2021-06-10 03:28:39 [INFO] Starting.
2021-06-10 03:28:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-06-10 03:28:39 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-06-10 03:28:39 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:28:39 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:28:40 [INFO] Building aggregate.
2021-06-10 03:28:40 [INFO] Writing every 10 Runs.
2021-06-10 03:28:40 [INFO] Processing SRX4564980. (1/9)
2021-06-10 03:28:40 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-06-10 03:29:00 [INFO] Processing SRX4564981. (2/9)
2021-06-10 03:29:00 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-06-10 03:29:25 [INFO] Processing SRX4564985. (3/9)
2021-06-10 03:29:25 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-06-10 03:29:48 [INFO] Processing SRX4564982. (4/9)
2021-06-10 03:29:48 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-06-10 03:30:18 [INFO] Processing SRX4564986. (5/9)
2021-06-10 03:30:18 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-06-10 03:30:33 [INFO] Processing SRX4564983. (6/9)
2021-06-10 03:30:33 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-06-10 03:30:48 [INFO] Processing SRX4564987. (7/9)
2021-06-10 03:30:48 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-06-10 03:31:01 [INFO] Processing SRX4564988. (8/9)
2021-06-10 03:31:01 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-06-10 03:31:27 [INFO] Processing SRX4564984. (9/9)
2021-06-10 03:31:27 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-06-10 03:31:45 [INFO] Writing to disk...
2021-06-10 03:31:58 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX4564980. (1/9)
2021-08-02 17:08:56 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-04 22:05:52 [INFO] Starting.
2021-08-04 22:05:52 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-04 22:05:52 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-04 22:05:52 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:05:53 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:05:53 [INFO] Writing every 10 Runs.
2021-08-04 22:05:53 [INFO] Processing SRX4564980. (1/9)
2021-08-04 22:05:53 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-04 22:09:17 [INFO] Processing SRX4564981. (2/9)
2021-08-04 22:09:17 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-04 22:17:10 [INFO] Processing SRX4564985. (3/9)
2021-08-04 22:17:10 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-04 22:25:24 [INFO] Processing SRX4564982. (4/9)
2021-08-04 22:25:24 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-04 22:32:56 [INFO] Processing SRX4564986. (5/9)
2021-08-04 22:32:56 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-04 22:40:17 [INFO] Processing SRX4564983. (6/9)
2021-08-04 22:40:17 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-04 22:47:29 [INFO] Processing SRX4564987. (7/9)
2021-08-04 22:47:29 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-04 22:54:48 [INFO] Processing SRX4564988. (8/9)
2021-08-04 22:54:48 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-04 23:01:59 [INFO] Processing SRX4564984. (9/9)
2021-08-04 23:01:59 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-04 23:09:34 [INFO] Writing to disk...
2021-08-04 23:10:49 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX4564980. (1/9)
2021-08-12 14:31:18 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-12 14:31:31 [INFO] Processing SRX4564981. (2/9)
2021-08-12 14:31:31 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-12 14:32:05 [INFO] Processing SRX4564985. (3/9)
2021-08-12 14:32:05 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-12 14:32:40 [INFO] Processing SRX4564982. (4/9)
2021-08-12 14:32:40 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-12 14:33:12 [INFO] Processing SRX4564986. (5/9)
2021-08-12 14:33:12 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-12 14:33:34 [INFO] Processing SRX4564983. (6/9)
2021-08-12 14:33:34 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-12 14:33:57 [INFO] Processing SRX4564987. (7/9)
2021-08-12 14:33:57 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-12 14:34:18 [INFO] Processing SRX4564988. (8/9)
2021-08-12 14:34:18 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-12 14:34:39 [INFO] Processing SRX4564984. (9/9)
2021-08-12 14:34:39 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-12 14:35:03 [INFO] Writing to disk...
2021-08-12 14:35:19 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX4564980. (1/9)
2021-08-12 15:09:40 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-12 15:09:51 [INFO] Processing SRX4564981. (2/9)
2021-08-12 15:09:51 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-12 15:10:15 [INFO] Processing SRX4564985. (3/9)
2021-08-12 15:10:15 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-12 15:10:43 [INFO] Processing SRX4564982. (4/9)
2021-08-12 15:10:43 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-12 15:11:07 [INFO] Processing SRX4564986. (5/9)
2021-08-12 15:11:07 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-12 15:11:25 [INFO] Processing SRX4564983. (6/9)
2021-08-12 15:11:25 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-12 15:11:43 [INFO] Processing SRX4564987. (7/9)
2021-08-12 15:11:43 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-12 15:12:02 [INFO] Processing SRX4564988. (8/9)
2021-08-12 15:12:02 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-12 15:12:23 [INFO] Processing SRX4564984. (9/9)
2021-08-12 15:12:23 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-12 15:12:47 [INFO] Writing to disk...
2021-08-12 15:13:00 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX4564980. (1/9)
2021-08-12 15:44:40 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-12 15:44:55 [INFO] Processing SRX4564981. (2/9)
2021-08-12 15:44:55 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-12 15:45:26 [INFO] Processing SRX4564985. (3/9)
2021-08-12 15:45:26 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-12 15:46:04 [INFO] Processing SRX4564982. (4/9)
2021-08-12 15:46:04 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-12 15:46:33 [INFO] Processing SRX4564986. (5/9)
2021-08-12 15:46:33 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-12 15:46:52 [INFO] Processing SRX4564983. (6/9)
2021-08-12 15:46:52 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-12 15:47:12 [INFO] Processing SRX4564987. (7/9)
2021-08-12 15:47:12 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-12 15:47:32 [INFO] Processing SRX4564988. (8/9)
2021-08-12 15:47:32 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-12 15:47:52 [INFO] Processing SRX4564984. (9/9)
2021-08-12 15:47:52 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-12 15:48:18 [INFO] Writing to disk...
2021-08-12 15:48:34 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX4564980. (1/9)
2021-08-12 16:31:35 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-12 16:31:50 [INFO] Processing SRX4564981. (2/9)
2021-08-12 16:31:50 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-12 16:32:24 [INFO] Processing SRX4564985. (3/9)
2021-08-12 16:32:24 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-12 16:32:59 [INFO] Processing SRX4564982. (4/9)
2021-08-12 16:32:59 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-12 16:33:29 [INFO] Processing SRX4564986. (5/9)
2021-08-12 16:33:29 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-12 16:33:55 [INFO] Processing SRX4564983. (6/9)
2021-08-12 16:33:55 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-12 16:34:17 [INFO] Processing SRX4564987. (7/9)
2021-08-12 16:34:17 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-12 16:34:42 [INFO] Processing SRX4564988. (8/9)
2021-08-12 16:34:42 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-12 16:35:07 [INFO] Processing SRX4564984. (9/9)
2021-08-12 16:35:07 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-12 16:35:40 [INFO] Writing to disk...
2021-08-12 16:36:04 [INFO] Finished.
2021-08-20 17:55:31 [INFO] Starting.
2021-08-20 17:55:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-20 17:55:31 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-20 17:55:31 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:55:33 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:55:33 [INFO] Writing every 10 Runs.
2021-08-20 17:55:33 [INFO] Processing SRX4564980. (1/9)
2021-08-20 17:55:33 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-20 17:55:41 [INFO] Processing SRX4564981. (2/9)
2021-08-20 17:55:41 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-20 17:56:05 [INFO] Processing SRX4564985. (3/9)
2021-08-20 17:56:05 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-20 17:56:32 [INFO] Processing SRX4564982. (4/9)
2021-08-20 17:56:32 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-20 17:56:57 [INFO] Processing SRX4564986. (5/9)
2021-08-20 17:56:57 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-20 17:57:11 [INFO] Processing SRX4564983. (6/9)
2021-08-20 17:57:11 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-20 17:57:25 [INFO] Processing SRX4564987. (7/9)
2021-08-20 17:57:25 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-20 17:57:38 [INFO] Processing SRX4564988. (8/9)
2021-08-20 17:57:38 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-20 17:57:52 [INFO] Processing SRX4564984. (9/9)
2021-08-20 17:57:52 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-20 17:58:14 [INFO] Writing to disk...
2021-08-20 17:58:24 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX4564980. (1/9)
2021-08-23 11:28:01 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-23 11:28:07 [INFO] Processing SRX4564981. (2/9)
2021-08-23 11:28:07 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-23 11:28:19 [INFO] Processing SRX4564985. (3/9)
2021-08-23 11:28:19 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-23 11:28:33 [INFO] Processing SRX4564982. (4/9)
2021-08-23 11:28:33 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-23 11:28:46 [INFO] Processing SRX4564986. (5/9)
2021-08-23 11:28:46 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-23 11:28:53 [INFO] Processing SRX4564983. (6/9)
2021-08-23 11:28:53 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-23 11:29:01 [INFO] Processing SRX4564987. (7/9)
2021-08-23 11:29:01 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-23 11:29:10 [INFO] Processing SRX4564988. (8/9)
2021-08-23 11:29:10 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-23 11:29:19 [INFO] Processing SRX4564984. (9/9)
2021-08-23 11:29:19 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-23 11:29:30 [INFO] Writing to disk...
2021-08-23 11:29:32 [INFO] Finished.
2021-08-23 13:15:16 [INFO] Starting.
2021-08-23 13:15:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/
2021-08-23 13:15:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP158276/aggregate.hdf5
2021-08-23 13:15:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:16 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:16 [INFO] Writing every 10 Runs.
2021-08-23 13:15:16 [INFO] Processing SRX4564980. (1/9)
2021-08-23 13:15:16 [INFO] Processing SRX4564980-SRR7707707. (1/9)
2021-08-23 13:15:22 [INFO] Processing SRX4564981. (2/9)
2021-08-23 13:15:22 [INFO] Processing SRX4564981-SRR7707708. (2/9)
2021-08-23 13:15:30 [INFO] Processing SRX4564985. (3/9)
2021-08-23 13:15:30 [INFO] Processing SRX4564985-SRR7707712. (3/9)
2021-08-23 13:15:36 [INFO] Processing SRX4564982. (4/9)
2021-08-23 13:15:36 [INFO] Processing SRX4564982-SRR7707709. (4/9)
2021-08-23 13:15:43 [INFO] Processing SRX4564986. (5/9)
2021-08-23 13:15:43 [INFO] Processing SRX4564986-SRR7707713. (5/9)
2021-08-23 13:15:49 [INFO] Processing SRX4564983. (6/9)
2021-08-23 13:15:49 [INFO] Processing SRX4564983-SRR7707710. (6/9)
2021-08-23 13:15:54 [INFO] Processing SRX4564987. (7/9)
2021-08-23 13:15:54 [INFO] Processing SRX4564987-SRR7707714. (7/9)
2021-08-23 13:16:00 [INFO] Processing SRX4564988. (8/9)
2021-08-23 13:16:00 [INFO] Processing SRX4564988-SRR7707715. (8/9)
2021-08-23 13:16:07 [INFO] Processing SRX4564984. (9/9)
2021-08-23 13:16:07 [INFO] Processing SRX4564984-SRR7707711. (9/9)
2021-08-23 13:16:13 [INFO] Writing to disk...
2021-08-23 13:16:13 [INFO] Finished.