Sample HG00512
passed wasp filtering:
882031 passed_WASP_filtering_vW_1
VW_Tagged reads:
921021 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
882031
reads to remap:
920961 reads_to_remap_unique
reads to keep:
882208 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
920961
Reads unique to STAR_WASP:
921021
Reads unique to WASP:
920961
Reads that passed WASP filtering - common to both STAR_WASP and WASP
881972
Reads unique to STAR_WAP:
882031
Reads unique to WASP:
882208
——————————————————————————————
Sample HG00513
passed wasp filtering:
1044177 passed_WASP_filtering_vW_1
VW_Tagged reads:
1085078 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1044177
reads to remap:
1083180 reads_to_remap_unique
reads to keep:
1044182 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1083180
Reads unique to STAR_WASP:
1085078
Reads unique to WASP:
1083180
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1043669
Reads unique to STAR_WAP:
1044177
Reads unique to WASP:
1044182
——————————————————————————————
Sample HG00731
passed wasp filtering:
939422 passed_WASP_filtering_vW_1
VW_Tagged reads:
972051 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
939422
reads to remap:
972021 reads_to_remap_unique
reads to keep:
939593 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
972021
Reads unique to STAR_WASP:
972051
Reads unique to WASP:
972021
Reads that passed WASP filtering - common to both STAR_WASP and WASP
939389
Reads unique to STAR_WAP:
939422
Reads unique to WASP:
939593
——————————————————————————————
Sample HG00732
passed wasp filtering:
1275988 passed_WASP_filtering_vW_1
VW_Tagged reads:
1330049 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1275988
reads to remap:
1328751 reads_to_remap_unique
reads to keep:
1275852 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1328751
Reads unique to STAR_WASP:
1330049
Reads unique to WASP:
1328751
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1275510
Reads unique to STAR_WAP:
1275988
Reads unique to WASP:
1275852
——————————————————————————————
Sample HG00733
passed wasp filtering:
1596270 passed_WASP_filtering_vW_1
VW_Tagged reads:
1663788 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1596270
reads to remap:
1663750 reads_to_remap_unique
reads to keep:
1596804 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1663750
Reads unique to STAR_WASP:
1663788
Reads unique to WASP:
1663750
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1596228
Reads unique to STAR_WAP:
1596270
Reads unique to WASP:
1596804
——————————————————————————————
Sample NA12878_Nucleus_nonPolyA
passed wasp filtering:
5689022 passed_WASP_filtering_vW_1
VW_Tagged reads:
5779090 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
5689022
reads to remap:
5773527 reads_to_remap_unique
reads to keep:
5689966 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
5773527
Reads unique to STAR_WASP:
5779090
Reads unique to WASP:
5773527
Reads that passed WASP filtering - common to both STAR_WASP and WASP
5686230
Reads unique to STAR_WAP:
5689022
Reads unique to WASP:
5689966
——————————————————————————————
Sample NA12878_Nucleus_nonPolyA_Rep
passed wasp filtering:
6131203 passed_WASP_filtering_vW_1
VW_Tagged reads:
6251885 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
6131203
reads to remap:
6246685 reads_to_remap_unique
reads to keep:
6136356 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
6246685
Reads unique to STAR_WASP:
6251885
Reads unique to WASP:
6246685
Reads that passed WASP filtering - common to both STAR_WASP and WASP
6128285
Reads unique to STAR_WAP:
6131203
Reads unique to WASP:
6136356
——————————————————————————————
Sample NA12878_Nucleus_PolyA
passed wasp filtering:
7492907 passed_WASP_filtering_vW_1
VW_Tagged reads:
7653592 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
7492907
reads to remap:
7637928 reads_to_remap_unique
reads to keep:
7489644 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
7637928
Reads unique to STAR_WASP:
7653592
Reads unique to WASP:
7637928
Reads that passed WASP filtering - common to both STAR_WASP and WASP
7485118
Reads unique to STAR_WAP:
7492907
Reads unique to WASP:
7489644
——————————————————————————————
Sample NA12878_Nucleus_PolyA_Rep
passed wasp filtering:
6951141 passed_WASP_filtering_vW_1
VW_Tagged reads:
7090000 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
6951141
reads to remap:
7079643 reads_to_remap_unique
reads to keep:
6948869 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
7079643
Reads unique to STAR_WASP:
7090000
Reads unique to WASP:
7079643
Reads that passed WASP filtering - common to both STAR_WASP and WASP
6945801
Reads unique to STAR_WAP:
6951141
Reads unique to WASP:
6948869
——————————————————————————————
Sample NA12878_PolyA
passed wasp filtering:
5962688 passed_WASP_filtering_vW_1
VW_Tagged reads:
6090799 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
5962688
reads to remap:
6060990 reads_to_remap_unique
reads to keep:
5943562 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
6060990
Reads unique to STAR_WASP:
6090799
Reads unique to WASP:
6060990
Reads that passed WASP filtering - common to both STAR_WASP and WASP
5942261
Reads unique to STAR_WAP:
5962688
Reads unique to WASP:
5943562
——————————————————————————————
Sample NA12878_PolyA_Rep
passed wasp filtering:
5952452 passed_WASP_filtering_vW_1
VW_Tagged reads:
6087269 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
5952452
reads to remap:
6058234 reads_to_remap_unique
reads to keep:
5934784 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
6058234
Reads unique to STAR_WASP:
6087269
Reads unique to WASP:
6058234
Reads that passed WASP filtering - common to both STAR_WASP and WASP
5933129
Reads unique to STAR_WAP:
5952452
Reads unique to WASP:
5934784
——————————————————————————————
Sample NA12878_RAMPAGE
passed wasp filtering:
248072 passed_WASP_filtering_vW_1
VW_Tagged reads:
384173 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
248072
reads to remap:
383992 reads_to_remap_unique
reads to keep:
248053 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
383992
Reads unique to STAR_WASP:
384173
Reads unique to WASP:
383992
Reads that passed WASP filtering - common to both STAR_WASP and WASP
248017
Reads unique to STAR_WAP:
248072
Reads unique to WASP:
248053
——————————————————————————————
Sample NA12878_RAMPAGE_Rep
passed wasp filtering:
251954 passed_WASP_filtering_vW_1
VW_Tagged reads:
355632 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
251954
reads to remap:
355418 reads_to_remap_unique
reads to keep:
251914 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
355418
Reads unique to STAR_WASP:
355632
Reads unique to WASP:
355418
Reads that passed WASP filtering - common to both STAR_WASP and WASP
251892
Reads unique to STAR_WAP:
251954
Reads unique to WASP:
251914
——————————————————————————————
Sample NA12878_Small
passed wasp filtering:
0 passed_WASP_filtering_vW_1
VW_Tagged reads:
1283589 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
0
reads to remap:
1283588 reads_to_remap_unique
reads to keep:
13343155 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1283588
Reads unique to STAR_WASP:
1283589
Reads unique to WASP:
1283588
Reads that passed WASP filtering - common to both STAR_WASP and WASP
0
Reads unique to STAR_WAP:
0
Reads unique to WASP:
13343155
——————————————————————————————
Sample NA12878_Total
passed wasp filtering:
5920376 passed_WASP_filtering_vW_1
VW_Tagged reads:
6057666 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
5920376
reads to remap:
6033171 reads_to_remap_unique
reads to keep:
5905980 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
6033171
Reads unique to STAR_WASP:
6057666
Reads unique to WASP:
6033171
Reads that passed WASP filtering - common to both STAR_WASP and WASP
5904001
Reads unique to STAR_WAP:
5920376
Reads unique to WASP:
5905980
——————————————————————————————
Sample NA12878_Total_Rep
passed wasp filtering:
5334064 passed_WASP_filtering_vW_1
VW_Tagged reads:
5453790 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
5334064
reads to remap:
5430733 reads_to_remap_unique
reads to keep:
5320502 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
5430733
Reads unique to STAR_WASP:
5453790
Reads unique to WASP:
5430733
Reads that passed WASP filtering - common to both STAR_WASP and WASP
5318719
Reads unique to STAR_WAP:
5334064
Reads unique to WASP:
5320502
——————————————————————————————
Sample NA19238
passed wasp filtering:
1600184 passed_WASP_filtering_vW_1
VW_Tagged reads:
1649709 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1600184
reads to remap:
1649549 reads_to_remap_unique
reads to keep:
1600491 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1649549
Reads unique to STAR_WASP:
1649709
Reads unique to WASP:
1649549
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1600074
Reads unique to STAR_WAP:
1600184
Reads unique to WASP:
1600491
——————————————————————————————
Sample NA19239
passed wasp filtering:
1627716 passed_WASP_filtering_vW_1
VW_Tagged reads:
1688256 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1627716
reads to remap:
1687966 reads_to_remap_unique
reads to keep:
1628307 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1687966
Reads unique to STAR_WASP:
1688256
Reads unique to WASP:
1687966
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1627569
Reads unique to STAR_WAP:
1627716
Reads unique to WASP:
1628307
——————————————————————————————
Sample NA19240
passed wasp filtering:
1387852 passed_WASP_filtering_vW_1
VW_Tagged reads:
1431962 STAR_WASP_vW_Tagged_Reads_Unique
vw=1:
1387852
reads to remap:
1431726 reads_to_remap_unique
reads to keep:
1388062 reads_to_keep_unique
Reads overlapping variants - common to both STAR_WASP and WASP:
1431726
Reads unique to STAR_WASP:
1431962
Reads unique to WASP:
1431726
Reads that passed WASP filtering - common to both STAR_WASP and WASP
1387720
Reads unique to STAR_WAP:
1387852
Reads unique to WASP:
1388062
——————————————————————————————