2021-06-10 02:44:04 [INFO] Starting.
2021-06-10 02:44:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-06-10 02:44:04 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-06-10 02:44:04 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 02:44:04 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 02:44:05 [INFO] Building aggregate.
2021-06-10 02:44:05 [INFO] Writing every 10 Runs.
2021-06-10 02:44:05 [INFO] Processing SRX7779357. (1/16)
2021-06-10 02:44:05 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-06-10 02:44:24 [INFO] Processing SRX7779351. (2/16)
2021-06-10 02:44:24 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-06-10 02:44:31 [INFO] Processing SRX7779348. (3/16)
2021-06-10 02:44:31 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-06-10 02:44:36 [INFO] Processing SRX7779356. (4/16)
2021-06-10 02:44:36 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-06-10 02:44:49 [INFO] Processing SRX7779359. (5/16)
2021-06-10 02:44:49 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-06-10 02:45:03 [INFO] Processing SRX7779349. (6/16)
2021-06-10 02:45:03 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-06-10 02:45:11 [INFO] Processing SRX7779350. (7/16)
2021-06-10 02:45:11 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-06-10 02:45:20 [INFO] Processing SRX7779345. (8/16)
2021-06-10 02:45:20 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-06-10 02:45:49 [INFO] Processing SRX7779347. (9/16)
2021-06-10 02:45:49 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-06-10 02:46:07 [INFO] Processing SRX7779354. (10/16)
2021-06-10 02:46:07 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-06-10 02:46:19 [INFO] Writing to disk...
2021-06-10 02:46:25 [INFO] Processing SRX7779352. (11/16)
2021-06-10 02:46:25 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-06-10 02:46:54 [INFO] Processing SRX7779358. (12/16)
2021-06-10 02:46:54 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-06-10 02:47:07 [INFO] Processing SRX7779355. (13/16)
2021-06-10 02:47:07 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-06-10 02:47:19 [INFO] Processing SRX7779346. (14/16)
2021-06-10 02:47:19 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-06-10 02:47:31 [INFO] Processing SRX7779344. (15/16)
2021-06-10 02:47:31 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-06-10 02:47:45 [INFO] Processing SRX7779353. (16/16)
2021-06-10 02:47:45 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-06-10 02:48:07 [INFO] Writing to disk...
2021-06-10 02:48:20 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX7779357. (1/16)
2021-08-02 17:08:56 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-02 17:30:53 [INFO] Processing SRX7779351. (2/16)
2021-08-02 17:30:53 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-02 17:41:18 [INFO] Processing SRX7779348. (3/16)
2021-08-02 17:41:18 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-02 17:48:29 [INFO] Processing SRX7779356. (4/16)
2021-08-02 17:48:29 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-02 17:55:42 [INFO] Processing SRX7779359. (5/16)
2021-08-02 17:55:42 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-02 18:03:50 [INFO] Processing SRX7779349. (6/16)
2021-08-02 18:03:50 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-02 18:11:09 [INFO] Processing SRX7779350. (7/16)
2021-08-02 18:11:09 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-02 18:17:59 [INFO] Processing SRX7779345. (8/16)
2021-08-02 18:17:59 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-02 18:25:43 [INFO] Processing SRX7779347. (9/16)
2021-08-02 18:25:43 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-02 18:32:39 [INFO] Processing SRX7779354. (10/16)
2021-08-02 18:32:39 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-02 18:39:26 [INFO] Writing to disk...
2021-08-02 18:40:33 [INFO] Processing SRX7779352. (11/16)
2021-08-02 18:40:33 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-02 18:47:19 [INFO] Processing SRX7779358. (12/16)
2021-08-02 18:47:19 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-02 18:54:21 [INFO] Processing SRX7779355. (13/16)
2021-08-02 18:54:21 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-02 19:01:30 [INFO] Processing SRX7779346. (14/16)
2021-08-02 19:01:30 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-02 19:08:21 [INFO] Processing SRX7779344. (15/16)
2021-08-02 19:08:21 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-02 19:15:06 [INFO] Processing SRX7779353. (16/16)
2021-08-02 19:15:06 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-02 19:22:32 [INFO] Writing to disk...
2021-08-02 19:24:09 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX7779357. (1/16)
2021-08-12 14:31:18 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-12 14:31:26 [INFO] Processing SRX7779351. (2/16)
2021-08-12 14:31:26 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-12 14:31:35 [INFO] Processing SRX7779348. (3/16)
2021-08-12 14:31:35 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-12 14:31:46 [INFO] Processing SRX7779356. (4/16)
2021-08-12 14:31:46 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-12 14:31:54 [INFO] Processing SRX7779359. (5/16)
2021-08-12 14:31:54 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-12 14:32:07 [INFO] Processing SRX7779349. (6/16)
2021-08-12 14:32:07 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-12 14:32:15 [INFO] Processing SRX7779350. (7/16)
2021-08-12 14:32:15 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-12 14:32:24 [INFO] Processing SRX7779345. (8/16)
2021-08-12 14:32:24 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-12 14:32:41 [INFO] Processing SRX7779347. (9/16)
2021-08-12 14:32:41 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-12 14:33:01 [INFO] Processing SRX7779354. (10/16)
2021-08-12 14:33:01 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-12 14:33:13 [INFO] Writing to disk...
2021-08-12 14:33:17 [INFO] Processing SRX7779352. (11/16)
2021-08-12 14:33:17 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-12 14:33:29 [INFO] Processing SRX7779358. (12/16)
2021-08-12 14:33:29 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-12 14:33:42 [INFO] Processing SRX7779355. (13/16)
2021-08-12 14:33:42 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-12 14:33:55 [INFO] Processing SRX7779346. (14/16)
2021-08-12 14:33:55 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-12 14:34:15 [INFO] Processing SRX7779344. (15/16)
2021-08-12 14:34:15 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-12 14:34:33 [INFO] Processing SRX7779353. (16/16)
2021-08-12 14:34:33 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-12 14:34:44 [INFO] Writing to disk...
2021-08-12 14:35:00 [INFO] Finished.
2021-08-12 15:09:40 [INFO] Starting.
2021-08-12 15:09:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-12 15:09:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-12 15:09:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:41 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:41 [INFO] Writing every 10 Runs.
2021-08-12 15:09:41 [INFO] Processing SRX7779357. (1/16)
2021-08-12 15:09:41 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-12 15:09:49 [INFO] Processing SRX7779351. (2/16)
2021-08-12 15:09:49 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-12 15:09:57 [INFO] Processing SRX7779348. (3/16)
2021-08-12 15:09:57 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-12 15:10:06 [INFO] Processing SRX7779356. (4/16)
2021-08-12 15:10:06 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-12 15:10:16 [INFO] Processing SRX7779359. (5/16)
2021-08-12 15:10:16 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-12 15:10:27 [INFO] Processing SRX7779349. (6/16)
2021-08-12 15:10:27 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-12 15:10:35 [INFO] Processing SRX7779350. (7/16)
2021-08-12 15:10:35 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-12 15:10:43 [INFO] Processing SRX7779345. (8/16)
2021-08-12 15:10:43 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-12 15:10:56 [INFO] Processing SRX7779347. (9/16)
2021-08-12 15:10:56 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-12 15:11:11 [INFO] Processing SRX7779354. (10/16)
2021-08-12 15:11:11 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-12 15:11:21 [INFO] Writing to disk...
2021-08-12 15:11:25 [INFO] Processing SRX7779352. (11/16)
2021-08-12 15:11:25 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-12 15:11:35 [INFO] Processing SRX7779358. (12/16)
2021-08-12 15:11:35 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-12 15:11:49 [INFO] Processing SRX7779355. (13/16)
2021-08-12 15:11:49 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-12 15:12:00 [INFO] Processing SRX7779346. (14/16)
2021-08-12 15:12:00 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-12 15:12:20 [INFO] Processing SRX7779344. (15/16)
2021-08-12 15:12:20 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-12 15:12:33 [INFO] Processing SRX7779353. (16/16)
2021-08-12 15:12:33 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-12 15:12:45 [INFO] Writing to disk...
2021-08-12 15:13:02 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX7779357. (1/16)
2021-08-12 15:44:40 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-12 15:44:53 [INFO] Processing SRX7779351. (2/16)
2021-08-12 15:44:53 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-12 15:45:04 [INFO] Processing SRX7779348. (3/16)
2021-08-12 15:45:04 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-12 15:45:16 [INFO] Processing SRX7779356. (4/16)
2021-08-12 15:45:16 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-12 15:45:28 [INFO] Processing SRX7779359. (5/16)
2021-08-12 15:45:28 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-12 15:45:41 [INFO] Processing SRX7779349. (6/16)
2021-08-12 15:45:41 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-12 15:45:52 [INFO] Processing SRX7779350. (7/16)
2021-08-12 15:45:52 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-12 15:46:01 [INFO] Processing SRX7779345. (8/16)
2021-08-12 15:46:01 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-12 15:46:17 [INFO] Processing SRX7779347. (9/16)
2021-08-12 15:46:17 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-12 15:46:37 [INFO] Processing SRX7779354. (10/16)
2021-08-12 15:46:37 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-12 15:46:51 [INFO] Writing to disk...
2021-08-12 15:46:58 [INFO] Processing SRX7779352. (11/16)
2021-08-12 15:46:59 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-12 15:47:13 [INFO] Processing SRX7779358. (12/16)
2021-08-12 15:47:13 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-12 15:47:31 [INFO] Processing SRX7779355. (13/16)
2021-08-12 15:47:31 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-12 15:47:49 [INFO] Processing SRX7779346. (14/16)
2021-08-12 15:47:49 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-12 15:48:09 [INFO] Processing SRX7779344. (15/16)
2021-08-12 15:48:09 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-12 15:48:26 [INFO] Processing SRX7779353. (16/16)
2021-08-12 15:48:26 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-12 15:48:45 [INFO] Writing to disk...
2021-08-12 15:49:07 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX7779357. (1/16)
2021-08-12 16:31:35 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-12 16:31:52 [INFO] Processing SRX7779351. (2/16)
2021-08-12 16:31:52 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-12 16:32:04 [INFO] Processing SRX7779348. (3/16)
2021-08-12 16:32:04 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-12 16:32:19 [INFO] Processing SRX7779356. (4/16)
2021-08-12 16:32:19 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-12 16:32:37 [INFO] Processing SRX7779359. (5/16)
2021-08-12 16:32:37 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-12 16:32:55 [INFO] Processing SRX7779349. (6/16)
2021-08-12 16:32:55 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-12 16:33:06 [INFO] Processing SRX7779350. (7/16)
2021-08-12 16:33:06 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-12 16:33:18 [INFO] Processing SRX7779345. (8/16)
2021-08-12 16:33:18 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-12 16:33:41 [INFO] Processing SRX7779347. (9/16)
2021-08-12 16:33:41 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-12 16:34:01 [INFO] Processing SRX7779354. (10/16)
2021-08-12 16:34:01 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-12 16:34:19 [INFO] Writing to disk...
2021-08-12 16:34:29 [INFO] Processing SRX7779352. (11/16)
2021-08-12 16:34:29 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-12 16:34:52 [INFO] Processing SRX7779358. (12/16)
2021-08-12 16:34:52 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-12 16:35:15 [INFO] Processing SRX7779355. (13/16)
2021-08-12 16:35:15 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-12 16:35:35 [INFO] Processing SRX7779346. (14/16)
2021-08-12 16:35:35 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-12 16:36:01 [INFO] Processing SRX7779344. (15/16)
2021-08-12 16:36:01 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-12 16:36:27 [INFO] Processing SRX7779353. (16/16)
2021-08-12 16:36:27 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-12 16:36:50 [INFO] Writing to disk...
2021-08-12 16:37:15 [INFO] Finished.
2021-08-20 17:44:51 [INFO] Starting.
2021-08-20 17:44:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-20 17:44:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-20 17:44:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:44:52 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:44:52 [INFO] Writing every 10 Runs.
2021-08-20 17:44:52 [INFO] Processing SRX7779357. (1/16)
2021-08-20 17:44:52 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-20 17:44:58 [INFO] Processing SRX7779351. (2/16)
2021-08-20 17:44:58 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-20 17:45:04 [INFO] Processing SRX7779348. (3/16)
2021-08-20 17:45:04 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-20 17:45:13 [INFO] Processing SRX7779356. (4/16)
2021-08-20 17:45:13 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-20 17:45:19 [INFO] Processing SRX7779359. (5/16)
2021-08-20 17:45:19 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-20 17:45:30 [INFO] Processing SRX7779349. (6/16)
2021-08-20 17:45:30 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-20 17:45:36 [INFO] Processing SRX7779350. (7/16)
2021-08-20 17:45:36 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-20 17:45:43 [INFO] Processing SRX7779345. (8/16)
2021-08-20 17:45:43 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-20 17:45:55 [INFO] Processing SRX7779347. (9/16)
2021-08-20 17:45:55 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-20 17:46:10 [INFO] Processing SRX7779354. (10/16)
2021-08-20 17:46:10 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-20 17:46:18 [INFO] Writing to disk...
2021-08-20 17:46:21 [INFO] Processing SRX7779352. (11/16)
2021-08-20 17:46:21 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-20 17:46:32 [INFO] Processing SRX7779358. (12/16)
2021-08-20 17:46:32 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-20 17:46:44 [INFO] Processing SRX7779355. (13/16)
2021-08-20 17:46:44 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-20 17:46:55 [INFO] Processing SRX7779346. (14/16)
2021-08-20 17:46:55 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-20 17:47:10 [INFO] Processing SRX7779344. (15/16)
2021-08-20 17:47:10 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-20 17:47:23 [INFO] Processing SRX7779353. (16/16)
2021-08-20 17:47:23 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-20 17:47:32 [INFO] Writing to disk...
2021-08-20 17:47:45 [INFO] Finished.
2021-08-23 11:28:00 [INFO] Starting.
2021-08-23 11:28:00 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-23 11:28:00 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-23 11:28:00 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:01 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:01 [INFO] Writing every 10 Runs.
2021-08-23 11:28:01 [INFO] Processing SRX7779357. (1/16)
2021-08-23 11:28:01 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-23 11:28:04 [INFO] Processing SRX7779351. (2/16)
2021-08-23 11:28:04 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-23 11:28:09 [INFO] Processing SRX7779348. (3/16)
2021-08-23 11:28:09 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-23 11:28:15 [INFO] Processing SRX7779356. (4/16)
2021-08-23 11:28:15 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-23 11:28:19 [INFO] Processing SRX7779359. (5/16)
2021-08-23 11:28:19 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-23 11:28:26 [INFO] Processing SRX7779349. (6/16)
2021-08-23 11:28:26 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-23 11:28:30 [INFO] Processing SRX7779350. (7/16)
2021-08-23 11:28:30 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-23 11:28:34 [INFO] Processing SRX7779345. (8/16)
2021-08-23 11:28:34 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-23 11:28:42 [INFO] Processing SRX7779347. (9/16)
2021-08-23 11:28:42 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-23 11:28:51 [INFO] Processing SRX7779354. (10/16)
2021-08-23 11:28:51 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-23 11:28:58 [INFO] Writing to disk...
2021-08-23 11:28:59 [INFO] Processing SRX7779352. (11/16)
2021-08-23 11:28:59 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-23 11:29:06 [INFO] Processing SRX7779358. (12/16)
2021-08-23 11:29:06 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-23 11:29:13 [INFO] Processing SRX7779355. (13/16)
2021-08-23 11:29:13 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-23 11:29:20 [INFO] Processing SRX7779346. (14/16)
2021-08-23 11:29:20 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-23 11:29:29 [INFO] Processing SRX7779344. (15/16)
2021-08-23 11:29:29 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-23 11:29:37 [INFO] Processing SRX7779353. (16/16)
2021-08-23 11:29:37 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-23 11:29:43 [INFO] Writing to disk...
2021-08-23 11:29:54 [INFO] Finished.
2021-08-23 13:15:16 [INFO] Starting.
2021-08-23 13:15:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/
2021-08-23 13:15:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250333/aggregate.hdf5
2021-08-23 13:15:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:15:17 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:15:17 [INFO] Writing every 10 Runs.
2021-08-23 13:15:17 [INFO] Processing SRX7779357. (1/16)
2021-08-23 13:15:17 [INFO] Processing SRX7779357-SRR11142944. (1/16)
2021-08-23 13:15:19 [INFO] Processing SRX7779351. (2/16)
2021-08-23 13:15:19 [INFO] Processing SRX7779351-SRR11142938. (2/16)
2021-08-23 13:15:22 [INFO] Processing SRX7779348. (3/16)
2021-08-23 13:15:22 [INFO] Processing SRX7779348-SRR11142935. (3/16)
2021-08-23 13:15:26 [INFO] Processing SRX7779356. (4/16)
2021-08-23 13:15:26 [INFO] Processing SRX7779356-SRR11142943. (4/16)
2021-08-23 13:15:28 [INFO] Processing SRX7779359. (5/16)
2021-08-23 13:15:28 [INFO] Processing SRX7779359-SRR11142946. (5/16)
2021-08-23 13:15:33 [INFO] Processing SRX7779349. (6/16)
2021-08-23 13:15:33 [INFO] Processing SRX7779349-SRR11142936. (6/16)
2021-08-23 13:15:36 [INFO] Processing SRX7779350. (7/16)
2021-08-23 13:15:36 [INFO] Processing SRX7779350-SRR11142937. (7/16)
2021-08-23 13:15:39 [INFO] Processing SRX7779345. (8/16)
2021-08-23 13:15:39 [INFO] Processing SRX7779345-SRR11142932. (8/16)
2021-08-23 13:15:44 [INFO] Processing SRX7779347. (9/16)
2021-08-23 13:15:44 [INFO] Processing SRX7779347-SRR11142934. (9/16)
2021-08-23 13:15:50 [INFO] Processing SRX7779354. (10/16)
2021-08-23 13:15:50 [INFO] Processing SRX7779354-SRR11142941. (10/16)
2021-08-23 13:15:54 [INFO] Writing to disk...
2021-08-23 13:15:55 [INFO] Processing SRX7779352. (11/16)
2021-08-23 13:15:55 [INFO] Processing SRX7779352-SRR11142939. (11/16)
2021-08-23 13:16:00 [INFO] Processing SRX7779358. (12/16)
2021-08-23 13:16:00 [INFO] Processing SRX7779358-SRR11142945. (12/16)
2021-08-23 13:16:05 [INFO] Processing SRX7779355. (13/16)
2021-08-23 13:16:05 [INFO] Processing SRX7779355-SRR11142942. (13/16)
2021-08-23 13:16:09 [INFO] Processing SRX7779346. (14/16)
2021-08-23 13:16:09 [INFO] Processing SRX7779346-SRR11142933. (14/16)
2021-08-23 13:16:15 [INFO] Processing SRX7779344. (15/16)
2021-08-23 13:16:15 [INFO] Processing SRX7779344-SRR11142931. (15/16)
2021-08-23 13:16:20 [INFO] Processing SRX7779353. (16/16)
2021-08-23 13:16:20 [INFO] Processing SRX7779353-SRR11142940. (16/16)
2021-08-23 13:16:25 [INFO] Writing to disk...
2021-08-23 13:16:26 [INFO] Finished.