2021-08-02 14:38:41 [INFO] Starting.
2021-08-02 14:38:41 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-02 14:38:41 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-02 14:38:41 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes
2021-08-02 14:38:41 [INFO] Using only main chromosomes: chr3R, chr3L, chr2R, chrX, chr2L, chrY, chr4, chrM
2021-08-02 14:38:41 [INFO] Building aggregate.
2021-08-02 14:38:41 [INFO] Writing every 10 Runs.
2021-08-02 14:38:41 [INFO] Processing SRX4577934. (1/5)
2021-08-02 14:38:41 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-02 14:38:45 [INFO] Processing SRX4577932. (2/5)
2021-08-02 14:38:45 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-02 14:38:46 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-02 14:38:47 [INFO] Processing SRX4577931. (3/5)
2021-08-02 14:38:47 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-02 14:38:48 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-02 14:38:52 [INFO] Processing SRX4577935. (4/5)
2021-08-02 14:38:52 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-02 14:38:56 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-02 14:38:58 [INFO] Processing SRX4577933. (5/5)
2021-08-02 14:38:58 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-02 14:38:58 [INFO] Writing to disk...
2021-08-02 14:38:59 [INFO] Finished.
2021-08-02 16:00:58 [INFO] Starting.
2021-08-02 16:00:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-02 16:00:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-02 16:00:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:00:58 [INFO] Building aggregate.
2021-08-02 16:00:58 [INFO] Writing every 10 Runs.
2021-08-02 16:00:58 [INFO] Processing SRX4577934. (1/5)
2021-08-02 16:44:32 [INFO] Starting.
2021-08-02 16:44:32 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-02 16:44:32 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-02 16:44:32 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:44:32 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:44:32 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:44:32 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:44:32 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5.
2021-08-02 16:44:32 [INFO] Building aggregate.
2021-08-02 16:44:32 [INFO] Writing every 10 Runs.
2021-08-02 16:44:32 [INFO] Processing SRX4577934. (1/5)
2021-08-02 16:56:37 [INFO] Starting.
2021-08-02 16:56:37 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-02 16:56:37 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-02 16:56:37 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:56:37 [INFO] Building aggregate.
2021-08-02 16:56:37 [INFO] Writing every 10 Runs.
2021-08-02 16:56:37 [INFO] Processing SRX4577934. (1/5)
2021-08-02 16:56:37 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-02 16:56:47 [INFO] Processing SRX4577932. (2/5)
2021-08-02 16:56:47 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-02 16:56:57 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-02 16:57:03 [INFO] Processing SRX4577931. (3/5)
2021-08-02 16:57:03 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-02 16:57:12 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-02 16:57:35 [INFO] Processing SRX4577935. (4/5)
2021-08-02 16:57:35 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-02 16:57:55 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-02 16:58:06 [INFO] Processing SRX4577933. (5/5)
2021-08-02 16:58:06 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-02 16:58:17 [INFO] Writing to disk...
2021-08-02 16:58:23 [INFO] Finished.
2021-08-03 14:01:07 [INFO] Starting.
2021-08-03 14:01:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-03 14:01:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-03 14:01:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:01:08 [INFO] Building aggregate for 40kbp_raw network.
2021-08-03 14:01:08 [INFO] Writing every 10 Runs.
2021-08-03 14:01:08 [INFO] Processing SRX4577934. (1/5)
2021-08-03 14:01:08 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-03 14:01:10 [INFO] Processing SRX4577932. (2/5)
2021-08-03 14:01:10 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-03 14:01:10 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-03 14:01:11 [INFO] Processing SRX4577931. (3/5)
2021-08-03 14:01:11 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-03 14:01:11 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-03 14:01:12 [INFO] Processing SRX4577935. (4/5)
2021-08-03 14:01:12 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-03 14:01:14 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-03 14:01:15 [INFO] Processing SRX4577933. (5/5)
2021-08-03 14:01:15 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-03 14:01:15 [INFO] Writing to disk...
2021-08-03 14:01:15 [INFO] Finished.
2021-08-03 14:03:18 [INFO] Starting.
2021-08-03 14:03:18 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-03 14:03:18 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-03 14:03:18 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:03:18 [INFO] Building aggregate for 25kbp_raw network.
2021-08-03 14:03:18 [INFO] Writing every 10 Runs.
2021-08-03 14:03:18 [INFO] Processing SRX4577934. (1/5)
2021-08-03 14:03:18 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-03 14:03:21 [INFO] Processing SRX4577932. (2/5)
2021-08-03 14:03:21 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-03 14:03:22 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-03 14:03:22 [INFO] Processing SRX4577931. (3/5)
2021-08-03 14:03:22 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-03 14:03:22 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-03 14:03:24 [INFO] Processing SRX4577935. (4/5)
2021-08-03 14:03:24 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-03 14:03:25 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-03 14:03:26 [INFO] Processing SRX4577933. (5/5)
2021-08-03 14:03:26 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-03 14:03:26 [INFO] Writing to disk...
2021-08-03 14:03:27 [INFO] Finished.
2021-08-03 14:05:45 [INFO] Starting.
2021-08-03 14:05:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-03 14:05:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-03 14:05:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:05:45 [INFO] Building aggregate for 5kbp_raw network.
2021-08-03 14:05:45 [INFO] Writing every 10 Runs.
2021-08-03 14:05:45 [INFO] Processing SRX4577934. (1/5)
2021-08-03 14:05:45 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-03 14:05:48 [INFO] Processing SRX4577932. (2/5)
2021-08-03 14:05:48 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-03 14:05:50 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-03 14:05:50 [INFO] Processing SRX4577931. (3/5)
2021-08-03 14:05:50 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-03 14:05:50 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-03 14:05:55 [INFO] Processing SRX4577935. (4/5)
2021-08-03 14:05:55 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-03 14:06:00 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-03 14:06:02 [INFO] Processing SRX4577933. (5/5)
2021-08-03 14:06:02 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-03 14:06:02 [INFO] Writing to disk...
2021-08-03 14:06:04 [INFO] Finished.
2021-08-03 14:10:56 [INFO] Starting.
2021-08-03 14:10:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-03 14:10:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-03 14:10:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:10:56 [INFO] Building aggregate for 1kbp_raw network.
2021-08-03 14:10:56 [INFO] Writing every 10 Runs.
2021-08-03 14:10:56 [INFO] Processing SRX4577934. (1/5)
2021-08-03 14:10:56 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-03 14:11:00 [INFO] Processing SRX4577932. (2/5)
2021-08-03 14:11:00 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-03 14:11:01 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-03 14:11:02 [INFO] Processing SRX4577931. (3/5)
2021-08-03 14:11:02 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-03 14:11:03 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-03 14:11:09 [INFO] Processing SRX4577935. (4/5)
2021-08-03 14:11:09 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-03 14:11:15 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-03 14:11:17 [INFO] Processing SRX4577933. (5/5)
2021-08-03 14:11:17 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-03 14:11:17 [INFO] Writing to disk...
2021-08-03 14:11:20 [INFO] Finished.
2021-08-17 10:17:26 [INFO] Starting.
2021-08-17 10:17:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-17 10:17:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-17 10:17:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:17:26 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:17:26 [INFO] Writing every 10 Runs.
2021-08-17 10:17:26 [INFO] Processing SRX4577934. (1/5)
2021-08-17 10:17:26 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-17 10:32:25 [INFO] Starting.
2021-08-17 10:32:25 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-17 10:32:25 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-17 10:32:25 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:32:25 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:32:25 [INFO] Writing every 10 Runs.
2021-08-17 10:32:25 [INFO] Processing SRX4577934. (1/5)
2021-08-17 10:32:25 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-17 10:32:26 [INFO] Processing SRX4577932. (2/5)
2021-08-17 10:32:26 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-17 10:32:26 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-17 10:32:26 [INFO] Processing SRX4577931. (3/5)
2021-08-17 10:32:26 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-17 10:32:27 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-17 10:32:27 [INFO] Processing SRX4577935. (4/5)
2021-08-17 10:32:27 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-17 10:32:28 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-17 10:32:28 [INFO] Processing SRX4577933. (5/5)
2021-08-17 10:32:28 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-17 10:32:29 [INFO] Writing to disk...
2021-08-17 10:32:29 [INFO] Finished.
2021-08-17 10:38:54 [INFO] Starting.
2021-08-17 10:38:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-17 10:38:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-17 10:38:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:38:54 [INFO] Building aggregate for 250kbp_raw network.
2021-08-17 10:38:54 [INFO] Writing every 10 Runs.
2021-08-17 10:38:54 [INFO] Processing SRX4577934. (1/5)
2021-08-17 10:38:54 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-17 10:38:54 [INFO] Processing SRX4577932. (2/5)
2021-08-17 10:38:54 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-17 10:38:54 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-17 10:38:55 [INFO] Processing SRX4577931. (3/5)
2021-08-17 10:38:55 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-17 10:38:55 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-17 10:38:55 [INFO] Processing SRX4577935. (4/5)
2021-08-17 10:38:55 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-17 10:38:55 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-17 10:38:56 [INFO] Processing SRX4577933. (5/5)
2021-08-17 10:38:56 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-17 10:38:56 [INFO] Writing to disk...
2021-08-17 10:38:56 [INFO] Finished.
2021-08-17 10:40:20 [INFO] Starting.
2021-08-17 10:40:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/
2021-08-17 10:40:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP158369/aggregate.hdf5
2021-08-17 10:40:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:40:21 [INFO] Building aggregate for 500kbp_raw network.
2021-08-17 10:40:21 [INFO] Writing every 10 Runs.
2021-08-17 10:40:21 [INFO] Processing SRX4577934. (1/5)
2021-08-17 10:40:21 [INFO] Processing SRX4577934-SRR7721029. (1/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577932. (2/5)
2021-08-17 10:40:21 [INFO] Processing SRX4577932-SRR7721026. (2/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577932-SRR7721027. (3/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577931. (3/5)
2021-08-17 10:40:21 [INFO] Processing SRX4577931-SRR7721025. (4/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577931-SRR7721024. (5/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577935. (4/5)
2021-08-17 10:40:21 [INFO] Processing SRX4577935-SRR7721030. (6/8)
2021-08-17 10:40:21 [INFO] Processing SRX4577935-SRR7721031. (7/8)
2021-08-17 10:40:22 [INFO] Processing SRX4577933. (5/5)
2021-08-17 10:40:22 [INFO] Processing SRX4577933-SRR7721028. (8/8)
2021-08-17 10:40:22 [INFO] Writing to disk...
2021-08-17 10:40:22 [INFO] Finished.