2021-06-10 03:42:55 [INFO] Starting.
2021-06-10 03:42:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-06-10 03:42:55 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-06-10 03:42:55 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:42:55 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:42:56 [INFO] Building aggregate.
2021-06-10 03:42:56 [INFO] Writing every 10 Runs.
2021-06-10 03:42:56 [INFO] Processing SRX5391727. (1/8)
2021-06-10 03:42:56 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-06-10 03:43:43 [INFO] Processing SRX5391723. (2/8)
2021-06-10 03:43:43 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-06-10 03:43:50 [INFO] Processing SRX5391725. (3/8)
2021-06-10 03:43:50 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-06-10 03:43:57 [INFO] Processing SRX5391729. (4/8)
2021-06-10 03:43:57 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-06-10 03:44:08 [INFO] Processing SRX5391726. (5/8)
2021-06-10 03:44:08 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-06-10 03:44:15 [INFO] Processing SRX5391724. (6/8)
2021-06-10 03:44:15 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-06-10 03:44:33 [INFO] Processing SRX5391722. (7/8)
2021-06-10 03:44:33 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-06-10 03:44:40 [INFO] Processing SRX5391728. (8/8)
2021-06-10 03:44:40 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-06-10 03:44:47 [INFO] Writing to disk...
2021-06-10 03:45:11 [INFO] Finished.
2021-08-02 17:08:56 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX5391727. (1/8)
2021-08-02 17:08:56 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-02 17:29:57 [INFO] Processing SRX5391723. (2/8)
2021-08-02 17:29:57 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-04 22:06:34 [INFO] Starting.
2021-08-04 22:06:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-04 22:06:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-04 22:06:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:06:35 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:06:35 [INFO] Writing every 10 Runs.
2021-08-04 22:06:35 [INFO] Processing SRX5391727. (1/8)
2021-08-04 22:06:35 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-04 22:10:43 [INFO] Processing SRX5391723. (2/8)
2021-08-04 22:10:43 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-04 22:18:17 [INFO] Processing SRX5391725. (3/8)
2021-08-04 22:18:17 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-04 22:28:01 [INFO] Processing SRX5391729. (4/8)
2021-08-04 22:28:01 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-04 22:35:37 [INFO] Processing SRX5391726. (5/8)
2021-08-04 22:35:37 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-04 22:43:00 [INFO] Processing SRX5391724. (6/8)
2021-08-04 22:43:00 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-04 22:50:16 [INFO] Processing SRX5391722. (7/8)
2021-08-04 22:50:16 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-04 22:57:18 [INFO] Processing SRX5391728. (8/8)
2021-08-04 22:57:18 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-04 23:04:17 [INFO] Writing to disk...
2021-08-04 23:05:20 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX5391727. (1/8)
2021-08-12 14:31:18 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-12 14:32:31 [INFO] Processing SRX5391723. (2/8)
2021-08-12 14:32:31 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-12 14:32:39 [INFO] Processing SRX5391725. (3/8)
2021-08-12 14:32:39 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-12 14:32:47 [INFO] Processing SRX5391729. (4/8)
2021-08-12 14:32:47 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-12 14:33:01 [INFO] Processing SRX5391726. (5/8)
2021-08-12 14:33:01 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-12 14:33:10 [INFO] Processing SRX5391724. (6/8)
2021-08-12 14:33:10 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-12 14:33:37 [INFO] Processing SRX5391722. (7/8)
2021-08-12 14:33:37 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-12 14:33:51 [INFO] Processing SRX5391728. (8/8)
2021-08-12 14:33:51 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-12 14:34:00 [INFO] Writing to disk...
2021-08-12 14:34:17 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX5391727. (1/8)
2021-08-12 15:09:40 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-12 15:10:38 [INFO] Processing SRX5391723. (2/8)
2021-08-12 15:10:38 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-12 15:10:45 [INFO] Processing SRX5391725. (3/8)
2021-08-12 15:10:45 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-12 15:10:53 [INFO] Processing SRX5391729. (4/8)
2021-08-12 15:10:53 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-12 15:11:08 [INFO] Processing SRX5391726. (5/8)
2021-08-12 15:11:08 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-12 15:11:17 [INFO] Processing SRX5391724. (6/8)
2021-08-12 15:11:17 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-12 15:11:36 [INFO] Processing SRX5391722. (7/8)
2021-08-12 15:11:36 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-12 15:11:47 [INFO] Processing SRX5391728. (8/8)
2021-08-12 15:11:47 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-12 15:11:58 [INFO] Writing to disk...
2021-08-12 15:12:14 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX5391727. (1/8)
2021-08-12 15:44:40 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-12 15:45:34 [INFO] Processing SRX5391723. (2/8)
2021-08-12 15:45:34 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-12 15:45:42 [INFO] Processing SRX5391725. (3/8)
2021-08-12 15:45:42 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-12 15:45:51 [INFO] Processing SRX5391729. (4/8)
2021-08-12 15:45:51 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-12 15:46:10 [INFO] Processing SRX5391726. (5/8)
2021-08-12 15:46:10 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-12 15:46:20 [INFO] Processing SRX5391724. (6/8)
2021-08-12 15:46:20 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-12 15:46:43 [INFO] Processing SRX5391722. (7/8)
2021-08-12 15:46:43 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-12 15:46:55 [INFO] Processing SRX5391728. (8/8)
2021-08-12 15:46:55 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-12 15:47:07 [INFO] Writing to disk...
2021-08-12 15:47:23 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX5391727. (1/8)
2021-08-12 16:31:35 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-12 16:32:29 [INFO] Processing SRX5391723. (2/8)
2021-08-12 16:32:29 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-12 16:32:36 [INFO] Processing SRX5391725. (3/8)
2021-08-12 16:32:36 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-12 16:32:44 [INFO] Processing SRX5391729. (4/8)
2021-08-12 16:32:44 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-12 16:32:58 [INFO] Processing SRX5391726. (5/8)
2021-08-12 16:32:58 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-12 16:33:08 [INFO] Processing SRX5391724. (6/8)
2021-08-12 16:33:08 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-12 16:33:28 [INFO] Processing SRX5391722. (7/8)
2021-08-12 16:33:28 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-12 16:33:39 [INFO] Processing SRX5391728. (8/8)
2021-08-12 16:33:39 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-12 16:33:49 [INFO] Writing to disk...
2021-08-12 16:34:04 [INFO] Finished.
2021-08-20 17:57:25 [INFO] Starting.
2021-08-20 17:57:25 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-20 17:57:25 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-20 17:57:25 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:57:27 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:57:27 [INFO] Writing every 10 Runs.
2021-08-20 17:57:27 [INFO] Processing SRX5391727. (1/8)
2021-08-20 17:57:27 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-20 17:58:13 [INFO] Processing SRX5391723. (2/8)
2021-08-20 17:58:13 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-20 17:58:21 [INFO] Processing SRX5391725. (3/8)
2021-08-20 17:58:21 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-20 17:58:28 [INFO] Processing SRX5391729. (4/8)
2021-08-20 17:58:28 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-20 17:58:42 [INFO] Processing SRX5391726. (5/8)
2021-08-20 17:58:42 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-20 17:58:50 [INFO] Processing SRX5391724. (6/8)
2021-08-20 17:58:50 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-20 17:59:11 [INFO] Processing SRX5391722. (7/8)
2021-08-20 17:59:11 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-20 17:59:21 [INFO] Processing SRX5391728. (8/8)
2021-08-20 17:59:21 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-20 17:59:28 [INFO] Writing to disk...
2021-08-20 17:59:38 [INFO] Finished.
2021-08-23 11:29:31 [INFO] Starting.
2021-08-23 11:29:31 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-23 11:29:31 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-23 11:29:31 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:29:32 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:29:32 [INFO] Writing every 10 Runs.
2021-08-23 11:29:32 [INFO] Processing SRX5391727. (1/8)
2021-08-23 11:29:32 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-23 11:29:53 [INFO] Processing SRX5391723. (2/8)
2021-08-23 11:29:53 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-23 11:29:57 [INFO] Processing SRX5391725. (3/8)
2021-08-23 11:29:57 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-23 11:30:01 [INFO] Processing SRX5391729. (4/8)
2021-08-23 11:30:01 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-23 11:30:11 [INFO] Processing SRX5391726. (5/8)
2021-08-23 11:30:11 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-23 11:30:16 [INFO] Processing SRX5391724. (6/8)
2021-08-23 11:30:16 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-23 11:30:29 [INFO] Processing SRX5391722. (7/8)
2021-08-23 11:30:29 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-23 11:30:35 [INFO] Processing SRX5391728. (8/8)
2021-08-23 11:30:35 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-23 11:30:40 [INFO] Writing to disk...
2021-08-23 11:30:42 [INFO] Finished.
2021-08-23 13:16:20 [INFO] Starting.
2021-08-23 13:16:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/
2021-08-23 13:16:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP186277/aggregate.hdf5
2021-08-23 13:16:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:21 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:21 [INFO] Writing every 10 Runs.
2021-08-23 13:16:21 [INFO] Processing SRX5391727. (1/8)
2021-08-23 13:16:21 [INFO] Processing SRX5391727-SRR8591514. (1/8)
2021-08-23 13:16:31 [INFO] Processing SRX5391723. (2/8)
2021-08-23 13:16:31 [INFO] Processing SRX5391723-SRR8591510. (2/8)
2021-08-23 13:16:35 [INFO] Processing SRX5391725. (3/8)
2021-08-23 13:16:35 [INFO] Processing SRX5391725-SRR8591512. (3/8)
2021-08-23 13:16:39 [INFO] Processing SRX5391729. (4/8)
2021-08-23 13:16:39 [INFO] Processing SRX5391729-SRR8591516. (4/8)
2021-08-23 13:16:44 [INFO] Processing SRX5391726. (5/8)
2021-08-23 13:16:44 [INFO] Processing SRX5391726-SRR8591513. (5/8)
2021-08-23 13:16:49 [INFO] Processing SRX5391724. (6/8)
2021-08-23 13:16:49 [INFO] Processing SRX5391724-SRR8591511. (6/8)
2021-08-23 13:16:57 [INFO] Processing SRX5391722. (7/8)
2021-08-23 13:16:57 [INFO] Processing SRX5391722-SRR8591509. (7/8)
2021-08-23 13:17:01 [INFO] Processing SRX5391728. (8/8)
2021-08-23 13:17:01 [INFO] Processing SRX5391728-SRR8591515. (8/8)
2021-08-23 13:17:06 [INFO] Writing to disk...
2021-08-23 13:17:07 [INFO] Finished.