2021-06-10 00:28:05 [INFO] Starting.
2021-06-10 00:28:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-06-10 00:28:05 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-06-10 00:28:05 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 00:28:05 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 00:28:06 [INFO] Building aggregate.
2021-06-10 00:28:06 [INFO] Writing every 10 Runs.
2021-06-10 00:28:06 [INFO] Processing SRX6748369. (1/21)
2021-06-10 00:28:06 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-06-10 00:28:21 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-06-10 00:28:40 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-06-10 00:28:53 [INFO] Processing SRX6733173. (2/21)
2021-06-10 00:28:53 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-06-10 00:29:08 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-06-10 00:29:22 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-06-10 00:29:54 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-06-10 00:30:10 [INFO] Processing SRX7945522. (3/21)
2021-06-10 00:30:10 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-06-10 00:30:26 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-06-10 00:30:43 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-06-10 00:31:14 [INFO] Writing to disk...
2021-06-10 00:31:26 [INFO] Processing SRX6733167. (4/21)
2021-06-10 00:31:26 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-06-10 00:31:42 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-06-10 00:32:04 [INFO] Processing SRX6733176. (5/21)
2021-06-10 00:32:04 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-06-10 00:32:37 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-06-10 00:32:54 [INFO] Processing SRX6733175. (6/21)
2021-06-10 00:32:54 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-06-10 00:33:13 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-06-10 00:33:46 [INFO] Processing SRX6733162. (7/21)
2021-06-10 00:33:46 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-06-10 00:34:05 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-06-10 00:34:27 [INFO] Processing SRX6733171. (8/21)
2021-06-10 00:34:27 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-06-10 00:35:07 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-06-10 00:35:30 [INFO] Writing to disk...
2021-06-10 00:36:05 [INFO] Processing SRX6733166. (9/21)
2021-06-10 00:36:05 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-06-10 00:36:24 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-06-10 00:36:45 [INFO] Processing SRX6748368. (10/21)
2021-06-10 00:36:45 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-06-10 00:37:13 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-06-10 00:37:30 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-06-10 00:37:49 [INFO] Processing SRX6733165. (11/21)
2021-06-10 00:37:49 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-06-10 00:38:20 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-06-10 00:38:48 [INFO] Processing SRX6733177. (12/21)
2021-06-10 00:38:48 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-06-10 00:39:17 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-06-10 00:39:49 [INFO] Processing SRX6733168. (13/21)
2021-06-10 00:39:49 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-06-10 00:40:19 [INFO] Writing to disk...
2021-06-10 00:41:23 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-06-10 00:41:48 [INFO] Processing SRX6733164. (14/21)
2021-06-10 00:41:48 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-06-10 00:42:26 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-06-10 00:42:49 [INFO] Processing SRX6733169. (15/21)
2021-06-10 00:42:49 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-06-10 00:43:14 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-06-10 00:43:53 [INFO] Processing SRX6733163. (16/21)
2021-06-10 00:43:53 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-06-10 00:44:13 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-06-10 00:44:47 [INFO] Processing SRX6733174. (17/21)
2021-06-10 00:44:47 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-06-10 00:45:14 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-06-10 00:45:39 [INFO] Processing SRX6733172. (18/21)
2021-06-10 00:45:39 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-06-10 00:46:27 [INFO] Writing to disk...
2021-06-10 00:47:35 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-06-10 00:48:01 [INFO] Processing SRX7945523. (19/21)
2021-06-10 00:48:01 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-06-10 00:48:24 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-06-10 00:49:00 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-06-10 00:49:22 [INFO] Processing SRX6733170. (20/21)
2021-06-10 00:49:22 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-06-10 00:50:16 [INFO] Processing SRX6733161. (21/21)
2021-06-10 00:50:16 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-06-10 00:50:46 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-06-10 00:51:22 [INFO] Writing to disk...
2021-06-10 00:52:33 [INFO] Finished.
2021-08-02 17:08:56 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX6748369. (1/21)
2021-08-02 17:08:56 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-02 17:29:43 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-04 22:08:13 [INFO] Starting.
2021-08-04 22:08:13 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-04 22:08:13 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-04 22:08:13 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:08:14 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:08:14 [INFO] Writing every 10 Runs.
2021-08-04 22:08:14 [INFO] Processing SRX6748369. (1/21)
2021-08-04 22:08:14 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-04 22:12:19 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-04 22:19:51 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-04 22:27:19 [INFO] Processing SRX6733173. (2/21)
2021-08-04 22:27:19 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-04 22:34:59 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-04 22:42:10 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-04 22:49:18 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-04 22:56:22 [INFO] Processing SRX7945522. (3/21)
2021-08-04 22:56:22 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-04 23:03:29 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-04 23:10:40 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-04 23:17:54 [INFO] Writing to disk...
2021-08-04 23:18:56 [INFO] Processing SRX6733167. (4/21)
2021-08-04 23:18:56 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-04 23:26:17 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-04 23:33:49 [INFO] Processing SRX6733176. (5/21)
2021-08-04 23:33:49 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-04 23:41:17 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-04 23:48:47 [INFO] Processing SRX6733175. (6/21)
2021-08-04 23:48:47 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-04 23:56:19 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-05 00:03:55 [INFO] Processing SRX6733162. (7/21)
2021-08-05 00:03:55 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-05 00:11:29 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-05 00:19:04 [INFO] Processing SRX6733171. (8/21)
2021-08-05 00:19:04 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-05 00:26:49 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-05 00:34:36 [INFO] Writing to disk...
2021-08-05 00:36:23 [INFO] Processing SRX6733166. (9/21)
2021-08-05 00:36:23 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-05 00:44:13 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-05 00:52:03 [INFO] Processing SRX6748368. (10/21)
2021-08-05 00:52:03 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-05 00:59:39 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-05 01:07:15 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-05 01:14:55 [INFO] Processing SRX6733165. (11/21)
2021-08-05 01:14:55 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-05 01:22:43 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-05 01:30:34 [INFO] Processing SRX6733177. (12/21)
2021-08-05 01:30:34 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-05 01:38:34 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-05 01:46:36 [INFO] Processing SRX6733168. (13/21)
2021-08-05 01:46:36 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-05 01:54:41 [INFO] Writing to disk...
2021-08-05 01:57:02 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-05 02:05:11 [INFO] Processing SRX6733164. (14/21)
2021-08-05 02:05:11 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-05 02:13:21 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-05 02:21:32 [INFO] Processing SRX6733169. (15/21)
2021-08-05 02:21:32 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-05 02:29:44 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-05 02:37:55 [INFO] Processing SRX6733163. (16/21)
2021-08-05 02:37:55 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-05 02:46:03 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-05 02:54:15 [INFO] Processing SRX6733174. (17/21)
2021-08-05 02:54:15 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-05 03:02:34 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-05 03:10:58 [INFO] Processing SRX6733172. (18/21)
2021-08-05 03:10:58 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-05 03:19:20 [INFO] Writing to disk...
2021-08-05 03:22:42 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-05 03:31:08 [INFO] Processing SRX7945523. (19/21)
2021-08-05 03:31:08 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-05 03:39:56 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-05 03:48:49 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-05 03:57:36 [INFO] Processing SRX6733170. (20/21)
2021-08-05 03:57:36 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-05 04:06:51 [INFO] Processing SRX6733161. (21/21)
2021-08-05 04:06:51 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-05 04:16:06 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-05 04:25:11 [INFO] Writing to disk...
2021-08-05 04:28:42 [INFO] Finished.
2021-08-12 17:10:10 [INFO] Starting.
2021-08-12 17:10:10 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-12 17:10:10 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-12 17:10:10 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 17:10:11 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 17:10:11 [INFO] Writing every 10 Runs.
2021-08-12 17:10:11 [INFO] Processing SRX6748369. (1/21)
2021-08-12 17:10:11 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-12 17:10:33 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-12 17:10:40 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-12 17:10:56 [INFO] Processing SRX6733173. (2/21)
2021-08-12 17:10:56 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-12 17:11:09 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-12 17:11:21 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-12 17:11:38 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-12 17:11:53 [INFO] Processing SRX7945522. (3/21)
2021-08-12 17:11:53 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-12 17:12:12 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-12 17:12:29 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-12 17:12:50 [INFO] Writing to disk...
2021-08-12 17:13:02 [INFO] Processing SRX6733167. (4/21)
2021-08-12 17:13:02 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-12 17:13:19 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-12 17:13:35 [INFO] Processing SRX6733176. (5/21)
2021-08-12 17:13:35 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-12 17:14:00 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-12 17:14:27 [INFO] Processing SRX6733175. (6/21)
2021-08-12 17:14:27 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-12 17:14:47 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-12 17:15:12 [INFO] Processing SRX6733162. (7/21)
2021-08-12 17:15:12 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-12 17:15:38 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-12 17:16:01 [INFO] Processing SRX6733171. (8/21)
2021-08-12 17:16:01 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-12 17:16:27 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-12 17:16:54 [INFO] Writing to disk...
2021-08-12 17:17:17 [INFO] Processing SRX6733166. (9/21)
2021-08-12 17:17:17 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-12 17:17:42 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-12 17:18:04 [INFO] Processing SRX6748368. (10/21)
2021-08-12 17:18:04 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-12 17:18:18 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-12 17:18:35 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-12 17:18:54 [INFO] Processing SRX6733165. (11/21)
2021-08-12 17:18:54 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-12 17:19:17 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-12 17:19:43 [INFO] Processing SRX6733177. (12/21)
2021-08-12 17:19:43 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-12 17:20:12 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-12 17:20:45 [INFO] Processing SRX6733168. (13/21)
2021-08-12 17:20:45 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-12 17:21:08 [INFO] Writing to disk...
2021-08-12 17:21:34 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-12 17:22:06 [INFO] Processing SRX6733164. (14/21)
2021-08-12 17:22:06 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-12 17:22:32 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-12 17:22:57 [INFO] Processing SRX6733169. (15/21)
2021-08-12 17:22:57 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-12 17:23:19 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-12 17:23:40 [INFO] Processing SRX6733163. (16/21)
2021-08-12 17:23:40 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-12 17:24:03 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-12 17:24:23 [INFO] Processing SRX6733174. (17/21)
2021-08-12 17:24:23 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-12 17:24:51 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-12 17:25:24 [INFO] Processing SRX6733172. (18/21)
2021-08-12 17:25:24 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-12 17:25:47 [INFO] Writing to disk...
2021-08-12 17:26:17 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-12 17:26:43 [INFO] Processing SRX7945523. (19/21)
2021-08-12 17:26:43 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-12 17:27:04 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-12 17:27:25 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-12 17:27:47 [INFO] Processing SRX6733170. (20/21)
2021-08-12 17:27:47 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-12 17:28:16 [INFO] Processing SRX6733161. (21/21)
2021-08-12 17:28:16 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-12 17:28:44 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-12 17:29:04 [INFO] Writing to disk...
2021-08-12 17:29:39 [INFO] Finished.
2021-08-13 09:03:34 [INFO] Starting.
2021-08-13 09:03:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-13 09:03:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-13 09:03:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:03:34 [INFO] Building aggregate for 25kbp_raw network.
2021-08-13 09:03:34 [INFO] Writing every 10 Runs.
2021-08-13 09:03:34 [INFO] Processing SRX6748369. (1/21)
2021-08-13 09:03:34 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-13 09:03:59 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-13 09:04:08 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-13 09:04:22 [INFO] Processing SRX6733173. (2/21)
2021-08-13 09:04:22 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-13 09:04:38 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-13 09:04:53 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-13 09:05:08 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-13 09:05:27 [INFO] Processing SRX7945522. (3/21)
2021-08-13 09:05:27 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-13 09:05:43 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-13 09:06:02 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-13 09:06:20 [INFO] Writing to disk...
2021-08-13 09:06:33 [INFO] Processing SRX6733167. (4/21)
2021-08-13 09:06:33 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-13 09:06:51 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-13 09:07:10 [INFO] Processing SRX6733176. (5/21)
2021-08-13 09:07:10 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-13 09:07:33 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-13 09:07:58 [INFO] Processing SRX6733175. (6/21)
2021-08-13 09:07:58 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-13 09:08:25 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-13 09:08:53 [INFO] Processing SRX6733162. (7/21)
2021-08-13 09:08:53 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-13 09:09:24 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-13 09:09:51 [INFO] Processing SRX6733171. (8/21)
2021-08-13 09:09:51 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-13 09:10:20 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-13 09:10:50 [INFO] Writing to disk...
2021-08-13 09:11:18 [INFO] Processing SRX6733166. (9/21)
2021-08-13 09:11:18 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-13 09:11:48 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-13 09:12:14 [INFO] Processing SRX6748368. (10/21)
2021-08-13 09:12:14 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-13 09:12:29 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-13 09:12:53 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-13 09:13:12 [INFO] Processing SRX6733165. (11/21)
2021-08-13 09:13:12 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-13 09:13:41 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-13 09:14:14 [INFO] Processing SRX6733177. (12/21)
2021-08-13 09:14:14 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-13 09:14:41 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-13 09:15:12 [INFO] Processing SRX6733168. (13/21)
2021-08-13 09:15:12 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-13 09:15:43 [INFO] Writing to disk...
2021-08-13 09:16:13 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-13 09:16:37 [INFO] Processing SRX6733164. (14/21)
2021-08-13 09:16:37 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-13 09:17:02 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-13 09:17:26 [INFO] Processing SRX6733169. (15/21)
2021-08-13 09:17:26 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-13 09:17:49 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-13 09:18:09 [INFO] Processing SRX6733163. (16/21)
2021-08-13 09:18:09 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-13 09:18:32 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-13 09:18:53 [INFO] Processing SRX6733174. (17/21)
2021-08-13 09:18:53 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-13 09:19:19 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-13 09:19:44 [INFO] Processing SRX6733172. (18/21)
2021-08-13 09:19:44 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-13 09:20:07 [INFO] Writing to disk...
2021-08-13 09:20:44 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-13 09:21:12 [INFO] Processing SRX7945523. (19/21)
2021-08-13 09:21:12 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-13 09:21:35 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-13 09:21:55 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-13 09:22:15 [INFO] Processing SRX6733170. (20/21)
2021-08-13 09:22:15 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-13 09:22:43 [INFO] Processing SRX6733161. (21/21)
2021-08-13 09:22:43 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-13 09:23:06 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-13 09:23:26 [INFO] Writing to disk...
2021-08-13 09:24:05 [INFO] Finished.
2021-08-13 13:10:08 [INFO] Starting.
2021-08-13 13:10:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-13 13:10:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-13 13:10:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-13 13:10:09 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 13:10:09 [INFO] Writing every 10 Runs.
2021-08-13 13:10:09 [INFO] Processing SRX6748369. (1/21)
2021-08-13 13:10:09 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-13 13:10:36 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-13 13:10:46 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-13 13:10:59 [INFO] Processing SRX6733173. (2/21)
2021-08-13 13:10:59 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-13 13:11:16 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-13 13:11:30 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-13 13:11:47 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-13 13:12:05 [INFO] Processing SRX7945522. (3/21)
2021-08-13 13:12:05 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-13 13:12:22 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-13 13:12:38 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-13 13:12:59 [INFO] Writing to disk...
2021-08-13 13:13:13 [INFO] Processing SRX6733167. (4/21)
2021-08-13 13:13:13 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-13 13:13:36 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-13 13:13:57 [INFO] Processing SRX6733176. (5/21)
2021-08-13 13:13:57 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-13 13:14:23 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-13 13:14:52 [INFO] Processing SRX6733175. (6/21)
2021-08-13 13:14:52 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-13 13:15:18 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-13 13:15:47 [INFO] Processing SRX6733162. (7/21)
2021-08-13 13:15:47 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-13 13:16:18 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-13 13:16:45 [INFO] Processing SRX6733171. (8/21)
2021-08-13 13:16:45 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-13 13:17:21 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-13 13:17:50 [INFO] Writing to disk...
2021-08-13 13:18:20 [INFO] Processing SRX6733166. (9/21)
2021-08-13 13:18:20 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-13 13:18:52 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-13 13:19:24 [INFO] Processing SRX6748368. (10/21)
2021-08-13 13:19:24 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-13 13:19:43 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-13 13:20:05 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-13 13:20:29 [INFO] Processing SRX6733165. (11/21)
2021-08-13 13:20:29 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-13 13:21:02 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-13 13:21:33 [INFO] Processing SRX6733177. (12/21)
2021-08-13 13:21:33 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-13 13:22:09 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-13 13:22:46 [INFO] Processing SRX6733168. (13/21)
2021-08-13 13:22:46 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-13 13:23:17 [INFO] Writing to disk...
2021-08-13 13:23:55 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-13 13:24:26 [INFO] Processing SRX6733164. (14/21)
2021-08-13 13:24:26 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-13 13:24:53 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-13 13:25:21 [INFO] Processing SRX6733169. (15/21)
2021-08-13 13:25:21 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-13 13:25:46 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-13 13:26:13 [INFO] Processing SRX6733163. (16/21)
2021-08-13 13:26:13 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-13 13:26:41 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-13 13:27:08 [INFO] Processing SRX6733174. (17/21)
2021-08-13 13:27:08 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-13 13:27:39 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-13 13:28:17 [INFO] Processing SRX6733172. (18/21)
2021-08-13 13:28:17 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-13 13:28:46 [INFO] Writing to disk...
2021-08-13 13:29:37 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-13 13:30:10 [INFO] Processing SRX7945523. (19/21)
2021-08-13 13:30:10 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-13 13:30:36 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-13 13:30:58 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-13 13:31:24 [INFO] Processing SRX6733170. (20/21)
2021-08-13 13:31:24 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-13 13:31:58 [INFO] Processing SRX6733161. (21/21)
2021-08-13 13:31:58 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-13 13:32:29 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-13 13:32:58 [INFO] Writing to disk...
2021-08-13 13:33:51 [INFO] Finished.
2021-08-16 11:36:04 [INFO] Starting.
2021-08-16 11:36:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-16 11:36:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-16 11:36:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:05 [INFO] Building aggregate for 1kbp_raw network.
2021-08-16 11:36:05 [INFO] Writing every 10 Runs.
2021-08-16 11:36:05 [INFO] Processing SRX6748369. (1/21)
2021-08-16 11:36:05 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-16 11:36:33 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-16 11:36:44 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-16 11:37:00 [INFO] Processing SRX6733173. (2/21)
2021-08-16 11:37:00 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-16 11:37:20 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-16 11:37:40 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-16 11:38:00 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-16 11:38:18 [INFO] Processing SRX7945522. (3/21)
2021-08-16 11:38:18 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-16 11:38:43 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-16 11:39:04 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-16 11:39:30 [INFO] Writing to disk...
2021-08-16 11:39:47 [INFO] Processing SRX6733167. (4/21)
2021-08-16 11:39:47 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-16 11:40:12 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-16 11:40:39 [INFO] Processing SRX6733176. (5/21)
2021-08-16 11:40:39 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-16 11:41:11 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-16 11:41:39 [INFO] Processing SRX6733175. (6/21)
2021-08-16 11:41:39 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-16 11:42:13 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-16 11:42:45 [INFO] Processing SRX6733162. (7/21)
2021-08-16 11:42:45 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-16 11:43:16 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-16 11:43:51 [INFO] Processing SRX6733171. (8/21)
2021-08-16 11:43:51 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-16 11:44:26 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-16 11:45:02 [INFO] Writing to disk...
2021-08-16 11:45:43 [INFO] Processing SRX6733166. (9/21)
2021-08-16 11:45:43 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-16 11:46:18 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-16 11:46:51 [INFO] Processing SRX6748368. (10/21)
2021-08-16 11:46:51 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-16 11:47:14 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-16 11:47:41 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-16 11:48:11 [INFO] Processing SRX6733165. (11/21)
2021-08-16 11:48:11 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-16 11:48:47 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-16 11:49:24 [INFO] Processing SRX6733177. (12/21)
2021-08-16 11:49:24 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-16 11:50:04 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-16 11:50:40 [INFO] Processing SRX6733168. (13/21)
2021-08-16 11:50:40 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-16 11:51:17 [INFO] Writing to disk...
2021-08-16 11:52:12 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-16 11:53:02 [INFO] Processing SRX6733164. (14/21)
2021-08-16 11:53:02 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-16 11:53:43 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-16 11:54:24 [INFO] Processing SRX6733169. (15/21)
2021-08-16 11:54:24 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-16 11:55:02 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-16 11:55:44 [INFO] Processing SRX6733163. (16/21)
2021-08-16 11:55:44 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-16 11:56:24 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-16 11:57:04 [INFO] Processing SRX6733174. (17/21)
2021-08-16 11:57:04 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-16 11:57:51 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-16 11:58:35 [INFO] Processing SRX6733172. (18/21)
2021-08-16 11:58:35 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-16 11:59:19 [INFO] Writing to disk...
2021-08-16 12:00:32 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-16 12:01:14 [INFO] Processing SRX7945523. (19/21)
2021-08-16 12:01:14 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-16 12:01:50 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-16 12:02:28 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-16 12:03:07 [INFO] Processing SRX6733170. (20/21)
2021-08-16 12:03:07 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-16 12:03:54 [INFO] Processing SRX6733161. (21/21)
2021-08-16 12:03:54 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-16 12:04:39 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-16 12:05:22 [INFO] Writing to disk...
2021-08-16 12:06:41 [INFO] Finished.
2021-08-21 00:32:53 [INFO] Starting.
2021-08-21 00:32:53 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-21 00:32:53 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-21 00:32:53 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-21 00:32:53 [INFO] Building aggregate for 100kbp_raw network.
2021-08-21 00:32:53 [INFO] Writing every 10 Runs.
2021-08-21 00:32:53 [INFO] Processing SRX6748369. (1/21)
2021-08-21 00:32:53 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-21 00:33:09 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-21 00:33:13 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-21 00:33:21 [INFO] Processing SRX6733173. (2/21)
2021-08-21 00:33:21 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-21 00:33:30 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-21 00:33:39 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-21 00:33:46 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-21 00:33:55 [INFO] Processing SRX7945522. (3/21)
2021-08-21 00:33:55 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-21 00:34:06 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-21 00:34:17 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-21 00:34:28 [INFO] Writing to disk...
2021-08-21 00:34:34 [INFO] Processing SRX6733167. (4/21)
2021-08-21 00:34:34 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-21 00:34:44 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-21 00:34:51 [INFO] Processing SRX6733176. (5/21)
2021-08-21 00:34:51 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-21 00:35:04 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-21 00:35:17 [INFO] Processing SRX6733175. (6/21)
2021-08-21 00:35:17 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-21 00:35:28 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-21 00:35:40 [INFO] Processing SRX6733162. (7/21)
2021-08-21 00:35:40 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-21 00:35:53 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-21 00:36:05 [INFO] Processing SRX6733171. (8/21)
2021-08-21 00:36:05 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-21 00:36:18 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-21 00:36:29 [INFO] Writing to disk...
2021-08-21 00:36:41 [INFO] Processing SRX6733166. (9/21)
2021-08-21 00:36:41 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-21 00:36:53 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-21 00:37:05 [INFO] Processing SRX6748368. (10/21)
2021-08-21 00:37:05 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-21 00:37:13 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-21 00:37:22 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-21 00:37:33 [INFO] Processing SRX6733165. (11/21)
2021-08-21 00:37:33 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-21 00:37:45 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-21 00:38:00 [INFO] Processing SRX6733177. (12/21)
2021-08-21 00:38:00 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-21 00:38:14 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-21 00:38:32 [INFO] Processing SRX6733168. (13/21)
2021-08-21 00:38:32 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-21 00:38:45 [INFO] Writing to disk...
2021-08-21 00:38:58 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-21 00:39:11 [INFO] Processing SRX6733164. (14/21)
2021-08-21 00:39:11 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-21 00:39:23 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-21 00:39:38 [INFO] Processing SRX6733169. (15/21)
2021-08-21 00:39:38 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-21 00:39:47 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-21 00:40:00 [INFO] Processing SRX6733163. (16/21)
2021-08-21 00:40:00 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-21 00:40:15 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-21 00:40:28 [INFO] Processing SRX6733174. (17/21)
2021-08-21 00:40:28 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-21 00:40:42 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-21 00:40:57 [INFO] Processing SRX6733172. (18/21)
2021-08-21 00:40:57 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-21 00:41:09 [INFO] Writing to disk...
2021-08-21 00:41:22 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-21 00:41:37 [INFO] Processing SRX7945523. (19/21)
2021-08-21 00:41:37 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-21 00:41:48 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-21 00:41:59 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-21 00:42:06 [INFO] Processing SRX6733170. (20/21)
2021-08-21 00:42:06 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-21 00:42:20 [INFO] Processing SRX6733161. (21/21)
2021-08-21 00:42:20 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-21 00:42:31 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-21 00:42:42 [INFO] Writing to disk...
2021-08-21 00:42:56 [INFO] Finished.
2021-08-23 12:08:08 [INFO] Starting.
2021-08-23 12:08:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-23 12:08:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-23 12:08:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 12:08:09 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 12:08:09 [INFO] Writing every 10 Runs.
2021-08-23 12:08:09 [INFO] Processing SRX6748369. (1/21)
2021-08-23 12:08:09 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-23 12:08:19 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-23 12:08:25 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-23 12:08:34 [INFO] Processing SRX6733173. (2/21)
2021-08-23 12:08:34 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-23 12:08:42 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-23 12:08:50 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-23 12:08:57 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-23 12:09:05 [INFO] Processing SRX7945522. (3/21)
2021-08-23 12:09:05 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-23 12:09:14 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-23 12:09:22 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-23 12:09:30 [INFO] Writing to disk...
2021-08-23 12:09:32 [INFO] Processing SRX6733167. (4/21)
2021-08-23 12:09:32 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-23 12:09:41 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-23 12:09:50 [INFO] Processing SRX6733176. (5/21)
2021-08-23 12:09:50 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-23 12:10:03 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-23 12:10:15 [INFO] Processing SRX6733175. (6/21)
2021-08-23 12:10:15 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-23 12:10:28 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-23 12:10:39 [INFO] Processing SRX6733162. (7/21)
2021-08-23 12:10:39 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-23 12:10:50 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-23 12:11:01 [INFO] Processing SRX6733171. (8/21)
2021-08-23 12:11:01 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-23 12:11:12 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-23 12:11:24 [INFO] Writing to disk...
2021-08-23 12:11:36 [INFO] Processing SRX6733166. (9/21)
2021-08-23 12:11:36 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-23 12:11:46 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-23 12:11:57 [INFO] Processing SRX6748368. (10/21)
2021-08-23 12:11:57 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-23 12:12:03 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-23 12:12:12 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-23 12:12:21 [INFO] Processing SRX6733165. (11/21)
2021-08-23 12:12:21 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-23 12:12:34 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-23 12:12:45 [INFO] Processing SRX6733177. (12/21)
2021-08-23 12:12:45 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-23 12:12:58 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-23 12:13:10 [INFO] Processing SRX6733168. (13/21)
2021-08-23 12:13:10 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-23 12:13:22 [INFO] Writing to disk...
2021-08-23 12:13:34 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-23 12:13:46 [INFO] Processing SRX6733164. (14/21)
2021-08-23 12:13:46 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-23 12:13:57 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-23 12:14:08 [INFO] Processing SRX6733169. (15/21)
2021-08-23 12:14:08 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-23 12:14:18 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-23 12:14:27 [INFO] Processing SRX6733163. (16/21)
2021-08-23 12:14:27 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-23 12:14:37 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-23 12:14:46 [INFO] Processing SRX6733174. (17/21)
2021-08-23 12:14:46 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-23 12:15:03 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-23 12:15:16 [INFO] Processing SRX6733172. (18/21)
2021-08-23 12:15:16 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-23 12:15:26 [INFO] Writing to disk...
2021-08-23 12:15:38 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-23 12:15:48 [INFO] Processing SRX7945523. (19/21)
2021-08-23 12:15:48 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-23 12:15:56 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-23 12:16:03 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-23 12:16:10 [INFO] Processing SRX6733170. (20/21)
2021-08-23 12:16:10 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-23 12:16:22 [INFO] Processing SRX6733161. (21/21)
2021-08-23 12:16:22 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-23 12:16:31 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-23 12:16:39 [INFO] Writing to disk...
2021-08-23 12:16:49 [INFO] Finished.
2021-08-23 15:06:06 [INFO] Starting.
2021-08-23 15:06:06 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/
2021-08-23 15:06:06 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP218691/aggregate.hdf5
2021-08-23 15:06:06 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 15:06:06 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 15:06:06 [INFO] Writing every 10 Runs.
2021-08-23 15:06:06 [INFO] Processing SRX6748369. (1/21)
2021-08-23 15:06:06 [INFO] Processing SRX6748369-SRR10010148. (1/47)
2021-08-23 15:06:15 [INFO] Processing SRX6748369-SRR10010146. (2/47)
2021-08-23 15:06:20 [INFO] Processing SRX6748369-SRR10010147. (3/47)
2021-08-23 15:06:29 [INFO] Processing SRX6733173. (2/21)
2021-08-23 15:06:29 [INFO] Processing SRX6733173-SRR9993976. (4/47)
2021-08-23 15:06:35 [INFO] Processing SRX6733173-SRR9993975. (5/47)
2021-08-23 15:06:41 [INFO] Processing SRX6733173-SRR9993977. (6/47)
2021-08-23 15:06:48 [INFO] Processing SRX6733173-SRR9993978. (7/47)
2021-08-23 15:06:54 [INFO] Processing SRX7945522. (3/21)
2021-08-23 15:06:54 [INFO] Processing SRX7945522-SRR11342547. (8/47)
2021-08-23 15:07:01 [INFO] Processing SRX7945522-SRR11342546. (9/47)
2021-08-23 15:07:07 [INFO] Processing SRX7945522-SRR11342548. (10/47)
2021-08-23 15:07:15 [INFO] Writing to disk...
2021-08-23 15:07:15 [INFO] Processing SRX6733167. (4/21)
2021-08-23 15:07:15 [INFO] Processing SRX6733167-SRR9993965. (11/47)
2021-08-23 15:07:21 [INFO] Processing SRX6733167-SRR9993964. (12/47)
2021-08-23 15:07:28 [INFO] Processing SRX6733176. (5/21)
2021-08-23 15:07:28 [INFO] Processing SRX6733176-SRR9993983. (13/47)
2021-08-23 15:07:36 [INFO] Processing SRX6733176-SRR9993984. (14/47)
2021-08-23 15:07:42 [INFO] Processing SRX6733175. (6/21)
2021-08-23 15:07:42 [INFO] Processing SRX6733175-SRR9993981. (15/47)
2021-08-23 15:07:48 [INFO] Processing SRX6733175-SRR9993982. (16/47)
2021-08-23 15:07:56 [INFO] Processing SRX6733162. (7/21)
2021-08-23 15:07:56 [INFO] Processing SRX6733162-SRR9993955. (17/47)
2021-08-23 15:08:05 [INFO] Processing SRX6733162-SRR9993954. (18/47)
2021-08-23 15:08:12 [INFO] Processing SRX6733171. (8/21)
2021-08-23 15:08:12 [INFO] Processing SRX6733171-SRR9993971. (19/47)
2021-08-23 15:08:19 [INFO] Processing SRX6733171-SRR9993972. (20/47)
2021-08-23 15:08:26 [INFO] Writing to disk...
2021-08-23 15:08:27 [INFO] Processing SRX6733166. (9/21)
2021-08-23 15:08:27 [INFO] Processing SRX6733166-SRR9993963. (21/47)
2021-08-23 15:08:34 [INFO] Processing SRX6733166-SRR9993962. (22/47)
2021-08-23 15:08:42 [INFO] Processing SRX6748368. (10/21)
2021-08-23 15:08:42 [INFO] Processing SRX6748368-SRR10010143. (23/47)
2021-08-23 15:08:47 [INFO] Processing SRX6748368-SRR10010145. (24/47)
2021-08-23 15:08:54 [INFO] Processing SRX6748368-SRR10010144. (25/47)
2021-08-23 15:09:01 [INFO] Processing SRX6733165. (11/21)
2021-08-23 15:09:01 [INFO] Processing SRX6733165-SRR9993960. (26/47)
2021-08-23 15:09:09 [INFO] Processing SRX6733165-SRR9993961. (27/47)
2021-08-23 15:09:17 [INFO] Processing SRX6733177. (12/21)
2021-08-23 15:09:17 [INFO] Processing SRX6733177-SRR9993986. (28/47)
2021-08-23 15:09:26 [INFO] Processing SRX6733177-SRR9993985. (29/47)
2021-08-23 15:09:34 [INFO] Processing SRX6733168. (13/21)
2021-08-23 15:09:34 [INFO] Processing SRX6733168-SRR9993966. (30/47)
2021-08-23 15:09:42 [INFO] Writing to disk...
2021-08-23 15:09:51 [INFO] Processing SRX6733168-SRR9993967. (31/47)
2021-08-23 15:09:58 [INFO] Processing SRX6733164. (14/21)
2021-08-23 15:09:58 [INFO] Processing SRX6733164-SRR9993959. (32/47)
2021-08-23 15:10:06 [INFO] Processing SRX6733164-SRR9993958. (33/47)
2021-08-23 15:10:13 [INFO] Processing SRX6733169. (15/21)
2021-08-23 15:10:13 [INFO] Processing SRX6733169-SRR9993968. (34/47)
2021-08-23 15:10:21 [INFO] Processing SRX6733169-SRR9993969. (35/47)
2021-08-23 15:10:28 [INFO] Processing SRX6733163. (16/21)
2021-08-23 15:10:28 [INFO] Processing SRX6733163-SRR9993956. (36/47)
2021-08-23 15:10:35 [INFO] Processing SRX6733163-SRR9993957. (37/47)
2021-08-23 15:10:43 [INFO] Processing SRX6733174. (17/21)
2021-08-23 15:10:43 [INFO] Processing SRX6733174-SRR9993979. (38/47)
2021-08-23 15:10:49 [INFO] Processing SRX6733174-SRR9993980. (39/47)
2021-08-23 15:10:54 [INFO] Processing SRX6733172. (18/21)
2021-08-23 15:10:54 [INFO] Processing SRX6733172-SRR9993973. (40/47)
2021-08-23 15:11:04 [INFO] Writing to disk...
2021-08-23 15:11:08 [INFO] Processing SRX6733172-SRR9993974. (41/47)
2021-08-23 15:11:16 [INFO] Processing SRX7945523. (19/21)
2021-08-23 15:11:16 [INFO] Processing SRX7945523-SRR11342551. (42/47)
2021-08-23 15:11:23 [INFO] Processing SRX7945523-SRR11342550. (43/47)
2021-08-23 15:11:29 [INFO] Processing SRX7945523-SRR11342549. (44/47)
2021-08-23 15:11:37 [INFO] Processing SRX6733170. (20/21)
2021-08-23 15:11:37 [INFO] Processing SRX6733170-SRR9993970. (45/47)
2021-08-23 15:11:44 [INFO] Processing SRX6733161. (21/21)
2021-08-23 15:11:44 [INFO] Processing SRX6733161-SRR9993953. (46/47)
2021-08-23 15:11:52 [INFO] Processing SRX6733161-SRR9993952. (47/47)
2021-08-23 15:12:00 [INFO] Writing to disk...
2021-08-23 15:12:05 [INFO] Finished.