2021-06-10 03:36:04 [INFO] Starting.
2021-06-10 03:36:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-06-10 03:36:04 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-06-10 03:36:04 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:36:04 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:36:05 [INFO] Building aggregate.
2021-06-10 03:36:05 [INFO] Writing every 10 Runs.
2021-06-10 03:36:05 [INFO] Processing SRX7785306. (1/8)
2021-06-10 03:36:05 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-06-10 03:36:41 [INFO] Processing SRX7785301. (2/8)
2021-06-10 03:36:41 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-06-10 03:37:42 [INFO] Processing SRX7785304. (3/8)
2021-06-10 03:37:42 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-06-10 03:38:24 [INFO] Processing SRX7785303. (4/8)
2021-06-10 03:38:24 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-06-10 03:39:27 [INFO] Processing SRX7785302. (5/8)
2021-06-10 03:39:27 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-06-10 03:40:15 [INFO] Processing SRX7785300. (6/8)
2021-06-10 03:40:15 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-06-10 03:40:52 [INFO] Processing SRX7785305. (7/8)
2021-06-10 03:40:52 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-06-10 03:41:43 [INFO] Processing SRX7785299. (8/8)
2021-06-10 03:41:43 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-06-10 03:42:51 [INFO] Writing to disk...
2021-06-10 03:43:21 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX7785306. (1/8)
2021-08-02 17:08:56 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-02 17:33:33 [INFO] Processing SRX7785301. (2/8)
2021-08-02 17:33:33 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-02 17:44:42 [INFO] Processing SRX7785304. (3/8)
2021-08-02 17:44:42 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-02 17:52:29 [INFO] Processing SRX7785303. (4/8)
2021-08-02 17:52:29 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-02 18:00:51 [INFO] Processing SRX7785302. (5/8)
2021-08-02 18:00:51 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-02 18:10:11 [INFO] Processing SRX7785300. (6/8)
2021-08-02 18:10:11 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-02 18:18:08 [INFO] Processing SRX7785305. (7/8)
2021-08-02 18:18:08 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-02 18:26:23 [INFO] Processing SRX7785299. (8/8)
2021-08-02 18:26:23 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-02 18:34:58 [INFO] Writing to disk...
2021-08-02 18:37:03 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX7785306. (1/8)
2021-08-12 14:31:18 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-12 14:31:55 [INFO] Processing SRX7785301. (2/8)
2021-08-12 14:31:55 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-12 14:32:56 [INFO] Processing SRX7785304. (3/8)
2021-08-12 14:32:56 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-12 14:33:43 [INFO] Processing SRX7785303. (4/8)
2021-08-12 14:33:43 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-12 14:34:52 [INFO] Processing SRX7785302. (5/8)
2021-08-12 14:34:52 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-12 14:35:39 [INFO] Processing SRX7785300. (6/8)
2021-08-12 14:35:39 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-12 14:36:25 [INFO] Processing SRX7785305. (7/8)
2021-08-12 14:36:25 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-12 14:37:19 [INFO] Processing SRX7785299. (8/8)
2021-08-12 14:37:19 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-12 14:38:21 [INFO] Writing to disk...
2021-08-12 14:38:46 [INFO] Finished.
2021-08-12 15:09:40 [INFO] Starting.
2021-08-12 15:09:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-12 15:09:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-12 15:09:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:41 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:41 [INFO] Writing every 10 Runs.
2021-08-12 15:09:41 [INFO] Processing SRX7785306. (1/8)
2021-08-12 15:09:41 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-12 15:10:16 [INFO] Processing SRX7785301. (2/8)
2021-08-12 15:10:16 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-12 15:11:04 [INFO] Processing SRX7785304. (3/8)
2021-08-12 15:11:04 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-12 15:11:37 [INFO] Processing SRX7785303. (4/8)
2021-08-12 15:11:37 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-12 15:12:38 [INFO] Processing SRX7785302. (5/8)
2021-08-12 15:12:38 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-12 15:13:22 [INFO] Processing SRX7785300. (6/8)
2021-08-12 15:13:22 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-12 15:14:02 [INFO] Processing SRX7785305. (7/8)
2021-08-12 15:14:02 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-12 15:14:54 [INFO] Processing SRX7785299. (8/8)
2021-08-12 15:14:54 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-12 15:15:54 [INFO] Writing to disk...
2021-08-12 15:16:17 [INFO] Finished.
2021-08-12 15:44:39 [INFO] Starting.
2021-08-12 15:44:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-12 15:44:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-12 15:44:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:40 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:40 [INFO] Writing every 10 Runs.
2021-08-12 15:44:40 [INFO] Processing SRX7785306. (1/8)
2021-08-12 15:44:40 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-12 15:45:19 [INFO] Processing SRX7785301. (2/8)
2021-08-12 15:45:19 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-12 15:46:23 [INFO] Processing SRX7785304. (3/8)
2021-08-12 15:46:23 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-12 15:47:17 [INFO] Processing SRX7785303. (4/8)
2021-08-12 15:47:17 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-12 15:48:39 [INFO] Processing SRX7785302. (5/8)
2021-08-12 15:48:39 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-12 15:49:39 [INFO] Processing SRX7785300. (6/8)
2021-08-12 15:49:39 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-12 15:50:36 [INFO] Processing SRX7785305. (7/8)
2021-08-12 15:50:36 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-12 15:51:50 [INFO] Processing SRX7785299. (8/8)
2021-08-12 15:51:50 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-12 15:53:04 [INFO] Writing to disk...
2021-08-12 15:53:39 [INFO] Finished.
2021-08-12 16:31:34 [INFO] Starting.
2021-08-12 16:31:34 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-12 16:31:34 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-12 16:31:34 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:31:35 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:31:35 [INFO] Writing every 10 Runs.
2021-08-12 16:31:35 [INFO] Processing SRX7785306. (1/8)
2021-08-12 16:31:35 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-12 16:32:17 [INFO] Processing SRX7785301. (2/8)
2021-08-12 16:32:17 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-12 16:33:14 [INFO] Processing SRX7785304. (3/8)
2021-08-12 16:33:14 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-12 16:34:07 [INFO] Processing SRX7785303. (4/8)
2021-08-12 16:34:07 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-12 16:35:20 [INFO] Processing SRX7785302. (5/8)
2021-08-12 16:35:20 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-12 16:36:27 [INFO] Processing SRX7785300. (6/8)
2021-08-12 16:36:27 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-12 16:37:41 [INFO] Processing SRX7785305. (7/8)
2021-08-12 16:37:41 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-12 16:39:00 [INFO] Processing SRX7785299. (8/8)
2021-08-12 16:39:00 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-12 16:40:20 [INFO] Writing to disk...
2021-08-12 16:41:19 [INFO] Finished.
2021-08-20 17:56:40 [INFO] Starting.
2021-08-20 17:56:40 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-20 17:56:40 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-20 17:56:40 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:56:41 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:56:41 [INFO] Writing every 10 Runs.
2021-08-20 17:56:41 [INFO] Processing SRX7785306. (1/8)
2021-08-20 17:56:41 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-20 17:57:16 [INFO] Processing SRX7785301. (2/8)
2021-08-20 17:57:16 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-20 17:58:00 [INFO] Processing SRX7785304. (3/8)
2021-08-20 17:58:00 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-20 17:58:37 [INFO] Processing SRX7785303. (4/8)
2021-08-20 17:58:37 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-20 17:59:28 [INFO] Processing SRX7785302. (5/8)
2021-08-20 17:59:28 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-20 18:00:09 [INFO] Processing SRX7785300. (6/8)
2021-08-20 18:00:09 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-20 18:02:02 [INFO] Processing SRX7785305. (7/8)
2021-08-20 18:02:02 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-20 18:03:46 [INFO] Processing SRX7785299. (8/8)
2021-08-20 18:03:46 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-20 18:04:35 [INFO] Writing to disk...
2021-08-20 18:04:51 [INFO] Finished.
2021-08-23 11:28:38 [INFO] Starting.
2021-08-23 11:28:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-23 11:28:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-23 11:28:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:28:39 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:28:39 [INFO] Writing every 10 Runs.
2021-08-23 11:28:39 [INFO] Processing SRX7785306. (1/8)
2021-08-23 11:28:39 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-23 11:28:54 [INFO] Processing SRX7785301. (2/8)
2021-08-23 11:28:54 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-23 11:29:14 [INFO] Processing SRX7785304. (3/8)
2021-08-23 11:29:14 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-23 11:29:29 [INFO] Processing SRX7785303. (4/8)
2021-08-23 11:29:29 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-23 11:29:53 [INFO] Processing SRX7785302. (5/8)
2021-08-23 11:29:53 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-23 11:30:10 [INFO] Processing SRX7785300. (6/8)
2021-08-23 11:30:10 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-23 11:30:28 [INFO] Processing SRX7785305. (7/8)
2021-08-23 11:30:28 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-23 11:30:45 [INFO] Processing SRX7785299. (8/8)
2021-08-23 11:30:45 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-23 11:31:07 [INFO] Writing to disk...
2021-08-23 11:31:10 [INFO] Finished.
2021-08-23 13:16:08 [INFO] Starting.
2021-08-23 13:16:08 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/
2021-08-23 13:16:08 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP250432/aggregate.hdf5
2021-08-23 13:16:08 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:09 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:09 [INFO] Writing every 10 Runs.
2021-08-23 13:16:09 [INFO] Processing SRX7785306. (1/8)
2021-08-23 13:16:09 [INFO] Processing SRX7785306-SRR11149250. (1/8)
2021-08-23 13:16:17 [INFO] Processing SRX7785301. (2/8)
2021-08-23 13:16:17 [INFO] Processing SRX7785301-SRR11149245. (2/8)
2021-08-23 13:16:24 [INFO] Processing SRX7785304. (3/8)
2021-08-23 13:16:24 [INFO] Processing SRX7785304-SRR11149248. (3/8)
2021-08-23 13:16:32 [INFO] Processing SRX7785303. (4/8)
2021-08-23 13:16:32 [INFO] Processing SRX7785303-SRR11149247. (4/8)
2021-08-23 13:16:41 [INFO] Processing SRX7785302. (5/8)
2021-08-23 13:16:41 [INFO] Processing SRX7785302-SRR11149246. (5/8)
2021-08-23 13:16:51 [INFO] Processing SRX7785300. (6/8)
2021-08-23 13:16:51 [INFO] Processing SRX7785300-SRR11149244. (6/8)
2021-08-23 13:16:57 [INFO] Processing SRX7785305. (7/8)
2021-08-23 13:16:57 [INFO] Processing SRX7785305-SRR11149249. (7/8)
2021-08-23 13:17:04 [INFO] Processing SRX7785299. (8/8)
2021-08-23 13:17:04 [INFO] Processing SRX7785299-SRR11149243. (8/8)
2021-08-23 13:17:10 [INFO] Writing to disk...
2021-08-23 13:17:11 [INFO] Finished.