2021-06-10 04:02:02 [INFO] Starting.
2021-06-10 04:02:02 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-06-10 04:02:02 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-06-10 04:02:02 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:02:02 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:02:03 [INFO] Building aggregate.
2021-06-10 04:02:03 [INFO] Writing every 10 Runs.
2021-06-10 04:02:03 [INFO] Processing SRX3974090. (1/1)
2021-06-10 04:02:03 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-06-10 04:02:24 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-06-10 04:02:26 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-06-10 04:02:37 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-06-10 04:02:40 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-06-10 04:02:55 [INFO] Writing to disk...
2021-06-10 04:02:58 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX3974090. (1/1)
2021-08-02 17:08:56 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-04 22:06:59 [INFO] Starting.
2021-08-04 22:06:59 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-04 22:06:59 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-04 22:06:59 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:06:59 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:06:59 [INFO] Writing every 10 Runs.
2021-08-04 22:06:59 [INFO] Processing SRX3974090. (1/1)
2021-08-04 22:06:59 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-04 22:10:26 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-04 22:18:35 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-04 22:25:30 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-04 22:31:28 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-04 22:38:22 [INFO] Writing to disk...
2021-08-04 22:39:15 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX3974090. (1/1)
2021-08-12 14:31:18 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-12 14:31:32 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-12 14:31:35 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-12 14:31:48 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-12 14:31:51 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-12 14:32:05 [INFO] Writing to disk...
2021-08-12 14:32:08 [INFO] Finished.
2021-08-12 15:10:04 [INFO] Starting.
2021-08-12 15:10:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-12 15:10:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-12 15:10:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:10:05 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:10:05 [INFO] Writing every 10 Runs.
2021-08-12 15:10:05 [INFO] Processing SRX3974090. (1/1)
2021-08-12 15:10:05 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-12 15:10:20 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-12 15:10:23 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-12 15:10:34 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-12 15:10:37 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-12 15:10:50 [INFO] Writing to disk...
2021-08-12 15:10:54 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX3974090. (1/1)
2021-08-12 15:44:40 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-12 15:44:54 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-12 15:44:56 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-12 15:45:10 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-12 15:45:14 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-12 15:45:27 [INFO] Writing to disk...
2021-08-12 15:45:31 [INFO] Finished.
2021-08-12 16:33:15 [INFO] Starting.
2021-08-12 16:33:15 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-12 16:33:15 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-12 16:33:15 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:33:16 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:33:16 [INFO] Writing every 10 Runs.
2021-08-12 16:33:16 [INFO] Processing SRX3974090. (1/1)
2021-08-12 16:33:16 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-12 16:33:30 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-12 16:33:33 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-12 16:33:48 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-12 16:33:53 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-12 16:34:09 [INFO] Writing to disk...
2021-08-12 16:34:13 [INFO] Finished.
2021-08-20 17:59:16 [INFO] Starting.
2021-08-20 17:59:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-20 17:59:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-20 17:59:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:18 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:18 [INFO] Writing every 10 Runs.
2021-08-20 17:59:18 [INFO] Processing SRX3974090. (1/1)
2021-08-20 17:59:18 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-20 17:59:30 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-20 17:59:33 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-20 17:59:44 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-20 17:59:47 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-20 17:59:58 [INFO] Writing to disk...
2021-08-20 18:00:00 [INFO] Finished.
2021-08-23 11:30:26 [INFO] Starting.
2021-08-23 11:30:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-23 11:30:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-23 11:30:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:27 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:27 [INFO] Writing every 10 Runs.
2021-08-23 11:30:27 [INFO] Processing SRX3974090. (1/1)
2021-08-23 11:30:27 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-23 11:30:33 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-23 11:30:35 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-23 11:30:43 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-23 11:30:44 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-23 11:30:52 [INFO] Writing to disk...
2021-08-23 11:30:53 [INFO] Finished.
2021-08-23 13:16:51 [INFO] Starting.
2021-08-23 13:16:52 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/
2021-08-23 13:16:52 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP141229/aggregate.hdf5
2021-08-23 13:16:52 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:52 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:52 [INFO] Writing every 10 Runs.
2021-08-23 13:16:52 [INFO] Processing SRX3974090. (1/1)
2021-08-23 13:16:52 [INFO] Processing SRX3974090-SRR7042060. (1/5)
2021-08-23 13:16:58 [INFO] Processing SRX3974090-SRR7042057. (2/5)
2021-08-23 13:16:59 [INFO] Processing SRX3974090-SRR7042058. (3/5)
2021-08-23 13:17:04 [INFO] Processing SRX3974090-SRR7042059. (4/5)
2021-08-23 13:17:05 [INFO] Processing SRX3974090-SRR7042061. (5/5)
2021-08-23 13:17:11 [INFO] Writing to disk...
2021-08-23 13:17:12 [INFO] Finished.