2021-06-10 04:05:10 [INFO] Starting.
2021-06-10 04:05:10 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-06-10 04:05:10 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-06-10 04:05:10 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:05:10 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:05:11 [INFO] Building aggregate.
2021-06-10 04:05:11 [INFO] Writing every 10 Runs.
2021-06-10 04:05:11 [INFO] Processing SRX4616053. (1/4)
2021-06-10 04:05:11 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-06-10 04:05:53 [INFO] Processing SRX4616054. (2/4)
2021-06-10 04:05:53 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-06-10 04:06:14 [INFO] Processing SRX4616055. (3/4)
2021-06-10 04:06:14 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-06-10 04:06:38 [INFO] Processing SRX4616052. (4/4)
2021-06-10 04:06:38 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-06-10 04:07:19 [INFO] Writing to disk...
2021-06-10 04:07:32 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX4616053. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-02 17:21:28 [INFO] Processing SRX4616054. (2/4)
2021-08-02 17:21:28 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-02 17:30:06 [INFO] Processing SRX4616055. (3/4)
2021-08-02 17:30:06 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-02 17:37:50 [INFO] Processing SRX4616052. (4/4)
2021-08-02 17:37:50 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-02 17:45:40 [INFO] Writing to disk...
2021-08-02 17:47:02 [INFO] Finished.
2021-08-12 14:32:30 [INFO] Starting.
2021-08-12 14:32:30 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-12 14:32:30 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-12 14:32:30 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:32:31 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:32:31 [INFO] Writing every 10 Runs.
2021-08-12 14:32:31 [INFO] Processing SRX4616053. (1/4)
2021-08-12 14:32:31 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-12 14:33:07 [INFO] Processing SRX4616054. (2/4)
2021-08-12 14:33:07 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-12 14:33:44 [INFO] Processing SRX4616055. (3/4)
2021-08-12 14:33:44 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-12 14:34:27 [INFO] Processing SRX4616052. (4/4)
2021-08-12 14:34:27 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-12 14:35:11 [INFO] Writing to disk...
2021-08-12 14:35:27 [INFO] Finished.
2021-08-12 15:10:56 [INFO] Starting.
2021-08-12 15:10:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-12 15:10:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-12 15:10:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:10:57 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:10:57 [INFO] Writing every 10 Runs.
2021-08-12 15:10:57 [INFO] Processing SRX4616053. (1/4)
2021-08-12 15:10:57 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-12 15:11:35 [INFO] Processing SRX4616054. (2/4)
2021-08-12 15:11:35 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-12 15:12:08 [INFO] Processing SRX4616055. (3/4)
2021-08-12 15:12:08 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-12 15:12:45 [INFO] Processing SRX4616052. (4/4)
2021-08-12 15:12:45 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-12 15:13:22 [INFO] Writing to disk...
2021-08-12 15:13:36 [INFO] Finished.
2021-08-12 15:45:45 [INFO] Starting.
2021-08-12 15:45:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-12 15:45:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-12 15:45:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:45:47 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:45:47 [INFO] Writing every 10 Runs.
2021-08-12 15:45:47 [INFO] Processing SRX4616053. (1/4)
2021-08-12 15:45:47 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-12 15:46:30 [INFO] Processing SRX4616054. (2/4)
2021-08-12 15:46:30 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-12 15:47:01 [INFO] Processing SRX4616055. (3/4)
2021-08-12 15:47:01 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-12 15:47:40 [INFO] Processing SRX4616052. (4/4)
2021-08-12 15:47:40 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-12 15:48:31 [INFO] Writing to disk...
2021-08-12 15:48:53 [INFO] Finished.
2021-08-12 16:34:07 [INFO] Starting.
2021-08-12 16:34:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-12 16:34:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-12 16:34:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:08 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:34:08 [INFO] Writing every 10 Runs.
2021-08-12 16:34:08 [INFO] Processing SRX4616053. (1/4)
2021-08-12 16:34:08 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-12 16:35:03 [INFO] Processing SRX4616054. (2/4)
2021-08-12 16:35:03 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-12 16:36:01 [INFO] Processing SRX4616055. (3/4)
2021-08-12 16:36:01 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-12 16:37:07 [INFO] Processing SRX4616052. (4/4)
2021-08-12 16:37:07 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-12 16:38:31 [INFO] Writing to disk...
2021-08-12 16:39:00 [INFO] Finished.
2021-08-20 17:59:52 [INFO] Starting.
2021-08-20 17:59:52 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-20 17:59:52 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-20 17:59:52 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:53 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:53 [INFO] Writing every 10 Runs.
2021-08-20 17:59:53 [INFO] Processing SRX4616053. (1/4)
2021-08-20 17:59:53 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-20 18:01:17 [INFO] Processing SRX4616054. (2/4)
2021-08-20 18:01:17 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-20 18:02:37 [INFO] Processing SRX4616055. (3/4)
2021-08-20 18:02:37 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-20 18:04:01 [INFO] Processing SRX4616052. (4/4)
2021-08-20 18:04:01 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-20 18:04:28 [INFO] Writing to disk...
2021-08-20 18:04:37 [INFO] Finished.
2021-08-23 11:30:37 [INFO] Starting.
2021-08-23 11:30:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-23 11:30:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-23 11:30:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:38 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:38 [INFO] Writing every 10 Runs.
2021-08-23 11:30:38 [INFO] Processing SRX4616053. (1/4)
2021-08-23 11:30:38 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-23 11:30:56 [INFO] Processing SRX4616054. (2/4)
2021-08-23 11:30:56 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-23 11:31:12 [INFO] Processing SRX4616055. (3/4)
2021-08-23 11:31:12 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-23 11:31:29 [INFO] Processing SRX4616052. (4/4)
2021-08-23 11:31:29 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-23 11:31:48 [INFO] Writing to disk...
2021-08-23 11:31:50 [INFO] Finished.
2021-08-23 13:17:00 [INFO] Starting.
2021-08-23 13:17:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/
2021-08-23 13:17:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP157894/aggregate.hdf5
2021-08-23 13:17:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:17:01 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:17:01 [INFO] Writing every 10 Runs.
2021-08-23 13:17:01 [INFO] Processing SRX4616053. (1/4)
2021-08-23 13:17:01 [INFO] Processing SRX4616053-SRR7760385. (1/4)
2021-08-23 13:17:08 [INFO] Processing SRX4616054. (2/4)
2021-08-23 13:17:08 [INFO] Processing SRX4616054-SRR7760386. (2/4)
2021-08-23 13:17:14 [INFO] Processing SRX4616055. (3/4)
2021-08-23 13:17:14 [INFO] Processing SRX4616055-SRR7760387. (3/4)
2021-08-23 13:17:23 [INFO] Processing SRX4616052. (4/4)
2021-08-23 13:17:23 [INFO] Processing SRX4616052-SRR7760384. (4/4)
2021-08-23 13:17:31 [INFO] Writing to disk...
2021-08-23 13:17:32 [INFO] Finished.