2021-06-10 03:59:56 [INFO] Starting.
2021-06-10 03:59:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-06-10 03:59:56 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-06-10 03:59:56 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 03:59:56 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 03:59:57 [INFO] Building aggregate.
2021-06-10 03:59:57 [INFO] Writing every 10 Runs.
2021-06-10 03:59:57 [INFO] Processing SRX8699716. (1/3)
2021-06-10 03:59:57 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-06-10 04:00:37 [INFO] Processing SRX8699717. (2/3)
2021-06-10 04:00:37 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-06-10 04:01:08 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-06-10 04:01:42 [INFO] Processing SRX8699718. (3/3)
2021-06-10 04:01:42 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-06-10 04:02:00 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-06-10 04:02:32 [INFO] Writing to disk...
2021-06-10 04:02:45 [INFO] Finished.
2021-08-02 17:08:56 [INFO] Starting.
2021-08-02 17:08:56 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-02 17:08:56 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-02 17:08:56 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX8699716. (1/3)
2021-08-02 17:08:56 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-02 17:15:28 [INFO] Processing SRX8699717. (2/3)
2021-08-02 17:15:28 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-02 17:28:05 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-02 17:36:47 [INFO] Processing SRX8699718. (3/3)
2021-08-02 17:36:47 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-02 17:45:16 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-02 17:53:53 [INFO] Writing to disk...
2021-08-02 17:55:28 [INFO] Finished.
2021-08-12 14:31:17 [INFO] Starting.
2021-08-12 14:31:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-12 14:31:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-12 14:31:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:18 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:18 [INFO] Writing every 10 Runs.
2021-08-12 14:31:18 [INFO] Processing SRX8699716. (1/3)
2021-08-12 14:31:18 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-12 14:32:01 [INFO] Processing SRX8699717. (2/3)
2021-08-12 14:32:01 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-12 14:32:40 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-12 14:33:33 [INFO] Processing SRX8699718. (3/3)
2021-08-12 14:33:33 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-12 14:33:53 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-12 14:34:13 [INFO] Writing to disk...
2021-08-12 14:34:32 [INFO] Finished.
2021-08-12 15:09:39 [INFO] Starting.
2021-08-12 15:09:39 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-12 15:09:39 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-12 15:09:39 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:09:40 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:09:40 [INFO] Writing every 10 Runs.
2021-08-12 15:09:40 [INFO] Processing SRX8699716. (1/3)
2021-08-12 15:09:40 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-12 15:10:23 [INFO] Processing SRX8699717. (2/3)
2021-08-12 15:10:23 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-12 15:10:53 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-12 15:11:33 [INFO] Processing SRX8699718. (3/3)
2021-08-12 15:11:33 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-12 15:11:50 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-12 15:12:10 [INFO] Writing to disk...
2021-08-12 15:12:27 [INFO] Finished.
2021-08-12 15:44:38 [INFO] Starting.
2021-08-12 15:44:38 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-12 15:44:38 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-12 15:44:38 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:44:38 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:44:38 [INFO] Writing every 10 Runs.
2021-08-12 15:44:38 [INFO] Processing SRX8699716. (1/3)
2021-08-12 15:44:38 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-12 15:45:23 [INFO] Processing SRX8699717. (2/3)
2021-08-12 15:45:23 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-12 15:45:55 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-12 15:46:36 [INFO] Processing SRX8699718. (3/3)
2021-08-12 15:46:36 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-12 15:46:54 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-12 15:47:15 [INFO] Writing to disk...
2021-08-12 15:47:32 [INFO] Finished.
2021-08-12 16:32:36 [INFO] Starting.
2021-08-12 16:32:36 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-12 16:32:36 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-12 16:32:36 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:32:37 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:32:37 [INFO] Writing every 10 Runs.
2021-08-12 16:32:37 [INFO] Processing SRX8699716. (1/3)
2021-08-12 16:32:37 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-12 16:33:31 [INFO] Processing SRX8699717. (2/3)
2021-08-12 16:33:31 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-12 16:34:11 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-12 16:35:05 [INFO] Processing SRX8699718. (3/3)
2021-08-12 16:35:05 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-12 16:35:34 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-12 16:36:11 [INFO] Writing to disk...
2021-08-12 16:36:35 [INFO] Finished.
2021-08-20 17:59:03 [INFO] Starting.
2021-08-20 17:59:03 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-20 17:59:03 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-20 17:59:03 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 17:59:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 17:59:04 [INFO] Writing every 10 Runs.
2021-08-20 17:59:04 [INFO] Processing SRX8699716. (1/3)
2021-08-20 17:59:04 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-20 17:59:34 [INFO] Processing SRX8699717. (2/3)
2021-08-20 17:59:34 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-20 17:59:58 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-20 18:01:45 [INFO] Processing SRX8699718. (3/3)
2021-08-20 18:01:45 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-20 18:02:32 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-20 18:02:48 [INFO] Writing to disk...
2021-08-20 18:03:41 [INFO] Finished.
2021-08-23 11:30:15 [INFO] Starting.
2021-08-23 11:30:15 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-23 11:30:15 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-23 11:30:15 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:30:16 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:30:16 [INFO] Writing every 10 Runs.
2021-08-23 11:30:16 [INFO] Processing SRX8699716. (1/3)
2021-08-23 11:30:16 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-23 11:30:35 [INFO] Processing SRX8699717. (2/3)
2021-08-23 11:30:35 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-23 11:30:52 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-23 11:31:14 [INFO] Processing SRX8699718. (3/3)
2021-08-23 11:31:14 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-23 11:31:24 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-23 11:31:34 [INFO] Writing to disk...
2021-08-23 11:31:35 [INFO] Finished.
2021-08-23 13:16:51 [INFO] Starting.
2021-08-23 13:16:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/
2021-08-23 13:16:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP271101/aggregate.hdf5
2021-08-23 13:16:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:16:51 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:16:51 [INFO] Writing every 10 Runs.
2021-08-23 13:16:51 [INFO] Processing SRX8699716. (1/3)
2021-08-23 13:16:51 [INFO] Processing SRX8699716-SRR12185168. (1/5)
2021-08-23 13:17:00 [INFO] Processing SRX8699717. (2/3)
2021-08-23 13:17:00 [INFO] Processing SRX8699717-SRR12185169. (2/5)
2021-08-23 13:17:08 [INFO] Processing SRX8699717-SRR12185170. (3/5)
2021-08-23 13:17:17 [INFO] Processing SRX8699718. (3/3)
2021-08-23 13:17:17 [INFO] Processing SRX8699718-SRR12185172. (4/5)
2021-08-23 13:17:22 [INFO] Processing SRX8699718-SRR12185171. (5/5)
2021-08-23 13:17:29 [INFO] Writing to disk...
2021-08-23 13:17:30 [INFO] Finished.