2021-08-02 14:38:41 [INFO] Starting.
2021-08-02 14:38:41 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-02 14:38:41 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-02 14:38:41 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes
2021-08-02 14:38:41 [INFO] Using only main chromosomes: chr3R, chr3L, chr2R, chrX, chr2L, chrY, chr4, chrM
2021-08-02 14:38:41 [INFO] Building aggregate.
2021-08-02 14:38:41 [INFO] Writing every 10 Runs.
2021-08-02 14:38:41 [INFO] Processing SRX4887861. (1/2)
2021-08-02 14:38:41 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-02 14:38:44 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-02 14:38:46 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-02 14:38:49 [INFO] Processing SRX4887862. (2/2)
2021-08-02 14:38:49 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-02 14:38:51 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-02 14:38:54 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-02 14:38:56 [INFO] Writing to disk...
2021-08-02 14:38:57 [INFO] Finished.
2021-08-02 16:00:58 [INFO] Starting.
2021-08-02 16:00:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-02 16:00:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-02 16:00:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:00:58 [INFO] Building aggregate.
2021-08-02 16:00:58 [INFO] Writing every 10 Runs.
2021-08-02 16:00:58 [INFO] Processing SRX4887861. (1/2)
2021-08-02 16:44:31 [INFO] Starting.
2021-08-02 16:44:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-02 16:44:31 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-02 16:44:31 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5.
2021-08-02 16:44:31 [INFO] Building aggregate.
2021-08-02 16:44:31 [INFO] Writing every 10 Runs.
2021-08-02 16:44:31 [INFO] Processing SRX4887861. (1/2)
2021-08-02 16:56:36 [INFO] Starting.
2021-08-02 16:56:36 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-02 16:56:36 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-02 16:56:36 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:56:36 [INFO] Building aggregate.
2021-08-02 16:56:36 [INFO] Writing every 10 Runs.
2021-08-02 16:56:36 [INFO] Processing SRX4887861. (1/2)
2021-08-02 16:56:36 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-02 16:56:46 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-02 16:56:58 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-02 16:57:12 [INFO] Processing SRX4887862. (2/2)
2021-08-02 16:57:12 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-02 16:57:26 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-02 16:57:41 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-02 16:57:55 [INFO] Writing to disk...
2021-08-02 16:57:59 [INFO] Finished.
2021-08-03 14:01:07 [INFO] Starting.
2021-08-03 14:01:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-03 14:01:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-03 14:01:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:01:07 [INFO] Building aggregate for 40kbp_raw network.
2021-08-03 14:01:07 [INFO] Writing every 10 Runs.
2021-08-03 14:01:07 [INFO] Processing SRX4887861. (1/2)
2021-08-03 14:01:07 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-03 14:01:09 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-03 14:01:10 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-03 14:01:11 [INFO] Processing SRX4887862. (2/2)
2021-08-03 14:01:11 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-03 14:01:12 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-03 14:01:13 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-03 14:01:14 [INFO] Writing to disk...
2021-08-03 14:01:14 [INFO] Finished.
2021-08-03 14:03:18 [INFO] Starting.
2021-08-03 14:03:18 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-03 14:03:18 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-03 14:03:18 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:03:18 [INFO] Building aggregate for 25kbp_raw network.
2021-08-03 14:03:18 [INFO] Writing every 10 Runs.
2021-08-03 14:03:18 [INFO] Processing SRX4887861. (1/2)
2021-08-03 14:03:18 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-03 14:03:20 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-03 14:03:22 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-03 14:03:23 [INFO] Processing SRX4887862. (2/2)
2021-08-03 14:03:23 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-03 14:03:25 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-03 14:03:27 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-03 14:03:28 [INFO] Writing to disk...
2021-08-03 14:03:29 [INFO] Finished.
2021-08-03 14:05:45 [INFO] Starting.
2021-08-03 14:05:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-03 14:05:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-03 14:05:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:05:45 [INFO] Building aggregate for 5kbp_raw network.
2021-08-03 14:05:45 [INFO] Writing every 10 Runs.
2021-08-03 14:05:45 [INFO] Processing SRX4887861. (1/2)
2021-08-03 14:05:45 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-03 14:05:48 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-03 14:05:50 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-03 14:05:52 [INFO] Processing SRX4887862. (2/2)
2021-08-03 14:05:52 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-03 14:05:54 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-03 14:05:56 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-03 14:05:59 [INFO] Writing to disk...
2021-08-03 14:06:01 [INFO] Finished.
2021-08-03 14:10:56 [INFO] Starting.
2021-08-03 14:10:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-03 14:10:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-03 14:10:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:10:57 [INFO] Building aggregate for 1kbp_raw network.
2021-08-03 14:10:57 [INFO] Writing every 10 Runs.
2021-08-03 14:10:57 [INFO] Processing SRX4887861. (1/2)
2021-08-03 14:10:57 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-03 14:10:59 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-03 14:11:03 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-03 14:11:05 [INFO] Processing SRX4887862. (2/2)
2021-08-03 14:11:05 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-03 14:11:10 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-03 14:11:12 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-03 14:11:16 [INFO] Writing to disk...
2021-08-03 14:11:18 [INFO] Finished.
2021-08-17 10:17:26 [INFO] Starting.
2021-08-17 10:17:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-17 10:17:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-17 10:17:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:17:26 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:17:26 [INFO] Writing every 10 Runs.
2021-08-17 10:17:26 [INFO] Processing SRX4887861. (1/2)
2021-08-17 10:17:26 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-17 10:32:24 [INFO] Starting.
2021-08-17 10:32:24 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-17 10:32:24 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-17 10:32:24 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:32:24 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:32:24 [INFO] Writing every 10 Runs.
2021-08-17 10:32:24 [INFO] Processing SRX4887861. (1/2)
2021-08-17 10:32:24 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-17 10:32:25 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-17 10:32:26 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-17 10:32:27 [INFO] Processing SRX4887862. (2/2)
2021-08-17 10:32:27 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-17 10:32:27 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-17 10:32:28 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-17 10:32:29 [INFO] Writing to disk...
2021-08-17 10:32:29 [INFO] Finished.
2021-08-17 10:38:53 [INFO] Starting.
2021-08-17 10:38:53 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-17 10:38:53 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-17 10:38:53 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:38:53 [INFO] Building aggregate for 250kbp_raw network.
2021-08-17 10:38:53 [INFO] Writing every 10 Runs.
2021-08-17 10:38:53 [INFO] Processing SRX4887861. (1/2)
2021-08-17 10:38:53 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-17 10:38:53 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-17 10:38:54 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-17 10:38:54 [INFO] Processing SRX4887862. (2/2)
2021-08-17 10:38:54 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-17 10:38:54 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-17 10:38:54 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-17 10:38:55 [INFO] Writing to disk...
2021-08-17 10:38:55 [INFO] Finished.
2021-08-17 10:40:20 [INFO] Starting.
2021-08-17 10:40:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/
2021-08-17 10:40:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP165772/aggregate.hdf5
2021-08-17 10:40:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:40:20 [INFO] Building aggregate for 500kbp_raw network.
2021-08-17 10:40:20 [INFO] Writing every 10 Runs.
2021-08-17 10:40:20 [INFO] Processing SRX4887861. (1/2)
2021-08-17 10:40:20 [INFO] Processing SRX4887861-SRR8058286. (1/6)
2021-08-17 10:40:20 [INFO] Processing SRX4887861-SRR8058285. (2/6)
2021-08-17 10:40:20 [INFO] Processing SRX4887861-SRR8058287. (3/6)
2021-08-17 10:40:20 [INFO] Processing SRX4887862. (2/2)
2021-08-17 10:40:20 [INFO] Processing SRX4887862-SRR8058289. (4/6)
2021-08-17 10:40:20 [INFO] Processing SRX4887862-SRR8058290. (5/6)
2021-08-17 10:40:20 [INFO] Processing SRX4887862-SRR8058288. (6/6)
2021-08-17 10:40:20 [INFO] Writing to disk...
2021-08-17 10:40:20 [INFO] Finished.