2021-06-10 03:37:41 [INFO] Starting.
2021-06-10 03:37:41 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-06-10 03:37:41 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-06-10 03:37:41 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:37:41 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:37:42 [INFO] Building aggregate.
2021-06-10 03:37:42 [INFO] Writing every 10 Runs.
2021-06-10 03:37:42 [INFO] Processing SRX6991980. (1/4)
2021-06-10 03:37:42 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-06-10 03:37:54 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-06-10 03:38:07 [INFO] Processing SRX6991979. (2/4)
2021-06-10 03:38:07 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-06-10 03:38:22 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-06-10 03:38:51 [INFO] Processing SRX6991982. (3/4)
2021-06-10 03:38:51 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-06-10 03:39:05 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-06-10 03:39:17 [INFO] Processing SRX6991981. (4/4)
2021-06-10 03:39:17 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-06-10 03:39:31 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-06-10 03:39:59 [INFO] Writing to disk...
2021-06-10 03:40:08 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX6991980. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-02 17:29:21 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-02 17:41:02 [INFO] Processing SRX6991979. (2/4)
2021-08-02 17:41:02 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-02 17:48:11 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-02 17:55:40 [INFO] Processing SRX6991982. (3/4)
2021-08-02 17:55:40 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-02 18:03:28 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-02 18:11:22 [INFO] Processing SRX6991981. (4/4)
2021-08-02 18:11:22 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-02 18:18:19 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-02 18:25:47 [INFO] Writing to disk...
2021-08-02 18:26:53 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX6991980. (1/4)
2021-08-12 14:31:18 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-12 14:31:41 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-12 14:32:02 [INFO] Processing SRX6991979. (2/4)
2021-08-12 14:32:02 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-12 14:32:19 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-12 14:32:39 [INFO] Processing SRX6991982. (3/4)
2021-08-12 14:32:39 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-12 14:32:56 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-12 14:33:16 [INFO] Processing SRX6991981. (4/4)
2021-08-12 14:33:16 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-12 14:33:39 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-12 14:34:03 [INFO] Writing to disk...
2021-08-12 14:34:15 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX6991980. (1/4)
2021-08-12 15:09:40 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-12 15:10:00 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-12 15:10:20 [INFO] Processing SRX6991979. (2/4)
2021-08-12 15:10:20 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-12 15:10:35 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-12 15:10:51 [INFO] Processing SRX6991982. (3/4)
2021-08-12 15:10:51 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-12 15:11:07 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-12 15:11:22 [INFO] Processing SRX6991981. (4/4)
2021-08-12 15:11:22 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-12 15:11:39 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-12 15:11:58 [INFO] Writing to disk...
2021-08-12 15:12:09 [INFO] Finished.
2021-08-12 15:44:38 [INFO] Starting.
2021-08-12 15:44:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-12 15:44:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-12 15:44:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:39 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:39 [INFO] Writing every 10 Runs.
2021-08-12 15:44:39 [INFO] Processing SRX6991980. (1/4)
2021-08-12 15:44:39 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-12 15:45:03 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-12 15:45:28 [INFO] Processing SRX6991979. (2/4)
2021-08-12 15:45:28 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-12 15:45:44 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-12 15:46:04 [INFO] Processing SRX6991982. (3/4)
2021-08-12 15:46:04 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-12 15:46:26 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-12 15:46:45 [INFO] Processing SRX6991981. (4/4)
2021-08-12 15:46:45 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-12 15:47:07 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-12 15:47:27 [INFO] Writing to disk...
2021-08-12 15:47:41 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:36 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:36 [INFO] Writing every 10 Runs.
2021-08-12 16:31:36 [INFO] Processing SRX6991980. (1/4)
2021-08-12 16:31:36 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-12 16:31:59 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-12 16:32:23 [INFO] Processing SRX6991979. (2/4)
2021-08-12 16:32:23 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-12 16:32:44 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-12 16:33:04 [INFO] Processing SRX6991982. (3/4)
2021-08-12 16:33:04 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-12 16:33:28 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-12 16:33:49 [INFO] Processing SRX6991981. (4/4)
2021-08-12 16:33:49 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-12 16:34:14 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-12 16:34:40 [INFO] Writing to disk...
2021-08-12 16:34:56 [INFO] Finished.
2021-08-20 17:56:40 [INFO] Starting.
2021-08-20 17:56:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-20 17:56:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-20 17:56:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:56:41 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:56:41 [INFO] Writing every 10 Runs.
2021-08-20 17:56:41 [INFO] Processing SRX6991980. (1/4)
2021-08-20 17:56:41 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-20 17:56:59 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-20 17:57:16 [INFO] Processing SRX6991979. (2/4)
2021-08-20 17:57:16 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-20 17:57:30 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-20 17:57:46 [INFO] Processing SRX6991982. (3/4)
2021-08-20 17:57:46 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-20 17:58:03 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-20 17:58:18 [INFO] Processing SRX6991981. (4/4)
2021-08-20 17:58:18 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-20 17:58:38 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-20 17:58:56 [INFO] Writing to disk...
2021-08-20 17:59:04 [INFO] Finished.
2021-08-23 11:28:44 [INFO] Starting.
2021-08-23 11:28:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-23 11:28:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-23 11:28:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:45 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:45 [INFO] Writing every 10 Runs.
2021-08-23 11:28:45 [INFO] Processing SRX6991980. (1/4)
2021-08-23 11:28:45 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-23 11:28:55 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-23 11:29:05 [INFO] Processing SRX6991979. (2/4)
2021-08-23 11:29:05 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-23 11:29:14 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-23 11:29:24 [INFO] Processing SRX6991982. (3/4)
2021-08-23 11:29:24 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-23 11:29:36 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-23 11:29:44 [INFO] Processing SRX6991981. (4/4)
2021-08-23 11:29:44 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-23 11:29:54 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-23 11:30:04 [INFO] Writing to disk...
2021-08-23 11:30:06 [INFO] Finished.
2021-08-23 13:16:14 [INFO] Starting.
2021-08-23 13:16:14 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/
2021-08-23 13:16:14 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP225696/aggregate.hdf5
2021-08-23 13:16:14 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:15 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:15 [INFO] Writing every 10 Runs.
2021-08-23 13:16:15 [INFO] Processing SRX6991980. (1/4)
2021-08-23 13:16:15 [INFO] Processing SRX6991980-SRR10278897. (1/8)
2021-08-23 13:16:22 [INFO] Processing SRX6991980-SRR10278896. (2/8)
2021-08-23 13:16:29 [INFO] Processing SRX6991979. (2/4)
2021-08-23 13:16:29 [INFO] Processing SRX6991979-SRR10278894. (3/8)
2021-08-23 13:16:34 [INFO] Processing SRX6991979-SRR10278895. (4/8)
2021-08-23 13:16:41 [INFO] Processing SRX6991982. (3/4)
2021-08-23 13:16:41 [INFO] Processing SRX6991982-SRR10278901. (5/8)
2021-08-23 13:16:49 [INFO] Processing SRX6991982-SRR10278900. (6/8)
2021-08-23 13:16:56 [INFO] Processing SRX6991981. (4/4)
2021-08-23 13:16:56 [INFO] Processing SRX6991981-SRR10278899. (7/8)
2021-08-23 13:17:03 [INFO] Processing SRX6991981-SRR10278898. (8/8)
2021-08-23 13:17:11 [INFO] Writing to disk...
2021-08-23 13:17:12 [INFO] Finished.