UGCG GCS|GLCT1 UDP-glucose ceramide glucosyltransferase protein-coding chr11-1345 chr11 99784550 99784794 + 10.3 0.000 intron (NM_175566, intron 1 of 21) L1PA8|LINE|L1 228527 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding chr6-929 chr6 24961495 24961739 + 10.3 0.000 intron (NM_001286446, intron 1 of 13) MIR|SINE|MIR -25657 NM_001286445 9750 Hs.559459 NM_014722 ENSG00000111913 RIPOR2 C6orf32|DFNB104|DIFF40|DIFF48|FAM65B|MYONAP|PL48 RHO family interacting cell polarization regulator 2 protein-coding chr4-469 chr4 114604341 114604585 + 10.3 0.000 intron (NM_001322114, intron 1 of 5) (T)n|Simple_repeat|Simple_repeat 5178 NM_001322114 7368 Hs.144197 NM_003360 ENSG00000174607 UGT8 CGT|UGT4 UDP glycosyltransferase 8 protein-coding chr22-610 chr22 18972776 18973020 + 10.3 0.000 intron (NR_045121, intron 1 of 2) intron (NR_045121, intron 1 of 2) 2400 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr18-198 chr18 23780123 23780367 + 10.3 0.000 intron (NM_001127717, intron 11 of 73) L2a|LINE|L2 90792 NR_130106 3909 Hs.436367 NM_000227 ENSG00000053747 LAMA3 BM600|E170|LAMNA|LOCS laminin subunit alpha 3 protein-coding chr19-1541 chr19 17324375 17324619 + 10.3 0.000 intron (NM_020959, intron 17 of 17) intron (NM_020959, intron 17 of 17) 10358 NM_020959 57719 Hs.590990 NM_020959 ENSG00000074855 ANO8 KIAA1623|TMEM16H anoctamin 8 protein-coding chr20-602 chr20 43027344 43027588 + 10.3 0.000 intron (NM_133170, intron 1 of 31) AluSx1|SINE|Alu 58723 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr1-2046 chr1 65147496 65147740 + 10.3 0.000 promoter-TSS (NM_203464) promoter-TSS (NM_203464) 69 NM_203464 205 Hs.10862 NM_013410 ENSG00000162433 AK4 AK 4|AK3|AK3L1|AK3L2 adenylate kinase 4 protein-coding chr8-644 chr8 65573756 65574000 + 10.3 0.000 Intergenic AluSc8|SINE|Alu -11212 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA chr17-553 chr17 50483104 50483348 + 10.3 0.000 intron (NM_018346, intron 5 of 8) FLAM_A|SINE|Alu 4366 NM_018346 55316 Hs.8033 NM_018346 ENSG00000136444 RSAD1 HemW radical S-adenosyl methionine domain containing 1 protein-coding chr12-765 chr12 100926926 100927170 + 10.3 0.000 intron (NM_001286616, intron 2 of 26) L2a|LINE|L2 25402 NM_001286616 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding chr11-1598 chr11 75730879 75731123 + 10.3 0.000 intron (NM_025098, intron 5 of 5) intron (NM_025098, intron 5 of 5) 13163 NM_025098 80168 Hs.288568 NM_025098 ENSG00000166391 MOGAT2 DGAT2L5|DGAT2L5.|MGAT2|hDC5 monoacylglycerol O-acyltransferase 2 protein-coding chr20-601 chr20 42883681 42883925 + 10.3 0.000 intron (NM_133170, intron 2 of 31) (AC)n|Simple_repeat|Simple_repeat -84940 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA chr22-522 chr22 44289589 44289833 + 10.3 0.000 intron (NM_001099294, intron 3 of 4) intron (NM_001099294, intron 3 of 4) 23240 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr13-421 chr13 19180892 19181136 + 10.3 0.000 intron (NM_006001, intron 1 of 4) intron (NM_006001, intron 1 of 4) 810 NM_006001 7278 Hs.349695 NM_006001 ENSG00000198033 TUBA3C TUBA2|bA408E5.3 tubulin alpha 3c protein-coding chr13-191 chr13 102093643 102093887 + 10.3 0.000 intron (NM_175929, intron 1 of 4) Tigger2|DNA|TcMar-Tigger -47761 NR_039854 100616239 NR_039854 ENSG00000264482 MIR4705 - microRNA 4705 ncRNA chr17-681 chr17 15849999 15850243 + 10.3 0.000 Intergenic AluY|SINE|Alu -32379 NR_110839 101928567 Hs.569757 NR_110839 ENSG00000237057 LINC02087 - long intergenic non-protein coding RNA 2087 ncRNA chr20-482 chr20 31879695 31879939 + 10.3 0.000 promoter-TSS (NM_001367620) promoter-TSS (NM_001367620) 0 NR_160277 164395 Hs.712915 NM_001008409 ENSG00000131044 TTLL9 C20orf125 tubulin tyrosine ligase like 9 protein-coding chr10-1099 chr10 18216592 18216836 + 10.3 0.000 intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) -44008 NM_001330060 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding chr6-589 chr6 17987711 17987955 + 10.3 0.000 promoter-TSS (NM_022113) promoter-TSS (NM_022113) -198 NM_001105566 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr17-495 chr17 45172569 45172813 + 10.3 0.000 Intergenic Intergenic -1206 NR_135646 105371795 Hs.569733 NR_135646 ENSG00000267288 LOC105371795 - uncharacterized LOC105371795 ncRNA chr7-650 chr7 102448607 102448851 + 10.3 0.000 3' UTR (NM_001271818, exon 4 of 4) 3' UTR (NM_001271818, exon 4 of 4) 15154 NM_001271819 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr3-995 chr3 113838425 113838669 + 10.3 0.000 promoter-TSS (NM_017577) promoter-TSS (NM_017577) -241 NM_017577 54762 Hs.24583 NM_017577 ENSG00000178075 GRAMD1C - GRAM domain containing 1C protein-coding chr2-1773 chr2 100083398 100083642 + 10.3 0.000 intron (NM_001025108, intron 2 of 23) intron (NM_001025108, intron 2 of 23) 22063 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding chrY-10 chrY 11022804 11023048 + 10.3 0.000 Intergenic Intergenic 1112128 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chrX-424 chrX 18556744 18556988 + 10.3 0.000 intron (NM_001037343, intron 4 of 21) AluSx|SINE|Alu 114642 NM_001037343 6792 Hs.659851 NM_003159 ENSG00000008086 CDKL5 CFAP247|EIEE2|ISSX|STK9 cyclin dependent kinase like 5 protein-coding chr19-1575 chr19 33205455 33205699 + 10.3 0.000 exon (NM_002333, exon 5 of 7) exon (NM_002333, exon 5 of 7) 11247 NM_002333 4037 Hs.515340 NM_002333 ENSG00000130881 LRP3 - LDL receptor related protein 3 protein-coding chr19-1215 chr19 17981975 17982219 + 10.3 0.000 exon (NM_002248, exon 5 of 11) exon (NM_002248, exon 5 of 11) -19027 NM_001025604 27106 Hs.515249 NM_015683 ENSG00000105643 ARRDC2 CLONE24945|PP2703 arrestin domain containing 2 protein-coding chr1-2570 chr1 179091396 179091640 + 10.3 0.000 intron (NM_022371, intron 4 of 5) intron (NM_022371, intron 4 of 5) 9448 NM_022371 64222 Hs.584957 NM_022371 ENSG00000186283 TOR3A ADIR|ADIR2 torsin family 3 member A protein-coding chr7-1039 chr7 140508514 140508758 + 10.3 0.000 Intergenic AluSz|SINE|Alu -29067 NR_117084 23608 Hs.744883 NM_013446 ENSG00000133606 MKRN1 RNF61 makorin ring finger protein 1 protein-coding chr7-852 chr7 102416542 102416786 + 10.3 0.000 intron (NR_038967, intron 8 of 8) L1MC3|LINE|L1 -10809 NR_031669 100313829 NR_031669 ENSG00000221510 MIR548O MIRN548O microRNA 548o ncRNA chr2-1264 chr2 74473562 74473806 + 10.3 0.000 3' UTR (NM_032779, exon 9 of 9) 3' UTR (NM_032779, exon 9 of 9) -1004 NM_053050 116540 Hs.534527 NM_053050 ENSG00000204822 MRPL53 L53MT mitochondrial ribosomal protein L53 protein-coding chr12-940 chr12 18422123 18422367 + 10.3 0.000 intron (NM_001288774, intron 17 of 32) intron (NM_001288774, intron 17 of 32) 160705 NM_001288774 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding chr17-544 chr17 8406464 8406708 + 10.3 0.000 Intergenic AluSz|SINE|Alu -8759 NM_001146684 643904 Hs.526550 NM_001146684 ENSG00000189051 RNF222 - ring finger protein 222 protein-coding chr4-340 chr4 118591481 118591725 + 10.3 0.000 promoter-TSS (NR_109983) promoter-TSS (NR_109983) -141 NR_109983 729218 Hs.448518 NR_103825 LOC729218 - uncharacterized LOC729218 pseudo chr12-690 chr12 109866727 109866971 + 10.3 0.000 intron (NM_016433, intron 1 of 4) AluJo|SINE|Alu 13692 NM_016433 51228 Hs.381256 NM_016433 ENSG00000139433 GLTP - glycolipid transfer protein protein-coding chr5-1033 chr5 54361775 54362019 + 10.3 0.000 intron (NR_126379, intron 1 of 4) intron (NR_126379, intron 1 of 4) 40953 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA chr11-1487 chr11 47466987 47467231 + 10.3 0.000 3' UTR (NM_001025596, exon 13 of 13) 3' UTR (NM_001025596, exon 13 of 13) -17973 NM_005055 5913 Hs.81218 NM_005055 ENSG00000165917 RAPSN CMS11|CMS4C|FADS|FADS2|RAPSYN|RNF205 receptor associated protein of the synapse protein-coding chr7-566 chr7 45842608 45842852 + 10.3 0.000 Intergenic Intergenic 37501 NR_146388 730234 Hs.714106 NR_146388 LOC730234 - uncharacterized LOC730234 ncRNA chr22-406 chr22 42863130 42863374 + 10.3 0.000 Intergenic AluY|SINE|Alu -5979 NM_014570 26286 Hs.685225 NM_014570 ENSG00000242247 ARFGAP3 ARFGAP1 ADP ribosylation factor GTPase activating protein 3 protein-coding chr1-2386 chr1 53311049 53311293 + 10.3 0.000 intron (NM_004631, intron 2 of 18) intron (NM_004631, intron 2 of 18) 16899 NM_033300 7804 Hs.280387 NM_004631 ENSG00000157193 LRP8 APOER2|HSZ75190|LRP-8|MCI1 LDL receptor related protein 8 protein-coding chr16-808 chr16 28211147 28211391 + 10.3 0.000 intron (NM_001270940, intron 1 of 24) CpG 696 NM_015171 23214 Hs.460468 NM_015171 ENSG00000169180 XPO6 EXP6|RANBP20 exportin 6 protein-coding chr17-1240 chr17 8963422 8963666 + 10.3 0.000 intron (NM_001142633, intron 1 of 18) AluJr|SINE|Alu 2163 NM_001251851 23533 Hs.278901 NM_014308 ENSG00000141506 PIK3R5 F730038I15Rik|FOAP-2|P101-PI3K|p101 phosphoinositide-3-kinase regulatory subunit 5 protein-coding chr1-1980 chr1 6134018 6134262 + 10.3 0.000 exon (NM_015557, exon 20 of 42) exon (NM_015557, exon 20 of 42) 46181 NM_015557 26038 Hs.522898 NM_015557 ENSG00000116254 CHD5 CHD-5 chromodomain helicase DNA binding protein 5 protein-coding chr18-158 chr18 4865807 4866051 + 10.3 0.000 Intergenic L1MEf|LINE|L1 -215253 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA chr4-503 chr4 7135169 7135413 + 10.1 0.000 Intergenic MIRc|SINE|MIR -31915 NR_027441 730971 Hs.591718 NR_027441 LINC02447 - long intergenic non-protein coding RNA 2447 ncRNA chr2-405 chr2 130181894 130182138 + 10.1 0.000 promoter-TSS (NM_001330282) promoter-TSS (NM_001330282) -246 NM_025029 80097 Hs.469925 NM_025029 ENSG00000152082 MZT2B FAM128B|MOZART2B mitotic spindle organizing protein 2B protein-coding chr6-823 chr6 80163235 80163479 + 10.1 0.000 intron (NR_134945, intron 3 of 10) L2a|LINE|L2 56686 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding chr12-540 chr12 98645587 98645831 + 10.1 0.000 promoter-TSS (NM_153687) promoter-TSS (NM_153687) 409 NM_181869 317 Hs.552567 NM_001160 ENSG00000120868 APAF1 APAF-1|CED4 apoptotic peptidase activating factor 1 protein-coding chr9-1279 chr9 107130562 107130806 + 10.1 0.000 Intergenic AluSz6|SINE|Alu -27696 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA chr7-1121 chr7 76051166 76051410 + 10.1 0.000 intron (NM_001282404, intron 1 of 7) intron (NM_001282404, intron 1 of 7) 3182 NR_104165 4191 Hs.520967 NM_005918 ENSG00000146701 MDH2 EIEE51|M-MDH|MDH|MGC:3559|MOR1 malate dehydrogenase 2 protein-coding chr11-1602 chr11 76304563 76304807 + 10.1 0.000 Intergenic Intergenic 76280 NR_130898 5612 Hs.503315 NM_004705 ENSG00000137492 THAP12 DAP4|P52rIPK|PRKRIR|THAP0 THAP domain containing 12 protein-coding chr4-832 chr4 118394841 118395085 + 10.1 0.000 Intergenic AluJr4|SINE|Alu -41960 NM_003619 8492 Hs.445857 NM_003619 ENSG00000164099 PRSS12 BSSP-3|BSSP3|MRT1 serine protease 12 protein-coding chr16-1139 chr16 63608085 63608329 + 10.1 0.000 Intergenic Intergenic 1513856 NM_001330576 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding chr2-1347 chr2 189664662 189664906 + 10.1 0.000 intron (NM_001353494, intron 2 of 3) L1ME4a|LINE|L1 3325 NM_019048 54529 Hs.101364 NM_019048 ENSG00000138381 ASNSD1 NBLA00058|NS3TP1 asparagine synthetase domain containing 1 protein-coding chr1-2525 chr1 156138897 156139141 + 10.1 0.000 intron (NM_170707, intron 11 of 11) intron (NM_170707, intron 11 of 11) -10925 NM_001370569 64218 Hs.408846 NM_022367 ENSG00000196189 SEMA4A CORD10|RP35|SEMAB|SEMB semaphorin 4A protein-coding chr6-447 chr6 25343094 25343338 + 10.1 0.000 intron (NM_001173977, intron 2 of 36) intron (NM_001173977, intron 2 of 36) 63842 NM_001173977 55604 Hs.649550 NM_017640 ENSG00000079691 CARMIL1 CARMIL|CARMIL1a|LRRC16|LRRC16A|dJ501N12.1|dJ501N12.5 capping protein regulator and myosin 1 linker 1 protein-coding chr7-1076 chr7 5479189 5479433 + 10.1 0.000 3' UTR (NM_001367781, exon 5 of 5) 3' UTR (NM_001367781, exon 5 of 5) 16606 NR_030318 693174 NR_030318 ENSG00000207973 MIR589 MIRN589|hsa-mir-589|mir-589 microRNA 589 ncRNA chr5-972 chr5 1590048 1590292 + 10.1 0.000 intron (NR_003263, intron 2 of 6) AluSx|SINE|Alu 4361 NR_003263 728609 Hs.379186 NR_003263 SDHAP3 SDHACL|SDHAL succinate dehydrogenase complex flavoprotein subunit A pseudogene 3 pseudo chr5-665 chr5 72848765 72849009 + 10.1 0.000 intron (NM_001364293, intron 2 of 24) CpG-22173 748 NM_153188 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding chr4-301 chr4 152937650 152937894 + 10.1 0.000 promoter-TSS (NR_136614) promoter-TSS (NR_136614) -935 NR_136614 729870 Hs.310357 NR_136614 LOC729870 - uncharacterized LOC729870 ncRNA chr7-1244 chr7 28409047 28409291 + 10.1 0.000 intron (NM_182899, intron 1 of 9) CpG -3349 NM_182898 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding chr19-1397 chr19 53254775 53255019 + 10.1 0.000 promoter-TSS (NM_182609) promoter-TSS (NM_182609) 6 NM_182609 342926 Hs.20506 NM_182609 ENSG00000197928 ZNF677 - zinc finger protein 677 protein-coding chr7-1104 chr7 50792300 50792544 + 10.1 0.000 intron (NM_001001555, intron 1 of 16) intron (NM_001001555, intron 1 of 16) 452 NM_001350815 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding chr15-706 chr15 78750971 78751215 + 10.1 0.000 promoter-TSS (NR_036495) promoter-TSS (NR_036495) -944 NR_036495 646938 Hs.449783 NR_036495 ENSG00000238166 LOC646938 - TBC1 domain family member 2B pseudogene pseudo chr8-553 chr8 30112928 30113172 + 10.1 0.000 intron (NM_001128208, intron 3 of 3) AluSz|SINE|Alu 17642 NM_015344 23484 Hs.146585 NM_015344 ENSG00000104660 LEPROTL1 HSPC112|Vps55|my047 leptin receptor overlapping transcript like 1 protein-coding chr19-1336 chr19 10446448 10446692 + 10.1 0.000 intron (NM_001111309, intron 2 of 14) intron (NM_001111309, intron 2 of 14) -6362 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr2-947 chr2 61778761 61779005 + 10.1 0.000 Intergenic AluJr4|SINE|Alu 75177 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chr1-1782 chr1 85048217 85048461 + 10.1 0.000 intron (NM_018298, intron 1 of 12) CpG 161 NM_018298 55283 Hs.535239 NM_018298 ENSG00000055732 MCOLN3 TRP-ML3|TRPML3 mucolipin 3 protein-coding chr15-515 chr15 77201059 77201303 + 10.1 0.000 intron (NM_024776, intron 4 of 7) intron (NM_024776, intron 4 of 7) 24223 NR_026813 81698 Hs.656938 NM_030944 LINC00597 C15orf5 long intergenic non-protein coding RNA 597 ncRNA chr9-1150 chr9 137063482 137063726 + 10.1 0.000 3' UTR (NM_178448, exon 6 of 6) 3' UTR (NM_178448, exon 6 of 6) 6953 NM_178448 89958 Hs.19322 NM_178448 ENSG00000186193 SAPCD2 C9orf140|p42.3 suppressor APC domain containing 2 protein-coding chr2-1990 chr2 239593372 239593616 + 10.1 0.000 Intergenic Intergenic -169366 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA chr10-1157 chr10 52912943 52913187 + 10.1 0.000 Intergenic Intergenic -141365 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding chr8-893 chr8 72536960 72537204 + 10.1 0.000 promoter-TSS (NM_004770) promoter-TSS (NM_004770) -143 NM_004770 9312 Hs.661102 NM_004770 ENSG00000182674 KCNB2 KV2.2 potassium voltage-gated channel subfamily B member 2 protein-coding chr22-362 chr22 50339884 50340128 + 10.1 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat -3321 NM_001351647 9701 Hs.449098 NM_014678 ENSG00000100239 PPP6R2 KIAA0685|PP6R2|SAP190|SAPS2 protein phosphatase 6 regulatory subunit 2 protein-coding chr15-461 chr15 40649466 40649710 + 10.1 0.000 intron (NM_144508, intron 17 of 25) AluSz6|SINE|Alu 45517 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr2-1454 chr2 30266055 30266299 + 10.1 0.000 Intergenic Intergenic 34643 NM_030915 81606 Hs.567598 NM_030915 ENSG00000213626 LBH - LBH regulator of WNT signaling pathway protein-coding chr10-914 chr10 112447286 112447530 + 10.1 0.000 promoter-TSS (NM_001303134) promoter-TSS (NM_001303134) 164 NM_001363544 64429 Hs.196990 NM_022494 ENSG00000023041 ZDHHC6 DHHC-6|ZNF376 zinc finger DHHC-type containing 6 protein-coding chr6-394 chr6 42746821 42747065 + 10.1 0.000 promoter-TSS (NM_003192) promoter-TSS (NM_003192) -44 NM_001318819 23506 Hs.658033 NM_015349 ENSG00000112624 BICRAL GLTSCR1L|KIAA0240 BRD4 interacting chromatin remodeling complex associated protein like protein-coding chr2-1595 chr2 3045933 3046177 + 10.1 0.000 intron (NR_110228, intron 3 of 6) (TG)n|Simple_repeat|Simple_repeat 79971 NR_110228 101927554 Hs.638446 NR_110228 ENSG00000234423 LINC01250 - long intergenic non-protein coding RNA 1250 ncRNA chr19-1321 chr19 2960993 2961237 + 10.1 0.000 Intergenic AluY|SINE|Alu -16144 NM_021217 58492 Hs.38004 NM_021217 ENSG00000175691 ZNF77 pT1 zinc finger protein 77 protein-coding chr12-1262 chr12 124295281 124295525 + 10.1 0.000 5' UTR (NM_001365156, exon 1 of 3) 5' UTR (NM_001365156, exon 1 of 3) 310 NM_001365156 144347 Hs.432901 NM_181709 ENSG00000178882 RFLNA CFM2|FAM101A refilin A protein-coding chr7-1137 chr7 102313880 102314124 + 10.1 0.000 intron (NM_020979, intron 4 of 8) MER39B|LTR|ERV1 20899 NR_036245 100422858 NR_036245 ENSG00000264675 MIR4285 - microRNA 4285 ncRNA chr15-428 chr15 62332292 62332536 + 10.1 0.000 Intergenic SVA_D|Retroposon|SVA -10615 NR_106733 102464834 NR_106733 ENSG00000275451 MIR6085 hsa-mir-6085 microRNA 6085 ncRNA chr14-475 chr14 61321382 61321626 + 10.1 0.000 promoter-TSS (NM_006255) promoter-TSS (NM_006255) 61 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding chr1-2227 chr1 9835768 9836012 + 10.1 0.000 Intergenic Intergenic -11364 NM_001302883 22883 Hs.29665 NM_014944 ENSG00000171603 CLSTN1 ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 calsyntenin 1 protein-coding chrX-215 chrX 110002854 110003098 + 10.1 0.000 promoter-TSS (NM_032227) promoter-TSS (NM_032227) -138 NM_032227 84187 Hs.496572 NM_017698 ENSG00000157600 TMEM164 bB360B22.3 transmembrane protein 164 protein-coding chr15-709 chr15 78996537 78996781 + 10.1 0.000 intron (NM_001145648, intron 19 of 26) intron (NM_001145648, intron 19 of 26) 9001 NM_153815 5923 Hs.459035 NM_002891 ENSG00000058335 RASGRF1 CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1 Ras protein specific guanine nucleotide releasing factor 1 protein-coding chr6-614 chr6 99854698 99854942 + 10.1 0.000 Intergenic AluJr|SINE|Alu -139218 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA chr12-1092 chr12 48904041 48904285 + 10.1 0.000 promoter-TSS (NM_033124) promoter-TSS (NM_033124) 30 NM_001286957 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding chr1-1935 chr1 226737854 226738098 + 10.1 0.000 intron (NM_002221, intron 1 of 7) CpG 1199 NM_002221 3707 Hs.528087 NM_002221 ENSG00000143772 ITPKB IP3-3KB|IP3K|IP3K-B|IP3KB|PIG37 inositol-trisphosphate 3-kinase B protein-coding chr11-1289 chr11 57376424 57376668 + 10.1 0.000 TTS (NM_006093) TTS (NM_006093) 4604 NM_006093 10394 Hs.251386 NM_006093 ENSG00000156575 PRG3 MBP2|MBPH proteoglycan 3, pro eosinophil major basic protein 2 protein-coding chr10-622 chr10 24038507 24038751 + 10.1 0.000 intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -170162 NM_001282768 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding chr15-659 chr15 60362787 60363031 + 10.1 0.000 intron (NM_001002857, intron 5 of 13) AluSz6|SINE|Alu 35077 NM_004039 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding chr16-529 chr16 50482006 50482250 + 10.1 0.000 Intergenic AluJb|SINE|Alu -66268 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding chr6-540 chr6 109483125 109483369 + 10.1 0.000 promoter-TSS (NM_014797) promoter-TSS (NM_014797) -10 NM_014797 9841 Hs.409876 NM_014797 ENSG00000112365 ZBTB24 BIF1|ICF2|PATZ2|ZNF450 zinc finger and BTB domain containing 24 protein-coding chr17-1147 chr17 48307867 48308111 + 10.1 0.000 TTS (NR_131239) TTS (NR_131239) 13642 NR_131239 105371807 Hs.661105 NR_131239 ENSG00000235300 THRA1/BTR - uncharacterized LOC105371807 ncRNA chr5-1102 chr5 132191430 132191674 + 10.1 0.000 3' UTR (NM_001365678, exon 16 of 16) 3' UTR (NM_001365678, exon 16 of 16) 6676 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA chr22-583 chr22 39176167 39176411 + 10.1 0.000 Intergenic Intergenic -23609 NM_001346744 23492 Hs.356416 NM_175709 ENSG00000100307 CBX7 - chromobox 7 protein-coding chr9-671 chr9 94797539 94797783 + 10.1 0.000 intron (NM_001193331, intron 4 of 7) L1ME2|LINE|L1 -12301 NR_031755 100313780 NR_031755 ENSG00000252153 MIR2278 mir-2278 microRNA 2278 ncRNA chr1-1837 chr1 151838131 151838375 + 10.1 0.000 promoter-TSS (NR_024237) promoter-TSS (NR_024237) -24 NR_152846 100132111 Hs.697059 NR_024237 C2CD4D-AS1 - C2CD4D and THEM5 antisense RNA 1 ncRNA chr2-931 chr2 44972252 44972496 + 10.1 0.000 Intergenic AluSc|SINE|Alu -30496 NR_103786 100506108 Hs.503113 NR_103785 ENSG00000236502 SIX3-AS1 SIX3OS SIX3 antisense RNA 1 ncRNA chr5-761 chr5 78648726 78648970 + 10.1 0.000 promoter-TSS (NM_005779) promoter-TSS (NM_005779) -76 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding chr1-1272 chr1 10659199 10659443 + 10.1 0.000 intron (NM_001079843, intron 6 of 20) intron (NM_001079843, intron 6 of 20) 137325 NM_001079843 54897 Hs.439894 NM_017766 ENSG00000130940 CASZ1 CAS11|CST|SRG|ZNF693|dJ734G22.1 castor zinc finger 1 protein-coding chr16-1192 chr16 83940672 83940916 + 10.1 0.000 Intergenic L2b|LINE|L2 -12446 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr13-452 chr13 39231554 39231798 + 10.1 0.000 Intergenic MLT2A1|LTR|ERVL 193220 NM_001012754 387921 Hs.507783 NM_001012754 ENSG00000188811 NHLRC3 - NHL repeat containing 3 protein-coding chr4-242 chr4 87220463 87220707 + 10.1 0.000 promoter-TSS (NR_120447) promoter-TSS (NR_120447) 33 NM_001292007 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding chrX-442 chrX 41754906 41755150 + 9.98 0.000 intron (NM_003688, intron 3 of 26) AluSc|SINE|Alu 30847 NM_080817 27197 Hs.567457 NM_080817 ENSG00000171657 GPR82 - G protein-coupled receptor 82 protein-coding chr2-1491 chr2 95249186 95249430 + 9.98 0.000 Intergenic AluSx3|SINE|Alu -25141 NM_144707 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding chr10-1285 chr10 113647515 113647759 + 9.98 0.000 intron (NM_001322945, intron 9 of 40) intron (NM_001322945, intron 9 of 40) 16404 NM_198060 4892 Hs.268788 NM_006175 ENSG00000197893 NRAP N-RAP nebulin related anchoring protein protein-coding chr15-672 chr15 66679785 66680029 + 9.98 0.000 intron (NR_110372, intron 3 of 4) intron (NR_110372, intron 3 of 4) -22329 NM_005585 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr22-740 chr22 48633215 48633459 + 9.98 0.000 intron (NM_015381, intron 1 of 3) intron (NM_015381, intron 1 of 3) 56997 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding chr6-833 chr6 102763371 102763615 + 9.98 0.000 Intergenic MLT1H2-int|LTR|ERVL-MaLR 1364508 NM_175768 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding chr2-1467 chr2 45614967 45615211 + 9.98 0.000 Intergenic AluSx1|SINE|Alu -3822 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding chr16-968 chr16 83814309 83814553 + 9.98 0.000 3' UTR (NM_001537, exon 4 of 4) 3' UTR (NM_001537, exon 4 of 4) 6453 NM_001537 3281 Hs.250899 NM_001537 ENSG00000230989 HSBP1 NPC-A-13 heat shock factor binding protein 1 protein-coding chr7-1007 chr7 102616578 102616822 + 9.98 0.000 promoter-TSS (NM_006989) promoter-TSS (NM_006989) 56 NM_001367767 100271927 Hs.530089 NM_001277335 ENSG00000170667 RASA4B - RAS p21 protein activator 4B protein-coding chr12-725 chr12 6829175 6829419 + 9.98 0.000 intron (NM_014262, intron 1 of 14) CpG 890 NM_014262 10536 Hs.631655 NM_014262 ENSG00000110811 P3H3 GRCB|HSU47926|LEPREL2 prolyl 3-hydroxylase 3 protein-coding chr10-601 chr10 128126424 128126668 + 9.98 0.000 promoter-TSS (NM_002417) promoter-TSS (NM_002417) -123 NM_001145966 4288 Hs.80976 NM_002417 ENSG00000148773 MKI67 KIA|MIB-|MIB-1|PPP1R105 marker of proliferation Ki-67 protein-coding chrX-418 chrX 12098150 12098394 + 9.98 0.000 intron (NM_001368402, intron 1 of 17) A-rich|Low_complexity|Low_complexity 32731 NM_001368402 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr7-1299 chr7 51267341 51267585 + 9.98 0.000 intron (NM_015198, intron 1 of 12) (AT)n|Simple_repeat|Simple_repeat 49346 NM_001346443 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding chr12-508 chr12 9404504 9404748 + 9.98 0.000 intron (NR_144634, intron 2 of 8) intron (NR_144634, intron 2 of 8) 2788 NR_144634 728715 NR_144634 LOC728715 - ovostatin homolog 2 ncRNA chr19-943 chr19 11465018 11465262 + 9.98 0.000 intron (NM_032281, intron 3 of 6) (AC)n|Simple_repeat|Simple_repeat 15906 NM_032281 1995 Hs.1701 NM_001420 ENSG00000196361 ELAVL3 HUC|HUCL|PLE21 ELAV like RNA binding protein 3 protein-coding chr13-383 chr13 43776703 43776947 + 9.98 0.000 intron (NM_001347966, intron 1 of 17) LTR33A_|LTR|ERVL 10147 NM_001242863 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr2-1996 chr2 241020319 241020563 + 9.98 0.000 intron (NM_001080437, intron 1 of 31) HERVL40-int|LTR|ERVL 21823 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding chr19-1047 chr19 2436479 2436723 + 9.98 0.000 intron (NM_032737, intron 4 of 11) CpG -1601 NR_106958 102466806 NR_106958 ENSG00000283728 MIR7108 hsa-mir-7108 microRNA 7108 ncRNA chr4-1008 chr4 81471902 81472146 + 9.98 0.000 promoter-TSS (NM_001300735) promoter-TSS (NM_001300735) -117 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding chr20-467 chr20 3112239 3112483 + 9.98 0.000 intron (NR_038395, intron 5 of 6) intron (NR_038395, intron 5 of 6) 5450 NR_038395 100134015 Hs.129448 NR_038395 ENSG00000235958 UBOX5-AS1 - UBOX5 antisense RNA 1 ncRNA chr19-625 chr19 13721896 13722140 + 9.98 0.000 Intergenic AluJo|SINE|Alu -9734 NM_001320561 81576 Hs.24998 NM_030818 ENSG00000104957 CCDC130 - coiled-coil domain containing 130 protein-coding chr3-1080 chr3 192571706 192571950 + 9.98 0.000 intron (NM_004113, intron 2 of 5) intron (NM_004113, intron 2 of 5) 56806 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA chr2-1513 chr2 131044911 131045155 + 9.98 0.000 intron (NM_001367493, intron 12 of 13) intron (NM_001367493, intron 12 of 13) 48129 NM_001321748 130074 Hs.534679 NM_001009993 ENSG00000152102 FAM168B MANI family with sequence similarity 168 member B protein-coding chrX-470 chrX 57927402 57927646 + 9.98 0.000 Intergenic AluSx3|SINE|Alu -16891 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding chr6-612 chr6 85671987 85672231 + 9.98 0.000 Intergenic FLAM_C|SINE|Alu 5259 NR_002743 26799 NR_002743 SNORD50A RNU50|U50 small nucleolar RNA, C/D box 50A snoRNA chr11-1605 chr11 77516681 77516925 + 9.98 0.000 Intergenic AluJo|SINE|Alu -42740 NM_001128620 5058 Hs.435714 NM_002576 ENSG00000149269 PAK1 IDDMSSD|PAKalpha p21 (RAC1) activated kinase 1 protein-coding chr5-716 chr5 756735 756979 + 9.98 0.000 intron (NM_001351303, intron 1 of 10) intron (NM_001351303, intron 1 of 10) 10062 NM_001351303 653082 NM_001351303 ENSG00000206077 ZDHHC11B DHHC-11B zinc finger DHHC-type containing 11B protein-coding chr14-626 chr14 54902772 54903016 + 9.98 0.000 promoter-TSS (NM_001024070) promoter-TSS (NM_001024070) -68 NM_001024070 2643 Hs.86724 NM_000161 ENSG00000131979 GCH1 DYT14|DYT5|DYT5a|GCH|GTP-CH-1|GTPCH1|HPABH4B GTP cyclohydrolase 1 protein-coding chr11-1349 chr11 106733981 106734225 + 9.98 0.000 intron (NM_000855, intron 6 of 7) intron (NM_000855, intron 6 of 7) 284373 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding chr18-318 chr18 24293148 24293392 + 9.98 0.000 intron (NM_001242508, intron 2 of 15) LTR33|LTR|ERVL 18236 NM_001242508 114876 Hs.370725 NM_018030 ENSG00000141447 OSBPL1A ORP-1|ORP1|OSBPL1B oxysterol binding protein like 1A protein-coding chr16-1106 chr16 33713559 33713803 + 9.98 0.000 Intergenic (TGGCCC)n|Simple_repeat|Simple_repeat -55696 NR_130771 104644205 Hs.742548 NR_130771 ENPP7P13 DUNQU1 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 13 pseudo chr17-1114 chr17 16938608 16938852 + 9.98 0.000 TTS (NM_012452) TTS (NM_012452) -5554 NR_147084 96597 NR_147084 TBC1D27P TBC1D27 TBC1 domain family member 27, pseudogene pseudo chr20-160 chr20 28897997 28898241 + 9.98 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat -182271 NR_132316 102723316 NR_132316 FRG1DP - FSHD region gene 1 family member D, pseudogene pseudo chr16-829 chr16 58392728 58392972 + 9.98 0.000 intron (NM_001126130, intron 1 of 1) CpG 379 NM_022770 64785 Hs.47125 NM_022770 ENSG00000181938 GINS3 PSF3 GINS complex subunit 3 protein-coding chr17-917 chr17 2255352 2255596 + 9.98 0.000 intron (NM_017575, intron 8 of 18) L2b|LINE|L2 10711 NM_001256827 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr4-314 chr4 16226583 16226827 + 9.98 0.000 promoter-TSS (NM_153365) promoter-TSS (NM_153365) 42 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA chr20-363 chr20 5224121 5224365 + 9.98 0.000 Intergenic Tigger14a|DNA|TcMar-Tigger 92489 NM_144773 128674 Hs.375029 NM_144773 ENSG00000101292 PROKR2 GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3 prokineticin receptor 2 protein-coding chr20-493 chr20 38461518 38461762 + 9.98 0.000 Intergenic SVA_D|Retroposon|SVA -11203 NM_001282918 57148 Hs.598850 NM_020336 ENSG00000170471 RALGAPB KIAA1219|RalGAPbeta Ral GTPase activating protein non-catalytic beta subunit protein-coding chr3-781 chr3 144681710 144681954 + 9.98 0.000 Intergenic Intergenic 708751 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr14-752 chr14 76433941 76434185 + 9.98 0.000 intron (NM_004452, intron 3 of 10) AluSx|SINE|Alu 62716 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr4-578 chr4 2717314 2717558 + 9.98 0.000 intron (NM_003704, intron 18 of 18) AluSz|SINE|Alu 38900 NM_001161527 79155 Hs.368551 NM_024309 ENSG00000168884 TNIP2 ABIN2|FLIP1|KLIP TNFAIP3 interacting protein 2 protein-coding chr19-1665 chr19 53395584 53395828 + 9.98 0.000 intron (NM_001040185, intron 1 of 3) intron (NM_001040185, intron 1 of 3) 557 NM_001350496 110116772 NM_001350496 ZNF765-ZNF761 - ZNF765-ZNF761 readthrough protein-coding chr1-2194 chr1 3567564 3567808 + 9.98 0.000 intron (NM_001409, intron 4 of 36) intron (NM_001409, intron 4 of 36) -6896 NR_030277 693135 NR_030277 ENSG00000207776 MIR551A MIRN551A|mir-551a microRNA 551a ncRNA chrX-461 chrX 50398708 50398952 + 9.98 0.000 intron (NM_001013742, intron 8 of 27) intron (NM_001013742, intron 8 of 27) 71995 NM_001013742 139189 Hs.38132 NM_001013742 ENSG00000274588 DGKK - diacylglycerol kinase kappa protein-coding chr3-755 chr3 107872342 107872586 + 9.98 0.000 intron (NR_024276, intron 3 of 7) Tigger3b|DNA|TcMar-Tigger 5604 NR_015414 151658 Hs.159043 NR_015414 ENSG00000241469 LINC00635 - long intergenic non-protein coding RNA 635 ncRNA chr13-389 chr13 55075903 55076147 + 9.98 0.000 Intergenic AluYm1|SINE|Alu -98429 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr2-1861 chr2 166411251 166411495 + 9.98 0.000 intron (NR_045628, intron 23 of 25) MER44C|DNA|TcMar-Tigger -35386 NM_002977 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding chr5-259 chr5 38571386 38571630 + 9.98 0.000 intron (NR_103554, intron 1 of 8) AluSx1|SINE|Alu -13947 NR_037423 100500824 NR_037423 ENSG00000265304 MIR3650 - microRNA 3650 ncRNA chr12-819 chr12 41553446 41553690 + 9.98 0.000 intron (NM_001164595, intron 6 of 9) AluJr4|SINE|Alu 115829 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding chr1-2325 chr1 32352017 32352261 + 9.98 0.000 Intergenic Intergenic 10104 NM_001167676 100128071 Hs.512763 NM_001167676 ENSG00000225828 FAM229A - family with sequence similarity 229 member A protein-coding chr6-715 chr6 111483536 111483780 + 9.98 0.000 promoter-TSS (NM_002912) promoter-TSS (NM_002912) 53 NM_001286431 5980 Hs.232021 NM_002912 ENSG00000009413 REV3L POLZ|REV3 REV3 like, DNA directed polymerase zeta catalytic subunit protein-coding chr6-946 chr6 34099457 34099701 + 9.98 0.000 intron (NM_001256809, intron 1 of 8) intron (NM_001256809, intron 1 of 8) 6388 NM_001256813 2914 Hs.429018 NM_000841 ENSG00000124493 GRM4 GPRC1D|MGLUR4|mGlu4 glutamate metabotropic receptor 4 protein-coding chr22-719 chr22 44329298 44329542 + 9.98 0.000 Intergenic Intergenic -16469 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding chr7-809 chr7 1873387 1873631 + 9.98 0.000 intron (NM_001013837, intron 18 of 18) intron (NM_001013837, intron 18 of 18) -29256 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA chr11-1574 chr11 72103455 72103699 + 9.98 0.000 promoter-TSS (NM_017907) promoter-TSS (NM_017907) -280 NM_017907 55004 Hs.731528 NM_017907 ENSG00000149357 LAMTOR1 C11orf59|PDRO|Ragulator1|p18|p27RF-Rho late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 protein-coding chr8-669 chr8 103465956 103466200 + 9.98 0.000 Intergenic Intergenic 33153 NR_145706 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA chr20-375 chr20 41358989 41359233 + 9.98 0.000 TTS (NM_052846) TTS (NM_052846) 7707 NM_052846 90187 Hs.726525 NM_052846 ENSG00000183798 EMILIN3 C20orf130|EMILIN5|dJ620E11.4 elastin microfibril interfacer 3 protein-coding chr15-62 chr15 17080748 17080992 + 9.98 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3201874 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chrX-398 chrX 129529765 129530009 + 9.98 0.000 Intergenic Intergenic -6397 NM_001282875 6594 Hs.152292 NM_003069 ENSG00000102038 SMARCA1 ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SNF2LT|SWI|SWI2|hSNF2L SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein-coding chr7-524 chr7 102433008 102433252 + 9.98 0.000 promoter-TSS (NM_001271818) promoter-TSS (NM_001271818) -400 NM_001271818 80228 Hs.363308 NM_032831 ENSG00000160991 ORAI2 C7orf19|CBCIP2|MEM142B|TMEM142B ORAI calcium release-activated calcium modulator 2 protein-coding chr2-783 chr2 170657161 170657405 + 9.98 0.000 Intergenic AluSx1|SINE|Alu 57284 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr17-1129 chr17 39559659 39559903 + 9.98 0.000 Intergenic AluSc8|SINE|Alu 48139 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr3-1364 chr3 107429390 107429634 + 9.98 0.000 Intergenic Intergenic -1418 NR_110039 101929607 Hs.252565 NR_110039 ENSG00000273125 LINC01990 - long intergenic non-protein coding RNA 1990 ncRNA chr3-1081 chr3 192917969 192918213 + 9.83 0.000 promoter-TSS (NM_178496) promoter-TSS (NM_178496) -235 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding chrX-330 chrX 123749193 123749437 + 9.83 0.000 Intergenic AluSq|SINE|Alu -16263 NM_001081550 57187 Hs.149991 NM_020449 ENSG00000125676 THOC2 CXorf3|MRX12|MRX35|THO2|dJ506G2.1|hTREX120 THO complex 2 protein-coding chr8-935 chr8 106046037 106046281 + 9.83 0.000 intron (NR_125797, intron 1 of 4) intron (NR_125797, intron 1 of 4) 14344 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr10-763 chr10 124615290 124615534 + 9.83 0.000 Intergenic CpG -88616 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr7-1405 chr7 128890694 128890938 + 9.83 0.000 intron (NM_001366122, intron 20 of 39) CpG 19893 NM_001366122 375616 Hs.371746 NM_199349 ENSG00000135253 KCP CRIM2|KCP1|NET67 kielin cysteine rich BMP regulator protein-coding chr22-636 chr22 27438459 27438703 + 9.83 0.000 Intergenic CpG 127930 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA chr15-476 chr15 52179297 52179541 + 9.83 0.000 promoter-TSS (NR_102751) promoter-TSS (NR_102751) 506 NM_006578 10681 Hs.155090 NM_006578 ENSG00000069966 GNB5 GB5|IDDCA|LADCI G protein subunit beta 5 protein-coding chr1-643 chr1 43172576 43172820 + 9.83 0.000 promoter-TSS (NR_106791) promoter-TSS (NR_106791) -128 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding chr17-1261 chr17 18098317 18098561 + 9.83 0.000 intron (NM_001388, intron 3 of 12) intron (NM_001388, intron 3 of 12) -10317 NM_016239 51168 Hs.462390 NM_016239 ENSG00000091536 MYO15A DFNB3|MYO15 myosin XVA protein-coding chr8-910 chr8 92095515 92095759 + 9.83 0.000 promoter-TSS (NM_001198626) promoter-TSS (NM_001198626) 17 NM_001198627 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding chr3-745 chr3 69080112 69080356 + 9.83 0.000 intron (NM_003968, intron 1 of 17) CpG-20009 131 NM_003968 9039 Hs.154320 NM_003968 ENSG00000144744 UBA3 NAE2|UBE1C|hUBA3 ubiquitin like modifier activating enzyme 3 protein-coding chr4-1022 chr4 93031650 93031894 + 9.83 0.000 intron (NM_001286838, intron 2 of 14) THE1B|LTR|ERVL-MaLR 727373 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding chr7-1060 chr7 786502 786746 + 9.83 0.000 TTS (NM_017802) TTS (NM_017802) -28933 NM_001171946 23353 Hs.438072 NM_025154 ENSG00000164828 SUN1 UNC84A Sad1 and UNC84 domain containing 1 protein-coding chr14-756 chr14 78133060 78133304 + 9.83 0.000 Intergenic Intergenic -37191 NR_158975 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr5-1017 chr5 41870304 41870548 + 9.83 0.000 promoter-TSS (NM_001364300) promoter-TSS (NM_001364300) -1 NM_001364301 5019 Hs.278277 NM_000436 ENSG00000083720 OXCT1 OXCT|SCOT 3-oxoacid CoA-transferase 1 protein-coding chr17-678 chr17 6573756 6574000 + 9.83 0.000 Intergenic AluSx|SINE|Alu -17323 NM_031220 83394 Hs.183983 NM_031220 ENSG00000091622 PITPNM3 ACKR6|CORD5|NIR1|RDGBA3 PITPNM family member 3 protein-coding chr9-1187 chr9 26722185 26722429 + 9.83 0.000 Intergenic Intergenic 170495 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding chr14-761 chr14 85587095 85587339 + 9.83 0.000 intron (NM_001346143, intron 1 of 1) intron (NM_001346143, intron 1 of 1) 53868 NM_001346143 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding chr3-1160 chr3 135749861 135750105 + 9.83 0.000 Intergenic AluY|SINE|Alu -215745 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr8-646 chr8 67449751 67449995 + 9.83 0.000 intron (NR_136224, intron 2 of 4) AluSz6|SINE|Alu 106039 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA chrX-332 chrX 129898513 129898757 + 9.83 0.000 Intergenic AluSz|SINE|Alu -7486 NM_001166221 10813 Hs.458598 NM_006649 ENSG00000156697 UTP14A NYCO16|SDCCAG16|Utp14|dJ537K23.3 UTP14A small subunit processome component protein-coding chr10-897 chr10 99779277 99779521 + 9.83 0.000 Intergenic L1MCa|LINE|L1 -3241 NM_000392 1244 Hs.368243 NM_000392 ENSG00000023839 ABCC2 ABC30|CMOAT|DJS|MRP2|cMRP ATP binding cassette subfamily C member 2 protein-coding chr4-1084 chr4 150078425 150078669 + 9.83 0.000 non-coding (NR_036614, exon 1 of 17) non-coding (NR_036614, exon 1 of 17) 102 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding chr22-164 chr22 19135895 19136139 + 9.83 0.000 intron (NM_022719, intron 8 of 9) AluJo|SINE|Alu 4709 NM_053006 23617 Hs.694070 NM_053006 ENSG00000206203 TSSK2 DGS-G|SPOGA2|STK22B|TSK2 testis specific serine kinase 2 protein-coding chr20-519 chr20 2860380 2860624 + 9.83 0.000 exon (NM_080413, exon 5 of 20) exon (NM_080413, exon 5 of 20) -3693 NM_002836 5786 Hs.269577 NM_002836 ENSG00000132670 PTPRA HEPTP|HLPR|HPTPA|HPTPalpha|LRP|PTPA|PTPRL2|R-PTP-alpha|RPTPA protein tyrosine phosphatase receptor type A protein-coding chr1-1523 chr1 75940207 75940451 + 9.83 0.000 Intergenic Tigger3|DNA|TcMar-Tigger -7925 NR_026546 127247 Hs.125423 NM_080868 ENSG00000154007 ASB17 Asb-17 ankyrin repeat and SOCS box containing 17 protein-coding chr13-445 chr13 34657880 34658124 + 9.83 0.000 Intergenic Intergenic -17317 NR_047036 100874179 Hs.569253 NR_047036 ENSG00000225179 LINC00457 - long intergenic non-protein coding RNA 457 ncRNA chr11-1567 chr11 69727849 69728093 + 9.83 0.000 Intergenic Intergenic -23949 NM_005117 9965 Hs.249200 NM_005117 ENSG00000162344 FGF19 - fibroblast growth factor 19 protein-coding chr10-1316 chr10 124678760 124679004 + 9.83 0.000 intron (NM_014661, intron 4 of 4) intron (NM_014661, intron 4 of 4) -25146 NR_120631 101927944 Hs.437448 NR_120630 FAM53B-AS1 - FAM53B antisense RNA 1 ncRNA chr17-868 chr17 49224355 49224599 + 9.83 0.000 exon (NM_178500, exon 3 of 3) exon (NM_178500, exon 3 of 3) 6289 NM_001143804 162466 Hs.405607 NM_178500 ENSG00000173868 PHOSPHO1 - phosphoethanolamine/phosphocholine phosphatase protein-coding chr19-1229 chr19 33458514 33458758 + 9.83 0.000 intron (NM_001166056, intron 7 of 12) (GT)n|Simple_repeat|Simple_repeat 63155 NM_001166057 5184 Hs.36473 NM_000285 ENSG00000124299 PEPD PROLIDASE peptidase D protein-coding chr1-2263 chr1 17561674 17561918 + 9.83 0.000 intron (NR_137287, intron 1 of 29) intron (NR_137287, intron 1 of 29) -18757 NM_001319837 55160 Hs.443460 NM_018125 ENSG00000074964 ARHGEF10L GrinchGEF Rho guanine nucleotide exchange factor 10 like protein-coding chr7-851 chr7 102396094 102396338 + 9.83 0.000 promoter-TSS (NM_024653) promoter-TSS (NM_024653) -147 NM_024653 79706 Hs.722104 NM_024653 ENSG00000128563 PRKRIP1 C114|KRBOX3 PRKR interacting protein 1 protein-coding chr2-806 chr2 231428916 231429160 + 9.83 0.000 Intergenic AluSg|SINE|Alu 26898 NR_002921 654321 Hs.674388 NR_002921 ENSG00000206885 SNORA75 SNORA75A|U23 small nucleolar RNA, H/ACA box 75 snoRNA chr7-1240 chr7 27035181 27035425 + 9.83 0.000 Intergenic AluSx|SINE|Alu 60697 NM_153620 3198 Hs.67397 NM_005522 ENSG00000105991 HOXA1 BSAS|HOX1|HOX1F homeobox A1 protein-coding chr19-1393 chr19 49103573 49103817 + 9.83 0.000 intron (NM_001301069, intron 7 of 9) intron (NM_001301069, intron 7 of 9) -10675 NM_022165 64130 Hs.221737 NM_022165 ENSG00000104863 LIN7B LIN-7B|MALS-2|MALS2|VELI2 lin-7 homolog B, crumbs cell polarity complex component protein-coding chr21-208 chr21 36135462 36135706 + 9.83 0.000 intron (NM_001236, intron 1 of 2) CpG 505 NM_001236 874 Hs.154510 NM_001236 ENSG00000159231 CBR3 HEL-S-25|SDR21C2|hCBR3 carbonyl reductase 3 protein-coding chr3-1346 chr3 79560467 79560711 + 9.83 0.000 intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) 52702 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA chr22-222 chr22 23750941 23751185 + 9.83 0.000 promoter-TSS (NM_021916) promoter-TSS (NM_021916) 49 NM_021916 7621 Hs.382874 NM_021916 ENSG00000187792 ZNF70 Cos17 zinc finger protein 70 protein-coding chr4-259 chr4 39103859 39104103 + 9.83 0.000 intron (NM_199039, intron 6 of 9) AluJb|SINE|Alu 41749 NM_199039 51088 Hs.272251 NM_015990 ENSG00000109790 KLHL5 - kelch like family member 5 protein-coding chr19-1323 chr19 3338210 3338454 + 9.83 0.000 Intergenic AluSx|SINE|Alu -21298 NM_205843 4782 Hs.170131 NM_005597 ENSG00000141905 NFIC CTF|CTF5|NF-I|NFI nuclear factor I C protein-coding chr10-1144 chr10 44339143 44339387 + 9.83 0.000 Intergenic Intergenic 45832 NM_001277990 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding chr2-1851 chr2 154428775 154429019 + 9.83 0.000 intron (NM_052917, intron 11 of 12) AluYh3|SINE|Alu 28541 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA chr13-484 chr13 72925518 72925762 + 9.83 0.000 intron (NR_146206, intron 13 of 16) AluSx1|SINE|Alu -129336 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr10-1265 chr10 103238859 103239103 + 9.83 0.000 Intergenic L2c|LINE|L2 -6906 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr10-977 chr10 16249862 16250106 + 9.83 0.000 Intergenic AluJr|SINE|Alu -186959 NM_001261836 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding chr12-1074 chr12 27780960 27781204 + 9.83 0.000 exon (NM_020782, exon 1 of 3) exon (NM_020782, exon 1 of 3) 849 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding chr1-2506 chr1 151458346 151458590 + 9.83 0.000 intron (NM_001194938, intron 1 of 17) intron (NM_001194938, intron 1 of 17) 1026 NM_145796 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding chr15-256 chr15 40679195 40679439 + 9.83 0.000 Intergenic L1MA3|LINE|L1 15788 NR_040058 100505648 Hs.586876 NR_040058 ENSG00000245849 RAD51-AS1 TODRA RAD51 antisense RNA 1 ncRNA chr19-1039 chr19 1430148 1430392 + 9.83 0.000 exon (NM_018959, exon 10 of 12) exon (NM_018959, exon 10 of 12) -8094 NM_001018 6209 Hs.406683 NM_001018 ENSG00000115268 RPS15 RIG|S15 ribosomal protein S15 protein-coding chr6-834 chr6 104849447 104849691 + 9.83 0.000 intron (NR_146792, intron 3 of 24) AluJr|SINE|Alu 9977 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr19-1527 chr19 13236329 13236573 + 9.83 0.000 intron (NM_023035, intron 31 of 46) intron (NM_023035, intron 31 of 46) 86040 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chrX-349 chrX 153909892 153910136 + 9.83 0.000 exon (NM_001164741, exon 19 of 23) exon (NM_001164741, exon 19 of 23) 5300 NM_000054 554 Hs.567240 NM_000054 ENSG00000126895 AVPR2 ADHR|DI1|DIR|DIR3|NDI|V2R arginine vasopressin receptor 2 protein-coding chr2-891 chr2 10278121 10278365 + 9.83 0.000 Intergenic Intergenic -24661 NM_002149 3241 Hs.580427 NM_002149 ENSG00000115756 HPCAL1 BDR1|HLP2|VILIP-3 hippocalcin like 1 protein-coding chr5-1184 chr5 176609990 176610234 + 9.83 0.000 promoter-TSS (NM_052899) promoter-TSS (NM_052899) 44 NM_052899 114787 Hs.150549 NM_052899 ENSG00000169258 GPRIN1 GRIN1 G protein regulated inducer of neurite outgrowth 1 protein-coding chr8-859 chr8 41957887 41958131 + 9.83 0.000 intron (NM_001305878, intron 8 of 13) intron (NM_001305878, intron 8 of 13) -61268 NM_001142446 286 Hs.654438 NM_000037 ENSG00000029534 ANK1 ANK|SPH1|SPH2 ankyrin 1 protein-coding chr2-1310 chr2 139743761 139744005 + 9.83 0.000 Intergenic AluSq2|SINE|Alu 842802 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr11-1448 chr11 33869885 33870129 + 9.83 0.000 promoter-TSS (NM_001142316) promoter-TSS (NM_001142316) -129 NM_001142316 4005 Hs.34560 NM_005574 ENSG00000135363 LMO2 LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 LIM domain only 2 protein-coding chr3-1319 chr3 58324938 58325182 + 9.83 0.000 TTS (NM_007042) TTS (NM_007042) -7830 NM_001349526 54899 Hs.190544 NM_017771 ENSG00000168297 PXK MONAKA|SLOB PX domain containing serine/threonine kinase like protein-coding chr1-1743 chr1 42854073 42854317 + 9.83 0.000 Intergenic MIRc|SINE|MIR -3427 NR_104171 339539 Hs.434301 NR_104171 LOC339539 - uncharacterized LOC339539 ncRNA chr3-1340 chr3 73101089 73101333 + 9.83 0.000 Intergenic Intergenic 39552 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding chr4-599 chr4 65231255 65231499 + 9.68 0.000 Intergenic AluSx|SINE|Alu -226877 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA chr20-567 chr20 31661616 31661860 + 9.68 0.000 Intergenic Intergenic 23826 NM_032609 84701 Hs.277101 NM_032609 ENSG00000131055 COX4I2 COX4|COX4-2|COX4B|COX4L2|COXIV-2|dJ857M17.2 cytochrome c oxidase subunit 4I2 protein-coding chr19-1498 chr19 8622476 8622720 + 9.68 0.000 Intergenic Intergenic -11883 NM_030957 81794 Hs.657508 NM_030957 ENSG00000142303 ADAMTS10 ADAM-TS10|ADAMTS-10|WMS|WMS1 ADAM metallopeptidase with thrombospondin type 1 motif 10 protein-coding chr1-1151 chr1 32258378 32258622 + 9.68 0.000 intron (NM_005356, intron 1 of 12) AluSx3|SINE|Alu 7235 NM_005356 3932 Hs.470627 NM_005356 ENSG00000182866 LCK IMD22|LSK|YT16|p56lck|pp58lck LCK proto-oncogene, Src family tyrosine kinase protein-coding chr19-1207 chr19 16048243 16048487 + 9.68 0.000 Intergenic AluSc8|SINE|Alu 14245 NR_110321 148231 Hs.631621 NR_024335 ENSG00000167459 LINC00905 - long intergenic non-protein coding RNA 905 ncRNA chr15-396 chr15 74914131 74914375 + 9.68 0.000 Intergenic Intergenic -7359 NR_135842 57184 Hs.367690 NM_020447 ENSG00000178761 FAM219B C15orf17 family with sequence similarity 219 member B protein-coding chr9-651 chr9 36246588 36246832 + 9.68 0.000 intron (NM_001190388, intron 1 of 10) AluSx|SINE|Alu 11738 NM_005476 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding chrX-368 chrX 41253765 41254009 + 9.68 0.000 Intergenic Intergenic -21852 NR_135616 105373185 Hs.546119 NR_135616 ENSG00000223714 LINC02601 - long intergenic non-protein coding RNA 2601 ncRNA chr1-2484 chr1 114862167 114862411 + 9.68 0.000 intron (NM_001282542, intron 8 of 30) intron (NM_001282542, intron 8 of 30) 7426 NR_104211 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding chr7-1341 chr7 95772439 95772683 + 9.68 0.000 promoter-TSS (NM_001278421) promoter-TSS (NM_001278421) 55 NM_001278421 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding chr9-429 chr9 96619504 96619748 + 9.68 0.000 non-coding (NR_147239, exon 1 of 15) non-coding (NR_147239, exon 1 of 15) 217 NR_147239 8555 Hs.40582 NM_003671 ENSG00000081377 CDC14B CDC14B3|Cdc14B1|Cdc14B2|hCDC14B cell division cycle 14B protein-coding chrY-8 chrY 10763014 10763258 + 9.68 0.000 Intergenic (CCATT)n|Simple_repeat|Simple_repeat 852338 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr8-864 chr8 42918989 42919233 + 9.68 0.000 intron (NM_032410, intron 2 of 21) SVA_C|Retroposon|SVA 22133 NM_032410 84376 Hs.162852 NM_032410 ENSG00000168172 HOOK3 HK3 hook microtubule tethering protein 3 protein-coding chr22-709 chr22 41957024 41957268 + 9.68 0.000 intron (NR_024355, intron 1 of 1) intron (NR_024355, intron 1 of 1) 4959 NR_024355 339674 Hs.517656 NR_024355 ENSG00000205704 LINC00634 BK250D10.8 long intergenic non-protein coding RNA 634 ncRNA chr16-810 chr16 29599706 29599950 + 9.68 0.000 promoter-TSS (NR_037451).2 promoter-TSS (NR_037451).2 -563 NR_049833 100847041 NR_049833 ENSG00000266758 MIR3680-2 - microRNA 3680-2 ncRNA chr7-1229 chr7 19090653 19090897 + 9.68 0.000 Intergenic Intergenic 26861 NR_149001 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding chr5-675 chr5 115096674 115096918 + 9.68 0.000 Intergenic AluSx1|SINE|Alu 73112 NM_001300759 55521 Hs.519514 NM_018700 ENSG00000152503 TRIM36 ANPH|HAPRIN|RBCC728|RNF98 tripartite motif containing 36 protein-coding chr5-385 chr5 133009576 133009820 + 9.68 0.000 intron (NM_001300819, intron 1 of 2) intron (NM_001300819, intron 1 of 2) 16851 NM_001308127 54819 Hs.29700 NM_017665 ENSG00000155329 ZCCHC10 - zinc finger CCHC-type containing 10 protein-coding chr11-1312 chr11 64438201 64438445 + 9.68 0.000 Intergenic Intergenic -10734 NR_073177 100996455 Hs.634142 NR_073177 ENSG00000181908 LINC02724 - long intergenic non-protein coding RNA 2724 ncRNA chr17-482 chr17 31448295 31448539 + 9.68 0.000 intron (NM_032932, intron 3 of 14) AluJr|SINE|Alu -39691 NM_001346749 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding chr5-1124 chr5 137622142 137622386 + 9.68 0.000 intron (NM_017415, intron 14 of 14) intron (NM_017415, intron 14 of 14) 25385 NR_030588 100126343 NR_030588 ENSG00000216009 MIR874 MIRN874|hsa-mir-874|mir-874 microRNA 874 ncRNA chr9-1409 chr9 136312562 136312806 + 9.68 0.000 Intergenic Intergenic -5783 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding chr20-612 chr20 46057844 46058088 + 9.68 0.000 3' UTR (NM_001134771, exon 26 of 26) 3' UTR (NM_001134771, exon 26 of 26) 28751 NM_020708 57468 Hs.21413 NM_020708 ENSG00000124140 SLC12A5 EIEE34|EIG14|KCC2|hKCC2 solute carrier family 12 member 5 protein-coding chr1-2369 chr1 45014576 45014820 + 9.68 0.000 intron (NR_036510, intron 7 of 9) intron (NR_036510, intron 7 of 9) 2444 NM_000374 7389 Hs.78601 NM_000374 ENSG00000126088 UROD PCT|UPD uroporphyrinogen decarboxylase protein-coding chr14-611 chr14 31207621 31207865 + 9.68 0.000 promoter-TSS (NM_015382) promoter-TSS (NM_015382) 50 NM_015382 25831 Hs.708017 NM_015382 ENSG00000092148 HECTD1 EULIR HECT domain E3 ubiquitin protein ligase 1 protein-coding chr7-1020 chr7 128463420 128463664 + 9.68 0.000 Intergenic SVA_B|Retroposon|SVA 7664 NM_013332 29923 Hs.706124 NM_013332 ENSG00000135245 HILPDA C7orf68|HIG-2|HIG2 hypoxia inducible lipid droplet associated protein-coding chr2-1587 chr2 240702399 240702643 + 9.68 0.000 Intergenic Intergenic 10655 NM_198998 375318 Hs.534650 NM_198998 ENSG00000184945 AQP12A AQP-12|AQP12|AQPX2 aquaporin 12A protein-coding chr16-1249 chr16 90004403 90004647 + 9.68 0.000 TTS (NM_024043) TTS (NM_024043) 5596 NM_024043 79007 Hs.301394 NM_024043 ENSG00000003249 DBNDD1 - dysbindin domain containing 1 protein-coding chr1-2127 chr1 225427377 225427621 + 9.68 0.000 intron (NM_194442, intron 1 of 13) CpG 539 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding chr19-871 chr19 18214856 18215100 + 9.68 0.000 intron (NM_001369701, intron 11 of 13) intron (NM_001369701, intron 11 of 13) 9515 NM_001098819 5143 Hs.132584 NM_000923 ENSG00000105650 PDE4C DPDE1|PDE21 phosphodiesterase 4C protein-coding chrX-362 chrX 19228883 19229127 + 9.68 0.000 Intergenic MER5B|DNA|hAT-Charlie -106368 NM_001184833 10149 Hs.146978 NM_005756 ENSG00000173698 ADGRG2 CBAVDX|EDDM6|GPR64|HE6|TM7LN2 adhesion G protein-coupled receptor G2 protein-coding chr19-1616 chr19 42676893 42677137 + 9.68 0.000 Intergenic AluY|SINE|Alu 63466 NM_021016 5671 Hs.654413 NM_021016 ENSG00000221826 PSG3 - pregnancy specific beta-1-glycoprotein 3 protein-coding chr10-1269 chr10 103565128 103565372 + 9.68 0.000 intron (NM_004210, intron 1 of 5) intron (NM_004210, intron 1 of 5) -47808 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr6-1026 chr6 83193268 83193512 + 9.68 0.000 promoter-TSS (NM_001322336) promoter-TSS (NM_001322336) 33 NM_001322339 112611 Hs.423336 NM_033411 ENSG00000013392 RWDD2A RWDD2|dJ747H23.2 RWD domain containing 2A protein-coding chr11-1076 chr11 31211988 31212232 + 9.68 0.000 intron (NM_001367979, intron 9 of 38) intron (NM_001367979, intron 9 of 38) 157629 NM_001367979 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding chr14-295 chr14 65442720 65442964 + 9.68 0.000 intron (NR_038170, intron 1 of 10) intron (NR_038170, intron 1 of 10) -28260 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA chr11-1047 chr11 1472194 1472438 + 9.68 0.000 intron (NM_053005, intron 2 of 3) intron (NM_053005, intron 2 of 3) 8570 NM_053005 81532 Hs.370360 NM_053005 ENSG00000182208 MOB2 HCCA2 MOB kinase activator 2 protein-coding chr3-934 chr3 27484426 27484670 + 9.68 0.000 promoter-TSS (NR_135544) promoter-TSS (NR_135544) -164 NM_001321103 9497 Hs.250072 NM_003615 ENSG00000033867 SLC4A7 NBC2|NBC3|NBCN1|SBC2|SLC4A6 solute carrier family 4 member 7 protein-coding chr14-540 chr14 59870686 59870930 + 9.68 0.000 promoter-TSS (NM_021136) promoter-TSS (NM_021136) -32 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding chr1-2552 chr1 168121773 168122017 + 9.68 0.000 intron (NM_001267610, intron 1 of 6) intron (NM_001267610, intron 1 of 6) 14541 NM_001267612 23432 Hs.271809 NM_007369 ENSG00000143147 GPR161 RE2 G protein-coupled receptor 161 protein-coding chr2-1636 chr2 24938783 24939027 + 9.68 0.000 Intergenic Intergenic -18668 NM_001320613 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding chr20-370 chr20 34984878 34985122 + 9.68 0.000 intron (NM_020884, intron 12 of 44) intron (NM_020884, intron 12 of 44) -5376 NR_030223 574501 NR_030223 ENSG00000207635 MIR499A MIR499|MIRN499|hsa-mir-499a|mir-499a microRNA 499a ncRNA chr10-1234 chr10 95187490 95187734 + 9.68 0.000 Intergenic L1PA16|LINE|L1 -6588 NM_207321 142827 Hs.134229 NM_207321 ENSG00000173124 ACSM6 C10orf129|bA310E22.3 acyl-CoA synthetase medium chain family member 6 protein-coding chr10-969 chr10 6247306 6247550 + 9.68 0.000 intron (NM_001363545, intron 14 of 14) intron (NM_001363545, intron 14 of 14) 44496 NM_001323017 5209 Hs.195471 NM_004566 ENSG00000170525 PFKFB3 IPFK2|PFK2|iPFK-2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 protein-coding chr4-1032 chr4 98052053 98052297 + 9.68 0.000 intron (NM_174952, intron 5 of 10) intron (NM_174952, intron 5 of 10) 91301 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding chr19-1470 chr19 4642722 4642966 + 9.68 0.000 intron (NM_001167942, intron 1 of 1) L2a|LINE|L2 2827 NM_001167942 126282 Hs.465643 NM_152362 ENSG00000185361 TNFAIP8L1 TIPE1 TNF alpha induced protein 8 like 1 protein-coding chr12-439 chr12 104958298 104958542 + 9.68 0.000 promoter-TSS (NM_001352170) promoter-TSS (NM_001352170) -130 NM_001352171 84102 Hs.577463 NM_032148 ENSG00000136052 SLC41A2 SLC41A1-L1 solute carrier family 41 member 2 protein-coding chr2-1904 chr2 201476171 201476415 + 9.68 0.000 intron (NM_018571, intron 7 of 11) intron (NM_018571, intron 7 of 11) 24553 NM_001206864 55437 Hs.652338 NM_018571 ENSG00000082146 STRADB ALS2CR2|CALS-21|ILPIP|ILPIPA|PAPK|PRO1038 STE20 related adaptor beta protein-coding chr14-713 chr14 56932395 56932639 + 9.68 0.000 Intergenic L1MC4a|LINE|L1 119359 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA chr17-1473 chr17 82116267 82116511 + 9.68 0.000 intron (NM_001367828, intron 16 of 16) intron (NM_001367828, intron 16 of 16) -18153 NM_004104 2194 Hs.83190 NM_004104 ENSG00000169710 FASN FAS|OA-519|SDR27X1 fatty acid synthase protein-coding chr11-401 chr11 119379804 119380048 + 9.68 0.000 intron (NM_004205, intron 1 of 12) AluYm1|SINE|Alu 1764 NM_004205 9099 Hs.524085 NM_004205 ENSG00000036672 USP2 UBP41|USP9 ubiquitin specific peptidase 2 protein-coding chr14-742 chr14 69779015 69779259 + 9.68 0.000 intron (NM_003049, intron 3 of 4) AluJb|SINE|Alu -11424 NR_029378 100289511 Hs.729250 NR_029378 LOC100289511 - uncharacterized LOC100289511 ncRNA chr19-1383 chr19 46333526 46333770 + 9.68 0.000 intron (NM_152795, intron 13 of 14) intron (NM_152795, intron 13 of 14) -13439 NM_006247 5536 Hs.654604 NM_006247 ENSG00000011485 PPP5C PP5|PPP5|PPT protein phosphatase 5 catalytic subunit protein-coding chr7-657 chr7 117230628 117230872 + 9.68 0.000 TTS (NM_001369598) TTS (NM_001369598) 48069 NR_002332 93655 Hs.368131 NR_002332 ENSG00000004866 ST7-OT3 NCRNA00026|ST7|ST7OT3 ST7 overlapping transcript 3 ncRNA chrX-408 chrX 154019723 154019967 + 9.68 0.000 promoter-TSS (NM_001025243) promoter-TSS (NM_001025243) 57 NM_001025242 3654 Hs.522819 NM_001569 ENSG00000184216 IRAK1 IRAK|pelle interleukin 1 receptor associated kinase 1 protein-coding chrX-483 chrX 70274082 70274326 + 9.68 0.000 intron (NM_004312, intron 5 of 16) AluSz|SINE|Alu 5870 NM_004312 407 Hs.308 NM_004312 ENSG00000120500 ARR3 ARRX|MYP26|cArr arrestin 3 protein-coding chr14-278 chr14 100022176 100022420 + 9.68 0.000 intron (NM_001330221, intron 1 of 13) AluSx|SINE|Alu -43124 NM_016337 51466 Hs.125867 NM_016337 ENSG00000196405 EVL RNB6 Enah/Vasp-like protein-coding chr11-1071 chr11 17645784 17646028 + 9.68 0.000 TTS (NM_001292063) TTS (NM_001292063) 51033 NR_132279 102723330 Hs.471111 NR_132279 ENSG00000255335 LINC02729 - long intergenic non-protein coding RNA 2729 ncRNA chr21-80 chr21 36382405 36382649 + 9.68 0.000 Intergenic Intergenic -2865 NM_005441 8208 Hs.75238 NM_005441 ENSG00000159259 CHAF1B CAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7 chromatin assembly factor 1 subunit B protein-coding chr12-1019 chr12 130996420 130996664 + 9.68 0.000 intron (NM_198827, intron 8 of 24) SVA_D|Retroposon|SVA -2566 NR_131951 105755954 Hs.677534 NR_131950 ADGRD1-AS1 LACAT8 ADGRD1 antisense RNA 1 ncRNA chrX-510 chrX 104608503 104608747 + 9.68 0.000 intron (NM_017416, intron 1 of 10) L1P2|LINE|L1 42426 NM_017416 26280 Hs.675519 NM_017416 ENSG00000189108 IL1RAPL2 IL-1R9|IL1R9|IL1RAPL-2|TIGIRR-1 interleukin 1 receptor accessory protein like 2 protein-coding chr17-1130 chr17 39612159 39612403 + 9.68 0.000 Intergenic Intergenic -4361 NM_006160 4761 Hs.322431 NM_006160 ENSG00000171532 NEUROD2 EIEE72|NDRF|bHLHa1 neuronal differentiation 2 protein-coding chr4-837 chr4 126634975 126635219 + 9.68 0.000 Intergenic Intergenic -997860 NM_015693 27152 Hs.391481 NM_015693 ENSG00000164066 INTU CPLANE4|INT|OFD17|PDZD6|PDZK6|SRTD20 inturned planar cell polarity protein protein-coding chr4-890 chr4 2041907 2042151 + 9.68 0.000 promoter-TSS (NM_001141936) promoter-TSS (NM_001141936) 34 NM_001141936 401115 Hs.446474 NM_001141936 ENSG00000243449 C4orf48 CHR4_55 chromosome 4 open reading frame 48 protein-coding chr2-1071 chr2 26376034 26376278 + 9.68 0.000 intron (NR_137633, intron 6 of 9) intron (NR_137633, intron 6 of 9) -25764 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr3-1011 chr3 126357510 126357754 + 9.68 0.000 promoter-TSS (NM_014079) promoter-TSS (NM_014079) -224 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding chr2-956 chr2 84971348 84971592 + 9.68 0.000 intron (NM_020122, intron 1 of 6) CpG 309 NM_020122 56888 Hs.654968 NM_020122 ENSG00000176407 KCMF1 DEBT91|FIGC|PCMF|ZZZ1 potassium channel modulatory factor 1 protein-coding chr10-793 chr10 15262071 15262315 + 9.53 0.000 intron (NM_001010924, intron 3 of 7) L2|LINE|L2 -93500 NM_001308295 9397 Hs.60339 NM_004808 ENSG00000152465 NMT2 - N-myristoyltransferase 2 protein-coding chr11-1607 chr11 79440718 79440962 + 9.53 0.000 5' UTR (NM_001098816, exon 1 of 34) 5' UTR (NM_001098816, exon 1 of 34) 190 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr13-204 chr13 30839358 30839602 + 9.53 0.000 Intergenic SVA_D|Retroposon|SVA 36274 NR_047012 100874158 Hs.577982 NR_047012 ENSG00000237879 LINC00398 - long intergenic non-protein coding RNA 398 ncRNA chr2-1570 chr2 232441466 232441710 + 9.53 0.000 Intergenic Intergenic -14565 NM_001631 248 Hs.37009 NM_001631 ENSG00000163295 ALPI IAP alkaline phosphatase, intestinal protein-coding chr15-601 chr15 88913267 88913511 + 9.53 0.000 promoter-TSS (NM_001310321) promoter-TSS (NM_001310321) -10 NM_005928 4240 Hs.3745 NM_005928 ENSG00000140545 MFGE8 BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47 milk fat globule-EGF factor 8 protein protein-coding KI270757.1-1 KI270757.1 16453 16697 + 9.53 0.000 NA NA NA NA chr10-631 chr10 41893769 41894013 + 9.53 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 474154 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr17-602 chr17 24188144 24188388 + 9.53 0.000 Intergenic ALR/Alpha|Satellite|centr 1665155 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chrX-384 chrX 95574291 95574535 + 9.53 0.000 Intergenic AluYa5|SINE|Alu -511187 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA chr2-855 chr2 126804817 126805061 + 9.53 0.000 Intergenic AluJb|SINE|Alu -93951 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding chr12-1012 chr12 123461142 123461386 + 9.53 0.000 intron (NM_180699, intron 1 of 1) AluY|SINE|Alu 1560 NM_180699 11066 Hs.632738 NM_007020 ENSG00000184209 SNRNP35 HM-1|U1SNRNPBP small nuclear ribonucleoprotein U11/U12 subunit 35 protein-coding chr1-706 chr1 44727180 44727424 + 9.53 0.000 Intergenic AluSx4|SINE|Alu 3866 NR_002755 26830 NR_002755 ENSG00000200169 RNU5D-1 RNU5D|U5DL|U5DS RNA, U5D small nuclear 1 snRNA chr10-1139 chr10 41869319 41869563 + 9.53 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 498604 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo chr14-360 chr14 41673740 41673984 + 9.53 0.000 intron (NM_001346173, intron 1 of 4) SVA_D|Retroposon|SVA 67006 NR_144388 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding chr3-1245 chr3 37806364 37806608 + 9.53 0.000 intron (NM_002207, intron 27 of 27) intron (NM_002207, intron 27 of 27) 55294 NR_110532 101928153 Hs.657314 NR_110531 ENSG00000235257 ITGA9-AS1 - ITGA9 antisense RNA 1 ncRNA chr16-399 chr16 68866713 68866957 + 9.53 0.000 intron (NM_024562, intron 3 of 17) AluSx|SINE|Alu 23304 NM_024562 79613 Hs.13526 NM_024562 ENSG00000103047 TANGO6 TMCO7 transport and golgi organization 6 homolog protein-coding chr7-1416 chr7 131024524 131024768 + 9.53 0.000 intron (NR_109850, intron 3 of 5) AluJb|SINE|Alu 82384 NR_024153 378805 Hs.150556 NM_001085379 ENSG00000231721 LINC-PINT LincRNA-Pint|MKLN1-AS1|PINT long intergenic non-protein coding RNA, p53 induced transcript ncRNA chr5-267 chr5 80238683 80238927 + 9.53 0.000 intron (NR_126061, intron 1 of 13) AluSx1|SINE|Alu 17243 NM_001174071 256987 Hs.288232 NM_178276 ENSG00000164300 SERINC5 C5orf12|TPO1 serine incorporator 5 protein-coding chr13-458 chr13 43786835 43787079 + 9.53 0.000 promoter-TSS (NM_001347968) promoter-TSS (NM_001347968) 15 NM_001242863 55068 Hs.128258 NM_017993 ENSG00000120658 ENOX1 CNOX|PIG38|bA64J21.1|cCNOX ecto-NOX disulfide-thiol exchanger 1 protein-coding chr5-680 chr5 131935092 131935336 + 9.53 0.000 intron (NM_001303622, intron 4 of 12) AluJb|SINE|Alu 10449 NM_001303622 728637 Hs.631802 NM_001278059 ENSG00000239642 MEIKIN - meiotic kinetochore factor protein-coding chrX-527 chrX 118479330 118479574 + 9.53 0.000 Intergenic AluJo|SINE|Alu -16457 NM_144658 139818 Hs.368203 NM_144658 ENSG00000147251 DOCK11 ACG|ZIZ2|bB128O4.1 dedicator of cytokinesis 11 protein-coding chr1-1554 chr1 155008218 155008462 + 9.53 0.000 intron (NR_049765, intron 2 of 3) intron (NR_049765, intron 2 of 3) 5710 NM_001252406 51043 Hs.729279 NM_001252406 ENSG00000160685 ZBTB7B CKROX|THPOK|ZBTB15|ZFP-67|ZFP67|ZNF857B|c-KROX|hcKROX zinc finger and BTB domain containing 7B protein-coding chr20-300 chr20 44362296 44362540 + 9.53 0.000 intron (NM_175914, intron 1 of 9) AluSx1|SINE|Alu 6617 NM_001287183 3172 Hs.116462 NM_000457 ENSG00000101076 HNF4A FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14 hepatocyte nuclear factor 4 alpha protein-coding GL000216.2-14 GL000216.2 19384 19628 + 9.53 0.000 NA NA NA NA chr21-122 chr21 45530828 45531072 + 9.53 0.000 exon (NM_001205207, exon 3 of 5) exon (NM_001205207, exon 3 of 5) 3806 NM_001205207 6573 Hs.84190 NM_003056 ENSG00000173638 SLC19A1 CHMD|FOLT|IFC-1|IFC1|REFC|RFC|RFC1 solute carrier family 19 member 1 protein-coding chr10-1152 chr10 49051232 49051476 + 9.53 0.000 intron (NM_001031746, intron 5 of 7) L1MC1|LINE|L1 64168 NM_144984 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding chr19-1545 chr19 18088420 18088664 + 9.53 0.000 intron (NM_001290024, intron 1 of 17) AluJb|SINE|Alu -1608 NM_001290023 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr9-839 chr9 137064392 137064636 + 9.53 0.000 3' UTR (NM_178448, exon 6 of 6) 3' UTR (NM_178448, exon 6 of 6) 6043 NM_178448 89958 Hs.19322 NM_178448 ENSG00000186193 SAPCD2 C9orf140|p42.3 suppressor APC domain containing 2 protein-coding chr9-1308 chr9 121599387 121599631 + 9.53 0.000 intron (NM_032552, intron 1 of 16) CpG 32407 NM_032552 153090 Hs.522378 NM_032552 ENSG00000136848 DAB2IP AF9Q34|AIP-1|AIP1|DIP1/2 DAB2 interacting protein protein-coding chr22-441 chr22 32205943 32206187 + 9.53 0.000 intron (NR_149072, intron 1 of 3) REP522|Satellite|telo 950 NR_149072 110806273 Hs.382171 NR_149072 ENSG00000242082 SLC5A4-AS1 - SLC5A4 antisense RNA 1 ncRNA chr7-688 chr7 4176039 4176283 + 9.53 0.000 intron (NM_001079653, intron 8 of 19) AluJo|SINE|Alu -41324 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA chr11-1341 chr11 90465749 90465993 + 9.53 0.000 intron (NR_104190, intron 1 of 6) L1MC3|LINE|L1 89986 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr9-348 chr9 137381985 137382229 + 9.53 0.000 intron (NR_104598, intron 3 of 10) CpG 41055 NM_017820 54932 Hs.495553 NM_017820 ENSG00000187609 EXD3 mut-7 exonuclease 3'-5' domain containing 3 protein-coding chr13-387 chr13 52011316 52011560 + 9.53 0.000 promoter-TSS (NR_036571) promoter-TSS (NR_036571) 12 NM_000053 540 Hs.492280 NM_000053 ENSG00000123191 ATP7B PWD|WC1|WD|WND ATPase copper transporting beta protein-coding chr22-428 chr22 10722814 10723058 + 9.53 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 238593 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo chr2-1661 chr2 33043840 33044084 + 9.53 0.000 intron (NM_206943, intron 3 of 33) intron (NM_206943, intron 3 of 33) -90635 NM_001166264 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding chr19-1615 chr19 42388837 42389081 + 9.37 0.000 exon (NM_032488, exon 2 of 4) exon (NM_032488, exon 2 of 4) 1338 NM_032488 84518 Hs.148590 NM_032488 ENSG00000105427 CNFN PLAC8L2 cornifelin protein-coding chr5-1169 chr5 169149116 169149360 + 9.37 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) 114456 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA chr11-744 chr11 66509929 66510173 + 9.37 0.000 promoter-TSS (NM_024649) promoter-TSS (NM_024649) -584 NM_024649 582 Hs.502915 NM_024649 ENSG00000174483 BBS1 BBS2L2 Bardet-Biedl syndrome 1 protein-coding chr6-705 chr6 97230207 97230451 + 9.37 0.000 intron (NM_001350600, intron 12 of 23) AluSz|SINE|Alu 52887 NM_001350600 253714 Hs.444292 NM_198468 ENSG00000146263 MMS22L C6orf167|dJ39B17.2 MMS22 like, DNA repair protein protein-coding chr5-1133 chr5 139795472 139795716 + 9.37 0.000 promoter-TSS (NM_032289) promoter-TSS (NM_032289) -214 NM_032289 84249 Hs.21963 NM_032289 ENSG00000146005 PSD2 EFA6C pleckstrin and Sec7 domain containing 2 protein-coding chr19-1188 chr19 10091390 10091634 + 9.37 0.000 TTS (NM_001321411) TTS (NM_001321411) 5195 NM_001308277 55337 Hs.655613 NM_018381 ENSG00000130813 SHFL C19orf66|IRAV|RyDEN|SFL shiftless antiviral inhibitor of ribosomal frameshifting protein-coding chr11-1603 chr11 76522197 76522441 + 9.37 0.000 intron (NM_001300942, intron 12 of 21) intron (NM_001300942, intron 12 of 21) 77294 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding chr11-1529 chr11 64969605 64969849 + 9.37 0.000 intron (NM_001037225, intron 1 of 10) AluSx3|SINE|Alu 2364 NM_001300803 283129 Hs.567793 NM_001037225 ENSG00000168070 MAJIN C11orf85 membrane anchored junction protein protein-coding chr6-753 chr6 156303652 156303896 + 9.37 0.000 Intergenic MLT1C|LTR|ERVL-MaLR -74976 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA chr2-1458 chr2 41333216 41333460 + 9.37 0.000 Intergenic Intergenic -544217 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA chr11-1035 chr11 130021155 130021399 + 9.37 0.000 Intergenic AluY|SINE|Alu -18442 NM_199437 56980 Hs.275086 NM_020228 ENSG00000170325 PRDM10 PFM7|TRIS PR/SET domain 10 protein-coding chr8-666 chr8 102123781 102124025 + 9.37 0.000 intron (NM_001040624, intron 1 of 7) CpG 431 NM_001040627 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding chr17-990 chr17 47715837 47716081 + 9.37 0.000 Intergenic Intergenic -17277 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding chr9-1058 chr9 7658353 7658597 + 9.37 0.000 Intergenic Intergenic 141303 NM_001318058 90871 Hs.7517 NM_033428 ENSG00000137038 DMAC1 C9orf123|TMEM261 distal membrane arm assembly complex 1 protein-coding chr6-872 chr6 157774158 157774402 + 9.37 0.000 Intergenic (GGAGTGGA)n|Simple_repeat|Simple_repeat -48966 NM_016224 51429 Hs.191213 NM_016224 ENSG00000130340 SNX9 SDP1|SH3PX1|SH3PXD3A|WISP sorting nexin 9 protein-coding chr17-963 chr17 40091710 40091954 + 9.37 0.000 TTS (NM_021724) TTS (NM_021724) 8757 NM_021724 9572 Hs.724 NM_021724 ENSG00000126368 NR1D1 EAR1|REVERBA|REVERBalpha|THRA1|THRAL|ear-1|hRev nuclear receptor subfamily 1 group D member 1 protein-coding chr9-1142 chr9 135699482 135699726 + 9.37 0.000 promoter-TSS (NM_001101677) promoter-TSS (NM_001101677) -76 NM_001101677 402381 Hs.120464 NM_001012415 ENSG00000165643 SOHLH1 C9orf157|NOHLH|ODG5|SPATA27|SPGF32|TEB2|bA100C15.3|bHLHe80 spermatogenesis and oogenesis specific basic helix-loop-helix 1 protein-coding chr20-659 chr20 62839727 62839971 + 9.37 0.000 intron (NM_001853, intron 31 of 31) intron (NM_001853, intron 31 of 31) -4717 NM_080750 100132911 NM_080750 DPH3P1 C20orf143|DPH3B|ZCSL1 diphthamide biosynthesis 3 pseudogene 1 protein-coding chr16-1035 chr16 1788682 1788926 + 9.37 0.000 non-coding (NR_104318, exon 6 of 6) non-coding (NR_104318, exon 6 of 6) 4901 NM_001146006 3483 Hs.839 NM_004970 ENSG00000099769 IGFALS ACLSD|ALS insulin like growth factor binding protein acid labile subunit protein-coding chr19-1674 chr19 56085690 56085934 + 9.37 0.000 Intergenic MIRc|SINE|MIR 19128 NR_110741 101928886 Hs.434652 NR_110741 ENSG00000267522 LINC01864 - long intergenic non-protein coding RNA 1864 ncRNA chr6-831 chr6 99607412 99607656 + 9.37 0.000 intron (NM_021620, intron 1 of 3) intron (NM_021620, intron 1 of 3) 760 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding chr12-601 chr12 124568642 124568886 + 9.37 0.000 Intergenic Intergenic -1152 NM_001077261 9612 Hs.137510 NM_006312 ENSG00000196498 NCOR2 CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1 nuclear receptor corepressor 2 protein-coding chr1-981 chr1 1518270 1518514 + 9.37 0.000 intron (NM_001170536, intron 4 of 15) (AC)n|Simple_repeat|Simple_repeat 5862 NM_001170536 55210 Hs.23413 NM_018188 ENSG00000197785 ATAD3A HAYOS ATPase family AAA domain containing 3A protein-coding chr19-1659 chr19 51530614 51530858 + 9.37 0.000 exon (NM_001245, exon 3 of 8) exon (NM_001245, exon 3 of 8) 934 NM_198846 946 Hs.720304 NM_001245 ENSG00000105492 SIGLEC6 CD327|CD33L|CD33L1|CD33L2|CDW327|OBBP1 sialic acid binding Ig like lectin 6 protein-coding chr6-922 chr6 18264556 18264800 + 9.37 0.000 promoter-TSS (NM_001134709) promoter-TSS (NM_001134709) -148 NM_001134709 7913 Hs.484813 NM_003472 ENSG00000124795 DEK D6S231E DEK proto-oncogene protein-coding chr19-878 chr19 32234521 32234765 + 9.37 0.000 Intergenic Intergenic -110967 NM_014910 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding chr13-309 chr13 25536244 25536488 + 9.37 0.000 intron (NM_016529, intron 6 of 36) AluSx1|SINE|Alu 67592 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr19-1624 chr19 45067264 45067508 + 9.37 0.000 exon (NM_007056, exon 14 of 21) exon (NM_007056, exon 14 of 21) -8241 NM_001319055 79760 Hs.466919 NM_024707 ENSG00000142252 GEMIN7 SIP3 gem nuclear organelle associated protein 7 protein-coding chr2-1140 chr2 181277417 181277661 + 9.37 0.000 intron (NR_130784, intron 3 of 4) intron (NR_130784, intron 3 of 4) 28113 NR_039637 100616213 NR_039637 ENSG00000266705 MIR4437 mir-4437 microRNA 4437 ncRNA chr16-864 chr16 82627155 82627399 + 9.37 0.000 intron (NM_001220492, intron 1 of 5) CpG 308 NM_001220488 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding chr11-1589 chr11 73692560 73692804 + 9.37 0.000 intron (NM_001243718, intron 3 of 4) AluY|SINE|Alu 43769 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chr2-1002 chr2 173109331 173109575 + 9.37 0.000 intron (NM_133646, intron 2 of 11) intron (NM_133646, intron 2 of 11) 33607 NM_016653 51776 Hs.444451 NM_016653 ENSG00000091436 MAP3K20 AZK|CNM6|MLK7|MLT|MLTK|MLTKalpha|MLTKbeta|MRK|SFMMP|ZAK|mlklak|pk mitogen-activated protein kinase kinase kinase 20 protein-coding chr18-296 chr18 8609212 8609456 + 9.37 0.000 promoter-TSS (NM_001025300) promoter-TSS (NM_001025300) -111 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding chr17-1158 chr17 58435896 58436140 + 9.37 0.000 intron (NM_001080439, intron 5 of 5) MIRc|SINE|MIR -18436 NM_017763 54894 Hs.584916 NM_017763 ENSG00000108375 RNF43 RNF124|SSPCS|URCC ring finger protein 43 protein-coding chr17-867 chr17 48539164 48539408 + 9.37 0.000 Intergenic Intergenic -5065 NR_102279 100874362 Hs.171806 NR_102279 ENSG00000230148 HOXB-AS1 HOXB3OS HOXB cluster antisense RNA 1 ncRNA chr11-1395 chr11 2126822 2127066 + 9.37 0.000 Intergenic (TGGA)n|Simple_repeat|Simple_repeat 7265 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA chr10-366 chr10 47205176 47205420 + 9.37 0.000 Intergenic AluYm1|SINE|Alu -94899 NM_004962 2662 Hs.2171 NM_004962 ENSG00000266524 GDF10 BIP|BMP-3b|BMP3B growth differentiation factor 10 protein-coding KI270729.1-10 KI270729.1 21894 22138 + 9.37 0.000 NA NA NA NA chr9-1112 chr9 124001046 124001290 + 9.37 0.000 Intergenic Intergenic 8228 NR_135129 100505588 Hs.547168 NR_135129 ENSG00000236668 LOC100505588 - uncharacterized LOC100505588 ncRNA chr7-432 chr7 130690642 130690886 + 9.37 0.000 Intergenic AluJr|SINE|Alu -3332 NM_001304968 114960 Hs.592266 NM_052933 ENSG00000213265 TSGA13 - testis specific 13 protein-coding chr1-2638 chr1 215773526 215773770 + 9.37 0.000 intron (NM_206933, intron 55 of 71) LTR9|LTR|ERV1 206344 NM_001319295 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding chr20-613 chr20 46400402 46400646 + 9.37 0.000 intron (NM_133171, intron 1 of 21) intron (NM_133171, intron 1 of 21) 6091 NM_001318253 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding chr1-2075 chr1 156108653 156108897 + 9.37 0.000 intron (NM_001282625, intron 3 of 12) AluSx|SINE|Alu -5895 NM_005572 4000 Hs.594444 NM_005572 ENSG00000160789 LMNA CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1 lamin A/C protein-coding chr1-2021 chr1 33903107 33903351 + 9.37 0.000 intron (NM_052896, intron 5 of 69) intron (NM_052896, intron 5 of 69) 34273 NR_038372 402779 Hs.666207 NR_038372 ENSG00000231163 CSMD2-AS1 - CSMD2 antisense RNA 1 ncRNA chr11-1388 chr11 1219144 1219388 + 9.37 0.000 Intergenic Intergenic -3800 NM_002458 727897 Hs.523395 NM_002458 ENSG00000117983 MUC5B MG1|MUC-5B|MUC5|MUC9 mucin 5B, oligomeric mucus/gel-forming protein-coding chr8-689 chr8 132893267 132893511 + 9.37 0.000 intron (NM_003235, intron 10 of 47) (GT)n|Simple_repeat|Simple_repeat 26431 NM_003235 7038 Hs.654591 NM_003235 ENSG00000042832 TG AITD3|TGN thyroglobulin protein-coding chr2-1745 chr2 81224834 81225078 + 9.37 0.000 Intergenic Intergenic 241990 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA chr14-302 chr14 91945142 91945386 + 9.37 0.000 intron (NM_006329, intron 1 of 10) intron (NM_006329, intron 1 of 10) 2438 NM_006329 10516 Hs.332708 NM_006329 ENSG00000140092 FBLN5 ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50 fibulin 5 protein-coding chr1-2034 chr1 46278650 46278894 + 9.37 0.000 TTS (NM_001370766) TTS (NM_001370766) 24594 NM_006369 10489 Hs.144941 NM_006369 ENSG00000132128 LRRC41 MUF1|PP7759 leucine rich repeat containing 41 protein-coding chr22-600 chr22 50174172 50174416 + 9.37 0.000 intron (NM_052839, intron 1 of 2) intron (NM_052839, intron 1 of 2) 3563 NR_027691 56666 Hs.440092 NM_052839 ENSG00000073150 PANX2 PX2|hPANX2 pannexin 2 protein-coding chr12-1004 chr12 120430591 120430835 + 9.37 0.000 Intergenic L2a|LINE|L2 -7400 NM_004373 1337 Hs.369624 NM_004373 ENSG00000111775 COX6A1 CMTRID|COX6A|COX6AL cytochrome c oxidase subunit 6A1 protein-coding chr22-255 chr22 50063496 50063740 + 9.37 0.000 intron (NM_015166, intron 11 of 11) intron (NM_015166, intron 11 of 11) -5391 NM_001350317 164714 Hs.526713 NM_001080447 ENSG00000138892 TTLL8 - tubulin tyrosine ligase like 8 protein-coding chr21-254 chr21 43706144 43706388 + 9.37 0.000 Intergenic AluSx|SINE|Alu -12863 NM_003681 8566 Hs.284491 NM_003681 ENSG00000160209 PDXK C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79 pyridoxal kinase protein-coding chr11-1647 chr11 117890199 117890443 + 9.37 0.000 Intergenic MIR|SINE|MIR -12891 NM_001164831 53826 Hs.744850 NM_022003 ENSG00000137726 FXYD6 - FXYD domain containing ion transport regulator 6 protein-coding chr9-1133 chr9 132848884 132849128 + 9.37 0.000 intron (NM_001317959, intron 6 of 14) AluSc8|SINE|Alu -29338 NR_133631 11092 Hs.62595 NM_018956 ENSG00000165698 SPACA9 C9orf9|Mast sperm acrosome associated 9 protein-coding chr16-803 chr16 20951517 20951761 + 9.37 0.000 intron (NM_001347886, intron 56 of 61) AluJb|SINE|Alu 50377 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr4-849 chr4 146548864 146549108 + 9.37 0.000 Intergenic AluSz|SINE|Alu -27015 NM_001317817 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr15-312 chr15 94029352 94029596 + 9.37 0.000 intron (NR_120320, intron 2 of 8) intron (NR_120320, intron 2 of 8) 78464 NR_120320 101927112 Hs.134687 NR_120320 ENSG00000259724 LINC01581 - long intergenic non-protein coding RNA 1581 ncRNA chr11-635 chr11 113885017 113885261 + 9.37 0.000 Intergenic MER57B2|LTR|ERV1 -9567 NM_020886 57646 Hs.503891 NM_020886 ENSG00000048028 USP28 - ubiquitin specific peptidase 28 protein-coding chr12-718 chr12 132857104 132857348 + 9.37 0.000 intron (NM_018223, intron 9 of 17) intron (NM_018223, intron 9 of 17) -28357 NM_001172557 2802 Hs.507333 NM_005895 ENSG00000090615 GOLGA3 GCP170|MEA-2 golgin A3 protein-coding chr2-923 chr2 36922302 36922546 + 9.22 0.000 intron (NM_003162, intron 2 of 17) AluJr|SINE|Alu 44112 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr5-922 chr5 130255831 130256075 + 9.22 0.000 Intergenic AluSg7|SINE|Alu 351488 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding GL000216.2-15 GL000216.2 608 852 + 9.22 0.000 NA NA NA NA chr19-1243 chr19 39521868 39522112 + 9.22 0.000 Intergenic AluJo|SINE|Alu 6567 NR_146916 348303 Hs.319284 NM_182704 ENSG00000186838 SELENOV SELV selenoprotein V protein-coding chr19-1417 chr19 1071279 1071523 + 9.22 0.000 intron (NM_001282335, intron 1 of 21) CpG 191 NM_001282335 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding chr6-816 chr6 63454287 63454531 + 9.22 0.000 Intergenic Intergenic -117603 NM_003463 7803 Hs.227777 NM_003463 ENSG00000112245 PTP4A1 HH72|PRL-1|PRL1|PTP(CAAX1)|PTPCAAX1 protein tyrosine phosphatase 4A1 protein-coding chr15-268 chr15 84089898 84090142 + 9.22 0.000 intron (NR_036652, intron 3 of 9) AluJr|SINE|Alu 9833 NR_036652 648809 Hs.585157 NR_036652 EFL1P1 EFTUD1P1|FAM42B|HsT19321 elongation factor like GTPase 1 pseudogene 1 pseudo chr17-943 chr17 19415852 19416096 + 9.22 0.000 exon (NM_007148, exon 14 of 14) exon (NM_007148, exon 14 of 14) 4742 NM_007148 7732 Hs.189482 NM_007148 ENSG00000128482 RNF112 BFP|ZNF179 ring finger protein 112 protein-coding chr10-613 chr10 5734635 5734879 + 9.22 0.000 intron (NM_001321785, intron 12 of 20) AluJo|SINE|Alu 49919 NR_135800 54906 Hs.610717 NM_017782 ENSG00000108021 TASOR2 C10orf18|FAM208B|bA318E3.2 transcription activation suppressor family member 2 protein-coding chr1-1853 chr1 160881625 160881869 + 9.22 0.000 intron (NM_017625, intron 4 of 7) AluSx1|SINE|Alu 3433 NM_017625 55600 Hs.50813 NM_017625 ENSG00000179914 ITLN1 HL-1|HL1|INTL|ITLN|LFR|hIntL|omentin intelectin 1 protein-coding chr17-694 chr17 44682185 44682429 + 9.22 0.000 intron (NM_144609, intron 2 of 4) Charlie15a|DNA|hAT-Charlie 7469 NM_144609 124808 Hs.579115 NM_144609 ENSG00000180329 CCDC43 - coiled-coil domain containing 43 protein-coding chr19-519 chr19 41427510 41427754 + 9.22 0.000 intron (NM_198540, intron 1 of 2) intron (NM_198540, intron 1 of 2) 1098 NM_198540 374907 Hs.441681 NM_198540 ENSG00000177191 B3GNT8 B3GALT7|BGALT15|beta3Gn-T8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 protein-coding chr14-495 chr14 101020152 101020396 + 9.22 0.000 Intergenic Intergenic -1792 NR_029871 494328 NR_029871 ENSG00000199088 MIR379 MIRN379|hsa-mir-379|mir-379 microRNA 379 ncRNA ML143364.1-1 ML143364.1 94372 94616 + 9.22 0.000 NA NA NA NA chr20-314 chr20 6879770 6880014 + 9.22 0.000 Intergenic AluYb8|SINE|Alu 112206 NM_001200 650 Hs.73853 NM_001200 ENSG00000125845 BMP2 BDA2|BMP2A|SSFSC bone morphogenetic protein 2 protein-coding chr7-1376 chr7 106925936 106926180 + 9.22 0.000 Intergenic AluJo|SINE|Alu 60579 NM_002649 5294 Hs.32942 NM_002649 ENSG00000105851 PIK3CG PI3CG|PI3K|PI3Kgamma|PIK3|p110gamma|p120-PI3K phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma protein-coding chr19-1559 chr19 19120944 19121188 + 9.22 0.000 exon (NM_001256766, exon 8 of 10) exon (NM_001256766, exon 8 of 10) 17412 NM_001256766 54929 Hs.631629 NM_017814 ENSG00000064545 TMEM161A AROS-29 transmembrane protein 161A protein-coding chr8-568 chr8 70194403 70194647 + 9.22 0.000 intron (NM_001321711, intron 4 of 21) intron (NM_001321711, intron 4 of 21) -123273 NM_024504 63978 Hs.736037 NM_024504 ENSG00000147596 PRDM14 PFM11 PR/SET domain 14 protein-coding chr15-708 chr15 78944947 78945191 + 9.22 0.000 promoter-TSS (NM_004390) promoter-TSS (NM_004390) 29 NM_001319137 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr4-505 chr4 8074579 8074823 + 9.22 0.000 intron (NM_001130084, intron 6 of 19) L1MB8|LINE|L1 -2713 NM_001286688 84448 Hs.233404 NM_032432 ENSG00000163995 ABLIM2 - actin binding LIM protein family member 2 protein-coding chr16-800 chr16 12380592 12380836 + 9.22 0.000 intron (NM_032167, intron 16 of 20) (ACCC)n|Simple_repeat|Simple_repeat -339607 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA chr1-775 chr1 100623876 100624120 + 9.22 0.000 Intergenic L2c|LINE|L2 23006 NR_038914 100128787 Hs.536050 NR_038914 LINC01349 - long intergenic non-protein coding RNA 1349 ncRNA chr7-1092 chr7 43906232 43906476 + 9.22 0.000 intron (NM_001077664, intron 1 of 5) CpG 242 NM_001204871 100534592 NM_001204871 ENSG00000270617 URGCP-MRPS24 - URGCP-MRPS24 readthrough protein-coding chrX-472 chrX 64395293 64395537 + 9.22 0.000 promoter-TSS (NM_017677) promoter-TSS (NM_017677) 37 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding chr12-1278 chr12 127230867 127231111 + 9.22 0.000 Intergenic LTR8|LTR|ERV1 53294 NR_146537 105370065 NR_146537 LINC02376 - long intergenic non-protein coding RNA 2376 ncRNA chr17-1247 chr17 13905126 13905370 + 9.22 0.000 Intergenic Intergenic -119250 NR_003261 94158 Hs.633073 NR_003261 CDRT15P1 CDRT15P CMT1A duplicated region transcript 15 pseudogene 1 pseudo chr15-693 chr15 75321572 75321816 + 9.22 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -14369 NM_001321846 54939 Hs.351327 NM_017828 ENSG00000140365 COMMD4 - COMM domain containing 4 protein-coding chr2-1743 chr2 77480772 77481016 + 9.22 0.000 intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 41482 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding chr6-1122 chr6 162498245 162498489 + 9.22 0.000 intron (NM_004562, intron 1 of 11) intron (NM_004562, intron 1 of 11) -228765 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr19-1252 chr19 42132120 42132364 + 9.22 0.000 promoter-TSS (NR_038332) promoter-TSS (NR_038332) 204 NM_002698 5452 Hs.147381 NM_002698 ENSG00000028277 POU2F2 OCT2|OTF2|Oct-2 POU class 2 homeobox 2 protein-coding chr10-1111 chr10 27240634 27240878 + 9.22 0.000 promoter-TSS (NM_001301254) promoter-TSS (NM_001301254) 41 NM_145698 91452 Hs.530597 NM_145698 ENSG00000107897 ACBD5 - acyl-CoA binding domain containing 5 protein-coding chr17-243 chr17 21972999 21973243 + 9.22 0.000 Intergenic (ATGGA)n|Simple_repeat|Simple_repeat -229874 NR_144546 23666 Hs.499916 NR_144546 ENSG00000263563 UBBP4 - ubiquitin B pseudogene 4 pseudo chr10-532 chr10 97173410 97173654 + 9.22 0.000 intron (NR_037909, intron 11 of 14) AluJb|SINE|Alu 12427 NM_003061 6585 Hs.632082 NM_003061 ENSG00000187122 SLIT1 MEGF4|SLIL1|SLIT-1|SLIT3 slit guidance ligand 1 protein-coding chr12-931 chr12 6606887 6607131 + 9.22 0.000 promoter-TSS (NM_001297553) promoter-TSS (NM_001297553) 370 NM_001273 1108 Hs.162233 NM_001273 ENSG00000111642 CHD4 CHD-4|Mi-2b|Mi2-BETA|SIHIWES chromodomain helicase DNA binding protein 4 protein-coding chr6-1067 chr6 129088505 129088749 + 9.22 0.000 intron (NM_000426, intron 3 of 64) SVA_C|Retroposon|SVA 205486 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding chr9-902 chr9 82068696 82068940 + 9.22 0.000 Intergenic MER44B|DNA|TcMar-Tigger 80046 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr4-652 chr4 2059886 2060130 + 9.22 0.000 intron (NM_178557, intron 1 of 2) CpG-20881 681 NM_178557 339983 Hs.318529 NM_178557 ENSG00000185818 NAT8L CML3|NACED|NAT8-LIKE N-acetyltransferase 8 like protein-coding chr19-1451 chr19 3523156 3523400 + 9.22 0.000 intron (NM_001136198, intron 1 of 12) intron (NM_001136198, intron 1 of 12) 322 NM_001136197 51343 Hs.413133 NM_016263 ENSG00000105325 FZR1 CDC20C|CDH1|FZR|FZR2|HCDH|HCDH1 fizzy and cell division cycle 20 related 1 protein-coding chr22-346 chr22 25164806 25165050 + 9.22 0.000 intron (NM_001145206, intron 4 of 10) AluSg|SINE|Alu -34930 NM_004076 1417 Hs.533022 NM_004076 ENSG00000100053 CRYBB3 CATCN2|CRYB3|CTRCT22 crystallin beta B3 protein-coding chr2-1771 chr2 97590095 97590339 + 9.22 0.000 promoter-TSS (NM_025190) promoter-TSS (NM_025190) -252 NM_025190 57730 Hs.532921 NM_020970 ENSG00000196912 ANKRD36B KIAA1641 ankyrin repeat domain 36B protein-coding chr17-1394 chr17 73193083 73193327 + 9.22 0.000 exon (NM_018714, exon 1 of 14) exon (NM_018714, exon 1 of 14) 150 NM_018714 9382 Hs.103555 NM_018714 ENSG00000166685 COG1 CDG2G|LDLB component of oligomeric golgi complex 1 protein-coding chr2-1885 chr2 187556739 187556983 + 9.22 0.000 Intergenic SVA_D|Retroposon|SVA -2356 NM_001032281 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding chr19-1089 chr19 33620125 33620369 + 9.22 0.000 Intergenic Intergenic -1706 NM_001127895 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding chr10-1033 chr10 101990045 101990289 + 9.22 0.000 intron (NM_024541, intron 19 of 25) intron (NM_024541, intron 19 of 25) 66006 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding chr14-418 chr14 64465328 64465572 + 9.22 0.000 promoter-TSS (NM_004857) promoter-TSS (NM_004857) -49 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr11-1678 chr11 131204761 131205005 + 9.07 0.000 Intergenic Intergenic -165732 NM_001352006 50863 Hs.504352 NM_016522 ENSG00000182667 NTM CEPU-1|HNT|IGLON2|NTRI neurotrimin protein-coding chr9-1176 chr9 13279580 13279824 + 9.07 0.000 promoter-TSS (NM_001330637) promoter-TSS (NM_001330637) 11 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding chr4-960 chr4 41390005 41390249 + 9.07 0.000 intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) 29320 NM_001112717 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding chr17-1286 chr17 32283091 32283335 + 9.07 0.000 intron (NM_001363836, intron 2 of 8) intron (NM_001363836, intron 2 of 8) 17037 NM_001363835 162494 Hs.655027 NM_138328 ENSG00000141314 RHBDL3 RHBDL4|VRHO rhomboid like 3 protein-coding chr6-328 chr6 111228843 111229087 + 9.07 0.000 3' UTR (NM_018593, exon 6 of 6) 3' UTR (NM_018593, exon 6 of 6) -30374 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr2-1618 chr2 18925291 18925535 + 9.07 0.000 Intergenic Intergenic 101558 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA chr6-372 chr6 7107630 7107874 + 9.07 0.000 promoter-TSS (NM_001003698) promoter-TSS (NM_001003698) 9 NM_001168344 6239 Hs.298248 NM_002955 ENSG00000124782 RREB1 FINB|HNT|LZ321|RREB-1|Zep-1 ras responsive element binding protein 1 protein-coding chr7-1235 chr7 22854160 22854404 + 9.07 0.000 promoter-TSS (NR_146320) promoter-TSS (NR_146320) 42 NR_146320 109729180 Hs.553139 NR_146320 SNHG26 - small nucleolar RNA host gene 26 ncRNA chr4-387 chr4 178968542 178968786 + 9.07 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -1060728 NR_108092 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA chr16-929 chr16 9158599 9158843 + 9.07 0.000 Intergenic AluJb|SINE|Alu 67077 NM_014117 29035 Hs.221497 NM_014117 ENSG00000182831 C16orf72 PRO0149 chromosome 16 open reading frame 72 protein-coding chr16-789 chr16 2937304 2937548 + 9.07 0.000 intron (NM_020912, intron 7 of 8) intron (NM_020912, intron 7 of 8) 25447 NM_001308068 84256 Hs.655321 NM_020912 ENSG00000059122 FLYWCH1 - FLYWCH-type zinc finger 1 protein-coding chr11-1075 chr11 25062524 25062768 + 9.07 0.000 intron (NM_001009909, intron 10 of 11) intron (NM_001009909, intron 10 of 11) 565593 NM_001252008 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr10-929 chr10 120413247 120413491 + 9.07 0.000 Intergenic Intergenic -43585 NM_001030059 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding chr4-756 chr4 148683092 148683336 + 9.07 0.000 Intergenic Intergenic -238516 NM_001354819 4306 Hs.163924 NM_000901 ENSG00000151623 NR3C2 MCR|MLR|MR|NR3C2VIT nuclear receptor subfamily 3 group C member 2 protein-coding chr10-411 chr10 72366291 72366535 + 9.07 0.000 TTS (NM_001363513) TTS (NM_001363513) -11494 NM_001002762 54788 Hs.500013 NM_017626 ENSG00000148719 DNAJB12 DJ10 DnaJ heat shock protein family (Hsp40) member B12 protein-coding chr11-1608 chr11 80076198 80076442 + 9.07 0.000 Intergenic AluSz6|SINE|Alu -635290 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding chr13-61 chr13 25429268 25429512 + 9.07 0.000 intron (NM_016529, intron 1 of 36) AluSq2|SINE|Alu -39384 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr14-521 chr14 45756657 45756901 + 9.07 0.000 Intergenic L1P3|LINE|L1 -41177 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA chr11-1576 chr11 72451328 72451572 + 9.07 0.000 Intergenic (CTTT)n|Simple_repeat|Simple_repeat -16766 NM_001258394 81570 Hs.523877 NM_030813 ENSG00000162129 CLPB ANKCLB|HSP78|MEGCANN|MGCA7|SKD3 ClpB homolog, mitochondrial AAA ATPase chaperonin protein-coding chr21-233 chr21 36028096 36028340 + 9.07 0.000 Intergenic Intergenic 22898 NR_110419 100996609 Hs.742062 NR_110419 LINC01436 - long intergenic non-protein coding RNA 1436 ncRNA chrX-241 chrX 34404868 34405112 + 9.07 0.000 Intergenic L1PBb|LINE|L1 252295 NM_031442 83604 Hs.8769 NM_031442 ENSG00000147027 TMEM47 BCMP1|TM4SF10|VAB-9 transmembrane protein 47 protein-coding chr9-1258 chr9 95107200 95107444 + 9.07 0.000 intron (NM_001243743, intron 13 of 14) intron (NM_001243743, intron 13 of 14) -21228 NR_036109 100422842 NR_036109 ENSG00000207617 MIR3074 mir-3074 microRNA 3074 ncRNA chr3-1267 chr3 47164428 47164672 + 9.07 0.000 promoter-TSS (NM_001349370) promoter-TSS (NM_001349370) 180 NR_033373 285352 Hs.570631 NR_033373 KIF9-AS1 - KIF9 antisense RNA 1 ncRNA chr11-1548 chr11 66534330 66534574 + 9.07 0.000 TTS (NM_024649) TTS (NM_024649) 11596 NM_207340 254359 Hs.209587 NM_207340 ENSG00000174165 ZDHHC24 - zinc finger DHHC-type containing 24 protein-coding chr7-476 chr7 92870504 92870748 + 9.07 0.000 intron (NR_110087, intron 2 of 2) AluJb|SINE|Alu -33999 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding chr17-1101 chr17 3847930 3848174 + 9.07 0.000 Intergenic AluSc8|SINE|Alu -1806 NM_001114118 55421 Hs.120963 NM_018553 ENSG00000074356 NCBP3 C17orf85|ELG|HSA277841 nuclear cap binding subunit 3 protein-coding chrX-178 chrX 70859592 70859836 + 9.07 0.000 intron (NM_001003811, intron 6 of 30) intron (NM_001003811, intron 6 of 30) -13419 NR_145758 109617015 NR_145758 ENSG00000280704 SNORD3E - small nucleolar RNA, C/D box 3E snoRNA chr19-1235 chr19 36305003 36305247 + 9.07 0.000 Intergenic CpG -6218 NR_029389 100134317 Hs.466550 NR_029389 LOC100134317 - uncharacterized LOC100134317 ncRNA chr10-922 chr10 115818099 115818343 + 9.07 0.000 intron (NM_207303, intron 27 of 28) intron (NM_207303, intron 27 of 28) 376568 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr16-1215 chr16 86845464 86845708 + 9.07 0.000 Intergenic Intergenic 123495 NR_135182 102724344 Hs.585769 NR_135182 ENSG00000261175 LINC02188 - long intergenic non-protein coding RNA 2188 ncRNA chr3-1339 chr3 69287526 69287770 + 9.07 0.000 intron (NM_015123, intron 5 of 22) intron (NM_015123, intron 5 of 22) 98440 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding chr3-456 chr3 151134068 151134312 + 9.07 0.000 intron (NM_053002, intron 4 of 42) (T)n|Simple_repeat|Simple_repeat 47392 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding chr17-686 chr17 30686237 30686481 + 9.07 0.000 Intergenic AluSx1|SINE|Alu -23249 NR_144395 440423 Hs.628886 NR_024187 SUZ12P1 SUZ12P SUZ12 pseudogene 1 pseudo chr3-690 chr3 193762863 193763107 + 9.07 0.000 Intergenic L2a|LINE|L2 81024 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA chr6-620 chr6 111316134 111316378 + 9.07 0.000 intron (NM_001286431, intron 29 of 34) intron (NM_001286431, intron 29 of 34) 56917 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr12-918 chr12 130839083 130839327 + 9.07 0.000 promoter-TSS (NM_001980) promoter-TSS (NM_001980) 45 NM_001351052 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding chr12-598 chr12 121842553 121842797 + 9.07 0.000 intron (NM_002150, intron 12 of 13) AluJb|SINE|Alu 16184 NM_002150 3242 Hs.2899 NM_002150 ENSG00000158104 HPD 4-HPPD|4HPPD|GLOD3|HPPDASE|PPD 4-hydroxyphenylpyruvate dioxygenase protein-coding chr2-1566 chr2 231377281 231377525 + 9.07 0.000 TTS (NM_001271466) TTS (NM_001271466) 14695 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA chr1-2468 chr1 106982671 106982915 + 9.07 0.000 Intergenic Intergenic -73881 NM_018137 55170 Hs.26006 NM_018137 ENSG00000198890 PRMT6 HRMT1L6 protein arginine methyltransferase 6 protein-coding chr17-1307 chr17 42190033 42190277 + 8.92 0.000 intron (NM_032484, intron 9 of 9) intron (NM_032484, intron 9 of 9) 4339 NM_032484 84514 Hs.38039 NM_032484 ENSG00000167925 GHDC D11LGP1|LGP1 GH3 domain containing protein-coding chr6-1092 chr6 150927263 150927507 + 8.92 0.000 intron (NM_001350486, intron 11 of 27) intron (NM_001350486, intron 11 of 27) 60899 NM_001350491 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding KI270729.1-8 KI270729.1 20949 21193 + 8.92 0.000 NA NA NA NA chr4-964 chr4 43811537 43811781 + 8.92 0.000 Intergenic Intergenic -205202 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA chr1-2512 chr1 153616748 153616992 + 8.92 0.000 promoter-TSS (NM_020672) promoter-TSS (NM_020672) -545 NM_020672 57402 Hs.288998 NM_020672 ENSG00000189334 S100A14 BCMP84|S100A15 S100 calcium binding protein A14 protein-coding chr21-261 chr21 44817188 44817432 + 8.92 0.000 intron (NM_006936, intron 1 of 3) CpG 752 NM_006936 6612 Hs.474005 NM_006936 ENSG00000184900 SUMO3 SMT3A|SMT3H1|SUMO-3|Smt3B small ubiquitin like modifier 3 protein-coding chr13-290 chr13 72971808 72972052 + 8.92 0.000 intron (NR_146206, intron 15 of 16) intron (NR_146206, intron 15 of 16) -83046 NM_001286818 688 Hs.508234 NM_001730 ENSG00000102554 KLF5 BTEB2|CKLF|IKLF Kruppel like factor 5 protein-coding chr18-93 chr18 37342113 37342357 + 8.92 0.000 intron (NM_001353724, intron 2 of 12) (CA)n|Simple_repeat|Simple_repeat 67775 NR_134588 105372068 Hs.569903 NR_134588 ENSG00000267202 LOC105372068 - uncharacterized LOC105372068 ncRNA chr7-974 chr7 74605047 74605291 + 8.92 0.000 Intergenic MER91A|DNA|hAT-Tip100 9201 NR_162116 113218504 NR_162116 MIR10525 - microRNA 10525 ncRNA chr11-1268 chr11 20387250 20387494 + 8.92 0.000 promoter-TSS (NM_001145166) promoter-TSS (NM_001145166) -158 NM_001145166 10196 Hs.152337 NM_005788 ENSG00000185238 PRMT3 HRMT1L3 protein arginine methyltransferase 3 protein-coding chr13-525 chr13 109090610 109090854 + 8.92 0.000 intron (NM_015011, intron 27 of 34) intron (NM_015011, intron 27 of 34) 76571 NR_047700 100885782 Hs.655942 NR_047700 ENSG00000236242 MYO16-AS1 - MYO16 antisense RNA 1 ncRNA chr2-669 chr2 37017545 37017789 + 8.92 0.000 intron (NM_019024, intron 26 of 35) AluSq|SINE|Alu -51131 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr8-752 chr8 68929018 68929262 + 8.92 0.000 intron (NR_039986, intron 3 of 4) intron (NR_039986, intron 3 of 4) 175050 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA chr19-696 chr19 40191439 40191683 + 8.92 0.000 5' UTR (NM_002446, exon 1 of 10) 5' UTR (NM_002446, exon 1 of 10) 135 NM_002446 4294 Hs.466743 NM_002446 ENSG00000130758 MAP3K10 MEKK10|MLK2|MST mitogen-activated protein kinase kinase kinase 10 protein-coding chrX-258 chrX 93495752 93495996 + 8.92 0.000 Intergenic L1PA10|LINE|L1 177704 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding chr19-708 chr19 47363703 47363947 + 8.92 0.000 intron (NM_014681, intron 6 of 16) AluSz|SINE|Alu 14510 NM_014681 9704 Hs.151706 NM_014681 ENSG00000134815 DHX34 DDX34|HRH1 DExH-box helicase 34 protein-coding chr10-568 chr10 8980103 8980347 + 8.92 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 82236 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA chr16-1223 chr16 87922655 87922899 + 8.92 0.000 intron (NM_001739, intron 2 of 6) intron (NM_001739, intron 2 of 6) 13752 NM_001367225 763 Hs.177446 NM_001739 ENSG00000174990 CA5A CA5|CA5AD|CAV|CAVA|GS1-21A4.1 carbonic anhydrase 5A protein-coding chr3-1475 chr3 180679734 180679978 + 8.92 0.000 promoter-TSS (NM_181426) promoter-TSS (NM_181426) -367 NM_181426 339829 Hs.712820 NM_181426 ENSG00000284862 CCDC39 CILD14|FAP59 coiled-coil domain containing 39 protein-coding chr8-934 chr8 105853973 105854217 + 8.92 0.000 intron (NR_125796, intron 2 of 7) L1PB1|LINE|L1 206408 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA chr5-945 chr5 164842621 164842865 + 8.92 0.000 Intergenic L2a|LINE|L2 372464 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA KI270821.1-1 KI270821.1 310802 311046 + 8.92 0.000 NA NA NA NA chr3-1325 chr3 62874872 62875116 + 8.92 0.000 exon (NM_183394, exon 1 of 28) exon (NM_183394, exon 1 of 28) 422 NM_003716 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding chr5-450 chr5 19774670 19774914 + 8.92 0.000 intron (NM_001349559, intron 3 of 12) AluSx|SINE|Alu 111480 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding chr1-2274 chr1 20143365 20143609 + 8.92 0.000 exon (NM_001360869, exon 3 of 5) exon (NM_001360869, exon 3 of 5) 4164 NM_022819 64600 Hs.302034 NM_022819 ENSG00000158786 PLA2G2F GIIFsPLA2|sPLA2-IIF phospholipase A2 group IIF protein-coding chr9-933 chr9 107734578 107734822 + 8.92 0.000 Intergenic MER121|DNA|hAT? -244931 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding chr14-357 chr14 32939639 32939883 + 8.92 0.000 intron (NM_001165893, intron 1 of 10) CpG 882 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding chr17-1314 chr17 43033951 43034195 + 8.92 0.000 Intergenic Intergenic 8842 NM_005440 8153 Hs.603111 NM_005440 ENSG00000108830 RND2 ARHN|RHO7|RhoN Rho family GTPase 2 protein-coding chr2-264 chr2 25982461 25982705 + 8.92 0.000 promoter-TSS (NM_002254) promoter-TSS (NM_002254) -86 NM_002254 3797 Hs.21611 NM_002254 ENSG00000084731 KIF3C - kinesin family member 3C protein-coding chr10-1334 chr10 130492550 130492794 + 8.92 0.000 Intergenic Intergenic 356263 NM_001321980 10539 Hs.42644 NM_006541 ENSG00000108010 GLRX3 GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3 glutaredoxin 3 protein-coding chr1-2499 chr1 150471561 150471805 + 8.92 0.000 exon (NM_001297673, exon 10 of 11) exon (NM_001297673, exon 10 of 11) -15736 NM_001271895 80222 Hs.288974 NM_025150 ENSG00000143374 TARS2 COXPD21|TARSL1|thrRS threonyl-tRNA synthetase 2, mitochondrial protein-coding chr14-789 chr14 102408058 102408302 + 8.92 0.000 intron (NM_014844, intron 3 of 19) AluSc|SINE|Alu 45239 NM_001172631 9895 Hs.195667 NM_014844 ENSG00000196663 TECPR2 KIAA0329|SPG49 tectonin beta-propeller repeat containing 2 protein-coding chrX-192 chrX 17110215 17110459 + 8.92 0.000 intron (NM_001080975, intron 14 of 17) Tigger4a|DNA|TcMar-Tigger 163679 NM_001080975 9185 Hs.186810 NM_004726 ENSG00000169891 REPS2 POB1 RALBP1 associated Eps domain containing 2 protein-coding chr6-268 chr6 13781737 13781981 + 8.92 0.000 Intergenic AluJb|SINE|Alu 32701 NM_001031713 63933 Hs.214043 NM_022102 ENSG00000050393 MCUR1 C6orf79|CCDC90A|FMP32 mitochondrial calcium uniporter regulator 1 protein-coding chr4-858 chr4 181030479 181030723 + 8.92 0.000 Intergenic MER57C2|LTR|ERV1 128548 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr2-1157 chr2 219211623 219211867 + 8.92 0.000 intron (NM_005689, intron 14 of 18) AluJo|SINE|Alu 4961 NM_001270998 130617 Hs.534540 NM_138802 ENSG00000158552 ZFAND2B AIRAPL zinc finger AN1-type containing 2B protein-coding chr2-1829 chr2 139405637 139405881 + 8.92 0.000 Intergenic MSTB|LTR|ERVL-MaLR 508435 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo chr18-231 chr18 34908286 34908530 + 8.92 0.000 Intergenic Intergenic -68520 NM_001143826 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr12-487 chr12 112418800 112419044 + 8.92 0.000 promoter-TSS (NM_080601) promoter-TSS (NM_080601) 24 NM_001330437 5781 Hs.506852 NM_002834 ENSG00000179295 PTPN11 BPTP3|CFC|JMML|METCDS|NS1|PTP-1D|PTP2C|SH-PTP2|SH-PTP3|SHP2 protein tyrosine phosphatase non-receptor type 11 protein-coding chr13-188 chr13 95641953 95642197 + 8.92 0.000 5' UTR (NM_198968, exon 4 of 23) 5' UTR (NM_198968, exon 4 of 23) 2631 NM_198968 22873 Hs.656580 NM_014934 ENSG00000134874 DZIP1 DZIP|DZIPt1 DAZ interacting zinc finger protein 1 protein-coding chr3-512 chr3 12104434 12104678 + 8.92 0.000 intron (NM_133625, intron 1 of 12) L1MEd|LINE|L1 54356 NM_003256 7079 Hs.591665 NM_003256 ENSG00000157150 TIMP4 TIMP-4 TIMP metallopeptidase inhibitor 4 protein-coding chr6-981 chr6 43746132 43746376 + 8.92 0.000 Intergenic Intergenic -23955 NM_001171629 7422 Hs.73793 NM_003376 ENSG00000112715 VEGFA MVCD1|VEGF|VPF vascular endothelial growth factor A protein-coding chr4-460 chr4 60317975 60318219 + 8.92 0.000 Intergenic AluY|SINE|Alu -604522 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA chr9-776 chr9 34176203 34176447 + 8.77 0.000 Intergenic Intergenic -2680 NM_001171201 51271 Hs.268963 NM_016525 ENSG00000165006 UBAP1 NAG20|SPG80|UAP|UBAP|UBAP-1 ubiquitin associated protein 1 protein-coding chr11-1018 chr11 74741792 74742036 + 8.77 0.000 Intergenic AluY|SINE|Alu -6935 NM_001098638 254225 Hs.370145 NM_001098638 ENSG00000166439 RNF169 - ring finger protein 169 protein-coding chr1-2434 chr1 88276729 88276973 + 8.77 0.000 Intergenic Intergenic -407293 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr20-487 chr20 34194910 34195154 + 8.77 0.000 Intergenic Intergenic -65333 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding chr6-417 chr6 127002681 127002925 + 8.77 0.000 Intergenic AluSx|SINE|Alu -115868 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr12-1192 chr12 101479653 101479897 + 8.77 0.000 intron (NM_152323, intron 4 of 5) intron (NM_152323, intron 4 of 5) 4439 NM_152323 121599 Hs.577097 NM_152323 ENSG00000166211 SPIC SPI-C Spi-C transcription factor protein-coding chr17-1430 chr17 78797963 78798207 + 8.77 0.000 intron (NM_001321291, intron 20 of 20) intron (NM_001321291, intron 20 of 20) -15743 NM_004762 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding chr2-1835 chr2 144409645 144409889 + 8.77 0.000 intron (NM_001171653, intron 3 of 8) AluJb|SINE|Alu -76698 NM_001354360 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding chr2-1399 chr2 232906017 232906261 + 8.77 0.000 intron (NM_001114090, intron 3 of 12) SVA_D|Retroposon|SVA 22012 NM_001114090 25791 Hs.97316 NM_019850 ENSG00000066248 NGEF ARHGEF27|EPHEXIN neuronal guanine nucleotide exchange factor protein-coding chr12-997 chr12 112723792 112724036 + 8.77 0.000 intron (NM_001347952, intron 1 of 21) Tigger2b_Pri|DNA|TcMar-Tigger -28738 NR_031631 100302227 NR_031631 ENSG00000283507 MIR1302-1 MIRN1302-1|hsa-mir-1302-1 microRNA 1302-1 ncRNA chr2-1877 chr2 181086997 181087241 + 8.77 0.000 Intergenic AluSc8|SINE|Alu -36718 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA chr20-627 chr20 51443812 51444056 + 8.77 0.000 intron (NM_012340, intron 6 of 10) (A)n|Simple_repeat|Simple_repeat 9043 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA chr10-578 chr10 68447892 68448136 + 8.77 0.000 intron (NM_001080449, intron 6 of 20) intron (NM_001080449, intron 6 of 20) 23959 NM_001080449 1763 Hs.532446 NM_001080449 ENSG00000138346 DNA2 DNA2L|hDNA2 DNA replication helicase/nuclease 2 protein-coding chr7-658 chr7 127588450 127588694 + 8.77 0.000 intron (NM_001662, intron 1 of 5) CpG 161 NM_001662 381 Hs.653202 NM_001662 ENSG00000004059 ARF5 - ADP ribosylation factor 5 protein-coding chr2-699 chr2 170693600 170693844 + 8.77 0.000 Intergenic AluSx1|SINE|Alu 20845 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA chr8-736 chr8 30506192 30506436 + 8.77 0.000 intron (NM_001008710, intron 5 of 8) intron (NM_001008710, intron 5 of 8) -120913 NR_046205 100128750 Hs.126813 NR_046205 ENSG00000254109 RBPMS-AS1 - RBPMS antisense RNA 1 ncRNA chr6-1119 chr6 159407984 159408228 + 8.77 0.000 Intergenic SVA_B|Retroposon|SVA 24575 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA chr2-1482 chr2 73924565 73924809 + 8.77 0.000 Intergenic AluY|SINE|Alu -2139 NR_134895 1716 Hs.469022 NM_001929 ENSG00000114956 DGUOK MTDPS3|NCPH|PEOB4|dGK deoxyguanosine kinase protein-coding chr7-651 chr7 102671646 102671890 + 8.77 0.000 promoter-TSS (NM_032959) promoter-TSS (NM_032959) -33 NM_032959 246721 Hs.610255 NM_032958 ENSG00000267645 POLR2J2 HRPB11B|POLR2J3|RPB11b1|RPB11b2 RNA polymerase II subunit J2 protein-coding chr4-831 chr4 117301118 117301362 + 8.77 0.000 Intergenic Intergenic 59399 NR_147151 105377389 Hs.129401 NR_147151 ENSG00000224932 LINC02262 - long intergenic non-protein coding RNA 2262 ncRNA chr2-1363 chr2 203074274 203074518 + 8.77 0.000 intron (NM_001114132, intron 7 of 54) AluSx1|SINE|Alu 59517 NM_001114132 65065 Hs.648846 NM_198945 ENSG00000144426 NBEAL1 A530083I02Rik|ALS2CR16|ALS2CR17 neurobeachin like 1 protein-coding chr5-526 chr5 29429271 29429515 + 8.77 0.000 Intergenic L1ME3B|LINE|L1 -33417 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA chr7-1306 chr7 66191910 66192154 + 8.77 0.000 Intergenic AluSx|SINE|Alu -13302 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding chr17-839 chr17 3742350 3742594 + 8.77 0.000 intron (NM_002208, intron 19 of 30) AluSx|SINE|Alu 18569 NM_031965 83903 Hs.534059 NM_031965 ENSG00000177602 HASPIN GSG2 histone H3 associated protein kinase protein-coding chr20-578 chr20 33182632 33182876 + 8.77 0.000 Intergenic MIRb|SINE|MIR -10851 NR_026760 317716 Hs.434194 NM_173859 ENSG00000183566 BPIFA4P BASE BPI fold containing family A member 4, pseudogene pseudo chr10-862 chr10 77039639 77039883 + 8.77 0.000 intron (NM_001271519, intron 14 of 28) intron (NM_001271519, intron 14 of 28) -101070 NR_120654 101929310 Hs.666457 NR_120654 ENSG00000225497 KCNMA1-AS2 - KCNMA1 antisense RNA 2 ncRNA chr19-1298 chr19 55346981 55347225 + 8.77 0.000 exon (NM_032701, exon 9 of 9) exon (NM_032701, exon 9 of 9) 7227 NM_032701 84787 Hs.590982 NM_032701 ENSG00000133247 KMT5C SUV420H2|Suv4-20h2 lysine methyltransferase 5C protein-coding chr2-1656 chr2 30368780 30369024 + 8.77 0.000 Intergenic Intergenic 22256 NR_122048 285043 Hs.429119 NR_122048 LINC01936 - long intergenic non-protein coding RNA 1936 ncRNA chr7-313 chr7 5114004 5114248 + 8.77 0.000 Intergenic AluSq2|SINE|Alu 30420 NR_034163 645700 Hs.690815 NR_034163 ENSG00000159904 ZNF890P - zinc finger protein 890, pseudogene pseudo chr11-1024 chr11 100620362 100620606 + 8.77 0.000 Intergenic AluY|SINE|Alu -66804 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding chr3-841 chr3 53863624 53863868 + 8.77 0.000 intron (NM_018725, intron 10 of 10) intron (NM_018725, intron 10 of 10) 17178 NM_018725 55540 Hs.654970 NM_018725 ENSG00000056736 IL17RB CRL4|EVI27|IL17BR|IL17RH1 interleukin 17 receptor B protein-coding chr10-1096 chr10 15019883 15020127 + 8.77 0.000 intron (NR_144471, intron 4 of 7) intron (NR_144471, intron 4 of 7) 15420 NR_144469 105376432 Hs.723069 NR_144469 DCLRE1CP1 - DNA cross-link repair 1C pseudogene 1 pseudo KQ759759.1-1 KQ759759.1 83273 83517 + 8.77 0.000 NA NA NA NA chr6-500 chr6 26520835 26521079 + 8.77 0.000 promoter-TSS (NR_026790) promoter-TSS (NR_026790) -749 NR_026790 493812 Hs.272939 NR_026790 ENSG00000228223 HCG11 CTA-14H9.3|bK14H9.3 HLA complex group 11 ncRNA chr2-1705 chr2 55573856 55574100 + 8.77 0.000 intron (NM_001122964, intron 11 of 16) AluJb|SINE|Alu 43644 NM_020463 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding chr3-748 chr3 96380655 96380899 + 8.77 0.000 Intergenic Intergenic 20813 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA chrX-529 chrX 119065476 119065720 + 8.77 0.000 Intergenic Intergenic 84981 NM_020721 57481 Hs.97594 NM_020721 ENSG00000250423 KIAA1210 - KIAA1210 protein-coding chr22-470 chr22 20268280 20268524 + 8.77 0.000 promoter-TSS (NM_023004) promoter-TSS (NM_023004) -84 NM_023004 65078 Hs.30868 NM_023004 ENSG00000040608 RTN4R NGR|NOGOR reticulon 4 receptor protein-coding chr17-1150 chr17 50123989 50124233 + 8.77 0.000 intron (NM_174920, intron 2 of 10) intron (NM_174920, intron 2 of 10) 6049 NM_174920 201191 Hs.567769 NM_174920 ENSG00000167100 SAMD14 - sterile alpha motif domain containing 14 protein-coding chr3-1133 chr3 71760728 71760972 + 8.77 0.000 Intergenic AluSq2|SINE|Alu -6077 NM_173359 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding chr15-316 chr15 17082886 17083130 + 8.77 0.000 Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -3199736 NR_038836 646096 Hs.448789 NR_038836 ENSG00000259156 CHEK2P2 - checkpoint kinase 2 pseudogene 2 pseudo chr17-689 chr17 39798378 39798622 + 8.77 0.000 intron (NM_001257409, intron 2 of 5) intron (NM_001257409, intron 2 of 5) -20275 NM_001284516 22806 Hs.371680 NM_012481 ENSG00000161405 IKZF3 AIO|AIOLOS|ZNFN1A3 IKAROS family zinc finger 3 protein-coding chr12-1060 chr12 19440135 19440379 + 8.77 0.000 promoter-TSS (NM_001267043) promoter-TSS (NM_001267043) -342 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding chr5-1155 chr5 151966724 151966968 + 8.77 0.000 intron (NR_109876, intron 1 of 2) MER4B|LTR|ERV1 7948 NR_109876 101927115 Hs.549665 NR_109876 ENSG00000254226 LINC01933 CTB-12O2.1 long intergenic non-protein coding RNA 1933 ncRNA chr14-700 chr14 51651624 51651868 + 8.77 0.000 promoter-TSS (NM_152330) promoter-TSS (NM_152330) -2 NR_037676 145438 Hs.645410 NR_037676 ENSG00000273888 FRMD6-AS1 C14orf82 FRMD6 antisense RNA 1 ncRNA chr19-1548 chr19 18349534 18349778 + 8.77 0.000 intron (NR_138029, intron 3 of 5) L1MC5a|LINE|L1 9058 NM_001329471 54858 Hs.131776 NM_017712 ENSG00000130517 PGPEP1 PAP-I|PGI|PGP|PGP-I|PGPI|Pcp pyroglutamyl-peptidase I protein-coding chr2-469 chr2 202199734 202199978 + 8.77 0.000 intron (NM_001277372, intron 22 of 23) intron (NM_001277372, intron 22 of 23) 38741 NM_003352 7341 Hs.81424 NM_003352 ENSG00000116030 SUMO1 DAP1|GMP1|OFC10|PIC1|SENP2|SMT3|SMT3C|SMT3H3|UBL1 small ubiquitin like modifier 1 protein-coding chr9-908 chr9 88388472 88388716 + 8.77 0.000 intron (NM_006717, intron 1 of 5) CpG 150 NM_006717 10927 Hs.146804 NM_006717 ENSG00000106723 SPIN1 SPIN|TDRD24 spindlin 1 protein-coding chr6-440 chr6 1861484 1861728 + 8.77 0.000 intron (NM_001253846, intron 7 of 10) intron (NM_001253846, intron 7 of 10) 251691 NM_001453 2296 Hs.348883 NM_001453 ENSG00000054598 FOXC1 ARA|ASGD3|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3 forkhead box C1 protein-coding chr1-2031 chr1 44021176 44021420 + 8.77 0.000 intron (NM_001328629, intron 2 of 13) intron (NM_001328629, intron 2 of 13) -3958 NM_001328628 6536 Hs.442590 NM_006934 ENSG00000196517 SLC6A9 GCENSG|GLYT1 solute carrier family 6 member 9 protein-coding chr12-954 chr12 48724618 48724862 + 8.77 0.000 Intergenic SVA_D|Retroposon|SVA -2695 NM_001351125 255411 Hs.404103 NM_001351123 ENSG00000257987 TEX49 LINC00935 testis expressed 49 protein-coding chr9-1361 chr9 130649047 130649291 + 8.77 0.000 Intergenic AluSx1|SINE|Alu -15425 NM_021619 59335 Hs.495311 NM_021619 ENSG00000130711 PRDM12 HSAN8|PFM9 PR/SET domain 12 protein-coding chr2-1011 chr2 187948206 187948450 + 8.77 0.000 Intergenic MER66B|LTR|ERV1 339363 NR_126396 104355152 NR_126396 ENSG00000231689 LINC01090 - long intergenic non-protein coding RNA 1090 ncRNA chr6-992 chr6 48068743 48068987 + 8.77 0.000 promoter-TSS (NM_001013732) promoter-TSS (NM_001013732) -176 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding chr2-1754 chr2 85857003 85857247 + 8.62 0.000 intron (NM_001354224, intron 3 of 7) AluJb|SINE|Alu -2950 NM_001354247 8869 Hs.415117 NM_003896 ENSG00000115525 ST3GAL5 SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV ST3 beta-galactoside alpha-2,3-sialyltransferase 5 protein-coding chr14-422 chr14 68898830 68899074 + 8.62 0.000 intron (NM_001102, intron 8 of 20) (CCCACAC)n|Simple_repeat|Simple_repeat 80350 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr5-946 chr5 167897679 167897923 + 8.62 0.000 intron (NM_001368145, intron 2 of 26) (TAGA)n|Simple_repeat|Simple_repeat 142872 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding chr11-646 chr11 133738731 133738975 + 8.62 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat 71523 NR_120444 646522 Hs.560000 NR_120444 ENSG00000255258 LINC02743 - long intergenic non-protein coding RNA 2743 ncRNA GL000216.2-8 GL000216.2 9276 9520 + 8.62 0.000 NA NA NA NA chr9-1205 chr9 39000963 39001207 + 8.62 0.000 Intergenic AluY|SINE|Alu 287218 NM_033655 79937 Hs.128474 NM_033655 ENSG00000106714 CNTNAP3 CASPR3|CNTNAP3A contactin associated protein like 3 protein-coding chr3-828 chr3 35545347 35545591 + 8.62 0.000 Intergenic MER61-int|LTR|ERV1 -94056 NM_001267616 10777 Hs.475902 NM_016300 ENSG00000172995 ARPP21 ARPP-21|R3HDM3|RCS|TARPP cAMP regulated phosphoprotein 21 protein-coding chr10-1115 chr10 28722019 28722263 + 8.62 0.000 Intergenic CpG -21509 NR_120652 101929218 Hs.224866 NR_120652 LINC01517 - long intergenic non-protein coding RNA 1517 ncRNA chr4-630 chr4 175330182 175330426 + 8.62 0.000 Intergenic AluSx3|SINE|Alu 411946 NM_001278126 11086 Hs.126838 NM_014269 ENSG00000168594 ADAM29 CT73|svph1 ADAM metallopeptidase domain 29 protein-coding chr2-1322 chr2 156368759 156369003 + 8.62 0.000 Intergenic SVA_F|Retroposon|SVA -26761 NR_147695 440918 Hs.641142 NR_147695 FLJ46875 - uncharacterized LOC440918 ncRNA chr12-462 chr12 12883218 12883462 + 8.62 0.000 Intergenic AluY|SINE|Alu -7682 NM_003979 9052 Hs.631733 NM_003979 ENSG00000013588 GPRC5A GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 G protein-coupled receptor class C group 5 member A protein-coding chr11-1628 chr11 101255010 101255254 + 8.62 0.000 Intergenic Intergenic -125319 NM_000926 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding chr11-679 chr11 102410404 102410648 + 8.62 0.000 intron (NM_052932, intron 2 of 4) intron (NM_052932, intron 2 of 4) 42239 NM_052932 114908 Hs.503709 NM_052932 ENSG00000152558 TMEM123 KCT3|PORIMIN|PORMIN transmembrane protein 123 protein-coding KI270736.1-6 KI270736.1 49000 49244 + 8.62 0.000 NA NA NA NA chr3-1420 chr3 137971173 137971417 + 8.62 0.000 Intergenic Intergenic -27521 NM_001002026 51208 Hs.655324 NM_016369 ENSG00000066405 CLDN18 SFTA5|SFTPJ claudin 18 protein-coding chr6-188 chr6 170087475 170087719 + 8.62 0.000 Intergenic CpG -73045 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA chr1-2613 chr1 203090963 203091207 + 8.62 0.000 Intergenic Intergenic -5073 NM_002479 4656 Hs.2830 NM_002479 ENSG00000122180 MYOG MYF4|bHLHc3|myf-4 myogenin protein-coding chr4-1117 chr4 184473393 184473637 + 8.62 0.000 intron (NM_002199, intron 1 of 8) CpG 1035 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding chr10-1024 chr10 86101482 86101726 + 8.62 0.000 intron (NM_017551, intron 4 of 15) L1ME1|LINE|L1 163184 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA chr13-297 chr13 104893947 104894191 + 8.62 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -571798 NM_001161814 267012 Hs.381382 NM_172370 ENSG00000182346 DAOA LG72|SG72 D-amino acid oxidase activator protein-coding chr21-249 chr21 42513779 42514023 + 8.62 0.000 promoter-TSS (NM_001320537) promoter-TSS (NM_001320537) 49 NM_001320537 54020 Hs.547009 NM_018964 ENSG00000160190 SLC37A1 G3PP solute carrier family 37 member 1 protein-coding chr11-1328 chr11 69747026 69747270 + 8.62 0.000 Intergenic Intergenic 28193 NM_002007 2249 Hs.1755 NM_002007 ENSG00000075388 FGF4 FGF-4|HBGF-4|HST|HST-1|HSTF-1|HSTF1|K-FGF|KFGF fibroblast growth factor 4 protein-coding chr1-2423 chr1 84454445 84454689 + 8.62 0.000 Intergenic Intergenic -24699 NM_025065 80135 Hs.481202 NM_025065 ENSG00000117133 RPF1 BXDC5 ribosome production factor 1 homolog protein-coding chr1-2387 chr1 53364781 53365025 + 8.62 0.000 Intergenic L1MC3|LINE|L1 36670 NR_131923 105378732 Hs.118609 NR_131923 ENSG00000225675 LINC01771 - long intergenic non-protein coding RNA 1771 ncRNA chr9-896 chr9 77761986 77762230 + 8.62 0.000 intron (NM_002072, intron 5 of 6) SVA_D|Retroposon|SVA -113786 NM_004297 9630 Hs.657795 NM_004297 ENSG00000156049 GNA14 - G protein subunit alpha 14 protein-coding chr12-327 chr12 49223082 49223326 + 8.62 0.000 Intergenic AluJo|SINE|Alu -4722 NM_001303114 84790 Hs.652390 NM_032704 ENSG00000167553 TUBA1C TUBA6|bcm948 tubulin alpha 1c protein-coding chr21-70 chr21 46097925 46098169 + 8.62 0.000 promoter-TSS (NM_058175) promoter-TSS (NM_058175) -65 NM_058174 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding chr9-815 chr9 129482688 129482932 + 8.62 0.000 Intergenic CpG -5850 NR_038955 100506190 Hs.529860 NR_038955 LINC00963 MetaLnc9 long intergenic non-protein coding RNA 963 ncRNA chr7-1296 chr7 47941236 47941480 + 8.62 0.000 intron (NM_138295, intron 2 of 56) intron (NM_138295, intron 2 of 56) 7133 NM_138295 168507 Hs.195979 NM_138295 ENSG00000158683 PKD1L1 HTX8|PRO19563 polycystin 1 like 1, transient receptor potential channel interacting protein-coding chr16-1176 chr16 75423191 75423435 + 8.62 0.000 intron (NM_006324, intron 1 of 6) AluJr|SINE|Alu 10190 NM_006324 10428 Hs.461361 NM_006324 ENSG00000153774 CFDP1 BCNT|BUCENTAUR|CENP-29|CP27|SWC5|Yeti|p97 craniofacial development protein 1 protein-coding chr4-746 chr4 128577269 128577513 + 8.62 0.000 Intergenic MER30|DNA|hAT-Charlie 149375 NR_125882 100507487 Hs.549644 NR_125882 ENSG00000251432 LINC02615 - long intergenic non-protein coding RNA 2615 ncRNA chr8-525 chr8 123436019 123436263 + 8.62 0.000 intron (NM_001283027, intron 4 of 6) AluSx|SINE|Alu 19367 NM_018024 55093 Hs.18029 NM_018024 ENSG00000156795 WDYHV1 C8orf32 WDYHV motif containing 1 protein-coding chr15-724 chr15 82647631 82647875 + 8.62 0.000 promoter-TSS (NM_001288819) promoter-TSS (NM_001288819) -17 NR_046096 283692 Hs.578667 NR_046096 ENSG00000259462 CPEB1-AS1 - CPEB1 antisense RNA 1 ncRNA chr17-840 chr17 4382084 4382328 + 8.62 0.000 Intergenic MIRb|SINE|MIR -15532 NM_003342 7326 Hs.741319 NM_003342 ENSG00000132388 UBE2G1 E217K|UBC7|UBE2G ubiquitin conjugating enzyme E2 G1 protein-coding chr16-1042 chr16 2379712 2379956 + 8.62 0.000 intron (NR_003574, intron 7 of 16) MER21C|LTR|ERVL 38912 NR_003574 650655 Hs.376281 NR_003574 ENSG00000238098 ABCA17P ABCA17 ATP binding cassette subfamily A member 17, pseudogene pseudo chr1-1722 chr1 33570046 33570290 + 8.62 0.000 intron (NM_052896, intron 52 of 69) AluSz|SINE|Alu 97523 NM_145238 7579 Hs.442705 NM_145238 ENSG00000121903 ZSCAN20 KOX29|ZFP-31|ZNF31|ZNF360 zinc finger and SCAN domain containing 20 protein-coding chr10-551 chr10 115093037 115093281 + 8.62 0.000 promoter-TSS (NR_074088) promoter-TSS (NR_074088) -206 NR_074088 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding chr7-1275 chr7 44352244 44352488 + 8.62 0.000 Intergenic AluSz6|SINE|Alu -26735 NM_172079 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding chr13-390 chr13 55076606 55076850 + 8.62 0.000 Intergenic AluSx1|SINE|Alu -97726 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA chr12-1172 chr12 85618542 85618786 + 8.47 0.000 Intergenic Intergenic 217745 NM_005447 9182 Hs.527881 NM_005447 ENSG00000198774 RASSF9 P-CIP1|PAMCI|PCIP1 Ras association domain family member 9 protein-coding chr5-1007 chr5 33627233 33627477 + 8.47 0.000 intron (NM_030955, intron 13 of 23) (TGG)n|Simple_repeat|Simple_repeat 186579 NM_001258438 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding chr14-681 chr14 26017043 26017287 + 8.47 0.000 Intergenic Intergenic 536265 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding chr1-1259 chr1 4671266 4671510 + 8.47 0.000 intron (NM_018836, intron 1 of 5) intron (NM_018836, intron 1 of 5) 16779 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding chr7-552 chr7 8152579 8152823 + 8.47 0.000 intron (NM_001350838, intron 6 of 11) (CAC)n|Simple_repeat|Simple_repeat 109351 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding KI270736.1-7 KI270736.1 63279 63523 + 8.47 0.000 NA NA NA NA chr1-1042 chr1 73495186 73495430 + 8.47 0.000 Intergenic Intergenic -179371 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA chr9-502 chr9 15857747 15857991 + 8.47 0.000 intron (NM_001355547, intron 22 of 24) L1MB1|LINE|L1 293891 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding chr6-177 chr6 117674747 117674991 + 8.47 0.000 promoter-TSS (NM_138459) promoter-TSS (NM_138459) 415 NR_110854 101927919 Hs.467500 NR_110854 LOC101927919 - uncharacterized LOC101927919 ncRNA chr13-536 chr13 112980523 112980767 + 8.47 0.000 intron (NM_001320816, intron 1 of 29) (CCTTCC)n|Simple_repeat|Simple_repeat 1279 NM_001320816 23263 Hs.170422 NM_024979 ENSG00000126217 MCF2L ARHGEF14|DBS|OST MCF.2 cell line derived transforming sequence like protein-coding chr3-1099 chr3 15040049 15040293 + 8.47 0.000 intron (NM_003298, intron 14 of 14) AluSg4|SINE|Alu 25144 NR_135246 64432 Hs.657764 NM_022497 ENSG00000131368 MRPS25 MRP-S25|RPMS25 mitochondrial ribosomal protein S25 protein-coding chr3-1226 chr3 14947699 14947943 + 8.47 0.000 promoter-TSS (NR_046252) promoter-TSS (NR_046252) 72 NR_046255 100505641 Hs.517821 NR_046251 ENSG00000225733 FGD5-AS1 - FGD5 antisense RNA 1 ncRNA chr1-2058 chr1 109249799 109250043 + 8.47 0.000 5' UTR (NM_001408, exon 1 of 34) 5' UTR (NM_001408, exon 1 of 34) 382 NM_001408 1952 Hs.57652 NM_001408 ENSG00000143126 CELSR2 ADGRC2|CDHF10|EGFL2|Flamingo1|MEGF3 cadherin EGF LAG seven-pass G-type receptor 2 protein-coding chr17-920 chr17 2884850 2885094 + 8.47 0.000 intron (NM_001330058, intron 2 of 24) L2a|LINE|L2 80923 NR_110818 101927911 Hs.626373 NR_110818 ENSG00000262884 LOC101927911 - uncharacterized LOC101927911 ncRNA chr19-1331 chr19 4670201 4670445 + 8.47 0.000 promoter-TSS (NM_019107) promoter-TSS (NM_019107) 80 NM_019107 56005 Hs.465645 NM_019107 ENSG00000074842 MYDGF C19orf10|EUROIMAGE1875335|IL25|IL27|IL27w|R33729_1|SF20 myeloid derived growth factor protein-coding chr7-923 chr7 23489625 23489869 + 8.47 0.000 promoter-TSS (NR_026676) promoter-TSS (NR_026676) -641 NR_026676 256355 Hs.367935 NR_026676 ENSG00000232818 RPS2P32 RPS2_14_794 ribosomal protein S2 pseudogene 32 pseudo chr3-1474 chr3 179813581 179813825 + 8.47 0.000 intron (NR_146167, intron 9 of 13) AluYb8|SINE|Alu -84491 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA chr17-983 chr17 44374905 44375149 + 8.47 0.000 exon (NM_000419, exon 27 of 30) exon (NM_000419, exon 27 of 30) -11174 NM_198475 284069 Hs.154001 NM_198475 ENSG00000161682 FAM171A2 - family with sequence similarity 171 member A2 protein-coding chr7-544 chr7 1618991 1619235 + 8.47 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 4643 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo chr6-308 chr6 42117850 42118094 + 8.47 0.000 intron (NM_001164446, intron 2 of 4) MIR3|SINE|MIR 24648 NM_001164446 647024 Hs.444277 NM_001164446 ENSG00000188112 C6orf132 bA7K24.2 chromosome 6 open reading frame 132 protein-coding chr15-599 chr15 85024426 85024670 + 8.47 0.000 intron (NM_173454, intron 1 of 20) intron (NM_173454, intron 1 of 20) 42574 NM_173454 5151 Hs.9333 NM_002605 ENSG00000073417 PDE8A HsT19550 phosphodiesterase 8A protein-coding chr4-1080 chr4 146521076 146521320 + 8.47 0.000 intron (NM_032128, intron 1 of 4) intron (NM_032128, intron 1 of 4) 742 NM_001317816 84068 Hs.659209 NM_032128 ENSG00000120519 SLC10A7 C4orf13|P7|SSASKS solute carrier family 10 member 7 protein-coding chr6-572 chr6 163414068 163414312 + 8.47 0.000 promoter-TSS (NM_001301085) promoter-TSS (NM_001301085) -240 NR_037593 100526820 Hs.644159 NR_037593 ENSG00000270419 CAHM LINC00468 colon adenocarcinoma hypermethylated ncRNA chr5-1168 chr5 168976146 168976390 + 8.47 0.000 intron (NM_003062, intron 4 of 35) intron (NM_003062, intron 4 of 35) -36959 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA chr9-1208 chr9 62802261 62802505 + 8.47 0.000 intron (NR_121647, intron 1 of 4) CpG 918 NR_121647 103352539 Hs.351215 NR_121647 ENSG00000238113 LINC01410 - long intergenic non-protein coding RNA 1410 ncRNA chr11-1254 chr11 2632013 2632257 + 8.47 0.000 non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 67863 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA chr9-991 chr9 131268978 131269222 + 8.47 0.000 intron (NM_033387, intron 1 of 1) AluSx|SINE|Alu 7410 NM_033387 286336 Hs.143878 NM_033387 ENSG00000126882 FAM78A C9orf59 family with sequence similarity 78 member A protein-coding chr2-1584 chr2 240509903 240510147 + 8.47 0.000 intron (NR_148696, intron 9 of 14) intron (NR_148696, intron 9 of 14) 47963 NM_016552 51281 Hs.656615 NM_016552 ENSG00000144504 ANKMY1 ZMYND13 ankyrin repeat and MYND domain containing 1 protein-coding chr3-970 chr3 52632560 52632804 + 8.47 0.000 intron (NM_001366074, intron 14 of 30) L1MB3|LINE|L1 52917 NM_001350077 55193 Hs.189920 NM_018165 ENSG00000163939 PBRM1 BAF180|PB1 polybromo 1 protein-coding chr1-2675 chr1 235140372 235140616 + 8.47 0.000 intron (NR_144492, intron 4 of 8) LTR12C|LTR|ERV1 -11657 NM_014765 9804 Hs.533192 NM_014765 ENSG00000173726 TOMM20 MAS20|MOM19|TOM20 translocase of outer mitochondrial membrane 20 protein-coding chr12-301 chr12 66170048 66170292 + 8.47 0.000 promoter-TSS (NM_001282606) promoter-TSS (NM_001282606) -98 NM_001282609 51643 Hs.505934 NM_016056 ENSG00000155957 TMBIM4 CGI-119|GAAP|LFG4|S1R|ZPRO transmembrane BAX inhibitor motif containing 4 protein-coding chr11-834 chr11 128917932 128918176 + 8.47 0.000 3' UTR (NM_001354169, exon 4 of 4) 3' UTR (NM_001354169, exon 4 of 4) -11823 NR_045767 219833 Hs.689860 NM_145013 ENSG00000174370 C11orf45 - chromosome 11 open reading frame 45 protein-coding chr10-1257 chr10 101619631 101619875 + 8.47 0.000 intron (NR_136613, intron 5 of 7) intron (NR_136613, intron 5 of 7) -18256 NR_036115 100423033 NR_036115 ENSG00000283558 MIR3158-2 mir-3158-2 microRNA 3158-2 ncRNA chr1-1593 chr1 229024640 229024884 + 8.47 0.000 Intergenic Intergenic 150039 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr4-859 chr4 181244766 181245010 + 8.47 0.000 Intergenic Intergenic 20141 NR_149139 101928679 Hs.149643 NR_149139 LINC02500 - long intergenic non-protein coding RNA 2500 ncRNA chr2-1124 chr2 143346108 143346352 + 8.47 0.000 intron (NM_018460, intron 6 of 13) (CA)n|Simple_repeat|Simple_repeat 216811 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding chrX-364 chrX 23737656 23737900 + 8.47 0.000 intron (NM_001037171, intron 1 of 15) intron (NM_001037171, intron 1 of 15) 5498 NM_001330259 23597 Hs.298885 NM_001033583 ENSG00000123130 ACOT9 ACATE2|CGI-16|MT-ACT48|MTACT48 acyl-CoA thioesterase 9 protein-coding chr14-755 chr14 77790881 77791125 + 8.47 0.000 Intergenic LTR33|LTR|ERVL -9106 NR_158988 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding chr8-297 chr8 39928601 39928845 + 8.47 0.000 TTS (NM_002164) TTS (NM_002164) -6232 NM_194294 169355 Hs.676257 NM_194294 ENSG00000188676 IDO2 INDOL1 indoleamine 2,3-dioxygenase 2 protein-coding chr15-470 chr15 44584235 44584479 + 8.47 0.000 exon (NM_001160227, exon 30 of 38) exon (NM_001160227, exon 30 of 38) 47210 NM_003758 8669 Hs.404056 NM_003758 ENSG00000104131 EIF3J EIF3S1|eIF3-alpha|eIF3-p35 eukaryotic translation initiation factor 3 subunit J protein-coding chr6-476 chr6 168691471 168691715 + 8.47 0.000 Intergenic L1PA8|LINE|L1 250409 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding chr3-1129 chr3 59653005 59653249 + 8.47 0.000 intron (NR_149028, intron 1 of 3) intron (NR_149028, intron 1 of 3) 5370 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA chr2-1713 chr2 61820956 61821200 + 8.47 0.000 Intergenic AluSx4|SINE|Alu 32982 NM_032180 84140 Hs.440466 NM_032180 ENSG00000170264 FAM161A RP28 FAM161 centrosomal protein A protein-coding chrY-15 chrY 10999802 11000046 + 8.47 0.000 Intergenic Intergenic 1089126 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr8-846 chr8 33484612 33484856 + 8.47 0.000 promoter-TSS (NM_032509) promoter-TSS (NM_032509) -448 NM_032509 84549 Hs.583805 NM_032509 ENSG00000198042 MAK16 MAK16L|RBM13 MAK16 homolog protein-coding chr14-732 chr14 67461672 67461916 + 8.47 0.000 Intergenic Intergenic -19864 NR_049879 100847064 NR_049879 ENSG00000265993 MIR5694 - microRNA 5694 ncRNA chr10-1237 chr10 96831874 96832118 + 8.47 0.000 promoter-TSS (NM_032440) promoter-TSS (NM_032440) -302 NM_001170765 84458 Hs.427927 NM_015652 ENSG00000196233 LCOR C10orf12|MLR2 ligand dependent nuclear receptor corepressor protein-coding chr11-1642 chr11 116041987 116042231 + 8.47 0.000 Intergenic Intergenic -281909 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA chr14-792 chr14 102777361 102777605 + 8.47 0.000 promoter-TSS (NM_003300) promoter-TSS (NM_003300) 4 NM_145725 7187 Hs.510528 NM_003300 ENSG00000131323 TRAF3 CAP-1|CAP1|CD40bp|CRAF1|IIAE5|LAP1|RNF118 TNF receptor associated factor 3 protein-coding chr20-629 chr20 51875120 51875364 + 8.32 0.000 Intergenic Intergenic -12329 NR_110016 101927678 Hs.683840 NR_110016 ENSG00000227964 LINC01429 - long intergenic non-protein coding RNA 1429 ncRNA chr2-1463 chr2 44016759 44017003 + 8.32 0.000 Intergenic Intergenic -20892 NM_133259 10128 Hs.368084 NM_133259 ENSG00000138095 LRPPRC CLONE-23970|GP130|LRP130|LSFC leucine rich pentatricopeptide repeat containing protein-coding chr14-196 chr14 68905856 68906100 + 8.32 0.000 intron (NM_001102, intron 6 of 20) AluSz|SINE|Alu 73324 NM_001102 87 Hs.235750 NM_001102 ENSG00000072110 ACTN1 BDPLT15 actinin alpha 1 protein-coding chr19-1667 chr19 54021009 54021253 + 8.32 0.000 Intergenic AluSp|SINE|Alu 28843 NM_145814 59285 Hs.631560 NM_031897 ENSG00000130433 CACNG6 - calcium voltage-gated channel auxiliary subunit gamma 6 protein-coding KI270730.1-4 KI270730.1 84885 85129 + 8.32 0.000 NA NA NA NA chrX-155 chrX 46395898 46396142 + 8.32 0.000 Intergenic SVA_D|Retroposon|SVA -51169 NM_001129899 55634 Hs.632800 NM_017776 ENSG00000147121 KRBOX4 ZNF673 KRAB box domain containing 4 protein-coding chr2-675 chr2 69328022 69328266 + 8.32 0.000 intron (NM_002056, intron 17 of 18) intron (NM_002056, intron 17 of 18) 59083 NM_002056 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding chr12-575 chr12 55707978 55708222 + 8.32 0.000 promoter-TSS (NM_002206) promoter-TSS (NM_002206) -196 NM_001144996 3679 Hs.524484 NM_002206 ENSG00000135424 ITGA7 - integrin subunit alpha 7 protein-coding chr21-195 chr21 8996037 8996281 + 8.32 0.000 Intergenic Intergenic 8542 NR_162105 113218501 NR_162105 MIR10396A - microRNA 10396a ncRNA chr20-580 chr20 33502945 33503189 + 8.32 0.000 intron (NM_001032999, intron 1 of 10) AluY|SINE|Alu 12971 NM_001032999 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding chr1-852 chr1 90198253 90198497 + 8.32 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 203265 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding chr6-532 chr6 73601418 73601662 + 8.32 0.000 intron (NM_012434, intron 9 of 10) SVA_D|Retroposon|SVA 52452 NM_012434 26503 Hs.597422 NM_012434 ENSG00000119899 SLC17A5 AST|ISSD|NSD|SD|SIALIN|SIASD|SLD solute carrier family 17 member 5 protein-coding chrX-135 chrX 30934888 30935132 + 8.32 0.000 Intergenic Intergenic -45756 NM_152787 257397 Hs.188256 NM_152787 ENSG00000157625 TAB3 MAP3K7IP3|NAP1 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 protein-coding chr22-493 chr22 37420042 37420286 + 8.32 0.000 intron (NM_052906, intron 1 of 2) CpG 7306 NR_110512 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding chr22-585 chr22 39650646 39650890 + 8.32 0.000 intron (NM_001003406, intron 9 of 35) intron (NM_001003406, intron 9 of 35) 80015 NM_021096 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr4-571 chr4 318279 318523 + 8.32 0.000 Intergenic AluSc|SINE|Alu -12927 NM_001137608 654254 Hs.698668 NM_001137608 ENSG00000186777 ZNF732 - zinc finger protein 732 protein-coding chr10-1039 chr10 103565811 103566055 + 8.32 0.000 intron (NM_004210, intron 1 of 5) AluJb|SINE|Alu -48491 NR_120675 102724341 Hs.599425 NR_120675 ENSG00000235470 NEURL1-AS1 - NEURL1 antisense RNA 1 ncRNA chr17-1100 chr17 2514209 2514453 + 8.32 0.000 Intergenic L1MC|LINE|L1 -2443 NM_024086 79066 Hs.632237 NM_024086 ENSG00000127804 METTL16 METT10D methyltransferase like 16 protein-coding chr11-1074 chr11 20198668 20198912 + 8.32 0.000 Intergenic Intergenic -38315 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding chr20-604 chr20 44159735 44159979 + 8.32 0.000 exon (NM_020433, exon 2 of 6) exon (NM_020433, exon 2 of 6) 27331 NM_175913 57158 Hs.441737 NM_020433 ENSG00000149596 JPH2 CMH17|JP-2|JP2 junctophilin 2 protein-coding chr7-1342 chr7 96522426 96522670 + 8.32 0.000 intron (NR_163953, intron 2 of 5) intron (NR_163953, intron 2 of 5) -19025 NM_001201451 7979 Hs.489201 NM_006304 ENSG00000127922 SEM1 C7orf76|DSS1|ECD|SHFD1|SHFM1|SHSF1|Shfdg1 SEM1 26S proteasome complex subunit protein-coding chr1-374 chr1 2222008 2222252 + 8.32 0.000 Intergenic AluSp|SINE|Alu -6189 NM_003036 6497 Hs.656507 NM_003036 ENSG00000157933 SKI SGS|SKV SKI proto-oncogene protein-coding chr4-1094 chr4 157656715 157656959 + 8.32 0.000 Intergenic Intergenic 84347 NR_026992 340017 Hs.428275 NR_026992 ENSG00000234111 LINC02433 - long intergenic non-protein coding RNA 2433 ncRNA chr9-556 chr9 134003219 134003463 + 8.32 0.000 Intergenic (CCAT)n|Simple_repeat|Simple_repeat -11017 NM_001134398 7410 Hs.369921 NM_003371 ENSG00000160293 VAV2 VAV-2 vav guanine nucleotide exchange factor 2 protein-coding chr2-909 chr2 27482932 27483176 + 8.32 0.000 intron (NM_015662, intron 7 of 47) AluJb|SINE|Alu 6689 NM_015662 26160 Hs.127401 NM_015662 ENSG00000138002 IFT172 BBS20|NPHP17|RP71|SLB|SRTD10|osm-1|wim intraflagellar transport 172 protein-coding chr4-372 chr4 75598477 75598721 + 8.32 0.000 intron (NM_003948, intron 7 of 11) Charlie1a|DNA|hAT-Charlie 31929 NM_001330724 8999 Hs.591698 NM_003948 ENSG00000138769 CDKL2 KKIAMRE|P56 cyclin dependent kinase like 2 protein-coding chr6-909 chr6 12324007 12324251 + 8.32 0.000 Intergenic Intergenic 33768 NM_001168319 1906 Hs.511899 NM_001955 ENSG00000078401 EDN1 ARCND3|ET1|HDLCQ7|PPET1|QME endothelin 1 protein-coding chr4-1068 chr4 138904626 138904870 + 8.32 0.000 intron (NR_133945, intron 2 of 2) intron (NR_133945, intron 2 of 2) 107898 NR_133945 105377448 Hs.200280 NR_133945 ENSG00000250195 LOC105377448 - uncharacterized LOC105377448 ncRNA chr19-1618 chr19 43353269 43353513 + 8.32 0.000 promoter-TSS (NM_020406) promoter-TSS (NM_020406) -295 NM_020406 57126 Hs.232165 NM_020406 ENSG00000204936 CD177 HNA-2a|HNA2A|NB1|NB1 GP|PRV-1|PRV1 CD177 molecule protein-coding chr19-220 chr19 58607426 58607626 + 8.32 0.000 Intergenic (GGGTTA)n|Simple_repeat|Simple_repeat 32127 NR_026052 65996 Hs.541177 NM_023939 ENSG00000213753 CENPBD1P1 - CENPB DNA-binding domains containing 1 pseudogene 1 pseudo chr20-438 chr20 46709717 46709961 + 8.32 0.000 intron (NM_030777, intron 1 of 4) CpG 190 NM_030777 81031 Hs.305971 NM_030777 ENSG00000197496 SLC2A10 ATORS|ATS|GLUT10 solute carrier family 2 member 10 protein-coding chr22-607 chr22 17641591 17641835 + 8.32 0.000 intron (NM_001270730, intron 1 of 4) L1MB8|LINE|L1 2956 NM_015367 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr7-1164 chr7 154834179 154834423 + 8.32 0.000 intron (NR_157196, intron 16 of 25) AluSq2|SINE|Alu -94216 NR_024477 100132707 Hs.586358 NR_024476 ENSG00000214106 PAXIP1-AS2 PAXIP1OS PAXIP1 antisense RNA 2 ncRNA chr1-2375 chr1 46498940 46499184 + 8.32 0.000 intron (NM_172225, intron 2 of 5) AluSx1|SINE|Alu -7937 NM_147192 127343 Hs.375623 NM_147192 ENSG00000197587 DMBX1 MBX|OTX3|PAXB diencephalon/mesencephalon homeobox 1 protein-coding chr1-1569 chr1 178984458 178984702 + 8.32 0.000 Intergenic L1MA4|LINE|L1 -41224 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding chr14-526 chr14 50859898 50860142 + 8.32 0.000 Intergenic Alu|SINE|Alu -12033 NM_001206673 145447 Hs.271896 NM_181533 ENSG00000131969 ABHD12B BEM46L3|C14orf29|c14_5314 abhydrolase domain containing 12B protein-coding chr8-160 chr8 63388966 63389210 + 8.32 0.000 Intergenic AluY|SINE|Alu -76761 NR_125825 102724612 Hs.97639 NR_125825 ENSG00000253894 LOC102724612 - uncharacterized LOC102724612 ncRNA chr14-430 chr14 78228060 78228304 + 8.32 0.000 intron (NR_073547, intron 1 of 20) AluSx1|SINE|Alu 57809 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr9-1291 chr9 113346894 113347138 + 8.32 0.000 Intergenic AluSz|SINE|Alu -2525 NM_017688 54836 Hs.614517 NM_017688 ENSG00000119411 BSPRY - B-box and SPRY domain containing protein-coding chr15-449 chr15 34514985 34515229 + 8.32 0.000 Intergenic CpG 13264 NR_036050 100302160 NR_036050 ENSG00000221649 MIR1233-1 MIR1233|MIRN1233|hsa-mir-1233|hsa-mir-1233-1 microRNA 1233-1 ncRNA chr4-936 chr4 28514774 28515018 + 8.16 0.000 Intergenic SVA_D|Retroposon|SVA -304686 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA chr1-1550 chr1 151132833 151133077 + 8.16 0.000 exon (NM_001178062, exon 19 of 19) exon (NM_001178062, exon 19 of 19) 13676 NM_001178061 10500 Hs.516316 NM_030913 ENSG00000143434 SEMA6C SEMAY|m-SemaY|m-SemaY2 semaphorin 6C protein-coding chr11-1493 chr11 57943846 57944090 + 8.16 0.000 Intergenic SVA_B|Retroposon|SVA -79913 NM_001005212 219956 Hs.689841 NM_001005212 ENSG00000186509 OR9Q1 - olfactory receptor family 9 subfamily Q member 1 protein-coding chr22-432 chr22 21690932 21691176 + 8.16 0.000 intron (NM_148175, intron 15 of 20) AluSq2|SINE|Alu 25042 NM_014337 23759 Hs.438587 NM_014337 ENSG00000100023 PPIL2 CYC4|CYP60|Cyp-60|UBOX7|hCyP-60 peptidylprolyl isomerase like 2 protein-coding chr5-658 chr5 36322081 36322325 + 8.16 0.000 Intergenic L1MA2|LINE|L1 -20301 NM_145000 202151 Hs.199777 NM_145000 ENSG00000164188 RANBP3L - RAN binding protein 3 like protein-coding chr2-905 chr2 26405495 26405739 + 8.16 0.000 intron (NM_145038, intron 1 of 16) L1MC5|LINE|L1 3697 NM_145038 92749 Hs.393714 NM_145038 ENSG00000157856 DRC1 C2orf39|CCDC164|CILD21 dynein regulatory complex subunit 1 protein-coding chr15-411 chr15 28859218 28859462 + 8.16 0.000 Intergenic AluY|SINE|Alu -10655 NM_001365371 728310 Hs.589351 NM_001365371 ENSG00000261649 GOLGA6L7 GOLGA6L7P golgin A6 family like 7 protein-coding chr16-856 chr16 73392380 73392624 + 8.16 0.000 intron (NR_038234, intron 1 of 2) HAL1|LINE|L1 5697 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA chr9-862 chr9 21208423 21208667 + 8.16 0.000 Intergenic Intergenic -1402 NM_002171 3446 Hs.282275 NM_002171 ENSG00000186803 IFNA10 IFN-alphaC interferon alpha 10 protein-coding chr10-651 chr10 78373975 78374219 + 8.16 0.000 Intergenic AluJr|SINE|Alu 106755 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA chr5-595 chr5 103393200 103393444 + 8.16 0.000 Intergenic Intergenic 133898 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding chr13-202 chr13 26827984 26828228 + 8.16 0.000 Intergenic L1MB5|LINE|L1 -67320 NM_005288 2835 Hs.123034 NM_005288 ENSG00000132975 GPR12 GPCR12|GPCR21|PPP1R84 G protein-coupled receptor 12 protein-coding chr3-1090 chr3 7980527 7980771 + 8.16 0.000 intron (NR_110131, intron 2 of 3) intron (NR_110131, intron 2 of 3) 35658 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA chr8-722 chr8 6547783 6548027 + 8.16 0.000 intron (NM_001147, intron 1 of 8) intron (NM_001147, intron 1 of 8) 15340 NM_001118887 285 Hs.583870 NM_001147 ENSG00000091879 ANGPT2 AGPT2|ANG2 angiopoietin 2 protein-coding chr12-812 chr12 22123004 22123248 + 8.16 0.000 Intergenic AluSx|SINE|Alu 76908 NM_018686 55907 Hs.311346 NM_018686 ENSG00000111726 CMAS CSS cytidine monophosphate N-acetylneuraminic acid synthetase protein-coding chr15-482 chr15 59760065 59760309 + 8.16 0.000 Intergenic AluJo|SINE|Alu -70867 NM_001368060 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding chr6-986 chr6 44128590 44128834 + 8.16 0.000 intron (NM_018426, intron 1 of 23) intron (NM_018426, intron 1 of 23) 1158 NM_018426 55362 Hs.414473 NM_018426 ENSG00000137216 TMEM63B C6orf110 transmembrane protein 63B protein-coding chr7-1155 chr7 139035125 139035369 + 8.16 0.000 intron (NM_080660, intron 1 of 4) intron (NM_080660, intron 1 of 4) 795 NM_080660 92092 Hs.512833 NM_080660 ENSG00000146858 ZC3HAV1L C7orf39 zinc finger CCCH-type containing, antiviral 1 like protein-coding chr9-1081 chr9 90367135 90367379 + 8.16 0.000 intron (NR_109795, intron 2 of 2) AluSx|SINE|Alu 66232 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA chr9-1215 chr9 71444082 71444326 + 8.16 0.000 intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 2767 NM_001366142 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr4-969 chr4 48456907 48457151 + 8.16 0.000 Intergenic AluSx|SINE|Alu -26314 NM_152679 201780 Hs.132591 NM_152679 ENSG00000145248 SLC10A4 P4 solute carrier family 10 member 4 protein-coding chr3-659 chr3 53282092 53282336 + 8.16 0.000 Intergenic AluSp|SINE|Alu -26100 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr9-822 chr9 133583971 133584215 + 8.16 0.000 Intergenic Intergenic -3847 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding chr10-829 chr10 45594856 45595100 + 8.16 0.000 promoter-TSS (NM_145021) promoter-TSS (NM_145021) -72 NM_145021 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding chr5-549 chr5 143750035 143750279 + 8.16 0.000 Intergenic Intergenic -62004 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding chr14-617 chr14 48137292 48137536 + 8.16 0.000 Intergenic L1MEd|LINE|L1 -342400 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chrX-365 chrX 23763921 23764165 + 8.16 0.000 Intergenic AluSz|SINE|Alu -19115 NM_002970 6303 Hs.28491 NM_002970 ENSG00000130066 SAT1 DC21|KFSD|KFSDX|SAT|SSAT|SSAT-1 spermidine/spermine N1-acetyltransferase 1 protein-coding chr1-2310 chr1 27549202 27549446 + 8.16 0.000 exon (NM_001029882, exon 6 of 7) exon (NM_001029882, exon 6 of 7) 54170 NM_001029882 27245 Hs.469280 NM_001029882 ENSG00000126705 AHDC1 MRD25 AT-hook DNA binding motif containing 1 protein-coding chr17-1162 chr17 62704241 62704485 + 8.16 0.000 TTS (NM_001288780) TTS (NM_001288780) -1843 NR_147886 105371855 Hs.446268 NR_147886 ENSG00000265702 LOC105371855 - uncharacterized LOC105371855 ncRNA chr11-987 chr11 40984734 40984978 + 8.16 0.000 intron (NM_001258419, intron 1 of 6) intron (NM_001258419, intron 1 of 6) 474780 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr1-1804 chr1 100332448 100332692 + 8.16 0.000 Intergenic Intergenic -12445 NM_001319211 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding chr4-852 chr4 152151660 152151904 + 8.16 0.000 Intergenic AluSq2|SINE|Alu 50964 NR_121627 100996286 Hs.322462 NR_121627 ENSG00000245954 LINC02273 - long intergenic non-protein coding RNA 2273 ncRNA chr19-1189 chr19 10447056 10447300 + 8.16 0.000 intron (NM_001111309, intron 2 of 14) AluY|SINE|Alu -5754 NM_006202 5141 Hs.89901 NM_006202 ENSG00000065989 PDE4A DPDE2|PDE4|PDE46 phosphodiesterase 4A protein-coding chr5-958 chr5 177252403 177252647 + 8.16 0.000 intron (NM_172349, intron 13 of 23) intron (NM_172349, intron 13 of 23) 51194 NM_001031677 53917 Hs.16258 NM_130781 ENSG00000169228 RAB24 - RAB24, member RAS oncogene family protein-coding chr19-1672 chr19 55624378 55624622 + 8.16 0.000 promoter-TSS (NM_203374) promoter-TSS (NM_203374) 75 NM_203374 147808 Hs.53996 NM_203374 ENSG00000179922 ZNF784 - zinc finger protein 784 protein-coding chr19-1348 chr19 13281258 13281502 + 8.16 0.000 intron (NM_023035, intron 22 of 46) AluJr|SINE|Alu 130969 NM_004907 9592 Hs.501629 NM_004907 ENSG00000160888 IER2 ETR101 immediate early response 2 protein-coding chr1-428 chr1 228182306 228182550 + 8.16 0.000 TTS (NM_001010867) TTS (NM_001010867) 7858 NM_001310327 200205 Hs.237017 NM_001010867 ENSG00000181873 IBA57 C1orf69|MMDS3|SPG74 iron-sulfur cluster assembly factor IBA57 protein-coding chr15-421 chr15 43518439 43518683 + 8.16 0.000 intron (NM_002373, intron 1 of 5) (GCTGGA)n|Simple_repeat|Simple_repeat 953 NM_002373 4130 Hs.194301 NM_002373 ENSG00000166963 MAP1A MAP1L|MTAP1A microtubule associated protein 1A protein-coding chr4-1031 chr4 95082855 95083099 + 8.16 0.000 intron (NM_001256793, intron 1 of 10) AluY|SINE|Alu -8514 NM_001256794 658 Hs.598475 NM_001203 ENSG00000138696 BMPR1B ALK-6|ALK6|AMDD|BDA1D|BDA2|CDw293 bone morphogenetic protein receptor type 1B protein-coding chr9-1295 chr9 114478459 114478703 + 8.16 0.000 exon (NM_001173425, exon 2 of 12) exon (NM_001173425, exon 2 of 12) 24634 NM_001083885 25861 Hs.93836 NM_015404 ENSG00000095397 WHRN CIP98|DFNB31|PDZD7B|USH2D|WI whirlin protein-coding chr13-266 chr13 110644909 110645153 + 8.16 0.000 intron (NR_147942, intron 13 of 16) intron (NR_147942, intron 13 of 16) 29447 NM_018210 55739 Hs.408324 NM_018210 ENSG00000213995 NAXD CARKD|LP3298|PEBEL2 NAD(P)HX dehydratase protein-coding chr17-774 chr17 42039969 42040213 + 8.16 0.000 exon (NM_001358661, exon 3 of 3) exon (NM_001358661, exon 3 of 3) -2065 NM_001242704 201181 Hs.443140 NM_001013624 ENSG00000187595 ZNF385C - zinc finger protein 385C protein-coding chr5-843 chr5 172975213 172975457 + 8.16 0.000 Intergenic Intergenic -8436 NM_003945 8992 Hs.484188 NM_003945 ENSG00000113732 ATP6V0E1 ATP6H|ATP6V0E|M9.2|Vma21|Vma21p ATPase H+ transporting V0 subunit e1 protein-coding chr4-319 chr4 49634179 49634423 + 8.16 0.000 Intergenic (GAATG)n|Satellite|Satellite 647659 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chrX-465 chrX 53183272 53183516 + 8.16 0.000 intron (NR_148673, intron 25 of 26) AluJo|SINE|Alu 12094 NR_106955 102465539 NR_106955 ENSG00000276575 MIR6895 hsa-mir-6895 microRNA 6895 ncRNA chrX-536 chrX 126692131 126692375 + 8.16 0.000 Intergenic AluSz|SINE|Alu -127476 NM_001122716 100130613 Hs.130370 NM_001122716 ENSG00000183631 PRR32 CXorf64 proline rich 32 protein-coding chr6-1121 chr6 162384537 162384781 + 8.16 0.000 intron (NM_004562, intron 2 of 11) Tigger1|DNA|TcMar-Tigger -342473 NM_001080378 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding chr2-863 chr2 161238628 161238872 + 8.16 0.000 intron (NR_110593, intron 3 of 3) CpG -5989 NR_110163 100996579 Hs.660929 NR_110163 ENSG00000227403 LINC01806 - long intergenic non-protein coding RNA 1806 ncRNA chr12-994 chr12 107749396 107749640 + 8.16 0.000 intron (NM_012406, intron 5 of 11) FLAM_C|SINE|Alu 11619 NM_012406 11108 Hs.506655 NM_012406 ENSG00000110851 PRDM4 PFM1 PR/SET domain 4 protein-coding chr16-1171 chr16 71625570 71625814 + 8.16 0.000 promoter-TSS (NM_001271329) promoter-TSS (NM_001271329) -492 NM_001271329 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr19-1146 chr19 1796901 1797145 + 8.16 0.000 intron (NM_001178002, intron 14 of 28) intron (NM_001178002, intron 14 of 28) 15253 NM_138813 148229 Hs.306212 NM_138813 ENSG00000130270 ATP8B3 ATPIK ATPase phospholipid transporting 8B3 protein-coding chr12-755 chr12 62793620 62793864 + 8.16 0.000 intron (NM_020700, intron 3 of 9) AluSp|SINE|Alu 141408 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding chr4-533 chr4 88593066 88593310 + 8.16 0.000 intron (NM_001271602, intron 1 of 24) CpG 708 NM_014606 8916 Hs.35804 NM_014606 ENSG00000138641 HERC3 - HECT and RLD domain containing E3 ubiquitin protein ligase 3 protein-coding chr19-1443 chr19 2322626 2322870 + 8.01 0.000 intron (NM_016199, intron 3 of 3) AluJb|SINE|Alu 5838 NM_016199 51690 Hs.512610 NM_016199 ENSG00000130332 LSM7 YNL147W LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated protein-coding chrX-356 chrX 6926760 6927004 + 8.01 0.000 Intergenic Intergenic -220408 NM_001320750 412 Hs.522578 NM_000351 ENSG00000101846 STS ARSC|ARSC1|ASC|ES|SSDD|XLI steroid sulfatase protein-coding chr4-835 chr4 123649032 123649276 + 8.01 0.000 promoter-TSS (NR_027105) promoter-TSS (NR_027105) -837 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA chr2-413 chr2 176238610 176238854 + 8.01 0.000 Intergenic AluSx1|SINE|Alu -30710 NM_006554 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding chr8-673 chr8 111824056 111824300 + 8.01 0.000 Intergenic Intergenic 447539 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chrX-402 chrX 139997011 139997255 + 8.01 0.000 Intergenic AluSx3|SINE|Alu -20135 NR_148935 728660 Hs.460956 NR_148935 ENSG00000233145 LOC728660 - uncharacterized LOC728660 ncRNA chr3-1183 chr3 184415467 184415711 + 8.01 0.000 intron (NR_161198, intron 1 of 2) AluSx1|SINE|Alu 14052 NR_161199 105374250 Hs.129464 NR_161198 LINC02054 - long intergenic non-protein coding RNA 2054 ncRNA chr4-697 chr4 56148721 56148965 + 8.01 0.000 Intergenic AluSq|SINE|Alu -21352 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding chr2-1679 chr2 42761763 42762007 + 8.01 0.000 TTS (NM_148962) TTS (NM_148962) 2376 NM_148962 165140 Hs.168439 NM_148962 ENSG00000162881 OXER1 GPCR|GPR170|TG1019 oxoeicosanoid receptor 1 protein-coding chr10-970 chr10 6299962 6300206 + 8.01 0.000 Intergenic Intergenic -26460 NR_040079 399715 NR_040079 ENSG00000215244 LINC02649 - long intergenic non-protein coding RNA 2649 ncRNA chr5-240 chr5 138698207 138698451 + 8.01 0.000 Intergenic AluSc8|SINE|Alu 54980 NR_134245 105379194 Hs.445981 NR_134244 ENSG00000253404 LOC105379194 - uncharacterized LOC105379194 ncRNA chr7-1334 chr7 87628333 87628577 + 8.01 0.000 promoter-TSS (NM_001134405) promoter-TSS (NM_001134405) 57 NM_001134406 154661 Hs.411488 NM_138290 ENSG00000105784 RUNDC3B RPIB9|RPIP9 RUN domain containing 3B protein-coding chrX-558 chrX 137460782 137461026 + 8.01 0.000 Intergenic AluJr|SINE|Alu -105223 NM_003413 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr16-1202 chr16 85504186 85504430 + 8.01 0.000 Intergenic Intergenic -107101 NM_001134473 23199 Hs.461647 NM_014615 ENSG00000131149 GSE1 CRHSP24|KIAA0182 Gse1 coiled-coil protein protein-coding chr11-1019 chr11 75224850 75225094 + 8.01 0.000 Intergenic L2|LINE|L2 -15802 NM_001195528 100507050 Hs.577323 NM_001195528 ENSG00000261594 TPBGL - trophoblast glycoprotein like protein-coding chr17-601 chr17 24150824 24151068 + 8.01 0.000 Intergenic ALR/Alpha|Satellite|centr 1627835 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding chr7-698 chr7 10974514 10974758 + 8.01 0.000 intron (NR_033436, intron 1 of 16) intron (NR_033436, intron 1 of 16) 764 NR_033436 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding chr15-600 chr15 87587359 87587603 + 8.01 0.000 Intergenic Intergenic 10552 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA chr6-299 chr6 164266 164510 + 8.01 0.000 Intergenic Intergenic -16229 NR_109817 441123 NR_109817 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA chr12-845 chr12 57194293 57194537 + 8.01 0.000 promoter-TSS (NR_031597) promoter-TSS (NR_031597) -89 NR_031597 100302201 NR_031597 ENSG00000221365 MIR1228 MIRN1228|hsa-mir-1228|mir-1228 microRNA 1228 ncRNA chr12-1164 chr12 76102963 76103207 + 8.01 0.000 Intergenic AluSx1|SINE|Alu -18400 NM_139207 4673 Hs.524599 NM_004537 ENSG00000187109 NAP1L1 NAP1|NAP1L|NRP nucleosome assembly protein 1 like 1 protein-coding chr11-1363 chr11 123720888 123721132 + 8.01 0.000 Intergenic AluSx3|SINE|Alu 9975 NM_001301819 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding chr1-965 chr1 203499855 203500099 + 8.01 0.000 intron (NM_014359, intron 5 of 7) intron (NM_014359, intron 5 of 7) 5824 NM_014359 26254 Hs.632468 NM_014359 ENSG00000188770 OPTC OPT opticin protein-coding chr7-1419 chr7 132250837 132251081 + 8.01 0.000 intron (NM_020911, intron 4 of 31) intron (NM_020911, intron 4 of 31) -9902 NR_134565 101928807 Hs.552131 NR_134565 LOC101928807 - uncharacterized LOC101928807 ncRNA chr20-353 chr20 62861844 62862088 + 8.01 0.000 promoter-TSS (NM_006602) promoter-TSS (NM_006602) -144 NM_001301726 10732 Hs.126248 NM_006602 ENSG00000101190 TCFL5 CHA|E2BP-1|Figlb|SOSF1|bHLHe82 transcription factor like 5 protein-coding chr15-726 chr15 83191785 83192029 + 8.01 0.000 intron (NM_016073, intron 1 of 5) intron (NM_016073, intron 1 of 5) 15916 NM_016073 50810 Hs.513954 NM_016073 ENSG00000166503 HDGFL3 CGI-142|HDGF-2|HDGF2|HDGFRP3|HRP-3 HDGF like 3 protein-coding chr8-883 chr8 65341185 65341429 + 8.01 0.000 Intergenic AluSc8|SINE|Alu -160967 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA chr6-415 chr6 125455882 125456126 + 8.01 0.000 Intergenic AluY|SINE|Alu -154037 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding chr5-898 chr5 79633248 79633492 + 8.01 0.000 intron (NM_001349553, intron 6 of 16) intron (NM_001349553, intron 6 of 16) 20929 NM_001114393 167153 Hs.418198 NM_173797 ENSG00000164329 TENT2 APD4|GLD2|PAPD4|TUT2 terminal nucleotidyltransferase 2 protein-coding chr20-358 chr20 61316 61560 + 8.01 0.000 Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -26234 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr7-1231 chr7 19669392 19669636 + 8.01 0.000 Intergenic L1ME1|LINE|L1 35922 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA chr3-1193 chr3 192053292 192053536 + 8.01 0.000 Intergenic AluY|SINE|Alu -185216 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA chr12-686 chr12 107873871 107874115 + 8.01 0.000 Intergenic Intergenic 29778 NR_037629 728739 Hs.741995 NR_037629 LOC728739 - programmed cell death 2 pseudogene pseudo chr7-867 chr7 148983218 148983462 + 8.01 0.000 promoter-TSS (NR_004392) promoter-TSS (NR_004392) -415 NR_004392 6085 NR_004392 ENSG00000202354 RNY3 HY3|Y3 RNA, Ro60-associated Y3 ncRNA chr1-1329 chr1 46241790 46242034 + 8.01 0.000 Intergenic SVA_F|Retroposon|SVA -5776 NM_001370766 8438 Hs.642042 NM_003579 ENSG00000085999 RAD54L HR54|RAD54A|hHR54|hRAD54 RAD54 like protein-coding chr10-974 chr10 13001263 13001507 + 8.01 0.000 exon (NM_031455, exon 1 of 3) exon (NM_031455, exon 1 of 3) 328 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding chr15-723 chr15 82108561 82108805 + 8.01 0.000 Intergenic Intergenic 20089 NR_120367 101929690 Hs.176109 NR_120367 ENSG00000259518 LINC01583 - long intergenic non-protein coding RNA 1583 ncRNA chrX-388 chrX 106999418 106999662 + 8.01 0.000 intron (NM_001085354, intron 2 of 16) CpG 672 NM_024657 79710 Hs.496544 NM_024657 ENSG00000133131 MORC4 ZCW4|ZCWCC2|dJ75H8.2 MORC family CW-type zinc finger 4 protein-coding chr8-895 chr8 74321172 74321416 + 8.01 0.000 promoter-TSS (NM_001363050) promoter-TSS (NM_001363050) 67 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding chr1-1860 chr1 165356649 165356893 + 8.01 0.000 promoter-TSS (NM_001174069) promoter-TSS (NM_001174069) -56 NM_177398 4009 Hs.667312 NM_177398 ENSG00000162761 LMX1A LMX1|LMX1.1 LIM homeobox transcription factor 1 alpha protein-coding chr11-1525 chr11 64712994 64713238 + 8.01 0.000 exon (NM_138732, exon 2 of 20) exon (NM_138732, exon 2 of 20) 10072 NM_015080 9379 Hs.372938 NM_015080 ENSG00000110076 NRXN2 - neurexin 2 protein-coding chrX-557 chrX 137065979 137066223 + 8.01 0.000 Intergenic L2|LINE|L2 -34427 NM_054021 83550 Hs.350569 NM_054021 ENSG00000165370 GPR101 GPCR6|PAGH2|PITA2 G protein-coupled receptor 101 protein-coding chr3-1208 chr3 6213479 6213723 + 8.01 0.000 Intergenic L1MC1|LINE|L1 591848 NR_110123 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA chr15-581 chr15 74863374 74863618 + 8.01 0.000 intron (NM_001320778, intron 1 of 9) AluJb|SINE|Alu 9869 NM_005697 10066 Hs.458917 NM_005697 ENSG00000140497 SCAMP2 - secretory carrier membrane protein 2 protein-coding chr3-1419 chr3 137654281 137654525 + 8.01 0.000 Intergenic L1PA7|LINE|L1 -109912 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding chr5-932 chr5 140831417 140831661 + 7.86 0.000 TTS (NM_031848) TTS (NM_031848) -2730 NM_018910 56141 Hs.199343 NM_018910 ENSG00000204963 PCDHA7 CNR4|CNRN4|CNRS4|CRNR4|PCDH-ALPHA7 protocadherin alpha 7 protein-coding chrX-417 chrX 11875812 11876056 + 7.86 0.000 intron (NM_001368398, intron 2 of 18) AluY|SINE|Alu 53495 NM_001368398 9758 Hs.657507 NM_014728 ENSG00000169933 FRMPD4 MRX104|PDZD10|PDZK10 FERM and PDZ domain containing 4 protein-coding chr11-1370 chr11 127824574 127824818 + 7.86 0.000 Intergenic AluYg6|SINE|Alu -384070 NR_146647 105369564 Hs.591937 NR_146647 ENSG00000272575 LINC02098 - long intergenic non-protein coding RNA 2098 ncRNA chr12-727 chr12 7836092 7836336 + 7.86 0.000 intron (NM_001286237, intron 1 of 9) MER33|DNA|hAT-Charlie 36701 NM_001286235 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding chr5-901 chr5 85916041 85916285 + 7.86 0.000 Intergenic L1M4|LINE|L1 -366281 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr20-561 chr20 25438474 25438718 + 7.86 0.000 intron (NM_021067, intron 5 of 6) AluYj4|SINE|Alu 30913 NR_134574 9837 Hs.658464 NM_021067 ENSG00000101003 GINS1 IMD55|PSF1 GINS complex subunit 1 protein-coding chr20-530 chr20 5027714 5027958 + 7.86 0.000 Intergenic SVA_F|Retroposon|SVA -17523 NM_203327 9962 Hs.516866 NM_005116 ENSG00000089057 SLC23A2 NBTL1|SLC23A1|SVCT2|YSPL2 solute carrier family 23 member 2 protein-coding chr1-2636 chr1 213189269 213189513 + 7.86 0.000 intron (NR_146209, intron 8 of 11) AluSx1|SINE|Alu 138150 NM_012424 26750 Hs.591416 NM_012424 ENSG00000136643 RPS6KC1 RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1 ribosomal protein S6 kinase C1 protein-coding chr13-477 chr13 57735533 57735777 + 7.86 0.000 Intergenic AluSz|SINE|Alu 103911 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding chr11-978 chr11 25076659 25076903 + 7.86 0.000 intron (NM_001009909, intron 10 of 11) intron (NM_001009909, intron 10 of 11) 579728 NM_001252008 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding chr3-858 chr3 120274057 120274301 + 7.86 0.000 Intergenic AluSg4|SINE|Alu -29884 NM_001168271 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding chr13-391 chr13 56701145 56701389 + 7.86 0.000 Intergenic AluSx|SINE|Alu -439651 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr5-1074 chr5 101907216 101907460 + 7.86 0.000 Intergenic AluSc8|SINE|Alu 388946 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding chr6-662 chr6 17929088 17929332 + 7.86 0.000 intron (NM_001105567, intron 2 of 36) (GA)n|Simple_repeat|Simple_repeat 58425 NM_001105568 63971 Hs.94499 NM_022113 ENSG00000137177 KIF13A RBKIN|bA500C11.2 kinesin family member 13A protein-coding chr14-746 chr14 72927122 72927366 + 7.86 0.000 intron (NM_181340, intron 1 of 12) intron (NM_181340, intron 1 of 12) 780 NM_001163508 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding chrX-563 chrX 151830198 151830442 + 7.86 0.000 Intergenic Intergenic 80763 NR_136578 105373368 Hs.256904 NR_136578 MAGEA4-AS1 - MAGEA4 antisense RNA 1 ncRNA chr9-1245 chr9 90985228 90985472 + 7.86 0.000 Intergenic Intergenic 89782 NR_033912 100129316 Hs.458154 NR_033912 LOC100129316 - uncharacterized LOC100129316 ncRNA chr1-1449 chr1 225653107 225653351 + 7.86 0.000 promoter-TSS (NM_018212) promoter-TSS (NM_018212) -106 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding chr15-569 chr15 63082011 63082255 + 7.86 0.000 Intergenic AluJr|SINE|Alu -32746 NR_147233 111064646 Hs.602995 NR_147233 TPM1-AS TPM1-AS1 TPM1 antisense RNA ncRNA chr5-699 chr5 157569406 157569650 + 7.86 0.000 intron (NM_033274, intron 2 of 22) AluJr|SINE|Alu 6247 NM_033274 8728 Hs.483944 NM_023038 ENSG00000135074 ADAM19 FKSG34|MADDAM|MLTNB ADAM metallopeptidase domain 19 protein-coding chr2-1562 chr2 221873358 221873602 + 7.86 0.000 Intergenic AluSg|SINE|Alu -299278 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr1-931 chr1 42484012 42484256 + 7.86 0.000 intron (NM_001355227, intron 3 of 18) intron (NM_001355227, intron 3 of 18) 20848 NM_001355224 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding chr12-1007 chr12 120666319 120666563 + 7.86 0.000 intron (NM_001033677, intron 5 of 5) AluSx|SINE|Alu 16164 NM_004276 9478 Hs.458482 NM_004276 ENSG00000157782 CABP1 CALBRAIN|HCALB_BR calcium binding protein 1 protein-coding chr16-960 chr16 71608940 71609184 + 7.86 0.000 Intergenic AluSz|SINE|Alu -17122 NM_001271329 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr9-1104 chr9 116919791 116920035 + 7.86 0.000 intron (NM_014010, intron 9 of 21) AluJb|SINE|Alu 232608 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr11-1366 chr11 125511716 125511960 + 7.86 0.000 Intergenic LTR61|LTR|ERV1 -15528 NM_022549 9638 Hs.224008 NM_005103 ENSG00000149557 FEZ1 UNC-76 fasciculation and elongation protein zeta 1 protein-coding chr9-491 chr9 129847172 129847416 + 7.86 0.000 intron (NM_001008563, intron 1 of 25) intron (NM_001008563, intron 1 of 25) 11836 NM_001110303 10868 Hs.5452 NM_006676 ENSG00000136878 USP20 LSFR3A|VDU2|hVDU2 ubiquitin specific peptidase 20 protein-coding chr1-1332 chr1 46364114 46364358 + 7.86 0.000 non-coding (NR_045789, exon 7 of 7) non-coding (NR_045789, exon 7 of 7) 23058 NM_001256128 387338 Hs.163424 NM_199044 ENSG00000117481 NSUN4 SHTAP NOP2/Sun RNA methyltransferase 4 protein-coding chr14-690 chr14 34843000 34843244 + 7.86 0.000 intron (NM_013448, intron 3 of 26) intron (NM_013448, intron 3 of 26) -31069 NR_160776 112268124 Hs.509140 NR_160776 LOC112268124 - uncharacterized LOC112268124 ncRNA chr7-1204 chr7 3027792 3028036 + 7.86 0.000 intron (NM_001324281, intron 1 of 25) AluJb|SINE|Alu 15953 NM_032415 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding chr20-510 chr20 62861162 62861406 + 7.86 0.000 exon (NM_006602, exon 1 of 6) exon (NM_006602, exon 1 of 6) 538 NM_006602 10732 Hs.126248 NM_006602 ENSG00000101190 TCFL5 CHA|E2BP-1|Figlb|SOSF1|bHLHe82 transcription factor like 5 protein-coding chr7-635 chr7 71031516 71031760 + 7.86 0.000 Intergenic Intergenic -100506 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr4-624 chr4 153484993 153485237 + 7.86 0.000 intron (NM_001131007, intron 3 of 34) AluYk2|SINE|Alu 18755 NM_001131007 23240 Hs.732450 NM_015196 ENSG00000121210 TMEM131L KIAA0922 transmembrane 131 like protein-coding chr19-1630 chr19 45285222 45285466 + 7.86 0.000 intron (NM_001199867, intron 12 of 16) intron (NM_001199867, intron 12 of 16) 34073 NM_031417 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr7-1257 chr7 32387514 32387758 + 7.86 0.000 intron (NM_001322059, intron 1 of 17) SVA_E|Retroposon|SVA 40588 NM_001322059 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding chr1-2390 chr1 53439244 53439488 + 7.86 0.000 intron (NR_002314, intron 1 of 1) CpG 654 NR_002314 163742 Hs.99394 NR_002314 ENSG00000236253 SLC25A3P1 - solute carrier family 25 member 3 pseudogene 1 pseudo chr10-1110 chr10 27084094 27084338 + 7.86 0.000 intron (NM_014915, intron 5 of 33) AluSp|SINE|Alu 16282 NM_014915 22852 Hs.361041 NM_014915 ENSG00000107890 ANKRD26 THC2|bA145E8.1 ankyrin repeat domain 26 protein-coding chr10-949 chr10 128393014 128393258 + 7.86 0.000 Intergenic Intergenic 107186 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA chr7-1344 chr7 98242998 98243242 + 7.86 0.000 intron (NM_015395, intron 6 of 25) (CACC)n|Simple_repeat|Simple_repeat 9112 NM_015395 25851 Hs.592281 NM_015395 ENSG00000205356 TECPR1 - tectonin beta-propeller repeat containing 1 protein-coding chr9-1018 chr9 135129231 135129475 + 7.86 0.000 Intergenic Intergenic 41685 NM_001282611 10439 Hs.522484 NM_006334 ENSG00000130558 OLFM1 AMY|NOE1|NOELIN1|OlfA olfactomedin 1 protein-coding chr4-716 chr4 88328433 88328677 + 7.86 0.000 intron (NR_134237, intron 3 of 3) MER21A|LTR|ERVL 43625 NR_134237 105369192 Hs.733660 NR_134236 ENSG00000246375 PPM1K-DT - PPM1K divergent transcript ncRNA chr4-667 chr4 7255870 7256114 + 7.86 0.000 intron (NM_020777, intron 1 of 26) intron (NM_020777, intron 1 of 26) -54458 NR_039961 100616471 NR_039961 ENSG00000264658 MIR4798 - microRNA 4798 ncRNA chr7-1044 chr7 148873405 148873649 + 7.86 0.000 intron (NM_001203247, intron 1 of 19) intron (NM_001203247, intron 1 of 19) 9958 NM_001203249 2146 Hs.444082 NM_004456 ENSG00000106462 EZH2 ENX-1|ENX1|EZH2b|KMT6|KMT6A|WVS|WVS2 enhancer of zeste 2 polycomb repressive complex 2 subunit protein-coding chr3-1104 chr3 25783481 25783725 + 7.71 0.000 promoter-TSS (NM_001145293) promoter-TSS (NM_001145293) -105 NM_001145295 55768 Hs.368960 NM_018297 ENSG00000151092 NGLY1 CDDG|CDG1V|PNG1|PNGase N-glycanase 1 protein-coding chr17-973 chr17 42791865 42792109 + 7.71 0.000 intron (NM_032387, intron 11 of 18) intron (NM_032387, intron 11 of 18) 6717 NM_001040431 28958 Hs.16059 NM_001040431 ENSG00000183978 COA3 CCDC56|COX25|HSPC009|MITRAC12 cytochrome c oxidase assembly factor 3 protein-coding chr2-1655 chr2 29246057 29246301 + 7.71 0.000 intron (NM_004304, intron 12 of 28) intron (NM_004304, intron 12 of 28) -22279 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding chr2-1674 chr2 40431681 40431925 + 7.71 0.000 intron (NM_001112802, intron 1 of 7) intron (NM_001112802, intron 1 of 7) -1499 NM_021097 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding chr3-812 chr3 2347309 2347553 + 7.71 0.000 intron (NM_175607, intron 3 of 24) AluSx1|SINE|Alu 108602 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr2-1109 chr2 108050239 108050483 + 7.71 0.000 intron (NR_135071, intron 1 of 2) GA-rich|Low_complexity|Low_complexity 2394 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA chr2-1933 chr2 219259329 219259573 + 7.71 0.000 intron (NM_001355221, intron 1 of 3) intron (NM_001355221, intron 1 of 3) -4843 NM_001278552 7277 Hs.75318 NM_006000 ENSG00000127824 TUBA4A ALS22|H2-ALPHA|TUBA1 tubulin alpha 4a protein-coding chr1-841 chr1 52090570 52090814 + 7.71 0.000 TTS (NM_001136497) TTS (NM_001136497) 34397 NM_152265 91408 Hs.429839 NM_152265 ENSG00000134717 BTF3L4 - basic transcription factor 3 like 4 protein-coding chr18-156 chr18 1197995 1198239 + 7.71 0.000 Intergenic AluJo|SINE|Alu 161512 NR_023926 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA chr12-974 chr12 60986304 60986548 + 7.71 0.000 Intergenic AluSg|SINE|Alu 1206413 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding chr17-1238 chr17 8210051 8210295 + 7.71 0.000 promoter-TSS (NM_001313951) promoter-TSS (NM_001313951) 52 NR_132731 9212 Hs.442658 NM_004217 ENSG00000178999 AURKB AIK2|AIM-1|AIM1|ARK-2|ARK2|AurB|IPL1|PPP1R48|STK-1|STK12|STK5|aurkb-sv1|aurkb-sv2 aurora kinase B protein-coding chr18-269 chr18 24581598 24581842 + 7.71 0.000 Intergenic AluSx3|SINE|Alu -46462 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA chr20-446 chr20 52128851 52129095 + 7.71 0.000 intron (NM_199427, intron 5 of 8) AluSx|SINE|Alu -23489 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr2-1892 chr2 194431627 194431871 + 7.71 0.000 Intergenic Intergenic 87480 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA chr2-876 chr2 221579447 221579691 + 7.71 0.000 Intergenic Intergenic -5367 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding chr5-1108 chr5 132777068 132777312 + 7.71 0.000 promoter-TSS (NM_015146) promoter-TSS (NM_015146) 49 NM_001300799 23176 Hs.522057 NM_015146 ENSG00000164402 SEPTIN8 SEP2|SEPT8 septin 8 protein-coding chr19-1296 chr19 53196824 53197068 + 7.71 0.000 Intergenic CpG -3588 NM_001353458 79788 Hs.745230 NM_024733 ENSG00000197497 ZNF665 ZFP160L zinc finger protein 665 protein-coding chr6-527 chr6 70632857 70633101 + 7.71 0.000 Intergenic L1MB8|LINE|L1 -34904 NM_001044305 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding chr10-360 chr10 30349041 30349285 + 7.71 0.000 exon (NM_018109, exon 1 of 9) exon (NM_018109, exon 1 of 9) 175 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding chr11-1275 chr11 38337200 38337444 + 7.71 0.000 Intergenic Intergenic 309034 NR_120555 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA chr8-295 chr8 30852002 30852246 + 7.71 0.000 intron (NR_146525, intron 6 of 6) AluYc3|SINE|Alu 36582 NR_146525 56154 Hs.458316 NM_001350162 ENSG00000133863 TEX15 CT42|SPGF25 testis expressed 15, meiosis and synapsis associated protein-coding chr19-940 chr19 9970310 9970554 + 7.71 0.000 intron (NM_015719, intron 54 of 66) intron (NM_015719, intron 54 of 66) -33917 NM_058164 93145 Hs.169743 NM_058164 ENSG00000105088 OLFM2 NOE2|NOELIN2|NOELIN2_V1|OlfC olfactomedin 2 protein-coding chr16-1088 chr16 26897806 26898050 + 7.71 0.000 Intergenic AluSx1|SINE|Alu -168999 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding chr17-1406 chr17 75721201 75721445 + 7.71 0.000 promoter-TSS (NM_000213) promoter-TSS (NM_000213) -136 NM_001321123 3691 Hs.632226 NM_000213 ENSG00000132470 ITGB4 CD104|GP150 integrin subunit beta 4 protein-coding chr1-2547 chr1 165026645 165026889 + 7.71 0.000 Intergenic AluSc|SINE|Alu -252126 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA chr1-2207 chr1 7548441 7548685 + 7.71 0.000 intron (NM_001349608, intron 5 of 21) intron (NM_001349608, intron 5 of 21) -121167 NM_001349623 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr7-1347 chr7 100251250 100251494 + 7.71 0.000 intron (NR_028038, intron 1 of 6) AluY|SINE|Alu 20833 NR_028038 352954 Hs.556063 NM_178831 ENSG00000239521 CASTOR3 GATS|STAG3OS CASTOR family member 3 protein-coding chr2-1149 chr2 203915658 203915902 + 7.71 0.000 Intergenic Intergenic -20968 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding chr5-1014 chr5 38861860 38862104 + 7.71 0.000 intron (NM_003999, intron 1 of 17) SVA_D|Retroposon|SVA 15970 NM_001323506 9180 Hs.120658 NM_003999 ENSG00000145623 OSMR IL-31R-beta|IL-31RB|OSMRB|PLCA1 oncostatin M receptor protein-coding chr1-2171 chr1 2003682 2003926 + 7.71 0.000 promoter-TSS (NM_001304360) promoter-TSS (NM_001304360) -18 NM_001304360 85452 Hs.232092 NM_001003808 ENSG00000142609 CFAP74 C1orf222|KIAA1751 cilia and flagella associated protein 74 protein-coding chr19-1213 chr19 17583466 17583710 + 7.71 0.000 TTS (NM_024656) TTS (NM_024656) 27939 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr10-1063 chr10 131958255 131958499 + 7.71 0.000 non-coding (NR_033191, exon 10 of 10) non-coding (NR_033191, exon 10 of 10) 23636 NM_004052 664 Hs.144873 NM_004052 ENSG00000176171 BNIP3 NIP3 BCL2 interacting protein 3 protein-coding chr18-234 chr18 35972420 35972664 + 7.71 0.000 promoter-TSS (NM_001201474) promoter-TSS (NM_001201474) -83 NM_001201476 83608 Hs.37883 NM_031446 ENSG00000141428 C18orf21 HsT3108|PNAS-124|PNAS-131|XTP13 chromosome 18 open reading frame 21 protein-coding chr18-280 chr18 49055880 49056124 + 7.71 0.000 intron (NM_001353210, intron 16 of 16) intron (NM_001353210, intron 16 of 16) -6234 NR_039898 100616420 NR_039898 ENSG00000263849 MIR4744 - microRNA 4744 ncRNA chr15-609 chr15 27424352 27424596 + 7.71 0.000 intron (NM_001270873, intron 5 of 5) MLT1A1|LTR|ERVL-MaLR -263155 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA chr1-1205 chr1 165591229 165591473 + 7.71 0.000 Intergenic AluJb|SINE|Alu -9196 NR_026744 400794 Hs.374847 NR_026744 ENSG00000237463 LRRC52-AS1 - LRRC52 antisense RNA 1 ncRNA chr17-933 chr17 11201776 11202020 + 7.71 0.000 Intergenic AluY|SINE|Alu -39315 NM_207386 388336 Hs.592124 NM_175903 ENSG00000188803 SHISA6 - shisa family member 6 protein-coding chr6-939 chr6 31454918 31455162 + 7.71 0.000 Intergenic SVA_D|Retroposon|SVA -8140 NR_040662 10866 Hs.691948 NR_040662 ENSG00000206337 HCP5 6S2650E|D6S2650E|P5-1 HLA complex P5 ncRNA chr1-2002 chr1 22808916 22809160 + 7.71 0.000 intron (NM_004442, intron 3 of 15) intron (NM_004442, intron 3 of 15) 54188 NR_036214 100422914 NR_036214 ENSG00000264014 MIR4253 - microRNA 4253 ncRNA chr6-1103 chr6 154559004 154559248 + 7.71 0.000 Intergenic Intergenic -48441 NM_001368117 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding chr16-422 chr16 21018957 21019201 + 7.71 0.000 intron (NM_001347886, intron 41 of 61) intron (NM_001347886, intron 41 of 61) 117817 NM_001369645 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding chr13-424 chr13 20258741 20258985 + 7.71 0.000 Intergenic Intergenic -26468 NM_001110221 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr1-2203 chr1 6715186 6715430 + 7.71 0.000 Intergenic SVA_D|Retroposon|SVA -9437 NR_104620 100505887 Hs.250839 NR_104620 LINC01672 NMR long intergenic non-protein coding RNA 1672 ncRNA chrX-309 chrX 72131833 72132077 + 7.71 0.000 promoter-TSS (NM_001024455) promoter-TSS (NM_001024455) -40 NM_001024455 340526 Hs.512180 NM_001024455 ENSG00000242732 RTL5 6430402L03Rik|MAR5|MART5|RGAG4|SIRH8 retrotransposon Gag like 5 protein-coding chr4-1024 chr4 93828834 93829078 + 7.56 0.000 exon (NM_005172, exon 1 of 1) exon (NM_005172, exon 1 of 1) 203 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding chr19-1386 chr19 47238402 47238646 + 7.56 0.000 Intergenic AluSx|SINE|Alu -5857 NM_001127241 27113 Hs.467020 NM_014417 ENSG00000105327 BBC3 JFY-1|JFY1|PUMA BCL2 binding component 3 protein-coding chr9-1289 chr9 112864995 112865239 + 7.56 0.000 intron (NM_001012994, intron 8 of 8) (CA)n|Simple_repeat|Simple_repeat 25759 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding chr1-1392 chr1 150622788 150623032 + 7.56 0.000 TTS (NM_207047) TTS (NM_207047) 6223 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding chr5-70 chr5 11468 11712 + 7.56 0.000 Intergenic (TAACCC)n|Simple_repeat|Simple_repeat -80578 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding chr6-800 chr6 41681992 41682236 + 7.56 0.000 Intergenic Intergenic 43646 NM_001300805 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding chr16-1174 chr16 74887965 74888209 + 7.56 0.000 intron (NM_030581, intron 22 of 25) AluSx|SINE|Alu 97036 NM_030581 79726 Hs.280951 NM_030581 ENSG00000103091 WDR59 CDW12|FP977|p90-120 WD repeat domain 59 protein-coding chr1-1944 chr1 229434108 229434352 + 7.56 0.000 promoter-TSS (NM_001100) promoter-TSS (NM_001100) -134 NM_001100 58 Hs.1288 NM_001100 ENSG00000143632 ACTA1 ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM actin alpha 1, skeletal muscle protein-coding chr6-706 chr6 97671852 97672096 + 7.56 0.000 intron (NR_110757, intron 3 of 4) AluSz6|SINE|Alu -352557 NR_031579 100302164 NR_031579 ENSG00000238367 MIR2113 hsa-mir-2113 microRNA 2113 ncRNA chr2-446 chr2 64375601 64375845 + 7.56 0.000 Intergenic Intergenic -34875 NR_106995 102465833 NR_106995 ENSG00000264297 MIR4433B hsa-mir-4433b microRNA 4433b ncRNA chr7-1238 chr7 24458249 24458493 + 7.56 0.000 Intergenic AluSx3|SINE|Alu -115081 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding chr3-1065 chr3 185531313 185531557 + 7.56 0.000 intron (NM_139248, intron 3 of 9) AluJo|SINE|Alu 21153 NM_139248 200879 Hs.68864 NM_139248 ENSG00000163898 LIPH AH|ARWH2|HYPT7|LAH2|LPDLR|PLA1B|mPA-PLA1 lipase H protein-coding chr16-493 chr16 83945534 83945778 + 7.56 0.000 Intergenic AluSq10|SINE|Alu -7584 NM_182981 29948 Hs.128055 NM_013370 ENSG00000140961 OSGIN1 BDGI|OKL38 oxidative stress induced growth inhibitor 1 protein-coding chr22-626 chr22 23039473 23039717 + 7.56 0.000 Intergenic AluSc8|SINE|Alu -30924 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding chr9-1247 chr9 91193735 91193979 + 7.56 0.000 Intergenic CpG 74795 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA KI270733.1-17 KI270733.1 129918 130162 + 7.56 0.000 NA NA NA NA chr4-515 chr4 37881096 37881340 + 7.56 0.000 Intergenic MER58B|DNA|hAT-Charlie -9866 NM_001253912 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chr3-1181 chr3 182492767 182493011 + 7.56 0.000 Intergenic Intergenic -6527 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA chr8-572 chr8 99915026 99915270 + 7.56 0.000 Intergenic L1MC4|LINE|L1 -21441 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding chrX-501 chrX 96457063 96457307 + 7.56 0.000 Intergenic AluJb|SINE|Alu -119283 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo chr5-751 chr5 68363948 68364192 + 7.56 0.000 Intergenic FLAM_C|SINE|Alu 71493 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding chr18-321 chr18 27425025 27425269 + 7.56 0.000 Intergenic AluY|SINE|Alu -82491 NR_134589 105372038 Hs.722107 NR_134589 ENSG00000264151 LOC105372038 - uncharacterized LOC105372038 ncRNA chr18-249 chr18 56065352 56065596 + 7.56 0.000 intron (NR_148972, intron 3 of 8) AluSx|SINE|Alu 23196 NR_146510 102724698 NR_146510 ENSG00000267057 LINC01905 - long intergenic non-protein coding RNA 1905 ncRNA chrX-68 chrX 81126039 81126283 + 7.56 0.000 intron (NM_030763, intron 1 of 6) AluSx1|SINE|Alu 75752 NM_030763 79366 Hs.282204 NM_030763 ENSG00000198157 HMGN5 NBP-45|NSBP1 high mobility group nucleosome binding domain 5 protein-coding chrX-431 chrX 27112079 27112323 + 7.56 0.000 Intergenic AluSp|SINE|Alu 351140 NM_207319 139420 Hs.350673 NM_207319 ENSG00000224960 PPP4R3C FLFL3P|PPP4R3CP|SMEK3P|smk1 protein phosphatase 4 regulatory subunit 3C protein-coding chr1-2277 chr1 20647304 20647548 + 7.56 0.000 intron (NM_032409, intron 5 of 7) AluSz6|SINE|Alu 4767 NR_046507 100861548 Hs.710259 NR_046507 ENSG00000117242 PINK1-AS NAPINK1|PINK1-AS1|PINK1AS PINK1 antisense RNA ncRNA chr11-1200 chr11 103872093 103872337 + 7.56 0.000 Intergenic Intergenic 22309 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA chr12-820 chr12 42539390 42539634 + 7.56 0.000 intron (NM_153026, intron 1 of 7) intron (NM_153026, intron 1 of 7) 50234 NM_153026 144165 Hs.524348 NM_153026 ENSG00000139174 PRICKLE1 EPM1B|RILP prickle planar cell polarity protein 1 protein-coding chr8-876 chr8 55875327 55875571 + 7.56 0.000 Intergenic Intergenic -4386 NM_001111097 4067 Hs.491767 NM_002350 ENSG00000254087 LYN JTK8|p53Lyn|p56Lyn LYN proto-oncogene, Src family tyrosine kinase protein-coding chr14-693 chr14 37727118 37727362 + 7.56 0.000 intron (NM_001310135, intron 9 of 32) intron (NM_001310135, intron 9 of 32) -45143 NM_001368142 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding chr12-1005 chr12 120602551 120602795 + 7.56 0.000 Intergenic LTR33|LTR|ERVL -21271 NM_015918 51367 Hs.279913 NM_015918 ENSG00000167272 POP5 HSPC004|RPP2|RPP20|hPop5 POP5 homolog, ribonuclease P/MRP subunit protein-coding chr7-849 chr7 100706118 100706362 + 7.56 0.000 5' UTR (NM_005837, exon 1 of 2) 5' UTR (NM_005837, exon 1 of 2) 119 NM_005837 10248 Hs.416994 NM_005837 ENSG00000172336 POP7 0610037N12Rik|RPP2|RPP20 POP7 homolog, ribonuclease P/MRP subunit protein-coding chr16-1182 chr16 80027198 80027442 + 7.56 0.000 Intergenic Intergenic 232071 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA chr2-561 chr2 98444732 98444976 + 7.56 0.000 promoter-TSS (NM_004027) promoter-TSS (NM_004027) -4 NM_004027 3631 Hs.469386 NM_001566 ENSG00000040933 INPP4A INPP4|TVAS1 inositol polyphosphate-4-phosphatase type I A protein-coding chr16-955 chr16 68495818 68496062 + 7.56 0.000 Intergenic AluSq2|SINE|Alu -43273 NM_001305204 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding chr3-1298 chr3 51642331 51642575 + 7.56 0.000 intron (NM_001322257, intron 14 of 21) MER106A|DNA|hAT-Charlie -28722 NR_024012 51368 Hs.517864 NM_015926 ENSG00000164081 TEX264 ZSIG11 testis expressed 264, ER-phagy receptor protein-coding chrX-560 chrX 149798674 149798918 + 7.56 0.000 Intergenic AluSc|SINE|Alu 16859 NM_005365 4108 Hs.460974 NM_005365 ENSG00000123584 MAGEA9 CT1.9|MAGE9 MAGE family member A9 protein-coding chr14-380 chr14 99793248 99793492 + 7.56 0.000 promoter-TSS (NM_001008707) promoter-TSS (NM_001008707) -43 NM_001008707 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr15-558 chr15 48062823 48063067 + 7.56 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -58045 NM_205850 283652 Hs.710240 NM_205850 ENSG00000188467 SLC24A5 JSX|NCKX5|OCA6|SHEP4 solute carrier family 24 member 5 protein-coding chr7-1249 chr7 30134895 30135139 + 7.56 0.000 promoter-TSS (NM_152793) promoter-TSS (NM_152793) 31 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding chr5-818 chr5 148605158 148605402 + 7.56 0.000 intron (NM_001040172, intron 1 of 5) AluSq2|SINE|Alu 31781 NM_001040173 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding chr1-2567 chr1 174925684 174925928 + 7.56 0.000 intron (NM_001366451, intron 5 of 12) intron (NM_001366451, intron 5 of 12) 28455 NR_121196 101928696 Hs.666680 NR_121196 ENSG00000229531 LOC101928696 - uncharacterized LOC101928696 ncRNA chr3-1314 chr3 57196842 57197086 + 7.56 0.000 TTS (NM_003865) TTS (NM_003865) 3014 NM_003865 8820 Hs.171980 NM_003865 ENSG00000163666 HESX1 ANF|CPHD5|RPX HESX homeobox 1 protein-coding chr12-1034 chr12 3252599 3252843 + 7.56 0.000 intron (NM_001168320, intron 2 of 7) intron (NM_001168320, intron 2 of 7) 113401 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA chr2-1116 chr2 120684371 120684615 + 7.56 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -51375 NM_001371271 chr7-1442 chr7 150737349 150737593 + 7.56 0.000 5' UTR (NM_018384, exon 1 of 3) 5' UTR (NM_018384, exon 1 of 3) 123 NM_018384 55340 Hs.647079 NM_018384 ENSG00000196329 GIMAP5 HIMAP3|IAN-5|IAN4|IAN4L1|IAN5|IMAP3|IROD GTPase, IMAP family member 5 protein-coding chrX-305 chrX 55748629 55748873 + 7.56 0.000 intron (NR_148687, intron 6 of 12) SVA_D|Retroposon|SVA 31002 NR_148685 10325 Hs.50282 NM_006064 ENSG00000083750 RRAGB RAGB|bA465E19.1 Ras related GTP binding B protein-coding chr4-806 chr4 21241997 21242241 + 7.56 0.000 intron (NM_147182, intron 2 of 8) AluY|SINE|Alu 61787 NM_147183 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding chr3-1089 chr3 5015068 5015312 + 7.56 0.000 Intergenic Intergenic -35229 NR_037903 100507582 Hs.434505 NR_037903 ENSG00000235831 BHLHE40-AS1 - BHLHE40 antisense RNA 1 ncRNA chr19-1105 chr19 45251048 45251292 + 7.56 0.000 promoter-TSS (NM_031417) promoter-TSS (NM_031417) -101 NM_001199867 57787 Hs.34314 NM_031417 ENSG00000007047 MARK4 MARK4L|MARK4S|MARKL1|MARKL1L|PAR-1D microtubule affinity regulating kinase 4 protein-coding chr3-1280 chr3 49197789 49198033 + 7.56 0.000 promoter-TSS (NM_178173) promoter-TSS (NM_178173) -517 NM_178173 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr3-1309 chr3 54249648 54249892 + 7.56 0.000 intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 127218 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding chr6-846 chr6 121454800 121455044 + 7.56 0.000 Intergenic Intergenic 19276 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr19-1563 chr19 21486326 21486570 + 7.41 0.000 intron (NR_037194, intron 2 of 10) SVA_D|Retroposon|SVA 2733 NR_037194 400680 Hs.710554 NR_037194 ENSG00000268658 LINC00664 - long intergenic non-protein coding RNA 664 ncRNA chr1-475 chr1 26213500 26213744 + 7.41 0.000 Intergenic AluJr|SINE|Alu -11698 NR_110698 101928303 Hs.375067 NR_110698 ENSG00000236155 LOC101928303 - uncharacterized LOC101928303 ncRNA chr6-601 chr6 42909161 42909405 + 7.41 0.000 Intergenic AluYc|SINE|Alu -6706 NM_001243169 171558 Hs.169002 NM_138296 ENSG00000171611 PTCRA PT-ALPHA|PTA pre T cell antigen receptor alpha protein-coding chr20-387 chr20 62178050 62178294 + 7.41 0.000 intron (NR_125980, intron 11 of 12) AluSz|SINE|Alu -4853 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding chrX-476 chrX 65668730 65668974 + 7.41 0.000 intron (NM_002444, intron 1 of 12) intron (NM_002444, intron 1 of 12) 1198 NM_002444 4478 Hs.87752 NM_002444 ENSG00000147065 MSN HEL70|IMD50 moesin protein-coding chr2-1066 chr2 10723741 10723985 + 7.41 0.000 intron (NM_001039362, intron 2 of 13) intron (NM_001039362, intron 2 of 13) 2233 NM_001039362 245973 Hs.580464 NM_144583 ENSG00000143882 ATP6V1C2 ATP6C2|VMA5 ATPase H+ transporting V1 subunit C2 protein-coding chr12-966 chr12 53676680 53676924 + 7.41 0.000 promoter-TSS (NM_001369757) promoter-TSS (NM_001369757) -472 NM_001002031 517 Hs.524464 NM_005176 ENSG00000135390 ATP5MC2 ATP5A|ATP5G2 ATP synthase membrane subunit c locus 2 protein-coding chr8-652 chr8 91436292 91436536 + 7.41 0.000 Intergenic AluSc|SINE|Alu 187095 NM_052832 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding chr3-1316 chr3 58008128 58008372 + 7.41 0.000 promoter-TSS (NM_001164317) promoter-TSS (NM_001164317) -172 NM_001164319 2317 Hs.476448 NM_001457 ENSG00000136068 FLNB ABP-278|ABP-280|AOI|FH1|FLN-B|FLN1L|LRS1|SCT|TABP|TAP filamin B protein-coding chr22-356 chr22 43789821 43790065 + 7.41 0.000 intron (NM_022785, intron 2 of 31) intron (NM_022785, intron 2 of 31) 22362 NM_198856 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding chr20-321 chr20 21259788 21260032 + 7.41 0.000 Intergenic L1MB3|LINE|L1 -41621 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA chr3-830 chr3 41469453 41469697 + 7.41 0.000 intron (NR_136342, intron 30 of 34) L1MA7|LINE|L1 270070 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding chr1-1881 chr1 179769722 179769966 + 7.41 0.000 intron (NM_001329719, intron 1 of 4) intron (NM_001329719, intron 1 of 4) 26553 NM_001329712 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding chr9-718 chr9 130848308 130848552 + 7.41 0.000 intron (NM_005157, intron 1 of 10) AluSz6|SINE|Alu 13176 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding chr1-551 chr1 110117049 110117293 + 7.41 0.000 Intergenic Intergenic 4728 NM_203412 164153 Hs.374027 NM_203412 ENSG00000186150 UBL4B - ubiquitin like 4B protein-coding chrX-219 chrX 112956460 112956704 + 7.41 0.000 Intergenic AluSq2|SINE|Alu -86145 NR_110399 101928437 Hs.640112 NR_110399 LOC101928437 - uncharacterized LOC101928437 ncRNA chr4-662 chr4 5262471 5262715 + 7.41 0.000 intron (NM_001306082, intron 4 of 12) AluY|SINE|Alu 211113 NM_001306082 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding chr1-1596 chr1 232022163 232022407 + 7.41 0.000 intron (NM_001164537, intron 12 of 13) intron (NM_001164537, intron 12 of 13) 96451 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA chr17-1264 chr17 19289586 19289830 + 7.41 0.000 intron (NM_014964, intron 4 of 10) intron (NM_014964, intron 4 of 10) 16553 NR_048576 100874018 Hs.621672 NR_048576 ENSG00000235397 EPN2-AS1 - EPN2 antisense RNA 1 ncRNA chrX-500 chrX 88118549 88118793 + 7.41 0.000 Intergenic AluY|SINE|Alu 600869 NM_019117 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding chr17-1270 chr17 21452905 21453149 + 7.41 0.000 Intergenic CpG 76670 NM_021012 3768 Hs.200629 NM_021012 ENSG00000184185 KCNJ12 IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x potassium voltage-gated channel subfamily J member 12 protein-coding chr1-2018 chr1 33048170 33048414 + 7.41 0.000 Intergenic AluSc|SINE|Alu -11381 NM_001319143 204 Hs.470907 NM_001625 ENSG00000004455 AK2 ADK2 adenylate kinase 2 protein-coding chr17-994 chr17 49576711 49576955 + 7.41 0.000 intron (NM_007225, intron 1 of 1) CpG 962 NM_007225 11248 Hs.55069 NM_007225 ENSG00000182575 NXPH3 NPH3 neurexophilin 3 protein-coding chrX-238 chrX 22420853 22421097 + 7.41 0.000 intron (NR_073010, intron 4 of 11) LTR16D1|LTR|ERVL 148062 NM_152577 158506 Hs.132485 NM_152577 ENSG00000175809 CBLL2 CT138|HAKAIL|ZNF645 Cbl proto-oncogene like 2 protein-coding chr10-780 chr10 5565696 5565940 + 7.41 0.000 Intergenic Intergenic 30300 NR_134491 105376382 Hs.460282 NR_134491 ENSG00000242147 LINC02657 - long intergenic non-protein coding RNA 2657 ncRNA chr9-1300 chr9 116854483 116854727 + 7.41 0.000 intron (NM_014010, intron 10 of 21) intron (NM_014010, intron 10 of 21) 167300 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding chr4-684 chr4 34307977 34308221 + 7.41 0.000 Intergenic L1M4b|LINE|L1 -38352 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA chr7-1111 chr7 67225159 67225403 + 7.41 0.000 intron (NR_134540, intron 14 of 14) MIRb|SINE|MIR 77161 NR_046297 5382 Hs.712714 NR_022007 ENSG00000067601 PMS2P4 PMS2L4|PMS6 PMS1 homolog 2, mismatch repair system component pseudogene 4 pseudo chr6-1132 chr6 168269793 168270037 + 7.41 0.000 Intergenic Intergenic 26977 NR_110870 101929420 Hs.571211 NR_110870 ENSG00000234647 LOC101929420 - uncharacterized LOC101929420 ncRNA chr1-2306 chr1 26804926 26805170 + 7.41 0.000 Intergenic AluY|SINE|Alu 16860 NM_001202554 55650 Hs.259605 NM_017837 ENSG00000060642 PIGV GPI-MT-II|HPMRS1|PIG-V phosphatidylinositol glycan anchor biosynthesis class V protein-coding chr2-1755 chr2 86185046 86185290 + 7.41 0.000 intron (NM_006839, intron 1 of 14) AluY|SINE|Alu 7940 NR_039939 100616159 NR_039939 ENSG00000265420 MIR4779 - microRNA 4779 ncRNA chr19-1119 chr19 50668974 50669218 + 7.41 0.000 exon (NM_016148, exon 23 of 24) exon (NM_016148, exon 23 of 24) 19651 NM_001195076 342918 Hs.531650 NM_001195076 ENSG00000235034 C19orf81 - chromosome 19 open reading frame 81 protein-coding chr6-494 chr6 16128780 16129024 + 7.41 0.000 promoter-TSS (NM_013262) promoter-TSS (NM_013262) -184 NM_013262 29116 Hs.484738 NM_013262 ENSG00000007944 MYLIP IDOL|MIR myosin regulatory light chain interacting protein protein-coding chr8-964 chr8 130016312 130016556 + 7.41 0.000 5' UTR (NM_001353290, exon 1 of 14) 5' UTR (NM_001353290, exon 1 of 14) 126 NM_001353290 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding chr5-1095 chr5 124366377 124366621 + 7.41 0.000 intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 72021 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA chr22-638 chr22 29205901 29206145 + 7.41 0.000 5' UTR (NM_133455, exon 1 of 15) 5' UTR (NM_133455, exon 1 of 15) 127 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding chr18-188 chr18 69026427 69026671 + 7.41 0.000 intron (NM_001093729, intron 9 of 9) intron (NM_001093729, intron 9 of 9) 228469 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding chrX-513 chrX 107716481 107716725 + 7.26 0.000 promoter-TSS (NM_001015881) promoter-TSS (NM_001015881) -95 NM_001015881 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr12-1011 chr12 122051802 122052046 + 7.26 0.000 intron (NM_001024808, intron 4 of 5) AluSx1|SINE|Alu -11366 NR_135044 100506691 Hs.536336 NR_135044 ENSG00000256546 LOC100506691 - uncharacterized LOC100506691 ncRNA chr7-738 chr7 66417093 66417337 + 7.26 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -16807 NR_026873 285908 Hs.50755 NM_181722 ENSG00000179406 LINC00174 NCRNA00174 long intergenic non-protein coding RNA 174 ncRNA chr3-1435 chr3 143992640 143992884 + 7.26 0.000 TTS (NM_173552) TTS (NM_173552) 19681 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding chr2-509 chr2 127190224 127190468 + 7.26 0.000 intron (NM_001001665, intron 7 of 7) AluSx1|SINE|Alu 15421 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding chr20-444 chr20 51085158 51085402 + 7.26 0.000 Intergenic Intergenic -62173 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding chr11-1632 chr11 105872516 105872760 + 7.26 0.000 intron (NR_046356, intron 4 of 16) intron (NR_046356, intron 4 of 16) 149602 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding chrX-245 chrX 39670385 39670629 + 7.26 0.000 Intergenic AluJb|SINE|Alu 9291 NR_037501 100500822 NR_037501 ENSG00000263730 MIR3937 - microRNA 3937 ncRNA chr22-569 chr22 28573073 28573317 + 7.26 0.000 intron (NM_001145418, intron 2 of 22) AluSc|SINE|Alu 106670 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding chr19-1638 chr19 45980677 45980921 + 7.26 0.000 Intergenic AluSx1|SINE|Alu -6934 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding chr8-559 chr8 40361026 40361270 + 7.26 0.000 Intergenic Intergenic -17785 NR_156738 112543493 NR_156738 SIRLNT lncRNA-PRLB SIRT1 regulating lncRNA tumor promoter ncRNA chr14-607 chr14 22510745 22510989 + 7.26 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat -27908 NR_148361 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA chr20-558 chr20 25195456 25195700 + 7.26 0.000 promoter-TSS (NM_001114089) promoter-TSS (NM_001114089) -92 NM_001322396 955 Hs.500375 NM_001247 ENSG00000197586 ENTPD6 CD39L2|IL-6SAG|IL6ST2|NTPDase-6|dJ738P15.3 ectonucleoside triphosphate diphosphohydrolase 6 protein-coding chr1-1630 chr1 3402761 3403005 + 7.26 0.000 exon (NM_199454, exon 6 of 17) exon (NM_199454, exon 6 of 17) -51782 NM_014448 27237 Hs.87435 NM_014448 ENSG00000130762 ARHGEF16 GEF16|NBR Rho guanine nucleotide exchange factor 16 protein-coding chr12-1277 chr12 126119351 126119595 + 7.26 0.000 Intergenic AluSz|SINE|Alu 23481 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000284848 LINC02359 - long intergenic non-protein coding RNA 2359 ncRNA chr5-1079 chr5 108219763 108220007 + 7.26 0.000 intron (NM_001163315, intron 5 of 8) L1MEc|LINE|L1 162213 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr3-1447 chr3 156826197 156826441 + 7.26 0.000 promoter-TSS (NM_001193283) promoter-TSS (NM_001193283) 12 NM_001004316 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding chr9-1231 chr9 79815116 79815360 + 7.26 0.000 Intergenic AluSp|SINE|Alu -9292 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA chr7-785 chr7 124032972 124033216 + 7.26 0.000 promoter-TSS (NM_001136002) promoter-TSS (NM_001136002) -27 NM_001136002 730130 Hs.450249 NM_001136002 ENSG00000234224 TMEM229A - transmembrane protein 229A protein-coding chr10-1312 chr10 124378431 124378675 + 7.26 0.000 Intergenic Intergenic 40370 NM_001322965 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding chr1-2495 chr1 146938989 146939233 + 7.26 0.000 intron (NM_001278141, intron 1 of 36) CpG 566 NM_001278141 149013 Hs.666981 NM_001278141 ENSG00000268043 NBPF12 COAS1|KIAA1245 NBPF member 12 protein-coding chr2-954 chr2 74471767 74472011 + 7.26 0.000 TTS (NM_032779) TTS (NM_032779) 791 NM_053050 116540 Hs.534527 NM_053050 ENSG00000204822 MRPL53 L53MT mitochondrial ribosomal protein L53 protein-coding chr19-1021 chr19 52062761 52063005 + 7.26 0.000 intron (NM_001369829, intron 7 of 7) AluSc8|SINE|Alu -14045 NM_014650 9668 Hs.655934 NM_014650 ENSG00000256087 ZNF432 - zinc finger protein 432 protein-coding chr21-88 chr21 10656217 10656461 + 7.26 0.000 Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 134825 NM_199261 7179 Hs.122986 NM_199259 ENSG00000274391 TPTE CT44|PTEN2 transmembrane phosphatase with tensin homology protein-coding chr7-853 chr7 105389065 105389309 + 7.26 0.000 promoter-TSS (NM_001350738) promoter-TSS (NM_001350738) 203 NM_001350740 6733 Hs.285197 NM_182691 ENSG00000135250 SRPK2 SFRSK2 SRSF protein kinase 2 protein-coding chr9-1152 chr9 137266997 137267241 + 7.26 0.000 intron (NM_015456, intron 9 of 12) intron (NM_015456, intron 9 of 12) -10607 NM_017723 54863 Hs.495541 NM_017723 ENSG00000198113 TOR4A C9orf167 torsin family 4 member A protein-coding chr6-822 chr6 79250369 79250613 + 7.26 0.000 Intergenic MER106B|DNA|hAT-Charlie -15809 NM_004242 9324 Hs.77558 NM_004242 ENSG00000118418 HMGN3 PNAS-24|PNAS-25|TRIP7 high mobility group nucleosomal binding domain 3 protein-coding chr6-916 chr6 14271212 14271456 + 7.26 0.000 Intergenic Intergenic 14120 NR_108096 102216342 Hs.563409 NR_108096 ENSG00000226673 LINC01108 LncRNA-ES1 long intergenic non-protein coding RNA 1108 ncRNA chr3-1278 chr3 48900723 48900967 + 7.26 0.000 Intergenic L2a|LINE|L2 -1963 NM_000387 788 Hs.13845 NM_000387 ENSG00000178537 SLC25A20 CAC|CACT solute carrier family 25 member 20 protein-coding chr10-1288 chr10 115970042 115970286 + 7.26 0.000 Intergenic Intergenic 224625 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA chr2-1168 chr2 235389450 235389694 + 7.26 0.000 Intergenic MIRb|SINE|MIR -104471 NM_014914 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding chr7-474 chr7 82944054 82944298 + 7.26 0.000 intron (NM_033026, intron 6 of 24) L3|LINE|CR1 218708 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding chr8-772 chr8 111997070 111997314 + 7.26 0.000 Intergenic L2a|LINE|L2 620553 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA chr7-1447 chr7 154084961 154085205 + 7.26 0.000 intron (NM_130797, intron 1 of 25) intron (NM_130797, intron 1 of 25) -24513 NR_136254 101929998 Hs.689473 NR_136254 LOC101929998 - uncharacterized LOC101929998 ncRNA chr4-623 chr4 153384081 153384325 + 7.26 0.000 intron (NR_045605, intron 6 of 9) intron (NR_045605, intron 6 of 9) 39515 NM_032117 84057 Hs.294088 NM_032117 ENSG00000121211 MND1 GAJ meiotic nuclear divisions 1 protein-coding chr4-703 chr4 76590369 76590613 + 7.26 0.000 intron (NM_020859, intron 2 of 10) intron (NM_020859, intron 2 of 10) 14940 NR_039655 100616254 NR_039655 ENSG00000283682 MIR548AH - microRNA 548ah ncRNA chr1-2302 chr1 26050490 26050734 + 7.26 0.000 TTS (NM_032588) TTS (NM_032588) -4494 NM_001004434 7780 Hs.143545 NM_032513 ENSG00000158014 SLC30A2 PP12488|TNZD|ZNT2|ZnT-2 solute carrier family 30 member 2 protein-coding chr1-1749 chr1 45559506 45559750 + 7.26 0.000 intron (NM_001202414, intron 3 of 10) AluSg|SINE|Alu 8802 NM_153326 10327 Hs.474584 NM_006066 ENSG00000117448 AKR1A1 ALDR1|ALR|ARM|DD3|HEL-S-6 aldo-keto reductase family 1 member A1 protein-coding chr12-882 chr12 101895079 101895323 + 7.26 0.000 intron (NM_018370, intron 1 of 6) (T)n|Simple_repeat|Simple_repeat 17621 NM_018370 55332 Hs.525634 NM_018370 ENSG00000136048 DRAM1 DRAM DNA damage regulated autophagy modulator 1 protein-coding chr4-1106 chr4 173808118 173808362 + 7.26 0.000 Intergenic Intergenic -89033 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA chr6-1089 chr6 150159520 150159764 + 7.26 0.000 intron (NM_030949, intron 1 of 3) L1MC3|LINE|L1 16598 NM_030949 81706 Hs.486798 NM_030949 ENSG00000198729 PPP1R14C CPI17-like|KEPI|NY-BR-81 protein phosphatase 1 regulatory inhibitor subunit 14C protein-coding chr2-994 chr2 152939115 152939359 + 7.26 0.000 Intergenic L1ME3A|LINE|L1 220600 NR_146431 151188 Hs.643580 NM_152522 ENSG00000177917 ARL6IP6 AIP-6|AIP6|PFAAP1 ADP ribosylation factor like GTPase 6 interacting protein 6 protein-coding chr8-969 chr8 130651415 130651659 + 7.26 0.000 Intergenic Intergenic -207863 NM_001362925 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding chr14-744 chr14 72013219 72013463 + 7.26 0.000 intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 79814 NM_001370284 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr19-910 chr19 1666027 1666271 + 7.26 0.000 Intergenic Intergenic -13534 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr5-750 chr5 65925616 65925860 + 7.26 0.000 promoter-TSS (NM_001253698) promoter-TSS (NM_001253698) -816 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding chr1-1416 chr1 180102017 180102261 + 7.26 0.000 intron (NM_014810, intron 37 of 37) AluSx|SINE|Alu -52694 NM_001004128 5768 Hs.719176 NM_002826 ENSG00000116260 QSOX1 Q6|QSCN6 quiescin sulfhydryl oxidase 1 protein-coding chr1-2081 chr1 157159248 157159492 + 7.26 0.000 Intergenic Intergenic -20779 NM_005240 2117 Hs.105636 NM_005240 ENSG00000117036 ETV3 METS|PE-1|PE1 ETS variant 3 protein-coding chr3-1254 chr3 42527267 42527511 + 7.26 0.000 intron (NM_001251883, intron 3 of 9) intron (NM_001251883, intron 3 of 9) 5217 NR_046654 100874007 Hs.600642 NR_046654 VIPR1-AS1 - VIPR1 antisense RNA 1 ncRNA chr3-1281 chr3 49214586 49214830 + 7.26 0.000 intron (NM_001135197, intron 2 of 7) AluSq2|SINE|Alu 15210 NM_001135197 339834 Hs.631931 NM_178173 ENSG00000173421 CCDC36 CT74 coiled-coil domain containing 36 protein-coding chr11-789 chr11 30745799 30746043 + 7.11 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -159568 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding chr9-1172 chr9 7016411 7016655 + 7.11 0.000 intron (NR_148680, intron 16 of 21) AluSx1|SINE|Alu 259183 NR_148679 23081 Hs.709425 NM_015061 ENSG00000107077 KDM4C GASC1|JHDM3C|JMJD2C|TDRD14C lysine demethylase 4C protein-coding chr9-938 chr9 112169454 112169698 + 7.11 0.000 intron (NM_022486, intron 1 of 16) intron (NM_022486, intron 1 of 16) 5721 NM_022486 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding chr2-1707 chr2 58527615 58527859 + 7.11 0.000 intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 6984 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA chr13-485 chr13 73970242 73970486 + 7.11 0.000 intron (NM_007249, intron 2 of 7) intron (NM_007249, intron 2 of 7) 163565 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding chrX-263 chrX 107202842 107203086 + 7.11 0.000 intron (NM_017681, intron 1 of 8) AluJb|SINE|Alu 3469 NR_033676 54830 Hs.163629 NM_017681 ENSG00000198088 NUP62CL - nucleoporin 62 C-terminal like protein-coding chr8-414 chr8 124381018 124381262 + 7.11 0.000 Intergenic AluSx|SINE|Alu -8441 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding chr18-141 chr18 55096462 55096706 + 7.11 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat 27722 NR_110743 101927229 Hs.638474 NR_110743 ENSG00000267013 LINC01929 - long intergenic non-protein coding RNA 1929 ncRNA chr8-531 chr8 136225651 136225895 + 7.11 0.000 Intergenic Intergenic -305025 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA chr3-1409 chr3 133591672 133591916 + 7.11 0.000 Intergenic AluSx1|SINE|Alu 17360 NM_001282764 55573 Hs.518265 NM_017548 ENSG00000091527 CDV3 H41 CDV3 homolog protein-coding chr12-1250 chr12 121765688 121765932 + 7.11 0.000 intron (NM_001080825, intron 6 of 11) intron (NM_001080825, intron 6 of 11) 27878 NM_019034 54509 Hs.707579 NM_019034 ENSG00000139725 RHOF ARHF|RIF ras homolog family member F, filopodia associated protein-coding chr16-458 chr16 89838044 89838288 + 7.11 0.000 intron (NM_032451, intron 1 of 14) intron (NM_032451, intron 1 of 14) 9691 NM_032451 84501 Hs.461786 NM_032451 ENSG00000204991 SPIRE2 Spir-2 spire type actin nucleation factor 2 protein-coding chr17-845 chr17 16991294 16991538 + 7.11 0.000 Intergenic (CA)n|Simple_repeat|Simple_repeat 3087 NR_146886 105371562 Hs.579259 NR_146886 ENSG00000230969 LINC02090 - long intergenic non-protein coding RNA 2090 ncRNA chr17-1478 chr17 82670249 82670493 + 7.11 0.000 intron (NM_006822, intron 1 of 5) AluSz6|SINE|Alu -2064 NR_039751 100616196 NR_039751 ENSG00000266107 MIR4525 - microRNA 4525 ncRNA chr2-1802 chr2 116708375 116708619 + 7.11 0.000 Intergenic AluSx1|SINE|Alu -1106194 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding chr9-1077 chr9 82174749 82174993 + 7.11 0.000 Intergenic AluY|SINE|Alu 186099 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding chr2-1382 chr2 219720645 219720889 + 7.11 0.000 Intergenic AluY|SINE|Alu 93137 NM_005070 6508 Hs.1176 NM_005070 ENSG00000114923 SLC4A3 AE3|CAE3/BAE3|SLC2C solute carrier family 4 member 3 protein-coding chr17-1412 chr17 76519059 76519303 + 7.11 0.000 Intergenic Intergenic -8405 NR_033357 768206 Hs.634380 NM_001077620 ENSG00000214140 PRCD RP36 photoreceptor disc component protein-coding chr21-247 chr21 42475601 42475845 + 7.11 0.000 intron (NM_080860, intron 8 of 8) intron (NM_080860, intron 8 of 8) 20501 NM_001286506 89765 Hs.661069 NM_080860 ENSG00000160188 RSPH1 CT79|RSP44|RSPH10A|TSA2|TSGA2 radial spoke head component 1 protein-coding chr1-1831 chr1 150137826 150138070 + 7.11 0.000 intron (NR_103998, intron 13 of 13) intron (NR_103998, intron 13 of 13) -11486 NM_001304722 51177 Hs.438824 NM_016274 ENSG00000023902 PLEKHO1 CKIP-1|CKIP1|JBP|OC120 pleckstrin homology domain containing O1 protein-coding chr4-647 chr4 1317287 1317531 + 7.11 0.000 intron (NR_123716, intron 3 of 6) intron (NR_123716, intron 3 of 6) 7618 NM_001297433 10296 Hs.139896 NM_005882 ENSG00000090316 MAEA EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5 macrophage erythroblast attacher protein-coding chr3-856 chr3 117175007 117175251 + 7.11 0.000 Intergenic AluSx|SINE|Alu 253698 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA chr1-1886 chr1 184110765 184111009 + 7.11 0.000 Intergenic Intergenic 59157 NM_052965 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding chr17-1388 chr17 71985129 71985373 + 7.11 0.000 Intergenic Intergenic 40728 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA chr9-1181 chr9 19233460 19233704 + 7.11 0.000 intron (NR_073201, intron 1 of 31) AluSx1|SINE|Alu 2889 NM_017925 55667 Hs.249591 NM_017925 ENSG00000137145 DENND4C C9orf55|C9orf55B|RAB10GEF|bA513M16.3 DENN domain containing 4C protein-coding chrX-547 chrX 131396247 131396491 + 7.11 0.000 Intergenic L2c|LINE|L2 -106940 NM_001170961 3547 Hs.22111 NM_001555 ENSG00000147255 IGSF1 CHTE|IGCD1|IGDC1|INHBP|PGSF2|p120 immunoglobulin superfamily member 1 protein-coding chr18-278 chr18 45883223 45883467 + 7.11 0.000 intron (NM_020964, intron 30 of 43) intron (NM_020964, intron 30 of 43) 57670 NM_213602 284266 Hs.287692 NM_213602 ENSG00000197046 SIGLEC15 CD33L3|HsT1361|SIGLEC-15 sialic acid binding Ig like lectin 15 protein-coding chr14-577 chr14 91419916 91420160 + 7.11 0.000 Intergenic AluY|SINE|Alu -2218 NM_001080414 440193 Hs.525536 NM_001080414 ENSG00000015133 CCDC88C DAPLE|HKRP2|HYC1|KIAA1509|SCA40 coiled-coil domain containing 88C protein-coding chr17-1208 chr17 1261652 1261896 + 7.11 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -8790 NM_001164405 727857 Hs.723790 NM_001164405 ENSG00000205899 BHLHA9 BHLHF42|CCSPD basic helix-loop-helix family member a9 protein-coding chr16-1041 chr16 2304259 2304503 + 7.11 0.000 intron (NM_001089, intron 11 of 32) intron (NM_001089, intron 11 of 32) 29761 NR_039868 100616241 NR_039868 ENSG00000264004 MIR4717 - microRNA 4717 ncRNA chr3-394 chr3 34634431 34634675 + 7.11 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 759470 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA chrX-268 chrX 132911068 132911312 + 7.11 0.000 intron (NM_001077188, intron 3 of 5) intron (NM_001077188, intron 3 of 5) 50180 NM_147175 90161 Hs.385956 NM_147175 ENSG00000171004 HS6ST2 MRXSPM heparan sulfate 6-O-sulfotransferase 2 protein-coding KI270736.1-11 KI270736.1 58630 58874 + 6.96 0.000 NA NA NA NA chr19-1482 chr19 5870041 5870285 + 6.96 0.000 intron (NM_002034, intron 1 of 1) intron (NM_002034, intron 1 of 1) 377 NM_002034 2527 Hs.631843 NM_002034 ENSG00000130383 FUT5 FUC-TV fucosyltransferase 5 protein-coding chr15-703 chr15 77959523 77959767 + 6.96 0.000 Intergenic Intergenic -15084 NR_157580 440292 NR_157580 LOC440292 - COMM domain containing 4 pseudogene pseudo chr9-1204 chr9 38324992 38325236 + 6.96 0.000 Intergenic SVA_F|Retroposon|SVA -67588 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding chr12-1163 chr12 75447022 75447266 + 6.96 0.000 Intergenic Intergenic -33611 NM_006851 11010 Hs.205558 NM_006851 ENSG00000139278 GLIPR1 CRISP7|GLIPR|RTVP1 GLI pathogenesis related 1 protein-coding chr14-174 chr14 71851956 71852200 + 6.96 0.000 Intergenic AluSx1|SINE|Alu -80093 NM_001370270 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding chr2-1122 chr2 134275444 134275688 + 6.96 0.000 intron (NM_001371457, intron 3 of 16) MER20|DNA|hAT-Charlie 21494 NM_002410 4249 Hs.4988 NM_002410 ENSG00000152127 MGAT5 GNT-V|GNT-VA|MGAT5A alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase protein-coding chr7-741 chr7 69039704 69039948 + 6.96 0.000 Intergenic AluJr|SINE|Alu 557798 NR_148926 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA chr5-666 chr5 80807064 80807308 + 6.96 0.000 intron (NM_002439, intron 19 of 23) AluJb|SINE|Alu -152203 NM_001290357 1719 Hs.592364 NM_000791 ENSG00000228716 DHFR DHFRP1|DYR dihydrofolate reductase protein-coding chr5-475 chr5 110805063 110805307 + 6.96 0.000 Intergenic AluY|SINE|Alu 66178 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding chr3-1150 chr3 126089961 126090205 + 6.96 0.000 intron (NM_001164475, intron 1 of 9) MER4B-int|LTR|ERV1 -5792 NM_001008486 54946 Hs.573007 NM_017836 ENSG00000114544 SLC41A3 SLC41A1-L2 solute carrier family 41 member 3 protein-coding chr10-730 chr10 33318887 33319131 + 6.96 0.000 intron (NM_001244973, intron 2 of 16) AluY|SINE|Alu 15658 NM_003873 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding chr4-618 chr4 140493135 140493379 + 6.96 0.000 intron (NM_001277353, intron 1 of 10) L1ME3F|LINE|L1 5036 NM_001277353 152586 Hs.189067 NM_001034840 ENSG00000205301 MGAT4D GnT1IP MGAT4 family member D protein-coding chr12-622 chr12 20321799 20322043 + 6.96 0.000 Intergenic Intergenic -47324 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding chrX-392 chrX 116895615 116895859 + 6.96 0.000 Intergenic AluY|SINE|Alu -77877 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA chr17-1217 chr17 3626580 3626824 + 6.96 0.000 intron (NM_013276, intron 2 of 6) AluSx1|SINE|Alu 9548 NM_013276 23729 Hs.579217 NM_013276 ENSG00000197417 SHPK CARKL|SHK sedoheptulokinase protein-coding chr22-509 chr22 40819400 40819644 + 6.96 0.000 promoter-TSS (NM_001282727) promoter-TSS (NM_001282727) -123 NM_001282727 10478 Hs.474938 NM_006358 ENSG00000100372 SLC25A17 PMP34 solute carrier family 25 member 17 protein-coding chr10-941 chr10 124769749 124769993 + 6.96 0.000 intron (NM_001304468, intron 4 of 5) AluSp|SINE|Alu 22016 NM_001304467 399818 Hs.720819 NM_212554 ENSG00000203791 EEF1AKMT2 C10orf138|Efm4|METTL10 EEF1A lysine methyltransferase 2 protein-coding chr7-1354 chr7 100666982 100667226 + 6.96 0.000 TTS (NR_133946) TTS (NR_133946) -6636 NM_005273 2783 Hs.185172 NM_005273 ENSG00000172354 GNB2 - G protein subunit beta 2 protein-coding chr7-1309 chr7 67541904 67542148 + 6.96 0.000 Intergenic AluJb|SINE|Alu 206050 NR_108104 101929736 Hs.634050 NR_108104 ENSG00000106610 LINC01372 - long intergenic non-protein coding RNA 1372 ncRNA chr2-1696 chr2 47683171 47683415 + 6.96 0.000 Intergenic AluSx|SINE|Alu -99789 NM_001281493 2956 Hs.445052 NM_000179 ENSG00000116062 MSH6 GTBP|GTMBP|HNPCC5|HSAP|p160 mutS homolog 6 protein-coding chr20-515 chr20 112905 113149 + 6.96 0.000 Intergenic AluSg|SINE|Alu 25355 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding chr12-1067 chr12 23424118 23424362 + 6.96 0.000 Intergenic Intergenic 160346 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding chr6-1064 chr6 126859189 126859433 + 6.96 0.000 Intergenic Intergenic -259360 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding chr19-1278 chr19 47574816 47575060 + 6.96 0.000 Intergenic L1MB8|LINE|L1 -1790 NM_001277075 84215 Hs.14161 NM_032255 ENSG00000118156 ZNF541 - zinc finger protein 541 protein-coding chr2-1719 chr2 65676775 65677019 + 6.96 0.000 Intergenic MER70A|LTR|ERVL -244298 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding chr5-527 chr5 32443954 32444198 + 6.96 0.000 intron (NM_016107, intron 2 of 19) CpG 664 NR_144318 51663 Hs.435231 NM_016107 ENSG00000056097 ZFR SPG71|ZFR1 zinc finger RNA binding protein protein-coding chr13-476 chr13 57129437 57129681 + 6.96 0.000 Intergenic AluY|SINE|Alu -11359 NM_198441 122183 Hs.525056 NM_198441 ENSG00000204919 PRR20A PRR20|PRR20B|PRR20C|PRR20D|PRR20E proline rich 20A protein-coding chr10-971 chr10 6628540 6628784 + 6.96 0.000 intron (NR_120634, intron 5 of 5) (CT)n|Simple_repeat|Simple_repeat -6408 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA chr13-459 chr13 43959103 43959347 + 6.96 0.000 Intergenic Intergenic -63110 NR_026955 121838 Hs.201441 NR_026955 LINC00284 NCRNA00284 long intergenic non-protein coding RNA 284 ncRNA chr1-1962 chr1 247093598 247093842 + 6.96 0.000 Intergenic AluSx3|SINE|Alu 10652 NM_024804 79862 Hs.163754 NM_024804 ENSG00000188295 ZNF669 - zinc finger protein 669 protein-coding chrX-389 chrX 107762687 107762931 + 6.96 0.000 intron (NM_198057, intron 1 of 2) intron (NM_198057, intron 1 of 2) 12978 NM_198057 1831 Hs.522074 NM_004089 ENSG00000157514 TSC22D3 DIP|DSIPI|GILZ|TSC-22R TSC22 domain family member 3 protein-coding chr10-718 chr10 7915528 7915772 + 6.96 0.000 intron (NM_031923, intron 2 of 6) AluYg6|SINE|Alu 97145 NM_031923 83860 Hs.527688 NM_031923 ENSG00000165632 TAF3 TAF140|TAFII-140|TAFII140 TATA-box binding protein associated factor 3 protein-coding chr4-955 chr4 40613697 40613941 + 6.96 0.000 intron (NM_001371114, intron 1 of 5) intron (NM_001371114, intron 1 of 5) 16045 NM_001098634 54502 Hs.518727 NM_019027 ENSG00000163694 RBM47 NET18 RNA binding motif protein 47 protein-coding chr19-1543 chr19 17599909 17600153 + 6.96 0.000 Intergenic MamGypLTR2b|LTR|Gypsy 44382 NM_024656 79709 Hs.418795 NM_024656 ENSG00000130309 COLGALT1 BSVD3|ColGalT 1|GLT25D1 collagen beta(1-O)galactosyltransferase 1 protein-coding chr10-706 chr10 132946516 132946760 + 6.96 0.000 intron (NR_120627, intron 1 of 1) (CCCAGCAT)n|Simple_repeat|Simple_repeat 658 NR_120626 101927590 Hs.448598 NR_120626 ENSG00000232903 LINC01166 - long intergenic non-protein coding RNA 1166 ncRNA chrX-571 chrX 154138304 154138548 + 6.96 0.000 Intergenic AluSx|SINE|Alu -5817 NM_020061 5956 Hs.247787 NM_020061 ENSG00000102076 OPN1LW CBBM|CBP|COD5|RCP|ROP opsin 1, long wave sensitive protein-coding chr10-1102 chr10 21527093 21527337 + 6.96 0.000 Intergenic CpG -1533 NM_207371 387640 Hs.350848 NM_207371 ENSG00000180592 SKIDA1 C10orf140|DLN-1 SKI/DACH domain containing 1 protein-coding chr15-563 chr15 58023591 58023835 + 6.96 0.000 intron (NM_170696, intron 1 of 11) L1MA4A|LINE|L1 -9690 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding chr4-975 chr4 53196513 53196757 + 6.96 0.000 intron (NM_152540, intron 4 of 8) intron (NM_152540, intron 4 of 8) 169426 NM_152540 152579 Hs.302287 NM_152540 ENSG00000184178 SCFD2 STXBP1L1 sec1 family domain containing 2 protein-coding chr9-777 chr9 36615241 36615485 + 6.96 0.000 intron (NM_001256691, intron 6 of 15) SVA_F|Retroposon|SVA 42468 NM_014791 9833 Hs.184339 NM_014791 ENSG00000165304 MELK HPK38 maternal embryonic leucine zipper kinase protein-coding chr17-813 chr17 79060833 79061077 + 6.96 0.000 Intergenic Tigger1|DNA|TcMar-Tigger -13982 NM_001042573 64772 Hs.29288 NM_022759 ENSG00000167280 ENGASE - endo-beta-N-acetylglucosaminidase protein-coding chr1-2305 chr1 26725706 26725950 + 6.96 0.000 intron (NM_139135, intron 1 of 19) intron (NM_139135, intron 1 of 19) 29813 NM_006015 8289 Hs.468972 NM_006015 ENSG00000117713 ARID1A B120|BAF250|BAF250a|BM029|C1orf4|CSS2|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1 AT-rich interaction domain 1A protein-coding chr1-2353 chr1 40580680 40580924 + 6.96 0.000 Intergenic AluSq10|SINE|Alu 49165 NM_152373 127396 Hs.524767 NM_152373 ENSG00000117010 ZNF684 - zinc finger protein 684 protein-coding chr9-273 chr9 69606373 69606617 + 6.96 0.000 intron (NM_001163, intron 1 of 12) AluYm1|SINE|Alu 65876 NM_001163 320 Hs.171939 NM_001163 ENSG00000107282 APBA1 D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA amyloid beta precursor protein binding family A member 1 protein-coding chr19-1398 chr19 53499323 53499567 + 6.96 0.000 Intergenic MLT1E2|LTR|ERVL-MaLR -21569 NM_018555 55422 Hs.185674 NM_018555 ENSG00000130844 ZNF331 RITA|ZNF361|ZNF463 zinc finger protein 331 protein-coding chr10-899 chr10 99994935 99995179 + 6.96 0.000 intron (NM_015221, intron 1 of 16) AluJb|SINE|Alu 14890 NM_015221 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding chr8-974 chr8 133463831 133464075 + 6.96 0.000 intron (NM_003033, intron 6 of 8) intron (NM_003033, intron 6 of 8) 107934 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding chr19-1156 chr19 2586828 2587072 + 6.96 0.000 intron (NM_052847, intron 2 of 4) AluSz|SINE|Alu -43765 NR_107004 102465838 NR_107004 ENSG00000277904 MIR7850 hsa-mir-7850 microRNA 7850 ncRNA chr12-980 chr12 74703860 74704104 + 6.80 0.000 Intergenic (TA)n|Simple_repeat|Simple_repeat 166147 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding chr6-621 chr6 119808130 119808374 + 6.80 0.000 intron (NR_134600, intron 2 of 3) AluSz|SINE|Alu -206927 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA chr5-882 chr5 59175301 59175545 + 6.80 0.000 intron (NM_001364602, intron 5 of 5) intron (NM_001364602, intron 5 of 5) 100692 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding chr19-1041 chr19 1691322 1691566 + 6.80 0.000 Intergenic Intergenic -38829 NM_003200 6929 Hs.371282 NM_003200 ENSG00000071564 TCF3 AGM8|E2A|E47|ITF1|TCF-3|VDIR|bHLHb21|p75 transcription factor 3 protein-coding chr18-340 chr18 53281566 53281810 + 6.80 0.000 intron (NM_005215, intron 12 of 28) MER63A|DNA|hAT-Blackjack 44587 NR_130465 100616232 NR_130465 ENSG00000263872 MIR4528 - microRNA 4528 ncRNA chr16-1167 chr16 70051533 70051777 + 6.80 0.000 intron (NR_003610, intron 1 of 25) SVA_E|Retroposon|SVA 14293 NR_003610 283970 Hs.513695 NM_199134 ENSG00000196696 PDXDC2P-NPIPB14P - nuclear pore complex-interacting protein pseudo chr4-1045 chr4 108587754 108587998 + 6.80 0.000 intron (NR_026968, intron 1 of 3) AluSx1|SINE|Alu 30643 NR_134679 101929621 Hs.679455 NR_134679 LOC101929621 - uncharacterized LOC101929621 ncRNA chr2-1466 chr2 44717748 44717992 + 6.80 0.000 intron (NM_024766, intron 7 of 10) intron (NM_024766, intron 7 of 10) 221018 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA chr7-1320 chr7 75777603 75777847 + 6.80 0.000 intron (NM_006072, intron 1 of 3) AluJo|SINE|Alu 12021 NM_006072 10344 Hs.131342 NM_006072 ENSG00000006606 CCL26 IMAC|MIP-4a|MIP-4alpha|SCYA26|TSC-1 C-C motif chemokine ligand 26 protein-coding chr19-965 chr19 18117993 18118237 + 6.80 0.000 intron (NM_015016, intron 2 of 26) CpG -19299 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr7-522 chr7 98811286 98811530 + 6.80 0.000 Intergenic (TGG)n|Simple_repeat|Simple_repeat 58606 NM_001134450 222865 Hs.270753 NM_152913 ENSG00000166448 TMEM130 - transmembrane protein 130 protein-coding chr14-776 chr14 98710582 98710826 + 6.80 0.000 promoter-TSS (NR_161367) promoter-TSS (NR_161367) -909 NR_161367 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA chr2-698 chr2 169519527 169519771 + 6.80 0.000 intron (NM_006063, intron 4 of 5) intron (NM_006063, intron 4 of 5) 9947 NM_006063 10324 Hs.50550 NM_006063 ENSG00000239474 KLHL41 KBTBD10|Krp1|SARCOSIN kelch like family member 41 protein-coding chr19-1546 chr19 18110001 18110245 + 6.80 0.000 intron (NM_015016, intron 2 of 26) CpG -11307 NM_001290024 3594 Hs.567294 NM_005535 ENSG00000096996 IL12RB1 CD212|IL-12R-BETA1|IL12RB|IMD30 interleukin 12 receptor subunit beta 1 protein-coding chr1-1040 chr1 65075986 65076230 + 6.80 0.000 Intergenic AluJb|SINE|Alu -8362 NM_001321854 3716 Hs.207538 NM_002227 ENSG00000162434 JAK1 JAK1A|JAK1B|JTK3 Janus kinase 1 protein-coding chr4-721 chr4 96352243 96352487 + 6.80 0.000 intron (NR_147149, intron 1 of 3) intron (NR_147149, intron 1 of 3) 41662 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA chr10-727 chr10 30031283 30031527 + 6.80 0.000 intron (NM_020848, intron 2 of 3) AluJr|SINE|Alu 28181 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding chr14-780 chr14 99756291 99756535 + 6.80 0.000 Intergenic Intergenic -37000 NM_001008707 2009 Hs.12451 NM_004434 ENSG00000066629 EML1 BH|ELP79|EMAP|EMAPL|HuEMAP EMAP like 1 protein-coding chr16-1163 chr16 69017792 69018036 + 6.80 0.000 intron (NM_024562, intron 15 of 17) AluSq2|SINE|Alu -87739 NM_001199280 3038 Hs.592069 NM_005329 ENSG00000103044 HAS3 - hyaluronan synthase 3 protein-coding chr16-1179 chr16 78228126 78228370 + 6.80 0.000 intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 128594 NR_120436 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding chr14-669 chr14 101934185 101934429 + 6.80 0.000 Intergenic AluSx1|SINE|Alu -30266 NM_001376 1778 Hs.614080 NM_001376 ENSG00000197102 DYNC1H1 CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22 dynein cytoplasmic 1 heavy chain 1 protein-coding chr1-2469 chr1 107108260 107108504 + 6.80 0.000 Intergenic Intergenic -31706 NM_014917 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding chr9-1416 chr9 136555684 136555928 + 6.80 0.000 Intergenic AluSq2|SINE|Alu 7964 NR_121577 101928483 Hs.170035 NR_121577 NALT1 LINC01573|MIR4674HG|NALT|TCONS_l2_00029132 NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1 ncRNA chr5-1180 chr5 173857427 173857671 + 6.80 0.000 Intergenic Intergenic -30800 NM_001308189 80315 Hs.127126 NM_030627 ENSG00000113742 CPEB4 CPE-BP4|hCPEB-4 cytoplasmic polyadenylation element binding protein 4 protein-coding chr1-1586 chr1 222113694 222113938 + 6.80 0.000 Intergenic L2a|LINE|L2 -135296 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA chr1-2296 chr1 24735946 24736190 + 6.80 0.000 Intergenic Intergenic -9379 NM_013943 25932 Hs.440544 NM_013943 ENSG00000169504 CLIC4 CLIC4L|H1|MTCLIC|huH1|p64H1 chloride intracellular channel 4 protein-coding chr13-164 chr13 20229185 20229429 + 6.80 0.000 intron (NM_001370092, intron 4 of 4) AluSz6|SINE|Alu 1926 NM_006783 10804 Hs.511757 NM_006783 ENSG00000121742 GJB6 CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2 gap junction protein beta 6 protein-coding chr22-555 chr22 17720545 17720789 + 6.65 0.000 intron (NM_001270733, intron 1 of 1) AluJb|SINE|Alu 14009 NM_001270733 23786 Hs.631672 NM_015367 ENSG00000099968 BCL2L13 BCL-RAMBO|Bcl2-L-13|MIL1 BCL2 like 13 protein-coding chr6-529 chr6 73411042 73411286 + 6.65 0.000 intron (NM_018665, intron 10 of 16) AluY|SINE|Alu 16336 NM_018665 55510 Hs.125507 NM_018665 ENSG00000080007 DDX43 CT13|HAGE DEAD-box helicase 43 protein-coding chr9-546 chr9 130070961 130071205 + 6.65 0.000 intron (NM_020960, intron 1 of 17) AluJb|SINE|Alu 17177 NM_001136557 57720 Hs.512461 NM_020960 ENSG00000148358 GPR107 GCDRP|LUSTR1|bA138E2.2 G protein-coupled receptor 107 protein-coding chr9-1299 chr9 116619509 116619753 + 6.65 0.000 intron (NM_014010, intron 17 of 21) AluJr|SINE|Alu 67584 NM_198186 23245 Hs.601562 NM_014010 ENSG00000148219 ASTN2 bA67K19.1 astrotactin 2 protein-coding chr1-2048 chr1 70257428 70257672 + 6.65 0.000 Intergenic AluY|SINE|Alu 36170 NM_001350612 9295 Hs.479693 NM_004768 ENSG00000116754 SRSF11 NET2|SFRS11|dJ677H15.2|p54 serine and arginine rich splicing factor 11 protein-coding chr2-1153 chr2 216582264 216582508 + 6.65 0.000 Intergenic AluSx3|SINE|Alu 24552 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA chr13-356 chr13 98615801 98616045 + 6.65 0.000 Intergenic AluSp|SINE|Alu 38668 NR_046542 100874069 Hs.594160 NR_046542 STK24-AS1 - STK24 antisense RNA 1 ncRNA chr17-350 chr17 66951197 66951441 + 6.65 0.000 Intergenic FRAM|SINE|Alu -13388 NM_014405 27092 Hs.514423 NM_014405 ENSG00000075461 CACNG4 - calcium voltage-gated channel auxiliary subunit gamma 4 protein-coding chr10-1283 chr10 113187316 113187560 + 6.65 0.000 Intergenic Intergenic 58167 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding chr12-1225 chr12 111957424 111957668 + 6.65 0.000 intron (NM_138341, intron 3 of 9) SVA_B|Retroposon|SVA 55619 NM_001193531 89894 Hs.506815 NM_138341 ENSG00000198270 TMEM116 - transmembrane protein 116 protein-coding chr10-1196 chr10 76237597 76237841 + 6.65 0.000 intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 454958 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding chr14-432 chr14 81499775 81500019 + 6.65 0.000 intron (NM_005065, intron 6 of 20) intron (NM_005065, intron 6 of 20) 33956 NM_005065 6400 Hs.181300 NM_005065 ENSG00000071537 SEL1L Hrd3|PRO1063|SEL1-LIKE|SEL1L1 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase protein-coding chrX-102 chrX 101406085 101406329 + 6.65 0.000 intron (NM_000169, intron 1 of 6) AluY|SINE|Alu 1806 NM_000169 2717 Hs.69089 NM_000169 ENSG00000102393 GLA GALA galactosidase alpha protein-coding chr7-1390 chr7 118110433 118110677 + 6.65 0.000 Intergenic Intergenic -73609 NM_016200 51691 Hs.655046 NM_016200 ENSG00000128534 LSM8 NAA38 LSM8 homolog, U6 small nuclear RNA associated protein-coding chr2-1778 chr2 101273246 101273490 + 6.65 0.000 promoter-TSS (NR_003070) promoter-TSS (NR_003070) -319 NR_003070 692205 Hs.656503 NR_003070 ENSG00000212283 SNORD89 HBII-289 small nucleolar RNA, C/D box 89 snoRNA chr15-548 chr15 43014735 43014979 + 6.65 0.000 intron (NM_174916, intron 29 of 46) SVA_D|Retroposon|SVA 91181 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding chrX-287 chrX 33468654 33468898 + 6.65 0.000 Intergenic AluSc|SINE|Alu -129388 NM_000109 1756 Hs.495912 NM_000109 ENSG00000198947 DMD BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85 dystrophin protein-coding chr8-906 chr8 86694159 86694403 + 6.65 0.000 intron (NM_019098, intron 3 of 17) SVA_D|Retroposon|SVA 49394 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding chr7-1395 chr7 122938917 122939161 + 6.65 0.000 Intergenic AluJo|SINE|Alu -52280 NM_001167940 93664 Hs.649459 NM_017954 ENSG00000081803 CADPS2 CAPS2 calcium dependent secretion activator 2 protein-coding chr17-1252 chr17 16387578 16387822 + 6.65 0.000 Intergenic AluSq2|SINE|Alu 6235 NM_001281717 7314 Hs.356190 NM_018955 ENSG00000170315 UBB HEL-S-50 ubiquitin B protein-coding chr2-460 chr2 150980570 150980814 + 6.65 0.000 Intergenic (A)n|Simple_repeat|Simple_repeat 281171 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding chr2-1699 chr2 51938921 51939165 + 6.65 0.000 intron (NR_135237, intron 7 of 10) L1HS|LINE|L1 -431605 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA chr14-657 chr14 90232851 90233095 + 6.65 0.000 Intergenic AluSx|SINE|Alu -23580 NM_002802 5700 Hs.356654 NM_002802 ENSG00000100764 PSMC1 P26S4|S4|p56 proteasome 26S subunit, ATPase 1 protein-coding chr3-1469 chr3 174892761 174893005 + 6.65 0.000 intron (NM_207015, intron 1 of 13) AluSx3|SINE|Alu 33549 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding chr3-886 chr3 158719138 158719382 + 6.65 0.000 intron (NM_206963, intron 1 of 5) intron (NM_206963, intron 1 of 5) 13197 NM_206963 5918 Hs.131269 NM_002888 ENSG00000118849 RARRES1 LXNL|PERG-1|TIG1 retinoic acid receptor responder 1 protein-coding chr17-433 chr17 1902940 1903184 + 6.65 0.000 Intergenic AluSp|SINE|Alu 73057 NM_001355120 6117 Hs.461925 NM_002945 ENSG00000132383 RPA1 HSSB|MST075|REPA1|RF-A|RP-A|RPA70 replication protein A1 protein-coding chr2-1831 chr2 140803063 140803307 + 6.65 0.000 intron (NM_018557, intron 32 of 90) intron (NM_018557, intron 32 of 90) -216500 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA chr2-1686 chr2 46079031 46079275 + 6.65 0.000 intron (NM_005400, intron 10 of 14) AluSc|SINE|Alu -218254 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding chr11-1482 chr11 47017558 47017802 + 6.65 0.000 intron (NR_103472, intron 2 of 7) AluSz6|SINE|Alu 80919 NM_001003678 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding chr6-678 chr6 42211552 42211796 + 6.65 0.000 intron (NM_018141, intron 4 of 6) AluSx3|SINE|Alu 6187 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding chr3-1423 chr3 138693995 138694239 + 6.65 0.000 intron (NM_006219, intron 14 of 23) MER68|LTR|ERVL 13504 NM_001256045 5291 Hs.239818 NM_006219 ENSG00000051382 PIK3CB P110BETA|PI3K|PI3KBETA|PIK3C1 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta protein-coding chrY-22 chrY 10964572 10964816 + 6.65 0.000 Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 1053896 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr2-1512 chr2 130301716 130301960 + 6.65 0.000 Intergenic REP522|Satellite|telo 40270 NM_001321119 84317 Hs.104203 NM_032357 ENSG00000136710 CCDC115 CDG2O|ccp1 coiled-coil domain containing 115 protein-coding chr4-414 chr4 55116297 55116541 + 6.65 0.000 intron (NM_002253, intron 3 of 29) AluSq|SINE|Alu 9176 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding chr4-987 chr4 57466666 57466910 + 6.65 0.000 TTS (NR_125907) TTS (NR_125907) 40916 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA chr17-1098 chr17 2118958 2119202 + 6.65 0.000 intron (NM_001256827, intron 6 of 11) AluSc8|SINE|Alu -30319 NM_001282326 23293 Hs.448342 NM_017575 ENSG00000070366 SMG6 C17orf31|EST1A|SMG-6|hSMG5/7a SMG6 nonsense mediated mRNA decay factor protein-coding chr18-335 chr18 45924005 45924249 + 6.65 0.000 intron (NM_020964, intron 14 of 43) intron (NM_020964, intron 14 of 43) 43202 NM_020964 57724 Hs.514843 NM_020964 ENSG00000152223 EPG5 HEEW1|KIAA1632|VICIS ectopic P-granules autophagy protein 5 homolog protein-coding chr1-1219 chr1 205067857 205068101 + 6.65 0.000 intron (NM_001346083, intron 16 of 22) intron (NM_001346083, intron 16 of 22) 16481 NM_203376 388730 Hs.146928 NM_203376 ENSG00000174529 TMEM81 HC3107|KVLA2788|UNQ2788 transmembrane protein 81 protein-coding chr14-497 chr14 102046006 102046250 + 6.65 0.000 intron (NM_001376, intron 72 of 77) AluYm1|SINE|Alu 40916 NM_005348 3320 Hs.525600 NM_005348 ENSG00000080824 HSP90AA1 EL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2 heat shock protein 90 alpha family class A member 1 protein-coding chr6-949 chr6 34946924 34947168 + 6.65 0.000 intron (NM_015245, intron 1 of 23) intron (NM_015245, intron 1 of 23) 57791 NM_015245 23294 Hs.656492 NM_015245 ENSG00000064999 ANKS1A ANKS1 ankyrin repeat and sterile alpha motif domain containing 1A protein-coding chr17-1242 chr17 10580365 10580609 + 6.65 0.000 intron (NR_125367, intron 3 of 10) intron (NR_125367, intron 3 of 10) -30829 NM_017534 4620 Hs.667534 NM_017534 ENSG00000125414 MYH2 IBM3|MYH2A|MYHSA2|MYHas8|MYPOP|MyHC-2A|MyHC-IIa myosin heavy chain 2 protein-coding chr17-791 chr17 58012500 58012744 + 6.65 0.000 Intergenic HSMAR2|DNA|TcMar-Mariner -5276 NR_034041 6426 Hs.68714 NM_006924 ENSG00000136450 SRSF1 ASF|SF2|SF2p33|SFRS1|SRp30a serine and arginine rich splicing factor 1 protein-coding chr4-973 chr4 52465184 52465428 + 6.65 0.000 Intergenic SVA_F|Retroposon|SVA 191233 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding chr2-780 chr2 165188705 165188949 + 6.65 0.000 intron (NM_006922, intron 1 of 27) AluSg|SINE|Alu 15223 NM_001081677 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding chr1-2102 chr1 200596701 200596945 + 6.65 0.000 intron (NM_014875, intron 14 of 29) AluSx1|SINE|Alu 22015 NM_001305792 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding chr19-945 chr19 12602508 12602752 + 6.65 0.000 intron (NM_020714, intron 2 of 4) AluJb|SINE|Alu 8183 NM_020714 57474 Hs.655860 NM_020714 ENSG00000188033 ZNF490 - zinc finger protein 490 protein-coding chr12-461 chr12 8136433 8136677 + 6.50 0.000 intron (NM_194447, intron 3 of 4) AluSz|SINE|Alu -1703 NR_036440 642559 Hs.646545 NR_036440 ENSG00000235602 POU5F1P3 OCT3|OCT4|OCT4-pg3|OTF-3|OTF3|OTF3L|Oct-3|Oct-4|POU5F1|POU5F1L|POU5FLC12 POU class 5 homeobox 1 pseudogene 3 pseudo chr1-1478 chr1 7990319 7990563 + 6.50 0.000 Intergenic (CATCAC)n|Simple_repeat|Simple_repeat 28730 NM_007262 11315 Hs.419640 NM_007262 ENSG00000116288 PARK7 DJ-1|DJ1|GATD2|HEL-S-67p Parkinsonism associated deglycase protein-coding chr5-902 chr5 86082864 86083108 + 6.50 0.000 Intergenic AluY|SINE|Alu -199458 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo chr1-2043 chr1 62218754 62218998 + 6.50 0.000 Intergenic L1MB2|LINE|L1 24027 NM_019079 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding chr16-267 chr16 81207605 81207849 + 6.50 0.000 intron (NM_001076780, intron 4 of 17) intron (NM_001076780, intron 4 of 17) 12667 NM_001076780 114780 Hs.413525 NM_052892 ENSG00000166473 PKD1L2 PC1L2 polycystin 1 like 2 (gene/pseudogene) protein-coding chr2-727 chr2 17018621 17018865 + 6.50 0.000 Intergenic AluYe5|SINE|Alu -352909 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding chr3-1202 chr3 2584536 2584780 + 6.50 0.000 intron (NM_175607, intron 4 of 24) AluSq2|SINE|Alu -307557 NM_001206956 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding chr18-97 chr18 1003758 1004002 + 6.50 0.000 Intergenic MSTB|LTR|ERVL-MaLR -75887 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA chr18-293 chr18 5296082 5296326 + 6.50 0.000 promoter-TSS (NM_001143823) promoter-TSS (NM_001143823) -184 NM_003409 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding chr3-1417 chr3 136911977 136912221 + 6.50 0.000 intron (NM_001291999, intron 1 of 3) L1M4c|LINE|L1 -18403 NM_001190796 4690 Hs.126889 NM_006153 ENSG00000158092 NCK1 NCK|NCKalpha|nck-1 NCK adaptor protein 1 protein-coding chr3-685 chr3 182181557 182181801 + 6.50 0.000 Intergenic Intergenic 229315 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA chr3-1416 chr3 136723295 136723539 + 6.50 0.000 intron (NM_005862, intron 1 of 33) SVA_D|Retroposon|SVA 28961 NM_005862 10274 Hs.412586 NM_005862 ENSG00000118007 STAG1 MRD47|SA1|SCC3A stromal antigen 1 protein-coding chr1-1960 chr1 245018100 245018344 + 6.50 0.000 intron (NM_032328, intron 3 of 7) AluSx1|SINE|Alu -47353 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA chr19-1180 chr19 6936420 6936664 + 6.50 0.000 intron (NM_001974, intron 18 of 20) L1MB4|LINE|L1 48963 NM_001256252 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr17-445 chr17 40051004 40051248 + 6.50 0.000 intron (NR_052017, intron 3 of 24) AluSp|SINE|Alu 3282 NM_001330211 9862 Hs.462983 NM_014815 ENSG00000008838 MED24 ARC100|CRSP100|CRSP4|DRIP100|MED5|THRAP4|TRAP100 mediator complex subunit 24 protein-coding chr4-1036 chr4 99086756 99087000 + 6.50 0.000 intron (NM_000671, intron 1 of 8) AluYf1|SINE|Alu 1910 NM_000671 128 Hs.78989 NM_000671 ENSG00000197894 ADH5 ADH-3|ADHX|FALDH|FDH|GSH-FDH|GSNOR|HEL-S-60p alcohol dehydrogenase 5 (class III), chi polypeptide protein-coding chr9-930 chr9 100068393 100068637 + 6.50 0.000 intron (NM_015051, intron 1 of 11) SVA_D|Retroposon|SVA 30485 NM_015051 23071 Hs.154023 NM_015051 ENSG00000023318 ERP44 PDIA10|TXNDC4 endoplasmic reticulum protein 44 protein-coding chr16-1105 chr16 31150956 31151200 + 6.50 0.000 Intergenic AluJr|SINE|Alu -1012 NM_173502 146547 Hs.256632 NM_173502 ENSG00000178226 PRSS36 - serine protease 36 protein-coding chrY-21 chrY 26638126 26638370 + 6.50 0.000 Intergenic (AATGG)n|Simple_repeat|Simple_repeat 909758 NR_001524 114760 Hs.511777 NR_001524 ENSG00000231141 TTTY3 LINC00121|NCRNA00121|TTTY3A|TTY3 testis-specific transcript, Y-linked 3 ncRNA chr8-892 chr8 71254187 71254431 + 6.50 0.000 intron (NM_001370335, intron 14 of 20) L1MC5|LINE|L1 102397 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding chr6-763 chr6 161756342 161756586 + 6.50 0.000 intron (NM_004562, intron 7 of 11) AluSz|SINE|Alu 285487 NR_134594 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA chr11-1158 chr11 68816745 68816989 + 6.50 0.000 intron (NM_001031847, intron 1 of 18) (GT)n|Simple_repeat|Simple_repeat 25049 NM_001876 1374 Hs.503043 NM_001876 ENSG00000110090 CPT1A CPT1|CPT1-L|L-CPT1 carnitine palmitoyltransferase 1A protein-coding chr4-681 chr4 27365610 27365854 + 6.50 0.000 Intergenic AluSx3|SINE|Alu 148253 NR_125921 101929199 Hs.570815 NR_125921 ENSG00000249699 LINC02261 - long intergenic non-protein coding RNA 2261 ncRNA chr16-629 chr16 8813848 8814092 + 6.50 0.000 intron (NM_000303, intron 7 of 7) AluSz6|SINE|Alu 16131 NM_000303 5373 Hs.625732 NM_000303 ENSG00000140650 PMM2 CDG1|CDG1a|CDGS|PMI|PMI1|PMM 2 phosphomannomutase 2 protein-coding chr9-1141 chr9 135482805 135483049 + 6.50 0.000 intron (NM_014811, intron 2 of 3) intron (NM_014811, intron 2 of 3) 3145 NM_014811 9858 Hs.533260 NM_014811 ENSG00000196422 PPP1R26 KIAA0649|NRBE3 protein phosphatase 1 regulatory subunit 26 protein-coding chrX-372 chrX 46878881 46879125 + 6.50 0.000 intron (NM_006915, intron 4 of 4) AluJo|SINE|Alu 20701 NR_046101 724087 Hs.679235 NR_046101 ENSG00000204904 LINC01545 CXorf31 long intergenic non-protein coding RNA 1545 ncRNA chr17-985 chr17 44857712 44857956 + 6.50 0.000 intron (NM_001142605, intron 18 of 26) intron (NM_001142605, intron 18 of 26) 9951 NR_073504 51751 Hs.151787 NM_016438 ENSG00000131097 HIGD1B CLST11240|CLST11240-15 HIG1 hypoxia inducible domain family member 1B protein-coding chr7-1132 chr7 98099383 98099627 + 6.50 0.000 Intergenic AluSz6|SINE|Alu -7357 NM_014916 22853 Hs.444179 NM_014916 ENSG00000164715 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK lemur tyrosine kinase 2 protein-coding chr19-1066 chr19 7242984 7243228 + 6.50 0.000 intron (NM_001079817, intron 2 of 20) intron (NM_001079817, intron 2 of 20) 51308 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr4-984 chr4 56651928 56652172 + 6.50 0.000 intron (NM_001145460, intron 3 of 4) intron (NM_001145460, intron 3 of 4) 4472 NM_001145459 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding chr3-737 chr3 57525608 57525852 + 6.50 0.000 intron (NM_198564, intron 2 of 11) L1MA2|LINE|L1 18614 NM_198564 201625 Hs.201378 NM_178504 ENSG00000174844 DNAH12 DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19 dynein axonemal heavy chain 12 protein-coding chr3-493 chr3 123221287 123221531 + 6.50 0.000 intron (NM_012430, intron 2 of 6) AluSz|SINE|Alu 19466 NM_012430 26984 Hs.477361 NM_012430 ENSG00000121542 SEC22A SEC22L2 SEC22 homolog A, vesicle trafficking protein protein-coding chr20-269 chr20 36284582 36284826 + 6.35 0.000 Intergenic AluJb|SINE|Alu -21635 NM_001365621 22839 Hs.249600 NM_014902 ENSG00000080845 DLGAP4 DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4 DLG associated protein 4 protein-coding chr12-958 chr12 49569222 49569466 + 6.35 0.000 Intergenic AluSx3|SINE|Alu -1199 NM_001278341 10445 Hs.25313 NM_006337 ENSG00000187778 MCRS1 ICP22BP|INO80Q|MCRS2|MSP58|P78 microspherule protein 1 protein-coding chr2-1486 chr2 77864900 77865144 + 6.35 0.000 intron (NR_110288, intron 2 of 3) AluYi6|SINE|Alu -50912 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA chr4-957 chr4 41092566 41092810 + 6.35 0.000 intron (NM_173075, intron 3 of 16) AluSx|SINE|Alu 121854 NM_004307 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding chr5-918 chr5 124762569 124762813 + 6.35 0.000 Intergenic Intergenic -17579 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding chr15-553 chr15 45573067 45573311 + 6.35 0.000 Intergenic AluSz|SINE|Alu -13934 NR_132353 26258 Hs.7037 NM_012388 ENSG00000104164 BLOC1S6 BLOS6|HPS9|PA|PALLID|PLDN biogenesis of lysosomal organelles complex 1 subunit 6 protein-coding chr5-752 chr5 68995127 68995371 + 6.35 0.000 intron (NR_130778, intron 1 of 3) intron (NR_130778, intron 1 of 3) 34678 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA chr12-676 chr12 95376538 95376782 + 6.35 0.000 Intergenic AluSx|SINE|Alu 66737 NR_037456 100500802 NR_037456 ENSG00000265917 MIR3685 - microRNA 3685 ncRNA chr17-969 chr17 42107757 42108001 + 6.35 0.000 intron (NM_024119, intron 7 of 13) CpG-11145 4835 NM_024119 79132 Hs.55918 NM_024119 ENSG00000108771 DHX58 D11LGP2|D11lgp2e|LGP2|RLR-3 DExH-box helicase 58 protein-coding chr1-1188 chr1 113995053 113995297 + 6.35 0.000 Intergenic AluSz|SINE|Alu 15701 NM_020190 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding chr1-1871 chr1 170231571 170231815 + 6.35 0.000 intron (NR_146891, intron 2 of 4) AluSq|SINE|Alu 52515 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA chr13-187 chr13 95332994 95333238 + 6.35 0.000 Intergenic AluY|SINE|Alu -31665 NM_001105515 10257 Hs.508423 NM_005845 ENSG00000125257 ABCC4 MOAT-B|MOATB|MRP4 ATP binding cassette subfamily C member 4 protein-coding chr4-563 chr4 169612582 169612826 + 6.35 0.000 promoter-TSS (NM_001199398) promoter-TSS (NM_001199398) -121 NM_001199398 4750 Hs.481181 NM_012224 ENSG00000137601 NEK1 ALS24|NY-REN-55|SRPS2|SRPS2A|SRTD6 NIMA related kinase 1 protein-coding chr10-1016 chr10 74677933 74678177 + 6.35 0.000 intron (NM_001369124, intron 9 of 9) AluJr|SINE|Alu -147200 NM_001370139 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding chr12-976 chr12 66369303 66369547 + 6.35 0.000 intron (NM_001366722, intron 23 of 24) intron (NM_001366722, intron 23 of 24) 66880 NM_033647 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding chr8-571 chr8 96564964 96565208 + 6.35 0.000 intron (NM_002998, intron 1 of 4) AluSc|SINE|Alu 71273 NM_002998 6383 Hs.1501 NM_002998 ENSG00000169439 SDC2 CD362|HSPG|HSPG1|SYND2 syndecan 2 protein-coding chr15-556 chr15 47132594 47132838 + 6.35 0.000 Intergenic SVA_D|Retroposon|SVA -51373 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding chr17-680 chr17 9286569 9286813 + 6.35 0.000 intron (NM_004853, intron 7 of 7) (A)n|Simple_repeat|Simple_repeat -107573 NR_110828 101928266 Hs.639880 NR_110828 ENSG00000262966 LOC101928266 - uncharacterized LOC101928266 ncRNA chr6-709 chr6 107018019 107018263 + 6.35 0.000 Intergenic AluSx|SINE|Alu -10058 NM_001142470 51250 Hs.486084 NM_016487 ENSG00000130349 C6orf203 HSPC230|PRED31 chromosome 6 open reading frame 203 protein-coding chr6-1035 chr6 100011368 100011612 + 6.35 0.000 intron (NR_038384, intron 2 of 2) intron (NR_038384, intron 2 of 2) -17252 NM_032503 84539 Hs.591342 NM_032503 ENSG00000152034 MCHR2 GPR145|GPRv17|MCH-2R|MCH-R2|MCH2|MCH2R|MCHR-2|SLT melanin concentrating hormone receptor 2 protein-coding chr1-2236 chr1 11974093 11974337 + 6.35 0.000 intron (NM_001316320, intron 19 of 19) AluSx|SINE|Alu -5966 NM_014874 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr16-733 chr16 68095236 68095480 + 6.35 0.000 intron (NM_004555, intron 1 of 10) AluSx|SINE|Alu 9988 NM_173165 4775 Hs.436585 NM_004555 ENSG00000072736 NFATC3 NF-AT4c|NFAT4|NFATX nuclear factor of activated T cells 3 protein-coding chr14-494 chr14 99720351 99720595 + 6.35 0.000 intron (NM_006668, intron 10 of 14) AluSx1|SINE|Alu 36175 NM_006668 10858 Hs.25121 NM_006668 ENSG00000036530 CYP46A1 CP46|CYP46 cytochrome P450 family 46 subfamily A member 1 protein-coding chrX-358 chrX 13089230 13089474 + 6.35 0.000 Intergenic L1ME4a|LINE|L1 -44732 NM_174901 171484 Hs.667546 NM_174901 ENSG00000187268 FAM9C TEX39C family with sequence similarity 9 member C protein-coding chr2-1237 chr2 47171797 47172041 + 6.35 0.000 5' UTR (NM_001305626, exon 1 of 5) 5' UTR (NM_001305626, exon 1 of 5) 2288 NM_001305626 805 Hs.468442 NM_001743 ENSG00000143933 CALM2 CALM|CALML2|CAM1|CAM3|CAMC|CAMII|CAMIII|LQT15|PHKD|PHKD2|caM calmodulin 2 protein-coding chr8-391 chr8 42400573 42400817 + 6.35 0.000 intron (NM_001135694, intron 6 of 9) AluSc|SINE|Alu 8815 NM_005662 7419 Hs.699301 NM_005662 ENSG00000078668 VDAC3 HD-VDAC3|VDAC-3 voltage dependent anion channel 3 protein-coding chr14-644 chr14 73358556 73358800 + 6.35 0.000 intron (NM_001320114, intron 3 of 11) intron (NM_001320114, intron 3 of 11) 99902 NM_001005744 8650 Hs.525443 NM_003744 ENSG00000133961 NUMB C14orf41|S171|c14_5527 NUMB endocytic adaptor protein protein-coding chr11-822 chr11 107610529 107610773 + 6.35 0.000 intron (NM_001308018, intron 1 of 12) AluSz6|SINE|Alu 19504 NM_018712 55531 Hs.495779 NM_018712 ENSG00000110675 ELMOD1 - ELMO domain containing 1 protein-coding chr5-772 chr5 108200576 108200820 + 6.35 0.000 intron (NM_001163315, intron 5 of 8) intron (NM_001163315, intron 5 of 8) 181400 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding chr22-513 chr22 42323990 42324234 + 6.35 0.000 Intergenic Intergenic -40185 NM_005650 6942 Hs.475018 NM_005650 ENSG00000100207 TCF20 AR1|DDVIBA|SPBP|TCF-20 transcription factor 20 protein-coding chr8-617 chr8 29080256 29080500 + 6.35 0.000 intron (NM_015254, intron 37 of 39) intron (NM_015254, intron 37 of 39) 182692 NM_015254 23303 Hs.444767 NM_015254 ENSG00000197892 KIF13B GAKIN kinesin family member 13B protein-coding chr10-495 chr10 7378461 7378705 + 6.35 0.000 intron (NM_001029880, intron 2 of 20) (TGTG)n|Simple_repeat|Simple_repeat 30758 NM_001018039 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr14-431 chr14 78685529 78685773 + 6.35 0.000 intron (NR_073547, intron 6 of 20) AluSp|SINE|Alu 281932 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding chr13-481 chr13 61812606 61812850 + 6.35 0.000 Intergenic AluSx1|SINE|Alu 216820 NR_046995 100874143 Hs.552684 NR_046995 ENSG00000229578 LINC00358 - long intergenic non-protein coding RNA 358 ncRNA chr11-529 chr11 88438817 88439061 + 6.35 0.000 Intergenic HAL1|LINE|L1 -65637 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA chr3-1404 chr3 129759658 129759902 + 6.35 0.000 intron (NM_001349271, intron 2 of 4) AluY|SINE|Alu 34832 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr16-1125 chr16 56040267 56040511 + 6.35 0.000 Intergenic AluY|SINE|Alu -84358 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding chr22-457 chr22 45017897 45018141 + 6.35 0.000 Intergenic AluSq2|SINE|Alu -8014 NM_001135862 112885 Hs.254097 NM_138415 ENSG00000056487 PHF21B BHC80L|PHF4 PHD finger protein 21B protein-coding chr5-669 chr5 90635494 90635738 + 6.35 0.000 intron (NR_003149, intron 10 of 89) AluSz6|SINE|Alu 76819 NM_032119 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding chr22-566 chr22 25611685 25611929 + 6.35 0.000 intron (NM_001362778, intron 2 of 19) L1MB8|LINE|L1 47132 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding chr12-1076 chr12 31619447 31619691 + 6.35 0.000 Intergenic LTR54|LTR|ERV1 -27591 NM_001135864 254013 Hs.740628 NM_173802 ENSG00000139160 ETFBKMT C12orf72|ETFB-KMT|METTL20 electron transfer flavoprotein subunit beta lysine methyltransferase protein-coding chr11-1208 chr11 114962206 114962450 + 6.35 0.000 Intergenic AluSx|SINE|Alu 283801 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding chr7-912 chr7 8448652 8448896 + 6.35 0.000 intron (NM_152745, intron 2 of 2) AluSz|SINE|Alu 15165 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding chr5-942 chr5 159916379 159916623 + 6.35 0.000 promoter-TSS (NM_000679) promoter-TSS (NM_000679) 19 NM_000679 147 Hs.368632 NM_000679 ENSG00000170214 ADRA1B ADRA1|ALPHA1BAR adrenoceptor alpha 1B protein-coding chr5-916 chr5 122650173 122650417 + 6.35 0.000 intron (NR_109881, intron 8 of 11) AluY|SINE|Alu -65695 NR_134281 101927357 Hs.639856 NR_134281 LOC101927357 - uncharacterized LOC101927357 ncRNA chr22-365 chr22 18984267 18984511 + 6.35 0.000 intron (NR_045121, intron 1 of 2) AluSx1|SINE|Alu 13891 NR_045121 26220 Hs.646438 NR_002733 ENSG00000273032 DGCR5 LINC00037|NCRNA00037 DiGeorge syndrome critical region gene 5 ncRNA chr20-371 chr20 37247855 37248099 + 6.35 0.000 Intergenic AluSz|SINE|Alu 8931 NM_021081 2691 Hs.37023 NM_021081 ENSG00000118702 GHRH GHRF|GRF|INN growth hormone releasing hormone protein-coding chr3-897 chr3 186126125 186126369 + 6.20 0.000 Intergenic (TG)n|Simple_repeat|Simple_repeat -17158 NM_004454 2119 Hs.43697 NM_004454 ENSG00000244405 ETV5 ERM ETS variant 5 protein-coding chr1-1753 chr1 46533002 46533246 + 6.20 0.000 exon (NM_001357063, exon 3 of 3) exon (NM_001357063, exon 3 of 3) 2391 NM_001357063 105378696 NM_001357063 ENSG00000282881 TMEM275 - transmembrane protein 275 protein-coding chr20-365 chr20 19376498 19376742 + 6.20 0.000 intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -92024 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA chr16-725 chr16 53984190 53984434 + 6.20 0.000 intron (NM_001363988, intron 9 of 9) intron (NM_001363988, intron 9 of 9) -55081 NR_103838 100505692 Hs.664629 NR_103838 FTO-IT1 - FTO intronic transcript 1 ncRNA chr4-992 chr4 67508527 67508771 + 6.20 0.000 intron (NR_155754, intron 10 of 18) MIRb|SINE|MIR 36854 NM_001362481 1060 Hs.479867 NM_001812 ENSG00000145241 CENPC CENP-C|CENPC1|MIF2|hcp-4 centromere protein C protein-coding chr15-638 chr15 46259010 46259254 + 6.20 0.000 Intergenic L1PREC2|LINE|L1 553937 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA chrX-179 chrX 74376420 74376664 + 6.20 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -44951 NM_006517 6567 Hs.75317 NM_006517 ENSG00000147100 SLC16A2 AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT solute carrier family 16 member 2 protein-coding chr1-1375 chr1 106043619 106043863 + 6.20 0.000 Intergenic Intergenic -15488 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA chr1-2536 chr1 160185983 160186227 + 6.20 0.000 intron (NM_001001734, intron 3 of 4) AluSx|SINE|Alu -4470 NM_001231 844 Hs.632476 NM_001231 ENSG00000143318 CASQ1 CASQ|PDIB1|VMCQA calsequestrin 1 protein-coding chr12-1202 chr12 105332632 105332876 + 6.20 0.000 intron (NM_001145199, intron 1 of 5) AluSq2|SINE|Alu 2063 NM_001145199 387882 Hs.368938 NM_207376 ENSG00000235162 C12orf75 AGD3|OCC-1|OCC1 chromosome 12 open reading frame 75 protein-coding chr6-865 chr6 150998703 150998947 + 6.20 0.000 intron (NR_146720, intron 21 of 28) AluSz|SINE|Alu -8183 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding chr2-1736 chr2 74514436 74514680 + 6.20 0.000 5' UTR (NM_016170, exon 1 of 3) 5' UTR (NM_016170, exon 1 of 3) 108 NM_016170 3196 Hs.168586 NM_016170 ENSG00000115297 TLX2 HOX11L1|NCX T cell leukemia homeobox 2 protein-coding chr1-2142 chr1 239056757 239057001 + 6.20 0.000 Intergenic AluSx|SINE|Alu -329689 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding chr8-683 chr8 125334643 125334887 + 6.20 0.000 intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) -95593 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding chrX-228 chrX 137602498 137602742 + 6.20 0.000 Intergenic AluSx3|SINE|Alu 36493 NM_001330661 7547 Hs.111227 NM_003413 ENSG00000156925 ZIC3 HTX|HTX1|VACTERLX|ZNF203 Zic family member 3 protein-coding chr13-229 chr13 26036782 26037026 + 6.20 0.000 Intergenic AluJr|SINE|Alu 14156 NM_001007538 387914 Hs.433791 NM_001007538 ENSG00000180730 SHISA2 C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa shisa family member 2 protein-coding chr2-1514 chr2 132615710 132615954 + 6.20 0.000 intron (NM_001508, intron 1 of 1) MER96|DNA|hAT-Tip100 54373 NM_001321234 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding chr3-955 chr3 48347988 48348232 + 6.20 0.000 Intergenic Intergenic -19769 NM_001080525 646424 Hs.257687 NM_001080525 ENSG00000229453 SPINK8 - serine peptidase inhibitor, Kazal type 8 (putative) protein-coding chr10-907 chr10 102449671 102449915 + 6.20 0.000 promoter-TSS (NR_038937) promoter-TSS (NR_038937) -24 NR_038937 100505761 Hs.656457 NR_038937 ENSG00000269609 RPARP-AS1 - RPARP antisense RNA 1 ncRNA chr12-695 chr12 115551123 115551367 + 6.20 0.000 Intergenic Intergenic 597409 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA chr20-501 chr20 47584872 47585116 + 6.20 0.000 intron (NM_181659, intron 2 of 22) intron (NM_181659, intron 2 of 22) 83107 NM_181659 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding chr6-1054 chr6 119348678 119348922 + 6.20 0.000 exon (NM_005907, exon 2 of 13) exon (NM_005907, exon 2 of 13) 961 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding chr12-1237 chr12 117388476 117388720 + 6.20 0.000 Intergenic MIRb|SINE|MIR -26796 NM_001204218 4842 Hs.654410 NM_000620 ENSG00000089250 NOS1 IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS nitric oxide synthase 1 protein-coding chr5-539 chr5 113134466 113134710 + 6.20 0.000 intron (NM_001085377, intron 5 of 18) L1MA4|LINE|L1 157790 NR_038352 167227 Hs.443875 NM_152624 ENSG00000172795 DCP2 NUDT20 decapping mRNA 2 protein-coding chr1-1900 chr1 202967014 202967258 + 6.20 0.000 intron (NM_016243, intron 1 of 8) CpG 121 NM_016243 51706 Hs.334832 NM_016243 ENSG00000159348 CYB5R1 B5R.1|B5R1|B5R2|NQO3A2|humb5R2 cytochrome b5 reductase 1 protein-coding chr3-888 chr3 162073737 162073981 + 6.20 0.000 Intergenic Intergenic 577051 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding chr13-323 chr13 39449714 39449958 + 6.20 0.000 intron (NM_005780, intron 2 of 3) intron (NM_005780, intron 2 of 3) 153357 NM_005780 10186 Hs.507798 NM_005780 ENSG00000183722 LHFPL6 LHFP LHFPL tetraspan subfamily member 6 protein-coding chr5-765 chr5 82100672 82100916 + 6.20 0.000 intron (NM_031482, intron 3 of 7) L3b|LINE|CR1 128771 NM_001131028 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding chr2-1813 chr2 123835693 123835937 + 6.20 0.000 Intergenic Intergenic 189359 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA chr22-755 chr22 50643656 50643900 + 6.20 0.000 Intergenic LTR8|LTR|ERV1 -15626 NM_000487 410 Hs.88251 NM_000487 ENSG00000100299 ARSA ASA|MLD arylsulfatase A protein-coding chr3-1497 chr3 194314697 194314941 + 6.20 0.000 Intergenic AluJr|SINE|Alu -2015 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA chr7-1330 chr7 85186665 85186909 + 6.05 0.000 Intergenic CpG -64856 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding chr22-553 chr22 17435461 17435705 + 6.05 0.000 intron (NM_001290047, intron 1 of 18) intron (NM_001290047, intron 1 of 18) 66123 NM_001290047 27443 Hs.231895 NM_031413 ENSG00000099954 CECR2 - CECR2 histone acetyl-lysine reader protein-coding chr2-1920 chr2 215385579 215385823 + 6.05 0.000 intron (NM_212482, intron 28 of 45) L1MC4|LINE|L1 50367 NM_001365518 2335 Hs.203717 NM_002026 ENSG00000115414 FN1 CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF fibronectin 1 protein-coding chr10-1030 chr10 100277487 100277731 + 6.05 0.000 intron (NM_173809, intron 4 of 4) SVA_D|Retroposon|SVA 8755 NM_001001342 282991 Hs.34906 NM_173809 ENSG00000196072 BLOC1S2 BLOS2|BORCS2|CEAP|CEAP11 biogenesis of lysosomal organelles complex 1 subunit 2 protein-coding chr2-1966 chr2 231911566 231911810 + 6.05 0.000 Intergenic Intergenic 14708 NM_024409 4880 Hs.247916 NM_024409 ENSG00000163273 NPPC CNP|CNP2 natriuretic peptide C protein-coding chr22-508 chr22 39555338 39555582 + 6.05 0.000 Intergenic Intergenic -15293 NM_001003406 8911 Hs.125116 NM_021096 ENSG00000100346 CACNA1I Cav3.3|ca(v)3.3 calcium voltage-gated channel subunit alpha1 I protein-coding chr6-820 chr6 73277749 73277993 + 6.05 0.000 intron (NR_027005, intron 3 of 4) AluJo|SINE|Alu -14675 NM_030568 80759 Hs.433062 NM_030568 ENSG00000135314 KHDC1 C6orf147|C6orf148|Em:AC019205.8|KHDC1L|NDG1|bA257K9.4 KH domain containing 1 protein-coding chr15-442 chr15 85861647 85861891 + 6.05 0.000 Intergenic AluSx1|SINE|Alu 36134 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA chr16-932 chr16 20160672 20160916 + 6.05 0.000 Intergenic Intergenic -87016 NM_001318483 124274 Hs.446875 NM_001002911 ENSG00000180269 GPR139 GPRg1|PGR3 G protein-coupled receptor 139 protein-coding chr10-1132 chr10 34606841 34607085 + 6.05 0.000 intron (NM_001184789, intron 2 of 22) AluSc|SINE|Alu 208333 NM_019619 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding chr5-833 chr5 170838882 170839126 + 6.05 0.000 Intergenic AluSx1|SINE|Alu -23014 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding chr15-415 chr15 40602354 40602598 + 6.05 0.000 intron (NM_144508, intron 1 of 25) intron (NM_144508, intron 1 of 25) 8227 NM_170589 57082 Hs.181855 NM_144508 ENSG00000137812 KNL1 AF15Q14|CASC5|CT29|D40|MCPH4|PPP1R55|Spc7|hKNL-1|hSpc105 kinetochore scaffold 1 protein-coding chr6-526 chr6 69915836 69916080 + 6.05 0.000 intron (NM_001858, intron 4 of 50) AluY|SINE|Alu 49402 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding chr13-427 chr13 20693532 20693776 + 6.05 0.000 Intergenic L1MEg|LINE|L1 -9689 NM_138284 53342 Hs.655142 NM_138284 ENSG00000172458 IL17D IL-17D interleukin 17D protein-coding chr8-595 chr8 4253781 4254025 + 6.05 0.000 intron (NM_033225, intron 3 of 69) intron (NM_033225, intron 3 of 69) 741011 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding chr11-1342 chr11 90610897 90611141 + 6.05 0.000 intron (NR_104190, intron 3 of 6) L1MC5|LINE|L1 -55162 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA chr4-1119 chr4 188779928 188780172 + 6.05 0.000 intron (NR_149102, intron 1 of 2) intron (NR_149102, intron 1 of 2) 3393 NR_149102 105377610 NR_149102 ENSG00000251619 LINC02508 - long intergenic non-protein coding RNA 2508 ncRNA chr17-645 chr17 66421302 66421546 + 6.05 0.000 intron (NM_002737, intron 2 of 16) intron (NM_002737, intron 2 of 16) -4570 NR_110822 101928001 Hs.650730 NR_110822 PRKCA-AS1 - PRKCA antisense RNA 1 ncRNA chr7-1263 chr7 37753647 37753891 + 6.05 0.000 Intergenic Intergenic 70003 NM_181791 353345 Hs.563492 NM_181791 ENSG00000187037 GPR141 PGR13 G protein-coupled receptor 141 protein-coding chr8-821 chr8 22962165 22962409 + 6.05 0.000 Intergenic Intergenic -21210 NM_001363233 157310 Hs.491242 NM_144962 ENSG00000134020 PEBP4 CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4 phosphatidylethanolamine binding protein 4 protein-coding chr1-523 chr1 10156 10400 + 6.05 0.000 Intergenic (TAACCC)n|Simple_repeat|Simple_repeat -1596 NR_046018 100287102 Hs.618434 NR_046018 ENSG00000223972 DDX11L1 - DEAD/H-box helicase 11 like 1 pseudo chr18-227 chr18 24527664 24527908 + 6.05 0.000 Intergenic Intergenic 67149 NM_001160166 59340 Hs.287388 NM_021624 ENSG00000134489 HRH4 AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R histamine receptor H4 protein-coding chr11-1426 chr11 14358878 14359122 + 6.05 0.000 promoter-TSS (NM_001177315) promoter-TSS (NM_001177315) 183 NM_012250 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding chr5-998 chr5 27694377 27694621 + 6.05 0.000 Intergenic L1PB1|LINE|L1 222207 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA chr5-430 chr5 143340352 143340596 + 6.05 0.000 intron (NR_157096, intron 1 of 7) intron (NR_157096, intron 1 of 7) 62809 NM_001364182 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding chr12-1173 chr12 88413373 88413617 + 6.05 0.000 Intergenic Intergenic 166976 NM_000899 4254 Hs.1048 NM_000899 ENSG00000049130 KITLG DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7|SLF KIT ligand protein-coding chr14-704 chr14 52803884 52804128 + 6.05 0.000 Intergenic AluJo|SINE|Alu -12399 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding chr12-719 chr12 624983 625227 + 6.05 0.000 intron (NM_016533, intron 1 of 3) AluSq|SINE|Alu -5786 NR_122124 100049716 Hs.655804 NR_122124 ENSG00000177406 LOC100049716 - uncharacterized LOC100049716 ncRNA chr21-196 chr21 9246085 9246329 + 6.05 0.000 Intergenic Intergenic -116446 NR_038327 100132288 Hs.487562 NM_174948 ENSG00000188681 TEKT4P2 MAFIPL|TEKT4P tektin 4 pseudogene 2 pseudo chr18-320 chr18 25952733 25952977 + 6.05 0.000 Intergenic Intergenic 137758 NM_001007559 6760 Hs.129261 NM_005637 ENSG00000141380 SS18 SSXT|SYT SS18 subunit of BAF chromatin remodeling complex protein-coding chrX-425 chrX 19691106 19691350 + 6.05 0.000 intron (NM_001353893, intron 4 of 17) L1MC5|LINE|L1 -20229 NM_001184960 30011 Hs.726365 NM_031892 ENSG00000147010 SH3KBP1 AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 SH3 domain containing kinase binding protein 1 protein-coding chr15-236 chr15 73684115 73684359 + 6.05 0.000 promoter-TSS (NM_001329628) promoter-TSS (NM_001329628) -44 NM_025240 80381 Hs.744915 NM_025240 ENSG00000103855 CD276 4Ig-B7-H3|B7-H3|B7H3|B7RP-2 CD276 molecule protein-coding chr19-1573 chr19 32204852 32205096 + 6.05 0.000 Intergenic L1M5|LINE|L1 -99058 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA chr12-473 chr12 57573568 57573812 + 6.05 0.000 intron (NM_004984, intron 15 of 28) AluSp|SINE|Alu -17502 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding chr18-284 chr18 62200422 62200666 + 6.05 0.000 intron (NR_144409, intron 1 of 31) intron (NR_144409, intron 1 of 31) 13289 NM_001346233 57614 Hs.465323 NM_020854 ENSG00000134444 RELCH HsT3308|HsT885|KIAA1468 RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing protein-coding chr10-1089 chr10 11284280 11284524 + 6.05 0.000 intron (NM_001025076, intron 8 of 13) (GATGGAT)n|Simple_repeat|Simple_repeat 60272 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA chr14-402 chr14 35561259 35561503 + 6.05 0.000 intron (NM_014990, intron 38 of 40) intron (NM_014990, intron 38 of 40) 27217 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding chr9-1086 chr9 92972938 92973182 + 6.05 0.000 intron (NM_001369951, intron 1 of 17) L1MEc|LINE|L1 -1376 NM_033086 89846 Hs.411081 NM_033086 ENSG00000127084 FGD3 ZFYVE5 FYVE, RhoGEF and PH domain containing 3 protein-coding chr18-274 chr18 35063821 35064065 + 6.05 0.000 intron (NR_046177, intron 1 of 6) AluJo|SINE|Alu 22530 NM_001256420 10982 Hs.532824 NM_014268 ENSG00000166974 MAPRE2 CSCSC2|EB1|EB2|RP1 microtubule associated protein RP/EB family member 2 protein-coding chr12-687 chr12 108608956 108609200 + 6.05 0.000 Intergenic MIRb|SINE|MIR -10994 NM_181724 338773 Hs.449718 NM_181724 ENSG00000183160 TMEM119 OBIF transmembrane protein 119 protein-coding chr20-550 chr20 21352978 21353222 + 6.05 0.000 intron (NM_001317960, intron 20 of 29) intron (NM_001317960, intron 20 of 29) 44426 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding chr8-636 chr8 56390275 56390519 + 6.05 0.000 intron (NR_103832, intron 1 of 3) AluY|SINE|Alu 313 NR_103832 442388 Hs.632065 NM_001145251 ENSG00000253542 SDR16C6P SDR16C6 short chain dehydrogenase/reductase family 16C member 6, pseudogene pseudo chr15-466 chr15 42966545 42966789 + 6.05 0.000 intron (NM_174916, intron 40 of 46) AluSx1|SINE|Alu -45889 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding chr3-1505 chr3 196098452 196098696 + 6.05 0.000 Intergenic AluJo|SINE|Alu -16484 NM_001313966 7037 Hs.529618 NM_003234 ENSG00000072274 TFRC CD71|IMD46|T9|TFR|TFR1|TR|TRFR|p90 transferrin receptor protein-coding chr2-990 chr2 148875121 148875365 + 6.05 0.000 promoter-TSS (NM_004522) promoter-TSS (NM_004522) 16 NM_004522 3800 Hs.435557 NM_004522 ENSG00000168280 KIF5C CDCBM2|KINN|NKHC|NKHC-2|NKHC2 kinesin family member 5C protein-coding chr17-1361 chr17 60150580 60150824 + 6.05 0.000 intron (NR_137422, intron 1 of 11) CpG 729 NR_137422 762 Hs.89485 NM_000717 ENSG00000167434 CA4 CAIV|Car4|RP17 carbonic anhydrase 4 protein-coding chr1-2088 chr1 167803858 167804102 + 6.05 0.000 Intergenic Intergenic 81998 NM_003953 9019 Hs.493919 NM_003953 ENSG00000197965 MPZL1 MPZL1b|PZR|PZR1b|PZRa|PZRb myelin protein zero like 1 protein-coding chr6-1008 chr6 72669744 72669988 + 5.90 0.000 intron (NR_120503, intron 2 of 3) MLT1A-int|LTR|ERVL-MaLR 39371 NR_120503 100507381 Hs.662412 NR_120503 ENSG00000233844 KCNQ5-IT1 - KCNQ5 intronic transcript 1 ncRNA chr18-181 chr18 36395209 36395453 + 5.90 0.000 intron (NM_001281740, intron 3 of 28) intron (NM_001281740, intron 3 of 28) 97618 NM_001281740 80206 Hs.436636 NM_025135 ENSG00000134775 FHOD3 FHOS2|Formactin2 formin homology 2 domain containing 3 protein-coding chr7-1082 chr7 11992374 11992618 + 5.90 0.000 Intergenic AluSx3|SINE|Alu -160298 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding chr3-1200 chr3 196338684 196338928 + 5.90 0.000 promoter-TSS (NM_001204897) promoter-TSS (NM_001204897) -386 NR_037950 100534611 Hs.733180 NR_037950 TM4SF19-TCTEX1D2 - TM4SF19-TCTEX1D2 readthrough (NMD candidate) ncRNA chrX-174 chrX 18015918 18016162 + 5.90 0.000 intron (NR_133641, intron 1 of 4) intron (NR_133641, intron 1 of 4) 88604 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA chr20-299 chr20 38799024 38799268 + 5.90 0.000 Intergenic AluSc8|SINE|Alu -6551 NM_015568 26051 Hs.45719 NM_015568 ENSG00000101445 PPP1R16B ANKRD4|TIMAP protein phosphatase 1 regulatory subunit 16B protein-coding chr8-726 chr8 19013857 19014101 + 5.90 0.000 promoter-TSS (NM_015310) promoter-TSS (NM_015310) -276 NM_015310 23362 Hs.434255 NM_015310 ENSG00000156011 PSD3 EFA6D|EFA6R|HCA67 pleckstrin and Sec7 domain containing 3 protein-coding chr12-1218 chr12 109603192 109603436 + 5.90 0.000 Intergenic AluJr|SINE|Alu 29520 NM_001301182 4598 Hs.130607 NM_000431 ENSG00000110921 MVK LRBP|MK|MVLK|POROK3 mevalonate kinase protein-coding chr14-774 chr14 96414562 96414806 + 5.90 0.000 intron (NM_001350890, intron 4 of 16) intron (NM_001350890, intron 4 of 16) 22556 NM_152327 122481 Hs.667462 NM_152327 ENSG00000140057 AK7 AK 7|SPGF27 adenylate kinase 7 protein-coding ML143345.1-1 ML143345.1 72525 72769 + 5.90 0.000 NA NA NA NA chr12-843 chr12 56288214 56288458 + 5.90 0.000 intron (NM_004077, intron 1 of 10) intron (NM_004077, intron 1 of 10) 11994 NM_004077 1431 Hs.743252 NM_004077 ENSG00000062485 CS - citrate synthase protein-coding chr3-1461 chr3 166545462 166545706 + 5.90 0.000 Intergenic MLT1G1|LTR|ERVL-MaLR -353099 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA chr7-394 chr7 103770806 103771050 + 5.90 0.000 intron (NM_005045, intron 4 of 64) AluSx1|SINE|Alu 218588 NM_173054 5649 Hs.655654 NM_005045 ENSG00000189056 RELN ETL7|LIS2|PRO1598|RL reelin protein-coding chrX-252 chrX 71324481 71324725 + 5.90 0.000 Intergenic AluJo|SINE|Alu 22853 NM_012278 26548 Hs.109999 NM_012278 ENSG00000147166 ITGB1BP2 CHORDC3|ITGB1BP|MELUSIN|MSTP015 integrin subunit beta 1 binding protein 2 protein-coding chr21-113 chr21 31352440 31352684 + 5.90 0.000 intron (NM_001353690, intron 1 of 27) (A)n|Simple_repeat|Simple_repeat -8208 NM_001353694 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr19-789 chr19 6885637 6885881 + 5.90 0.000 Intergenic AluSx|SINE|Alu -1820 NM_001256255 2015 Hs.2375 NM_001974 ENSG00000174837 ADGRE1 EMR1|TM7LN3 adhesion G protein-coupled receptor E1 protein-coding chr15-675 chr15 66817659 66817903 + 5.90 0.000 Intergenic AluYc3|SINE|Alu 115545 NR_027654 4091 Hs.153863 NM_005585 ENSG00000137834 SMAD6 AOVD2|HsT17432|MADH6|MADH7 SMAD family member 6 protein-coding chr2-1716 chr2 63020807 63021051 + 5.90 0.000 intron (NM_001142615, intron 19 of 22) AluSx|SINE|Alu 26782 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA chr9-1332 chr9 127306613 127306857 + 5.90 0.000 intron (NR_104591, intron 2 of 26) AluY|SINE|Alu 41961 NM_032293 84253 Hs.29304 NM_032293 ENSG00000136895 GARNL3 bA356B19.1 GTPase activating Rap/RanGAP domain like 3 protein-coding chr11-559 chr11 17488117 17488361 + 5.90 0.000 Intergenic L1MA2|LINE|L1 -11394 NM_001287174 6833 Hs.54470 NM_000352 ENSG00000006071 ABCC8 ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2 ATP binding cassette subfamily C member 8 protein-coding chr1-2616 chr1 203385681 203385925 + 5.90 0.000 Intergenic Intergenic -34681 NR_103757 2331 Hs.519168 NM_002023 ENSG00000122176 FMOD FM|SLRR2E fibromodulin protein-coding chr3-573 chr3 47146505 47146749 + 5.90 0.000 intron (NR_146158, intron 1 of 21) AluSx1|SINE|Alu 17350 NM_014159 29072 Hs.517941 NM_012271 ENSG00000181555 SETD2 HBP231|HIF-1|HIP-1|HSPC069|HYPB|KMT3A|LLS|SET2|p231HBP SET domain containing 2, histone lysine methyltransferase protein-coding chr13-254 chr13 80399392 80399636 + 5.90 0.000 Intergenic HERVK14-int|LTR|ERVK -58388 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding chrX-313 chrX 80249061 80249305 + 5.90 0.000 intron (NR_110646, intron 5 of 5) AluY|SINE|Alu 86135 NR_110646 101060146 Hs.546064 NR_110646 ENSG00000278530 CHMP1B2P - charged multivesicular body protein 1B2, pseudogene pseudo chr16-792 chr16 9772807 9773051 + 5.90 0.000 intron (NM_001134408, intron 11 of 13) (A)n|Simple_repeat|Simple_repeat -317424 NR_126349 104266959 Hs.578888 NR_126349 ENSG00000261075 LINC01195 - long intergenic non-protein coding RNA 1195 ncRNA chr2-1255 chr2 69987405 69987649 + 5.90 0.000 intron (NR_033872, intron 9 of 10) AluJr|SINE|Alu -25262 NM_152792 151516 Hs.516253 NM_152792 ENSG00000244617 ASPRV1 MUNO|SASP|SASPase|Taps aspartic peptidase retroviral like 1 protein-coding chr18-341 chr18 53920719 53920963 + 5.90 0.000 Intergenic (GT)n|Simple_repeat|Simple_repeat 301571 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA chr7-586 chr7 100912673 100912917 + 5.90 0.000 Intergenic AluSp|SINE|Alu -15801 NR_160407 43 Hs.154495 NM_000665 ENSG00000087085 ACHE ACEE|ARACHE|N-ACHE|YT acetylcholinesterase (Cartwright blood group) protein-coding chr6-548 chr6 121743010 121743254 + 5.90 0.000 Intergenic AluJo|SINE|Alu 307486 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding chr14-301 chr14 81400338 81400582 + 5.90 0.000 intron (NM_001366850, intron 2 of 7) intron (NM_001366850, intron 2 of 7) 27315 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding chr8-394 chr8 51138628 51138872 + 5.90 0.000 Intergenic Intergenic 670695 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding chr1-2141 chr1 236436522 236436766 + 5.75 0.000 intron (NM_080738, intron 4 of 5) AluJb|SINE|Alu 41231 NM_080738 128178 Hs.352224 NM_080738 ENSG00000186197 EDARADD ECTD11A|ECTD11B|ED3|EDA3 EDAR associated death domain protein-coding chr14-545 chr14 64434781 64435025 + 5.75 0.000 intron (NM_005956, intron 15 of 27) AluJb|SINE|Alu -30596 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding chr21-197 chr21 15195247 15195491 + 5.75 0.000 Intergenic AluJb|SINE|Alu -130369 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding chr1-1535 chr1 109419782 109420026 + 5.75 0.000 intron (NM_001199772, intron 1 of 7) AluJb|SINE|Alu 6544 NM_002790 5686 Hs.485246 NM_002790 ENSG00000143106 PSMA5 PSC5|ZETA proteasome subunit alpha 5 protein-coding chr19-1100 chr19 41824371 41824615 + 5.75 0.000 Intergenic AluYf1|SINE|Alu 19234 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr10-1022 chr10 83299812 83300056 + 5.75 0.000 Intergenic Intergenic 377155 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr10-572 chr10 34960246 34960490 + 5.75 0.000 Intergenic AluSx3|SINE|Alu 113915 NM_001198778 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding chr12-1097 chr12 49159452 49159696 + 5.75 0.000 Intergenic Intergenic -28179 NM_006082 10376 Hs.524390 NM_006082 ENSG00000123416 TUBA1B K-ALPHA-1 tubulin alpha 1b protein-coding chr18-272 chr18 30685119 30685363 + 5.75 0.000 Intergenic AluJo|SINE|Alu 357501 NM_001941 1825 Hs.41690 NM_001941 ENSG00000134762 DSC3 CDHF3|DSC|DSC1|DSC2|DSC4|HT-CP desmocollin 3 protein-coding chr5-593 chr5 96421741 96421985 + 5.75 0.000 intron (NM_001177875, intron 5 of 13) intron (NM_001177875, intron 5 of 13) 10296 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding chr11-787 chr11 18672846 18673090 + 5.75 0.000 Intergenic AluSx|SINE|Alu -25811 NM_153347 144110 Hs.502100 NM_153347 ENSG00000151117 TMEM86A - transmembrane protein 86A protein-coding chr2-1032 chr2 219343408 219343652 + 5.75 0.000 Intergenic L1MEg|LINE|L1 -10353 NM_001007089 389075 Hs.290551 NM_001007089 ENSG00000182698 RESP18 - regulated endocrine specific protein 18 protein-coding chr3-840 chr3 53323653 53323897 + 5.75 0.000 intron (NM_001290207, intron 2 of 7) AluSx|SINE|Alu 9352 NR_145715 109617024 NR_145715 ENSG00000207109 SNORD38C - small nucleolar RNA, C/D box 38C snoRNA chr11-1017 chr11 74082012 74082256 + 5.75 0.000 intron (NM_001286577, intron 22 of 32) AluY|SINE|Alu -72897 NM_022803 7352 Hs.101337 NM_003356 ENSG00000175564 UCP3 SLC25A9 uncoupling protein 3 protein-coding chr16-913 chr16 1231105 1231349 + 5.75 0.000 Intergenic Intergenic -1043 NM_024164 64499 Hs.405479 NM_024164 ENSG00000197253 TPSB2 TPS2|tryptaseB|tryptaseC tryptase beta 2 (gene/pseudogene) protein-coding chr7-1041 chr7 147315362 147315606 + 5.75 0.000 intron (NM_014141, intron 8 of 22) AluY|SINE|Alu 62637 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chrX-552 chrX 133841066 133841310 + 5.75 0.000 intron (NM_001164619, intron 1 of 6) AluJo|SINE|Alu -56255 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr3-1306 chr3 53278501 53278745 + 5.75 0.000 Intergenic AluSz|SINE|Alu -22509 NR_047580 7086 Hs.89643 NM_001064 ENSG00000163931 TKT HEL-S-48|HEL107|SDDHD|TK|TKT1 transketolase protein-coding chr3-1178 chr3 173881371 173881615 + 5.75 0.000 intron (NM_001365928, intron 4 of 6) AluY|SINE|Alu 39303 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA chr8-762 chr8 93039467 93039711 + 5.75 0.000 Intergenic SVA_D|Retroposon|SVA 9838 NR_107051 102467005 NR_107051 ENSG00000277063 MIR8084 hsa-mir-8084 microRNA 8084 ncRNA chr2-1242 chr2 58120070 58120314 + 5.75 0.000 intron (NM_001130483, intron 7 of 13) AluSz|SINE|Alu 73480 NM_001130481 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding chr2-1133 chr2 165393773 165394017 + 5.75 0.000 Intergenic AluJo|SINE|Alu -75803 NM_001172173 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding chr6-1118 chr6 159038228 159038472 + 5.75 0.000 TTS (NM_138810) TTS (NM_138810) 4003 NM_001278733 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding chrX-229 chrX 139866313 139866557 + 5.75 0.000 intron (NM_001353812, intron 1 of 29) MIR|SINE|MIR -34194 NM_001010986 286410 Hs.88252 NM_173694 ENSG00000101974 ATP11C ATPIG|ATPIQ|HACXL ATPase phospholipid transporting 11C protein-coding chr5-718 chr5 6918113 6918357 + 5.75 0.000 Intergenic L1PB1|LINE|L1 -90314 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA chr10-799 chr10 21557823 21558067 + 5.75 0.000 TTS (NM_001324296) TTS (NM_001324296) 23773 NR_136736 8028 Hs.30385 NM_004641 ENSG00000078403 MLLT10 AF10 MLLT10 histone lysine methyltransferase DOT1L cofactor protein-coding chr4-949 chr4 38737652 38737896 + 5.75 0.000 Intergenic AluSc8|SINE|Alu 45216 NM_001195106 81793 Hs.120551 NM_030956 ENSG00000174123 TLR10 CD290 toll like receptor 10 protein-coding chrX-225 chrX 133823015 133823259 + 5.75 0.000 intron (NM_001164619, intron 1 of 6) AluSx1|SINE|Alu -74306 NR_148713 110806308 Hs.658628 NR_148713 ENSG00000286096 GPC3-AS1 - GPC3 antisense RNA 1 ncRNA chr12-565 chr12 8592012 8592256 + 5.75 0.000 Intergenic AluSx1|SINE|Alu 20725 NM_020661 57379 Hs.149342 NM_020661 ENSG00000111732 AICDA AID|ARP2|CDA2|HEL-S-284|HIGM2 activation induced cytidine deaminase protein-coding chr4-833 chr4 121071531 121071775 + 5.75 0.000 intron (NM_024574, intron 1 of 3) CpG 882 NM_024574 79625 Hs.709520 NM_024574 ENSG00000173376 NDNF C4orf31|NORD neuron derived neurotrophic factor protein-coding chr6-741 chr6 147378279 147378523 + 5.75 0.000 intron (NM_139244, intron 24 of 25) L1MEg|LINE|L1 -130289 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding chr2-1823 chr2 130749169 130749413 + 5.75 0.000 Intergenic Intergenic -6249 NM_001105193 205147 Hs.369289 NM_152698 ENSG00000178171 AMER3 FAM123C APC membrane recruitment protein 3 protein-coding chr19-1109 chr19 46395512 46395756 + 5.75 0.000 Intergenic AluSx3|SINE|Alu 17930 NM_032040 83987 Hs.97876 NM_032040 ENSG00000169515 CCDC8 3M3|PPP1R20|p90 coiled-coil domain containing 8 protein-coding chr2-849 chr2 86245686 86245930 + 5.59 0.000 intron (NM_001164732, intron 3 of 4) AluY|SINE|Alu 46351 NM_016622 51318 Hs.433439 NM_016622 ENSG00000132313 MRPL35 L35mt|MRP-L35 mitochondrial ribosomal protein L35 protein-coding chr8-908 chr8 89102867 89103111 + 5.59 0.000 Intergenic L1MB1|LINE|L1 654722 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA chr2-1105 chr2 91571725 91571969 + 5.59 0.000 Intergenic Intergenic 88102 NR_027238 654342 Hs.469287 NR_027238 LSP1P4 - LSP1 pseudogene 4 pseudo chr11-1440 chr11 30444330 30444574 + 5.59 0.000 intron (NM_001584, intron 3 of 5) (T)n|Simple_repeat|Simple_repeat 121348 NM_152316 120534 Hs.502208 NM_152316 ENSG00000152219 ARL14EP ARF7EP|C11orf46|dJ299F11.1 ADP ribosylation factor like GTPase 14 effector protein protein-coding chr4-786 chr4 1903621 1903865 + 5.59 0.000 intron (NM_133334, intron 1 of 8) AluY|SINE|Alu 3117 NM_133334 7468 Hs.113876 NM_007331 ENSG00000109685 NSD2 KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 nuclear receptor binding SET domain protein 2 protein-coding chr6-978 chr6 43557023 43557267 + 5.59 0.000 intron (NR_144392, intron 12 of 32) AluSc8|SINE|Alu 18893 NM_020750 57510 Hs.203206 NM_020750 ENSG00000124571 XPO5 exp5 exportin 5 protein-coding chr22-662 chr22 33586338 33586582 + 5.59 0.000 intron (NM_133642, intron 5 of 14) AluY|SINE|Alu 118460 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA chr19-1214 chr19 17919697 17919941 + 5.59 0.000 Intergenic AluJb|SINE|Alu -13196 NM_001136203 115098 Hs.100043 NM_138442 ENSG00000007080 CCDC124 - coiled-coil domain containing 124 protein-coding chr17-945 chr17 19840472 19840716 + 5.59 0.000 intron (NM_014683, intron 9 of 26) intron (NM_014683, intron 9 of 26) 27342 NM_014683 9706 Hs.168762 NM_014683 ENSG00000083290 ULK2 ATG1B|Unc51.2 unc-51 like autophagy activating kinase 2 protein-coding chr10-1266 chr10 103255404 103255648 + 5.59 0.000 Intergenic Intergenic 9639 NM_001143909 729020 Hs.458437 NM_001143909 ENSG00000235376 RPEL1 - ribulose-5-phosphate-3-epimerase like 1 protein-coding chr3-1102 chr3 21693734 21693978 + 5.59 0.000 intron (NM_024697, intron 1 of 7) intron (NM_024697, intron 1 of 7) 57354 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding chr8-440 chr8 30135784 30136028 + 5.59 0.000 intron (NM_001100916, intron 2 of 2) AluJb|SINE|Alu 8759 NM_001100916 619373 Hs.627194 NM_001100916 ENSG00000177669 MBOAT4 FKSG89|GOAT|OACT4 membrane bound O-acyltransferase domain containing 4 protein-coding chr16-953 chr16 67755571 67755815 + 5.59 0.000 intron (NM_001320238, intron 2 of 12) AluSx|SINE|Alu -36377 NR_027398 81577 Hs.307084 NM_030819 ENSG00000141098 GFOD2 - glucose-fructose oxidoreductase domain containing 2 protein-coding chr11-1626 chr11 96130662 96130906 + 5.59 0.000 intron (NM_032427, intron 1 of 4) L3|LINE|CR1 -206577 NM_016156 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding chr5-1111 chr5 133546328 133546572 + 5.59 0.000 intron (NM_015082, intron 3 of 15) AluSx|SINE|Alu 66091 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding chr19-1609 chr19 41821846 41822090 + 5.59 0.000 Intergenic AluY|SINE|Alu 21759 NM_001291419 147719 Hs.98660 NM_173506 ENSG00000273111 LYPD4 SMR LY6/PLAUR domain containing 4 protein-coding chr7-1380 chr7 109038540 109038784 + 5.59 0.000 Intergenic Intergenic -154075 NM_001024607 154907 Hs.276325 NM_001024607 C7orf66 - chromosome 7 open reading frame 66 protein-coding chr6-573 chr6 165561097 165561341 + 5.59 0.000 intron (NM_001130690, intron 1 of 21) AluSc8|SINE|Alu 100881 NM_001130690 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding chr9-1282 chr9 109108327 109108571 + 5.59 0.000 intron (NM_032012, intron 2 of 17) intron (NM_032012, intron 2 of 17) 11498 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding chr11-561 chr11 28058400 28058644 + 5.59 0.000 intron (NM_031217, intron 13 of 16) AluJo|SINE|Alu 1707 NR_030341 693195 NR_030341 ENSG00000207874 MIR610 MIRN610|hsa-mir-610 microRNA 610 ncRNA chrX-310 chrX 75273938 75274182 + 5.59 0.000 promoter-TSS (NM_145052) promoter-TSS (NM_145052) 1 NR_030774 139596 Hs.91612 NM_145052 ENSG00000094841 UPRT FUR1|UPP uracil phosphoribosyltransferase homolog protein-coding chr8-481 chr8 29736298 29736542 + 5.59 0.000 intron (NR_026765, intron 1 of 3) AluY|SINE|Alu 11689 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA chr3-883 chr3 151545927 151546171 + 5.59 0.000 Intergenic MER58C|DNA|hAT-Charlie 19946 NR_049818 100847036 NR_049818 ENSG00000264330 MIR5186 - microRNA 5186 ncRNA ML143345.1-3 ML143345.1 79661 79905 + 5.59 0.000 NA NA NA NA chr20-464 chr20 1266633 1266877 + 5.59 0.000 5' UTR (NM_014723, exon 2 of 6) 5' UTR (NM_014723, exon 2 of 6) 461 NM_001318234 9751 Hs.323833 NM_014723 ENSG00000101298 SNPH - syntaphilin protein-coding chr1-2526 chr1 156318133 156318377 + 5.59 0.000 intron (NM_001008800, intron 6 of 11) AluJb|SINE|Alu -18618 NM_001004319 391104 Hs.532378 NM_001004319 ENSG00000189030 VHLL VHLP|VLP VHL like protein-coding chr3-1387 chr3 122341763 122342007 + 5.59 0.000 TTS (NM_005213) TTS (NM_005213) 16637 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding chr20-383 chr20 52297476 52297720 + 5.44 0.000 Intergenic MER58A|DNA|hAT-Charlie -105613 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding chr7-638 chr7 76000110 76000354 + 5.44 0.000 intron (NR_134487, intron 6 of 6) AluSx|SINE|Alu -5637 NM_001317803 83862 Hs.488835 NM_031925 ENSG00000189077 TMEM120A NET29|TMPIT transmembrane protein 120A protein-coding chr1-2085 chr1 161339499 161339743 + 5.44 0.000 intron (NR_103459, intron 4 of 6) intron (NR_103459, intron 4 of 6) 25240 NM_001278172 6391 Hs.444472 NM_003001 ENSG00000143252 SDHC CYB560|CYBL|PGL3|QPS1|SDH3 succinate dehydrogenase complex subunit C protein-coding chr8-904 chr8 86273057 86273301 + 5.44 0.000 Intergenic Intergenic -42798 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding chr2-1401 chr2 234816558 234816802 + 5.44 0.000 Intergenic Intergenic 134012 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA chr2-1191 chr2 10876729 10876973 + 5.44 0.000 Intergenic AluJr|SINE|Alu -1416 NR_110575 101929733 Hs.736697 NR_110575 ENSG00000271952 LINC01954 - long intergenic non-protein coding RNA 1954 ncRNA chr15-655 chr15 59430138 59430382 + 5.44 0.000 Intergenic AluSx|SINE|Alu -7926 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding chr7-982 chr7 78076323 78076567 + 5.44 0.000 intron (NM_001301128, intron 20 of 20) AluJb|SINE|Alu 236315 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding chr1-2409 chr1 67477860 67478104 + 5.44 0.000 Intergenic AluY|SINE|Alu -47580 NM_001018068 26135 Hs.530412 NM_015640 ENSG00000142864 SERBP1 CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1 SERPINE1 mRNA binding protein 1 protein-coding chr1-992 chr1 10929810 10930054 + 5.44 0.000 Intergenic AluSq|SINE|Alu 36755 NM_001366227 148345 Hs.127026 NM_173507 ENSG00000175262 C1orf127 - chromosome 1 open reading frame 127 protein-coding chr1-1182 chr1 103433559 103433803 + 5.44 0.000 intron (NM_001347930, intron 1 of 4) L1MCa|LINE|L1 91830 NM_001347930 101928436 Hs.558999 NM_001286997 LOC101928436 - uncharacterized LOC101928436 protein-coding chr20-645 chr20 61147206 61147450 + 5.44 0.000 Intergenic L1PA5|LINE|L1 68264 NR_109919 100506470 Hs.125674 NR_109919 ENSG00000229606 LINC01718 - long intergenic non-protein coding RNA 1718 ncRNA chr4-967 chr4 48292612 48292856 + 5.44 0.000 Intergenic SVA_C|Retroposon|SVA -22896 NM_003215 7006 Hs.479670 NM_003215 ENSG00000135605 TEC PSCTK4 tec protein tyrosine kinase protein-coding chr19-1294 chr19 52514854 52515098 + 5.44 0.000 3' UTR (NM_001366182, exon 6 of 6) 3' UTR (NM_001366182, exon 6 of 6) -12680 NM_001321425 388558 Hs.729294 NM_001039886 ENSG00000198482 ZNF808 - zinc finger protein 808 protein-coding chr9-1222 chr9 77009343 77009587 + 5.44 0.000 Intergenic Intergenic -10190 NM_001013735 442425 Hs.553843 NM_001013735 ENSG00000204612 FOXB2 bA159H20.4 forkhead box B2 protein-coding chrX-497 chrX 79165184 79165428 + 5.44 0.000 Intergenic Intergenic -5666 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding chr7-1305 chr7 65847211 65847455 + 5.44 0.000 Intergenic AluYa8|SINE|Alu -25741 NM_001284342 154807 Hs.427232 NM_173517 ENSG00000196715 VKORC1L1 - vitamin K epoxide reductase complex subunit 1 like 1 protein-coding chr1-2232 chr1 11004311 11004555 + 5.44 0.000 Intergenic AluY|SINE|Alu -8189 NM_007375 23435 Hs.300624 NM_007375 ENSG00000120948 TARDBP ALS10|TDP-43 TAR DNA binding protein protein-coding ML143361.1-2 ML143361.1 288504 288748 + 5.44 0.000 NA NA NA NA chr2-1061 chr2 3590659 3590903 + 5.29 0.000 Intergenic SVA_D|Retroposon|SVA -4051 NM_001255983 78989 Hs.32603 NM_024027 ENSG00000118004 COLEC11 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 collectin subfamily member 11 protein-coding chr12-978 chr12 69586529 69586773 + 5.29 0.000 intron (NM_006431, intron 2 of 15) AluSx1|SINE|Alu 762 NM_001198842 10576 Hs.189772 NM_006431 ENSG00000166226 CCT2 99D8.1|CCT-beta|CCTB|HEL-S-100n|PRO1633|TCP-1-beta chaperonin containing TCP1 subunit 2 protein-coding chr3-1192 chr3 190529564 190529808 + 5.29 0.000 intron (NM_001364879, intron 1 of 10) AluSc|SINE|Alu 15601 NM_001364879 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding chr3-1307 chr3 53504868 53505112 + 5.29 0.000 intron (NM_001128840, intron 3 of 47) intron (NM_001128840, intron 3 of 47) 10379 NM_000720 776 Hs.476358 NM_000720 ENSG00000157388 CACNA1D CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD calcium voltage-gated channel subunit alpha1 D protein-coding chr2-1126 chr2 146698961 146699205 + 5.29 0.000 Intergenic AluSc8|SINE|Alu 112026 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo chr15-594 chr15 78945679 78945923 + 5.29 0.000 promoter-TSS (NM_004390) promoter-TSS (NM_004390) -703 NM_004390 1512 Hs.148641 NM_004390 ENSG00000103811 CTSH ACC-4|ACC-5|ACC4|ACC5|CPSB cathepsin H protein-coding chr10-1211 chr10 83856587 83856831 + 5.29 0.000 Intergenic AluSx1|SINE|Alu -179620 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA chr10-499 chr10 16945659 16945903 + 5.29 0.000 intron (NM_001081, intron 36 of 66) AluSz|SINE|Alu -128327 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding chr8-684 chr8 125978444 125978688 + 5.29 0.000 Intergenic Intergenic -27369 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA chr12-817 chr12 32086623 32086867 + 5.29 0.000 Intergenic AluSx4|SINE|Alu -20062 NM_001363603 636 Hs.505202 NM_001714 ENSG00000151746 BICD1 BICD|bic-D 1 BICD cargo adaptor 1 protein-coding chr11-1491 chr11 57575041 57575285 + 5.29 0.000 Intergenic AluSz|SINE|Alu -6833 NM_198183 9246 Hs.425777 NM_004223 ENSG00000156587 UBE2L6 RIG-B|UBCH8 ubiquitin conjugating enzyme E2 L6 protein-coding chr2-988 chr2 142998884 142999128 + 5.29 0.000 intron (NM_001199241, intron 11 of 14) AluSc5|SINE|Alu 121342 NM_001199241 8942 Hs.470126 NM_003937 ENSG00000115919 KYNU KYNUU|VCRL2 kynureninase protein-coding chr3-1442 chr3 150462521 150462765 + 5.29 0.000 non-coding (NR_130136, exon 5 of 5) non-coding (NR_130136, exon 5 of 5) 54345 NR_130136 9819 Hs.722470 NM_014779 ENSG00000196428 TSC22D2 TILZ4a|TILZ4b|TILZ4c TSC22 domain family member 2 protein-coding chr9-589 chr9 32037395 32037639 + 5.29 0.000 Intergenic L1P3|LINE|L1 -347086 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding chr10-952 chr10 130835201 130835445 + 5.29 0.000 Intergenic Intergenic 127345 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA chr4-718 chr4 89111280 89111524 + 5.29 0.000 Intergenic CpG -1415 NM_145715 166815 Hs.58924 NM_145715 ENSG00000180346 TIGD2 HEL106 tigger transposable element derived 2 protein-coding chr11-1163 chr11 71169634 71169878 + 5.14 0.000 intron (NM_012309, intron 1 of 24) AluSx1|SINE|Alu 55040 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding chr6-883 chr6 147778 148022 + 5.14 0.000 intron (NR_109817, intron 1 of 2) (CTAACC)n|Simple_repeat|Simple_repeat 259 NR_109817 441123 NR_109817 LINC00266-3 C6orf88|NCRNA00266-3|NCRNA00266C|dJ24O22.2 long intergenic non-protein coding RNA 266-3 ncRNA chr15-496 chr15 66428656 66428900 + 5.14 0.000 intron (NM_002755, intron 1 of 10) AluJb|SINE|Alu 41905 NM_002755 5604 Hs.145442 NM_002755 ENSG00000169032 MAP2K1 CFC3|MAPKK1|MEK1|MKK1|PRKMK1 mitogen-activated protein kinase kinase 1 protein-coding chr9-769 chr9 25183513 25183757 + 5.14 0.000 Intergenic AluJb|SINE|Alu 495223 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding chr5-992 chr5 16242558 16242802 + 5.14 0.000 Intergenic L1MA9|LINE|L1 62439 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA chr9-1173 chr9 8697192 8697436 + 5.14 0.000 intron (NM_130392, intron 1 of 30) intron (NM_130392, intron 1 of 30) 36632 NM_130391 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding chr17-508 chr17 62989661 62989905 + 5.14 0.000 intron (NM_025185, intron 1 of 25) AluSx3|SINE|Alu 23548 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding chr19-1184 chr19 9812353 9812597 + 5.14 0.000 intron (NM_001316936, intron 1 of 1) AluSz|SINE|Alu 6604 NM_001316939 54850 Hs.12439 NM_017703 ENSG00000127452 FBXL12 Fbl12 F-box and leucine rich repeat protein 12 protein-coding chr15-671 chr15 65465440 65465684 + 5.14 0.000 intron (NR_135485, intron 14 of 20) intron (NR_135485, intron 14 of 20) -42615 NM_020962 57722 Hs.458607 NM_020962 ENSG00000103742 IGDCC4 DDM36|NOPE immunoglobulin superfamily DCC subclass member 4 protein-coding chr12-1276 chr12 125566648 125566892 + 5.14 0.000 intron (NM_052907, intron 4 of 8) intron (NM_052907, intron 4 of 8) -55682 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding chr1-1566 chr1 176042433 176042677 + 5.14 0.000 intron (NM_022457, intron 14 of 19) AluSx1|SINE|Alu -74015 NR_002998 677679 NR_002998 ENSG00000252906 SCARNA3 HBI-100 small Cajal body-specific RNA 3 ncRNA chr13-388 chr13 52668708 52668952 + 5.14 0.000 intron (NM_001130912, intron 11 of 13) AluSz6|SINE|Alu 15994 NM_001130912 10910 Hs.281902 NM_006704 ENSG00000165416 SUGT1 SGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone protein-coding chr8-852 chr8 38708684 38708928 + 5.14 0.000 Intergenic AluSx1|SINE|Alu -19380 NR_148047 6867 Hs.279245 NM_006283 ENSG00000147526 TACC1 Ga55 transforming acidic coiled-coil containing protein 1 protein-coding chr1-1156 chr1 45143069 45143313 + 5.14 0.000 intron (NM_020883, intron 1 of 13) AluSx3|SINE|Alu 63414 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding chr1-2632 chr1 211440532 211440776 + 5.14 0.000 Intergenic AluSz6|SINE|Alu 52263 NM_183059 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding chr4-144 chr4 49149348 49149592 + 5.14 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 162828 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding chr19-1644 chr19 47823559 47823803 + 5.14 0.000 intron (NM_000554, intron 1 of 3) AluSx|SINE|Alu 1744 NM_000554 1406 Hs.617342 NM_000554 ENSG00000105392 CRX CORD2|CRD|LCA7|OTX3 cone-rod homeobox protein-coding chr3-1500 chr3 194617037 194617281 + 5.14 0.000 exon (NM_001166306, exon 6 of 10) exon (NM_001166306, exon 6 of 10) 16260 NM_138399 93109 Hs.478729 NM_138399 ENSG00000145014 TMEM44 - transmembrane protein 44 protein-coding chr9-497 chr9 137336535 137336779 + 5.14 0.000 intron (NM_017820, intron 17 of 21) AluSx1|SINE|Alu -34386 NM_001004354 441478 Hs.535075 NM_001004354 ENSG00000198435 NRARP - NOTCH regulated ankyrin repeat protein protein-coding chr20-384 chr20 56562859 56563103 + 5.14 0.000 Intergenic AluSg|SINE|Alu -14582 NR_136537 105372682 Hs.517135 NR_136537 ENSG00000225657 LINC01716 - long intergenic non-protein coding RNA 1716 ncRNA chr1-1223 chr1 212202236 212202480 + 5.14 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 32378 NR_125983 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA chr7-1233 chr7 21198035 21198279 + 4.99 0.000 Intergenic AluSq2|SINE|Alu -229926 NM_001326542 6671 Hs.88013 NM_003112 ENSG00000105866 SP4 HF1B|SPR-1 Sp4 transcription factor protein-coding chr17-1023 chr17 65521590 65521834 + 4.99 0.000 Intergenic AluSq2|SINE|Alu 39936 NM_004655 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding chr18-313 chr18 21655170 21655414 + 4.99 0.000 intron (NM_138340, intron 8 of 8) AluSx|SINE|Alu 8922 NM_001308257 171586 Hs.397978 NM_138340 ENSG00000158201 ABHD3 LABH3 abhydrolase domain containing 3 protein-coding chr6-1047 chr6 111360340 111360584 + 4.99 0.000 intron (NM_001286431, intron 19 of 34) intron (NM_001286431, intron 19 of 34) 101123 NM_153369 91749 Hs.400572 NM_153369 ENSG00000173214 MFSD4B KIAA1919|NaGLT1 major facilitator superfamily domain containing 4B protein-coding chr19-1592 chr19 36282184 36282428 + 4.99 0.000 Intergenic (TC)n|Simple_repeat|Simple_repeat -29037 NR_029389 100134317 Hs.466550 NR_029389 LOC100134317 - uncharacterized LOC100134317 ncRNA chr1-624 chr1 180794 181038 + 4.99 0.000 Intergenic (ACCCTA)n|Simple_repeat|Simple_repeat -1472 NR_148357 102725121 Hs.712940 NR_148357 LOC102725121 - DEAD/H-box helicase 11 pseudogene pseudo chr17-931 chr17 10651060 10651304 + 4.99 0.000 intron (NM_002470, intron 5 of 40) AluSx3|SINE|Alu 6127 NM_002470 4621 Hs.440895 NM_002470 ENSG00000109063 MYH3 CPSKF1A|CPSKF1B|DA2A|DA2B|DA2B3|DA8|HEMHC|MYHC-EMB|MYHSE1|SMHCE myosin heavy chain 3 protein-coding chr7-1439 chr7 147463919 147464163 + 4.99 0.000 intron (NM_014141, intron 9 of 22) intron (NM_014141, intron 9 of 22) -85920 NR_031645 100313895 NR_031645 ENSG00000221442 MIR548F4 MIR548F-4|MIRN548F4|hsa-mir-548f-4 microRNA 548f-4 ncRNA chr15-309 chr15 89856573 89856817 + 4.99 0.000 intron (NR_023361, intron 5 of 6) AluSx3|SINE|Alu -5974 NR_049817 100847059 NR_049817 ENSG00000264966 MIR5094 - microRNA 5094 ncRNA ML143345.1-4 ML143345.1 17970 18214 + 4.99 0.000 NA NA NA NA chr11-1123 chr11 64171595 64171839 + 4.99 0.000 Intergenic SVA_F|Retroposon|SVA -5604 NM_014067 28992 Hs.602898 NM_014067 ENSG00000133315 MACROD1 LRP16 mono-ADP ribosylhydrolase 1 protein-coding chr2-1765 chr2 96340547 96340791 + 4.99 0.000 intron (NM_001281712, intron 1 of 16) AluSq2|SINE|Alu 4903 NM_001281710 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding chr9-1106 chr9 120496430 120496674 + 4.99 0.000 intron (NR_073558, intron 12 of 37) SVA_F|Retroposon|SVA 83615 NR_073557 55755 Hs.269560 NM_018249 ENSG00000136861 CDK5RAP2 C48|Cep215|MCPH3 CDK5 regulatory subunit associated protein 2 protein-coding chr4-525 chr4 61336736 61336980 + 4.99 0.000 intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 134686 NM_001371342 KI270733.1-20 KI270733.1 161647 161891 + 4.99 0.000 NA NA NA NA chr12-875 chr12 95769743 95769987 + 4.84 0.000 intron (NM_001329701, intron 2 of 9) AluSq2|SINE|Alu 20330 NM_001329702 59277 Hs.201034 NM_021229 ENSG00000074527 NTN4 PRO3091 netrin 4 protein-coding chr13-280 chr13 25512528 25512772 + 4.84 0.000 intron (NM_016529, intron 2 of 36) SVA_D|Retroposon|SVA 43876 NM_001313741 51761 Hs.444957 NM_016529 ENSG00000132932 ATP8A2 ATP|ATPIB|CAMRQ4|IB|ML-1 ATPase phospholipid transporting 8A2 protein-coding chr9-1076 chr9 81805797 81806041 + 4.84 0.000 Intergenic AluSg|SINE|Alu -107518 NR_026851 347127 Hs.215235 NM_198509 ENSG00000240632 SPATA31D5P FAM75D5|FAM75D5P SPATA31 subfamily D member 5, pseudogene pseudo chr21-165 chr21 29774335 29774579 + 4.84 0.000 intron (NM_000830, intron 1 of 16) AluSg4|SINE|Alu 26282 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA chr11-1682 chr11 132662269 132662513 + 4.84 0.000 intron (NM_001319104, intron 1 of 6) (TTTATT)n|Simple_repeat|Simple_repeat 281246 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding chr6-1036 chr6 103369200 103369444 + 4.84 0.000 Intergenic L1PA8|LINE|L1 1490224 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding chr6-1043 chr6 109973254 109973498 + 4.84 0.000 Intergenic AluSz6|SINE|Alu -4880 NM_001286099 2830 Hs.46332 NM_005284 ENSG00000146360 GPR6 - G protein-coupled receptor 6 protein-coding chr19-1067 chr19 7269117 7269361 + 4.84 0.000 intron (NM_001079817, intron 1 of 20) intron (NM_001079817, intron 1 of 20) 25175 NM_000208 3643 Hs.465744 NM_000208 ENSG00000171105 INSR CD220|HHF5 insulin receptor protein-coding chr9-1271 chr9 100154117 100154361 + 4.84 0.000 intron (NR_134606, intron 3 of 16) AluJb|SINE|Alu 54996 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding chr9-789 chr9 96640412 96640656 + 4.84 0.000 3' UTR (NM_153698, exon 6 of 6) 3' UTR (NM_153698, exon 6 of 6) 14783 NM_153698 195827 Hs.44640 NM_153698 ENSG00000158122 PRXL2C AAED1|C9orf21 peroxiredoxin like 2C protein-coding ML143369.1-1 ML143369.1 87145 87333 + 4.84 0.000 NA NA NA NA chr16-472 chr16 3258835 3259079 + 4.84 0.000 Intergenic AluJo|SINE|Alu -2330 NM_000243 4210 Hs.632221 NM_000243 ENSG00000103313 MEFV FMF|MEF|TRIM20 MEFV innate immuity regulator, pyrin protein-coding chr3-648 chr3 22094984 22095228 + 4.84 0.000 Intergenic AluJr4|SINE|Alu 137967 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA chr9-762 chr9 2866040 2866284 + 4.84 0.000 Intergenic AluSx|SINE|Alu -22067 NM_014878 9933 Hs.493309 NM_014878 ENSG00000080608 PUM3 HA-8|HLA-HA8|KIAA0020|PEN|PUF-A|PUF6|XTP5 pumilio RNA binding family member 3 protein-coding chr18-205 chr18 51435030 51435274 + 4.84 0.000 intron (NR_040074, intron 1 of 2) (T)n|Simple_repeat|Simple_repeat 43110 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA chr11-1276 chr11 41093986 41094230 + 4.84 0.000 intron (NM_001258419, intron 1 of 6) AluSc8|SINE|Alu 365528 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding chr18-228 chr18 25635904 25636148 + 4.84 0.000 Intergenic Intergenic -283860 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr9-898 chr9 78101112 78101356 + 4.84 0.000 Intergenic AluSc|SINE|Alu -69423 NM_002072 2776 Hs.269782 NM_002072 ENSG00000156052 GNAQ CMC1|G-ALPHA-q|GAQ|SWS G protein subunit alpha q protein-coding chr1-2515 chr1 154478225 154478469 + 4.84 0.000 Intergenic Intergenic -23872 NM_001098475 126668 Hs.387671 NM_182499 ENSG00000163239 TDRD10 - tudor domain containing 10 protein-coding chr4-947 chr4 38092657 38092901 + 4.84 0.000 intron (NM_001253912, intron 15 of 20) MER6A|DNA|TcMar-Tigger -17402 NM_001253913 23216 Hs.176503 NM_015173 ENSG00000065882 TBC1D1 TBC|TBC1 TBC1 domain family member 1 protein-coding chrX-428 chrX 23956974 23957218 + 4.84 0.000 Intergenic AluSx1|SINE|Alu 49090 NM_001169574 254158 Hs.351265 NM_152761 ENSG00000165182 CXorf58 - chromosome X open reading frame 58 protein-coding chr9-1117 chr9 126019822 126020066 + 4.84 0.000 Intergenic Tigger8|DNA|TcMar-Tigger 255971 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA chr7-1412 chr7 129978816 129979060 + 4.84 0.000 Intergenic MLT1L|LTR|ERVL-MaLR -25978 NM_003344 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding chr1-2629 chr1 207934203 207934447 + 4.84 0.000 Intergenic AluSx|SINE|Alu -23200 NM_001025109 947 Hs.374990 NM_001773 ENSG00000174059 CD34 - CD34 molecule protein-coding chr2-872 chr2 214062322 214062566 + 4.84 0.000 intron (NR_047660, intron 12 of 14) AluSz|SINE|Alu 304377 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA chr3-1433 chr3 142384162 142384406 + 4.84 0.000 intron (NM_019001, intron 21 of 41) AluY|SINE|Alu 63753 NM_019001 54464 Hs.435103 NM_019001 ENSG00000114127 XRN1 SEP1 5'-3' exoribonuclease 1 protein-coding chr2-1542 chr2 200243759 200244003 + 4.84 0.000 Intergenic Intergenic -61998 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding chr12-515 chr12 48332623 48332867 + 4.84 0.000 Intergenic SVA_F|Retroposon|SVA 3765 NM_181788 341567 Hs.155833 NM_181788 ENSG00000187166 H1FNT H1.7|H1T2 H1 histone family member N, testis specific protein-coding chr8-734 chr8 30299053 30299297 + 4.69 0.000 Intergenic AluSg|SINE|Alu -85326 NM_001008712 11030 Hs.334587 NM_006867 ENSG00000157110 RBPMS HERMES RNA binding protein, mRNA processing factor protein-coding KQ031384.1-2 KQ031384.1 451041 451285 + 4.69 0.000 NA NA NA NA chr2-1695 chr2 47355618 47355862 + 4.69 0.000 Intergenic AluJb|SINE|Alu -10666 NR_110207 101927043 Hs.515976 NR_110207 ENSG00000234690 EPCAM-DT - EPCAM divergent transcript ncRNA chr2-1872 chr2 177835876 177836120 + 4.69 0.000 intron (NM_001077197, intron 7 of 20) LTR12C|LTR|ERV1 52758 NM_001077196 50940 Hs.570273 NM_016953 ENSG00000128655 PDE11A PPNAD2 phosphodiesterase 11A protein-coding chr21-200 chr21 23356876 23357120 + 4.69 0.000 Intergenic FLAM_A|SINE|Alu 27837 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA chr21-166 chr21 31477345 31477589 + 4.69 0.000 intron (NM_003253, intron 1 of 28) intron (NM_003253, intron 1 of 28) 81620 NM_001353690 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding chr12-735 chr12 28280706 28280950 + 4.69 0.000 intron (NM_001352082, intron 4 of 13) AluJr|SINE|Alu -90090 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA KI270776.1-3 KI270776.1 140080 140324 + 4.69 0.000 NA NA NA NA chr9-1063 chr9 22749281 22749525 + 4.69 0.000 intron (NR_038977, intron 4 of 5) AluSc|SINE|Alu 103203 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA chr10-759 chr10 122309658 122309902 + 4.69 0.000 intron (NM_001318189, intron 10 of 15) AluSz6|SINE|Alu 38484 NM_144587 118663 Hs.422466 NM_144587 ENSG00000138152 BTBD16 C10orf87 BTB domain containing 16 protein-coding chr3-872 chr3 129785820 129786064 + 4.69 0.000 intron (NM_001349271, intron 2 of 4) AluSz6|SINE|Alu 8670 NM_001349273 23023 Hs.477547 NM_015008 ENSG00000172765 TMCC1 - transmembrane and coiled-coil domain family 1 protein-coding chr12-999 chr12 118225134 118225378 + 4.69 0.000 intron (NM_001346490, intron 10 of 21) AluSq2|SINE|Alu -34721 NM_001346494 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding chr1-1992 chr1 13328668 13328912 + 4.69 0.000 Intergenic SVA_E|Retroposon|SVA 13209 NM_001098376 653619 Hs.631873 NM_001098376 ENSG00000204501 PRAMEF15 - PRAME family member 15 protein-coding chr21-147 chr21 31785100 31785344 + 4.69 0.000 Intergenic (CCA)n|Simple_repeat|Simple_repeat -53104 NM_001145444 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding chr3-827 chr3 32929268 32929512 + 4.69 0.000 Intergenic AluY|SINE|Alu -22254 NM_005508 1233 Hs.184926 NM_005508 ENSG00000183813 CCR4 CC-CKR-4|CD194|CKR4|CMKBR4|ChemR13|HGCN:14099|K5-5 C-C motif chemokine receptor 4 protein-coding chr7-1313 chr7 71020482 71020726 + 4.69 0.000 Intergenic AluSz6|SINE|Alu -111540 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding chr11-1334 chr11 73886677 73886921 + 4.69 0.000 intron (NM_025155, intron 2 of 11) MSTB1|LTR|ERVL-MaLR -1982 NM_001363556 80227 Hs.525017 NM_025155 ENSG00000175575 PAAF1 PAAF|Rpn14|WDR71 proteasomal ATPase associated factor 1 protein-coding chr9-893 chr9 71587751 71587995 + 4.69 0.000 Intergenic MLT1J1|LTR|ERVL-MaLR -140902 NM_001366141 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding chr7-588 chr7 102578918 102579162 + 4.69 0.000 TTS (NM_006989) TTS (NM_006989) -6419 NM_001097615 548644 Hs.610255 NM_001015884 ENSG00000168255 POLR2J3 POLR2J2|RPB11b1|RPB11b2 RNA polymerase II subunit J3 protein-coding chr16-1172 chr16 71638987 71639231 + 4.69 0.000 intron (NM_001017967, intron 2 of 2) AluSq2|SINE|Alu 12925 NM_001017967 91862 Hs.513706 NM_052858 ENSG00000140832 MARVELD3 MARVD3|MRVLDC3 MARVEL domain containing 3 protein-coding chr15-738 chr15 89912856 89913100 + 4.69 0.000 promoter-TSS (NM_182616) promoter-TSS (NM_182616) -26 NM_001199058 100526783 NM_001199058 ENSG00000250021 ARPIN-AP3S2 ARPIN|C15orf38|C15orf38-AP3S2 ARPIN-AP3S2 readthrough protein-coding chr8-625 chr8 40668339 40668583 + 4.54 0.000 intron (NM_001135731, intron 4 of 5) AluSz|SINE|Alu 229365 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding chr18-177 chr18 25529903 25530147 + 4.54 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -177859 NM_015461 25925 Hs.116935 NM_015461 ENSG00000198795 ZNF521 EHZF|Evi3 zinc finger protein 521 protein-coding chr2-1678 chr2 42330511 42330755 + 4.54 0.000 3' UTR (NM_019063, exon 23 of 23) 3' UTR (NM_019063, exon 23 of 23) 29405 NR_134948 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding chr20-241 chr20 64287235 64287479 + 4.54 0.000 Intergenic (AGGGTT)n|Simple_repeat|Simple_repeat -3028 NR_040415 140849 Hs.745565 NR_040415 LINC00266-1 C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3 long intergenic non-protein coding RNA 266-1 ncRNA chrX-198 chrX 43708513 43708757 + 4.54 0.000 intron (NM_001270458, intron 4 of 15) intron (NM_001270458, intron 4 of 15) 53728 NM_000240 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding chr18-150 chr18 66547541 66547785 + 4.54 0.000 intron (NM_001271028, intron 5 of 9) AluYa5|SINE|Alu 56427 NR_073130 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding chr3-1041 chr3 157197869 157198113 + 4.54 0.000 Intergenic AluSx|SINE|Alu -37231 NM_020307 57018 Hs.4859 NM_020307 ENSG00000163660 CCNL1 ANIA6A|BM-001|PRO1073|ania-6a cyclin L1 protein-coding chr2-1351 chr2 192351245 192351489 + 4.54 0.000 Intergenic AluJo|SINE|Alu -156434 NM_001305145 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding chrX-489 chrX 71589239 71589483 + 4.54 0.000 intron (NM_052957, intron 2 of 12) FAM|SINE|Alu 11337 NM_052957 93953 Hs.135167 NM_052957 ENSG00000147174 GCNA ACRC|NAAR1 germ cell nuclear acidic peptidase protein-coding chr1-1952 chr1 235959579 235959823 + 4.54 0.000 Intergenic AluSg7|SINE|Alu -75988 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding chr8-810 chr8 19313918 19314162 + 4.54 0.000 promoter-TSS (NM_001174159) promoter-TSS (NM_001174159) 64 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding chr5-806 chr5 142487105 142487349 + 4.54 0.000 Intergenic AluSq|SINE|Alu 134107 NM_001144892 2246 Hs.483635 NM_000800 ENSG00000113578 FGF1 AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1 fibroblast growth factor 1 protein-coding chr10-1107 chr10 25654845 25655089 + 4.54 0.000 intron (NR_108067, intron 2 of 4) AluJr|SINE|Alu 3255 NR_108069 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA chr16-1057 chr16 4978299 4978543 + 4.54 0.000 intron (NM_014692, intron 2 of 15) AluYa5|SINE|Alu 20091 NM_014692 9717 Hs.512856 NM_014692 ENSG00000103184 SEC14L5 PRELID4B SEC14 like lipid binding 5 protein-coding chr15-546 chr15 41382625 41382869 + 4.38 0.000 Intergenic SVA_F|Retroposon|SVA 19749 NR_045620 51103 Hs.106529 NM_016013 ENSG00000137806 NDUFAF1 CGI-65|CGI65|CIA30|MC1DN11 NADH:ubiquinone oxidoreductase complex assembly factor 1 protein-coding chr1-1990 chr1 11986470 11986714 + 4.38 0.000 intron (NM_014874, intron 2 of 18) AluSx1|SINE|Alu 6411 NM_001127660 9927 Hs.376681 NM_014874 ENSG00000116688 MFN2 CMT2A|CMT2A2|CMT2A2A|CMT2A2B|CPRP1|HMSN6A|HSG|MARF mitofusin 2 protein-coding chr5-458 chr5 54069922 54070166 + 4.38 0.000 intron (NM_019087, intron 4 of 4) MSTC|LTR|ERVL-MaLR -118445 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA chr1-1597 chr1 232823139 232823383 + 4.38 0.000 Intergenic AluSx1|SINE|Alu 18369 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding chr12-883 chr12 102722657 102722901 + 4.38 0.000 Intergenic Intergenic 101620 NR_033855 283432 Hs.382110 NR_033855 ENSG00000258169 LINC00485 - long intergenic non-protein coding RNA 485 ncRNA chr10-567 chr10 7456969 7457213 + 4.38 0.000 Intergenic AluSc8|SINE|Alu -45605 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding chr15-627 chr15 41244056 41244300 + 4.23 0.000 intron (NM_007236, intron 2 of 6) AluSx1|SINE|Alu 12910 NM_007236 11261 Hs.406234 NM_007236 ENSG00000187446 CHP1 CHP|SLC9A1BP|SPAX9|Sid470p|p22|p24 calcineurin like EF-hand protein 1 protein-coding chr15-564 chr15 60542460 60542704 + 4.23 0.000 intron (NM_134261, intron 2 of 10) (AC)n|Simple_repeat|Simple_repeat 49944 NM_134262 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding chr6-640 chr6 1252225 1252469 + 4.23 0.000 Intergenic AluSq|SINE|Alu -59751 NM_033260 94234 Hs.591352 NM_033260 ENSG00000164379 FOXQ1 HFH1 forkhead box Q1 protein-coding chr19-1401 chr19 54133788 54134032 + 4.23 0.000 Intergenic (TCCC)n|Simple_repeat|Simple_repeat -3852 NM_014516 4849 Hs.343571 NM_014516 ENSG00000088038 CNOT3 LENG2|NOT3|NOT3H CCR4-NOT transcription complex subunit 3 protein-coding chr4-556 chr4 151695805 151696049 + 4.23 0.000 intron (NM_001363341, intron 9 of 11) AluJr|SINE|Alu 65080 NM_004564 5188 Hs.119316 NM_004564 ENSG00000059691 GATB HSPC199|PET112|PET112L glutamyl-tRNA amidotransferase subunit B protein-coding chr4-678 chr4 25894713 25894957 + 4.23 0.000 Intergenic AluJr|SINE|Alu -19357 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding chr14-696 chr14 48325178 48325422 + 4.23 0.000 Intergenic AluSx|SINE|Alu -530286 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA chr1-1095 chr1 201935984 201936228 + 4.23 0.000 intron (NM_012134, intron 1 of 2) AluSq2|SINE|Alu 10442 NM_012134 25802 Hs.519075 NM_012134 ENSG00000163431 LMOD1 1D|64kD|D1|SM-LMOD|SMLMOD leiomodin 1 protein-coding chr15-742 chr15 90848440 90848684 + 4.08 0.000 Intergenic AluSp|SINE|Alu -20026 NM_002569 5045 Hs.513153 NM_002569 ENSG00000140564 FURIN FUR|PACE|PCSK3|SPC1 furin, paired basic amino acid cleaving enzyme protein-coding chr5-873 chr5 34306356 34306600 + 4.08 0.000 Intergenic SVA_F|Retroposon|SVA -61754 NR_146599 114899 Hs.171929 NM_030945 ENSG00000082196 C1QTNF3 C1ATNF3|CORCS|CORS|CORS-26|CORS26|CTRP3 C1q and TNF related 3 protein-coding chr22-634 chr22 26773147 26773391 + 4.08 0.000 intron (NR_110543, intron 2 of 5) SVA_F|Retroposon|SVA -86942 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA chr5-682 chr5 134063986 134064230 + 4.08 0.000 Intergenic AluJo|SINE|Alu -50573 NM_003202 6932 Hs.573153 NM_003202 ENSG00000081059 TCF7 TCF-1 transcription factor 7 protein-coding chr10-788 chr10 11815770 11816014 + 4.08 0.000 Intergenic Intergenic -7464 NM_153256 254427 Hs.435775 NM_153256 ENSG00000148426 PROSER2 C10orf47 proline and serine rich 2 protein-coding KI270870.1-1 KI270870.1 144453 144697 + 4.08 0.000 NA NA NA NA chr4-771 chr4 180484671 180484915 + 4.08 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat 674356 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA chr16-618 chr16 1803467 1803711 + 4.08 0.000 Intergenic AluYh3|SINE|Alu -8681 NR_027389 3483 Hs.839 NM_004970 ENSG00000099769 IGFALS ACLSD|ALS insulin like growth factor binding protein acid labile subunit protein-coding chr1-1898 chr1 202906342 202906586 + 4.08 0.000 intron (NM_021633, intron 6 of 11) AluSq|SINE|Alu -17315 NM_002871 5877 Hs.90875 NM_002871 ENSG00000183155 RABIF MSS4|RASGFR3|RASGRF3 RAB interacting factor protein-coding chr7-436 chr7 141431962 141432206 + 4.08 0.000 intron (NM_001195278, intron 2 of 3) L4_A_Mam|LINE|RTE-X -119326 NM_018238 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding chr10-1093 chr10 13997516 13997760 + 3.93 0.000 intron (NM_018027, intron 2 of 24) AluJb|SINE|Alu 10912 NM_001318336 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr11-1016 chr11 73670802 73671046 + 3.93 0.000 Intergenic AluSz6|SINE|Alu 22011 NM_001130036 58473 Hs.445489 NM_021200 ENSG00000021300 PLEKHB1 KPL1|PHR1|PHRET1 pleckstrin homology domain containing B1 protein-coding chrX-502 chrX 97974963 97975207 + 3.93 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -410550 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA chr18-164 chr18 47706080 47706324 + 3.93 0.000 Intergenic L1PA2|LINE|L1 224457 NM_005901 4087 Hs.12253 NM_005901 ENSG00000175387 SMAD2 JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2 SMAD family member 2 protein-coding chrX-494 chrX 74167239 74167483 + 3.93 0.000 intron (NR_028379, intron 5 of 6) SVA_E|Retroposon|SVA 51100 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA chrX-412 chrX 6700795 6701039 + 3.93 0.000 Intergenic AluJo|SINE|Alu -165799 NM_016379 51481 Hs.170076 NM_016379 ENSG00000169059 VCX3A VCX-8r|VCX-A|VCX3|VCX8R|VCXA variable charge X-linked 3A protein-coding chr10-998 chr10 59641347 59641591 + 3.78 0.000 Intergenic L1M2|LINE|L1 68422 NM_001323980 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding chr9-1303 chr9 118177431 118177675 + 3.78 0.000 Intergenic Intergenic 473150 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding chr1-2676 chr1 235358534 235358778 + 3.78 0.000 Intergenic AluSx|SINE|Alu -8704 NM_001287802 6905 Hs.744998 NM_003193 ENSG00000284770 TBCE HRD|KCS|KCS1|PEAMO|pac2 tubulin folding cofactor E protein-coding chr16-451 chr16 88192932 88193176 + 3.78 0.000 Intergenic Intergenic -1227 NR_110944 101928880 Hs.634835 NR_110944 ENSG00000260420 LINC02182 LA16c-444G7.2 long intergenic non-protein coding RNA 2182 ncRNA chr2-1772 chr2 99512961 99513205 + 3.78 0.000 Intergenic AluSx1|SINE|Alu -23066 NR_135653 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding chr19-1191 chr19 10882433 10882677 + 3.78 0.000 intron (NM_001370089, intron 1 of 14) AluSz|SINE|Alu 10126 NM_001370089 10498 Hs.323213 NM_199141 ENSG00000142453 CARM1 PRMT4 coactivator associated arginine methyltransferase 1 protein-coding chr2-1666 chr2 37007227 37007471 + 3.78 0.000 intron (NM_019024, intron 28 of 35) AluSx3|SINE|Alu -40813 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding chr14-559 chr14 74162356 74162600 + 3.63 0.000 intron (NM_001024674, intron 5 of 5) AluSz|SINE|Alu -76971 NM_182894 338917 Hs.449771 NM_182894 ENSG00000119614 VSX2 CHX10|HOX10|MCOP2|MCOPCB3|RET1 visual system homeobox 2 protein-coding chr11-1225 chr11 120507622 120507866 + 3.63 0.000 Intergenic AluSp|SINE|Alu -4002 NM_014619 2900 Hs.538738 NM_014619 ENSG00000149403 GRIK4 EAA1|GRIK|GluK4|KA1 glutamate ionotropic receptor kainate type subunit 4 protein-coding chr4-920 chr4 8934459 8934703 + 3.63 0.000 Intergenic AluSx|SINE|Alu -62742 NM_018942 3166 Hs.104134 NM_018942 ENSG00000215612 HMX1 H6|NKX5-3 H6 family homeobox 1 protein-coding chr2-1352 chr2 195366803 195367047 + 3.63 0.000 Intergenic AluSx1|SINE|Alu -290033 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding chr9-1273 chr9 103687199 103687443 + 3.63 0.000 Intergenic AluSg|SINE|Alu -312388 NR_109803 101928523 NR_109803 ENSG00000285483 LOC101928523 - uncharacterized LOC101928523 ncRNA chr2-1819 chr2 128057166 128057410 + 3.63 0.000 Intergenic LTR49-int|LTR|ERV1 -29229 NM_001330301 79595 Hs.32995 NM_024545 ENSG00000136715 SAP130 - Sin3A associated protein 130 protein-coding chr16-980 chr16 87222215 87222459 + 3.63 0.000 intron (NR_110939, intron 2 of 2) (ATCACC)n|Simple_repeat|Simple_repeat 10222 NR_110939 101928708 Hs.585717 NR_110939 ENSG00000261095 LOC101928708 - uncharacterized LOC101928708 ncRNA chr2-1847 chr2 151285462 151285706 + 3.63 0.000 intron (NM_004688, intron 1 of 7) AluSx|SINE|Alu 4084 NM_004688 9111 Hs.54483 NM_004688 ENSG00000123609 NMI - N-myc and STAT interactor protein-coding chr7-1266 chr7 41601654 41601898 + 3.63 0.000 Intergenic AluSz|SINE|Alu -92143 NR_027118 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA chr14-563 chr14 76367414 76367658 + 3.48 0.000 Intergenic AluJb|SINE|Alu -3811 NM_004452 2103 Hs.435845 NM_004452 ENSG00000119715 ESRRB DFNB35|ERR2|ERRb|ESRL2|NR3B2 estrogen related receptor beta protein-coding chr3-1361 chr3 106192179 106192423 + 3.48 0.000 Intergenic Intergenic -322900 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding chrX-545 chrX 130359356 130359600 + 3.48 0.000 intron (NM_001282197, intron 8 of 11) intron (NM_001282197, intron 8 of 11) 19559 NR_104107 9016 Hs.194686 NM_003951 ENSG00000102078 SLC25A14 BMCP1|UCP5 solute carrier family 25 member 14 protein-coding chrY-35 chrY 10682429 10682673 + 3.48 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 771753 NR_003593 100101121 Hs.522846 NR_003593 ENSG00000250204 TTTY23B TTTY23 testis-specific transcript, Y-linked 23B ncRNA chr1-2433 chr1 88081060 88081304 + 3.33 0.000 Intergenic (T)n|Simple_repeat|Simple_repeat -602962 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding chr15-409 chr15 101980992 101981176 + 3.33 0.000 Intergenic (GGTTAG)n|Simple_repeat|Simple_repeat -1991 NR_034090 100288486 Hs.644359 NR_034090 ENSG00000248472 DDX11L9 - DEAD/H-box helicase 11 like 9 pseudo chr15-652 chr15 56000943 56001187 + 3.33 0.000 Intergenic AluSx3|SINE|Alu -7453 NM_006154 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding chr5-1197 chr5 179601582 179601826 + 3.33 0.000 intron (NR_110560, intron 3 of 8) AluSc|SINE|Alu 2037 NR_110560 101928445 Hs.663255 NR_110560 ENSG00000244945 LOC101928445 - uncharacterized LOC101928445 ncRNA chr3-1024 chr3 136102205 136102449 + 3.33 0.000 intron (NM_181897, intron 10 of 12) intron (NM_181897, intron 10 of 12) 79585 NM_181897 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding chr10-975 chr10 13884049 13884293 + 3.33 0.000 intron (NM_018027, intron 2 of 24) (AC)n|Simple_repeat|Simple_repeat 87725 NM_001318337 55691 Hs.330463 NM_018027 ENSG00000151474 FRMD4A CCAFCA|FRMD4|bA295P9.4 FERM domain containing 4A protein-coding chr1-1752 chr1 46375633 46375877 + 3.33 0.000 Intergenic AluJb|SINE|Alu -18562 NM_001441 2166 Hs.720143 NM_001441 ENSG00000117480 FAAH FAAH-1|PSAB fatty acid amide hydrolase protein-coding chr16-1184 chr16 81035942 81036186 + 3.33 0.000 exon (NM_015251, exon 1 of 4) exon (NM_015251, exon 1 of 4) 222 NM_015251 23300 Hs.16349 NM_015251 ENSG00000166454 ATMIN ASCIZ|ZNF822 ATM interactor protein-coding chr1-2205 chr1 6849923 6850167 + 3.18 0.000 intron (NM_001349608, intron 2 of 21) AluSz6|SINE|Alu 64591 NM_001349610 23261 Hs.397705 NM_015215 ENSG00000171735 CAMTA1 CANPMR calmodulin binding transcription activator 1 protein-coding chr1-2650 chr1 221623598 221623842 + 3.18 0.000 Intergenic AluSx|SINE|Alu 113180 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding chr1-1457 chr1 240780257 240780501 + 3.18 0.000 intron (NM_001350116, intron 16 of 16) AluSz|SINE|Alu -168224 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding KI270736.1-8 KI270736.1 115475 115719 + 3.02 0.000 NA NA NA NA chr19-1396 chr19 51377794 51378038 + 2.87 0.000 Intergenic AluJb|SINE|Alu -5262 NM_001363693 4818 Hs.10306 NM_005601 ENSG00000105374 NKG7 GIG1|GMP-17|p15-TIA-1 natural killer cell granule protein 7 protein-coding chr4-456 chr4 49139609 49139853 + 2.57 0.000 Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 153089 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding