2021-06-10 02:23:17 [INFO] Starting.
2021-06-10 02:23:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-06-10 02:23:17 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-06-10 02:23:17 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 02:23:17 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 02:23:18 [INFO] Building aggregate.
2021-06-10 02:23:18 [INFO] Writing every 10 Runs.
2021-06-10 02:23:18 [INFO] Processing SRX6384764. (1/20)
2021-06-10 02:23:18 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-06-10 02:24:00 [INFO] Processing SRX6384759. (2/20)
2021-06-10 02:24:00 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-06-10 02:24:36 [INFO] Processing SRX6384773. (3/20)
2021-06-10 02:24:36 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-06-10 02:25:28 [INFO] Processing SRX6384770. (4/20)
2021-06-10 02:25:28 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-06-10 02:26:54 [INFO] Processing SRX6384772. (5/20)
2021-06-10 02:26:54 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-06-10 02:27:47 [INFO] Processing SRX6384778. (6/20)
2021-06-10 02:27:47 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-06-10 02:28:40 [INFO] Processing SRX6384777. (7/20)
2021-06-10 02:28:40 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-06-10 02:29:17 [INFO] Processing SRX6384761. (8/20)
2021-06-10 02:29:17 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-06-10 02:30:12 [INFO] Processing SRX6384771. (9/20)
2021-06-10 02:30:12 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-06-10 02:30:45 [INFO] Processing SRX6384774. (10/20)
2021-06-10 02:30:45 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-06-10 02:31:28 [INFO] Writing to disk...
2021-06-10 02:31:54 [INFO] Processing SRX6384765. (11/20)
2021-06-10 02:31:54 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-06-10 02:32:46 [INFO] Processing SRX6384766. (12/20)
2021-06-10 02:32:46 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-06-10 02:33:56 [INFO] Processing SRX6384767. (13/20)
2021-06-10 02:33:56 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-06-10 02:35:10 [INFO] Processing SRX6384769. (14/20)
2021-06-10 02:35:10 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-06-10 02:36:26 [INFO] Processing SRX6384768. (15/20)
2021-06-10 02:36:26 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-06-10 02:37:06 [INFO] Processing SRX6384763. (16/20)
2021-06-10 02:37:06 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-06-10 02:38:07 [INFO] Processing SRX6384775. (17/20)
2021-06-10 02:38:07 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-06-10 02:39:10 [INFO] Processing SRX6384762. (18/20)
2021-06-10 02:39:10 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-06-10 02:40:11 [INFO] Processing SRX6384760. (19/20)
2021-06-10 02:40:11 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-06-10 02:41:12 [INFO] Processing SRX6384776. (20/20)
2021-06-10 02:41:12 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-06-10 02:42:10 [INFO] Writing to disk...
2021-06-10 02:42:57 [INFO] Finished.
2021-08-06 12:19:00 [INFO] SPECIAL NOTE: 1bp_raw aggregate build failed due to memory issues. It was manually copied in from a version that Ruchi calculated separately.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX6384764. (1/20)
2021-08-12 14:31:18 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-12 14:32:04 [INFO] Processing SRX6384759. (2/20)
2021-08-12 14:32:04 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-12 14:32:45 [INFO] Processing SRX6384773. (3/20)
2021-08-12 14:32:45 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-12 14:33:27 [INFO] Processing SRX6384770. (4/20)
2021-08-12 14:33:27 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-12 14:34:34 [INFO] Processing SRX6384772. (5/20)
2021-08-12 14:34:34 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-12 14:35:14 [INFO] Processing SRX6384778. (6/20)
2021-08-12 14:35:14 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-12 14:36:01 [INFO] Processing SRX6384777. (7/20)
2021-08-12 14:36:01 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-12 14:36:41 [INFO] Processing SRX6384761. (8/20)
2021-08-12 14:36:41 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-12 14:37:24 [INFO] Processing SRX6384771. (9/20)
2021-08-12 14:37:24 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-12 14:37:58 [INFO] Processing SRX6384774. (10/20)
2021-08-12 14:37:58 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-12 14:38:33 [INFO] Writing to disk...
2021-08-12 14:38:56 [INFO] Processing SRX6384765. (11/20)
2021-08-12 14:38:56 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-12 14:39:39 [INFO] Processing SRX6384766. (12/20)
2021-08-12 14:39:39 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-12 14:40:23 [INFO] Processing SRX6384767. (13/20)
2021-08-12 14:40:23 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-12 14:41:11 [INFO] Processing SRX6384769. (14/20)
2021-08-12 14:41:11 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-12 14:42:04 [INFO] Processing SRX6384768. (15/20)
2021-08-12 14:42:04 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-12 14:42:47 [INFO] Processing SRX6384763. (16/20)
2021-08-12 14:42:47 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-12 14:43:37 [INFO] Processing SRX6384775. (17/20)
2021-08-12 14:43:37 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-12 14:44:18 [INFO] Processing SRX6384762. (18/20)
2021-08-12 14:44:18 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-12 14:44:48 [INFO] Processing SRX6384760. (19/20)
2021-08-12 14:44:48 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-12 14:45:25 [INFO] Processing SRX6384776. (20/20)
2021-08-12 14:45:25 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-12 14:46:01 [INFO] Writing to disk...
2021-08-12 14:46:30 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX6384764. (1/20)
2021-08-12 15:09:40 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-12 15:10:22 [INFO] Processing SRX6384759. (2/20)
2021-08-12 15:10:22 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-12 15:10:53 [INFO] Processing SRX6384773. (3/20)
2021-08-12 15:10:53 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-12 15:11:37 [INFO] Processing SRX6384770. (4/20)
2021-08-12 15:11:37 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-12 15:12:38 [INFO] Processing SRX6384772. (5/20)
2021-08-12 15:12:38 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-12 15:13:13 [INFO] Processing SRX6384778. (6/20)
2021-08-12 15:13:13 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-12 15:13:57 [INFO] Processing SRX6384777. (7/20)
2021-08-12 15:13:57 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-12 15:14:33 [INFO] Processing SRX6384761. (8/20)
2021-08-12 15:14:33 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-12 15:15:21 [INFO] Processing SRX6384771. (9/20)
2021-08-12 15:15:21 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-12 15:15:46 [INFO] Processing SRX6384774. (10/20)
2021-08-12 15:15:46 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-12 15:16:20 [INFO] Writing to disk...
2021-08-12 15:16:41 [INFO] Processing SRX6384765. (11/20)
2021-08-12 15:16:41 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-12 15:17:20 [INFO] Processing SRX6384766. (12/20)
2021-08-12 15:17:20 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-12 15:17:58 [INFO] Processing SRX6384767. (13/20)
2021-08-12 15:17:58 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-12 15:18:41 [INFO] Processing SRX6384769. (14/20)
2021-08-12 15:18:41 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-12 15:19:33 [INFO] Processing SRX6384768. (15/20)
2021-08-12 15:19:33 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-12 15:20:07 [INFO] Processing SRX6384763. (16/20)
2021-08-12 15:20:07 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-12 15:20:51 [INFO] Processing SRX6384775. (17/20)
2021-08-12 15:20:51 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-12 15:21:32 [INFO] Processing SRX6384762. (18/20)
2021-08-12 15:21:32 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-12 15:22:07 [INFO] Processing SRX6384760. (19/20)
2021-08-12 15:22:07 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-12 15:22:35 [INFO] Processing SRX6384776. (20/20)
2021-08-12 15:22:35 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-12 15:23:15 [INFO] Writing to disk...
2021-08-12 15:23:49 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:39 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:39 [INFO] Writing every 10 Runs.
2021-08-12 15:44:39 [INFO] Processing SRX6384764. (1/20)
2021-08-12 15:44:39 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-12 15:45:24 [INFO] Processing SRX6384759. (2/20)
2021-08-12 15:45:24 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-12 15:46:01 [INFO] Processing SRX6384773. (3/20)
2021-08-12 15:46:01 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-12 15:46:45 [INFO] Processing SRX6384770. (4/20)
2021-08-12 15:46:45 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-12 15:47:45 [INFO] Processing SRX6384772. (5/20)
2021-08-12 15:47:45 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-12 15:48:36 [INFO] Processing SRX6384778. (6/20)
2021-08-12 15:48:36 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-12 15:49:24 [INFO] Processing SRX6384777. (7/20)
2021-08-12 15:49:24 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-12 15:50:08 [INFO] Processing SRX6384761. (8/20)
2021-08-12 15:50:08 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-12 15:50:49 [INFO] Processing SRX6384771. (9/20)
2021-08-12 15:50:49 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-12 15:51:24 [INFO] Processing SRX6384774. (10/20)
2021-08-12 15:51:24 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-12 15:52:02 [INFO] Writing to disk...
2021-08-12 15:52:32 [INFO] Processing SRX6384765. (11/20)
2021-08-12 15:52:32 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-12 15:53:17 [INFO] Processing SRX6384766. (12/20)
2021-08-12 15:53:17 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-12 15:54:12 [INFO] Processing SRX6384767. (13/20)
2021-08-12 15:54:12 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-12 15:54:55 [INFO] Processing SRX6384769. (14/20)
2021-08-12 15:54:55 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-12 15:55:48 [INFO] Processing SRX6384768. (15/20)
2021-08-12 15:55:48 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-12 15:56:29 [INFO] Processing SRX6384763. (16/20)
2021-08-12 15:56:29 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-12 15:57:27 [INFO] Processing SRX6384775. (17/20)
2021-08-12 15:57:27 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-12 15:58:09 [INFO] Processing SRX6384762. (18/20)
2021-08-12 15:58:09 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-12 15:58:48 [INFO] Processing SRX6384760. (19/20)
2021-08-12 15:58:48 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-12 15:59:27 [INFO] Processing SRX6384776. (20/20)
2021-08-12 15:59:27 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-12 16:00:12 [INFO] Writing to disk...
2021-08-12 16:01:02 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX6384764. (1/20)
2021-08-12 16:31:35 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-12 16:32:34 [INFO] Processing SRX6384759. (2/20)
2021-08-12 16:32:34 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-12 16:33:23 [INFO] Processing SRX6384773. (3/20)
2021-08-12 16:33:23 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-12 16:34:18 [INFO] Processing SRX6384770. (4/20)
2021-08-12 16:34:18 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-12 16:35:58 [INFO] Processing SRX6384772. (5/20)
2021-08-12 16:35:58 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-12 16:37:03 [INFO] Processing SRX6384778. (6/20)
2021-08-12 16:37:03 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-12 16:38:15 [INFO] Processing SRX6384777. (7/20)
2021-08-12 16:38:15 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-12 16:39:18 [INFO] Processing SRX6384761. (8/20)
2021-08-12 16:39:18 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-12 16:40:28 [INFO] Processing SRX6384771. (9/20)
2021-08-12 16:40:28 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-12 16:41:32 [INFO] Processing SRX6384774. (10/20)
2021-08-12 16:41:32 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-12 16:42:31 [INFO] Writing to disk...
2021-08-12 16:43:17 [INFO] Processing SRX6384765. (11/20)
2021-08-12 16:43:17 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-12 16:44:18 [INFO] Processing SRX6384766. (12/20)
2021-08-12 16:44:18 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-12 16:45:26 [INFO] Processing SRX6384767. (13/20)
2021-08-12 16:45:26 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-12 16:46:38 [INFO] Processing SRX6384769. (14/20)
2021-08-12 16:46:38 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-12 16:48:08 [INFO] Processing SRX6384768. (15/20)
2021-08-12 16:48:08 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-12 16:49:21 [INFO] Processing SRX6384763. (16/20)
2021-08-12 16:49:21 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-12 16:51:02 [INFO] Processing SRX6384775. (17/20)
2021-08-12 16:51:02 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-12 16:52:31 [INFO] Processing SRX6384762. (18/20)
2021-08-12 16:52:31 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-12 16:53:50 [INFO] Processing SRX6384760. (19/20)
2021-08-12 16:53:50 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-12 16:54:57 [INFO] Processing SRX6384776. (20/20)
2021-08-12 16:54:57 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-12 16:56:05 [INFO] Writing to disk...
2021-08-12 16:57:28 [INFO] Finished.
2021-08-20 17:38:26 [INFO] Starting.
2021-08-20 17:38:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-20 17:38:26 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-20 17:38:26 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:38:27 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:38:27 [INFO] Writing every 10 Runs.
2021-08-20 17:38:27 [INFO] Processing SRX6384764. (1/20)
2021-08-20 17:38:27 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-20 17:39:04 [INFO] Processing SRX6384759. (2/20)
2021-08-20 17:39:04 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-20 17:39:36 [INFO] Processing SRX6384773. (3/20)
2021-08-20 17:39:36 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-20 17:40:13 [INFO] Processing SRX6384770. (4/20)
2021-08-20 17:40:13 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-20 17:41:03 [INFO] Processing SRX6384772. (5/20)
2021-08-20 17:41:03 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-20 17:41:35 [INFO] Processing SRX6384778. (6/20)
2021-08-20 17:41:35 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-20 17:42:07 [INFO] Processing SRX6384777. (7/20)
2021-08-20 17:42:07 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-20 17:42:36 [INFO] Processing SRX6384761. (8/20)
2021-08-20 17:42:36 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-20 17:43:09 [INFO] Processing SRX6384771. (9/20)
2021-08-20 17:43:09 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-20 17:43:34 [INFO] Processing SRX6384774. (10/20)
2021-08-20 17:43:34 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-20 17:44:01 [INFO] Writing to disk...
2021-08-20 17:44:15 [INFO] Processing SRX6384765. (11/20)
2021-08-20 17:44:15 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-20 17:44:51 [INFO] Processing SRX6384766. (12/20)
2021-08-20 17:44:51 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-20 17:45:25 [INFO] Processing SRX6384767. (13/20)
2021-08-20 17:45:25 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-20 17:46:04 [INFO] Processing SRX6384769. (14/20)
2021-08-20 17:46:04 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-20 17:46:51 [INFO] Processing SRX6384768. (15/20)
2021-08-20 17:46:51 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-20 17:47:28 [INFO] Processing SRX6384763. (16/20)
2021-08-20 17:47:28 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-20 17:48:07 [INFO] Processing SRX6384775. (17/20)
2021-08-20 17:48:07 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-20 17:48:42 [INFO] Processing SRX6384762. (18/20)
2021-08-20 17:48:42 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-20 17:49:16 [INFO] Processing SRX6384760. (19/20)
2021-08-20 17:49:16 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-20 17:49:47 [INFO] Processing SRX6384776. (20/20)
2021-08-20 17:49:47 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-20 17:50:20 [INFO] Writing to disk...
2021-08-20 17:50:43 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX6384764. (1/20)
2021-08-23 11:28:01 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-23 11:28:15 [INFO] Processing SRX6384759. (2/20)
2021-08-23 11:28:15 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-23 11:28:33 [INFO] Processing SRX6384773. (3/20)
2021-08-23 11:28:33 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-23 11:28:49 [INFO] Processing SRX6384770. (4/20)
2021-08-23 11:28:49 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-23 11:29:05 [INFO] Processing SRX6384772. (5/20)
2021-08-23 11:29:05 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-23 11:29:22 [INFO] Processing SRX6384778. (6/20)
2021-08-23 11:29:22 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-23 11:29:37 [INFO] Processing SRX6384777. (7/20)
2021-08-23 11:29:37 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-23 11:29:52 [INFO] Processing SRX6384761. (8/20)
2021-08-23 11:29:52 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-23 11:30:08 [INFO] Processing SRX6384771. (9/20)
2021-08-23 11:30:08 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-23 11:30:22 [INFO] Processing SRX6384774. (10/20)
2021-08-23 11:30:22 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-23 11:30:37 [INFO] Writing to disk...
2021-08-23 11:30:39 [INFO] Processing SRX6384765. (11/20)
2021-08-23 11:30:39 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-23 11:30:59 [INFO] Processing SRX6384766. (12/20)
2021-08-23 11:30:59 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-23 11:31:17 [INFO] Processing SRX6384767. (13/20)
2021-08-23 11:31:17 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-23 11:31:33 [INFO] Processing SRX6384769. (14/20)
2021-08-23 11:31:33 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-23 11:31:52 [INFO] Processing SRX6384768. (15/20)
2021-08-23 11:31:52 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-23 11:32:08 [INFO] Processing SRX6384763. (16/20)
2021-08-23 11:32:08 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-23 11:32:24 [INFO] Processing SRX6384775. (17/20)
2021-08-23 11:32:24 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-23 11:32:41 [INFO] Processing SRX6384762. (18/20)
2021-08-23 11:32:41 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-23 11:32:55 [INFO] Processing SRX6384760. (19/20)
2021-08-23 11:32:55 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-23 11:33:10 [INFO] Processing SRX6384776. (20/20)
2021-08-23 11:33:10 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-23 11:33:23 [INFO] Writing to disk...
2021-08-23 11:33:35 [INFO] Finished.
2021-08-23 13:15:16 [INFO] Starting.
2021-08-23 13:15:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/
2021-08-23 13:15:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP165933/aggregate.hdf5
2021-08-23 13:15:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:17 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:17 [INFO] Writing every 10 Runs.
2021-08-23 13:15:17 [INFO] Processing SRX6384764. (1/20)
2021-08-23 13:15:17 [INFO] Processing SRX6384764-SRR9621904. (1/20)
2021-08-23 13:15:24 [INFO] Processing SRX6384759. (2/20)
2021-08-23 13:15:24 [INFO] Processing SRX6384759-SRR9621899. (2/20)
2021-08-23 13:15:31 [INFO] Processing SRX6384773. (3/20)
2021-08-23 13:15:31 [INFO] Processing SRX6384773-SRR9621913. (3/20)
2021-08-23 13:15:38 [INFO] Processing SRX6384770. (4/20)
2021-08-23 13:15:38 [INFO] Processing SRX6384770-SRR9621910. (4/20)
2021-08-23 13:15:46 [INFO] Processing SRX6384772. (5/20)
2021-08-23 13:15:46 [INFO] Processing SRX6384772-SRR9621912. (5/20)
2021-08-23 13:15:52 [INFO] Processing SRX6384778. (6/20)
2021-08-23 13:15:52 [INFO] Processing SRX6384778-SRR9621918. (6/20)
2021-08-23 13:15:59 [INFO] Processing SRX6384777. (7/20)
2021-08-23 13:15:59 [INFO] Processing SRX6384777-SRR9621917. (7/20)
2021-08-23 13:16:08 [INFO] Processing SRX6384761. (8/20)
2021-08-23 13:16:08 [INFO] Processing SRX6384761-SRR9621901. (8/20)
2021-08-23 13:16:16 [INFO] Processing SRX6384771. (9/20)
2021-08-23 13:16:16 [INFO] Processing SRX6384771-SRR9621911. (9/20)
2021-08-23 13:16:23 [INFO] Processing SRX6384774. (10/20)
2021-08-23 13:16:23 [INFO] Processing SRX6384774-SRR9621914. (10/20)
2021-08-23 13:16:31 [INFO] Writing to disk...
2021-08-23 13:16:32 [INFO] Processing SRX6384765. (11/20)
2021-08-23 13:16:32 [INFO] Processing SRX6384765-SRR9621905. (11/20)
2021-08-23 13:16:38 [INFO] Processing SRX6384766. (12/20)
2021-08-23 13:16:38 [INFO] Processing SRX6384766-SRR9621906. (12/20)
2021-08-23 13:16:42 [INFO] Processing SRX6384767. (13/20)
2021-08-23 13:16:42 [INFO] Processing SRX6384767-SRR9621907. (13/20)
2021-08-23 13:16:50 [INFO] Processing SRX6384769. (14/20)
2021-08-23 13:16:50 [INFO] Processing SRX6384769-SRR9621909. (14/20)
2021-08-23 13:16:59 [INFO] Processing SRX6384768. (15/20)
2021-08-23 13:16:59 [INFO] Processing SRX6384768-SRR9621908. (15/20)
2021-08-23 13:17:06 [INFO] Processing SRX6384763. (16/20)
2021-08-23 13:17:06 [INFO] Processing SRX6384763-SRR9621903. (16/20)
2021-08-23 13:17:14 [INFO] Processing SRX6384775. (17/20)
2021-08-23 13:17:14 [INFO] Processing SRX6384775-SRR9621915. (17/20)
2021-08-23 13:17:22 [INFO] Processing SRX6384762. (18/20)
2021-08-23 13:17:22 [INFO] Processing SRX6384762-SRR9621902. (18/20)
2021-08-23 13:17:30 [INFO] Processing SRX6384760. (19/20)
2021-08-23 13:17:30 [INFO] Processing SRX6384760-SRR9621900. (19/20)
2021-08-23 13:17:38 [INFO] Processing SRX6384776. (20/20)
2021-08-23 13:17:38 [INFO] Processing SRX6384776-SRR9621916. (20/20)
2021-08-23 13:17:46 [INFO] Writing to disk...
2021-08-23 13:17:55 [INFO] Finished.