2021-08-02 14:38:41 [INFO] Starting.
2021-08-02 14:38:41 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-02 14:38:41 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-02 14:38:41 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes
2021-08-02 14:38:41 [INFO] Using only main chromosomes: chr3R, chr3L, chr2R, chrX, chr2L, chrY, chr4, chrM
2021-08-02 14:38:41 [INFO] Building aggregate.
2021-08-02 14:38:41 [INFO] Writing every 10 Runs.
2021-08-02 14:38:41 [INFO] Processing SRX6902313. (1/4)
2021-08-02 14:38:41 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-02 14:38:45 [INFO] Processing SRX6902316. (2/4)
2021-08-02 14:38:45 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-02 14:38:50 [INFO] Processing SRX6902314. (3/4)
2021-08-02 14:38:50 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-02 14:38:55 [INFO] Processing SRX6902315. (4/4)
2021-08-02 14:38:55 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-02 14:39:00 [INFO] Writing to disk...
2021-08-02 14:39:01 [INFO] Finished.
2021-08-02 16:00:58 [INFO] Starting.
2021-08-02 16:00:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-02 16:00:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-02 16:00:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:00:58 [ERROR] /aggregates/1kbp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:00:58 [INFO] Building aggregate.
2021-08-02 16:00:58 [INFO] Writing every 10 Runs.
2021-08-02 16:00:58 [INFO] Processing SRX6902313. (1/4)
2021-08-02 16:44:31 [INFO] Starting.
2021-08-02 16:44:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-02 16:44:31 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-02 16:44:31 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:44:31 [ERROR] /aggregates/1bp_raw does not exist in /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5.
2021-08-02 16:44:31 [INFO] Building aggregate.
2021-08-02 16:44:31 [INFO] Writing every 10 Runs.
2021-08-02 16:44:31 [INFO] Processing SRX6902313. (1/4)
2021-08-02 16:56:36 [INFO] Starting.
2021-08-02 16:56:36 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-02 16:56:36 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-02 16:56:36 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-02 16:56:36 [INFO] Building aggregate.
2021-08-02 16:56:36 [INFO] Writing every 10 Runs.
2021-08-02 16:56:36 [INFO] Processing SRX6902313. (1/4)
2021-08-02 16:56:36 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-02 16:56:46 [INFO] Processing SRX6902316. (2/4)
2021-08-02 16:56:46 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-02 16:57:04 [INFO] Processing SRX6902314. (3/4)
2021-08-02 16:57:04 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-02 16:57:23 [INFO] Processing SRX6902315. (4/4)
2021-08-02 16:57:23 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-02 16:57:51 [INFO] Writing to disk...
2021-08-02 16:58:00 [INFO] Finished.
2021-08-03 14:01:06 [INFO] Starting.
2021-08-03 14:01:06 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-03 14:01:06 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-03 14:01:06 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:01:07 [INFO] Building aggregate for 40kbp_raw network.
2021-08-03 14:01:07 [INFO] Writing every 10 Runs.
2021-08-03 14:01:07 [INFO] Processing SRX6902313. (1/4)
2021-08-03 14:01:07 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-03 14:01:09 [INFO] Processing SRX6902316. (2/4)
2021-08-03 14:01:09 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-03 14:01:10 [INFO] Processing SRX6902314. (3/4)
2021-08-03 14:01:10 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-03 14:01:12 [INFO] Processing SRX6902315. (4/4)
2021-08-03 14:01:12 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-03 14:01:13 [INFO] Writing to disk...
2021-08-03 14:01:13 [INFO] Finished.
2021-08-03 14:03:17 [INFO] Starting.
2021-08-03 14:03:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-03 14:03:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-03 14:03:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:03:17 [INFO] Building aggregate for 25kbp_raw network.
2021-08-03 14:03:17 [INFO] Writing every 10 Runs.
2021-08-03 14:03:18 [INFO] Processing SRX6902313. (1/4)
2021-08-03 14:03:18 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-03 14:03:21 [INFO] Processing SRX6902316. (2/4)
2021-08-03 14:03:21 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-03 14:03:24 [INFO] Processing SRX6902314. (3/4)
2021-08-03 14:03:24 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-03 14:03:28 [INFO] Processing SRX6902315. (4/4)
2021-08-03 14:03:28 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-03 14:03:31 [INFO] Writing to disk...
2021-08-03 14:03:31 [INFO] Finished.
2021-08-03 14:05:45 [INFO] Starting.
2021-08-03 14:05:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-03 14:05:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-03 14:05:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:05:45 [INFO] Building aggregate for 5kbp_raw network.
2021-08-03 14:05:45 [INFO] Writing every 10 Runs.
2021-08-03 14:05:45 [INFO] Processing SRX6902313. (1/4)
2021-08-03 14:05:45 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-03 14:05:51 [INFO] Processing SRX6902316. (2/4)
2021-08-03 14:05:51 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-03 14:05:57 [INFO] Processing SRX6902314. (3/4)
2021-08-03 14:05:57 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-03 14:06:03 [INFO] Processing SRX6902315. (4/4)
2021-08-03 14:06:03 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-03 14:06:11 [INFO] Writing to disk...
2021-08-03 14:06:15 [INFO] Finished.
2021-08-03 14:10:56 [INFO] Starting.
2021-08-03 14:10:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-03 14:10:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-03 14:10:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-03 14:10:56 [INFO] Building aggregate for 1kbp_raw network.
2021-08-03 14:10:56 [INFO] Writing every 10 Runs.
2021-08-03 14:10:56 [INFO] Processing SRX6902313. (1/4)
2021-08-03 14:10:56 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-03 14:11:02 [INFO] Processing SRX6902316. (2/4)
2021-08-03 14:11:02 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-03 14:11:09 [INFO] Processing SRX6902314. (3/4)
2021-08-03 14:11:09 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-03 14:11:16 [INFO] Processing SRX6902315. (4/4)
2021-08-03 14:11:16 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-03 14:11:25 [INFO] Writing to disk...
2021-08-03 14:11:28 [INFO] Finished.
2021-08-17 10:17:26 [INFO] Starting.
2021-08-17 10:17:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-17 10:17:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-17 10:17:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:17:26 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:17:26 [INFO] Writing every 10 Runs.
2021-08-17 10:17:26 [INFO] Processing SRX6902313. (1/4)
2021-08-17 10:17:26 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-17 10:32:25 [INFO] Starting.
2021-08-17 10:32:25 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-17 10:32:25 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-17 10:32:25 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:32:25 [INFO] Building aggregate for 100kbp_raw network.
2021-08-17 10:32:25 [INFO] Writing every 10 Runs.
2021-08-17 10:32:25 [INFO] Processing SRX6902313. (1/4)
2021-08-17 10:32:25 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-17 10:32:26 [INFO] Processing SRX6902316. (2/4)
2021-08-17 10:32:26 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-17 10:32:27 [INFO] Processing SRX6902314. (3/4)
2021-08-17 10:32:27 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-17 10:32:28 [INFO] Processing SRX6902315. (4/4)
2021-08-17 10:32:28 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-17 10:32:28 [INFO] Writing to disk...
2021-08-17 10:32:28 [INFO] Finished.
2021-08-17 10:38:52 [INFO] Starting.
2021-08-17 10:38:52 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-17 10:38:52 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-17 10:38:52 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:38:53 [INFO] Building aggregate for 250kbp_raw network.
2021-08-17 10:38:53 [INFO] Writing every 10 Runs.
2021-08-17 10:38:53 [INFO] Processing SRX6902313. (1/4)
2021-08-17 10:38:53 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-17 10:38:53 [INFO] Processing SRX6902316. (2/4)
2021-08-17 10:38:53 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-17 10:38:53 [INFO] Processing SRX6902314. (3/4)
2021-08-17 10:38:53 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-17 10:38:54 [INFO] Processing SRX6902315. (4/4)
2021-08-17 10:38:54 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-17 10:38:54 [INFO] Writing to disk...
2021-08-17 10:38:54 [INFO] Finished.
2021-08-17 10:40:20 [INFO] Starting.
2021-08-17 10:40:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/
2021-08-17 10:40:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_drosophila/SRP223221/aggregate.hdf5
2021-08-17 10:40:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/drosophila_melanogaster_6/dm6.chrom.sizes is ignored due to existing aggregate.
2021-08-17 10:40:20 [INFO] Building aggregate for 500kbp_raw network.
2021-08-17 10:40:20 [INFO] Writing every 10 Runs.
2021-08-17 10:40:20 [INFO] Processing SRX6902313. (1/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902313-SRR10180913. (1/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902316. (2/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902316-SRR10180912. (2/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902314. (3/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902314-SRR10180910. (3/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902315. (4/4)
2021-08-17 10:40:20 [INFO] Processing SRX6902315-SRR10180911. (4/4)
2021-08-17 10:40:21 [INFO] Writing to disk...
2021-08-17 10:40:21 [INFO] Finished.