2021-08-02 14:43:29 [INFO] Starting.
2021-08-02 14:43:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-02 14:43:29 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-02 14:43:29 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:29 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:29 [INFO] Building aggregate.
2021-08-02 14:43:29 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX5252289. (1/8)
2021-08-02 14:43:30 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-02 14:43:40 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-02 14:43:44 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-02 14:43:53 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-02 14:44:04 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-02 14:44:11 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-02 14:44:20 [INFO] Processing SRX5252288. (2/8)
2021-08-02 14:44:20 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-02 14:44:30 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-02 14:44:41 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-02 14:44:56 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-02 14:45:01 [INFO] Writing to disk...
2021-08-02 14:45:05 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-02 14:45:16 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-02 14:45:21 [INFO] Processing SRX5252285. (3/8)
2021-08-02 14:45:21 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-02 14:45:33 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-02 14:45:40 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-02 14:45:50 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-02 14:45:58 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-02 14:46:11 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-02 14:46:21 [INFO] Processing SRX5252286. (4/8)
2021-08-02 14:46:21 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-02 14:46:32 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-02 14:46:43 [INFO] Writing to disk...
2021-08-02 14:46:52 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-02 14:47:03 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-02 14:47:10 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-02 14:47:23 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-02 14:47:34 [INFO] Processing SRX5252287. (5/8)
2021-08-02 14:47:34 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-02 14:47:44 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-02 14:47:56 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-02 14:48:02 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-02 14:48:12 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-02 14:48:20 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-02 14:48:32 [INFO] Writing to disk...
2021-08-02 14:48:46 [INFO] Processing SRX5252290. (6/8)
2021-08-02 14:48:46 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-02 14:48:58 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-02 14:49:09 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-02 14:49:20 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-02 14:49:30 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-02 14:49:41 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-02 14:49:48 [INFO] Processing SRX5252283. (7/8)
2021-08-02 14:49:48 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-02 14:49:55 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-02 14:50:10 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-02 14:50:20 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-02 14:50:31 [INFO] Writing to disk...
2021-08-02 14:50:46 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-02 14:50:52 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-02 14:51:05 [INFO] Processing SRX5252284. (8/8)
2021-08-02 14:51:05 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-02 14:51:12 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-02 14:51:27 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-02 14:51:34 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-02 14:51:45 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-02 14:51:58 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-02 14:52:12 [INFO] Writing to disk...
2021-08-02 14:52:28 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:22 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:22 [INFO] Writing every 10 Runs.
2021-08-12 14:31:22 [INFO] Processing SRX5252289. (1/8)
2021-08-12 14:31:22 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-12 14:31:33 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-12 14:31:37 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-12 14:31:48 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-12 14:31:59 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-12 14:32:06 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-12 14:32:18 [INFO] Processing SRX5252288. (2/8)
2021-08-12 14:32:18 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-12 14:32:30 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-12 14:32:42 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-12 14:32:54 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-12 14:32:58 [INFO] Writing to disk...
2021-08-12 14:33:03 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-12 14:33:15 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-12 14:33:20 [INFO] Processing SRX5252285. (3/8)
2021-08-12 14:33:20 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-12 14:33:32 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-12 14:33:38 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-12 14:33:48 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-12 14:33:57 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-12 14:34:10 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-12 14:34:23 [INFO] Processing SRX5252286. (4/8)
2021-08-12 14:34:23 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-12 14:34:37 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-12 14:34:46 [INFO] Writing to disk...
2021-08-12 14:34:59 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-12 14:35:11 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-12 14:35:18 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-12 14:35:31 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-12 14:35:42 [INFO] Processing SRX5252287. (5/8)
2021-08-12 14:35:42 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-12 14:35:56 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-12 14:36:06 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-12 14:36:11 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-12 14:36:22 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-12 14:36:30 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-12 14:36:43 [INFO] Writing to disk...
2021-08-12 14:36:59 [INFO] Processing SRX5252290. (6/8)
2021-08-12 14:36:59 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-12 14:37:10 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-12 14:37:21 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-12 14:37:32 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-12 14:37:40 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-12 14:37:53 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-12 14:37:59 [INFO] Processing SRX5252283. (7/8)
2021-08-12 14:37:59 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-12 14:38:04 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-12 14:38:15 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-12 14:38:25 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-12 14:38:37 [INFO] Writing to disk...
2021-08-12 14:38:49 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-12 14:38:54 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-12 14:39:04 [INFO] Processing SRX5252284. (8/8)
2021-08-12 14:39:04 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-12 14:39:09 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-12 14:39:20 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-12 14:39:26 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-12 14:39:37 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-12 14:39:47 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-12 14:39:58 [INFO] Writing to disk...
2021-08-12 14:40:13 [INFO] Finished.
2021-08-12 16:34:27 [INFO] Starting.
2021-08-12 16:34:27 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-12 16:34:27 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-12 16:34:27 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:27 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:27 [INFO] Writing every 10 Runs.
2021-08-12 16:34:27 [INFO] Processing SRX5252289. (1/8)
2021-08-12 16:34:27 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-12 16:34:38 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-12 16:34:44 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-12 16:34:56 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-12 16:35:10 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-12 16:35:18 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-12 16:35:30 [INFO] Processing SRX5252288. (2/8)
2021-08-12 16:35:30 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-12 16:35:42 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-12 16:35:56 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-12 16:36:10 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-12 16:36:17 [INFO] Writing to disk...
2021-08-12 16:36:22 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-12 16:36:37 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-12 16:36:44 [INFO] Processing SRX5252285. (3/8)
2021-08-12 16:36:44 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-12 16:36:59 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-12 16:37:05 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-12 16:37:18 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-12 16:37:27 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-12 16:37:43 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-12 16:37:59 [INFO] Processing SRX5252286. (4/8)
2021-08-12 16:37:59 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-12 16:38:13 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-12 16:38:26 [INFO] Writing to disk...
2021-08-12 16:38:41 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-12 16:38:54 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-12 16:39:01 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-12 16:39:17 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-12 16:39:29 [INFO] Processing SRX5252287. (5/8)
2021-08-12 16:39:29 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-12 16:39:40 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-12 16:39:53 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-12 16:40:00 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-12 16:40:13 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-12 16:40:23 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-12 16:40:38 [INFO] Writing to disk...
2021-08-12 16:40:56 [INFO] Processing SRX5252290. (6/8)
2021-08-12 16:40:56 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-12 16:41:14 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-12 16:41:28 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-12 16:41:43 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-12 16:41:53 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-12 16:42:08 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-12 16:42:16 [INFO] Processing SRX5252283. (7/8)
2021-08-12 16:42:16 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-12 16:42:24 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-12 16:42:37 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-12 16:42:50 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-12 16:43:02 [INFO] Writing to disk...
2021-08-12 16:43:20 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-12 16:43:28 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-12 16:43:41 [INFO] Processing SRX5252284. (8/8)
2021-08-12 16:43:41 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-12 16:43:48 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-12 16:44:01 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-12 16:44:09 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-12 16:44:23 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-12 16:44:38 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-12 16:44:55 [INFO] Writing to disk...
2021-08-12 16:45:14 [INFO] Finished.
2021-08-13 09:44:54 [INFO] Starting.
2021-08-13 09:44:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-13 09:44:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-13 09:44:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:55 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:55 [INFO] Writing every 10 Runs.
2021-08-13 09:44:55 [INFO] Processing SRX5252289. (1/8)
2021-08-13 09:44:55 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-13 09:45:04 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-13 09:45:10 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-13 09:45:20 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-13 09:45:30 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-13 09:45:36 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-13 09:45:47 [INFO] Processing SRX5252288. (2/8)
2021-08-13 09:45:47 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-13 09:45:57 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-13 09:46:06 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-13 09:46:19 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-13 09:46:25 [INFO] Writing to disk...
2021-08-13 09:46:31 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-13 09:46:42 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-13 09:46:50 [INFO] Processing SRX5252285. (3/8)
2021-08-13 09:46:50 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-13 09:47:02 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-13 09:47:08 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-13 09:47:20 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-13 09:47:28 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-13 09:47:40 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-13 09:47:50 [INFO] Processing SRX5252286. (4/8)
2021-08-13 09:47:50 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-13 09:48:03 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-13 09:48:14 [INFO] Writing to disk...
2021-08-13 09:48:28 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-13 09:48:41 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-13 09:48:49 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-13 09:49:01 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-13 09:49:15 [INFO] Processing SRX5252287. (5/8)
2021-08-13 09:49:15 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-13 09:49:27 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-13 09:49:39 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-13 09:49:46 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-13 09:49:57 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-13 09:50:07 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-13 09:50:20 [INFO] Writing to disk...
2021-08-13 09:50:41 [INFO] Processing SRX5252290. (6/8)
2021-08-13 09:50:41 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-13 09:50:55 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-13 09:51:09 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-13 09:51:23 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-13 09:51:33 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-13 09:51:48 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-13 09:51:56 [INFO] Processing SRX5252283. (7/8)
2021-08-13 09:51:56 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-13 09:52:03 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-13 09:52:19 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-13 09:52:31 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-13 09:52:42 [INFO] Writing to disk...
2021-08-13 09:53:04 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-13 09:53:12 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-13 09:53:25 [INFO] Processing SRX5252284. (8/8)
2021-08-13 09:53:25 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-13 09:53:33 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-13 09:53:48 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-13 09:53:56 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-13 09:54:11 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-13 09:54:25 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-13 09:54:37 [INFO] Writing to disk...
2021-08-13 09:55:02 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX5252289. (1/8)
2021-08-13 17:23:02 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-13 17:23:17 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-13 17:23:25 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-13 17:23:39 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-13 17:23:54 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-13 17:24:06 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-13 17:24:25 [INFO] Processing SRX5252288. (2/8)
2021-08-13 17:24:25 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-13 17:24:43 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-13 17:25:00 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-13 17:25:22 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-13 17:25:31 [INFO] Writing to disk...
2021-08-13 17:25:40 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-13 17:26:02 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-13 17:26:11 [INFO] Processing SRX5252285. (3/8)
2021-08-13 17:26:11 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-13 17:26:29 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-13 17:26:40 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-13 17:26:57 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-13 17:27:12 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-13 17:27:30 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-13 17:27:53 [INFO] Processing SRX5252286. (4/8)
2021-08-13 17:27:53 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-13 17:28:15 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-13 17:28:34 [INFO] Writing to disk...
2021-08-13 17:28:57 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-13 17:29:18 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-13 17:29:31 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-13 17:29:52 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-13 17:30:13 [INFO] Processing SRX5252287. (5/8)
2021-08-13 17:30:13 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-13 17:30:32 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-13 17:30:56 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-13 17:31:07 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-13 17:31:27 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-13 17:31:44 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-13 17:32:03 [INFO] Writing to disk...
2021-08-13 17:32:32 [INFO] Processing SRX5252290. (6/8)
2021-08-13 17:32:32 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-13 17:32:53 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-13 17:33:14 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-13 17:33:35 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-13 17:33:55 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-13 17:34:19 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-13 17:34:33 [INFO] Processing SRX5252283. (7/8)
2021-08-13 17:34:33 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-13 17:34:49 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-13 17:35:17 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-13 17:35:42 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-13 17:36:08 [INFO] Writing to disk...
2021-08-13 17:37:01 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-13 17:37:16 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-13 17:37:42 [INFO] Processing SRX5252284. (8/8)
2021-08-13 17:37:42 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-13 17:37:58 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-13 17:38:25 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-13 17:38:40 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-13 17:39:05 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-13 17:39:31 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-13 17:39:56 [INFO] Writing to disk...
2021-08-13 17:40:49 [INFO] Finished.
2021-08-16 11:36:46 [INFO] Starting.
2021-08-16 11:36:46 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-16 11:36:46 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-16 11:36:46 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:46 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:46 [INFO] Writing every 10 Runs.
2021-08-16 11:36:46 [INFO] Processing SRX5252289. (1/8)
2021-08-16 11:36:46 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-16 11:44:42 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-16 22:33:47 [INFO] Starting.
2021-08-16 22:33:47 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-16 22:33:47 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-16 22:33:47 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 22:33:47 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 22:33:47 [INFO] Writing every 10 Runs.
2021-08-16 22:33:47 [INFO] Processing SRX5252289. (1/8)
2021-08-16 22:33:47 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-16 22:36:21 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-16 22:41:39 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-16 22:46:55 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-16 22:52:18 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-16 22:57:36 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-16 23:02:57 [INFO] Processing SRX5252288. (2/8)
2021-08-16 23:02:57 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-16 23:08:18 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-16 23:13:39 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-16 23:19:03 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-16 23:24:24 [INFO] Writing to disk...
2021-08-16 23:25:00 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-16 23:30:25 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-16 23:35:48 [INFO] Processing SRX5252285. (3/8)
2021-08-16 23:35:48 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-16 23:41:17 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-16 23:46:38 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-16 23:52:05 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-16 23:57:28 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-17 00:02:56 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-17 00:08:26 [INFO] Processing SRX5252286. (4/8)
2021-08-17 00:08:26 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-17 00:13:56 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-17 00:19:22 [INFO] Writing to disk...
2021-08-17 00:20:12 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-17 00:25:38 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-17 00:31:06 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-17 00:36:35 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-17 00:42:06 [INFO] Processing SRX5252287. (5/8)
2021-08-17 00:42:06 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-17 00:47:37 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-17 00:53:09 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-17 00:58:36 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-17 01:04:08 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-17 01:09:38 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-17 01:15:10 [INFO] Writing to disk...
2021-08-17 01:16:08 [INFO] Processing SRX5252290. (6/8)
2021-08-17 01:16:08 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-17 01:21:41 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-17 01:27:15 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-17 01:32:46 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-17 01:38:19 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-17 01:43:54 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-17 01:49:25 [INFO] Processing SRX5252283. (7/8)
2021-08-17 01:49:25 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-17 01:54:55 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-17 02:00:31 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-17 02:06:05 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-17 02:11:42 [INFO] Writing to disk...
2021-08-17 02:12:49 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-17 02:18:21 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-17 02:24:00 [INFO] Processing SRX5252284. (8/8)
2021-08-17 02:24:00 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-17 02:29:33 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-17 02:35:13 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-17 02:40:48 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-17 02:46:28 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-17 02:52:07 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-17 02:57:48 [INFO] Writing to disk...
2021-08-17 02:59:00 [INFO] Finished.
2021-08-23 13:34:04 [INFO] Starting.
2021-08-23 13:34:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-23 13:34:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-23 13:34:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:04 [INFO] Writing every 10 Runs.
2021-08-23 13:34:04 [INFO] Processing SRX5252289. (1/8)
2021-08-23 13:34:04 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-23 13:34:11 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-23 13:34:14 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-23 13:34:21 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-23 13:34:27 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-23 13:34:32 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-23 13:34:38 [INFO] Processing SRX5252288. (2/8)
2021-08-23 13:34:38 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-23 13:34:46 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-23 13:34:54 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-23 13:35:02 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-23 13:35:05 [INFO] Writing to disk...
2021-08-23 13:35:07 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-23 13:35:15 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-23 13:35:19 [INFO] Processing SRX5252285. (3/8)
2021-08-23 13:35:19 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-23 13:35:26 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-23 13:35:29 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-23 13:35:37 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-23 13:35:42 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-23 13:35:50 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-23 13:35:59 [INFO] Processing SRX5252286. (4/8)
2021-08-23 13:35:59 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-23 13:36:06 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-23 13:36:12 [INFO] Writing to disk...
2021-08-23 13:36:22 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-23 13:36:29 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-23 13:36:34 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-23 13:36:42 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-23 13:36:50 [INFO] Processing SRX5252287. (5/8)
2021-08-23 13:36:50 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-23 13:36:56 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-23 13:37:04 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-23 13:37:08 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-23 13:37:14 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-23 13:37:19 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-23 13:37:25 [INFO] Writing to disk...
2021-08-23 13:37:38 [INFO] Processing SRX5252290. (6/8)
2021-08-23 13:37:38 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-23 13:37:46 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-23 13:37:53 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-23 13:38:00 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-23 13:38:06 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-23 13:38:13 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-23 13:38:17 [INFO] Processing SRX5252283. (7/8)
2021-08-23 13:38:17 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-23 13:38:20 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-23 13:38:29 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-23 13:38:36 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-23 13:38:43 [INFO] Writing to disk...
2021-08-23 13:38:57 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-23 13:39:01 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-23 13:39:08 [INFO] Processing SRX5252284. (8/8)
2021-08-23 13:39:08 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-23 13:39:12 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-23 13:39:19 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-23 13:39:22 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-23 13:39:29 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-23 13:39:37 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-23 13:39:46 [INFO] Writing to disk...
2021-08-23 13:40:01 [INFO] Finished.
2021-08-30 12:45:58 [INFO] Starting.
2021-08-30 12:45:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-30 12:45:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-30 12:45:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:58 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:58 [INFO] Writing every 10 Runs.
2021-08-30 12:45:58 [INFO] Processing SRX5252289. (1/8)
2021-08-30 12:45:58 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-30 12:46:04 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-30 12:46:06 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-30 12:46:10 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-30 12:46:16 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-30 12:46:20 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-30 12:46:26 [INFO] Processing SRX5252288. (2/8)
2021-08-30 12:46:26 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-30 12:46:32 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-30 12:46:38 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-30 12:46:44 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-30 12:46:46 [INFO] Writing to disk...
2021-08-30 12:46:48 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-30 12:46:53 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-30 12:46:56 [INFO] Processing SRX5252285. (3/8)
2021-08-30 12:46:56 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-30 12:47:01 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-30 12:47:05 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-30 12:47:11 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-30 12:47:15 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-30 12:47:23 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-30 12:47:29 [INFO] Processing SRX5252286. (4/8)
2021-08-30 12:47:29 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-30 12:47:35 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-30 12:47:39 [INFO] Writing to disk...
2021-08-30 12:47:46 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-30 12:47:52 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-30 12:47:55 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-30 12:48:00 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-30 12:48:05 [INFO] Processing SRX5252287. (5/8)
2021-08-30 12:48:05 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-30 12:48:10 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-30 12:48:15 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-30 12:48:18 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-30 12:48:21 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-30 12:48:26 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-30 12:48:31 [INFO] Writing to disk...
2021-08-30 12:48:35 [INFO] Processing SRX5252290. (6/8)
2021-08-30 12:48:35 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-30 12:48:40 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-30 12:48:45 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-30 12:48:50 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-30 12:48:53 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-30 12:48:59 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-30 12:49:03 [INFO] Processing SRX5252283. (7/8)
2021-08-30 12:49:03 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-30 12:49:06 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-30 12:49:11 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-30 12:49:15 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-30 12:49:21 [INFO] Writing to disk...
2021-08-30 12:49:29 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-30 12:49:31 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-30 12:49:36 [INFO] Processing SRX5252284. (8/8)
2021-08-30 12:49:36 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-30 12:49:39 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-30 12:49:45 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-30 12:49:48 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-30 12:49:54 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-30 12:50:00 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-30 12:50:06 [INFO] Writing to disk...
2021-08-30 12:50:09 [INFO] Finished.
2021-08-30 21:26:10 [INFO] Starting.
2021-08-30 21:26:10 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/
2021-08-30 21:26:10 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP179647/aggregate.hdf5
2021-08-30 21:26:10 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:26:11 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:26:11 [INFO] Writing every 10 Runs.
2021-08-30 21:26:11 [INFO] Processing SRX5252289. (1/8)
2021-08-30 21:26:11 [INFO] Processing SRX5252289-SRR8445242. (1/48)
2021-08-30 21:26:15 [INFO] Processing SRX5252289-SRR8445238. (2/48)
2021-08-30 21:26:17 [INFO] Processing SRX5252289-SRR8445240. (3/48)
2021-08-30 21:26:22 [INFO] Processing SRX5252289-SRR8445239. (4/48)
2021-08-30 21:26:26 [INFO] Processing SRX5252289-SRR8445237. (5/48)
2021-08-30 21:26:30 [INFO] Processing SRX5252289-SRR8445241. (6/48)
2021-08-30 21:26:35 [INFO] Processing SRX5252288. (2/8)
2021-08-30 21:26:35 [INFO] Processing SRX5252288-SRR8445233. (7/48)
2021-08-30 21:26:40 [INFO] Processing SRX5252288-SRR8445235. (8/48)
2021-08-30 21:26:44 [INFO] Processing SRX5252288-SRR8445236. (9/48)
2021-08-30 21:26:49 [INFO] Processing SRX5252288-SRR8445232. (10/48)
2021-08-30 21:26:52 [INFO] Writing to disk...
2021-08-30 21:26:52 [INFO] Processing SRX5252288-SRR8445234. (11/48)
2021-08-30 21:26:57 [INFO] Processing SRX5252288-SRR8445231. (12/48)
2021-08-30 21:27:00 [INFO] Processing SRX5252285. (3/8)
2021-08-30 21:27:00 [INFO] Processing SRX5252285-SRR8445216. (13/48)
2021-08-30 21:27:04 [INFO] Processing SRX5252285-SRR8445214. (14/48)
2021-08-30 21:27:07 [INFO] Processing SRX5252285-SRR8445215. (15/48)
2021-08-30 21:27:11 [INFO] Processing SRX5252285-SRR8445213. (16/48)
2021-08-30 21:27:14 [INFO] Processing SRX5252285-SRR8445217. (17/48)
2021-08-30 21:27:18 [INFO] Processing SRX5252285-SRR8445218. (18/48)
2021-08-30 21:27:22 [INFO] Processing SRX5252286. (4/8)
2021-08-30 21:27:22 [INFO] Processing SRX5252286-SRR8445223. (19/48)
2021-08-30 21:27:27 [INFO] Processing SRX5252286-SRR8445219. (20/48)
2021-08-30 21:27:31 [INFO] Writing to disk...
2021-08-30 21:27:40 [INFO] Processing SRX5252286-SRR8445221. (21/48)
2021-08-30 21:27:45 [INFO] Processing SRX5252286-SRR8445220. (22/48)
2021-08-30 21:27:47 [INFO] Processing SRX5252286-SRR8445224. (23/48)
2021-08-30 21:27:50 [INFO] Processing SRX5252286-SRR8445222. (24/48)
2021-08-30 21:27:53 [INFO] Processing SRX5252287. (5/8)
2021-08-30 21:27:53 [INFO] Processing SRX5252287-SRR8445227. (25/48)
2021-08-30 21:27:57 [INFO] Processing SRX5252287-SRR8445228. (26/48)
2021-08-30 21:28:01 [INFO] Processing SRX5252287-SRR8445226. (27/48)
2021-08-30 21:28:03 [INFO] Processing SRX5252287-SRR8445229. (28/48)
2021-08-30 21:28:07 [INFO] Processing SRX5252287-SRR8445225. (29/48)
2021-08-30 21:28:10 [INFO] Processing SRX5252287-SRR8445230. (30/48)
2021-08-30 21:28:14 [INFO] Writing to disk...
2021-08-30 21:28:19 [INFO] Processing SRX5252290. (6/8)
2021-08-30 21:28:19 [INFO] Processing SRX5252290-SRR8445248. (31/48)
2021-08-30 21:28:23 [INFO] Processing SRX5252290-SRR8445245. (32/48)
2021-08-30 21:28:27 [INFO] Processing SRX5252290-SRR8445246. (33/48)
2021-08-30 21:28:32 [INFO] Processing SRX5252290-SRR8445243. (34/48)
2021-08-30 21:28:35 [INFO] Processing SRX5252290-SRR8445247. (35/48)
2021-08-30 21:28:39 [INFO] Processing SRX5252290-SRR8445244. (36/48)
2021-08-30 21:28:42 [INFO] Processing SRX5252283. (7/8)
2021-08-30 21:28:42 [INFO] Processing SRX5252283-SRR8445202. (37/48)
2021-08-30 21:28:45 [INFO] Processing SRX5252283-SRR8445206. (38/48)
2021-08-30 21:28:49 [INFO] Processing SRX5252283-SRR8445204. (39/48)
2021-08-30 21:28:53 [INFO] Processing SRX5252283-SRR8445203. (40/48)
2021-08-30 21:28:59 [INFO] Writing to disk...
2021-08-30 21:29:03 [INFO] Processing SRX5252283-SRR8445201. (41/48)
2021-08-30 21:29:05 [INFO] Processing SRX5252283-SRR8445205. (42/48)
2021-08-30 21:29:10 [INFO] Processing SRX5252284. (8/8)
2021-08-30 21:29:10 [INFO] Processing SRX5252284-SRR8445208. (43/48)
2021-08-30 21:29:12 [INFO] Processing SRX5252284-SRR8445209. (44/48)
2021-08-30 21:29:16 [INFO] Processing SRX5252284-SRR8445207. (45/48)
2021-08-30 21:29:18 [INFO] Processing SRX5252284-SRR8445212. (46/48)
2021-08-30 21:29:23 [INFO] Processing SRX5252284-SRR8445210. (47/48)
2021-08-30 21:29:27 [INFO] Processing SRX5252284-SRR8445211. (48/48)
2021-08-30 21:29:32 [INFO] Writing to disk...
2021-08-30 21:29:34 [INFO] Finished.