2021-06-10 04:12:26 [INFO] Starting.
2021-06-10 04:12:26 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-06-10 04:12:26 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-06-10 04:12:26 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes
2021-06-10 04:12:26 [INFO] Using only main chromosomes: chr1, chr2, chr3, chr4, chr5, chr6, chr7, chrX, chr8, chr9, chr11, chr10, chr12, chr13, chr14, chr15, chr16, chr17, chr18, chr20, chr19, chrY, chr22, chr21, chrM
2021-06-10 04:12:27 [INFO] Building aggregate.
2021-06-10 04:12:27 [INFO] Writing every 10 Runs.
2021-06-10 04:12:27 [INFO] Processing SRX8844376. (1/3)
2021-06-10 04:12:27 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-06-10 04:12:48 [INFO] Processing SRX8844377. (2/3)
2021-06-10 04:12:48 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-06-10 04:13:17 [INFO] Processing SRX8844378. (3/3)
2021-06-10 04:13:17 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-06-10 04:13:34 [INFO] Writing to disk...
2021-06-10 04:13:39 [INFO] Finished.
2021-08-02 17:08:55 [INFO] Starting.
2021-08-02 17:08:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-02 17:08:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-02 17:08:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-02 17:08:56 [INFO] Building aggregate for 1bp_raw network.
2021-08-02 17:08:56 [INFO] Writing every 10 Runs.
2021-08-02 17:08:56 [INFO] Processing SRX8844376. (1/3)
2021-08-02 17:08:56 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-02 17:34:32 [INFO] Processing SRX8844377. (2/3)
2021-08-02 17:34:32 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-02 17:47:46 [INFO] Processing SRX8844378. (3/3)
2021-08-02 17:47:46 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-02 17:54:38 [INFO] Writing to disk...
2021-08-02 17:55:35 [INFO] Finished.
2021-08-12 14:33:13 [INFO] Starting.
2021-08-12 14:33:13 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-12 14:33:13 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-12 14:33:13 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:33:14 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:33:14 [INFO] Writing every 10 Runs.
2021-08-12 14:33:14 [INFO] Processing SRX8844376. (1/3)
2021-08-12 14:33:14 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-12 14:33:37 [INFO] Processing SRX8844377. (2/3)
2021-08-12 14:33:37 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-12 14:33:59 [INFO] Processing SRX8844378. (3/3)
2021-08-12 14:33:59 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-12 14:34:27 [INFO] Writing to disk...
2021-08-12 14:34:32 [INFO] Finished.
2021-08-12 15:11:49 [INFO] Starting.
2021-08-12 15:11:49 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-12 15:11:49 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-12 15:11:49 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:11:50 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 15:11:50 [INFO] Writing every 10 Runs.
2021-08-12 15:11:50 [INFO] Processing SRX8844376. (1/3)
2021-08-12 15:11:50 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-12 15:12:12 [INFO] Processing SRX8844377. (2/3)
2021-08-12 15:12:12 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-12 15:12:33 [INFO] Processing SRX8844378. (3/3)
2021-08-12 15:12:33 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-12 15:12:56 [INFO] Writing to disk...
2021-08-12 15:13:01 [INFO] Finished.
2021-08-12 15:46:29 [INFO] Starting.
2021-08-12 15:46:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-12 15:46:29 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-12 15:46:29 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 15:46:30 [INFO] Building aggregate for 5kbp_raw network.
2021-08-12 15:46:30 [INFO] Writing every 10 Runs.
2021-08-12 15:46:30 [INFO] Processing SRX8844376. (1/3)
2021-08-12 15:46:30 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-12 15:46:51 [INFO] Processing SRX8844377. (2/3)
2021-08-12 15:46:51 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-12 15:47:13 [INFO] Processing SRX8844378. (3/3)
2021-08-12 15:47:13 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-12 15:47:39 [INFO] Writing to disk...
2021-08-12 15:47:46 [INFO] Finished.
2021-08-12 16:35:24 [INFO] Starting.
2021-08-12 16:35:24 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-12 16:35:24 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-12 16:35:24 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:35:25 [INFO] Building aggregate for 1kbp_raw network.
2021-08-12 16:35:25 [INFO] Writing every 10 Runs.
2021-08-12 16:35:25 [INFO] Processing SRX8844376. (1/3)
2021-08-12 16:35:25 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-12 16:35:57 [INFO] Processing SRX8844377. (2/3)
2021-08-12 16:35:57 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-12 16:36:29 [INFO] Processing SRX8844378. (3/3)
2021-08-12 16:36:29 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-12 16:37:08 [INFO] Writing to disk...
2021-08-12 16:37:19 [INFO] Finished.
2021-08-20 18:02:34 [INFO] Starting.
2021-08-20 18:02:35 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-20 18:02:35 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-20 18:02:35 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-20 18:02:35 [INFO] Building aggregate for 100kbp_raw network.
2021-08-20 18:02:35 [INFO] Writing every 10 Runs.
2021-08-20 18:02:35 [INFO] Processing SRX8844376. (1/3)
2021-08-20 18:02:35 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-20 18:02:53 [INFO] Processing SRX8844377. (2/3)
2021-08-20 18:02:53 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-20 18:04:05 [INFO] Processing SRX8844378. (3/3)
2021-08-20 18:04:05 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-20 18:04:21 [INFO] Writing to disk...
2021-08-20 18:04:24 [INFO] Finished.
2021-08-23 11:31:05 [INFO] Starting.
2021-08-23 11:31:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-23 11:31:05 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-23 11:31:05 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 11:31:06 [INFO] Building aggregate for 250kbp_raw network.
2021-08-23 11:31:06 [INFO] Writing every 10 Runs.
2021-08-23 11:31:06 [INFO] Processing SRX8844376. (1/3)
2021-08-23 11:31:06 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-23 11:31:18 [INFO] Processing SRX8844377. (2/3)
2021-08-23 11:31:18 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-23 11:31:30 [INFO] Processing SRX8844378. (3/3)
2021-08-23 11:31:30 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-23 11:31:43 [INFO] Writing to disk...
2021-08-23 11:31:44 [INFO] Finished.
2021-08-23 13:17:13 [INFO] Starting.
2021-08-23 13:17:13 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/
2021-08-23 13:17:13 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_human/SRP274139/aggregate.hdf5
2021-08-23 13:17:13 [WARNING] chroms=/grid/gillis/data/nfox/genomes/homo_sapiens_38/hg38.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:17:13 [INFO] Building aggregate for 500kbp_raw network.
2021-08-23 13:17:13 [INFO] Writing every 10 Runs.
2021-08-23 13:17:13 [INFO] Processing SRX8844376. (1/3)
2021-08-23 13:17:13 [INFO] Processing SRX8844376-SRR12344686. (1/3)
2021-08-23 13:17:19 [INFO] Processing SRX8844377. (2/3)
2021-08-23 13:17:19 [INFO] Processing SRX8844377-SRR12344687. (2/3)
2021-08-23 13:17:26 [INFO] Processing SRX8844378. (3/3)
2021-08-23 13:17:26 [INFO] Processing SRX8844378-SRR12344688. (3/3)
2021-08-23 13:17:33 [INFO] Writing to disk...
2021-08-23 13:17:34 [INFO] Finished.