2021-06-10 02:40:09 [INFO] Starting.
2021-06-10 02:40:09 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-06-10 02:40:09 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-06-10 02:40:09 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 02:40:09 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 02:40:10 [INFO] Building aggregate.
2021-06-10 02:40:10 [INFO] Writing every 10 Runs.
2021-06-10 02:40:10 [INFO] Processing SRX7515929. (1/18)
2021-06-10 02:40:10 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-06-10 02:40:37 [INFO] Processing SRX7515932. (2/18)
2021-06-10 02:40:37 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-06-10 02:41:14 [INFO] Processing SRX7515934. (3/18)
2021-06-10 02:41:14 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-06-10 02:41:39 [INFO] Processing SRX7515930. (4/18)
2021-06-10 02:41:39 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-06-10 02:42:20 [INFO] Processing SRX7515927. (5/18)
2021-06-10 02:42:20 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-06-10 02:42:50 [INFO] Processing SRX7515924. (6/18)
2021-06-10 02:42:50 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-06-10 02:43:31 [INFO] Processing SRX7515923. (7/18)
2021-06-10 02:43:31 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-06-10 02:43:58 [INFO] Processing SRX7515921. (8/18)
2021-06-10 02:43:58 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-06-10 02:44:30 [INFO] Processing SRX7515917. (9/18)
2021-06-10 02:44:30 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-06-10 02:44:50 [INFO] Processing SRX7515933. (10/18)
2021-06-10 02:44:50 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-06-10 02:45:21 [INFO] Writing to disk...
2021-06-10 02:45:50 [INFO] Processing SRX7515920. (11/18)
2021-06-10 02:45:50 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-06-10 02:46:14 [INFO] Processing SRX7515922. (12/18)
2021-06-10 02:46:14 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-06-10 02:46:58 [INFO] Processing SRX7515925. (13/18)
2021-06-10 02:46:58 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-06-10 02:47:18 [INFO] Processing SRX7515928. (14/18)
2021-06-10 02:47:18 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-06-10 02:47:44 [INFO] Processing SRX7515926. (15/18)
2021-06-10 02:47:44 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-06-10 02:48:27 [INFO] Processing SRX7515919. (16/18)
2021-06-10 02:48:27 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-06-10 02:48:57 [INFO] Processing SRX7515931. (17/18)
2021-06-10 02:48:57 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-06-10 02:49:35 [INFO] Processing SRX7515918. (18/18)
2021-06-10 02:49:35 [INFO] Writing to disk...
2021-06-10 02:50:04 [INFO] Finished.
2021-08-06 12:19:00 [INFO] SPECIAL NOTE: 1bp_raw aggregate build failed due to memory issues. It was manually copied in from a version that Ruchi calculated separately.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX7515929. (1/18)
2021-08-12 14:31:18 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-12 14:31:51 [INFO] Processing SRX7515932. (2/18)
2021-08-12 14:31:51 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-12 14:32:17 [INFO] Processing SRX7515934. (3/18)
2021-08-12 14:32:17 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-12 14:32:45 [INFO] Processing SRX7515930. (4/18)
2021-08-12 14:32:45 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-12 14:33:20 [INFO] Processing SRX7515927. (5/18)
2021-08-12 14:33:20 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-12 14:33:57 [INFO] Processing SRX7515924. (6/18)
2021-08-12 14:33:57 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-12 14:34:23 [INFO] Processing SRX7515923. (7/18)
2021-08-12 14:34:23 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-12 14:34:47 [INFO] Processing SRX7515921. (8/18)
2021-08-12 14:34:47 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-12 14:35:16 [INFO] Processing SRX7515917. (9/18)
2021-08-12 14:35:16 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-12 14:35:39 [INFO] Processing SRX7515933. (10/18)
2021-08-12 14:35:39 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-12 14:36:13 [INFO] Writing to disk...
2021-08-12 14:36:31 [INFO] Processing SRX7515920. (11/18)
2021-08-12 14:36:31 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-12 14:36:57 [INFO] Processing SRX7515922. (12/18)
2021-08-12 14:36:57 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-12 14:37:22 [INFO] Processing SRX7515925. (13/18)
2021-08-12 14:37:22 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-12 14:37:50 [INFO] Processing SRX7515928. (14/18)
2021-08-12 14:37:50 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-12 14:38:23 [INFO] Processing SRX7515926. (15/18)
2021-08-12 14:38:23 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-12 14:38:56 [INFO] Processing SRX7515919. (16/18)
2021-08-12 14:38:56 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-12 14:39:19 [INFO] Processing SRX7515931. (17/18)
2021-08-12 14:39:19 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-12 14:39:44 [INFO] Processing SRX7515918. (18/18)
2021-08-12 14:39:44 [INFO] Writing to disk...
2021-08-12 14:40:07 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX7515929. (1/18)
2021-08-12 15:09:40 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-12 15:10:11 [INFO] Processing SRX7515932. (2/18)
2021-08-12 15:10:11 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-12 15:10:35 [INFO] Processing SRX7515934. (3/18)
2021-08-12 15:10:35 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-12 15:10:58 [INFO] Processing SRX7515930. (4/18)
2021-08-12 15:10:58 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-12 15:11:33 [INFO] Processing SRX7515927. (5/18)
2021-08-12 15:11:33 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-12 15:12:06 [INFO] Processing SRX7515924. (6/18)
2021-08-12 15:12:06 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-12 15:12:36 [INFO] Processing SRX7515923. (7/18)
2021-08-12 15:12:36 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-12 15:13:00 [INFO] Processing SRX7515921. (8/18)
2021-08-12 15:13:00 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-12 15:13:26 [INFO] Processing SRX7515917. (9/18)
2021-08-12 15:13:26 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-12 15:13:48 [INFO] Processing SRX7515933. (10/18)
2021-08-12 15:13:48 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-12 15:14:21 [INFO] Writing to disk...
2021-08-12 15:14:38 [INFO] Processing SRX7515920. (11/18)
2021-08-12 15:14:38 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-12 15:15:03 [INFO] Processing SRX7515922. (12/18)
2021-08-12 15:15:03 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-12 15:15:29 [INFO] Processing SRX7515925. (13/18)
2021-08-12 15:15:29 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-12 15:15:57 [INFO] Processing SRX7515928. (14/18)
2021-08-12 15:15:57 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-12 15:16:25 [INFO] Processing SRX7515926. (15/18)
2021-08-12 15:16:25 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-12 15:16:54 [INFO] Processing SRX7515919. (16/18)
2021-08-12 15:16:54 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-12 15:17:15 [INFO] Processing SRX7515931. (17/18)
2021-08-12 15:17:15 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-12 15:17:43 [INFO] Processing SRX7515918. (18/18)
2021-08-12 15:17:43 [INFO] Writing to disk...
2021-08-12 15:18:07 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX7515929. (1/18)
2021-08-12 15:44:40 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-12 15:45:12 [INFO] Processing SRX7515932. (2/18)
2021-08-12 15:45:12 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-12 15:45:37 [INFO] Processing SRX7515934. (3/18)
2021-08-12 15:45:37 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-12 15:46:03 [INFO] Processing SRX7515930. (4/18)
2021-08-12 15:46:03 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-12 15:46:38 [INFO] Processing SRX7515927. (5/18)
2021-08-12 15:46:38 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-12 15:47:18 [INFO] Processing SRX7515924. (6/18)
2021-08-12 15:47:18 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-12 15:47:50 [INFO] Processing SRX7515923. (7/18)
2021-08-12 15:47:50 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-12 15:48:20 [INFO] Processing SRX7515921. (8/18)
2021-08-12 15:48:20 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-12 15:48:56 [INFO] Processing SRX7515917. (9/18)
2021-08-12 15:48:56 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-12 15:49:19 [INFO] Processing SRX7515933. (10/18)
2021-08-12 15:49:19 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-12 15:49:54 [INFO] Writing to disk...
2021-08-12 15:50:18 [INFO] Processing SRX7515920. (11/18)
2021-08-12 15:50:18 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-12 15:50:50 [INFO] Processing SRX7515922. (12/18)
2021-08-12 15:50:50 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-12 15:51:20 [INFO] Processing SRX7515925. (13/18)
2021-08-12 15:51:20 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-12 15:51:45 [INFO] Processing SRX7515928. (14/18)
2021-08-12 15:51:45 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-12 15:52:21 [INFO] Processing SRX7515926. (15/18)
2021-08-12 15:52:21 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-12 15:52:58 [INFO] Processing SRX7515919. (16/18)
2021-08-12 15:52:58 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-12 15:53:27 [INFO] Processing SRX7515931. (17/18)
2021-08-12 15:53:27 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-12 15:54:00 [INFO] Processing SRX7515918. (18/18)
2021-08-12 15:54:00 [INFO] Writing to disk...
2021-08-12 15:54:35 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX7515929. (1/18)
2021-08-12 16:31:35 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-12 16:32:13 [INFO] Processing SRX7515932. (2/18)
2021-08-12 16:32:13 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-12 16:32:44 [INFO] Processing SRX7515934. (3/18)
2021-08-12 16:32:44 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-12 16:33:13 [INFO] Processing SRX7515930. (4/18)
2021-08-12 16:33:13 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-12 16:33:51 [INFO] Processing SRX7515927. (5/18)
2021-08-12 16:33:51 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-12 16:34:35 [INFO] Processing SRX7515924. (6/18)
2021-08-12 16:34:35 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-12 16:35:08 [INFO] Processing SRX7515923. (7/18)
2021-08-12 16:35:08 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-12 16:35:45 [INFO] Processing SRX7515921. (8/18)
2021-08-12 16:35:45 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-12 16:36:23 [INFO] Processing SRX7515917. (9/18)
2021-08-12 16:36:23 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-12 16:36:54 [INFO] Processing SRX7515933. (10/18)
2021-08-12 16:36:54 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-12 16:37:43 [INFO] Writing to disk...
2021-08-12 16:38:13 [INFO] Processing SRX7515920. (11/18)
2021-08-12 16:38:13 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-12 16:38:53 [INFO] Processing SRX7515922. (12/18)
2021-08-12 16:38:53 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-12 16:39:31 [INFO] Processing SRX7515925. (13/18)
2021-08-12 16:39:31 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-12 16:40:10 [INFO] Processing SRX7515928. (14/18)
2021-08-12 16:40:10 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-12 16:40:55 [INFO] Processing SRX7515926. (15/18)
2021-08-12 16:40:55 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-12 16:41:45 [INFO] Processing SRX7515919. (16/18)
2021-08-12 16:41:45 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-12 16:42:22 [INFO] Processing SRX7515931. (17/18)
2021-08-12 16:42:22 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-12 16:43:01 [INFO] Processing SRX7515918. (18/18)
2021-08-12 16:43:01 [INFO] Writing to disk...
2021-08-12 16:43:37 [INFO] Finished.
2021-08-20 17:43:43 [INFO] Starting.
2021-08-20 17:43:43 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-20 17:43:43 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-20 17:43:43 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:43:44 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:43:44 [INFO] Writing every 10 Runs.
2021-08-20 17:43:44 [INFO] Processing SRX7515929. (1/18)
2021-08-20 17:43:44 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-20 17:44:09 [INFO] Processing SRX7515932. (2/18)
2021-08-20 17:44:09 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-20 17:44:33 [INFO] Processing SRX7515934. (3/18)
2021-08-20 17:44:33 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-20 17:44:54 [INFO] Processing SRX7515930. (4/18)
2021-08-20 17:44:54 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-20 17:45:22 [INFO] Processing SRX7515927. (5/18)
2021-08-20 17:45:22 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-20 17:45:52 [INFO] Processing SRX7515924. (6/18)
2021-08-20 17:45:52 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-20 17:46:14 [INFO] Processing SRX7515923. (7/18)
2021-08-20 17:46:14 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-20 17:46:34 [INFO] Processing SRX7515921. (8/18)
2021-08-20 17:46:34 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-20 17:46:55 [INFO] Processing SRX7515917. (9/18)
2021-08-20 17:46:55 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-20 17:47:14 [INFO] Processing SRX7515933. (10/18)
2021-08-20 17:47:14 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-20 17:47:41 [INFO] Writing to disk...
2021-08-20 17:47:51 [INFO] Processing SRX7515920. (11/18)
2021-08-20 17:47:51 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-20 17:48:16 [INFO] Processing SRX7515922. (12/18)
2021-08-20 17:48:16 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-20 17:48:37 [INFO] Processing SRX7515925. (13/18)
2021-08-20 17:48:37 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-20 17:48:58 [INFO] Processing SRX7515928. (14/18)
2021-08-20 17:48:58 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-20 17:49:24 [INFO] Processing SRX7515926. (15/18)
2021-08-20 17:49:24 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-20 17:49:50 [INFO] Processing SRX7515919. (16/18)
2021-08-20 17:49:50 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-20 17:50:13 [INFO] Processing SRX7515931. (17/18)
2021-08-20 17:50:13 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-20 17:50:37 [INFO] Processing SRX7515918. (18/18)
2021-08-20 17:50:37 [INFO] Writing to disk...
2021-08-20 17:50:57 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX7515929. (1/18)
2021-08-23 11:28:01 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-23 11:28:17 [INFO] Processing SRX7515932. (2/18)
2021-08-23 11:28:17 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-23 11:28:30 [INFO] Processing SRX7515934. (3/18)
2021-08-23 11:28:30 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-23 11:28:44 [INFO] Processing SRX7515930. (4/18)
2021-08-23 11:28:44 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-23 11:28:59 [INFO] Processing SRX7515927. (5/18)
2021-08-23 11:28:59 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-23 11:29:14 [INFO] Processing SRX7515924. (6/18)
2021-08-23 11:29:14 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-23 11:29:26 [INFO] Processing SRX7515923. (7/18)
2021-08-23 11:29:26 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-23 11:29:38 [INFO] Processing SRX7515921. (8/18)
2021-08-23 11:29:38 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-23 11:29:51 [INFO] Processing SRX7515917. (9/18)
2021-08-23 11:29:51 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-23 11:30:01 [INFO] Processing SRX7515933. (10/18)
2021-08-23 11:30:01 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-23 11:30:16 [INFO] Writing to disk...
2021-08-23 11:30:18 [INFO] Processing SRX7515920. (11/18)
2021-08-23 11:30:18 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-23 11:30:30 [INFO] Processing SRX7515922. (12/18)
2021-08-23 11:30:30 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-23 11:30:42 [INFO] Processing SRX7515925. (13/18)
2021-08-23 11:30:42 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-23 11:30:55 [INFO] Processing SRX7515928. (14/18)
2021-08-23 11:30:55 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-23 11:31:09 [INFO] Processing SRX7515926. (15/18)
2021-08-23 11:31:09 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-23 11:31:23 [INFO] Processing SRX7515919. (16/18)
2021-08-23 11:31:23 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-23 11:31:34 [INFO] Processing SRX7515931. (17/18)
2021-08-23 11:31:34 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-23 11:31:48 [INFO] Processing SRX7515918. (18/18)
2021-08-23 11:31:48 [INFO] Writing to disk...
2021-08-23 11:32:00 [INFO] Finished.
2021-08-23 13:15:15 [INFO] Starting.
2021-08-23 13:15:15 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/
2021-08-23 13:15:15 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP239849/aggregate.hdf5
2021-08-23 13:15:15 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:16 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:16 [INFO] Writing every 10 Runs.
2021-08-23 13:15:16 [INFO] Processing SRX7515929. (1/18)
2021-08-23 13:15:16 [INFO] Processing SRX7515929-SRR10845303. (1/17)
2021-08-23 13:15:23 [INFO] Processing SRX7515932. (2/18)
2021-08-23 13:15:23 [INFO] Processing SRX7515932-SRR10845306. (2/17)
2021-08-23 13:15:29 [INFO] Processing SRX7515934. (3/18)
2021-08-23 13:15:29 [INFO] Processing SRX7515934-SRR10845308. (3/17)
2021-08-23 13:15:36 [INFO] Processing SRX7515930. (4/18)
2021-08-23 13:15:36 [INFO] Processing SRX7515930-SRR10845304. (4/17)
2021-08-23 13:15:43 [INFO] Processing SRX7515927. (5/18)
2021-08-23 13:15:43 [INFO] Processing SRX7515927-SRR10845301. (5/17)
2021-08-23 13:15:51 [INFO] Processing SRX7515924. (6/18)
2021-08-23 13:15:51 [INFO] Processing SRX7515924-SRR10845298. (6/17)
2021-08-23 13:15:58 [INFO] Processing SRX7515923. (7/18)
2021-08-23 13:15:58 [INFO] Processing SRX7515923-SRR10845297. (7/17)
2021-08-23 13:16:05 [INFO] Processing SRX7515921. (8/18)
2021-08-23 13:16:05 [INFO] Processing SRX7515921-SRR10845295. (8/17)
2021-08-23 13:16:11 [INFO] Processing SRX7515917. (9/18)
2021-08-23 13:16:11 [INFO] Processing SRX7515917-SRR10845291. (9/17)
2021-08-23 13:16:17 [INFO] Processing SRX7515933. (10/18)
2021-08-23 13:16:17 [INFO] Processing SRX7515933-SRR10845307. (10/17)
2021-08-23 13:16:24 [INFO] Writing to disk...
2021-08-23 13:16:25 [INFO] Processing SRX7515920. (11/18)
2021-08-23 13:16:25 [INFO] Processing SRX7515920-SRR10845294. (11/17)
2021-08-23 13:16:32 [INFO] Processing SRX7515922. (12/18)
2021-08-23 13:16:32 [INFO] Processing SRX7515922-SRR10845296. (12/17)
2021-08-23 13:16:37 [INFO] Processing SRX7515925. (13/18)
2021-08-23 13:16:37 [INFO] Processing SRX7515925-SRR10845299. (13/17)
2021-08-23 13:16:43 [INFO] Processing SRX7515928. (14/18)
2021-08-23 13:16:43 [INFO] Processing SRX7515928-SRR10845302. (14/17)
2021-08-23 13:16:51 [INFO] Processing SRX7515926. (15/18)
2021-08-23 13:16:51 [INFO] Processing SRX7515926-SRR10845300. (15/17)
2021-08-23 13:16:58 [INFO] Processing SRX7515919. (16/18)
2021-08-23 13:16:58 [INFO] Processing SRX7515919-SRR10845293. (16/17)
2021-08-23 13:17:05 [INFO] Processing SRX7515931. (17/18)
2021-08-23 13:17:05 [INFO] Processing SRX7515931-SRR10845305. (17/17)
2021-08-23 13:17:11 [INFO] Processing SRX7515918. (18/18)
2021-08-23 13:17:11 [INFO] Writing to disk...
2021-08-23 13:17:12 [INFO] Finished.