2021-06-10 03:55:37 [INFO] Starting.
2021-06-10 03:55:37 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-06-10 03:55:37 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-06-10 03:55:37 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:55:37 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:55:39 [INFO] Building aggregate.
2021-06-10 03:55:39 [INFO] Writing every 10 Runs.
2021-06-10 03:55:39 [INFO] Processing SRX4605775. (1/3)
2021-06-10 03:55:39 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-06-10 03:56:17 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-06-10 03:56:45 [INFO] Processing SRX4528470. (2/3)
2021-06-10 03:56:45 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-06-10 03:57:03 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-06-10 03:57:37 [INFO] Processing SRX4553878. (3/3)
2021-06-10 03:57:37 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-06-10 03:57:58 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-06-10 03:58:24 [INFO] Writing to disk...
2021-06-10 03:58:46 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX4605775. (1/3)
2021-08-02 17:08:56 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-02 17:15:38 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-02 17:25:07 [INFO] Processing SRX4528470. (2/3)
2021-08-02 17:25:07 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-02 17:32:21 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-02 17:39:41 [INFO] Processing SRX4553878. (3/3)
2021-08-02 17:39:41 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-02 17:46:59 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-02 17:54:35 [INFO] Writing to disk...
2021-08-02 17:55:59 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX4605775. (1/3)
2021-08-12 14:31:18 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-12 14:31:47 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-12 14:32:19 [INFO] Processing SRX4528470. (2/3)
2021-08-12 14:32:19 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-12 14:32:44 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-12 14:33:11 [INFO] Processing SRX4553878. (3/3)
2021-08-12 14:33:11 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-12 14:33:40 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-12 14:34:10 [INFO] Writing to disk...
2021-08-12 14:34:23 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX4605775. (1/3)
2021-08-12 15:09:40 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-12 15:10:04 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-12 15:10:29 [INFO] Processing SRX4528470. (2/3)
2021-08-12 15:10:29 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-12 15:10:48 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-12 15:11:12 [INFO] Processing SRX4553878. (3/3)
2021-08-12 15:11:12 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-12 15:11:32 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-12 15:11:55 [INFO] Writing to disk...
2021-08-12 15:12:07 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX4605775. (1/3)
2021-08-12 15:44:40 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-12 15:45:13 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-12 15:45:43 [INFO] Processing SRX4528470. (2/3)
2021-08-12 15:45:43 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-12 15:46:13 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-12 15:46:43 [INFO] Processing SRX4553878. (3/3)
2021-08-12 15:46:43 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-12 15:47:15 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-12 15:47:49 [INFO] Writing to disk...
2021-08-12 15:48:06 [INFO] Finished.
2021-08-12 16:32:09 [INFO] Starting.
2021-08-12 16:32:09 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-12 16:32:09 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-12 16:32:09 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:32:10 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:32:10 [INFO] Writing every 10 Runs.
2021-08-12 16:32:10 [INFO] Processing SRX4605775. (1/3)
2021-08-12 16:32:10 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-12 16:32:39 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-12 16:33:10 [INFO] Processing SRX4528470. (2/3)
2021-08-12 16:33:10 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-12 16:33:42 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-12 16:34:17 [INFO] Processing SRX4553878. (3/3)
2021-08-12 16:34:17 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-12 16:34:53 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-12 16:35:32 [INFO] Writing to disk...
2021-08-12 16:35:57 [INFO] Finished.
2021-08-20 17:58:35 [INFO] Starting.
2021-08-20 17:58:35 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-20 17:58:35 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-20 17:58:35 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:58:36 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:58:36 [INFO] Writing every 10 Runs.
2021-08-20 17:58:36 [INFO] Processing SRX4605775. (1/3)
2021-08-20 17:58:36 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-20 17:58:57 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-20 17:59:20 [INFO] Processing SRX4528470. (2/3)
2021-08-20 17:59:20 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-20 17:59:37 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-20 17:59:53 [INFO] Processing SRX4553878. (3/3)
2021-08-20 17:59:53 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-20 18:00:49 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-20 18:02:14 [INFO] Writing to disk...
2021-08-20 18:02:33 [INFO] Finished.
2021-08-23 11:29:56 [INFO] Starting.
2021-08-23 11:29:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-23 11:29:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-23 11:29:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:29:57 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:29:57 [INFO] Writing every 10 Runs.
2021-08-23 11:29:57 [INFO] Processing SRX4605775. (1/3)
2021-08-23 11:29:57 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-23 11:30:10 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-23 11:30:24 [INFO] Processing SRX4528470. (2/3)
2021-08-23 11:30:24 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-23 11:30:32 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-23 11:30:43 [INFO] Processing SRX4553878. (3/3)
2021-08-23 11:30:43 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-23 11:30:58 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-23 11:31:14 [INFO] Writing to disk...
2021-08-23 11:31:16 [INFO] Finished.
2021-08-23 13:16:28 [INFO] Starting.
2021-08-23 13:16:28 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/
2021-08-23 13:16:28 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157048/aggregate.hdf5
2021-08-23 13:16:28 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:29 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:29 [INFO] Writing every 10 Runs.
2021-08-23 13:16:29 [INFO] Processing SRX4605775. (1/3)
2021-08-23 13:16:29 [INFO] Processing SRX4605775-SRR7749848. (1/6)
2021-08-23 13:16:37 [INFO] Processing SRX4605775-SRR7749847. (2/6)
2021-08-23 13:16:44 [INFO] Processing SRX4528470. (2/3)
2021-08-23 13:16:44 [INFO] Processing SRX4528470-SRR7667905. (3/6)
2021-08-23 13:16:50 [INFO] Processing SRX4528470-SRR7667904. (4/6)
2021-08-23 13:16:57 [INFO] Processing SRX4553878. (3/3)
2021-08-23 13:16:57 [INFO] Processing SRX4553878-SRR7695544. (5/6)
2021-08-23 13:17:03 [INFO] Processing SRX4553878-SRR7695545. (6/6)
2021-08-23 13:17:10 [INFO] Writing to disk...
2021-08-23 13:17:11 [INFO] Finished.