2021-06-10 03:33:09 [INFO] Starting.
2021-06-10 03:33:09 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-06-10 03:33:09 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-06-10 03:33:09 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:33:09 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:33:10 [INFO] Building aggregate.
2021-06-10 03:33:10 [INFO] Writing every 10 Runs.
2021-06-10 03:33:10 [INFO] Processing SRX2978653. (1/3)
2021-06-10 03:33:10 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-06-10 03:33:23 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-06-10 03:33:39 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-06-10 03:34:16 [INFO] Processing SRX2978654. (2/3)
2021-06-10 03:34:16 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-06-10 03:34:33 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-06-10 03:34:48 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-06-10 03:35:15 [INFO] Processing SRX2978652. (3/3)
2021-06-10 03:35:15 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-06-10 03:35:32 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-06-10 03:35:47 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-06-10 03:36:05 [INFO] Writing to disk...
2021-06-10 03:36:27 [INFO] Finished.
2021-08-02 17:09:00 [INFO] Starting.
2021-08-02 17:09:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-02 17:09:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-02 17:09:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:09:01 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:09:01 [INFO] Writing every 10 Runs.
2021-08-02 17:09:01 [INFO] Processing SRX2978653. (1/3)
2021-08-02 17:09:01 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-02 17:25:22 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-04 22:06:16 [INFO] Starting.
2021-08-04 22:06:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-04 22:06:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-04 22:06:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:06:17 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:06:17 [INFO] Writing every 10 Runs.
2021-08-04 22:06:17 [INFO] Processing SRX2978653. (1/3)
2021-08-04 22:06:17 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-04 22:09:57 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-04 22:20:09 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-04 22:27:26 [INFO] Processing SRX2978654. (2/3)
2021-08-04 22:27:26 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-04 22:34:23 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-04 22:41:18 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-04 22:48:15 [INFO] Processing SRX2978652. (3/3)
2021-08-04 22:48:15 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-04 22:55:16 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-04 23:02:25 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-04 23:09:26 [INFO] Writing to disk...
2021-08-04 23:10:46 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX2978653. (1/3)
2021-08-12 14:31:18 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-12 14:31:40 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-12 14:32:04 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-12 14:32:28 [INFO] Processing SRX2978654. (2/3)
2021-08-12 14:32:28 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-12 14:32:58 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-12 14:33:22 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-12 14:33:53 [INFO] Processing SRX2978652. (3/3)
2021-08-12 14:33:53 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-12 14:34:26 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-12 14:34:51 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-12 14:35:21 [INFO] Writing to disk...
2021-08-12 14:35:37 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX2978653. (1/3)
2021-08-12 15:09:40 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-12 15:09:57 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-12 15:10:19 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-12 15:10:39 [INFO] Processing SRX2978654. (2/3)
2021-08-12 15:10:39 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-12 15:11:01 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-12 15:11:22 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-12 15:11:44 [INFO] Processing SRX2978652. (3/3)
2021-08-12 15:11:44 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-12 15:12:09 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-12 15:12:34 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-12 15:12:58 [INFO] Writing to disk...
2021-08-12 15:13:12 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX2978653. (1/3)
2021-08-12 15:44:40 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-12 15:45:03 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-12 15:45:31 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-12 15:45:55 [INFO] Processing SRX2978654. (2/3)
2021-08-12 15:45:55 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-12 15:46:20 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-12 15:46:50 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-12 15:47:22 [INFO] Processing SRX2978652. (3/3)
2021-08-12 15:47:22 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-12 15:47:53 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-12 15:48:26 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-12 15:48:58 [INFO] Writing to disk...
2021-08-12 15:49:16 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX2978653. (1/3)
2021-08-12 16:31:35 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-12 16:32:00 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-12 16:32:27 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-12 16:32:56 [INFO] Processing SRX2978654. (2/3)
2021-08-12 16:32:56 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-12 16:33:27 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-12 16:34:01 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-12 16:34:31 [INFO] Processing SRX2978652. (3/3)
2021-08-12 16:34:31 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-12 16:35:05 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-12 16:35:40 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-12 16:36:18 [INFO] Writing to disk...
2021-08-12 16:36:41 [INFO] Finished.
2021-08-20 17:55:45 [INFO] Starting.
2021-08-20 17:55:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-20 17:55:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-20 17:55:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:55:46 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:55:46 [INFO] Writing every 10 Runs.
2021-08-20 17:55:46 [INFO] Processing SRX2978653. (1/3)
2021-08-20 17:55:46 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-20 17:56:04 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-20 17:56:23 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-20 17:56:41 [INFO] Processing SRX2978654. (2/3)
2021-08-20 17:56:41 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-20 17:57:00 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-20 17:57:20 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-20 17:57:41 [INFO] Processing SRX2978652. (3/3)
2021-08-20 17:57:41 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-20 17:58:01 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-20 17:58:22 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-20 17:58:44 [INFO] Writing to disk...
2021-08-20 17:59:00 [INFO] Finished.
2021-08-23 11:28:01 [INFO] Starting.
2021-08-23 11:28:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-23 11:28:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-23 11:28:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:02 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:02 [INFO] Writing every 10 Runs.
2021-08-23 11:28:02 [INFO] Processing SRX2978653. (1/3)
2021-08-23 11:28:02 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-23 11:28:12 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-23 11:28:22 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-23 11:28:32 [INFO] Processing SRX2978654. (2/3)
2021-08-23 11:28:32 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-23 11:28:41 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-23 11:28:53 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-23 11:29:03 [INFO] Processing SRX2978652. (3/3)
2021-08-23 11:29:03 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-23 11:29:12 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-23 11:29:23 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-23 11:29:33 [INFO] Writing to disk...
2021-08-23 11:29:35 [INFO] Finished.
2021-08-23 13:15:50 [INFO] Starting.
2021-08-23 13:15:50 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/
2021-08-23 13:15:50 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP110964/aggregate.hdf5
2021-08-23 13:15:50 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:51 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:51 [INFO] Writing every 10 Runs.
2021-08-23 13:15:51 [INFO] Processing SRX2978653. (1/3)
2021-08-23 13:15:51 [INFO] Processing SRX2978653-SRR5799160. (1/9)
2021-08-23 13:15:58 [INFO] Processing SRX2978653-SRR5799161. (2/9)
2021-08-23 13:16:03 [INFO] Processing SRX2978653-SRR5799162. (3/9)
2021-08-23 13:16:10 [INFO] Processing SRX2978654. (2/3)
2021-08-23 13:16:10 [INFO] Processing SRX2978654-SRR5799163. (4/9)
2021-08-23 13:16:14 [INFO] Processing SRX2978654-SRR5799165. (5/9)
2021-08-23 13:16:21 [INFO] Processing SRX2978654-SRR5799164. (6/9)
2021-08-23 13:16:27 [INFO] Processing SRX2978652. (3/3)
2021-08-23 13:16:27 [INFO] Processing SRX2978652-SRR5799158. (7/9)
2021-08-23 13:16:33 [INFO] Processing SRX2978652-SRR5799159. (8/9)
2021-08-23 13:16:41 [INFO] Processing SRX2978652-SRR5799157. (9/9)
2021-08-23 13:16:48 [INFO] Writing to disk...
2021-08-23 13:16:49 [INFO] Finished.