2021-06-10 02:15:10 [INFO] Starting.
2021-06-10 02:15:10 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-06-10 02:15:10 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-06-10 02:15:10 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 02:15:10 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 02:15:10 [INFO] Building aggregate.
2021-06-10 02:15:10 [INFO] Writing every 10 Runs.
2021-06-10 02:15:10 [INFO] Processing SRX6949242. (1/15)
2021-06-10 02:15:10 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-06-10 02:16:08 [INFO] Processing SRX6949251. (2/15)
2021-06-10 02:16:08 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-06-10 02:16:36 [INFO] Processing SRX6949247. (3/15)
2021-06-10 02:16:36 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-06-10 02:16:54 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-06-10 02:17:11 [INFO] Processing SRX6949245. (4/15)
2021-06-10 02:17:11 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-06-10 02:17:26 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-06-10 02:17:40 [INFO] Processing SRX6949253. (5/15)
2021-06-10 02:17:40 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-06-10 02:18:01 [INFO] Processing SRX6949244. (6/15)
2021-06-10 02:18:01 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-06-10 02:18:20 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-06-10 02:18:47 [INFO] Processing SRX6949252. (7/15)
2021-06-10 02:18:47 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-06-10 02:19:13 [INFO] Writing to disk...
2021-06-10 02:19:30 [INFO] Processing SRX6949248. (8/15)
2021-06-10 02:19:30 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-06-10 02:20:07 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-06-10 02:20:36 [INFO] Processing SRX6949240. (9/15)
2021-06-10 02:20:36 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-06-10 02:20:51 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-06-10 02:21:24 [INFO] Processing SRX6949246. (10/15)
2021-06-10 02:21:24 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-06-10 02:21:43 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-06-10 02:21:58 [INFO] Processing SRX6949254. (11/15)
2021-06-10 02:21:58 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-06-10 02:22:20 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-06-10 02:22:48 [INFO] Processing SRX6949241. (12/15)
2021-06-10 02:22:48 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-06-10 02:23:30 [INFO] Processing SRX6949243. (13/15)
2021-06-10 02:23:30 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-06-10 02:24:54 [INFO] Writing to disk...
2021-06-10 02:25:23 [INFO] Processing SRX6949250. (14/15)
2021-06-10 02:25:23 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-06-10 02:25:51 [INFO] Processing SRX6949249. (15/15)
2021-06-10 02:25:51 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-06-10 02:26:24 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-06-10 02:26:45 [INFO] Writing to disk...
2021-06-10 02:27:39 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX6949242. (1/15)
2021-08-02 17:08:56 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-02 17:49:14 [INFO] Processing SRX6949251. (2/15)
2021-08-02 17:49:14 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-02 18:04:05 [INFO] Processing SRX6949247. (3/15)
2021-08-02 18:04:05 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-02 18:12:01 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-02 18:19:31 [INFO] Processing SRX6949245. (4/15)
2021-08-02 18:19:31 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-02 18:26:52 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-02 18:34:01 [INFO] Processing SRX6949253. (5/15)
2021-08-02 18:34:01 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-02 18:41:17 [INFO] Processing SRX6949244. (6/15)
2021-08-02 18:41:17 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-02 18:48:35 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-02 18:55:56 [INFO] Processing SRX6949252. (7/15)
2021-08-02 18:55:56 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-02 19:03:43 [INFO] Writing to disk...
2021-08-02 19:05:32 [INFO] Processing SRX6949248. (8/15)
2021-08-02 19:05:32 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-02 19:12:32 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-02 19:19:51 [INFO] Processing SRX6949240. (9/15)
2021-08-02 19:19:51 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-02 19:26:45 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-02 19:33:42 [INFO] Processing SRX6949246. (10/15)
2021-08-02 19:33:42 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-02 19:40:50 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-02 19:47:49 [INFO] Processing SRX6949254. (11/15)
2021-08-02 19:47:49 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-02 19:54:55 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-02 20:02:02 [INFO] Processing SRX6949241. (12/15)
2021-08-02 20:02:02 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-02 20:10:21 [INFO] Processing SRX6949243. (13/15)
2021-08-02 20:10:21 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-02 20:19:08 [INFO] Writing to disk...
2021-08-02 20:22:15 [INFO] Processing SRX6949250. (14/15)
2021-08-02 20:22:15 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-02 20:30:19 [INFO] Processing SRX6949249. (15/15)
2021-08-02 20:30:19 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-02 20:38:27 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-02 20:46:40 [INFO] Writing to disk...
2021-08-02 20:49:32 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX6949242. (1/15)
2021-08-12 14:31:18 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-12 14:32:16 [INFO] Processing SRX6949251. (2/15)
2021-08-12 14:32:16 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-12 14:32:43 [INFO] Processing SRX6949247. (3/15)
2021-08-12 14:32:43 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-12 14:33:02 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-12 14:33:18 [INFO] Processing SRX6949245. (4/15)
2021-08-12 14:33:18 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-12 14:33:34 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-12 14:33:52 [INFO] Processing SRX6949253. (5/15)
2021-08-12 14:33:52 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-12 14:34:21 [INFO] Processing SRX6949244. (6/15)
2021-08-12 14:34:21 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-12 14:34:37 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-12 14:34:53 [INFO] Processing SRX6949252. (7/15)
2021-08-12 14:34:53 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-12 14:35:18 [INFO] Writing to disk...
2021-08-12 14:35:36 [INFO] Processing SRX6949248. (8/15)
2021-08-12 14:35:36 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-12 14:36:00 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-12 14:36:35 [INFO] Processing SRX6949240. (9/15)
2021-08-12 14:36:35 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-12 14:36:47 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-12 14:36:59 [INFO] Processing SRX6949246. (10/15)
2021-08-12 14:36:59 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-12 14:37:17 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-12 14:37:32 [INFO] Processing SRX6949254. (11/15)
2021-08-12 14:37:32 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-12 14:37:54 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-12 14:38:10 [INFO] Processing SRX6949241. (12/15)
2021-08-12 14:38:10 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-12 14:38:56 [INFO] Processing SRX6949243. (13/15)
2021-08-12 14:38:56 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-12 14:39:48 [INFO] Writing to disk...
2021-08-12 14:40:12 [INFO] Processing SRX6949250. (14/15)
2021-08-12 14:40:12 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-12 14:40:35 [INFO] Processing SRX6949249. (15/15)
2021-08-12 14:40:35 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-12 14:40:53 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-12 14:41:11 [INFO] Writing to disk...
2021-08-12 14:41:37 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX6949242. (1/15)
2021-08-12 15:09:40 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-12 15:10:25 [INFO] Processing SRX6949251. (2/15)
2021-08-12 15:10:25 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-12 15:10:46 [INFO] Processing SRX6949247. (3/15)
2021-08-12 15:10:46 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-12 15:11:03 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-12 15:11:16 [INFO] Processing SRX6949245. (4/15)
2021-08-12 15:11:16 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-12 15:11:29 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-12 15:11:43 [INFO] Processing SRX6949253. (5/15)
2021-08-12 15:11:43 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-12 15:12:05 [INFO] Processing SRX6949244. (6/15)
2021-08-12 15:12:05 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-12 15:12:21 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-12 15:12:35 [INFO] Processing SRX6949252. (7/15)
2021-08-12 15:12:35 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-12 15:12:58 [INFO] Writing to disk...
2021-08-12 15:13:13 [INFO] Processing SRX6949248. (8/15)
2021-08-12 15:13:13 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-12 15:13:34 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-12 15:14:10 [INFO] Processing SRX6949240. (9/15)
2021-08-12 15:14:10 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-12 15:14:20 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-12 15:14:32 [INFO] Processing SRX6949246. (10/15)
2021-08-12 15:14:32 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-12 15:14:50 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-12 15:15:08 [INFO] Processing SRX6949254. (11/15)
2021-08-12 15:15:08 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-12 15:15:29 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-12 15:15:42 [INFO] Processing SRX6949241. (12/15)
2021-08-12 15:15:42 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-12 15:16:25 [INFO] Processing SRX6949243. (13/15)
2021-08-12 15:16:25 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-12 15:17:12 [INFO] Writing to disk...
2021-08-12 15:17:36 [INFO] Processing SRX6949250. (14/15)
2021-08-12 15:17:36 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-12 15:18:00 [INFO] Processing SRX6949249. (15/15)
2021-08-12 15:18:00 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-12 15:18:21 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-12 15:18:38 [INFO] Writing to disk...
2021-08-12 15:19:04 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:39 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:39 [INFO] Writing every 10 Runs.
2021-08-12 15:44:39 [INFO] Processing SRX6949242. (1/15)
2021-08-12 15:44:39 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-12 15:45:41 [INFO] Processing SRX6949251. (2/15)
2021-08-12 15:45:41 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-12 15:46:10 [INFO] Processing SRX6949247. (3/15)
2021-08-12 15:46:10 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-12 15:46:31 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-12 15:46:48 [INFO] Processing SRX6949245. (4/15)
2021-08-12 15:46:48 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-12 15:47:05 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-12 15:47:25 [INFO] Processing SRX6949253. (5/15)
2021-08-12 15:47:25 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-12 15:47:55 [INFO] Processing SRX6949244. (6/15)
2021-08-12 15:47:55 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-12 15:48:16 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-12 15:48:34 [INFO] Processing SRX6949252. (7/15)
2021-08-12 15:48:34 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-12 15:49:06 [INFO] Writing to disk...
2021-08-12 15:49:30 [INFO] Processing SRX6949248. (8/15)
2021-08-12 15:49:30 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-12 15:49:54 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-12 15:50:30 [INFO] Processing SRX6949240. (9/15)
2021-08-12 15:50:30 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-12 15:50:44 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-12 15:50:59 [INFO] Processing SRX6949246. (10/15)
2021-08-12 15:50:59 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-12 15:51:27 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-12 15:51:50 [INFO] Processing SRX6949254. (11/15)
2021-08-12 15:51:50 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-12 15:52:16 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-12 15:52:37 [INFO] Processing SRX6949241. (12/15)
2021-08-12 15:52:37 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-12 15:53:37 [INFO] Processing SRX6949243. (13/15)
2021-08-12 15:53:37 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-12 15:54:50 [INFO] Writing to disk...
2021-08-12 15:55:23 [INFO] Processing SRX6949250. (14/15)
2021-08-12 15:55:23 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-12 15:55:47 [INFO] Processing SRX6949249. (15/15)
2021-08-12 15:55:47 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-12 15:56:09 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-12 15:56:32 [INFO] Writing to disk...
2021-08-12 15:57:12 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX6949242. (1/15)
2021-08-12 16:31:35 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-12 16:32:52 [INFO] Processing SRX6949251. (2/15)
2021-08-12 16:32:52 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-12 16:33:26 [INFO] Processing SRX6949247. (3/15)
2021-08-12 16:33:26 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-12 16:33:52 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-12 16:34:17 [INFO] Processing SRX6949245. (4/15)
2021-08-12 16:34:17 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-12 16:34:43 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-12 16:35:15 [INFO] Processing SRX6949253. (5/15)
2021-08-12 16:35:15 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-12 16:35:52 [INFO] Processing SRX6949244. (6/15)
2021-08-12 16:35:52 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-12 16:36:25 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-12 16:36:54 [INFO] Processing SRX6949252. (7/15)
2021-08-12 16:36:54 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-12 16:37:38 [INFO] Writing to disk...
2021-08-12 16:38:14 [INFO] Processing SRX6949248. (8/15)
2021-08-12 16:38:14 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-12 16:38:52 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-12 16:39:42 [INFO] Processing SRX6949240. (9/15)
2021-08-12 16:39:42 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-12 16:40:08 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-12 16:40:37 [INFO] Processing SRX6949246. (10/15)
2021-08-12 16:40:37 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-12 16:41:19 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-12 16:41:53 [INFO] Processing SRX6949254. (11/15)
2021-08-12 16:41:53 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-12 16:42:28 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-12 16:42:58 [INFO] Processing SRX6949241. (12/15)
2021-08-12 16:42:58 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-12 16:44:28 [INFO] Processing SRX6949243. (13/15)
2021-08-12 16:44:28 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-12 16:46:14 [INFO] Writing to disk...
2021-08-12 16:47:15 [INFO] Processing SRX6949250. (14/15)
2021-08-12 16:47:15 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-12 16:47:59 [INFO] Processing SRX6949249. (15/15)
2021-08-12 16:47:59 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-12 16:48:42 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-12 16:49:25 [INFO] Writing to disk...
2021-08-12 16:50:39 [INFO] Finished.
2021-08-20 17:38:11 [INFO] Starting.
2021-08-20 17:38:11 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-20 17:38:11 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-20 17:38:11 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:38:12 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:38:12 [INFO] Writing every 10 Runs.
2021-08-20 17:38:12 [INFO] Processing SRX6949242. (1/15)
2021-08-20 17:38:12 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-20 17:38:58 [INFO] Processing SRX6949251. (2/15)
2021-08-20 17:38:58 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-20 17:39:23 [INFO] Processing SRX6949247. (3/15)
2021-08-20 17:39:23 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-20 17:39:39 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-20 17:39:52 [INFO] Processing SRX6949245. (4/15)
2021-08-20 17:39:52 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-20 17:40:06 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-20 17:40:19 [INFO] Processing SRX6949253. (5/15)
2021-08-20 17:40:19 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-20 17:40:42 [INFO] Processing SRX6949244. (6/15)
2021-08-20 17:40:42 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-20 17:40:55 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-20 17:41:07 [INFO] Processing SRX6949252. (7/15)
2021-08-20 17:41:07 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-20 17:41:27 [INFO] Writing to disk...
2021-08-20 17:41:37 [INFO] Processing SRX6949248. (8/15)
2021-08-20 17:41:37 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-20 17:41:55 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-20 17:42:18 [INFO] Processing SRX6949240. (9/15)
2021-08-20 17:42:18 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-20 17:42:28 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-20 17:42:37 [INFO] Processing SRX6949246. (10/15)
2021-08-20 17:42:37 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-20 17:42:51 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-20 17:43:01 [INFO] Processing SRX6949254. (11/15)
2021-08-20 17:43:01 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-20 17:43:16 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-20 17:43:29 [INFO] Processing SRX6949241. (12/15)
2021-08-20 17:43:29 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-20 17:44:07 [INFO] Processing SRX6949243. (13/15)
2021-08-20 17:44:07 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-20 17:44:59 [INFO] Writing to disk...
2021-08-20 17:45:19 [INFO] Processing SRX6949250. (14/15)
2021-08-20 17:45:19 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-20 17:45:39 [INFO] Processing SRX6949249. (15/15)
2021-08-20 17:45:39 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-20 17:45:55 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-20 17:46:09 [INFO] Writing to disk...
2021-08-20 17:46:29 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX6949242. (1/15)
2021-08-23 11:28:01 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-23 11:28:21 [INFO] Processing SRX6949251. (2/15)
2021-08-23 11:28:21 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-23 11:28:36 [INFO] Processing SRX6949247. (3/15)
2021-08-23 11:28:36 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-23 11:28:46 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-23 11:28:54 [INFO] Processing SRX6949245. (4/15)
2021-08-23 11:28:54 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-23 11:29:02 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-23 11:29:10 [INFO] Processing SRX6949253. (5/15)
2021-08-23 11:29:10 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-23 11:29:24 [INFO] Processing SRX6949244. (6/15)
2021-08-23 11:29:24 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-23 11:29:33 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-23 11:29:41 [INFO] Processing SRX6949252. (7/15)
2021-08-23 11:29:41 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-23 11:29:53 [INFO] Writing to disk...
2021-08-23 11:29:56 [INFO] Processing SRX6949248. (8/15)
2021-08-23 11:29:56 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-23 11:30:07 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-23 11:30:21 [INFO] Processing SRX6949240. (9/15)
2021-08-23 11:30:21 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-23 11:30:28 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-23 11:30:33 [INFO] Processing SRX6949246. (10/15)
2021-08-23 11:30:33 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-23 11:30:42 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-23 11:30:50 [INFO] Processing SRX6949254. (11/15)
2021-08-23 11:30:50 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-23 11:31:01 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-23 11:31:11 [INFO] Processing SRX6949241. (12/15)
2021-08-23 11:31:11 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-23 11:31:33 [INFO] Processing SRX6949243. (13/15)
2021-08-23 11:31:33 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-23 11:31:53 [INFO] Writing to disk...
2021-08-23 11:31:59 [INFO] Processing SRX6949250. (14/15)
2021-08-23 11:31:59 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-23 11:32:12 [INFO] Processing SRX6949249. (15/15)
2021-08-23 11:32:12 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-23 11:32:22 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-23 11:32:30 [INFO] Writing to disk...
2021-08-23 11:32:33 [INFO] Finished.
2021-08-23 13:15:16 [INFO] Starting.
2021-08-23 13:15:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/
2021-08-23 13:15:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP224133/aggregate.hdf5
2021-08-23 13:15:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:17 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:17 [INFO] Writing every 10 Runs.
2021-08-23 13:15:17 [INFO] Processing SRX6949242. (1/15)
2021-08-23 13:15:17 [INFO] Processing SRX6949242-SRR10229697. (1/23)
2021-08-23 13:15:23 [INFO] Processing SRX6949251. (2/15)
2021-08-23 13:15:23 [INFO] Processing SRX6949251-SRR10229712. (2/23)
2021-08-23 13:15:29 [INFO] Processing SRX6949247. (3/15)
2021-08-23 13:15:29 [INFO] Processing SRX6949247-SRR10229706. (3/23)
2021-08-23 13:15:35 [INFO] Processing SRX6949247-SRR10229705. (4/23)
2021-08-23 13:15:40 [INFO] Processing SRX6949245. (4/15)
2021-08-23 13:15:40 [INFO] Processing SRX6949245-SRR10229701. (5/23)
2021-08-23 13:15:46 [INFO] Processing SRX6949245-SRR10229702. (6/23)
2021-08-23 13:15:52 [INFO] Processing SRX6949253. (5/15)
2021-08-23 13:15:52 [INFO] Processing SRX6949253-SRR10229714. (7/23)
2021-08-23 13:15:58 [INFO] Processing SRX6949244. (6/15)
2021-08-23 13:15:58 [INFO] Processing SRX6949244-SRR10229700. (8/23)
2021-08-23 13:16:04 [INFO] Processing SRX6949244-SRR10229699. (9/23)
2021-08-23 13:16:09 [INFO] Processing SRX6949252. (7/15)
2021-08-23 13:16:09 [INFO] Processing SRX6949252-SRR10229713. (10/23)
2021-08-23 13:16:16 [INFO] Writing to disk...
2021-08-23 13:16:16 [INFO] Processing SRX6949248. (8/15)
2021-08-23 13:16:16 [INFO] Processing SRX6949248-SRR10229708. (11/23)
2021-08-23 13:16:22 [INFO] Processing SRX6949248-SRR10229707. (12/23)
2021-08-23 13:16:30 [INFO] Processing SRX6949240. (9/15)
2021-08-23 13:16:30 [INFO] Processing SRX6949240-SRR10229694. (13/23)
2021-08-23 13:16:35 [INFO] Processing SRX6949240-SRR10229695. (14/23)
2021-08-23 13:16:39 [INFO] Processing SRX6949246. (10/15)
2021-08-23 13:16:39 [INFO] Processing SRX6949246-SRR10229704. (15/23)
2021-08-23 13:16:44 [INFO] Processing SRX6949246-SRR10229703. (16/23)
2021-08-23 13:16:48 [INFO] Processing SRX6949254. (11/15)
2021-08-23 13:16:48 [INFO] Processing SRX6949254-SRR10229715. (17/23)
2021-08-23 13:16:54 [INFO] Processing SRX6949254-SRR10229716. (18/23)
2021-08-23 13:16:59 [INFO] Processing SRX6949241. (12/15)
2021-08-23 13:16:59 [INFO] Processing SRX6949241-SRR10229696. (19/23)
2021-08-23 13:17:03 [INFO] Processing SRX6949243. (13/15)
2021-08-23 13:17:03 [INFO] Processing SRX6949243-SRR10229698. (20/23)
2021-08-23 13:17:08 [INFO] Writing to disk...
2021-08-23 13:17:08 [INFO] Processing SRX6949250. (14/15)
2021-08-23 13:17:08 [INFO] Processing SRX6949250-SRR10229711. (21/23)
2021-08-23 13:17:15 [INFO] Processing SRX6949249. (15/15)
2021-08-23 13:17:15 [INFO] Processing SRX6949249-SRR10229709. (22/23)
2021-08-23 13:17:21 [INFO] Processing SRX6949249-SRR10229710. (23/23)
2021-08-23 13:17:27 [INFO] Writing to disk...
2021-08-23 13:17:28 [INFO] Finished.