2021-06-10 04:04:15 [INFO] Starting.
2021-06-10 04:04:15 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-06-10 04:04:15 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-06-10 04:04:15 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:04:15 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:04:16 [INFO] Building aggregate.
2021-06-10 04:04:16 [INFO] Writing every 10 Runs.
2021-06-10 04:04:16 [INFO] Processing SRX5797627. (1/4)
2021-06-10 04:04:16 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-06-10 04:04:42 [INFO] Processing SRX5797625. (2/4)
2021-06-10 04:04:42 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-06-10 04:04:58 [INFO] Processing SRX5797624. (3/4)
2021-06-10 04:04:58 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-06-10 04:05:12 [INFO] Processing SRX5797626. (4/4)
2021-06-10 04:05:12 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-06-10 04:05:25 [INFO] Writing to disk...
2021-06-10 04:05:29 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX5797627. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-02 17:47:15 [INFO] Processing SRX5797625. (2/4)
2021-08-02 17:47:15 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-02 18:02:31 [INFO] Processing SRX5797624. (3/4)
2021-08-02 18:02:31 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-02 18:10:27 [INFO] Processing SRX5797626. (4/4)
2021-08-02 18:10:27 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-02 18:17:17 [INFO] Writing to disk...
2021-08-02 18:18:10 [INFO] Finished.
2021-08-12 14:32:05 [INFO] Starting.
2021-08-12 14:32:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-12 14:32:05 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-12 14:32:05 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:32:06 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:32:06 [INFO] Writing every 10 Runs.
2021-08-12 14:32:06 [INFO] Processing SRX5797627. (1/4)
2021-08-12 14:32:06 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-12 14:32:24 [INFO] Processing SRX5797625. (2/4)
2021-08-12 14:32:24 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-12 14:32:42 [INFO] Processing SRX5797624. (3/4)
2021-08-12 14:32:42 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-12 14:32:56 [INFO] Processing SRX5797626. (4/4)
2021-08-12 14:32:56 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-12 14:33:12 [INFO] Writing to disk...
2021-08-12 14:33:17 [INFO] Finished.
2021-08-12 15:10:49 [INFO] Starting.
2021-08-12 15:10:49 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-12 15:10:49 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-12 15:10:49 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:10:50 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:10:50 [INFO] Writing every 10 Runs.
2021-08-12 15:10:50 [INFO] Processing SRX5797627. (1/4)
2021-08-12 15:10:50 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-12 15:11:04 [INFO] Processing SRX5797625. (2/4)
2021-08-12 15:11:04 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-12 15:11:19 [INFO] Processing SRX5797624. (3/4)
2021-08-12 15:11:19 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-12 15:11:32 [INFO] Processing SRX5797626. (4/4)
2021-08-12 15:11:32 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-12 15:11:43 [INFO] Writing to disk...
2021-08-12 15:11:46 [INFO] Finished.
2021-08-12 15:45:30 [INFO] Starting.
2021-08-12 15:45:30 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-12 15:45:30 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-12 15:45:30 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:45:30 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:45:30 [INFO] Writing every 10 Runs.
2021-08-12 15:45:30 [INFO] Processing SRX5797627. (1/4)
2021-08-12 15:45:30 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-12 15:45:49 [INFO] Processing SRX5797625. (2/4)
2021-08-12 15:45:49 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-12 15:46:08 [INFO] Processing SRX5797624. (3/4)
2021-08-12 15:46:08 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-12 15:46:24 [INFO] Processing SRX5797626. (4/4)
2021-08-12 15:46:24 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-12 15:46:40 [INFO] Writing to disk...
2021-08-12 15:46:45 [INFO] Finished.
2021-08-12 16:33:49 [INFO] Starting.
2021-08-12 16:33:49 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-12 16:33:49 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-12 16:33:49 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:33:50 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:33:50 [INFO] Writing every 10 Runs.
2021-08-12 16:33:50 [INFO] Processing SRX5797627. (1/4)
2021-08-12 16:33:50 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-12 16:34:09 [INFO] Processing SRX5797625. (2/4)
2021-08-12 16:34:09 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-12 16:34:34 [INFO] Processing SRX5797624. (3/4)
2021-08-12 16:34:34 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-12 16:34:55 [INFO] Processing SRX5797626. (4/4)
2021-08-12 16:34:55 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-12 16:35:15 [INFO] Writing to disk...
2021-08-12 16:35:22 [INFO] Finished.
2021-08-20 17:59:39 [INFO] Starting.
2021-08-20 17:59:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-20 17:59:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-20 17:59:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:41 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:41 [INFO] Writing every 10 Runs.
2021-08-20 17:59:41 [INFO] Processing SRX5797627. (1/4)
2021-08-20 17:59:41 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-20 17:59:53 [INFO] Processing SRX5797625. (2/4)
2021-08-20 17:59:53 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-20 18:00:23 [INFO] Processing SRX5797624. (3/4)
2021-08-20 18:00:23 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-20 18:01:07 [INFO] Processing SRX5797626. (4/4)
2021-08-20 18:01:07 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-20 18:01:59 [INFO] Writing to disk...
2021-08-20 18:02:08 [INFO] Finished.
2021-08-23 11:30:38 [INFO] Starting.
2021-08-23 11:30:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-23 11:30:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-23 11:30:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:38 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:38 [INFO] Writing every 10 Runs.
2021-08-23 11:30:38 [INFO] Processing SRX5797627. (1/4)
2021-08-23 11:30:38 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-23 11:30:47 [INFO] Processing SRX5797625. (2/4)
2021-08-23 11:30:47 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-23 11:30:58 [INFO] Processing SRX5797624. (3/4)
2021-08-23 11:30:58 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-23 11:31:07 [INFO] Processing SRX5797626. (4/4)
2021-08-23 11:31:07 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-23 11:31:15 [INFO] Writing to disk...
2021-08-23 11:31:16 [INFO] Finished.
2021-08-23 13:16:58 [INFO] Starting.
2021-08-23 13:16:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/
2021-08-23 13:16:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP195614/aggregate.hdf5
2021-08-23 13:16:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:59 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:59 [INFO] Writing every 10 Runs.
2021-08-23 13:16:59 [INFO] Processing SRX5797627. (1/4)
2021-08-23 13:16:59 [INFO] Processing SRX5797627-SRR9019507. (1/4)
2021-08-23 13:17:05 [INFO] Processing SRX5797625. (2/4)
2021-08-23 13:17:05 [INFO] Processing SRX5797625-SRR9019505. (2/4)
2021-08-23 13:17:13 [INFO] Processing SRX5797624. (3/4)
2021-08-23 13:17:13 [INFO] Processing SRX5797624-SRR9019504. (3/4)
2021-08-23 13:17:18 [INFO] Processing SRX5797626. (4/4)
2021-08-23 13:17:18 [INFO] Processing SRX5797626-SRR9019506. (4/4)
2021-08-23 13:17:24 [INFO] Writing to disk...
2021-08-23 13:17:25 [INFO] Finished.