2021-08-02 14:38:41 [INFO] Starting.
2021-08-02 14:38:41 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-02 14:38:41 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-02 14:38:41 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes
2021-08-02 14:38:41 [INFO] Using only main chromosomes: chr3R, chr3L, chr2R, chrX, chr2L, chrY, chr4, chrM
2021-08-02 14:38:41 [INFO] Building aggregate.
2021-08-02 14:38:41 [INFO] Writing every 10 Runs.
2021-08-02 14:38:41 [INFO] Processing SRX2837381. (1/2)
2021-08-02 14:38:41 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-02 14:38:45 [INFO] Processing SRX2837380. (2/2)
2021-08-02 14:38:45 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-02 14:38:48 [INFO] Writing to disk...
2021-08-02 14:38:50 [INFO] Finished.
2021-08-02 16:00:58 [INFO] Starting.
2021-08-02 16:00:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-02 16:00:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-02 16:00:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:00:58 [INFO] Building aggregate.
2021-08-02 16:00:58 [INFO] Writing every 10 Runs.
2021-08-02 16:00:58 [INFO] Processing SRX2837381. (1/2)
2021-08-02 16:44:31 [INFO] Starting.
2021-08-02 16:44:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-02 16:44:31 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-02 16:44:31 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5.
2021-08-02 16:44:31 [INFO] Building aggregate.
2021-08-02 16:44:31 [INFO] Writing every 10 Runs.
2021-08-02 16:44:31 [INFO] Processing SRX2837381. (1/2)
2021-08-02 16:56:36 [INFO] Starting.
2021-08-02 16:56:36 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-02 16:56:36 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-02 16:56:36 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:56:36 [INFO] Building aggregate.
2021-08-02 16:56:36 [INFO] Writing every 10 Runs.
2021-08-02 16:56:36 [INFO] Processing SRX2837381. (1/2)
2021-08-02 16:56:36 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-02 16:56:57 [INFO] Processing SRX2837380. (2/2)
2021-08-02 16:56:57 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-02 16:57:22 [INFO] Writing to disk...
2021-08-02 16:57:28 [INFO] Finished.
2021-08-03 14:01:06 [INFO] Starting.
2021-08-03 14:01:06 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-03 14:01:06 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-03 14:01:06 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:01:07 [INFO] Building aggregate for 40kbp_raw network.
2021-08-03 14:01:07 [INFO] Writing every 10 Runs.
2021-08-03 14:01:07 [INFO] Processing SRX2837381. (1/2)
2021-08-03 14:01:07 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-03 14:01:09 [INFO] Processing SRX2837380. (2/2)
2021-08-03 14:01:09 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-03 14:01:10 [INFO] Writing to disk...
2021-08-03 14:01:10 [INFO] Finished.
2021-08-03 14:03:17 [INFO] Starting.
2021-08-03 14:03:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-03 14:03:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-03 14:03:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:03:18 [INFO] Building aggregate for 25kbp_raw network.
2021-08-03 14:03:18 [INFO] Writing every 10 Runs.
2021-08-03 14:03:18 [INFO] Processing SRX2837381. (1/2)
2021-08-03 14:03:18 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-03 14:03:20 [INFO] Processing SRX2837380. (2/2)
2021-08-03 14:03:20 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-03 14:03:22 [INFO] Writing to disk...
2021-08-03 14:03:22 [INFO] Finished.
2021-08-03 14:05:45 [INFO] Starting.
2021-08-03 14:05:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-03 14:05:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-03 14:05:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:05:45 [INFO] Building aggregate for 5kbp_raw network.
2021-08-03 14:05:45 [INFO] Writing every 10 Runs.
2021-08-03 14:05:45 [INFO] Processing SRX2837381. (1/2)
2021-08-03 14:05:45 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-03 14:05:49 [INFO] Processing SRX2837380. (2/2)
2021-08-03 14:05:49 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-03 14:05:53 [INFO] Writing to disk...
2021-08-03 14:05:54 [INFO] Finished.
2021-08-03 14:10:56 [INFO] Starting.
2021-08-03 14:10:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-03 14:10:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-03 14:10:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:10:57 [INFO] Building aggregate for 1kbp_raw network.
2021-08-03 14:10:57 [INFO] Writing every 10 Runs.
2021-08-03 14:10:57 [INFO] Processing SRX2837381. (1/2)
2021-08-03 14:10:57 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-03 14:11:04 [INFO] Processing SRX2837380. (2/2)
2021-08-03 14:11:04 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-03 14:11:11 [INFO] Writing to disk...
2021-08-03 14:11:13 [INFO] Finished.
2021-08-17 10:17:26 [INFO] Starting.
2021-08-17 10:17:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-17 10:17:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-17 10:17:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:17:26 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:17:26 [INFO] Writing every 10 Runs.
2021-08-17 10:17:26 [INFO] Processing SRX2837381. (1/2)
2021-08-17 10:17:26 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-17 10:32:24 [INFO] Starting.
2021-08-17 10:32:24 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-17 10:32:24 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-17 10:32:24 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:32:24 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:32:24 [INFO] Writing every 10 Runs.
2021-08-17 10:32:24 [INFO] Processing SRX2837381. (1/2)
2021-08-17 10:32:24 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-17 10:32:25 [INFO] Processing SRX2837380. (2/2)
2021-08-17 10:32:25 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-17 10:32:26 [INFO] Writing to disk...
2021-08-17 10:32:26 [INFO] Finished.
2021-08-17 10:38:54 [INFO] Starting.
2021-08-17 10:38:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-17 10:38:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-17 10:38:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:38:54 [INFO] Building aggregate for 250kbp_raw network.
2021-08-17 10:38:54 [INFO] Writing every 10 Runs.
2021-08-17 10:38:54 [INFO] Processing SRX2837381. (1/2)
2021-08-17 10:38:54 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-17 10:38:54 [INFO] Processing SRX2837380. (2/2)
2021-08-17 10:38:54 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-17 10:38:54 [INFO] Writing to disk...
2021-08-17 10:38:54 [INFO] Finished.
2021-08-17 10:40:21 [INFO] Starting.
2021-08-17 10:40:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/
2021-08-17 10:40:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP107556/aggregate.hdf5
2021-08-17 10:40:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:40:21 [INFO] Building aggregate for 500kbp_raw network.
2021-08-17 10:40:21 [INFO] Writing every 10 Runs.
2021-08-17 10:40:21 [INFO] Processing SRX2837381. (1/2)
2021-08-17 10:40:21 [INFO] Processing SRX2837381-SRR5579178. (1/2)
2021-08-17 10:40:21 [INFO] Processing SRX2837380. (2/2)
2021-08-17 10:40:21 [INFO] Processing SRX2837380-SRR5579177. (2/2)
2021-08-17 10:40:21 [INFO] Writing to disk...
2021-08-17 10:40:22 [INFO] Finished.