2021-06-10 04:00:16 [INFO] Starting.
2021-06-10 04:00:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-06-10 04:00:16 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-06-10 04:00:16 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:00:16 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:00:17 [INFO] Building aggregate.
2021-06-10 04:00:17 [INFO] Writing every 10 Runs.
2021-06-10 04:00:17 [INFO] Processing SRX4704635. (1/5)
2021-06-10 04:00:17 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-06-10 04:00:31 [INFO] Processing SRX4704634. (2/5)
2021-06-10 04:00:31 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-06-10 04:00:41 [INFO] Processing SRX4704632. (3/5)
2021-06-10 04:00:41 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-06-10 04:01:05 [INFO] Processing SRX4704633. (4/5)
2021-06-10 04:01:05 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-06-10 04:01:18 [INFO] Processing SRX4704636. (5/5)
2021-06-10 04:01:18 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-06-10 04:01:38 [INFO] Writing to disk...
2021-06-10 04:01:45 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX4704635. (1/5)
2021-08-02 17:08:56 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-02 17:48:41 [INFO] Processing SRX4704634. (2/5)
2021-08-02 17:48:41 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-02 17:59:26 [INFO] Processing SRX4704632. (3/5)
2021-08-02 17:59:26 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-02 18:07:59 [INFO] Processing SRX4704633. (4/5)
2021-08-02 18:07:59 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-02 18:14:59 [INFO] Processing SRX4704636. (5/5)
2021-08-02 18:14:59 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-02 18:22:26 [INFO] Writing to disk...
2021-08-02 18:23:28 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX4704635. (1/5)
2021-08-12 14:31:18 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-12 14:31:41 [INFO] Processing SRX4704634. (2/5)
2021-08-12 14:31:41 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-12 14:31:56 [INFO] Processing SRX4704632. (3/5)
2021-08-12 14:31:56 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-12 14:32:15 [INFO] Processing SRX4704633. (4/5)
2021-08-12 14:32:15 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-12 14:32:31 [INFO] Processing SRX4704636. (5/5)
2021-08-12 14:32:31 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-12 14:33:01 [INFO] Writing to disk...
2021-08-12 14:33:09 [INFO] Finished.
2021-08-12 15:09:44 [INFO] Starting.
2021-08-12 15:09:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-12 15:09:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-12 15:09:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:46 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:46 [INFO] Writing every 10 Runs.
2021-08-12 15:09:46 [INFO] Processing SRX4704635. (1/5)
2021-08-12 15:09:46 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-12 15:10:03 [INFO] Processing SRX4704634. (2/5)
2021-08-12 15:10:03 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-12 15:10:20 [INFO] Processing SRX4704632. (3/5)
2021-08-12 15:10:20 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-12 15:10:38 [INFO] Processing SRX4704633. (4/5)
2021-08-12 15:10:38 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-12 15:10:51 [INFO] Processing SRX4704636. (5/5)
2021-08-12 15:10:51 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-12 15:11:16 [INFO] Writing to disk...
2021-08-12 15:11:24 [INFO] Finished.
2021-08-12 15:44:38 [INFO] Starting.
2021-08-12 15:44:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-12 15:44:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-12 15:44:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:39 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:39 [INFO] Writing every 10 Runs.
2021-08-12 15:44:39 [INFO] Processing SRX4704635. (1/5)
2021-08-12 15:44:39 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-12 15:44:58 [INFO] Processing SRX4704634. (2/5)
2021-08-12 15:44:58 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-12 15:45:13 [INFO] Processing SRX4704632. (3/5)
2021-08-12 15:45:13 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-12 15:45:35 [INFO] Processing SRX4704633. (4/5)
2021-08-12 15:45:35 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-12 15:45:50 [INFO] Processing SRX4704636. (5/5)
2021-08-12 15:45:50 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-12 15:46:17 [INFO] Writing to disk...
2021-08-12 15:46:26 [INFO] Finished.
2021-08-12 16:33:03 [INFO] Starting.
2021-08-12 16:33:03 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-12 16:33:03 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-12 16:33:03 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:33:04 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:33:04 [INFO] Writing every 10 Runs.
2021-08-12 16:33:04 [INFO] Processing SRX4704635. (1/5)
2021-08-12 16:33:04 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-12 16:33:24 [INFO] Processing SRX4704634. (2/5)
2021-08-12 16:33:24 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-12 16:33:43 [INFO] Processing SRX4704632. (3/5)
2021-08-12 16:33:43 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-12 16:34:05 [INFO] Processing SRX4704633. (4/5)
2021-08-12 16:34:05 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-12 16:34:25 [INFO] Processing SRX4704636. (5/5)
2021-08-12 16:34:25 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-12 16:35:03 [INFO] Writing to disk...
2021-08-12 16:35:16 [INFO] Finished.
2021-08-20 17:59:07 [INFO] Starting.
2021-08-20 17:59:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-20 17:59:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-20 17:59:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:09 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:09 [INFO] Writing every 10 Runs.
2021-08-20 17:59:09 [INFO] Processing SRX4704635. (1/5)
2021-08-20 17:59:09 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-20 17:59:24 [INFO] Processing SRX4704634. (2/5)
2021-08-20 17:59:24 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-20 17:59:36 [INFO] Processing SRX4704632. (3/5)
2021-08-20 17:59:36 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-20 17:59:49 [INFO] Processing SRX4704633. (4/5)
2021-08-20 17:59:49 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-20 18:00:08 [INFO] Processing SRX4704636. (5/5)
2021-08-20 18:00:08 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-20 18:01:32 [INFO] Writing to disk...
2021-08-20 18:01:49 [INFO] Finished.
2021-08-23 11:30:20 [INFO] Starting.
2021-08-23 11:30:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-23 11:30:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-23 11:30:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:21 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:21 [INFO] Writing every 10 Runs.
2021-08-23 11:30:21 [INFO] Processing SRX4704635. (1/5)
2021-08-23 11:30:21 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-23 11:30:32 [INFO] Processing SRX4704634. (2/5)
2021-08-23 11:30:32 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-23 11:30:42 [INFO] Processing SRX4704632. (3/5)
2021-08-23 11:30:42 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-23 11:30:51 [INFO] Processing SRX4704633. (4/5)
2021-08-23 11:30:51 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-23 11:31:00 [INFO] Processing SRX4704636. (5/5)
2021-08-23 11:31:00 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-23 11:31:13 [INFO] Writing to disk...
2021-08-23 11:31:14 [INFO] Finished.
2021-08-23 13:16:50 [INFO] Starting.
2021-08-23 13:16:50 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/
2021-08-23 13:16:50 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP162056/aggregate.hdf5
2021-08-23 13:16:50 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:50 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:50 [INFO] Writing every 10 Runs.
2021-08-23 13:16:50 [INFO] Processing SRX4704635. (1/5)
2021-08-23 13:16:50 [INFO] Processing SRX4704635-SRR7853974. (1/5)
2021-08-23 13:16:57 [INFO] Processing SRX4704634. (2/5)
2021-08-23 13:16:57 [INFO] Processing SRX4704634-SRR7853973. (2/5)
2021-08-23 13:17:02 [INFO] Processing SRX4704632. (3/5)
2021-08-23 13:17:02 [INFO] Processing SRX4704632-SRR7853971. (3/5)
2021-08-23 13:17:08 [INFO] Processing SRX4704633. (4/5)
2021-08-23 13:17:08 [INFO] Processing SRX4704633-SRR7853972. (4/5)
2021-08-23 13:17:14 [INFO] Processing SRX4704636. (5/5)
2021-08-23 13:17:14 [INFO] Processing SRX4704636-SRR7853975. (5/5)
2021-08-23 13:17:23 [INFO] Writing to disk...
2021-08-23 13:17:23 [INFO] Finished.