2021-06-10 04:09:05 [INFO] Starting.
2021-06-10 04:09:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-06-10 04:09:05 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-06-10 04:09:05 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:09:05 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:09:06 [INFO] Building aggregate.
2021-06-10 04:09:06 [INFO] Writing every 10 Runs.
2021-06-10 04:09:06 [INFO] Processing SRX2912099. (1/4)
2021-06-10 04:09:06 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-06-10 04:09:07 [INFO] Processing SRX2912097. (2/4)
2021-06-10 04:09:07 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-06-10 04:09:07 [INFO] Processing SRX2912096. (3/4)
2021-06-10 04:09:07 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-06-10 04:09:08 [INFO] Processing SRX2912098. (4/4)
2021-06-10 04:09:08 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-06-10 04:09:09 [INFO] Writing to disk...
2021-06-10 04:09:10 [INFO] Finished.
2021-08-02 17:09:00 [INFO] Starting.
2021-08-02 17:09:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-02 17:09:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-02 17:09:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:09:01 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:09:01 [INFO] Writing every 10 Runs.
2021-08-02 17:09:01 [INFO] Processing SRX2912099. (1/4)
2021-08-02 17:09:01 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-02 17:11:04 [INFO] Processing SRX2912097. (2/4)
2021-08-02 17:11:04 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-02 17:31:10 [INFO] Processing SRX2912096. (3/4)
2021-08-02 17:31:10 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-02 17:36:59 [INFO] Processing SRX2912098. (4/4)
2021-08-02 17:36:59 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-02 17:42:17 [INFO] Writing to disk...
2021-08-02 17:43:04 [INFO] Finished.
2021-08-12 14:32:34 [INFO] Starting.
2021-08-12 14:32:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-12 14:32:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-12 14:32:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:32:36 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:32:36 [INFO] Writing every 10 Runs.
2021-08-12 14:32:36 [INFO] Processing SRX2912099. (1/4)
2021-08-12 14:32:36 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-12 14:32:37 [INFO] Processing SRX2912097. (2/4)
2021-08-12 14:32:37 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-12 14:32:38 [INFO] Processing SRX2912096. (3/4)
2021-08-12 14:32:38 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-12 14:32:38 [INFO] Processing SRX2912098. (4/4)
2021-08-12 14:32:38 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-12 14:32:39 [INFO] Writing to disk...
2021-08-12 14:32:40 [INFO] Finished.
2021-08-12 15:11:06 [INFO] Starting.
2021-08-12 15:11:06 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-12 15:11:06 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-12 15:11:06 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:11:06 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:11:06 [INFO] Writing every 10 Runs.
2021-08-12 15:11:06 [INFO] Processing SRX2912099. (1/4)
2021-08-12 15:11:06 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-12 15:11:07 [INFO] Processing SRX2912097. (2/4)
2021-08-12 15:11:07 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-12 15:11:08 [INFO] Processing SRX2912096. (3/4)
2021-08-12 15:11:08 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-12 15:11:09 [INFO] Processing SRX2912098. (4/4)
2021-08-12 15:11:09 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-12 15:11:10 [INFO] Writing to disk...
2021-08-12 15:11:10 [INFO] Finished.
2021-08-12 15:46:03 [INFO] Starting.
2021-08-12 15:46:03 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-12 15:46:03 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-12 15:46:03 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:46:04 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:46:04 [INFO] Writing every 10 Runs.
2021-08-12 15:46:04 [INFO] Processing SRX2912099. (1/4)
2021-08-12 15:46:04 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-12 15:46:05 [INFO] Processing SRX2912097. (2/4)
2021-08-12 15:46:05 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-12 15:46:06 [INFO] Processing SRX2912096. (3/4)
2021-08-12 15:46:06 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-12 15:46:07 [INFO] Processing SRX2912098. (4/4)
2021-08-12 15:46:07 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-12 15:46:08 [INFO] Writing to disk...
2021-08-12 15:46:09 [INFO] Finished.
2021-08-12 16:34:28 [INFO] Starting.
2021-08-12 16:34:28 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-12 16:34:28 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-12 16:34:28 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:29 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:34:29 [INFO] Writing every 10 Runs.
2021-08-12 16:34:29 [INFO] Processing SRX2912099. (1/4)
2021-08-12 16:34:29 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-12 16:34:30 [INFO] Processing SRX2912097. (2/4)
2021-08-12 16:34:30 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-12 16:34:32 [INFO] Processing SRX2912096. (3/4)
2021-08-12 16:34:32 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-12 16:34:33 [INFO] Processing SRX2912098. (4/4)
2021-08-12 16:34:33 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-12 16:34:34 [INFO] Writing to disk...
2021-08-12 16:34:35 [INFO] Finished.
2021-08-20 18:01:11 [INFO] Starting.
2021-08-20 18:01:11 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-20 18:01:11 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-20 18:01:11 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 18:01:15 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 18:01:15 [INFO] Writing every 10 Runs.
2021-08-20 18:01:15 [INFO] Processing SRX2912099. (1/4)
2021-08-20 18:01:15 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-20 18:01:17 [INFO] Processing SRX2912097. (2/4)
2021-08-20 18:01:17 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-20 18:01:19 [INFO] Processing SRX2912096. (3/4)
2021-08-20 18:01:19 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-20 18:01:32 [INFO] Processing SRX2912098. (4/4)
2021-08-20 18:01:32 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-20 18:01:36 [INFO] Writing to disk...
2021-08-20 18:01:37 [INFO] Finished.
2021-08-23 11:30:46 [INFO] Starting.
2021-08-23 11:30:46 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-23 11:30:46 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-23 11:30:46 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:47 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:47 [INFO] Writing every 10 Runs.
2021-08-23 11:30:47 [INFO] Processing SRX2912099. (1/4)
2021-08-23 11:30:47 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-23 11:30:47 [INFO] Processing SRX2912097. (2/4)
2021-08-23 11:30:47 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-23 11:30:48 [INFO] Processing SRX2912096. (3/4)
2021-08-23 11:30:48 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-23 11:30:49 [INFO] Processing SRX2912098. (4/4)
2021-08-23 11:30:49 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-23 11:30:49 [INFO] Writing to disk...
2021-08-23 11:30:50 [INFO] Finished.
2021-08-23 13:17:08 [INFO] Starting.
2021-08-23 13:17:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/
2021-08-23 13:17:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP109036/aggregate.hdf5
2021-08-23 13:17:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:17:08 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:17:08 [INFO] Writing every 10 Runs.
2021-08-23 13:17:08 [INFO] Processing SRX2912099. (1/4)
2021-08-23 13:17:08 [INFO] Processing SRX2912099-SRR5676599. (1/4)
2021-08-23 13:17:09 [INFO] Processing SRX2912097. (2/4)
2021-08-23 13:17:09 [INFO] Processing SRX2912097-SRR5676597. (2/4)
2021-08-23 13:17:10 [INFO] Processing SRX2912096. (3/4)
2021-08-23 13:17:10 [INFO] Processing SRX2912096-SRR5676596. (3/4)
2021-08-23 13:17:10 [INFO] Processing SRX2912098. (4/4)
2021-08-23 13:17:10 [INFO] Processing SRX2912098-SRR5676598. (4/4)
2021-08-23 13:17:11 [INFO] Writing to disk...
2021-08-23 13:17:11 [INFO] Finished.