2021-06-10 00:53:45 [INFO] Starting.
2021-06-10 00:53:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-06-10 00:53:45 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-06-10 00:53:45 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 00:53:45 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 00:53:46 [INFO] Building aggregate.
2021-06-10 00:53:46 [INFO] Writing every 10 Runs.
2021-06-10 00:53:47 [INFO] Processing SRX2443838. (1/39)
2021-06-10 00:53:47 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-06-10 00:54:04 [INFO] Processing SRX2443911. (2/39)
2021-06-10 00:54:04 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-06-10 00:54:23 [INFO] Processing SRX2443848. (3/39)
2021-06-10 00:54:23 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-06-10 00:54:54 [INFO] Processing SRX2443872. (4/39)
2021-06-10 00:54:54 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-06-10 00:55:11 [INFO] Processing SRX2443907. (5/39)
2021-06-10 00:55:11 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-06-10 00:55:34 [INFO] Processing SRX2443871. (6/39)
2021-06-10 00:55:34 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-06-10 00:56:23 [INFO] Processing SRX2443846. (7/39)
2021-06-10 00:56:23 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-06-10 00:56:50 [INFO] Processing SRX2443870. (8/39)
2021-06-10 00:56:50 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-06-10 00:57:22 [INFO] Processing SRX2443815. (9/39)
2021-06-10 00:57:22 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-06-10 00:57:51 [INFO] Processing SRX2443837. (10/39)
2021-06-10 00:57:51 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-06-10 00:58:18 [INFO] Writing to disk...
2021-06-10 00:58:50 [INFO] Processing SRX2443847. (11/39)
2021-06-10 00:58:50 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-06-10 00:59:11 [INFO] Processing SRX2443835. (12/39)
2021-06-10 00:59:11 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-06-10 00:59:35 [INFO] Processing SRX2443834. (13/39)
2021-06-10 00:59:35 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-06-10 01:00:21 [INFO] Processing SRX2443845. (14/39)
2021-06-10 01:00:21 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-06-10 01:00:43 [INFO] Processing SRX2443844. (15/39)
2021-06-10 01:00:43 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-06-10 01:01:20 [INFO] Processing SRX2443836. (16/39)
2021-06-10 01:01:20 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-06-10 01:01:49 [INFO] Processing SRX2443904. (17/39)
2021-06-10 01:01:49 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-06-10 01:02:11 [INFO] Processing SRX2443867. (18/39)
2021-06-10 01:02:11 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-06-10 01:02:57 [INFO] Processing SRX2443818. (19/39)
2021-06-10 01:02:57 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-06-10 01:03:24 [INFO] Processing SRX2443865. (20/39)
2021-06-10 01:03:24 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-06-10 01:04:07 [INFO] Writing to disk...
2021-06-10 01:04:39 [INFO] Processing SRX2443840. (21/39)
2021-06-10 01:04:39 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-06-10 01:05:15 [INFO] Processing SRX2443905. (22/39)
2021-06-10 01:05:15 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-06-10 01:05:44 [INFO] Processing SRX2443869. (23/39)
2021-06-10 01:05:44 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-06-10 01:06:31 [INFO] Processing SRX2443906. (24/39)
2021-06-10 01:06:31 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-06-10 01:06:51 [INFO] Processing SRX2443843. (25/39)
2021-06-10 01:06:51 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-06-10 01:07:30 [INFO] Processing SRX2443814. (26/39)
2021-06-10 01:07:30 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-06-10 01:08:09 [INFO] Processing SRX2443816. (27/39)
2021-06-10 01:08:09 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-06-10 01:08:47 [INFO] Processing SRX2443908. (28/39)
2021-06-10 01:08:47 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-06-10 01:09:15 [INFO] Processing SRX2443842. (29/39)
2021-06-10 01:09:15 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-06-10 01:09:52 [INFO] Processing SRX2443833. (30/39)
2021-06-10 01:09:52 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-06-10 01:10:24 [INFO] Writing to disk...
2021-06-10 01:11:18 [INFO] Processing SRX2443820. (31/39)
2021-06-10 01:11:18 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-06-10 01:11:54 [INFO] Processing SRX2443868. (32/39)
2021-06-10 01:11:54 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-06-10 01:12:36 [INFO] Processing SRX2443866. (33/39)
2021-06-10 01:12:36 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-06-10 01:13:22 [INFO] Processing SRX2443909. (34/39)
2021-06-10 01:13:22 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-06-10 01:14:04 [INFO] Processing SRX2443839. (35/39)
2021-06-10 01:14:04 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-06-10 01:14:47 [INFO] Processing SRX2443841. (36/39)
2021-06-10 01:14:47 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-06-10 01:15:20 [INFO] Processing SRX2443910. (37/39)
2021-06-10 01:15:20 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-06-10 01:16:12 [INFO] Processing SRX2443819. (38/39)
2021-06-10 01:16:12 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-06-10 01:17:00 [INFO] Processing SRX2443817. (39/39)
2021-06-10 01:17:00 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-06-10 01:17:36 [INFO] Writing to disk...
2021-06-10 01:18:49 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX2443838. (1/39)
2021-08-02 17:08:56 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-04 22:08:17 [INFO] Starting.
2021-08-04 22:08:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-04 22:08:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-04 22:08:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:08:17 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:08:17 [INFO] Writing every 10 Runs.
2021-08-04 22:08:17 [INFO] Processing SRX2443838. (1/39)
2021-08-04 22:08:17 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-04 22:12:26 [INFO] Processing SRX2443911. (2/39)
2021-08-04 22:12:26 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-04 22:20:10 [INFO] Processing SRX2443848. (3/39)
2021-08-04 22:20:10 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-04 22:27:55 [INFO] Processing SRX2443872. (4/39)
2021-08-04 22:27:55 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-04 22:36:00 [INFO] Processing SRX2443907. (5/39)
2021-08-04 22:36:00 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-04 22:43:42 [INFO] Processing SRX2443871. (6/39)
2021-08-04 22:43:42 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-04 22:51:07 [INFO] Processing SRX2443846. (7/39)
2021-08-04 22:51:07 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-04 22:58:29 [INFO] Processing SRX2443870. (8/39)
2021-08-04 22:58:29 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-04 23:05:58 [INFO] Processing SRX2443815. (9/39)
2021-08-04 23:05:58 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-04 23:13:25 [INFO] Processing SRX2443837. (10/39)
2021-08-04 23:13:25 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-04 23:21:00 [INFO] Writing to disk...
2021-08-04 23:22:24 [INFO] Processing SRX2443847. (11/39)
2021-08-04 23:22:24 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-04 23:30:00 [INFO] Processing SRX2443835. (12/39)
2021-08-04 23:30:00 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-04 23:37:38 [INFO] Processing SRX2443834. (13/39)
2021-08-04 23:37:38 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-04 23:45:16 [INFO] Processing SRX2443845. (14/39)
2021-08-04 23:45:16 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-04 23:52:56 [INFO] Processing SRX2443844. (15/39)
2021-08-04 23:52:56 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-05 00:00:36 [INFO] Processing SRX2443836. (16/39)
2021-08-05 00:00:37 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-05 00:08:25 [INFO] Processing SRX2443904. (17/39)
2021-08-05 00:08:25 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-05 00:16:07 [INFO] Processing SRX2443867. (18/39)
2021-08-05 00:16:07 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-05 00:24:00 [INFO] Processing SRX2443818. (19/39)
2021-08-05 00:24:00 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-05 00:31:52 [INFO] Processing SRX2443865. (20/39)
2021-08-05 00:31:52 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-05 00:39:45 [INFO] Writing to disk...
2021-08-05 00:41:45 [INFO] Processing SRX2443840. (21/39)
2021-08-05 00:41:45 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-05 00:49:34 [INFO] Processing SRX2443905. (22/39)
2021-08-05 00:49:34 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-05 00:57:27 [INFO] Processing SRX2443869. (23/39)
2021-08-05 00:57:27 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-05 01:05:28 [INFO] Processing SRX2443906. (24/39)
2021-08-05 01:05:29 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-05 01:13:22 [INFO] Processing SRX2443843. (25/39)
2021-08-05 01:13:22 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-05 01:21:21 [INFO] Processing SRX2443814. (26/39)
2021-08-05 01:21:21 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-05 01:29:46 [INFO] Processing SRX2443816. (27/39)
2021-08-05 01:29:46 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-05 01:37:51 [INFO] Processing SRX2443908. (28/39)
2021-08-05 01:37:51 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-05 01:45:51 [INFO] Processing SRX2443842. (29/39)
2021-08-05 01:45:51 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-05 01:53:51 [INFO] Processing SRX2443833. (30/39)
2021-08-05 01:53:51 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-05 02:02:07 [INFO] Writing to disk...
2021-08-05 02:04:52 [INFO] Processing SRX2443820. (31/39)
2021-08-05 02:04:52 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-05 02:13:04 [INFO] Processing SRX2443868. (32/39)
2021-08-05 02:13:04 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-05 02:21:20 [INFO] Processing SRX2443866. (33/39)
2021-08-05 02:21:20 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-05 02:29:39 [INFO] Processing SRX2443909. (34/39)
2021-08-05 02:29:39 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-05 02:38:07 [INFO] Processing SRX2443839. (35/39)
2021-08-05 02:38:07 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-05 02:46:32 [INFO] Processing SRX2443841. (36/39)
2021-08-05 02:46:32 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-05 02:55:10 [INFO] Processing SRX2443910. (37/39)
2021-08-05 02:55:10 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-05 03:03:43 [INFO] Processing SRX2443819. (38/39)
2021-08-05 03:03:43 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-05 03:12:18 [INFO] Processing SRX2443817. (39/39)
2021-08-05 03:12:18 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-05 03:21:01 [INFO] Writing to disk...
2021-08-05 03:24:21 [INFO] Finished.
2021-08-12 17:14:32 [INFO] Starting.
2021-08-12 17:14:32 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-12 17:14:32 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-12 17:14:32 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 17:14:33 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 17:14:33 [INFO] Writing every 10 Runs.
2021-08-12 17:14:33 [INFO] Processing SRX2443838. (1/39)
2021-08-12 17:14:33 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-12 17:15:04 [INFO] Processing SRX2443911. (2/39)
2021-08-12 17:15:04 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-12 17:15:27 [INFO] Processing SRX2443848. (3/39)
2021-08-12 17:15:27 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-12 17:15:54 [INFO] Processing SRX2443872. (4/39)
2021-08-12 17:15:54 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-12 17:16:24 [INFO] Processing SRX2443907. (5/39)
2021-08-12 17:16:24 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-12 17:16:45 [INFO] Processing SRX2443871. (6/39)
2021-08-12 17:16:45 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-12 17:17:21 [INFO] Processing SRX2443846. (7/39)
2021-08-12 17:17:21 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-12 17:17:53 [INFO] Processing SRX2443870. (8/39)
2021-08-12 17:17:53 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-12 17:18:32 [INFO] Processing SRX2443815. (9/39)
2021-08-12 17:18:32 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-12 17:19:07 [INFO] Processing SRX2443837. (10/39)
2021-08-12 17:19:07 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-12 17:19:36 [INFO] Writing to disk...
2021-08-12 17:19:59 [INFO] Processing SRX2443847. (11/39)
2021-08-12 17:19:59 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-12 17:20:39 [INFO] Processing SRX2443835. (12/39)
2021-08-12 17:20:39 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-12 17:21:01 [INFO] Processing SRX2443834. (13/39)
2021-08-12 17:21:01 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-12 17:21:24 [INFO] Processing SRX2443845. (14/39)
2021-08-12 17:21:24 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-12 17:21:54 [INFO] Processing SRX2443844. (15/39)
2021-08-12 17:21:54 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-12 17:22:22 [INFO] Processing SRX2443836. (16/39)
2021-08-12 17:22:22 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-12 17:22:51 [INFO] Processing SRX2443904. (17/39)
2021-08-12 17:22:51 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-12 17:23:20 [INFO] Processing SRX2443867. (18/39)
2021-08-12 17:23:20 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-12 17:23:56 [INFO] Processing SRX2443818. (19/39)
2021-08-12 17:23:56 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-12 17:24:16 [INFO] Processing SRX2443865. (20/39)
2021-08-12 17:24:16 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-12 17:24:52 [INFO] Writing to disk...
2021-08-12 17:25:17 [INFO] Processing SRX2443840. (21/39)
2021-08-12 17:25:17 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-12 17:25:41 [INFO] Processing SRX2443905. (22/39)
2021-08-12 17:25:41 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-12 17:26:02 [INFO] Processing SRX2443869. (23/39)
2021-08-12 17:26:02 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-12 17:26:37 [INFO] Processing SRX2443906. (24/39)
2021-08-12 17:26:37 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-12 17:27:03 [INFO] Processing SRX2443843. (25/39)
2021-08-12 17:27:03 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-12 17:27:35 [INFO] Processing SRX2443814. (26/39)
2021-08-12 17:27:35 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-12 17:28:19 [INFO] Processing SRX2443816. (27/39)
2021-08-12 17:28:19 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-12 17:28:43 [INFO] Processing SRX2443908. (28/39)
2021-08-12 17:28:43 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-12 17:29:06 [INFO] Processing SRX2443842. (29/39)
2021-08-12 17:29:06 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-12 17:29:38 [INFO] Processing SRX2443833. (30/39)
2021-08-12 17:29:38 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-12 17:30:08 [INFO] Writing to disk...
2021-08-12 17:30:39 [INFO] Processing SRX2443820. (31/39)
2021-08-12 17:30:39 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-12 17:31:12 [INFO] Processing SRX2443868. (32/39)
2021-08-12 17:31:12 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-12 17:31:38 [INFO] Processing SRX2443866. (33/39)
2021-08-12 17:31:38 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-12 17:32:18 [INFO] Processing SRX2443909. (34/39)
2021-08-12 17:32:18 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-12 17:32:56 [INFO] Processing SRX2443839. (35/39)
2021-08-12 17:32:56 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-12 17:33:37 [INFO] Processing SRX2443841. (36/39)
2021-08-12 17:33:37 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-12 17:34:10 [INFO] Processing SRX2443910. (37/39)
2021-08-12 17:34:10 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-12 17:34:39 [INFO] Processing SRX2443819. (38/39)
2021-08-12 17:34:39 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-12 17:35:17 [INFO] Processing SRX2443817. (39/39)
2021-08-12 17:35:17 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-12 17:35:53 [INFO] Writing to disk...
2021-08-12 17:36:28 [INFO] Finished.
2021-08-13 09:03:34 [INFO] Starting.
2021-08-13 09:03:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-13 09:03:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-13 09:03:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:03:34 [INFO] Building aggregate for 25kbp_raw network.
2021-08-13 09:03:34 [INFO] Writing every 10 Runs.
2021-08-13 09:03:34 [INFO] Processing SRX2443838. (1/39)
2021-08-13 09:03:34 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-13 09:04:02 [INFO] Processing SRX2443911. (2/39)
2021-08-13 09:04:02 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-13 09:04:23 [INFO] Processing SRX2443848. (3/39)
2021-08-13 09:04:23 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-13 09:04:45 [INFO] Processing SRX2443872. (4/39)
2021-08-13 09:04:45 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-13 09:05:21 [INFO] Processing SRX2443907. (5/39)
2021-08-13 09:05:21 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-13 09:05:43 [INFO] Processing SRX2443871. (6/39)
2021-08-13 09:05:43 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-13 09:06:16 [INFO] Processing SRX2443846. (7/39)
2021-08-13 09:06:16 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-13 09:06:51 [INFO] Processing SRX2443870. (8/39)
2021-08-13 09:06:51 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-13 09:07:28 [INFO] Processing SRX2443815. (9/39)
2021-08-13 09:07:28 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-13 09:08:01 [INFO] Processing SRX2443837. (10/39)
2021-08-13 09:08:01 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-13 09:08:39 [INFO] Writing to disk...
2021-08-13 09:09:08 [INFO] Processing SRX2443847. (11/39)
2021-08-13 09:09:08 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-13 09:09:51 [INFO] Processing SRX2443835. (12/39)
2021-08-13 09:09:51 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-13 09:10:31 [INFO] Processing SRX2443834. (13/39)
2021-08-13 09:10:31 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-13 09:11:03 [INFO] Processing SRX2443845. (14/39)
2021-08-13 09:11:03 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-13 09:11:37 [INFO] Processing SRX2443844. (15/39)
2021-08-13 09:11:37 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-13 09:12:08 [INFO] Processing SRX2443836. (16/39)
2021-08-13 09:12:08 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-13 09:12:41 [INFO] Processing SRX2443904. (17/39)
2021-08-13 09:12:41 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-13 09:13:14 [INFO] Processing SRX2443867. (18/39)
2021-08-13 09:13:14 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-13 09:14:10 [INFO] Processing SRX2443818. (19/39)
2021-08-13 09:14:10 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-13 09:14:34 [INFO] Processing SRX2443865. (20/39)
2021-08-13 09:14:34 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-13 09:15:15 [INFO] Writing to disk...
2021-08-13 09:15:51 [INFO] Processing SRX2443840. (21/39)
2021-08-13 09:15:51 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-13 09:16:14 [INFO] Processing SRX2443905. (22/39)
2021-08-13 09:16:14 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-13 09:16:37 [INFO] Processing SRX2443869. (23/39)
2021-08-13 09:16:37 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-13 09:17:12 [INFO] Processing SRX2443906. (24/39)
2021-08-13 09:17:12 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-13 09:17:40 [INFO] Processing SRX2443843. (25/39)
2021-08-13 09:17:40 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-13 09:18:06 [INFO] Processing SRX2443814. (26/39)
2021-08-13 09:18:06 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-13 09:18:47 [INFO] Processing SRX2443816. (27/39)
2021-08-13 09:18:47 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-13 09:19:08 [INFO] Processing SRX2443908. (28/39)
2021-08-13 09:19:08 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-13 09:19:31 [INFO] Processing SRX2443842. (29/39)
2021-08-13 09:19:31 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-13 09:19:56 [INFO] Processing SRX2443833. (30/39)
2021-08-13 09:19:56 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-13 09:20:27 [INFO] Writing to disk...
2021-08-13 09:21:10 [INFO] Processing SRX2443820. (31/39)
2021-08-13 09:21:10 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-13 09:21:40 [INFO] Processing SRX2443868. (32/39)
2021-08-13 09:21:40 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-13 09:22:06 [INFO] Processing SRX2443866. (33/39)
2021-08-13 09:22:06 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-13 09:22:39 [INFO] Processing SRX2443909. (34/39)
2021-08-13 09:22:39 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-13 09:23:11 [INFO] Processing SRX2443839. (35/39)
2021-08-13 09:23:11 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-13 09:23:43 [INFO] Processing SRX2443841. (36/39)
2021-08-13 09:23:43 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-13 09:24:13 [INFO] Processing SRX2443910. (37/39)
2021-08-13 09:24:13 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-13 09:24:43 [INFO] Processing SRX2443819. (38/39)
2021-08-13 09:24:43 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-13 09:25:10 [INFO] Processing SRX2443817. (39/39)
2021-08-13 09:25:10 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-13 09:25:39 [INFO] Writing to disk...
2021-08-13 09:26:26 [INFO] Finished.
2021-08-13 13:10:08 [INFO] Starting.
2021-08-13 13:10:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-13 13:10:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-13 13:10:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-13 13:10:09 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 13:10:09 [INFO] Writing every 10 Runs.
2021-08-13 13:10:09 [INFO] Processing SRX2443838. (1/39)
2021-08-13 13:10:09 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-13 13:10:34 [INFO] Processing SRX2443911. (2/39)
2021-08-13 13:10:34 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-13 13:10:56 [INFO] Processing SRX2443848. (3/39)
2021-08-13 13:10:56 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-13 13:11:25 [INFO] Processing SRX2443872. (4/39)
2021-08-13 13:11:25 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-13 13:11:53 [INFO] Processing SRX2443907. (5/39)
2021-08-13 13:11:53 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-13 13:12:19 [INFO] Processing SRX2443871. (6/39)
2021-08-13 13:12:19 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-13 13:12:52 [INFO] Processing SRX2443846. (7/39)
2021-08-13 13:12:52 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-13 13:13:30 [INFO] Processing SRX2443870. (8/39)
2021-08-13 13:13:30 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-13 13:14:04 [INFO] Processing SRX2443815. (9/39)
2021-08-13 13:14:04 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-13 13:14:34 [INFO] Processing SRX2443837. (10/39)
2021-08-13 13:14:34 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-13 13:15:06 [INFO] Writing to disk...
2021-08-13 13:15:34 [INFO] Processing SRX2443847. (11/39)
2021-08-13 13:15:34 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-13 13:16:10 [INFO] Processing SRX2443835. (12/39)
2021-08-13 13:16:10 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-13 13:16:43 [INFO] Processing SRX2443834. (13/39)
2021-08-13 13:16:43 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-13 13:17:14 [INFO] Processing SRX2443845. (14/39)
2021-08-13 13:17:14 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-13 13:17:53 [INFO] Processing SRX2443844. (15/39)
2021-08-13 13:17:53 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-13 13:18:28 [INFO] Processing SRX2443836. (16/39)
2021-08-13 13:18:28 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-13 13:19:09 [INFO] Processing SRX2443904. (17/39)
2021-08-13 13:19:09 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-13 13:19:44 [INFO] Processing SRX2443867. (18/39)
2021-08-13 13:19:44 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-13 13:20:28 [INFO] Processing SRX2443818. (19/39)
2021-08-13 13:20:28 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-13 13:20:57 [INFO] Processing SRX2443865. (20/39)
2021-08-13 13:20:57 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-13 13:21:46 [INFO] Writing to disk...
2021-08-13 13:22:28 [INFO] Processing SRX2443840. (21/39)
2021-08-13 13:22:28 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-13 13:22:54 [INFO] Processing SRX2443905. (22/39)
2021-08-13 13:22:54 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-13 13:23:26 [INFO] Processing SRX2443869. (23/39)
2021-08-13 13:23:26 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-13 13:24:06 [INFO] Processing SRX2443906. (24/39)
2021-08-13 13:24:06 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-13 13:24:34 [INFO] Processing SRX2443843. (25/39)
2021-08-13 13:24:34 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-13 13:25:06 [INFO] Processing SRX2443814. (26/39)
2021-08-13 13:25:06 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-13 13:25:48 [INFO] Processing SRX2443816. (27/39)
2021-08-13 13:25:48 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-13 13:26:16 [INFO] Processing SRX2443908. (28/39)
2021-08-13 13:26:16 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-13 13:26:41 [INFO] Processing SRX2443842. (29/39)
2021-08-13 13:26:41 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-13 13:27:15 [INFO] Processing SRX2443833. (30/39)
2021-08-13 13:27:15 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-13 13:27:50 [INFO] Writing to disk...
2021-08-13 13:28:43 [INFO] Processing SRX2443820. (31/39)
2021-08-13 13:28:43 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-13 13:29:25 [INFO] Processing SRX2443868. (32/39)
2021-08-13 13:29:25 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-13 13:29:58 [INFO] Processing SRX2443866. (33/39)
2021-08-13 13:29:58 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-13 13:30:39 [INFO] Processing SRX2443909. (34/39)
2021-08-13 13:30:39 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-13 13:31:22 [INFO] Processing SRX2443839. (35/39)
2021-08-13 13:31:22 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-13 13:32:03 [INFO] Processing SRX2443841. (36/39)
2021-08-13 13:32:03 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-13 13:32:47 [INFO] Processing SRX2443910. (37/39)
2021-08-13 13:32:47 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-13 13:33:33 [INFO] Processing SRX2443819. (38/39)
2021-08-13 13:33:33 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-13 13:34:15 [INFO] Processing SRX2443817. (39/39)
2021-08-13 13:34:15 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-13 13:34:55 [INFO] Writing to disk...
2021-08-13 13:36:00 [INFO] Finished.
2021-08-16 11:42:42 [INFO] Starting.
2021-08-16 11:42:42 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-16 11:42:42 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-16 11:42:42 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:42:43 [INFO] Building aggregate for 1kbp_raw network.
2021-08-16 11:42:43 [INFO] Writing every 10 Runs.
2021-08-16 11:42:43 [INFO] Processing SRX2443838. (1/39)
2021-08-16 11:42:43 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-16 11:43:08 [INFO] Processing SRX2443911. (2/39)
2021-08-16 11:43:08 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-16 11:43:35 [INFO] Processing SRX2443848. (3/39)
2021-08-16 11:43:35 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-16 11:44:06 [INFO] Processing SRX2443872. (4/39)
2021-08-16 11:44:06 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-16 11:44:38 [INFO] Processing SRX2443907. (5/39)
2021-08-16 11:44:38 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-16 11:45:09 [INFO] Processing SRX2443871. (6/39)
2021-08-16 11:45:09 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-16 11:45:48 [INFO] Processing SRX2443846. (7/39)
2021-08-16 11:45:48 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-16 11:46:24 [INFO] Processing SRX2443870. (8/39)
2021-08-16 11:46:24 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-16 11:47:05 [INFO] Processing SRX2443815. (9/39)
2021-08-16 11:47:05 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-16 11:47:50 [INFO] Processing SRX2443837. (10/39)
2021-08-16 11:47:50 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-16 11:48:30 [INFO] Writing to disk...
2021-08-16 11:49:08 [INFO] Processing SRX2443847. (11/39)
2021-08-16 11:49:08 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-16 11:49:56 [INFO] Processing SRX2443835. (12/39)
2021-08-16 11:49:56 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-16 11:50:33 [INFO] Processing SRX2443834. (13/39)
2021-08-16 11:50:33 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-16 11:51:06 [INFO] Processing SRX2443845. (14/39)
2021-08-16 11:51:06 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-16 11:51:44 [INFO] Processing SRX2443844. (15/39)
2021-08-16 11:51:44 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-16 11:52:29 [INFO] Processing SRX2443836. (16/39)
2021-08-16 11:52:29 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-16 11:53:20 [INFO] Processing SRX2443904. (17/39)
2021-08-16 11:53:20 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-16 11:54:04 [INFO] Processing SRX2443867. (18/39)
2021-08-16 11:54:04 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-16 11:54:55 [INFO] Processing SRX2443818. (19/39)
2021-08-16 11:54:55 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-16 11:55:34 [INFO] Processing SRX2443865. (20/39)
2021-08-16 11:55:34 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-16 11:56:27 [INFO] Writing to disk...
2021-08-16 11:57:29 [INFO] Processing SRX2443840. (21/39)
2021-08-16 11:57:29 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-16 11:58:08 [INFO] Processing SRX2443905. (22/39)
2021-08-16 11:58:08 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-16 11:58:49 [INFO] Processing SRX2443869. (23/39)
2021-08-16 11:58:50 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-16 11:59:43 [INFO] Processing SRX2443906. (24/39)
2021-08-16 11:59:43 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-16 12:00:32 [INFO] Processing SRX2443843. (25/39)
2021-08-16 12:00:32 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-16 12:01:19 [INFO] Processing SRX2443814. (26/39)
2021-08-16 12:01:19 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-16 12:02:32 [INFO] Processing SRX2443816. (27/39)
2021-08-16 12:02:32 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-16 12:03:29 [INFO] Processing SRX2443908. (28/39)
2021-08-16 12:03:29 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-16 12:04:20 [INFO] Processing SRX2443842. (29/39)
2021-08-16 12:04:20 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-16 12:05:20 [INFO] Processing SRX2443833. (30/39)
2021-08-16 12:05:20 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-16 12:06:21 [INFO] Writing to disk...
2021-08-16 12:07:45 [INFO] Processing SRX2443820. (31/39)
2021-08-16 12:07:45 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-16 12:08:41 [INFO] Processing SRX2443868. (32/39)
2021-08-16 12:08:41 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-16 12:09:31 [INFO] Processing SRX2443866. (33/39)
2021-08-16 12:09:31 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-16 12:10:33 [INFO] Processing SRX2443909. (34/39)
2021-08-16 12:10:33 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-16 12:11:31 [INFO] Processing SRX2443839. (35/39)
2021-08-16 12:11:31 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-16 12:12:28 [INFO] Processing SRX2443841. (36/39)
2021-08-16 12:12:28 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-16 12:13:35 [INFO] Processing SRX2443910. (37/39)
2021-08-16 12:13:35 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-16 12:14:38 [INFO] Processing SRX2443819. (38/39)
2021-08-16 12:14:38 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-16 12:15:44 [INFO] Processing SRX2443817. (39/39)
2021-08-16 12:15:44 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-16 12:16:52 [INFO] Writing to disk...
2021-08-16 12:18:48 [INFO] Finished.
2021-08-21 00:39:27 [INFO] Starting.
2021-08-21 00:39:27 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-21 00:39:27 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-21 00:39:27 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-21 00:39:28 [INFO] Building aggregate for 100kbp_raw network.
2021-08-21 00:39:28 [INFO] Writing every 10 Runs.
2021-08-21 00:39:28 [INFO] Processing SRX2443838. (1/39)
2021-08-21 00:39:28 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-21 00:39:38 [INFO] Processing SRX2443911. (2/39)
2021-08-21 00:39:38 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-21 00:39:50 [INFO] Processing SRX2443848. (3/39)
2021-08-21 00:39:50 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-21 00:40:01 [INFO] Processing SRX2443872. (4/39)
2021-08-21 00:40:01 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-21 00:40:18 [INFO] Processing SRX2443907. (5/39)
2021-08-21 00:40:18 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-21 00:40:31 [INFO] Processing SRX2443871. (6/39)
2021-08-21 00:40:31 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-21 00:40:44 [INFO] Processing SRX2443846. (7/39)
2021-08-21 00:40:44 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-21 00:40:58 [INFO] Processing SRX2443870. (8/39)
2021-08-21 00:40:58 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-21 00:41:16 [INFO] Processing SRX2443815. (9/39)
2021-08-21 00:41:16 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-21 00:41:31 [INFO] Processing SRX2443837. (10/39)
2021-08-21 00:41:31 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-21 00:41:45 [INFO] Writing to disk...
2021-08-21 00:41:55 [INFO] Processing SRX2443847. (11/39)
2021-08-21 00:41:55 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-21 00:42:12 [INFO] Processing SRX2443835. (12/39)
2021-08-21 00:42:12 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-21 00:42:28 [INFO] Processing SRX2443834. (13/39)
2021-08-21 00:42:28 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-21 00:42:39 [INFO] Processing SRX2443845. (14/39)
2021-08-21 00:42:39 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-21 00:42:53 [INFO] Processing SRX2443844. (15/39)
2021-08-21 00:42:53 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-21 00:43:05 [INFO] Processing SRX2443836. (16/39)
2021-08-21 00:43:05 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-21 00:43:24 [INFO] Processing SRX2443904. (17/39)
2021-08-21 00:43:24 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-21 00:43:40 [INFO] Processing SRX2443867. (18/39)
2021-08-21 00:43:40 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-21 00:43:57 [INFO] Processing SRX2443818. (19/39)
2021-08-21 00:43:57 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-21 00:44:07 [INFO] Processing SRX2443865. (20/39)
2021-08-21 00:44:07 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-21 00:44:24 [INFO] Writing to disk...
2021-08-21 00:44:37 [INFO] Processing SRX2443840. (21/39)
2021-08-21 00:44:37 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-21 00:44:46 [INFO] Processing SRX2443905. (22/39)
2021-08-21 00:44:46 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-21 00:45:00 [INFO] Processing SRX2443869. (23/39)
2021-08-21 00:45:00 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-21 00:45:18 [INFO] Processing SRX2443906. (24/39)
2021-08-21 00:45:18 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-21 00:45:32 [INFO] Processing SRX2443843. (25/39)
2021-08-21 00:45:32 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-21 00:45:45 [INFO] Processing SRX2443814. (26/39)
2021-08-21 00:45:45 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-21 00:46:04 [INFO] Processing SRX2443816. (27/39)
2021-08-21 00:46:04 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-21 00:46:18 [INFO] Processing SRX2443908. (28/39)
2021-08-21 00:46:18 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-21 00:46:31 [INFO] Processing SRX2443842. (29/39)
2021-08-21 00:46:31 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-21 00:46:41 [INFO] Processing SRX2443833. (30/39)
2021-08-21 00:46:41 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-21 00:46:57 [INFO] Writing to disk...
2021-08-21 00:47:13 [INFO] Processing SRX2443820. (31/39)
2021-08-21 00:47:13 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-21 00:47:24 [INFO] Processing SRX2443868. (32/39)
2021-08-21 00:47:24 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-21 00:47:35 [INFO] Processing SRX2443866. (33/39)
2021-08-21 00:47:35 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-21 00:47:49 [INFO] Processing SRX2443909. (34/39)
2021-08-21 00:47:49 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-21 00:48:05 [INFO] Processing SRX2443839. (35/39)
2021-08-21 00:48:05 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-21 00:48:14 [INFO] Processing SRX2443841. (36/39)
2021-08-21 00:48:14 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-21 00:48:28 [INFO] Processing SRX2443910. (37/39)
2021-08-21 00:48:28 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-21 00:48:45 [INFO] Processing SRX2443819. (38/39)
2021-08-21 00:48:45 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-21 00:49:00 [INFO] Processing SRX2443817. (39/39)
2021-08-21 00:49:00 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-21 00:49:15 [INFO] Writing to disk...
2021-08-21 00:49:29 [INFO] Finished.
2021-08-23 12:14:18 [INFO] Starting.
2021-08-23 12:14:18 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-23 12:14:18 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-23 12:14:18 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 12:14:19 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 12:14:19 [INFO] Writing every 10 Runs.
2021-08-23 12:14:19 [INFO] Processing SRX2443838. (1/39)
2021-08-23 12:14:19 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-23 12:14:29 [INFO] Processing SRX2443911. (2/39)
2021-08-23 12:14:29 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-23 12:14:36 [INFO] Processing SRX2443848. (3/39)
2021-08-23 12:14:36 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-23 12:14:49 [INFO] Processing SRX2443872. (4/39)
2021-08-23 12:14:49 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-23 12:15:03 [INFO] Processing SRX2443907. (5/39)
2021-08-23 12:15:03 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-23 12:15:13 [INFO] Processing SRX2443871. (6/39)
2021-08-23 12:15:13 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-23 12:15:27 [INFO] Processing SRX2443846. (7/39)
2021-08-23 12:15:27 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-23 12:15:38 [INFO] Processing SRX2443870. (8/39)
2021-08-23 12:15:38 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-23 12:15:49 [INFO] Processing SRX2443815. (9/39)
2021-08-23 12:15:49 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-23 12:16:00 [INFO] Processing SRX2443837. (10/39)
2021-08-23 12:16:00 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-23 12:16:09 [INFO] Writing to disk...
2021-08-23 12:16:11 [INFO] Processing SRX2443847. (11/39)
2021-08-23 12:16:11 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-23 12:16:22 [INFO] Processing SRX2443835. (12/39)
2021-08-23 12:16:22 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-23 12:16:30 [INFO] Processing SRX2443834. (13/39)
2021-08-23 12:16:30 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-23 12:16:36 [INFO] Processing SRX2443845. (14/39)
2021-08-23 12:16:36 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-23 12:16:45 [INFO] Processing SRX2443844. (15/39)
2021-08-23 12:16:45 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-23 12:16:51 [INFO] Processing SRX2443836. (16/39)
2021-08-23 12:16:51 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-23 12:17:01 [INFO] Processing SRX2443904. (17/39)
2021-08-23 12:17:01 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-23 12:17:11 [INFO] Processing SRX2443867. (18/39)
2021-08-23 12:17:11 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-23 12:17:22 [INFO] Processing SRX2443818. (19/39)
2021-08-23 12:17:22 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-23 12:17:31 [INFO] Processing SRX2443865. (20/39)
2021-08-23 12:17:31 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-23 12:17:42 [INFO] Writing to disk...
2021-08-23 12:17:54 [INFO] Processing SRX2443840. (21/39)
2021-08-23 12:17:54 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-23 12:18:00 [INFO] Processing SRX2443905. (22/39)
2021-08-23 12:18:00 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-23 12:18:11 [INFO] Processing SRX2443869. (23/39)
2021-08-23 12:18:11 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-23 12:18:20 [INFO] Processing SRX2443906. (24/39)
2021-08-23 12:18:20 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-23 12:18:31 [INFO] Processing SRX2443843. (25/39)
2021-08-23 12:18:31 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-23 12:18:39 [INFO] Processing SRX2443814. (26/39)
2021-08-23 12:18:39 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-23 12:18:48 [INFO] Processing SRX2443816. (27/39)
2021-08-23 12:18:48 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-23 12:18:58 [INFO] Processing SRX2443908. (28/39)
2021-08-23 12:18:58 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-23 12:19:06 [INFO] Processing SRX2443842. (29/39)
2021-08-23 12:19:06 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-23 12:19:18 [INFO] Processing SRX2443833. (30/39)
2021-08-23 12:19:18 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-23 12:19:24 [INFO] Writing to disk...
2021-08-23 12:19:33 [INFO] Processing SRX2443820. (31/39)
2021-08-23 12:19:33 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-23 12:19:44 [INFO] Processing SRX2443868. (32/39)
2021-08-23 12:19:44 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-23 12:19:52 [INFO] Processing SRX2443866. (33/39)
2021-08-23 12:19:52 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-23 12:20:03 [INFO] Processing SRX2443909. (34/39)
2021-08-23 12:20:03 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-23 12:20:16 [INFO] Processing SRX2443839. (35/39)
2021-08-23 12:20:16 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-23 12:20:25 [INFO] Processing SRX2443841. (36/39)
2021-08-23 12:20:25 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-23 12:20:34 [INFO] Processing SRX2443910. (37/39)
2021-08-23 12:20:34 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-23 12:20:45 [INFO] Processing SRX2443819. (38/39)
2021-08-23 12:20:45 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-23 12:20:54 [INFO] Processing SRX2443817. (39/39)
2021-08-23 12:20:54 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-23 12:21:05 [INFO] Writing to disk...
2021-08-23 12:21:16 [INFO] Finished.
2021-08-23 15:12:07 [INFO] Starting.
2021-08-23 15:12:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/
2021-08-23 15:12:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP094854/aggregate.hdf5
2021-08-23 15:12:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 15:12:07 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 15:12:07 [INFO] Writing every 10 Runs.
2021-08-23 15:12:07 [INFO] Processing SRX2443838. (1/39)
2021-08-23 15:12:07 [INFO] Processing SRX2443838-SRR5129633. (1/39)
2021-08-23 15:12:15 [INFO] Processing SRX2443911. (2/39)
2021-08-23 15:12:15 [INFO] Processing SRX2443911-SRR5129706. (2/39)
2021-08-23 15:12:23 [INFO] Processing SRX2443848. (3/39)
2021-08-23 15:12:23 [INFO] Processing SRX2443848-SRR5129643. (3/39)
2021-08-23 15:12:30 [INFO] Processing SRX2443872. (4/39)
2021-08-23 15:12:30 [INFO] Processing SRX2443872-SRR5129667. (4/39)
2021-08-23 15:12:38 [INFO] Processing SRX2443907. (5/39)
2021-08-23 15:12:38 [INFO] Processing SRX2443907-SRR5129702. (5/39)
2021-08-23 15:12:44 [INFO] Processing SRX2443871. (6/39)
2021-08-23 15:12:44 [INFO] Processing SRX2443871-SRR5129666. (6/39)
2021-08-23 15:12:51 [INFO] Processing SRX2443846. (7/39)
2021-08-23 15:12:51 [INFO] Processing SRX2443846-SRR5129641. (7/39)
2021-08-23 15:12:59 [INFO] Processing SRX2443870. (8/39)
2021-08-23 15:12:59 [INFO] Processing SRX2443870-SRR5129665. (8/39)
2021-08-23 15:13:08 [INFO] Processing SRX2443815. (9/39)
2021-08-23 15:13:08 [INFO] Processing SRX2443815-SRR5129610. (9/39)
2021-08-23 15:13:16 [INFO] Processing SRX2443837. (10/39)
2021-08-23 15:13:16 [INFO] Processing SRX2443837-SRR5129632. (10/39)
2021-08-23 15:13:24 [INFO] Writing to disk...
2021-08-23 15:13:24 [INFO] Processing SRX2443847. (11/39)
2021-08-23 15:13:24 [INFO] Processing SRX2443847-SRR5129642. (11/39)
2021-08-23 15:13:34 [INFO] Processing SRX2443835. (12/39)
2021-08-23 15:13:34 [INFO] Processing SRX2443835-SRR5129630. (12/39)
2021-08-23 15:13:42 [INFO] Processing SRX2443834. (13/39)
2021-08-23 15:13:42 [INFO] Processing SRX2443834-SRR5129629. (13/39)
2021-08-23 15:13:50 [INFO] Processing SRX2443845. (14/39)
2021-08-23 15:13:50 [INFO] Processing SRX2443845-SRR5129640. (14/39)
2021-08-23 15:13:58 [INFO] Processing SRX2443844. (15/39)
2021-08-23 15:13:58 [INFO] Processing SRX2443844-SRR5129639. (15/39)
2021-08-23 15:14:05 [INFO] Processing SRX2443836. (16/39)
2021-08-23 15:14:05 [INFO] Processing SRX2443836-SRR5129631. (16/39)
2021-08-23 15:14:12 [INFO] Processing SRX2443904. (17/39)
2021-08-23 15:14:12 [INFO] Processing SRX2443904-SRR5129699. (17/39)
2021-08-23 15:14:20 [INFO] Processing SRX2443867. (18/39)
2021-08-23 15:14:20 [INFO] Processing SRX2443867-SRR5129662. (18/39)
2021-08-23 15:14:29 [INFO] Processing SRX2443818. (19/39)
2021-08-23 15:14:29 [INFO] Processing SRX2443818-SRR5129613. (19/39)
2021-08-23 15:14:36 [INFO] Processing SRX2443865. (20/39)
2021-08-23 15:14:36 [INFO] Processing SRX2443865-SRR5129660. (20/39)
2021-08-23 15:14:44 [INFO] Writing to disk...
2021-08-23 15:14:45 [INFO] Processing SRX2443840. (21/39)
2021-08-23 15:14:45 [INFO] Processing SRX2443840-SRR5129635. (21/39)
2021-08-23 15:14:52 [INFO] Processing SRX2443905. (22/39)
2021-08-23 15:14:52 [INFO] Processing SRX2443905-SRR5129700. (22/39)
2021-08-23 15:14:59 [INFO] Processing SRX2443869. (23/39)
2021-08-23 15:14:59 [INFO] Processing SRX2443869-SRR5129664. (23/39)
2021-08-23 15:15:08 [INFO] Processing SRX2443906. (24/39)
2021-08-23 15:15:08 [INFO] Processing SRX2443906-SRR5129701. (24/39)
2021-08-23 15:15:15 [INFO] Processing SRX2443843. (25/39)
2021-08-23 15:15:15 [INFO] Processing SRX2443843-SRR5129638. (25/39)
2021-08-23 15:15:22 [INFO] Processing SRX2443814. (26/39)
2021-08-23 15:15:22 [INFO] Processing SRX2443814-SRR5129609. (26/39)
2021-08-23 15:15:31 [INFO] Processing SRX2443816. (27/39)
2021-08-23 15:15:31 [INFO] Processing SRX2443816-SRR5129611. (27/39)
2021-08-23 15:15:38 [INFO] Processing SRX2443908. (28/39)
2021-08-23 15:15:38 [INFO] Processing SRX2443908-SRR5129703. (28/39)
2021-08-23 15:15:46 [INFO] Processing SRX2443842. (29/39)
2021-08-23 15:15:46 [INFO] Processing SRX2443842-SRR5129637. (29/39)
2021-08-23 15:15:53 [INFO] Processing SRX2443833. (30/39)
2021-08-23 15:15:53 [INFO] Processing SRX2443833-SRR5129628. (30/39)
2021-08-23 15:16:00 [INFO] Writing to disk...
2021-08-23 15:16:10 [INFO] Processing SRX2443820. (31/39)
2021-08-23 15:16:10 [INFO] Processing SRX2443820-SRR5129615. (31/39)
2021-08-23 15:16:18 [INFO] Processing SRX2443868. (32/39)
2021-08-23 15:16:18 [INFO] Processing SRX2443868-SRR5129663. (32/39)
2021-08-23 15:16:26 [INFO] Processing SRX2443866. (33/39)
2021-08-23 15:16:26 [INFO] Processing SRX2443866-SRR5129661. (33/39)
2021-08-23 15:16:34 [INFO] Processing SRX2443909. (34/39)
2021-08-23 15:16:34 [INFO] Processing SRX2443909-SRR5129704. (34/39)
2021-08-23 15:16:44 [INFO] Processing SRX2443839. (35/39)
2021-08-23 15:16:44 [INFO] Processing SRX2443839-SRR5129634. (35/39)
2021-08-23 15:16:52 [INFO] Processing SRX2443841. (36/39)
2021-08-23 15:16:52 [INFO] Processing SRX2443841-SRR5129636. (36/39)
2021-08-23 15:17:00 [INFO] Processing SRX2443910. (37/39)
2021-08-23 15:17:00 [INFO] Processing SRX2443910-SRR5129705. (37/39)
2021-08-23 15:17:08 [INFO] Processing SRX2443819. (38/39)
2021-08-23 15:17:08 [INFO] Processing SRX2443819-SRR5129614. (38/39)
2021-08-23 15:17:15 [INFO] Processing SRX2443817. (39/39)
2021-08-23 15:17:15 [INFO] Processing SRX2443817-SRR5129612. (39/39)
2021-08-23 15:17:22 [INFO] Writing to disk...
2021-08-23 15:17:27 [INFO] Finished.