2021-08-02 14:43:30 [INFO] Starting.
2021-08-02 14:43:30 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-02 14:43:30 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-02 14:43:30 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:30 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX4024408. (1/22)
2021-08-02 14:43:30 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-02 14:43:37 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-02 14:43:43 [INFO] Processing SRX4024409. (2/22)
2021-08-02 14:43:43 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-02 14:43:49 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-02 14:43:56 [INFO] Processing SRX4024411. (3/22)
2021-08-02 14:43:56 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-02 14:44:00 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-02 14:44:04 [INFO] Processing SRX4024402. (4/22)
2021-08-02 14:44:04 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-02 14:44:09 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-02 14:44:15 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-02 14:44:18 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-02 14:44:22 [INFO] Writing to disk...
2021-08-02 14:44:24 [INFO] Processing SRX4024404. (5/22)
2021-08-02 14:44:24 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-02 14:44:28 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-02 14:44:32 [INFO] Processing SRX4024418. (6/22)
2021-08-02 14:44:32 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-02 14:44:36 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-02 14:44:42 [INFO] Processing SRX4024417. (7/22)
2021-08-02 14:44:42 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-02 14:44:48 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-02 14:44:56 [INFO] Processing SRX4024406. (8/22)
2021-08-02 14:44:56 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-02 14:45:01 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-02 14:45:06 [INFO] Processing SRX4024421. (9/22)
2021-08-02 14:45:06 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-02 14:45:11 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-02 14:45:16 [INFO] Writing to disk...
2021-08-02 14:45:18 [INFO] Processing SRX4024413. (10/22)
2021-08-02 14:45:18 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-02 14:45:23 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-02 14:45:28 [INFO] Processing SRX4024419. (11/22)
2021-08-02 14:45:28 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-02 14:45:32 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-02 14:45:37 [INFO] Processing SRX4024407. (12/22)
2021-08-02 14:45:37 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-02 14:45:43 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-02 14:45:48 [INFO] Processing SRX4024414. (13/22)
2021-08-02 14:45:48 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-02 14:45:53 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-02 14:45:59 [INFO] Processing SRX4024400. (14/22)
2021-08-02 14:45:59 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-02 14:46:05 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-02 14:46:08 [INFO] Writing to disk...
2021-08-02 14:46:11 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-02 14:46:18 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-02 14:46:21 [INFO] Processing SRX4024420. (15/22)
2021-08-02 14:46:21 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-02 14:46:26 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-02 14:46:31 [INFO] Processing SRX4024416. (16/22)
2021-08-02 14:46:31 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-02 14:46:38 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-02 14:46:44 [INFO] Processing SRX4024403. (17/22)
2021-08-02 14:46:44 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-02 14:46:48 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-02 14:46:57 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-02 14:47:00 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-02 14:47:08 [INFO] Writing to disk...
2021-08-02 14:47:14 [INFO] Processing SRX4024415. (18/22)
2021-08-02 14:47:14 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-02 14:47:20 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-02 14:47:26 [INFO] Processing SRX4024410. (19/22)
2021-08-02 14:47:26 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-02 14:47:31 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-02 14:47:37 [INFO] Processing SRX4024401. (20/22)
2021-08-02 14:47:37 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-02 14:47:44 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-02 14:47:52 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-02 14:47:55 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-02 14:47:59 [INFO] Processing SRX4024405. (21/22)
2021-08-02 14:47:59 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-02 14:48:04 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-02 14:48:09 [INFO] Writing to disk...
2021-08-02 14:48:14 [INFO] Processing SRX4024412. (22/22)
2021-08-02 14:48:14 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-02 14:48:19 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-02 14:48:23 [INFO] Writing to disk...
2021-08-02 14:48:27 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX4024408. (1/22)
2021-08-12 14:31:21 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-12 14:31:28 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-12 14:31:33 [INFO] Processing SRX4024409. (2/22)
2021-08-12 14:31:33 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-12 14:31:40 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-12 14:31:47 [INFO] Processing SRX4024411. (3/22)
2021-08-12 14:31:47 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-12 14:31:51 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-12 14:31:54 [INFO] Processing SRX4024402. (4/22)
2021-08-12 14:31:54 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-12 14:32:00 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-12 14:32:07 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-12 14:32:10 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-12 14:32:13 [INFO] Writing to disk...
2021-08-12 14:32:16 [INFO] Processing SRX4024404. (5/22)
2021-08-12 14:32:16 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-12 14:32:19 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-12 14:32:24 [INFO] Processing SRX4024418. (6/22)
2021-08-12 14:32:24 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-12 14:32:29 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-12 14:32:34 [INFO] Processing SRX4024417. (7/22)
2021-08-12 14:32:34 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-12 14:32:41 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-12 14:32:46 [INFO] Processing SRX4024406. (8/22)
2021-08-12 14:32:46 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-12 14:32:50 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-12 14:32:55 [INFO] Processing SRX4024421. (9/22)
2021-08-12 14:32:55 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-12 14:32:59 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-12 14:33:03 [INFO] Writing to disk...
2021-08-12 14:33:13 [INFO] Processing SRX4024413. (10/22)
2021-08-12 14:33:13 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-12 14:33:18 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-12 14:33:23 [INFO] Processing SRX4024419. (11/22)
2021-08-12 14:33:23 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-12 14:33:28 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-12 14:33:33 [INFO] Processing SRX4024407. (12/22)
2021-08-12 14:33:33 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-12 14:33:40 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-12 14:33:46 [INFO] Processing SRX4024414. (13/22)
2021-08-12 14:33:46 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-12 14:33:51 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-12 14:33:56 [INFO] Processing SRX4024400. (14/22)
2021-08-12 14:33:56 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-12 14:34:03 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-12 14:34:06 [INFO] Writing to disk...
2021-08-12 14:34:18 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-12 14:34:26 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-12 14:34:29 [INFO] Processing SRX4024420. (15/22)
2021-08-12 14:34:29 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-12 14:34:34 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-12 14:34:39 [INFO] Processing SRX4024416. (16/22)
2021-08-12 14:34:39 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-12 14:34:46 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-12 14:34:51 [INFO] Processing SRX4024403. (17/22)
2021-08-12 14:34:51 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-12 14:34:55 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-12 14:35:03 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-12 14:35:07 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-12 14:35:16 [INFO] Writing to disk...
2021-08-12 14:35:31 [INFO] Processing SRX4024415. (18/22)
2021-08-12 14:35:31 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-12 14:35:37 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-12 14:35:43 [INFO] Processing SRX4024410. (19/22)
2021-08-12 14:35:43 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-12 14:35:49 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-12 14:35:55 [INFO] Processing SRX4024401. (20/22)
2021-08-12 14:35:55 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-12 14:36:03 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-12 14:36:12 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-12 14:36:16 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-12 14:36:19 [INFO] Processing SRX4024405. (21/22)
2021-08-12 14:36:19 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-12 14:36:25 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-12 14:36:31 [INFO] Writing to disk...
2021-08-12 14:36:46 [INFO] Processing SRX4024412. (22/22)
2021-08-12 14:36:46 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-12 14:36:50 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-12 14:36:54 [INFO] Writing to disk...
2021-08-12 14:36:59 [INFO] Finished.
2021-08-12 16:34:17 [INFO] Starting.
2021-08-12 16:34:17 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-12 16:34:17 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-12 16:34:17 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:17 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:17 [INFO] Writing every 10 Runs.
2021-08-12 16:34:17 [INFO] Processing SRX4024408. (1/22)
2021-08-12 16:34:17 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-12 16:34:23 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-12 16:34:29 [INFO] Processing SRX4024409. (2/22)
2021-08-12 16:34:29 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-12 16:34:35 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-12 16:34:43 [INFO] Processing SRX4024411. (3/22)
2021-08-12 16:34:43 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-12 16:34:47 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-12 16:34:52 [INFO] Processing SRX4024402. (4/22)
2021-08-12 16:34:52 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-12 16:34:58 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-12 16:35:04 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-12 16:35:07 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-12 16:35:12 [INFO] Writing to disk...
2021-08-12 16:35:15 [INFO] Processing SRX4024404. (5/22)
2021-08-12 16:35:15 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-12 16:35:20 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-12 16:35:24 [INFO] Processing SRX4024418. (6/22)
2021-08-12 16:35:24 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-12 16:35:30 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-12 16:35:35 [INFO] Processing SRX4024417. (7/22)
2021-08-12 16:35:35 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-12 16:35:43 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-12 16:35:52 [INFO] Processing SRX4024406. (8/22)
2021-08-12 16:35:52 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-12 16:35:58 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-12 16:36:04 [INFO] Processing SRX4024421. (9/22)
2021-08-12 16:36:04 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-12 16:36:10 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-12 16:36:16 [INFO] Writing to disk...
2021-08-12 16:36:26 [INFO] Processing SRX4024413. (10/22)
2021-08-12 16:36:26 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-12 16:36:32 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-12 16:36:38 [INFO] Processing SRX4024419. (11/22)
2021-08-12 16:36:38 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-12 16:36:44 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-12 16:36:50 [INFO] Processing SRX4024407. (12/22)
2021-08-12 16:36:50 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-12 16:36:56 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-12 16:37:04 [INFO] Processing SRX4024414. (13/22)
2021-08-12 16:37:04 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-12 16:37:09 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-12 16:37:14 [INFO] Processing SRX4024400. (14/22)
2021-08-12 16:37:14 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-12 16:37:23 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-12 16:37:28 [INFO] Writing to disk...
2021-08-12 16:37:45 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-12 16:37:54 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-12 16:37:59 [INFO] Processing SRX4024420. (15/22)
2021-08-12 16:37:59 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-12 16:38:05 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-12 16:38:10 [INFO] Processing SRX4024416. (16/22)
2021-08-12 16:38:10 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-12 16:38:17 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-12 16:38:25 [INFO] Processing SRX4024403. (17/22)
2021-08-12 16:38:25 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-12 16:38:29 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-12 16:38:38 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-12 16:38:43 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-12 16:38:53 [INFO] Writing to disk...
2021-08-12 16:39:07 [INFO] Processing SRX4024415. (18/22)
2021-08-12 16:39:07 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-12 16:39:13 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-12 16:39:19 [INFO] Processing SRX4024410. (19/22)
2021-08-12 16:39:19 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-12 16:39:26 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-12 16:39:32 [INFO] Processing SRX4024401. (20/22)
2021-08-12 16:39:32 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-12 16:39:39 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-12 16:39:48 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-12 16:39:52 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-12 16:39:55 [INFO] Processing SRX4024405. (21/22)
2021-08-12 16:39:55 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-12 16:40:02 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-12 16:40:07 [INFO] Writing to disk...
2021-08-12 16:40:14 [INFO] Processing SRX4024412. (22/22)
2021-08-12 16:40:14 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-12 16:40:18 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-12 16:40:24 [INFO] Writing to disk...
2021-08-12 16:40:29 [INFO] Finished.
2021-08-13 09:44:54 [INFO] Starting.
2021-08-13 09:44:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-13 09:44:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-13 09:44:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:54 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:54 [INFO] Writing every 10 Runs.
2021-08-13 09:44:54 [INFO] Processing SRX4024408. (1/22)
2021-08-13 09:44:54 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-13 09:45:00 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-13 09:45:06 [INFO] Processing SRX4024409. (2/22)
2021-08-13 09:45:06 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-13 09:45:13 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-13 09:45:20 [INFO] Processing SRX4024411. (3/22)
2021-08-13 09:45:20 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-13 09:45:25 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-13 09:45:28 [INFO] Processing SRX4024402. (4/22)
2021-08-13 09:45:28 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-13 09:45:35 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-13 09:45:40 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-13 09:45:44 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-13 09:45:48 [INFO] Writing to disk...
2021-08-13 09:45:50 [INFO] Processing SRX4024404. (5/22)
2021-08-13 09:45:50 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-13 09:45:55 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-13 09:45:59 [INFO] Processing SRX4024418. (6/22)
2021-08-13 09:45:59 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-13 09:46:04 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-13 09:46:10 [INFO] Processing SRX4024417. (7/22)
2021-08-13 09:46:10 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-13 09:46:17 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-13 09:46:23 [INFO] Processing SRX4024406. (8/22)
2021-08-13 09:46:23 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-13 09:46:29 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-13 09:46:35 [INFO] Processing SRX4024421. (9/22)
2021-08-13 09:46:35 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-13 09:46:41 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-13 09:46:46 [INFO] Writing to disk...
2021-08-13 09:46:58 [INFO] Processing SRX4024413. (10/22)
2021-08-13 09:46:58 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-13 09:47:04 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-13 09:47:12 [INFO] Processing SRX4024419. (11/22)
2021-08-13 09:47:12 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-13 09:47:16 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-13 09:47:22 [INFO] Processing SRX4024407. (12/22)
2021-08-13 09:47:22 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-13 09:47:27 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-13 09:47:35 [INFO] Processing SRX4024414. (13/22)
2021-08-13 09:47:35 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-13 09:47:40 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-13 09:47:47 [INFO] Processing SRX4024400. (14/22)
2021-08-13 09:47:47 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-13 09:47:53 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-13 09:47:57 [INFO] Writing to disk...
2021-08-13 09:48:08 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-13 09:48:17 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-13 09:48:21 [INFO] Processing SRX4024420. (15/22)
2021-08-13 09:48:21 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-13 09:48:27 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-13 09:48:33 [INFO] Processing SRX4024416. (16/22)
2021-08-13 09:48:33 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-13 09:48:41 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-13 09:48:48 [INFO] Processing SRX4024403. (17/22)
2021-08-13 09:48:48 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-13 09:48:52 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-13 09:49:02 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-13 09:49:07 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-13 09:49:18 [INFO] Writing to disk...
2021-08-13 09:49:34 [INFO] Processing SRX4024415. (18/22)
2021-08-13 09:49:34 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-13 09:49:40 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-13 09:49:46 [INFO] Processing SRX4024410. (19/22)
2021-08-13 09:49:46 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-13 09:49:54 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-13 09:50:01 [INFO] Processing SRX4024401. (20/22)
2021-08-13 09:50:01 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-13 09:50:09 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-13 09:50:19 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-13 09:50:23 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-13 09:50:29 [INFO] Processing SRX4024405. (21/22)
2021-08-13 09:50:29 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-13 09:50:35 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-13 09:50:42 [INFO] Writing to disk...
2021-08-13 09:50:58 [INFO] Processing SRX4024412. (22/22)
2021-08-13 09:50:58 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-13 09:51:04 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-13 09:51:11 [INFO] Writing to disk...
2021-08-13 09:51:24 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX4024408. (1/22)
2021-08-13 17:23:02 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-13 17:23:10 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-13 17:23:19 [INFO] Processing SRX4024409. (2/22)
2021-08-13 17:23:19 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-13 17:23:30 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-13 17:23:41 [INFO] Processing SRX4024411. (3/22)
2021-08-13 17:23:41 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-13 17:23:47 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-13 17:23:54 [INFO] Processing SRX4024402. (4/22)
2021-08-13 17:23:54 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-13 17:24:03 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-13 17:24:13 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-13 17:24:19 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-13 17:24:25 [INFO] Writing to disk...
2021-08-13 17:24:28 [INFO] Processing SRX4024404. (5/22)
2021-08-13 17:24:28 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-13 17:24:36 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-13 17:24:43 [INFO] Processing SRX4024418. (6/22)
2021-08-13 17:24:43 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-13 17:24:50 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-13 17:24:58 [INFO] Processing SRX4024417. (7/22)
2021-08-13 17:24:58 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-13 17:25:09 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-13 17:25:21 [INFO] Processing SRX4024406. (8/22)
2021-08-13 17:25:21 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-13 17:25:30 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-13 17:25:39 [INFO] Processing SRX4024421. (9/22)
2021-08-13 17:25:39 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-13 17:25:47 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-13 17:25:56 [INFO] Writing to disk...
2021-08-13 17:26:09 [INFO] Processing SRX4024413. (10/22)
2021-08-13 17:26:09 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-13 17:26:18 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-13 17:26:26 [INFO] Processing SRX4024419. (11/22)
2021-08-13 17:26:26 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-13 17:26:35 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-13 17:26:44 [INFO] Processing SRX4024407. (12/22)
2021-08-13 17:26:44 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-13 17:26:54 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-13 17:27:06 [INFO] Processing SRX4024414. (13/22)
2021-08-13 17:27:06 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-13 17:27:14 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-13 17:27:24 [INFO] Processing SRX4024400. (14/22)
2021-08-13 17:27:24 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-13 17:27:36 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-13 17:27:44 [INFO] Writing to disk...
2021-08-13 17:28:00 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-13 17:28:13 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-13 17:28:20 [INFO] Processing SRX4024420. (15/22)
2021-08-13 17:28:20 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-13 17:28:30 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-13 17:28:41 [INFO] Processing SRX4024416. (16/22)
2021-08-13 17:28:41 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-13 17:28:54 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-13 17:29:07 [INFO] Processing SRX4024403. (17/22)
2021-08-13 17:29:07 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-13 17:29:15 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-13 17:29:31 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-13 17:29:39 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-13 17:29:53 [INFO] Writing to disk...
2021-08-13 17:30:12 [INFO] Processing SRX4024415. (18/22)
2021-08-13 17:30:12 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-13 17:30:23 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-13 17:30:36 [INFO] Processing SRX4024410. (19/22)
2021-08-13 17:30:36 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-13 17:30:47 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-13 17:30:59 [INFO] Processing SRX4024401. (20/22)
2021-08-13 17:30:59 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-13 17:31:14 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-13 17:31:29 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-13 17:31:38 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-13 17:31:46 [INFO] Processing SRX4024405. (21/22)
2021-08-13 17:31:46 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-13 17:31:57 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-13 17:32:08 [INFO] Writing to disk...
2021-08-13 17:32:31 [INFO] Processing SRX4024412. (22/22)
2021-08-13 17:32:31 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-13 17:32:41 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-13 17:32:50 [INFO] Writing to disk...
2021-08-13 17:33:07 [INFO] Finished.
2021-08-16 11:36:51 [INFO] Starting.
2021-08-16 11:36:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-16 11:36:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-16 11:36:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:52 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:52 [INFO] Writing every 10 Runs.
2021-08-16 11:36:52 [INFO] Processing SRX4024408. (1/22)
2021-08-16 11:36:52 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-16 12:37:49 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-16 21:54:11 [INFO] Starting.
2021-08-16 21:54:11 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-16 21:54:11 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-16 21:54:11 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 21:54:11 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 21:54:11 [INFO] Writing every 10 Runs.
2021-08-16 21:54:11 [INFO] Processing SRX4024408. (1/22)
2021-08-16 21:54:11 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-16 21:57:50 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-16 22:04:52 [INFO] Processing SRX4024409. (2/22)
2021-08-16 22:04:52 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-16 22:11:59 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-16 22:18:57 [INFO] Processing SRX4024411. (3/22)
2021-08-16 22:18:57 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-16 22:25:55 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-16 22:32:51 [INFO] Processing SRX4024402. (4/22)
2021-08-16 22:32:51 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-16 22:39:46 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-16 22:46:43 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-16 22:53:40 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-16 23:00:33 [INFO] Writing to disk...
2021-08-16 23:01:21 [INFO] Processing SRX4024404. (5/22)
2021-08-16 23:01:21 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-16 23:08:20 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-16 23:15:26 [INFO] Processing SRX4024418. (6/22)
2021-08-16 23:15:26 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-16 23:22:26 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-16 23:29:26 [INFO] Processing SRX4024417. (7/22)
2021-08-16 23:29:26 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-16 23:36:29 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-16 23:43:39 [INFO] Processing SRX4024406. (8/22)
2021-08-16 23:43:39 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-16 23:50:37 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-16 23:57:37 [INFO] Processing SRX4024421. (9/22)
2021-08-16 23:57:37 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-17 00:04:20 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-17 00:10:58 [INFO] Writing to disk...
2021-08-17 00:12:05 [INFO] Processing SRX4024413. (10/22)
2021-08-17 00:12:05 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-17 00:19:11 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-17 00:26:13 [INFO] Processing SRX4024419. (11/22)
2021-08-17 00:26:13 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-17 00:33:05 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-17 00:40:06 [INFO] Processing SRX4024407. (12/22)
2021-08-17 00:40:06 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-17 00:47:16 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-17 00:54:22 [INFO] Processing SRX4024414. (13/22)
2021-08-17 00:54:22 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-17 01:01:16 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-17 01:08:21 [INFO] Processing SRX4024400. (14/22)
2021-08-17 01:08:21 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-17 01:15:25 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-17 01:22:14 [INFO] Writing to disk...
2021-08-17 01:23:28 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-17 01:30:31 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-17 01:37:25 [INFO] Processing SRX4024420. (15/22)
2021-08-17 01:37:25 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-17 01:44:17 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-17 01:51:10 [INFO] Processing SRX4024416. (16/22)
2021-08-17 01:51:10 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-17 01:58:27 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-17 02:05:33 [INFO] Processing SRX4024403. (17/22)
2021-08-17 02:05:33 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-17 02:12:30 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-17 02:19:32 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-17 02:26:32 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-17 02:33:29 [INFO] Writing to disk...
2021-08-17 02:34:42 [INFO] Processing SRX4024415. (18/22)
2021-08-17 02:34:42 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-17 02:41:47 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-17 02:48:52 [INFO] Processing SRX4024410. (19/22)
2021-08-17 02:48:52 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-17 02:55:53 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-17 03:02:57 [INFO] Processing SRX4024401. (20/22)
2021-08-17 03:02:58 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-17 03:10:06 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-17 03:17:09 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-17 03:23:48 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-17 03:30:31 [INFO] Processing SRX4024405. (21/22)
2021-08-17 03:30:31 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-17 03:37:37 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-17 03:44:36 [INFO] Writing to disk...
2021-08-17 03:45:54 [INFO] Processing SRX4024412. (22/22)
2021-08-17 03:45:54 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-17 03:52:48 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-17 03:59:46 [INFO] Writing to disk...
2021-08-17 04:01:01 [INFO] Finished.
2021-08-23 13:34:04 [INFO] Starting.
2021-08-23 13:34:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-23 13:34:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-23 13:34:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:04 [INFO] Writing every 10 Runs.
2021-08-23 13:34:04 [INFO] Processing SRX4024408. (1/22)
2021-08-23 13:34:04 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-23 13:34:08 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-23 13:34:12 [INFO] Processing SRX4024409. (2/22)
2021-08-23 13:34:12 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-23 13:34:15 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-23 13:34:19 [INFO] Processing SRX4024411. (3/22)
2021-08-23 13:34:19 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-23 13:34:21 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-23 13:34:23 [INFO] Processing SRX4024402. (4/22)
2021-08-23 13:34:23 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-23 13:34:27 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-23 13:34:31 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-23 13:34:32 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-23 13:34:34 [INFO] Writing to disk...
2021-08-23 13:34:35 [INFO] Processing SRX4024404. (5/22)
2021-08-23 13:34:35 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-23 13:34:38 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-23 13:34:40 [INFO] Processing SRX4024418. (6/22)
2021-08-23 13:34:40 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-23 13:34:42 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-23 13:34:44 [INFO] Processing SRX4024417. (7/22)
2021-08-23 13:34:44 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-23 13:34:48 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-23 13:34:52 [INFO] Processing SRX4024406. (8/22)
2021-08-23 13:34:52 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-23 13:34:55 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-23 13:34:58 [INFO] Processing SRX4024421. (9/22)
2021-08-23 13:34:58 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-23 13:35:00 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-23 13:35:03 [INFO] Writing to disk...
2021-08-23 13:35:12 [INFO] Processing SRX4024413. (10/22)
2021-08-23 13:35:12 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-23 13:35:15 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-23 13:35:19 [INFO] Processing SRX4024419. (11/22)
2021-08-23 13:35:19 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-23 13:35:22 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-23 13:35:26 [INFO] Processing SRX4024407. (12/22)
2021-08-23 13:35:26 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-23 13:35:29 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-23 13:35:32 [INFO] Processing SRX4024414. (13/22)
2021-08-23 13:35:32 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-23 13:35:36 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-23 13:35:39 [INFO] Processing SRX4024400. (14/22)
2021-08-23 13:35:39 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-23 13:35:44 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-23 13:35:46 [INFO] Writing to disk...
2021-08-23 13:35:56 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-23 13:36:01 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-23 13:36:03 [INFO] Processing SRX4024420. (15/22)
2021-08-23 13:36:03 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-23 13:36:06 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-23 13:36:09 [INFO] Processing SRX4024416. (16/22)
2021-08-23 13:36:09 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-23 13:36:13 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-23 13:36:17 [INFO] Processing SRX4024403. (17/22)
2021-08-23 13:36:17 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-23 13:36:20 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-23 13:36:25 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-23 13:36:28 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-23 13:36:34 [INFO] Writing to disk...
2021-08-23 13:36:44 [INFO] Processing SRX4024415. (18/22)
2021-08-23 13:36:44 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-23 13:36:48 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-23 13:36:52 [INFO] Processing SRX4024410. (19/22)
2021-08-23 13:36:52 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-23 13:36:56 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-23 13:37:00 [INFO] Processing SRX4024401. (20/22)
2021-08-23 13:37:00 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-23 13:37:04 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-23 13:37:09 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-23 13:37:11 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-23 13:37:13 [INFO] Processing SRX4024405. (21/22)
2021-08-23 13:37:13 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-23 13:37:15 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-23 13:37:18 [INFO] Writing to disk...
2021-08-23 13:37:29 [INFO] Processing SRX4024412. (22/22)
2021-08-23 13:37:29 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-23 13:37:32 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-23 13:37:35 [INFO] Writing to disk...
2021-08-23 13:37:42 [INFO] Finished.
2021-08-30 12:45:57 [INFO] Starting.
2021-08-30 12:45:57 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-30 12:45:57 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-30 12:45:57 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:58 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:58 [INFO] Writing every 10 Runs.
2021-08-30 12:45:58 [INFO] Processing SRX4024408. (1/22)
2021-08-30 12:45:58 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-30 12:46:02 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-30 12:46:06 [INFO] Processing SRX4024409. (2/22)
2021-08-30 12:46:06 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-30 12:46:09 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-30 12:46:13 [INFO] Processing SRX4024411. (3/22)
2021-08-30 12:46:13 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-30 12:46:15 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-30 12:46:17 [INFO] Processing SRX4024402. (4/22)
2021-08-30 12:46:17 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-30 12:46:21 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-30 12:46:24 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-30 12:46:26 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-30 12:46:29 [INFO] Writing to disk...
2021-08-30 12:46:30 [INFO] Processing SRX4024404. (5/22)
2021-08-30 12:46:30 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-30 12:46:32 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-30 12:46:34 [INFO] Processing SRX4024418. (6/22)
2021-08-30 12:46:34 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-30 12:46:36 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-30 12:46:38 [INFO] Processing SRX4024417. (7/22)
2021-08-30 12:46:38 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-30 12:46:42 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-30 12:46:45 [INFO] Processing SRX4024406. (8/22)
2021-08-30 12:46:45 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-30 12:46:47 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-30 12:46:50 [INFO] Processing SRX4024421. (9/22)
2021-08-30 12:46:50 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-30 12:46:52 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-30 12:46:54 [INFO] Writing to disk...
2021-08-30 12:46:55 [INFO] Processing SRX4024413. (10/22)
2021-08-30 12:46:55 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-30 12:46:59 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-30 12:47:02 [INFO] Processing SRX4024419. (11/22)
2021-08-30 12:47:02 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-30 12:47:04 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-30 12:47:07 [INFO] Processing SRX4024407. (12/22)
2021-08-30 12:47:07 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-30 12:47:10 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-30 12:47:12 [INFO] Processing SRX4024414. (13/22)
2021-08-30 12:47:12 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-30 12:47:15 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-30 12:47:19 [INFO] Processing SRX4024400. (14/22)
2021-08-30 12:47:19 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-30 12:47:22 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-30 12:47:24 [INFO] Writing to disk...
2021-08-30 12:47:26 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-30 12:47:29 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-30 12:47:31 [INFO] Processing SRX4024420. (15/22)
2021-08-30 12:47:31 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-30 12:47:34 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-30 12:47:37 [INFO] Processing SRX4024416. (16/22)
2021-08-30 12:47:37 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-30 12:47:40 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-30 12:47:42 [INFO] Processing SRX4024403. (17/22)
2021-08-30 12:47:42 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-30 12:47:45 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-30 12:47:50 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-30 12:47:53 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-30 12:47:56 [INFO] Writing to disk...
2021-08-30 12:47:58 [INFO] Processing SRX4024415. (18/22)
2021-08-30 12:47:58 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-30 12:48:01 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-30 12:48:05 [INFO] Processing SRX4024410. (19/22)
2021-08-30 12:48:05 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-30 12:48:08 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-30 12:48:11 [INFO] Processing SRX4024401. (20/22)
2021-08-30 12:48:11 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-30 12:48:13 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-30 12:48:17 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-30 12:48:18 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-30 12:48:20 [INFO] Processing SRX4024405. (21/22)
2021-08-30 12:48:20 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-30 12:48:23 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-30 12:48:25 [INFO] Writing to disk...
2021-08-30 12:48:27 [INFO] Processing SRX4024412. (22/22)
2021-08-30 12:48:27 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-30 12:48:29 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-30 12:48:32 [INFO] Writing to disk...
2021-08-30 12:48:33 [INFO] Finished.
2021-08-30 21:26:04 [INFO] Starting.
2021-08-30 21:26:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/
2021-08-30 21:26:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP144391/aggregate.hdf5
2021-08-30 21:26:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:26:05 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:26:05 [INFO] Writing every 10 Runs.
2021-08-30 21:26:05 [INFO] Processing SRX4024408. (1/22)
2021-08-30 21:26:05 [INFO] Processing SRX4024408-SRR7096049. (1/52)
2021-08-30 21:26:08 [INFO] Processing SRX4024408-SRR7096050. (2/52)
2021-08-30 21:26:10 [INFO] Processing SRX4024409. (2/22)
2021-08-30 21:26:10 [INFO] Processing SRX4024409-SRR7096052. (3/52)
2021-08-30 21:26:13 [INFO] Processing SRX4024409-SRR7096051. (4/52)
2021-08-30 21:26:16 [INFO] Processing SRX4024411. (3/22)
2021-08-30 21:26:16 [INFO] Processing SRX4024411-SRR7096055. (5/52)
2021-08-30 21:26:18 [INFO] Processing SRX4024411-SRR7096056. (6/52)
2021-08-30 21:26:20 [INFO] Processing SRX4024402. (4/22)
2021-08-30 21:26:20 [INFO] Processing SRX4024402-SRR7096036. (7/52)
2021-08-30 21:26:22 [INFO] Processing SRX4024402-SRR7096035. (8/52)
2021-08-30 21:26:25 [INFO] Processing SRX4024402-SRR7096034. (9/52)
2021-08-30 21:26:27 [INFO] Processing SRX4024402-SRR7096033. (10/52)
2021-08-30 21:26:29 [INFO] Writing to disk...
2021-08-30 21:26:30 [INFO] Processing SRX4024404. (5/22)
2021-08-30 21:26:30 [INFO] Processing SRX4024404-SRR7096042. (11/52)
2021-08-30 21:26:32 [INFO] Processing SRX4024404-SRR7096041. (12/52)
2021-08-30 21:26:34 [INFO] Processing SRX4024418. (6/22)
2021-08-30 21:26:34 [INFO] Processing SRX4024418-SRR7096069. (13/52)
2021-08-30 21:26:37 [INFO] Processing SRX4024418-SRR7096070. (14/52)
2021-08-30 21:26:39 [INFO] Processing SRX4024417. (7/22)
2021-08-30 21:26:39 [INFO] Processing SRX4024417-SRR7096067. (15/52)
2021-08-30 21:26:41 [INFO] Processing SRX4024417-SRR7096068. (16/52)
2021-08-30 21:26:45 [INFO] Processing SRX4024406. (8/22)
2021-08-30 21:26:45 [INFO] Processing SRX4024406-SRR7096045. (17/52)
2021-08-30 21:26:47 [INFO] Processing SRX4024406-SRR7096046. (18/52)
2021-08-30 21:26:49 [INFO] Processing SRX4024421. (9/22)
2021-08-30 21:26:49 [INFO] Processing SRX4024421-SRR7096075. (19/52)
2021-08-30 21:26:52 [INFO] Processing SRX4024421-SRR7096076. (20/52)
2021-08-30 21:26:54 [INFO] Writing to disk...
2021-08-30 21:26:57 [INFO] Processing SRX4024413. (10/22)
2021-08-30 21:26:57 [INFO] Processing SRX4024413-SRR7096060. (21/52)
2021-08-30 21:27:00 [INFO] Processing SRX4024413-SRR7096059. (22/52)
2021-08-30 21:27:02 [INFO] Processing SRX4024419. (11/22)
2021-08-30 21:27:02 [INFO] Processing SRX4024419-SRR7096071. (23/52)
2021-08-30 21:27:04 [INFO] Processing SRX4024419-SRR7096072. (24/52)
2021-08-30 21:27:07 [INFO] Processing SRX4024407. (12/22)
2021-08-30 21:27:07 [INFO] Processing SRX4024407-SRR7096048. (25/52)
2021-08-30 21:27:10 [INFO] Processing SRX4024407-SRR7096047. (26/52)
2021-08-30 21:27:12 [INFO] Processing SRX4024414. (13/22)
2021-08-30 21:27:12 [INFO] Processing SRX4024414-SRR7096061. (27/52)
2021-08-30 21:27:14 [INFO] Processing SRX4024414-SRR7096062. (28/52)
2021-08-30 21:27:17 [INFO] Processing SRX4024400. (14/22)
2021-08-30 21:27:17 [INFO] Processing SRX4024400-SRR7096027. (29/52)
2021-08-30 21:27:19 [INFO] Processing SRX4024400-SRR7096025. (30/52)
2021-08-30 21:27:21 [INFO] Writing to disk...
2021-08-30 21:27:26 [INFO] Processing SRX4024400-SRR7096028. (31/52)
2021-08-30 21:27:29 [INFO] Processing SRX4024400-SRR7096026. (32/52)
2021-08-30 21:27:31 [INFO] Processing SRX4024420. (15/22)
2021-08-30 21:27:31 [INFO] Processing SRX4024420-SRR7096074. (33/52)
2021-08-30 21:27:33 [INFO] Processing SRX4024420-SRR7096073. (34/52)
2021-08-30 21:27:36 [INFO] Processing SRX4024416. (16/22)
2021-08-30 21:27:36 [INFO] Processing SRX4024416-SRR7096066. (35/52)
2021-08-30 21:27:38 [INFO] Processing SRX4024416-SRR7096065. (36/52)
2021-08-30 21:27:41 [INFO] Processing SRX4024403. (17/22)
2021-08-30 21:27:41 [INFO] Processing SRX4024403-SRR7096038. (37/52)
2021-08-30 21:27:43 [INFO] Processing SRX4024403-SRR7096040. (38/52)
2021-08-30 21:27:47 [INFO] Processing SRX4024403-SRR7096037. (39/52)
2021-08-30 21:27:50 [INFO] Processing SRX4024403-SRR7096039. (40/52)
2021-08-30 21:27:53 [INFO] Writing to disk...
2021-08-30 21:27:59 [INFO] Processing SRX4024415. (18/22)
2021-08-30 21:27:59 [INFO] Processing SRX4024415-SRR7096063. (41/52)
2021-08-30 21:28:01 [INFO] Processing SRX4024415-SRR7096064. (42/52)
2021-08-30 21:28:04 [INFO] Processing SRX4024410. (19/22)
2021-08-30 21:28:04 [INFO] Processing SRX4024410-SRR7096053. (43/52)
2021-08-30 21:28:07 [INFO] Processing SRX4024410-SRR7096054. (44/52)
2021-08-30 21:28:10 [INFO] Processing SRX4024401. (20/22)
2021-08-30 21:28:10 [INFO] Processing SRX4024401-SRR7096031. (45/52)
2021-08-30 21:28:12 [INFO] Processing SRX4024401-SRR7096032. (46/52)
2021-08-30 21:28:15 [INFO] Processing SRX4024401-SRR7096029. (47/52)
2021-08-30 21:28:17 [INFO] Processing SRX4024401-SRR7096030. (48/52)
2021-08-30 21:28:18 [INFO] Processing SRX4024405. (21/22)
2021-08-30 21:28:18 [INFO] Processing SRX4024405-SRR7096043. (49/52)
2021-08-30 21:28:20 [INFO] Processing SRX4024405-SRR7096044. (50/52)
2021-08-30 21:28:22 [INFO] Writing to disk...
2021-08-30 21:28:24 [INFO] Processing SRX4024412. (22/22)
2021-08-30 21:28:24 [INFO] Processing SRX4024412-SRR7096057. (51/52)
2021-08-30 21:28:26 [INFO] Processing SRX4024412-SRR7096058. (52/52)
2021-08-30 21:28:28 [INFO] Writing to disk...
2021-08-30 21:28:28 [INFO] Finished.