2021-06-10 03:41:20 [INFO] Starting.
2021-06-10 03:41:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-06-10 03:41:20 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-06-10 03:41:20 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:41:20 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:41:21 [INFO] Building aggregate.
2021-06-10 03:41:21 [INFO] Writing every 10 Runs.
2021-06-10 03:41:21 [INFO] Processing SRX7820839. (1/8)
2021-06-10 03:41:21 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-06-10 03:42:13 [INFO] Processing SRX7820842. (2/8)
2021-06-10 03:42:13 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-06-10 03:43:28 [INFO] Processing SRX7820841. (3/8)
2021-06-10 03:43:28 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-06-10 03:45:10 [INFO] Processing SRX7820844. (4/8)
2021-06-10 03:45:10 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-06-10 03:46:25 [INFO] Processing SRX7820843. (5/8)
2021-06-10 03:46:25 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-06-10 03:48:04 [INFO] Processing SRX7820845. (6/8)
2021-06-10 03:48:04 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-06-10 03:50:09 [INFO] Processing SRX7820846. (7/8)
2021-06-10 03:50:09 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-06-10 03:51:43 [INFO] Processing SRX7820840. (8/8)
2021-06-10 03:51:43 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-06-10 03:53:20 [INFO] Writing to disk...
2021-06-10 03:54:23 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX7820839. (1/8)
2021-08-02 17:08:56 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-04 22:06:28 [INFO] Starting.
2021-08-04 22:06:28 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-04 22:06:28 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-04 22:06:28 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:06:29 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:06:29 [INFO] Writing every 10 Runs.
2021-08-04 22:06:29 [INFO] Processing SRX7820839. (1/8)
2021-08-04 22:06:29 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-04 22:10:59 [INFO] Processing SRX7820842. (2/8)
2021-08-04 22:10:59 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-04 22:24:31 [INFO] Processing SRX7820841. (3/8)
2021-08-04 22:24:31 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-04 22:33:47 [INFO] Processing SRX7820844. (4/8)
2021-08-04 22:33:47 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-04 22:42:44 [INFO] Processing SRX7820843. (5/8)
2021-08-04 22:42:44 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-04 22:52:09 [INFO] Processing SRX7820845. (6/8)
2021-08-04 22:52:09 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-04 23:01:51 [INFO] Processing SRX7820846. (7/8)
2021-08-04 23:01:51 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-04 23:11:00 [INFO] Processing SRX7820840. (8/8)
2021-08-04 23:11:00 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-04 23:20:40 [INFO] Writing to disk...
2021-08-04 23:23:57 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX7820839. (1/8)
2021-08-12 14:31:18 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-12 14:32:29 [INFO] Processing SRX7820842. (2/8)
2021-08-12 14:32:29 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-12 14:33:47 [INFO] Processing SRX7820841. (3/8)
2021-08-12 14:33:47 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-12 14:35:17 [INFO] Processing SRX7820844. (4/8)
2021-08-12 14:35:17 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-12 14:36:35 [INFO] Processing SRX7820843. (5/8)
2021-08-12 14:36:35 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-12 14:38:05 [INFO] Processing SRX7820845. (6/8)
2021-08-12 14:38:05 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-12 14:39:31 [INFO] Processing SRX7820846. (7/8)
2021-08-12 14:39:31 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-12 14:40:47 [INFO] Processing SRX7820840. (8/8)
2021-08-12 14:40:47 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-12 14:42:17 [INFO] Writing to disk...
2021-08-12 14:42:49 [INFO] Finished.
2021-08-12 15:09:40 [INFO] Starting.
2021-08-12 15:09:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-12 15:09:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-12 15:09:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:41 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:41 [INFO] Writing every 10 Runs.
2021-08-12 15:09:41 [INFO] Processing SRX7820839. (1/8)
2021-08-12 15:09:41 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-12 15:10:37 [INFO] Processing SRX7820842. (2/8)
2021-08-12 15:10:37 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-12 15:11:36 [INFO] Processing SRX7820841. (3/8)
2021-08-12 15:11:36 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-12 15:13:06 [INFO] Processing SRX7820844. (4/8)
2021-08-12 15:13:06 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-12 15:14:20 [INFO] Processing SRX7820843. (5/8)
2021-08-12 15:14:20 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-12 15:15:48 [INFO] Processing SRX7820845. (6/8)
2021-08-12 15:15:48 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-12 15:17:13 [INFO] Processing SRX7820846. (7/8)
2021-08-12 15:17:13 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-12 15:18:21 [INFO] Processing SRX7820840. (8/8)
2021-08-12 15:18:21 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-12 15:19:54 [INFO] Writing to disk...
2021-08-12 15:20:37 [INFO] Finished.
2021-08-12 15:44:38 [INFO] Starting.
2021-08-12 15:44:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-12 15:44:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-12 15:44:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:39 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:39 [INFO] Writing every 10 Runs.
2021-08-12 15:44:39 [INFO] Processing SRX7820839. (1/8)
2021-08-12 15:44:39 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-12 15:45:34 [INFO] Processing SRX7820842. (2/8)
2021-08-12 15:45:34 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-12 15:46:56 [INFO] Processing SRX7820841. (3/8)
2021-08-12 15:46:56 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-12 15:48:33 [INFO] Processing SRX7820844. (4/8)
2021-08-12 15:48:33 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-12 15:50:02 [INFO] Processing SRX7820843. (5/8)
2021-08-12 15:50:02 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-12 15:51:37 [INFO] Processing SRX7820845. (6/8)
2021-08-12 15:51:37 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-12 15:53:16 [INFO] Processing SRX7820846. (7/8)
2021-08-12 15:53:16 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-12 15:54:47 [INFO] Processing SRX7820840. (8/8)
2021-08-12 15:54:47 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-12 15:56:31 [INFO] Writing to disk...
2021-08-12 15:57:41 [INFO] Finished.
2021-08-12 16:31:35 [INFO] Starting.
2021-08-12 16:31:35 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-12 16:31:35 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-12 16:31:35 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:36 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:36 [INFO] Writing every 10 Runs.
2021-08-12 16:31:36 [INFO] Processing SRX7820839. (1/8)
2021-08-12 16:31:36 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-12 16:32:43 [INFO] Processing SRX7820842. (2/8)
2021-08-12 16:32:43 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-12 16:34:58 [INFO] Processing SRX7820841. (3/8)
2021-08-12 16:34:58 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-12 16:37:46 [INFO] Processing SRX7820844. (4/8)
2021-08-12 16:37:46 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-12 16:39:56 [INFO] Processing SRX7820843. (5/8)
2021-08-12 16:39:56 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-12 16:42:52 [INFO] Processing SRX7820845. (6/8)
2021-08-12 16:42:52 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-12 16:45:47 [INFO] Processing SRX7820846. (7/8)
2021-08-12 16:45:47 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-12 16:48:29 [INFO] Processing SRX7820840. (8/8)
2021-08-12 16:48:29 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-12 16:51:32 [INFO] Writing to disk...
2021-08-12 16:53:46 [INFO] Finished.
2021-08-20 17:56:50 [INFO] Starting.
2021-08-20 17:56:50 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-20 17:56:50 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-20 17:56:50 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:56:52 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:56:52 [INFO] Writing every 10 Runs.
2021-08-20 17:56:52 [INFO] Processing SRX7820839. (1/8)
2021-08-20 17:56:52 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-20 17:57:38 [INFO] Processing SRX7820842. (2/8)
2021-08-20 17:57:38 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-20 17:58:35 [INFO] Processing SRX7820841. (3/8)
2021-08-20 17:58:35 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-20 17:59:34 [INFO] Processing SRX7820844. (4/8)
2021-08-20 17:59:34 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-20 18:01:14 [INFO] Processing SRX7820843. (5/8)
2021-08-20 18:01:14 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-20 18:04:04 [INFO] Processing SRX7820845. (6/8)
2021-08-20 18:04:04 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-20 18:05:10 [INFO] Processing SRX7820846. (7/8)
2021-08-20 18:05:10 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-20 18:06:20 [INFO] Processing SRX7820840. (8/8)
2021-08-20 18:06:20 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-20 18:07:32 [INFO] Writing to disk...
2021-08-20 18:08:27 [INFO] Finished.
2021-08-23 11:29:23 [INFO] Starting.
2021-08-23 11:29:23 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-23 11:29:23 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-23 11:29:23 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:29:24 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:29:24 [INFO] Writing every 10 Runs.
2021-08-23 11:29:24 [INFO] Processing SRX7820839. (1/8)
2021-08-23 11:29:24 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-23 11:29:43 [INFO] Processing SRX7820842. (2/8)
2021-08-23 11:29:43 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-23 11:30:03 [INFO] Processing SRX7820841. (3/8)
2021-08-23 11:30:03 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-23 11:30:23 [INFO] Processing SRX7820844. (4/8)
2021-08-23 11:30:23 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-23 11:30:46 [INFO] Processing SRX7820843. (5/8)
2021-08-23 11:30:46 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-23 11:31:11 [INFO] Processing SRX7820845. (6/8)
2021-08-23 11:31:11 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-23 11:31:35 [INFO] Processing SRX7820846. (7/8)
2021-08-23 11:31:35 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-23 11:31:57 [INFO] Processing SRX7820840. (8/8)
2021-08-23 11:31:57 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-23 11:32:18 [INFO] Writing to disk...
2021-08-23 11:32:22 [INFO] Finished.
2021-08-23 13:16:18 [INFO] Starting.
2021-08-23 13:16:18 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/
2021-08-23 13:16:18 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP199098/aggregate.hdf5
2021-08-23 13:16:18 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:19 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:19 [INFO] Writing every 10 Runs.
2021-08-23 13:16:19 [INFO] Processing SRX7820839. (1/8)
2021-08-23 13:16:19 [INFO] Processing SRX7820839-SRR11207826. (1/8)
2021-08-23 13:16:28 [INFO] Processing SRX7820842. (2/8)
2021-08-23 13:16:28 [INFO] Processing SRX7820842-SRR11207829. (2/8)
2021-08-23 13:16:34 [INFO] Processing SRX7820841. (3/8)
2021-08-23 13:16:34 [INFO] Processing SRX7820841-SRR11207828. (3/8)
2021-08-23 13:16:45 [INFO] Processing SRX7820844. (4/8)
2021-08-23 13:16:45 [INFO] Processing SRX7820844-SRR11207831. (4/8)
2021-08-23 13:16:53 [INFO] Processing SRX7820843. (5/8)
2021-08-23 13:16:53 [INFO] Processing SRX7820843-SRR11207830. (5/8)
2021-08-23 13:16:59 [INFO] Processing SRX7820845. (6/8)
2021-08-23 13:16:59 [INFO] Processing SRX7820845-SRR11207832. (6/8)
2021-08-23 13:17:08 [INFO] Processing SRX7820846. (7/8)
2021-08-23 13:17:08 [INFO] Processing SRX7820846-SRR11207833. (7/8)
2021-08-23 13:17:17 [INFO] Processing SRX7820840. (8/8)
2021-08-23 13:17:17 [INFO] Processing SRX7820840-SRR11207827. (8/8)
2021-08-23 13:17:26 [INFO] Writing to disk...
2021-08-23 13:17:27 [INFO] Finished.