2021-06-10 03:46:31 [INFO] Starting.
2021-06-10 03:46:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-06-10 03:46:31 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-06-10 03:46:31 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:46:31 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:46:32 [INFO] Building aggregate.
2021-06-10 03:46:32 [INFO] Writing every 10 Runs.
2021-06-10 03:46:32 [INFO] Processing SRX5345201. (1/4)
2021-06-10 03:46:32 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-06-10 03:47:03 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-06-10 03:47:48 [INFO] Processing SRX5345198. (2/4)
2021-06-10 03:47:48 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-06-10 03:48:41 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-06-10 03:49:16 [INFO] Processing SRX5345200. (3/4)
2021-06-10 03:49:16 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-06-10 03:50:12 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-06-10 03:51:07 [INFO] Processing SRX5345199. (4/4)
2021-06-10 03:51:07 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-06-10 03:51:56 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-06-10 03:52:54 [INFO] Writing to disk...
2021-06-10 03:53:23 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX5345201. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-04 22:06:38 [INFO] Starting.
2021-08-04 22:06:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-04 22:06:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-04 22:06:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:06:40 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:06:40 [INFO] Writing every 10 Runs.
2021-08-04 22:06:40 [INFO] Processing SRX5345201. (1/4)
2021-08-04 22:06:40 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-04 22:10:41 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-04 22:20:11 [INFO] Processing SRX5345198. (2/4)
2021-08-04 22:20:11 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-04 22:28:41 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-04 22:37:19 [INFO] Processing SRX5345200. (3/4)
2021-08-04 22:37:19 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-04 22:45:48 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-04 22:54:41 [INFO] Processing SRX5345199. (4/4)
2021-08-04 22:54:41 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-04 23:03:17 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-04 23:12:17 [INFO] Writing to disk...
2021-08-04 23:14:09 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX5345201. (1/4)
2021-08-12 14:31:18 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-12 14:32:14 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-12 14:33:06 [INFO] Processing SRX5345198. (2/4)
2021-08-12 14:33:06 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-12 14:34:01 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-12 14:34:53 [INFO] Processing SRX5345200. (3/4)
2021-08-12 14:34:53 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-12 14:35:52 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-12 14:36:46 [INFO] Processing SRX5345199. (4/4)
2021-08-12 14:36:46 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-12 14:37:32 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-12 14:38:21 [INFO] Writing to disk...
2021-08-12 14:38:44 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX5345201. (1/4)
2021-08-12 15:09:40 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-12 15:10:25 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-12 15:11:11 [INFO] Processing SRX5345198. (2/4)
2021-08-12 15:11:11 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-12 15:11:57 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-12 15:12:54 [INFO] Processing SRX5345200. (3/4)
2021-08-12 15:12:54 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-12 15:13:51 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-12 15:14:47 [INFO] Processing SRX5345199. (4/4)
2021-08-12 15:14:47 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-12 15:15:36 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-12 15:16:23 [INFO] Writing to disk...
2021-08-12 15:16:50 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX5345201. (1/4)
2021-08-12 15:44:40 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-12 15:45:28 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-12 15:46:22 [INFO] Processing SRX5345198. (2/4)
2021-08-12 15:46:22 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-12 15:47:22 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-12 15:48:22 [INFO] Processing SRX5345200. (3/4)
2021-08-12 15:48:22 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-12 15:49:32 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-12 15:50:27 [INFO] Processing SRX5345199. (4/4)
2021-08-12 15:50:27 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-12 15:51:25 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-12 15:52:19 [INFO] Writing to disk...
2021-08-12 15:52:56 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX5345201. (1/4)
2021-08-12 16:31:35 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-12 16:32:20 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-12 16:33:12 [INFO] Processing SRX5345198. (2/4)
2021-08-12 16:33:12 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-12 16:34:00 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-12 16:34:55 [INFO] Processing SRX5345200. (3/4)
2021-08-12 16:34:55 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-12 16:36:05 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-12 16:37:26 [INFO] Processing SRX5345199. (4/4)
2021-08-12 16:37:26 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-12 16:38:38 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-12 16:39:39 [INFO] Writing to disk...
2021-08-12 16:40:25 [INFO] Finished.
2021-08-20 17:58:08 [INFO] Starting.
2021-08-20 17:58:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-20 17:58:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-20 17:58:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:58:09 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:58:09 [INFO] Writing every 10 Runs.
2021-08-20 17:58:09 [INFO] Processing SRX5345201. (1/4)
2021-08-20 17:58:09 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-20 17:58:55 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-20 17:59:42 [INFO] Processing SRX5345198. (2/4)
2021-08-20 17:59:42 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-20 18:01:19 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-20 18:02:46 [INFO] Processing SRX5345200. (3/4)
2021-08-20 18:02:46 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-20 18:04:21 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-20 18:05:10 [INFO] Processing SRX5345199. (4/4)
2021-08-20 18:05:10 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-20 18:06:00 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-20 18:06:54 [INFO] Writing to disk...
2021-08-20 18:07:11 [INFO] Finished.
2021-08-23 11:29:42 [INFO] Starting.
2021-08-23 11:29:42 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-23 11:29:42 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-23 11:29:42 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:29:43 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:29:43 [INFO] Writing every 10 Runs.
2021-08-23 11:29:43 [INFO] Processing SRX5345201. (1/4)
2021-08-23 11:29:43 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-23 11:30:01 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-23 11:30:24 [INFO] Processing SRX5345198. (2/4)
2021-08-23 11:30:24 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-23 11:30:45 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-23 11:31:05 [INFO] Processing SRX5345200. (3/4)
2021-08-23 11:31:05 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-23 11:31:26 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-23 11:31:44 [INFO] Processing SRX5345199. (4/4)
2021-08-23 11:31:44 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-23 11:32:04 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-23 11:32:21 [INFO] Writing to disk...
2021-08-23 11:32:24 [INFO] Finished.
2021-08-23 13:16:25 [INFO] Starting.
2021-08-23 13:16:25 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/
2021-08-23 13:16:25 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP184300/aggregate.hdf5
2021-08-23 13:16:25 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:26 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:26 [INFO] Writing every 10 Runs.
2021-08-23 13:16:26 [INFO] Processing SRX5345201. (1/4)
2021-08-23 13:16:26 [INFO] Processing SRX5345201-SRR8543071. (1/8)
2021-08-23 13:16:32 [INFO] Processing SRX5345201-SRR8543072. (2/8)
2021-08-23 13:16:40 [INFO] Processing SRX5345198. (2/4)
2021-08-23 13:16:40 [INFO] Processing SRX5345198-SRR8543066. (3/8)
2021-08-23 13:16:48 [INFO] Processing SRX5345198-SRR8543065. (4/8)
2021-08-23 13:16:58 [INFO] Processing SRX5345200. (3/4)
2021-08-23 13:16:58 [INFO] Processing SRX5345200-SRR8543070. (5/8)
2021-08-23 13:17:05 [INFO] Processing SRX5345200-SRR8543069. (6/8)
2021-08-23 13:17:13 [INFO] Processing SRX5345199. (4/4)
2021-08-23 13:17:13 [INFO] Processing SRX5345199-SRR8543068. (7/8)
2021-08-23 13:17:22 [INFO] Processing SRX5345199-SRR8543067. (8/8)
2021-08-23 13:17:30 [INFO] Writing to disk...
2021-08-23 13:17:30 [INFO] Finished.