2021-06-10 03:22:08 [INFO] Starting.
2021-06-10 03:22:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-06-10 03:22:08 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-06-10 03:22:08 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:22:08 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:22:09 [INFO] Building aggregate.
2021-06-10 03:22:09 [INFO] Writing every 10 Runs.
2021-06-10 03:22:09 [INFO] Processing SRX5062743. (1/2)
2021-06-10 03:22:09 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-06-10 03:22:31 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-06-10 03:23:00 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-06-10 03:23:31 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-06-10 03:23:57 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-06-10 03:24:28 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-06-10 03:25:03 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-06-10 03:25:47 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-06-10 03:26:23 [INFO] Processing SRX5062742. (2/2)
2021-06-10 03:26:23 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-06-10 03:27:04 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-06-10 03:27:16 [INFO] Writing to disk...
2021-06-10 03:27:47 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX5062743. (1/2)
2021-08-02 17:08:56 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-04 22:05:10 [INFO] Starting.
2021-08-04 22:05:10 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-04 22:05:10 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-04 22:05:10 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:05:10 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:05:10 [INFO] Writing every 10 Runs.
2021-08-04 22:05:10 [INFO] Processing SRX5062743. (1/2)
2021-08-04 22:05:10 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-04 22:08:47 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-04 22:16:14 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-04 22:23:46 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-04 22:31:00 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-04 22:38:08 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-04 22:45:18 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-04 22:52:47 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-04 23:00:03 [INFO] Processing SRX5062742. (2/2)
2021-08-04 23:00:03 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-04 23:07:21 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-04 23:14:18 [INFO] Writing to disk...
2021-08-04 23:15:47 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX5062743. (1/2)
2021-08-12 14:31:18 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-12 14:31:59 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-12 14:32:36 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-12 14:33:20 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-12 14:33:58 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-12 14:34:40 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-12 14:35:17 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-12 14:35:57 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-12 14:36:34 [INFO] Processing SRX5062742. (2/2)
2021-08-12 14:36:34 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-12 14:37:10 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-12 14:37:19 [INFO] Writing to disk...
2021-08-12 14:37:40 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX5062743. (1/2)
2021-08-12 15:09:40 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-12 15:10:09 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-12 15:10:40 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-12 15:11:08 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-12 15:11:41 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-12 15:12:16 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-12 15:12:51 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-12 15:13:30 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-12 15:14:06 [INFO] Processing SRX5062742. (2/2)
2021-08-12 15:14:06 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-12 15:14:41 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-12 15:14:49 [INFO] Writing to disk...
2021-08-12 15:15:09 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX5062743. (1/2)
2021-08-12 15:44:40 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-12 15:45:11 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-12 15:45:46 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-12 15:46:23 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-12 15:46:58 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-12 15:47:38 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-12 15:48:21 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-12 15:49:06 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-12 15:49:48 [INFO] Processing SRX5062742. (2/2)
2021-08-12 15:49:48 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-12 15:50:33 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-12 15:50:43 [INFO] Writing to disk...
2021-08-12 15:51:12 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX5062743. (1/2)
2021-08-12 16:31:35 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-12 16:32:16 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-12 16:33:02 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-12 16:33:45 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-12 16:34:39 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-12 16:35:34 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-12 16:36:35 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-12 16:37:36 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-12 16:38:46 [INFO] Processing SRX5062742. (2/2)
2021-08-12 16:38:46 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-12 16:39:35 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-12 16:39:51 [INFO] Writing to disk...
2021-08-12 16:40:34 [INFO] Finished.
2021-08-20 17:53:30 [INFO] Starting.
2021-08-20 17:53:30 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-20 17:53:30 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-20 17:53:30 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:53:32 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:53:32 [INFO] Writing every 10 Runs.
2021-08-20 17:53:32 [INFO] Processing SRX5062743. (1/2)
2021-08-20 17:53:32 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-20 17:54:00 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-20 17:54:28 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-20 17:54:52 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-20 17:55:21 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-20 17:55:47 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-20 17:56:15 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-20 17:56:47 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-20 17:57:16 [INFO] Processing SRX5062742. (2/2)
2021-08-20 17:57:16 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-20 17:57:43 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-20 17:57:49 [INFO] Writing to disk...
2021-08-20 17:58:04 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX5062743. (1/2)
2021-08-23 11:28:01 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-23 11:28:14 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-23 11:28:28 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-23 11:28:44 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-23 11:29:04 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-23 11:29:19 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-23 11:29:33 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-23 11:29:50 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-23 11:30:02 [INFO] Processing SRX5062742. (2/2)
2021-08-23 11:30:02 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-23 11:30:19 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-23 11:30:23 [INFO] Writing to disk...
2021-08-23 11:30:25 [INFO] Finished.
2021-08-23 13:15:16 [INFO] Starting.
2021-08-23 13:15:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/
2021-08-23 13:15:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP170743/aggregate.hdf5
2021-08-23 13:15:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:16 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:16 [INFO] Writing every 10 Runs.
2021-08-23 13:15:16 [INFO] Processing SRX5062743. (1/2)
2021-08-23 13:15:16 [INFO] Processing SRX5062743-SRR8388757. (1/10)
2021-08-23 13:15:23 [INFO] Processing SRX5062743-SRR8388756. (2/10)
2021-08-23 13:15:30 [INFO] Processing SRX5062743-SRR8244646. (3/10)
2021-08-23 13:15:36 [INFO] Processing SRX5062743-SRR8388752. (4/10)
2021-08-23 13:15:41 [INFO] Processing SRX5062743-SRR8388751. (5/10)
2021-08-23 13:15:45 [INFO] Processing SRX5062743-SRR8388753. (6/10)
2021-08-23 13:15:49 [INFO] Processing SRX5062743-SRR8388754. (7/10)
2021-08-23 13:15:58 [INFO] Processing SRX5062743-SRR8388755. (8/10)
2021-08-23 13:16:04 [INFO] Processing SRX5062742. (2/2)
2021-08-23 13:16:04 [INFO] Processing SRX5062742-SRR8244645. (9/10)
2021-08-23 13:16:13 [INFO] Processing SRX5062742-SRR8244644. (10/10)
2021-08-23 13:16:16 [INFO] Writing to disk...
2021-08-23 13:16:17 [INFO] Finished.