2021-06-10 04:04:02 [INFO] Starting.
2021-06-10 04:04:02 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-06-10 04:04:02 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-06-10 04:04:02 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:04:02 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:04:03 [INFO] Building aggregate.
2021-06-10 04:04:03 [INFO] Writing every 10 Runs.
2021-06-10 04:04:03 [INFO] Processing SRX7256406. (1/4)
2021-06-10 04:04:03 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-06-10 04:04:48 [INFO] Processing SRX7256404. (2/4)
2021-06-10 04:04:48 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-06-10 04:05:18 [INFO] Processing SRX7256407. (3/4)
2021-06-10 04:05:18 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-06-10 04:06:09 [INFO] Processing SRX7256405. (4/4)
2021-06-10 04:06:09 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-06-10 04:07:08 [INFO] Writing to disk...
2021-06-10 04:07:23 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX7256406. (1/4)
2021-08-02 17:08:56 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-02 17:51:36 [INFO] Processing SRX7256404. (2/4)
2021-08-02 17:51:36 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-04 22:07:11 [INFO] Starting.
2021-08-04 22:07:11 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-04 22:07:11 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-04 22:07:11 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-04 22:07:11 [INFO] Building aggregate for 1bp_raw network.
2021-08-04 22:07:11 [INFO] Writing every 10 Runs.
2021-08-04 22:07:11 [INFO] Processing SRX7256406. (1/4)
2021-08-04 22:07:11 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-04 22:11:10 [INFO] Processing SRX7256404. (2/4)
2021-08-04 22:11:10 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-04 22:19:35 [INFO] Processing SRX7256407. (3/4)
2021-08-04 22:19:35 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-04 22:27:48 [INFO] Processing SRX7256405. (4/4)
2021-08-04 22:27:48 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-04 22:35:47 [INFO] Writing to disk...
2021-08-04 22:37:21 [INFO] Finished.
2021-08-12 14:31:40 [INFO] Starting.
2021-08-12 14:31:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-12 14:31:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-12 14:31:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:41 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:41 [INFO] Writing every 10 Runs.
2021-08-12 14:31:41 [INFO] Processing SRX7256406. (1/4)
2021-08-12 14:31:41 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-12 14:32:21 [INFO] Processing SRX7256404. (2/4)
2021-08-12 14:32:21 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-12 14:33:01 [INFO] Processing SRX7256407. (3/4)
2021-08-12 14:33:01 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-12 14:33:51 [INFO] Processing SRX7256405. (4/4)
2021-08-12 14:33:51 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-12 14:34:38 [INFO] Writing to disk...
2021-08-12 14:34:53 [INFO] Finished.
2021-08-12 15:10:50 [INFO] Starting.
2021-08-12 15:10:50 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-12 15:10:50 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-12 15:10:50 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:10:51 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:10:51 [INFO] Writing every 10 Runs.
2021-08-12 15:10:51 [INFO] Processing SRX7256406. (1/4)
2021-08-12 15:10:51 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-12 15:11:23 [INFO] Processing SRX7256404. (2/4)
2021-08-12 15:11:23 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-12 15:11:55 [INFO] Processing SRX7256407. (3/4)
2021-08-12 15:11:55 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-12 15:12:39 [INFO] Processing SRX7256405. (4/4)
2021-08-12 15:12:39 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-12 15:13:23 [INFO] Writing to disk...
2021-08-12 15:13:38 [INFO] Finished.
2021-08-12 15:45:07 [INFO] Starting.
2021-08-12 15:45:07 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-12 15:45:07 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-12 15:45:07 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:45:08 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:45:08 [INFO] Writing every 10 Runs.
2021-08-12 15:45:08 [INFO] Processing SRX7256406. (1/4)
2021-08-12 15:45:08 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-12 15:45:53 [INFO] Processing SRX7256404. (2/4)
2021-08-12 15:45:53 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-12 15:46:38 [INFO] Processing SRX7256407. (3/4)
2021-08-12 15:46:38 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-12 15:47:33 [INFO] Processing SRX7256405. (4/4)
2021-08-12 15:47:33 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-12 15:48:33 [INFO] Writing to disk...
2021-08-12 15:48:54 [INFO] Finished.
2021-08-12 16:33:45 [INFO] Starting.
2021-08-12 16:33:45 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-12 16:33:45 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-12 16:33:45 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:33:46 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:33:46 [INFO] Writing every 10 Runs.
2021-08-12 16:33:46 [INFO] Processing SRX7256406. (1/4)
2021-08-12 16:33:46 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-12 16:34:31 [INFO] Processing SRX7256404. (2/4)
2021-08-12 16:34:31 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-12 16:35:36 [INFO] Processing SRX7256407. (3/4)
2021-08-12 16:35:36 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-12 16:36:56 [INFO] Processing SRX7256405. (4/4)
2021-08-12 16:36:56 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-12 16:38:15 [INFO] Writing to disk...
2021-08-12 16:38:47 [INFO] Finished.
2021-08-20 17:59:39 [INFO] Starting.
2021-08-20 17:59:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-20 17:59:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-20 17:59:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:41 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:41 [INFO] Writing every 10 Runs.
2021-08-20 17:59:41 [INFO] Processing SRX7256406. (1/4)
2021-08-20 17:59:41 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-20 18:00:39 [INFO] Processing SRX7256404. (2/4)
2021-08-20 18:00:39 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-20 18:02:32 [INFO] Processing SRX7256407. (3/4)
2021-08-20 18:02:32 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-20 18:04:02 [INFO] Processing SRX7256405. (4/4)
2021-08-20 18:04:02 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-20 18:04:39 [INFO] Writing to disk...
2021-08-20 18:04:52 [INFO] Finished.
2021-08-23 11:30:33 [INFO] Starting.
2021-08-23 11:30:33 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-23 11:30:33 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-23 11:30:33 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:34 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:34 [INFO] Writing every 10 Runs.
2021-08-23 11:30:34 [INFO] Processing SRX7256406. (1/4)
2021-08-23 11:30:34 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-23 11:30:54 [INFO] Processing SRX7256404. (2/4)
2021-08-23 11:30:54 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-23 11:31:12 [INFO] Processing SRX7256407. (3/4)
2021-08-23 11:31:12 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-23 11:31:30 [INFO] Processing SRX7256405. (4/4)
2021-08-23 11:31:30 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-23 11:31:48 [INFO] Writing to disk...
2021-08-23 11:31:50 [INFO] Finished.
2021-08-23 13:16:54 [INFO] Starting.
2021-08-23 13:16:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/
2021-08-23 13:16:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP227918/aggregate.hdf5
2021-08-23 13:16:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:55 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:55 [INFO] Writing every 10 Runs.
2021-08-23 13:16:55 [INFO] Processing SRX7256406. (1/4)
2021-08-23 13:16:55 [INFO] Processing SRX7256406-SRR10575120. (1/4)
2021-08-23 13:17:03 [INFO] Processing SRX7256404. (2/4)
2021-08-23 13:17:03 [INFO] Processing SRX7256404-SRR10575118. (2/4)
2021-08-23 13:17:11 [INFO] Processing SRX7256407. (3/4)
2021-08-23 13:17:11 [INFO] Processing SRX7256407-SRR10575121. (3/4)
2021-08-23 13:17:16 [INFO] Processing SRX7256405. (4/4)
2021-08-23 13:17:16 [INFO] Processing SRX7256405-SRR10575119. (4/4)
2021-08-23 13:17:25 [INFO] Writing to disk...
2021-08-23 13:17:26 [INFO] Finished.