2021-06-10 04:09:08 [INFO] Starting.
2021-06-10 04:09:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-06-10 04:09:08 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-06-10 04:09:08 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:09:08 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:09:08 [INFO] Building aggregate.
2021-06-10 04:09:08 [INFO] Writing every 10 Runs.
2021-06-10 04:09:08 [INFO] Processing SRX2559008. (1/4)
2021-06-10 04:09:08 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-06-10 04:09:38 [INFO] Processing SRX2559010. (2/4)
2021-06-10 04:09:38 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-06-10 04:09:56 [INFO] Processing SRX2559007. (3/4)
2021-06-10 04:09:56 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-06-10 04:10:12 [INFO] Processing SRX2559009. (4/4)
2021-06-10 04:10:12 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-06-10 04:10:28 [INFO] Writing to disk...
2021-06-10 04:10:36 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX2559008. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-02 18:01:07 [INFO] Processing SRX2559010. (2/4)
2021-08-02 18:01:07 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-02 18:24:21 [INFO] Processing SRX2559007. (3/4)
2021-08-02 18:24:21 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-02 18:31:33 [INFO] Processing SRX2559009. (4/4)
2021-08-02 18:31:33 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-02 18:38:47 [INFO] Writing to disk...
2021-08-02 18:39:34 [INFO] Finished.
2021-08-12 14:32:34 [INFO] Starting.
2021-08-12 14:32:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-12 14:32:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-12 14:32:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:32:35 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:32:35 [INFO] Writing every 10 Runs.
2021-08-12 14:32:35 [INFO] Processing SRX2559008. (1/4)
2021-08-12 14:32:35 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-12 14:32:56 [INFO] Processing SRX2559010. (2/4)
2021-08-12 14:32:56 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-12 14:33:17 [INFO] Processing SRX2559007. (3/4)
2021-08-12 14:33:17 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-12 14:33:34 [INFO] Processing SRX2559009. (4/4)
2021-08-12 14:33:34 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-12 14:33:56 [INFO] Writing to disk...
2021-08-12 14:34:02 [INFO] Finished.
2021-08-12 15:11:12 [INFO] Starting.
2021-08-12 15:11:12 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-12 15:11:12 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-12 15:11:12 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:11:13 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:11:13 [INFO] Writing every 10 Runs.
2021-08-12 15:11:13 [INFO] Processing SRX2559008. (1/4)
2021-08-12 15:11:13 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-12 15:11:34 [INFO] Processing SRX2559010. (2/4)
2021-08-12 15:11:34 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-12 15:11:52 [INFO] Processing SRX2559007. (3/4)
2021-08-12 15:11:52 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-12 15:12:08 [INFO] Processing SRX2559009. (4/4)
2021-08-12 15:12:08 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-12 15:12:26 [INFO] Writing to disk...
2021-08-12 15:12:30 [INFO] Finished.
2021-08-12 15:46:07 [INFO] Starting.
2021-08-12 15:46:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-12 15:46:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-12 15:46:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:46:09 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:46:09 [INFO] Writing every 10 Runs.
2021-08-12 15:46:09 [INFO] Processing SRX2559008. (1/4)
2021-08-12 15:46:09 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-12 15:46:32 [INFO] Processing SRX2559010. (2/4)
2021-08-12 15:46:32 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-12 15:46:59 [INFO] Processing SRX2559007. (3/4)
2021-08-12 15:46:59 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-12 15:47:20 [INFO] Processing SRX2559009. (4/4)
2021-08-12 15:47:20 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-12 15:47:42 [INFO] Writing to disk...
2021-08-12 15:47:50 [INFO] Finished.
2021-08-12 16:34:36 [INFO] Starting.
2021-08-12 16:34:36 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-12 16:34:36 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-12 16:34:36 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:37 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:34:37 [INFO] Writing every 10 Runs.
2021-08-12 16:34:37 [INFO] Processing SRX2559008. (1/4)
2021-08-12 16:34:37 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-12 16:35:03 [INFO] Processing SRX2559010. (2/4)
2021-08-12 16:35:03 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-12 16:35:32 [INFO] Processing SRX2559007. (3/4)
2021-08-12 16:35:32 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-12 16:36:00 [INFO] Processing SRX2559009. (4/4)
2021-08-12 16:36:00 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-12 16:36:33 [INFO] Writing to disk...
2021-08-12 16:36:42 [INFO] Finished.
2021-08-20 18:01:40 [INFO] Starting.
2021-08-20 18:01:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-20 18:01:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-20 18:01:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 18:01:44 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 18:01:44 [INFO] Writing every 10 Runs.
2021-08-20 18:01:44 [INFO] Processing SRX2559008. (1/4)
2021-08-20 18:01:44 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-20 18:02:33 [INFO] Processing SRX2559010. (2/4)
2021-08-20 18:02:33 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-20 18:02:50 [INFO] Processing SRX2559007. (3/4)
2021-08-20 18:02:50 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-20 18:04:01 [INFO] Processing SRX2559009. (4/4)
2021-08-20 18:04:01 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-20 18:04:16 [INFO] Writing to disk...
2021-08-20 18:04:19 [INFO] Finished.
2021-08-23 11:30:50 [INFO] Starting.
2021-08-23 11:30:50 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-23 11:30:50 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-23 11:30:50 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:51 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:51 [INFO] Writing every 10 Runs.
2021-08-23 11:30:51 [INFO] Processing SRX2559008. (1/4)
2021-08-23 11:30:51 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-23 11:31:03 [INFO] Processing SRX2559010. (2/4)
2021-08-23 11:31:03 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-23 11:31:12 [INFO] Processing SRX2559007. (3/4)
2021-08-23 11:31:12 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-23 11:31:21 [INFO] Processing SRX2559009. (4/4)
2021-08-23 11:31:21 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-23 11:31:31 [INFO] Writing to disk...
2021-08-23 11:31:32 [INFO] Finished.
2021-08-23 13:17:07 [INFO] Starting.
2021-08-23 13:17:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/
2021-08-23 13:17:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP099610/aggregate.hdf5
2021-08-23 13:17:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:17:08 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:17:08 [INFO] Writing every 10 Runs.
2021-08-23 13:17:08 [INFO] Processing SRX2559008. (1/4)
2021-08-23 13:17:08 [INFO] Processing SRX2559008-SRR5253472. (1/4)
2021-08-23 13:17:15 [INFO] Processing SRX2559010. (2/4)
2021-08-23 13:17:15 [INFO] Processing SRX2559010-SRR5253474. (2/4)
2021-08-23 13:17:24 [INFO] Processing SRX2559007. (3/4)
2021-08-23 13:17:24 [INFO] Processing SRX2559007-SRR5253471. (3/4)
2021-08-23 13:17:30 [INFO] Processing SRX2559009. (4/4)
2021-08-23 13:17:30 [INFO] Processing SRX2559009-SRR5253473. (4/4)
2021-08-23 13:17:38 [INFO] Writing to disk...
2021-08-23 13:17:39 [INFO] Finished.