2021-08-02 14:43:30 [INFO] Starting.
2021-08-02 14:43:30 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-02 14:43:30 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-02 14:43:30 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:30 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX5775995. (1/67)
2021-08-02 14:43:30 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-02 14:43:31 [INFO] Processing SRX5775965. (2/67)
2021-08-02 14:43:31 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-02 14:43:33 [INFO] Processing SRX5775976. (3/67)
2021-08-02 14:43:33 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-02 14:43:34 [INFO] Processing SRX5775969. (4/67)
2021-08-02 14:43:34 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-02 14:43:34 [INFO] Processing SRX5776003. (5/67)
2021-08-02 14:43:34 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-02 14:43:35 [INFO] Processing SRX5775959. (6/67)
2021-08-02 14:43:35 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-02 14:43:36 [INFO] Processing SRX5775994. (7/67)
2021-08-02 14:43:36 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-02 14:43:37 [INFO] Processing SRX5775988. (8/67)
2021-08-02 14:43:37 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-02 14:43:38 [INFO] Processing SRX5775987. (9/67)
2021-08-02 14:43:38 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-02 14:43:40 [INFO] Processing SRX5775962. (10/67)
2021-08-02 14:43:40 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-02 14:43:41 [INFO] Writing to disk...
2021-08-02 14:43:41 [INFO] Processing SRX5776008. (11/67)
2021-08-02 14:43:41 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-02 14:43:42 [INFO] Processing SRX5775964. (12/67)
2021-08-02 14:43:42 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-02 14:43:43 [INFO] Processing SRX5775957. (13/67)
2021-08-02 14:43:43 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-02 14:43:44 [INFO] Processing SRX5775978. (14/67)
2021-08-02 14:43:44 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-02 14:43:45 [INFO] Processing SRX5775972. (15/67)
2021-08-02 14:43:45 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-02 14:43:46 [INFO] Processing SRX5775977. (16/67)
2021-08-02 14:43:46 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-02 14:43:47 [INFO] Processing SRX5775991. (17/67)
2021-08-02 14:43:47 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-02 14:43:48 [INFO] Processing SRX5776010. (18/67)
2021-08-02 14:43:48 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-02 14:43:49 [INFO] Processing SRX5775990. (19/67)
2021-08-02 14:43:49 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-02 14:43:50 [INFO] Processing SRX5775981. (20/67)
2021-08-02 14:43:50 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-02 14:43:51 [INFO] Writing to disk...
2021-08-02 14:43:52 [INFO] Processing SRX5775983. (21/67)
2021-08-02 14:43:52 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-02 14:43:53 [INFO] Processing SRX5776014. (22/67)
2021-08-02 14:43:53 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-02 14:43:54 [INFO] Processing SRX5775955. (23/67)
2021-08-02 14:43:54 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-02 14:43:55 [INFO] Processing SRX5775980. (24/67)
2021-08-02 14:43:55 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-02 14:43:56 [INFO] Processing SRX5775968. (25/67)
2021-08-02 14:43:56 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-02 14:43:57 [INFO] Processing SRX5775966. (26/67)
2021-08-02 14:43:57 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-02 14:43:58 [INFO] Processing SRX5775985. (27/67)
2021-08-02 14:43:58 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-02 14:43:59 [INFO] Processing SRX5776012. (28/67)
2021-08-02 14:43:59 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-02 14:44:00 [INFO] Processing SRX5775993. (29/67)
2021-08-02 14:44:00 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-02 14:44:01 [INFO] Processing SRX5775979. (30/67)
2021-08-02 14:44:01 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-02 14:44:02 [INFO] Writing to disk...
2021-08-02 14:44:02 [INFO] Processing SRX5775951. (31/67)
2021-08-02 14:44:02 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-02 14:44:03 [INFO] Processing SRX5776011. (32/67)
2021-08-02 14:44:03 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-02 14:44:04 [INFO] Processing SRX5775954. (33/67)
2021-08-02 14:44:04 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-02 14:44:05 [INFO] Processing SRX5775950. (34/67)
2021-08-02 14:44:05 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-02 14:44:06 [INFO] Processing SRX5775949. (35/67)
2021-08-02 14:44:06 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-02 14:44:07 [INFO] Processing SRX5775982. (36/67)
2021-08-02 14:44:07 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-02 14:44:08 [INFO] Processing SRX5775953. (37/67)
2021-08-02 14:44:08 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-02 14:44:09 [INFO] Processing SRX5775975. (38/67)
2021-08-02 14:44:09 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-02 14:44:10 [INFO] Processing SRX5775992. (39/67)
2021-08-02 14:44:10 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-02 14:44:11 [INFO] Processing SRX5776015. (40/67)
2021-08-02 14:44:11 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-02 14:44:12 [INFO] Writing to disk...
2021-08-02 14:44:13 [INFO] Processing SRX5776013. (41/67)
2021-08-02 14:44:13 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-02 14:44:15 [INFO] Processing SRX5775984. (42/67)
2021-08-02 14:44:15 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-02 14:44:16 [INFO] Processing SRX5775996. (43/67)
2021-08-02 14:44:16 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-02 14:44:17 [INFO] Processing SRX5776007. (44/67)
2021-08-02 14:44:17 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-02 14:44:18 [INFO] Processing SRX5775989. (45/67)
2021-08-02 14:44:18 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-02 14:44:19 [INFO] Processing SRX5776000. (46/67)
2021-08-02 14:44:19 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-02 14:44:21 [INFO] Processing SRX5775967. (47/67)
2021-08-02 14:44:21 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-02 14:44:22 [INFO] Processing SRX5775974. (48/67)
2021-08-02 14:44:22 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-02 14:44:23 [INFO] Processing SRX5776004. (49/67)
2021-08-02 14:44:23 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-02 14:44:24 [INFO] Processing SRX5775961. (50/67)
2021-08-02 14:44:24 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-02 14:44:25 [INFO] Writing to disk...
2021-08-02 14:44:26 [INFO] Processing SRX5775952. (51/67)
2021-08-02 14:44:26 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-02 14:44:26 [INFO] Processing SRX5775998. (52/67)
2021-08-02 14:44:26 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-02 14:44:27 [INFO] Processing SRX5775960. (53/67)
2021-08-02 14:44:27 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-02 14:44:28 [INFO] Processing SRX5776005. (54/67)
2021-08-02 14:44:28 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-02 14:44:29 [INFO] Processing SRX5775986. (55/67)
2021-08-02 14:44:29 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-02 14:44:30 [INFO] Processing SRX5776009. (56/67)
2021-08-02 14:44:30 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-02 14:44:32 [INFO] Processing SRX5776006. (57/67)
2021-08-02 14:44:32 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-02 14:44:33 [INFO] Processing SRX5776002. (58/67)
2021-08-02 14:44:33 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-02 14:44:35 [INFO] Processing SRX5775956. (59/67)
2021-08-02 14:44:35 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-02 14:44:36 [INFO] Processing SRX5775997. (60/67)
2021-08-02 14:44:36 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-02 14:44:37 [INFO] Writing to disk...
2021-08-02 14:44:41 [INFO] Processing SRX5775971. (61/67)
2021-08-02 14:44:41 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-02 14:44:42 [INFO] Processing SRX5776001. (62/67)
2021-08-02 14:44:42 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-02 14:44:43 [INFO] Processing SRX5775999. (63/67)
2021-08-02 14:44:43 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-02 14:44:44 [INFO] Processing SRX5775963. (64/67)
2021-08-02 14:44:44 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-02 14:44:45 [INFO] Processing SRX5775970. (65/67)
2021-08-02 14:44:45 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-02 14:44:46 [INFO] Processing SRX5775973. (66/67)
2021-08-02 14:44:46 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-02 14:44:47 [INFO] Processing SRX5775958. (67/67)
2021-08-02 14:44:47 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-02 14:44:48 [INFO] Writing to disk...
2021-08-02 14:44:49 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX5775995. (1/67)
2021-08-12 14:31:21 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-12 14:31:22 [INFO] Processing SRX5775965. (2/67)
2021-08-12 14:31:22 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-12 14:31:24 [INFO] Processing SRX5775976. (3/67)
2021-08-12 14:31:24 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-12 14:31:24 [INFO] Processing SRX5775969. (4/67)
2021-08-12 14:31:24 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-12 14:31:25 [INFO] Processing SRX5776003. (5/67)
2021-08-12 14:31:25 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-12 14:31:26 [INFO] Processing SRX5775959. (6/67)
2021-08-12 14:31:26 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-12 14:31:27 [INFO] Processing SRX5775994. (7/67)
2021-08-12 14:31:27 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-12 14:31:28 [INFO] Processing SRX5775988. (8/67)
2021-08-12 14:31:28 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-12 14:31:28 [INFO] Processing SRX5775987. (9/67)
2021-08-12 14:31:28 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-12 14:31:29 [INFO] Processing SRX5775962. (10/67)
2021-08-12 14:31:29 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-12 14:31:30 [INFO] Writing to disk...
2021-08-12 14:31:31 [INFO] Processing SRX5776008. (11/67)
2021-08-12 14:31:31 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-12 14:31:32 [INFO] Processing SRX5775964. (12/67)
2021-08-12 14:31:32 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-12 14:31:33 [INFO] Processing SRX5775957. (13/67)
2021-08-12 14:31:33 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-12 14:31:34 [INFO] Processing SRX5775978. (14/67)
2021-08-12 14:31:34 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-12 14:31:35 [INFO] Processing SRX5775972. (15/67)
2021-08-12 14:31:35 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-12 14:31:36 [INFO] Processing SRX5775977. (16/67)
2021-08-12 14:31:36 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-12 14:31:36 [INFO] Processing SRX5775991. (17/67)
2021-08-12 14:31:36 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-12 14:31:37 [INFO] Processing SRX5776010. (18/67)
2021-08-12 14:31:37 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-12 14:31:38 [INFO] Processing SRX5775990. (19/67)
2021-08-12 14:31:38 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-12 14:31:40 [INFO] Processing SRX5775981. (20/67)
2021-08-12 14:31:40 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-12 14:31:40 [INFO] Writing to disk...
2021-08-12 14:31:41 [INFO] Processing SRX5775983. (21/67)
2021-08-12 14:31:41 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-12 14:31:42 [INFO] Processing SRX5776014. (22/67)
2021-08-12 14:31:42 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-12 14:31:43 [INFO] Processing SRX5775955. (23/67)
2021-08-12 14:31:43 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-12 14:31:44 [INFO] Processing SRX5775980. (24/67)
2021-08-12 14:31:44 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-12 14:31:45 [INFO] Processing SRX5775968. (25/67)
2021-08-12 14:31:45 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-12 14:31:46 [INFO] Processing SRX5775966. (26/67)
2021-08-12 14:31:46 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-12 14:31:47 [INFO] Processing SRX5775985. (27/67)
2021-08-12 14:31:47 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-12 14:31:48 [INFO] Processing SRX5776012. (28/67)
2021-08-12 14:31:48 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-12 14:31:49 [INFO] Processing SRX5775993. (29/67)
2021-08-12 14:31:49 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-12 14:31:50 [INFO] Processing SRX5775979. (30/67)
2021-08-12 14:31:50 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-12 14:31:51 [INFO] Writing to disk...
2021-08-12 14:31:51 [INFO] Processing SRX5775951. (31/67)
2021-08-12 14:31:51 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-12 14:31:52 [INFO] Processing SRX5776011. (32/67)
2021-08-12 14:31:52 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-12 14:31:53 [INFO] Processing SRX5775954. (33/67)
2021-08-12 14:31:53 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-12 14:31:54 [INFO] Processing SRX5775950. (34/67)
2021-08-12 14:31:54 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-12 14:31:55 [INFO] Processing SRX5775949. (35/67)
2021-08-12 14:31:55 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-12 14:31:56 [INFO] Processing SRX5775982. (36/67)
2021-08-12 14:31:56 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-12 14:31:57 [INFO] Processing SRX5775953. (37/67)
2021-08-12 14:31:57 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-12 14:31:57 [INFO] Processing SRX5775975. (38/67)
2021-08-12 14:31:57 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-12 14:31:58 [INFO] Processing SRX5775992. (39/67)
2021-08-12 14:31:58 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-12 14:31:59 [INFO] Processing SRX5776015. (40/67)
2021-08-12 14:31:59 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-12 14:32:00 [INFO] Writing to disk...
2021-08-12 14:32:01 [INFO] Processing SRX5776013. (41/67)
2021-08-12 14:32:01 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-12 14:32:03 [INFO] Processing SRX5775984. (42/67)
2021-08-12 14:32:03 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-12 14:32:04 [INFO] Processing SRX5775996. (43/67)
2021-08-12 14:32:04 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-12 14:32:05 [INFO] Processing SRX5776007. (44/67)
2021-08-12 14:32:05 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-12 14:32:07 [INFO] Processing SRX5775989. (45/67)
2021-08-12 14:32:07 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-12 14:32:07 [INFO] Processing SRX5776000. (46/67)
2021-08-12 14:32:07 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-12 14:32:09 [INFO] Processing SRX5775967. (47/67)
2021-08-12 14:32:09 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-12 14:32:10 [INFO] Processing SRX5775974. (48/67)
2021-08-12 14:32:10 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-12 14:32:10 [INFO] Processing SRX5776004. (49/67)
2021-08-12 14:32:10 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-12 14:32:12 [INFO] Processing SRX5775961. (50/67)
2021-08-12 14:32:12 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-12 14:32:13 [INFO] Writing to disk...
2021-08-12 14:32:14 [INFO] Processing SRX5775952. (51/67)
2021-08-12 14:32:14 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-12 14:32:14 [INFO] Processing SRX5775998. (52/67)
2021-08-12 14:32:14 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-12 14:32:15 [INFO] Processing SRX5775960. (53/67)
2021-08-12 14:32:15 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-12 14:32:16 [INFO] Processing SRX5776005. (54/67)
2021-08-12 14:32:16 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-12 14:32:17 [INFO] Processing SRX5775986. (55/67)
2021-08-12 14:32:17 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-12 14:32:18 [INFO] Processing SRX5776009. (56/67)
2021-08-12 14:32:18 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-12 14:32:20 [INFO] Processing SRX5776006. (57/67)
2021-08-12 14:32:20 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-12 14:32:21 [INFO] Processing SRX5776002. (58/67)
2021-08-12 14:32:21 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-12 14:32:23 [INFO] Processing SRX5775956. (59/67)
2021-08-12 14:32:23 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-12 14:32:24 [INFO] Processing SRX5775997. (60/67)
2021-08-12 14:32:24 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-12 14:32:25 [INFO] Writing to disk...
2021-08-12 14:32:26 [INFO] Processing SRX5775971. (61/67)
2021-08-12 14:32:26 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-12 14:32:26 [INFO] Processing SRX5776001. (62/67)
2021-08-12 14:32:26 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-12 14:32:27 [INFO] Processing SRX5775999. (63/67)
2021-08-12 14:32:27 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-12 14:32:28 [INFO] Processing SRX5775963. (64/67)
2021-08-12 14:32:28 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-12 14:32:29 [INFO] Processing SRX5775970. (65/67)
2021-08-12 14:32:29 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-12 14:32:30 [INFO] Processing SRX5775973. (66/67)
2021-08-12 14:32:30 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-12 14:32:31 [INFO] Processing SRX5775958. (67/67)
2021-08-12 14:32:31 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-12 14:32:32 [INFO] Writing to disk...
2021-08-12 14:32:33 [INFO] Finished.
2021-08-12 16:34:16 [INFO] Starting.
2021-08-12 16:34:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-12 16:34:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-12 16:34:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:17 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:17 [INFO] Writing every 10 Runs.
2021-08-12 16:34:17 [INFO] Processing SRX5775995. (1/67)
2021-08-12 16:34:17 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-12 16:34:18 [INFO] Processing SRX5775965. (2/67)
2021-08-12 16:34:18 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-12 16:34:20 [INFO] Processing SRX5775976. (3/67)
2021-08-12 16:34:20 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-12 16:34:21 [INFO] Processing SRX5775969. (4/67)
2021-08-12 16:34:21 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-12 16:34:22 [INFO] Processing SRX5776003. (5/67)
2021-08-12 16:34:22 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-12 16:34:23 [INFO] Processing SRX5775959. (6/67)
2021-08-12 16:34:23 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-12 16:34:24 [INFO] Processing SRX5775994. (7/67)
2021-08-12 16:34:24 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-12 16:34:25 [INFO] Processing SRX5775988. (8/67)
2021-08-12 16:34:25 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-12 16:34:27 [INFO] Processing SRX5775987. (9/67)
2021-08-12 16:34:27 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-12 16:34:28 [INFO] Processing SRX5775962. (10/67)
2021-08-12 16:34:28 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-12 16:34:29 [INFO] Writing to disk...
2021-08-12 16:34:30 [INFO] Processing SRX5776008. (11/67)
2021-08-12 16:34:30 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-12 16:34:31 [INFO] Processing SRX5775964. (12/67)
2021-08-12 16:34:31 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-12 16:34:33 [INFO] Processing SRX5775957. (13/67)
2021-08-12 16:34:33 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-12 16:34:34 [INFO] Processing SRX5775978. (14/67)
2021-08-12 16:34:34 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-12 16:34:35 [INFO] Processing SRX5775972. (15/67)
2021-08-12 16:34:35 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-12 16:34:36 [INFO] Processing SRX5775977. (16/67)
2021-08-12 16:34:36 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-12 16:34:37 [INFO] Processing SRX5775991. (17/67)
2021-08-12 16:34:37 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-12 16:34:38 [INFO] Processing SRX5776010. (18/67)
2021-08-12 16:34:38 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-12 16:34:40 [INFO] Processing SRX5775990. (19/67)
2021-08-12 16:34:40 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-12 16:34:42 [INFO] Processing SRX5775981. (20/67)
2021-08-12 16:34:42 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-12 16:34:42 [INFO] Writing to disk...
2021-08-12 16:34:45 [INFO] Processing SRX5775983. (21/67)
2021-08-12 16:34:45 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-12 16:34:46 [INFO] Processing SRX5776014. (22/67)
2021-08-12 16:34:46 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-12 16:34:47 [INFO] Processing SRX5775955. (23/67)
2021-08-12 16:34:47 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-12 16:34:49 [INFO] Processing SRX5775980. (24/67)
2021-08-12 16:34:49 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-12 16:34:50 [INFO] Processing SRX5775968. (25/67)
2021-08-12 16:34:50 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-12 16:34:51 [INFO] Processing SRX5775966. (26/67)
2021-08-12 16:34:51 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-12 16:34:53 [INFO] Processing SRX5775985. (27/67)
2021-08-12 16:34:53 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-12 16:34:54 [INFO] Processing SRX5776012. (28/67)
2021-08-12 16:34:54 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-12 16:34:56 [INFO] Processing SRX5775993. (29/67)
2021-08-12 16:34:56 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-12 16:34:57 [INFO] Processing SRX5775979. (30/67)
2021-08-12 16:34:57 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-12 16:34:58 [INFO] Writing to disk...
2021-08-12 16:35:02 [INFO] Processing SRX5775951. (31/67)
2021-08-12 16:35:02 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-12 16:35:03 [INFO] Processing SRX5776011. (32/67)
2021-08-12 16:35:03 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-12 16:35:05 [INFO] Processing SRX5775954. (33/67)
2021-08-12 16:35:05 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-12 16:35:06 [INFO] Processing SRX5775950. (34/67)
2021-08-12 16:35:06 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-12 16:35:08 [INFO] Processing SRX5775949. (35/67)
2021-08-12 16:35:08 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-12 16:35:09 [INFO] Processing SRX5775982. (36/67)
2021-08-12 16:35:09 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-12 16:35:10 [INFO] Processing SRX5775953. (37/67)
2021-08-12 16:35:10 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-12 16:35:12 [INFO] Processing SRX5775975. (38/67)
2021-08-12 16:35:12 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-12 16:35:13 [INFO] Processing SRX5775992. (39/67)
2021-08-12 16:35:13 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-12 16:35:14 [INFO] Processing SRX5776015. (40/67)
2021-08-12 16:35:14 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-12 16:35:15 [INFO] Writing to disk...
2021-08-12 16:35:22 [INFO] Processing SRX5776013. (41/67)
2021-08-12 16:35:22 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-12 16:35:24 [INFO] Processing SRX5775984. (42/67)
2021-08-12 16:35:24 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-12 16:35:26 [INFO] Processing SRX5775996. (43/67)
2021-08-12 16:35:26 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-12 16:35:27 [INFO] Processing SRX5776007. (44/67)
2021-08-12 16:35:27 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-12 16:35:29 [INFO] Processing SRX5775989. (45/67)
2021-08-12 16:35:29 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-12 16:35:30 [INFO] Processing SRX5776000. (46/67)
2021-08-12 16:35:30 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-12 16:35:31 [INFO] Processing SRX5775967. (47/67)
2021-08-12 16:35:31 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-12 16:35:33 [INFO] Processing SRX5775974. (48/67)
2021-08-12 16:35:33 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-12 16:35:33 [INFO] Processing SRX5776004. (49/67)
2021-08-12 16:35:33 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-12 16:35:35 [INFO] Processing SRX5775961. (50/67)
2021-08-12 16:35:35 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-12 16:35:36 [INFO] Writing to disk...
2021-08-12 16:35:46 [INFO] Processing SRX5775952. (51/67)
2021-08-12 16:35:46 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-12 16:35:48 [INFO] Processing SRX5775998. (52/67)
2021-08-12 16:35:48 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-12 16:35:49 [INFO] Processing SRX5775960. (53/67)
2021-08-12 16:35:49 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-12 16:35:50 [INFO] Processing SRX5776005. (54/67)
2021-08-12 16:35:50 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-12 16:35:51 [INFO] Processing SRX5775986. (55/67)
2021-08-12 16:35:51 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-12 16:35:53 [INFO] Processing SRX5776009. (56/67)
2021-08-12 16:35:53 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-12 16:35:55 [INFO] Processing SRX5776006. (57/67)
2021-08-12 16:35:55 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-12 16:35:57 [INFO] Processing SRX5776002. (58/67)
2021-08-12 16:35:57 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-12 16:35:58 [INFO] Processing SRX5775956. (59/67)
2021-08-12 16:35:58 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-12 16:36:00 [INFO] Processing SRX5775997. (60/67)
2021-08-12 16:36:00 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-12 16:36:01 [INFO] Writing to disk...
2021-08-12 16:36:10 [INFO] Processing SRX5775971. (61/67)
2021-08-12 16:36:10 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-12 16:36:11 [INFO] Processing SRX5776001. (62/67)
2021-08-12 16:36:11 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-12 16:36:12 [INFO] Processing SRX5775999. (63/67)
2021-08-12 16:36:12 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-12 16:36:14 [INFO] Processing SRX5775963. (64/67)
2021-08-12 16:36:14 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-12 16:36:15 [INFO] Processing SRX5775970. (65/67)
2021-08-12 16:36:15 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-12 16:36:16 [INFO] Processing SRX5775973. (66/67)
2021-08-12 16:36:16 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-12 16:36:18 [INFO] Processing SRX5775958. (67/67)
2021-08-12 16:36:18 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-12 16:36:19 [INFO] Writing to disk...
2021-08-12 16:36:21 [INFO] Finished.
2021-08-13 09:44:54 [INFO] Starting.
2021-08-13 09:44:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-13 09:44:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-13 09:44:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:54 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:54 [INFO] Writing every 10 Runs.
2021-08-13 09:44:54 [INFO] Processing SRX5775995. (1/67)
2021-08-13 09:44:54 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-13 09:44:55 [INFO] Processing SRX5775965. (2/67)
2021-08-13 09:44:55 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-13 09:44:57 [INFO] Processing SRX5775976. (3/67)
2021-08-13 09:44:57 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-13 09:44:58 [INFO] Processing SRX5775969. (4/67)
2021-08-13 09:44:58 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-13 09:44:59 [INFO] Processing SRX5776003. (5/67)
2021-08-13 09:44:59 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-13 09:45:00 [INFO] Processing SRX5775959. (6/67)
2021-08-13 09:45:00 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-13 09:45:01 [INFO] Processing SRX5775994. (7/67)
2021-08-13 09:45:01 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-13 09:45:02 [INFO] Processing SRX5775988. (8/67)
2021-08-13 09:45:02 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-13 09:45:03 [INFO] Processing SRX5775987. (9/67)
2021-08-13 09:45:03 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-13 09:45:04 [INFO] Processing SRX5775962. (10/67)
2021-08-13 09:45:04 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-13 09:45:05 [INFO] Writing to disk...
2021-08-13 09:45:06 [INFO] Processing SRX5776008. (11/67)
2021-08-13 09:45:06 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-13 09:45:07 [INFO] Processing SRX5775964. (12/67)
2021-08-13 09:45:07 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-13 09:45:08 [INFO] Processing SRX5775957. (13/67)
2021-08-13 09:45:08 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-13 09:45:10 [INFO] Processing SRX5775978. (14/67)
2021-08-13 09:45:10 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-13 09:45:11 [INFO] Processing SRX5775972. (15/67)
2021-08-13 09:45:11 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-13 09:45:12 [INFO] Processing SRX5775977. (16/67)
2021-08-13 09:45:12 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-13 09:45:13 [INFO] Processing SRX5775991. (17/67)
2021-08-13 09:45:13 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-13 09:45:14 [INFO] Processing SRX5776010. (18/67)
2021-08-13 09:45:14 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-13 09:45:15 [INFO] Processing SRX5775990. (19/67)
2021-08-13 09:45:15 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-13 09:45:16 [INFO] Processing SRX5775981. (20/67)
2021-08-13 09:45:16 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-13 09:45:17 [INFO] Writing to disk...
2021-08-13 09:45:22 [INFO] Processing SRX5775983. (21/67)
2021-08-13 09:45:22 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-13 09:45:23 [INFO] Processing SRX5776014. (22/67)
2021-08-13 09:45:23 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-13 09:45:24 [INFO] Processing SRX5775955. (23/67)
2021-08-13 09:45:24 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-13 09:45:25 [INFO] Processing SRX5775980. (24/67)
2021-08-13 09:45:25 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-13 09:45:26 [INFO] Processing SRX5775968. (25/67)
2021-08-13 09:45:26 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-13 09:45:27 [INFO] Processing SRX5775966. (26/67)
2021-08-13 09:45:27 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-13 09:45:28 [INFO] Processing SRX5775985. (27/67)
2021-08-13 09:45:28 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-13 09:45:29 [INFO] Processing SRX5776012. (28/67)
2021-08-13 09:45:29 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-13 09:45:32 [INFO] Processing SRX5775993. (29/67)
2021-08-13 09:45:32 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-13 09:45:33 [INFO] Processing SRX5775979. (30/67)
2021-08-13 09:45:33 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-13 09:45:34 [INFO] Writing to disk...
2021-08-13 09:45:38 [INFO] Processing SRX5775951. (31/67)
2021-08-13 09:45:38 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-13 09:45:39 [INFO] Processing SRX5776011. (32/67)
2021-08-13 09:45:39 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-13 09:45:41 [INFO] Processing SRX5775954. (33/67)
2021-08-13 09:45:41 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-13 09:45:43 [INFO] Processing SRX5775950. (34/67)
2021-08-13 09:45:43 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-13 09:45:44 [INFO] Processing SRX5775949. (35/67)
2021-08-13 09:45:44 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-13 09:45:45 [INFO] Processing SRX5775982. (36/67)
2021-08-13 09:45:45 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-13 09:45:46 [INFO] Processing SRX5775953. (37/67)
2021-08-13 09:45:46 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-13 09:45:47 [INFO] Processing SRX5775975. (38/67)
2021-08-13 09:45:47 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-13 09:45:48 [INFO] Processing SRX5775992. (39/67)
2021-08-13 09:45:48 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-13 09:45:49 [INFO] Processing SRX5776015. (40/67)
2021-08-13 09:45:49 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-13 09:45:50 [INFO] Writing to disk...
2021-08-13 09:45:56 [INFO] Processing SRX5776013. (41/67)
2021-08-13 09:45:56 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-13 09:45:58 [INFO] Processing SRX5775984. (42/67)
2021-08-13 09:45:58 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-13 09:45:59 [INFO] Processing SRX5775996. (43/67)
2021-08-13 09:45:59 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-13 09:46:00 [INFO] Processing SRX5776007. (44/67)
2021-08-13 09:46:00 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-13 09:46:01 [INFO] Processing SRX5775989. (45/67)
2021-08-13 09:46:01 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-13 09:46:02 [INFO] Processing SRX5776000. (46/67)
2021-08-13 09:46:02 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-13 09:46:05 [INFO] Processing SRX5775967. (47/67)
2021-08-13 09:46:05 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-13 09:46:06 [INFO] Processing SRX5775974. (48/67)
2021-08-13 09:46:06 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-13 09:46:07 [INFO] Processing SRX5776004. (49/67)
2021-08-13 09:46:07 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-13 09:46:08 [INFO] Processing SRX5775961. (50/67)
2021-08-13 09:46:08 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-13 09:46:09 [INFO] Writing to disk...
2021-08-13 09:46:15 [INFO] Processing SRX5775952. (51/67)
2021-08-13 09:46:15 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-13 09:46:16 [INFO] Processing SRX5775998. (52/67)
2021-08-13 09:46:16 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-13 09:46:17 [INFO] Processing SRX5775960. (53/67)
2021-08-13 09:46:17 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-13 09:46:18 [INFO] Processing SRX5776005. (54/67)
2021-08-13 09:46:18 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-13 09:46:19 [INFO] Processing SRX5775986. (55/67)
2021-08-13 09:46:19 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-13 09:46:20 [INFO] Processing SRX5776009. (56/67)
2021-08-13 09:46:20 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-13 09:46:22 [INFO] Processing SRX5776006. (57/67)
2021-08-13 09:46:22 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-13 09:46:23 [INFO] Processing SRX5776002. (58/67)
2021-08-13 09:46:23 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-13 09:46:26 [INFO] Processing SRX5775956. (59/67)
2021-08-13 09:46:26 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-13 09:46:27 [INFO] Processing SRX5775997. (60/67)
2021-08-13 09:46:27 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-13 09:46:29 [INFO] Writing to disk...
2021-08-13 09:46:33 [INFO] Processing SRX5775971. (61/67)
2021-08-13 09:46:33 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-13 09:46:34 [INFO] Processing SRX5776001. (62/67)
2021-08-13 09:46:34 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-13 09:46:35 [INFO] Processing SRX5775999. (63/67)
2021-08-13 09:46:35 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-13 09:46:37 [INFO] Processing SRX5775963. (64/67)
2021-08-13 09:46:37 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-13 09:46:39 [INFO] Processing SRX5775970. (65/67)
2021-08-13 09:46:39 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-13 09:46:40 [INFO] Processing SRX5775973. (66/67)
2021-08-13 09:46:40 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-13 09:46:41 [INFO] Processing SRX5775958. (67/67)
2021-08-13 09:46:41 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-13 09:46:42 [INFO] Writing to disk...
2021-08-13 09:46:48 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX5775995. (1/67)
2021-08-13 17:23:02 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-13 17:23:03 [INFO] Processing SRX5775965. (2/67)
2021-08-13 17:23:03 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-13 17:23:06 [INFO] Processing SRX5775976. (3/67)
2021-08-13 17:23:06 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-13 17:23:07 [INFO] Processing SRX5775969. (4/67)
2021-08-13 17:23:07 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-13 17:23:09 [INFO] Processing SRX5776003. (5/67)
2021-08-13 17:23:09 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-13 17:23:11 [INFO] Processing SRX5775959. (6/67)
2021-08-13 17:23:11 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-13 17:23:13 [INFO] Processing SRX5775994. (7/67)
2021-08-13 17:23:13 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-13 17:23:14 [INFO] Processing SRX5775988. (8/67)
2021-08-13 17:23:14 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-13 17:23:16 [INFO] Processing SRX5775987. (9/67)
2021-08-13 17:23:16 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-13 17:23:17 [INFO] Processing SRX5775962. (10/67)
2021-08-13 17:23:17 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-13 17:23:19 [INFO] Writing to disk...
2021-08-13 17:23:20 [INFO] Processing SRX5776008. (11/67)
2021-08-13 17:23:20 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-13 17:23:22 [INFO] Processing SRX5775964. (12/67)
2021-08-13 17:23:22 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-13 17:23:24 [INFO] Processing SRX5775957. (13/67)
2021-08-13 17:23:24 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-13 17:23:25 [INFO] Processing SRX5775978. (14/67)
2021-08-13 17:23:25 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-13 17:23:27 [INFO] Processing SRX5775972. (15/67)
2021-08-13 17:23:27 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-13 17:23:29 [INFO] Processing SRX5775977. (16/67)
2021-08-13 17:23:29 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-13 17:23:30 [INFO] Processing SRX5775991. (17/67)
2021-08-13 17:23:30 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-13 17:23:32 [INFO] Processing SRX5776010. (18/67)
2021-08-13 17:23:32 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-13 17:23:34 [INFO] Processing SRX5775990. (19/67)
2021-08-13 17:23:34 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-13 17:23:36 [INFO] Processing SRX5775981. (20/67)
2021-08-13 17:23:36 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-13 17:23:37 [INFO] Writing to disk...
2021-08-13 17:23:38 [INFO] Processing SRX5775983. (21/67)
2021-08-13 17:23:38 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-13 17:23:40 [INFO] Processing SRX5776014. (22/67)
2021-08-13 17:23:40 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-13 17:23:42 [INFO] Processing SRX5775955. (23/67)
2021-08-13 17:23:42 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-13 17:23:44 [INFO] Processing SRX5775980. (24/67)
2021-08-13 17:23:44 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-13 17:23:45 [INFO] Processing SRX5775968. (25/67)
2021-08-13 17:23:45 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-13 17:23:47 [INFO] Processing SRX5775966. (26/67)
2021-08-13 17:23:47 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-13 17:23:49 [INFO] Processing SRX5775985. (27/67)
2021-08-13 17:23:49 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-13 17:23:50 [INFO] Processing SRX5776012. (28/67)
2021-08-13 17:23:50 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-13 17:23:53 [INFO] Processing SRX5775993. (29/67)
2021-08-13 17:23:53 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-13 17:23:54 [INFO] Processing SRX5775979. (30/67)
2021-08-13 17:23:54 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-13 17:23:56 [INFO] Writing to disk...
2021-08-13 17:23:57 [INFO] Processing SRX5775951. (31/67)
2021-08-13 17:23:57 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-13 17:23:58 [INFO] Processing SRX5776011. (32/67)
2021-08-13 17:23:58 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-13 17:24:01 [INFO] Processing SRX5775954. (33/67)
2021-08-13 17:24:01 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-13 17:24:02 [INFO] Processing SRX5775950. (34/67)
2021-08-13 17:24:02 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-13 17:24:04 [INFO] Processing SRX5775949. (35/67)
2021-08-13 17:24:04 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-13 17:24:06 [INFO] Processing SRX5775982. (36/67)
2021-08-13 17:24:06 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-13 17:24:08 [INFO] Processing SRX5775953. (37/67)
2021-08-13 17:24:08 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-13 17:24:10 [INFO] Processing SRX5775975. (38/67)
2021-08-13 17:24:10 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-13 17:24:11 [INFO] Processing SRX5775992. (39/67)
2021-08-13 17:24:11 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-13 17:24:13 [INFO] Processing SRX5776015. (40/67)
2021-08-13 17:24:13 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-13 17:24:15 [INFO] Writing to disk...
2021-08-13 17:24:16 [INFO] Processing SRX5776013. (41/67)
2021-08-13 17:24:16 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-13 17:24:19 [INFO] Processing SRX5775984. (42/67)
2021-08-13 17:24:19 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-13 17:24:20 [INFO] Processing SRX5775996. (43/67)
2021-08-13 17:24:20 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-13 17:24:22 [INFO] Processing SRX5776007. (44/67)
2021-08-13 17:24:22 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-13 17:24:24 [INFO] Processing SRX5775989. (45/67)
2021-08-13 17:24:24 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-13 17:24:26 [INFO] Processing SRX5776000. (46/67)
2021-08-13 17:24:26 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-13 17:24:28 [INFO] Processing SRX5775967. (47/67)
2021-08-13 17:24:28 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-13 17:24:30 [INFO] Processing SRX5775974. (48/67)
2021-08-13 17:24:30 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-13 17:24:32 [INFO] Processing SRX5776004. (49/67)
2021-08-13 17:24:32 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-13 17:24:34 [INFO] Processing SRX5775961. (50/67)
2021-08-13 17:24:34 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-13 17:24:36 [INFO] Writing to disk...
2021-08-13 17:24:37 [INFO] Processing SRX5775952. (51/67)
2021-08-13 17:24:37 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-13 17:24:39 [INFO] Processing SRX5775998. (52/67)
2021-08-13 17:24:39 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-13 17:24:41 [INFO] Processing SRX5775960. (53/67)
2021-08-13 17:24:41 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-13 17:24:42 [INFO] Processing SRX5776005. (54/67)
2021-08-13 17:24:42 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-13 17:24:44 [INFO] Processing SRX5775986. (55/67)
2021-08-13 17:24:44 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-13 17:24:46 [INFO] Processing SRX5776009. (56/67)
2021-08-13 17:24:46 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-13 17:24:49 [INFO] Processing SRX5776006. (57/67)
2021-08-13 17:24:49 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-13 17:24:52 [INFO] Processing SRX5776002. (58/67)
2021-08-13 17:24:52 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-13 17:24:54 [INFO] Processing SRX5775956. (59/67)
2021-08-13 17:24:54 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-13 17:24:56 [INFO] Processing SRX5775997. (60/67)
2021-08-13 17:24:56 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-13 17:24:58 [INFO] Writing to disk...
2021-08-13 17:25:00 [INFO] Processing SRX5775971. (61/67)
2021-08-13 17:25:00 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-13 17:25:01 [INFO] Processing SRX5776001. (62/67)
2021-08-13 17:25:01 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-13 17:25:03 [INFO] Processing SRX5775999. (63/67)
2021-08-13 17:25:03 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-13 17:25:05 [INFO] Processing SRX5775963. (64/67)
2021-08-13 17:25:05 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-13 17:25:07 [INFO] Processing SRX5775970. (65/67)
2021-08-13 17:25:07 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-13 17:25:09 [INFO] Processing SRX5775973. (66/67)
2021-08-13 17:25:09 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-13 17:25:11 [INFO] Processing SRX5775958. (67/67)
2021-08-13 17:25:11 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-13 17:25:13 [INFO] Writing to disk...
2021-08-13 17:25:14 [INFO] Finished.
2021-08-16 11:36:51 [INFO] Starting.
2021-08-16 11:36:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-16 11:36:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-16 11:36:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:52 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:52 [INFO] Writing every 10 Runs.
2021-08-16 11:36:52 [INFO] Processing SRX5775995. (1/67)
2021-08-16 11:36:52 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-16 12:37:59 [INFO] Processing SRX5775965. (2/67)
2021-08-16 12:37:59 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-16 12:52:13 [ERROR] Adding SRR8997168:chr18_vs_chr5 to in memory aggregate failed. Error message:
Traceback (most recent call last):
  File "/grid/gillis/data/nfox/hi_c_data_processing/software/aggregate.py", line 445, in add_dataset
    aggregate_data[c] = aggregate_data[c] + net
  File "/grid/gillis/home/nfox/software/miniconda3/lib/python3.8/site-packages/scipy/sparse/base.py", line 415, in __add__
    return self._add_sparse(other)
  File "/grid/gillis/home/nfox/software/miniconda3/lib/python3.8/site-packages/scipy/sparse/compressed.py", line 359, in _add_sparse
    return self._binopt(other, '_plus_')
  File "/grid/gillis/home/nfox/software/miniconda3/lib/python3.8/site-packages/scipy/sparse/compressed.py", line 1226, in _binopt
    indptr = np.empty(self.indptr.shape, dtype=idx_dtype)
MemoryError: Unable to allocate 346. MiB for an array with shape (90702640,) and data type int32

2021-08-16 16:36:44 [INFO] Starting.
2021-08-16 16:36:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-16 16:36:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-16 16:36:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 16:36:44 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 16:36:44 [INFO] Writing every 10 Runs.
2021-08-16 16:36:44 [INFO] Processing SRX5775995. (1/67)
2021-08-16 16:36:44 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-16 16:39:07 [INFO] Processing SRX5775965. (2/67)
2021-08-16 16:39:07 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-16 16:44:30 [INFO] Processing SRX5775976. (3/67)
2021-08-16 16:44:30 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-16 16:49:54 [INFO] Processing SRX5775969. (4/67)
2021-08-16 16:49:54 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-16 16:55:07 [INFO] Processing SRX5776003. (5/67)
2021-08-16 16:55:07 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-16 17:00:28 [INFO] Processing SRX5775959. (6/67)
2021-08-16 17:00:28 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-16 17:05:23 [INFO] Processing SRX5775994. (7/67)
2021-08-16 17:05:23 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-16 17:10:40 [INFO] Processing SRX5775988. (8/67)
2021-08-16 17:10:40 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-16 17:15:46 [INFO] Processing SRX5775987. (9/67)
2021-08-16 17:15:46 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-16 17:20:53 [INFO] Processing SRX5775962. (10/67)
2021-08-16 17:20:53 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-16 17:26:07 [INFO] Writing to disk...
2021-08-16 17:26:36 [INFO] Processing SRX5776008. (11/67)
2021-08-16 17:26:36 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-16 17:31:30 [INFO] Processing SRX5775964. (12/67)
2021-08-16 17:31:30 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-16 17:36:41 [INFO] Processing SRX5775957. (13/67)
2021-08-16 17:36:41 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-16 17:41:53 [INFO] Processing SRX5775978. (14/67)
2021-08-16 17:41:53 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-16 17:47:02 [INFO] Processing SRX5775972. (15/67)
2021-08-16 17:47:02 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-16 17:52:21 [INFO] Processing SRX5775977. (16/67)
2021-08-16 17:52:21 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-16 17:57:36 [INFO] Processing SRX5775991. (17/67)
2021-08-16 17:57:36 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-16 18:05:00 [INFO] Processing SRX5776010. (18/67)
2021-08-16 18:05:00 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-16 18:12:51 [INFO] Processing SRX5775990. (19/67)
2021-08-16 18:12:51 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-16 18:20:11 [INFO] Processing SRX5775981. (20/67)
2021-08-16 18:20:11 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-16 18:27:45 [INFO] Writing to disk...
2021-08-16 18:28:45 [INFO] Processing SRX5775983. (21/67)
2021-08-16 18:28:45 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-16 18:37:19 [INFO] Processing SRX5776014. (22/67)
2021-08-16 18:37:19 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-16 18:44:38 [INFO] Processing SRX5775955. (23/67)
2021-08-16 18:44:38 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-16 18:52:43 [INFO] Processing SRX5775980. (24/67)
2021-08-16 18:52:43 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-16 18:58:43 [INFO] Processing SRX5775968. (25/67)
2021-08-16 18:58:43 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-16 19:03:55 [INFO] Processing SRX5775966. (26/67)
2021-08-16 19:03:55 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-16 19:10:10 [INFO] Processing SRX5775985. (27/67)
2021-08-16 19:10:10 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-16 19:16:17 [INFO] Processing SRX5776012. (28/67)
2021-08-16 19:16:17 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-16 19:23:35 [INFO] Processing SRX5775993. (29/67)
2021-08-16 19:23:35 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-16 19:30:04 [INFO] Processing SRX5775979. (30/67)
2021-08-16 19:30:04 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-16 19:36:21 [INFO] Writing to disk...
2021-08-16 19:37:13 [INFO] Processing SRX5775951. (31/67)
2021-08-16 19:37:13 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-16 19:43:36 [INFO] Processing SRX5776011. (32/67)
2021-08-16 19:43:36 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-16 19:50:05 [INFO] Processing SRX5775954. (33/67)
2021-08-16 19:50:05 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-16 19:56:21 [INFO] Processing SRX5775950. (34/67)
2021-08-16 19:56:21 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-16 20:02:14 [INFO] Processing SRX5775949. (35/67)
2021-08-16 20:02:15 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-16 20:08:50 [INFO] Processing SRX5775982. (36/67)
2021-08-16 20:08:50 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-16 20:14:34 [INFO] Processing SRX5775953. (37/67)
2021-08-16 20:14:34 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-16 20:20:51 [INFO] Processing SRX5775975. (38/67)
2021-08-16 20:20:51 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-16 20:26:46 [INFO] Processing SRX5775992. (39/67)
2021-08-16 20:26:46 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-16 20:33:29 [INFO] Processing SRX5776015. (40/67)
2021-08-16 20:33:29 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-16 20:40:49 [INFO] Writing to disk...
2021-08-16 20:41:31 [INFO] Processing SRX5776013. (41/67)
2021-08-16 20:41:31 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-16 20:47:46 [INFO] Processing SRX5775984. (42/67)
2021-08-16 20:47:46 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-16 20:54:12 [INFO] Processing SRX5775996. (43/67)
2021-08-16 20:54:12 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-16 21:00:48 [INFO] Processing SRX5776007. (44/67)
2021-08-16 21:00:48 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-16 21:06:49 [INFO] Processing SRX5775989. (45/67)
2021-08-16 21:06:49 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-16 21:16:06 [INFO] Processing SRX5776000. (46/67)
2021-08-16 21:16:06 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-16 21:23:18 [INFO] Processing SRX5775967. (47/67)
2021-08-16 21:23:18 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-16 21:28:26 [INFO] Processing SRX5775974. (48/67)
2021-08-16 21:28:26 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-16 21:33:30 [INFO] Processing SRX5776004. (49/67)
2021-08-16 21:33:30 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-16 21:38:27 [INFO] Processing SRX5775961. (50/67)
2021-08-16 21:38:27 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-16 21:43:37 [INFO] Writing to disk...
2021-08-16 21:44:22 [INFO] Processing SRX5775952. (51/67)
2021-08-16 21:44:22 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-16 21:49:27 [INFO] Processing SRX5775998. (52/67)
2021-08-16 21:49:27 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-16 21:54:34 [INFO] Processing SRX5775960. (53/67)
2021-08-16 21:54:34 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-16 21:59:33 [INFO] Processing SRX5776005. (54/67)
2021-08-16 21:59:33 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-16 22:04:42 [INFO] Processing SRX5775986. (55/67)
2021-08-16 22:04:42 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-16 22:09:56 [INFO] Processing SRX5776009. (56/67)
2021-08-16 22:09:56 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-16 22:15:11 [INFO] Processing SRX5776006. (57/67)
2021-08-16 22:15:11 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-16 22:20:30 [INFO] Processing SRX5776002. (58/67)
2021-08-16 22:20:30 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-16 22:25:51 [INFO] Processing SRX5775956. (59/67)
2021-08-16 22:25:51 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-16 22:31:04 [INFO] Processing SRX5775997. (60/67)
2021-08-16 22:31:04 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-16 22:36:24 [INFO] Writing to disk...
2021-08-16 22:37:07 [INFO] Processing SRX5775971. (61/67)
2021-08-16 22:37:07 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-16 22:42:24 [INFO] Processing SRX5776001. (62/67)
2021-08-16 22:42:24 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-16 22:47:31 [INFO] Processing SRX5775999. (63/67)
2021-08-16 22:47:31 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-16 22:52:48 [INFO] Processing SRX5775963. (64/67)
2021-08-16 22:52:48 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-16 22:58:04 [INFO] Processing SRX5775970. (65/67)
2021-08-16 22:58:04 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-16 23:03:18 [INFO] Processing SRX5775973. (66/67)
2021-08-16 23:03:18 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-16 23:08:38 [INFO] Processing SRX5775958. (67/67)
2021-08-16 23:08:38 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-16 23:13:39 [INFO] Writing to disk...
2021-08-16 23:14:23 [INFO] Finished.
2021-08-23 13:34:05 [INFO] Starting.
2021-08-23 13:34:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-23 13:34:05 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-23 13:34:05 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:06 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:06 [INFO] Writing every 10 Runs.
2021-08-23 13:34:06 [INFO] Processing SRX5775995. (1/67)
2021-08-23 13:34:06 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-23 13:34:06 [INFO] Processing SRX5775965. (2/67)
2021-08-23 13:34:06 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-23 13:34:07 [INFO] Processing SRX5775976. (3/67)
2021-08-23 13:34:07 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-23 13:34:07 [INFO] Processing SRX5775969. (4/67)
2021-08-23 13:34:07 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-23 13:34:08 [INFO] Processing SRX5776003. (5/67)
2021-08-23 13:34:08 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-23 13:34:08 [INFO] Processing SRX5775959. (6/67)
2021-08-23 13:34:08 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-23 13:34:09 [INFO] Processing SRX5775994. (7/67)
2021-08-23 13:34:09 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-23 13:34:10 [INFO] Processing SRX5775988. (8/67)
2021-08-23 13:34:10 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-23 13:34:10 [INFO] Processing SRX5775987. (9/67)
2021-08-23 13:34:10 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-23 13:34:11 [INFO] Processing SRX5775962. (10/67)
2021-08-23 13:34:11 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-23 13:34:12 [INFO] Writing to disk...
2021-08-23 13:34:12 [INFO] Processing SRX5776008. (11/67)
2021-08-23 13:34:12 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-23 13:34:13 [INFO] Processing SRX5775964. (12/67)
2021-08-23 13:34:13 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-23 13:34:14 [INFO] Processing SRX5775957. (13/67)
2021-08-23 13:34:14 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-23 13:34:15 [INFO] Processing SRX5775978. (14/67)
2021-08-23 13:34:15 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-23 13:34:15 [INFO] Processing SRX5775972. (15/67)
2021-08-23 13:34:15 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-23 13:34:16 [INFO] Processing SRX5775977. (16/67)
2021-08-23 13:34:16 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-23 13:34:16 [INFO] Processing SRX5775991. (17/67)
2021-08-23 13:34:16 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-23 13:34:17 [INFO] Processing SRX5776010. (18/67)
2021-08-23 13:34:17 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-23 13:34:18 [INFO] Processing SRX5775990. (19/67)
2021-08-23 13:34:18 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-23 13:34:19 [INFO] Processing SRX5775981. (20/67)
2021-08-23 13:34:19 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-23 13:34:19 [INFO] Writing to disk...
2021-08-23 13:34:20 [INFO] Processing SRX5775983. (21/67)
2021-08-23 13:34:20 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-23 13:34:20 [INFO] Processing SRX5776014. (22/67)
2021-08-23 13:34:20 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-23 13:34:21 [INFO] Processing SRX5775955. (23/67)
2021-08-23 13:34:21 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-23 13:34:22 [INFO] Processing SRX5775980. (24/67)
2021-08-23 13:34:22 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-23 13:34:23 [INFO] Processing SRX5775968. (25/67)
2021-08-23 13:34:23 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-23 13:34:23 [INFO] Processing SRX5775966. (26/67)
2021-08-23 13:34:23 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-23 13:34:24 [INFO] Processing SRX5775985. (27/67)
2021-08-23 13:34:24 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-23 13:34:25 [INFO] Processing SRX5776012. (28/67)
2021-08-23 13:34:25 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-23 13:34:26 [INFO] Processing SRX5775993. (29/67)
2021-08-23 13:34:26 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-23 13:34:26 [INFO] Processing SRX5775979. (30/67)
2021-08-23 13:34:26 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-23 13:34:27 [INFO] Writing to disk...
2021-08-23 13:34:27 [INFO] Processing SRX5775951. (31/67)
2021-08-23 13:34:27 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-23 13:34:28 [INFO] Processing SRX5776011. (32/67)
2021-08-23 13:34:28 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-23 13:34:29 [INFO] Processing SRX5775954. (33/67)
2021-08-23 13:34:29 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-23 13:34:29 [INFO] Processing SRX5775950. (34/67)
2021-08-23 13:34:29 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-23 13:34:30 [INFO] Processing SRX5775949. (35/67)
2021-08-23 13:34:30 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-23 13:34:31 [INFO] Processing SRX5775982. (36/67)
2021-08-23 13:34:31 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-23 13:34:31 [INFO] Processing SRX5775953. (37/67)
2021-08-23 13:34:31 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-23 13:34:32 [INFO] Processing SRX5775975. (38/67)
2021-08-23 13:34:32 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-23 13:34:33 [INFO] Processing SRX5775992. (39/67)
2021-08-23 13:34:33 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-23 13:34:33 [INFO] Processing SRX5776015. (40/67)
2021-08-23 13:34:33 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-23 13:34:34 [INFO] Writing to disk...
2021-08-23 13:34:34 [INFO] Processing SRX5776013. (41/67)
2021-08-23 13:34:34 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-23 13:34:35 [INFO] Processing SRX5775984. (42/67)
2021-08-23 13:34:35 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-23 13:34:36 [INFO] Processing SRX5775996. (43/67)
2021-08-23 13:34:36 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-23 13:34:37 [INFO] Processing SRX5776007. (44/67)
2021-08-23 13:34:37 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-23 13:34:38 [INFO] Processing SRX5775989. (45/67)
2021-08-23 13:34:38 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-23 13:34:38 [INFO] Processing SRX5776000. (46/67)
2021-08-23 13:34:38 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-23 13:34:39 [INFO] Processing SRX5775967. (47/67)
2021-08-23 13:34:39 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-23 13:34:40 [INFO] Processing SRX5775974. (48/67)
2021-08-23 13:34:40 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-23 13:34:40 [INFO] Processing SRX5776004. (49/67)
2021-08-23 13:34:40 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-23 13:34:41 [INFO] Processing SRX5775961. (50/67)
2021-08-23 13:34:41 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-23 13:34:42 [INFO] Writing to disk...
2021-08-23 13:34:42 [INFO] Processing SRX5775952. (51/67)
2021-08-23 13:34:42 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-23 13:34:43 [INFO] Processing SRX5775998. (52/67)
2021-08-23 13:34:43 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-23 13:34:44 [INFO] Processing SRX5775960. (53/67)
2021-08-23 13:34:44 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-23 13:34:44 [INFO] Processing SRX5776005. (54/67)
2021-08-23 13:34:44 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-23 13:34:45 [INFO] Processing SRX5775986. (55/67)
2021-08-23 13:34:45 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-23 13:34:45 [INFO] Processing SRX5776009. (56/67)
2021-08-23 13:34:45 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-23 13:34:47 [INFO] Processing SRX5776006. (57/67)
2021-08-23 13:34:47 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-23 13:34:47 [INFO] Processing SRX5776002. (58/67)
2021-08-23 13:34:47 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-23 13:34:48 [INFO] Processing SRX5775956. (59/67)
2021-08-23 13:34:48 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-23 13:34:49 [INFO] Processing SRX5775997. (60/67)
2021-08-23 13:34:49 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-23 13:34:50 [INFO] Writing to disk...
2021-08-23 13:34:50 [INFO] Processing SRX5775971. (61/67)
2021-08-23 13:34:50 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-23 13:34:51 [INFO] Processing SRX5776001. (62/67)
2021-08-23 13:34:51 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-23 13:34:52 [INFO] Processing SRX5775999. (63/67)
2021-08-23 13:34:52 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-23 13:34:52 [INFO] Processing SRX5775963. (64/67)
2021-08-23 13:34:52 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-23 13:34:53 [INFO] Processing SRX5775970. (65/67)
2021-08-23 13:34:53 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-23 13:34:53 [INFO] Processing SRX5775973. (66/67)
2021-08-23 13:34:53 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-23 13:34:54 [INFO] Processing SRX5775958. (67/67)
2021-08-23 13:34:54 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-23 13:34:55 [INFO] Writing to disk...
2021-08-23 13:34:55 [INFO] Finished.
2021-08-30 12:45:57 [INFO] Starting.
2021-08-30 12:45:57 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-30 12:45:57 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-30 12:45:57 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:57 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:57 [INFO] Writing every 10 Runs.
2021-08-30 12:45:57 [INFO] Processing SRX5775995. (1/67)
2021-08-30 12:45:57 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-30 12:45:58 [INFO] Processing SRX5775965. (2/67)
2021-08-30 12:45:58 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-30 12:45:59 [INFO] Processing SRX5775976. (3/67)
2021-08-30 12:45:59 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-30 12:45:59 [INFO] Processing SRX5775969. (4/67)
2021-08-30 12:45:59 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-30 12:46:00 [INFO] Processing SRX5776003. (5/67)
2021-08-30 12:46:00 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-30 12:46:01 [INFO] Processing SRX5775959. (6/67)
2021-08-30 12:46:01 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-30 12:46:01 [INFO] Processing SRX5775994. (7/67)
2021-08-30 12:46:01 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-30 12:46:02 [INFO] Processing SRX5775988. (8/67)
2021-08-30 12:46:02 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-30 12:46:03 [INFO] Processing SRX5775987. (9/67)
2021-08-30 12:46:03 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-30 12:46:03 [INFO] Processing SRX5775962. (10/67)
2021-08-30 12:46:03 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-30 12:46:04 [INFO] Writing to disk...
2021-08-30 12:46:05 [INFO] Processing SRX5776008. (11/67)
2021-08-30 12:46:05 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-30 12:46:06 [INFO] Processing SRX5775964. (12/67)
2021-08-30 12:46:06 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-30 12:46:06 [INFO] Processing SRX5775957. (13/67)
2021-08-30 12:46:06 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-30 12:46:07 [INFO] Processing SRX5775978. (14/67)
2021-08-30 12:46:07 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-30 12:46:08 [INFO] Processing SRX5775972. (15/67)
2021-08-30 12:46:08 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-30 12:46:09 [INFO] Processing SRX5775977. (16/67)
2021-08-30 12:46:09 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-30 12:46:10 [INFO] Processing SRX5775991. (17/67)
2021-08-30 12:46:10 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-30 12:46:10 [INFO] Processing SRX5776010. (18/67)
2021-08-30 12:46:10 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-30 12:46:11 [INFO] Processing SRX5775990. (19/67)
2021-08-30 12:46:11 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-30 12:46:12 [INFO] Processing SRX5775981. (20/67)
2021-08-30 12:46:12 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-30 12:46:12 [INFO] Writing to disk...
2021-08-30 12:46:13 [INFO] Processing SRX5775983. (21/67)
2021-08-30 12:46:13 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-30 12:46:14 [INFO] Processing SRX5776014. (22/67)
2021-08-30 12:46:14 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-30 12:46:14 [INFO] Processing SRX5775955. (23/67)
2021-08-30 12:46:14 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-30 12:46:15 [INFO] Processing SRX5775980. (24/67)
2021-08-30 12:46:15 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-30 12:46:16 [INFO] Processing SRX5775968. (25/67)
2021-08-30 12:46:16 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-30 12:46:17 [INFO] Processing SRX5775966. (26/67)
2021-08-30 12:46:17 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-30 12:46:18 [INFO] Processing SRX5775985. (27/67)
2021-08-30 12:46:18 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-30 12:46:18 [INFO] Processing SRX5776012. (28/67)
2021-08-30 12:46:18 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-30 12:46:19 [INFO] Processing SRX5775993. (29/67)
2021-08-30 12:46:19 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-30 12:46:20 [INFO] Processing SRX5775979. (30/67)
2021-08-30 12:46:20 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-30 12:46:21 [INFO] Writing to disk...
2021-08-30 12:46:21 [INFO] Processing SRX5775951. (31/67)
2021-08-30 12:46:21 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-30 12:46:22 [INFO] Processing SRX5776011. (32/67)
2021-08-30 12:46:22 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-30 12:46:23 [INFO] Processing SRX5775954. (33/67)
2021-08-30 12:46:23 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-30 12:46:23 [INFO] Processing SRX5775950. (34/67)
2021-08-30 12:46:23 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-30 12:46:24 [INFO] Processing SRX5775949. (35/67)
2021-08-30 12:46:24 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-30 12:46:25 [INFO] Processing SRX5775982. (36/67)
2021-08-30 12:46:25 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-30 12:46:25 [INFO] Processing SRX5775953. (37/67)
2021-08-30 12:46:25 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-30 12:46:26 [INFO] Processing SRX5775975. (38/67)
2021-08-30 12:46:26 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-30 12:46:27 [INFO] Processing SRX5775992. (39/67)
2021-08-30 12:46:27 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-30 12:46:28 [INFO] Processing SRX5776015. (40/67)
2021-08-30 12:46:28 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-30 12:46:29 [INFO] Writing to disk...
2021-08-30 12:46:29 [INFO] Processing SRX5776013. (41/67)
2021-08-30 12:46:29 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-30 12:46:30 [INFO] Processing SRX5775984. (42/67)
2021-08-30 12:46:30 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-30 12:46:31 [INFO] Processing SRX5775996. (43/67)
2021-08-30 12:46:31 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-30 12:46:31 [INFO] Processing SRX5776007. (44/67)
2021-08-30 12:46:31 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-30 12:46:32 [INFO] Processing SRX5775989. (45/67)
2021-08-30 12:46:32 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-30 12:46:33 [INFO] Processing SRX5776000. (46/67)
2021-08-30 12:46:33 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-30 12:46:34 [INFO] Processing SRX5775967. (47/67)
2021-08-30 12:46:34 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-30 12:46:35 [INFO] Processing SRX5775974. (48/67)
2021-08-30 12:46:35 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-30 12:46:35 [INFO] Processing SRX5776004. (49/67)
2021-08-30 12:46:35 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-30 12:46:36 [INFO] Processing SRX5775961. (50/67)
2021-08-30 12:46:36 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-30 12:46:37 [INFO] Writing to disk...
2021-08-30 12:46:38 [INFO] Processing SRX5775952. (51/67)
2021-08-30 12:46:38 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-30 12:46:38 [INFO] Processing SRX5775998. (52/67)
2021-08-30 12:46:38 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-30 12:46:39 [INFO] Processing SRX5775960. (53/67)
2021-08-30 12:46:39 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-30 12:46:40 [INFO] Processing SRX5776005. (54/67)
2021-08-30 12:46:40 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-30 12:46:41 [INFO] Processing SRX5775986. (55/67)
2021-08-30 12:46:41 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-30 12:46:42 [INFO] Processing SRX5776009. (56/67)
2021-08-30 12:46:42 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-30 12:46:43 [INFO] Processing SRX5776006. (57/67)
2021-08-30 12:46:43 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-30 12:46:44 [INFO] Processing SRX5776002. (58/67)
2021-08-30 12:46:44 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-30 12:46:44 [INFO] Processing SRX5775956. (59/67)
2021-08-30 12:46:44 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-30 12:46:45 [INFO] Processing SRX5775997. (60/67)
2021-08-30 12:46:45 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-30 12:46:46 [INFO] Writing to disk...
2021-08-30 12:46:47 [INFO] Processing SRX5775971. (61/67)
2021-08-30 12:46:47 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-30 12:46:47 [INFO] Processing SRX5776001. (62/67)
2021-08-30 12:46:47 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-30 12:46:48 [INFO] Processing SRX5775999. (63/67)
2021-08-30 12:46:48 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-30 12:46:49 [INFO] Processing SRX5775963. (64/67)
2021-08-30 12:46:49 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-30 12:46:49 [INFO] Processing SRX5775970. (65/67)
2021-08-30 12:46:49 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-30 12:46:50 [INFO] Processing SRX5775973. (66/67)
2021-08-30 12:46:50 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-30 12:46:51 [INFO] Processing SRX5775958. (67/67)
2021-08-30 12:46:51 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-30 12:46:51 [INFO] Writing to disk...
2021-08-30 12:46:52 [INFO] Finished.
2021-08-30 21:24:09 [INFO] Starting.
2021-08-30 21:24:09 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/
2021-08-30 21:24:09 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP194410/aggregate.hdf5
2021-08-30 21:24:09 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:24:10 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:24:10 [INFO] Writing every 10 Runs.
2021-08-30 21:24:10 [INFO] Processing SRX5775995. (1/67)
2021-08-30 21:24:10 [INFO] Processing SRX5775995-SRR8997198. (1/67)
2021-08-30 21:24:11 [INFO] Processing SRX5775965. (2/67)
2021-08-30 21:24:11 [INFO] Processing SRX5775965-SRR8997168. (2/67)
2021-08-30 21:24:12 [INFO] Processing SRX5775976. (3/67)
2021-08-30 21:24:12 [INFO] Processing SRX5775976-SRR8997179. (3/67)
2021-08-30 21:24:13 [INFO] Processing SRX5775969. (4/67)
2021-08-30 21:24:13 [INFO] Processing SRX5775969-SRR8997172. (4/67)
2021-08-30 21:24:13 [INFO] Processing SRX5776003. (5/67)
2021-08-30 21:24:13 [INFO] Processing SRX5776003-SRR8997206. (5/67)
2021-08-30 21:24:14 [INFO] Processing SRX5775959. (6/67)
2021-08-30 21:24:14 [INFO] Processing SRX5775959-SRR8997162. (6/67)
2021-08-30 21:24:15 [INFO] Processing SRX5775994. (7/67)
2021-08-30 21:24:15 [INFO] Processing SRX5775994-SRR8997197. (7/67)
2021-08-30 21:24:16 [INFO] Processing SRX5775988. (8/67)
2021-08-30 21:24:16 [INFO] Processing SRX5775988-SRR8997191. (8/67)
2021-08-30 21:24:17 [INFO] Processing SRX5775987. (9/67)
2021-08-30 21:24:17 [INFO] Processing SRX5775987-SRR8997190. (9/67)
2021-08-30 21:24:18 [INFO] Processing SRX5775962. (10/67)
2021-08-30 21:24:18 [INFO] Processing SRX5775962-SRR8997165. (10/67)
2021-08-30 21:24:18 [INFO] Writing to disk...
2021-08-30 21:24:19 [INFO] Processing SRX5776008. (11/67)
2021-08-30 21:24:19 [INFO] Processing SRX5776008-SRR8997211. (11/67)
2021-08-30 21:24:20 [INFO] Processing SRX5775964. (12/67)
2021-08-30 21:24:20 [INFO] Processing SRX5775964-SRR8997167. (12/67)
2021-08-30 21:24:21 [INFO] Processing SRX5775957. (13/67)
2021-08-30 21:24:21 [INFO] Processing SRX5775957-SRR8997160. (13/67)
2021-08-30 21:24:22 [INFO] Processing SRX5775978. (14/67)
2021-08-30 21:24:22 [INFO] Processing SRX5775978-SRR8997181. (14/67)
2021-08-30 21:24:23 [INFO] Processing SRX5775972. (15/67)
2021-08-30 21:24:23 [INFO] Processing SRX5775972-SRR8997175. (15/67)
2021-08-30 21:24:24 [INFO] Processing SRX5775977. (16/67)
2021-08-30 21:24:24 [INFO] Processing SRX5775977-SRR8997180. (16/67)
2021-08-30 21:24:25 [INFO] Processing SRX5775991. (17/67)
2021-08-30 21:24:25 [INFO] Processing SRX5775991-SRR8997194. (17/67)
2021-08-30 21:24:25 [INFO] Processing SRX5776010. (18/67)
2021-08-30 21:24:25 [INFO] Processing SRX5776010-SRR8997213. (18/67)
2021-08-30 21:24:27 [INFO] Processing SRX5775990. (19/67)
2021-08-30 21:24:27 [INFO] Processing SRX5775990-SRR8997193. (19/67)
2021-08-30 21:24:28 [INFO] Processing SRX5775981. (20/67)
2021-08-30 21:24:28 [INFO] Processing SRX5775981-SRR8997184. (20/67)
2021-08-30 21:24:29 [INFO] Writing to disk...
2021-08-30 21:24:29 [INFO] Processing SRX5775983. (21/67)
2021-08-30 21:24:29 [INFO] Processing SRX5775983-SRR8997186. (21/67)
2021-08-30 21:24:30 [INFO] Processing SRX5776014. (22/67)
2021-08-30 21:24:30 [INFO] Processing SRX5776014-SRR8997217. (22/67)
2021-08-30 21:24:31 [INFO] Processing SRX5775955. (23/67)
2021-08-30 21:24:31 [INFO] Processing SRX5775955-SRR8997158. (23/67)
2021-08-30 21:24:32 [INFO] Processing SRX5775980. (24/67)
2021-08-30 21:24:32 [INFO] Processing SRX5775980-SRR8997183. (24/67)
2021-08-30 21:24:33 [INFO] Processing SRX5775968. (25/67)
2021-08-30 21:24:33 [INFO] Processing SRX5775968-SRR8997171. (25/67)
2021-08-30 21:24:33 [INFO] Processing SRX5775966. (26/67)
2021-08-30 21:24:33 [INFO] Processing SRX5775966-SRR8997169. (26/67)
2021-08-30 21:24:34 [INFO] Processing SRX5775985. (27/67)
2021-08-30 21:24:34 [INFO] Processing SRX5775985-SRR8997188. (27/67)
2021-08-30 21:24:35 [INFO] Processing SRX5776012. (28/67)
2021-08-30 21:24:35 [INFO] Processing SRX5776012-SRR8997215. (28/67)
2021-08-30 21:24:36 [INFO] Processing SRX5775993. (29/67)
2021-08-30 21:24:36 [INFO] Processing SRX5775993-SRR8997196. (29/67)
2021-08-30 21:24:37 [INFO] Processing SRX5775979. (30/67)
2021-08-30 21:24:37 [INFO] Processing SRX5775979-SRR8997182. (30/67)
2021-08-30 21:24:38 [INFO] Writing to disk...
2021-08-30 21:24:39 [INFO] Processing SRX5775951. (31/67)
2021-08-30 21:24:39 [INFO] Processing SRX5775951-SRR8997154. (31/67)
2021-08-30 21:24:40 [INFO] Processing SRX5776011. (32/67)
2021-08-30 21:24:40 [INFO] Processing SRX5776011-SRR8997214. (32/67)
2021-08-30 21:24:41 [INFO] Processing SRX5775954. (33/67)
2021-08-30 21:24:41 [INFO] Processing SRX5775954-SRR8997157. (33/67)
2021-08-30 21:24:42 [INFO] Processing SRX5775950. (34/67)
2021-08-30 21:24:42 [INFO] Processing SRX5775950-SRR8997153. (34/67)
2021-08-30 21:24:42 [INFO] Processing SRX5775949. (35/67)
2021-08-30 21:24:42 [INFO] Processing SRX5775949-SRR8997152. (35/67)
2021-08-30 21:24:44 [INFO] Processing SRX5775982. (36/67)
2021-08-30 21:24:44 [INFO] Processing SRX5775982-SRR8997185. (36/67)
2021-08-30 21:24:44 [INFO] Processing SRX5775953. (37/67)
2021-08-30 21:24:44 [INFO] Processing SRX5775953-SRR8997156. (37/67)
2021-08-30 21:24:45 [INFO] Processing SRX5775975. (38/67)
2021-08-30 21:24:45 [INFO] Processing SRX5775975-SRR8997178. (38/67)
2021-08-30 21:24:46 [INFO] Processing SRX5775992. (39/67)
2021-08-30 21:24:46 [INFO] Processing SRX5775992-SRR8997195. (39/67)
2021-08-30 21:24:47 [INFO] Processing SRX5776015. (40/67)
2021-08-30 21:24:47 [INFO] Processing SRX5776015-SRR8997218. (40/67)
2021-08-30 21:24:48 [INFO] Writing to disk...
2021-08-30 21:24:49 [INFO] Processing SRX5776013. (41/67)
2021-08-30 21:24:49 [INFO] Processing SRX5776013-SRR8997216. (41/67)
2021-08-30 21:24:50 [INFO] Processing SRX5775984. (42/67)
2021-08-30 21:24:50 [INFO] Processing SRX5775984-SRR8997187. (42/67)
2021-08-30 21:24:51 [INFO] Processing SRX5775996. (43/67)
2021-08-30 21:24:51 [INFO] Processing SRX5775996-SRR8997199. (43/67)
2021-08-30 21:24:52 [INFO] Processing SRX5776007. (44/67)
2021-08-30 21:24:52 [INFO] Processing SRX5776007-SRR8997210. (44/67)
2021-08-30 21:24:53 [INFO] Processing SRX5775989. (45/67)
2021-08-30 21:24:53 [INFO] Processing SRX5775989-SRR8997192. (45/67)
2021-08-30 21:24:54 [INFO] Processing SRX5776000. (46/67)
2021-08-30 21:24:54 [INFO] Processing SRX5776000-SRR8997203. (46/67)
2021-08-30 21:24:55 [INFO] Processing SRX5775967. (47/67)
2021-08-30 21:24:55 [INFO] Processing SRX5775967-SRR8997170. (47/67)
2021-08-30 21:24:56 [INFO] Processing SRX5775974. (48/67)
2021-08-30 21:24:56 [INFO] Processing SRX5775974-SRR8997177. (48/67)
2021-08-30 21:24:57 [INFO] Processing SRX5776004. (49/67)
2021-08-30 21:24:57 [INFO] Processing SRX5776004-SRR8997207. (49/67)
2021-08-30 21:24:57 [INFO] Processing SRX5775961. (50/67)
2021-08-30 21:24:57 [INFO] Processing SRX5775961-SRR8997164. (50/67)
2021-08-30 21:24:58 [INFO] Writing to disk...
2021-08-30 21:24:59 [INFO] Processing SRX5775952. (51/67)
2021-08-30 21:24:59 [INFO] Processing SRX5775952-SRR8997155. (51/67)
2021-08-30 21:25:00 [INFO] Processing SRX5775998. (52/67)
2021-08-30 21:25:00 [INFO] Processing SRX5775998-SRR8997201. (52/67)
2021-08-30 21:25:01 [INFO] Processing SRX5775960. (53/67)
2021-08-30 21:25:01 [INFO] Processing SRX5775960-SRR8997163. (53/67)
2021-08-30 21:25:02 [INFO] Processing SRX5776005. (54/67)
2021-08-30 21:25:02 [INFO] Processing SRX5776005-SRR8997208. (54/67)
2021-08-30 21:25:03 [INFO] Processing SRX5775986. (55/67)
2021-08-30 21:25:03 [INFO] Processing SRX5775986-SRR8997189. (55/67)
2021-08-30 21:25:04 [INFO] Processing SRX5776009. (56/67)
2021-08-30 21:25:04 [INFO] Processing SRX5776009-SRR8997212. (56/67)
2021-08-30 21:25:05 [INFO] Processing SRX5776006. (57/67)
2021-08-30 21:25:05 [INFO] Processing SRX5776006-SRR8997209. (57/67)
2021-08-30 21:25:06 [INFO] Processing SRX5776002. (58/67)
2021-08-30 21:25:06 [INFO] Processing SRX5776002-SRR8997205. (58/67)
2021-08-30 21:25:07 [INFO] Processing SRX5775956. (59/67)
2021-08-30 21:25:07 [INFO] Processing SRX5775956-SRR8997159. (59/67)
2021-08-30 21:25:08 [INFO] Processing SRX5775997. (60/67)
2021-08-30 21:25:08 [INFO] Processing SRX5775997-SRR8997200. (60/67)
2021-08-30 21:25:09 [INFO] Writing to disk...
2021-08-30 21:25:10 [INFO] Processing SRX5775971. (61/67)
2021-08-30 21:25:10 [INFO] Processing SRX5775971-SRR8997174. (61/67)
2021-08-30 21:25:11 [INFO] Processing SRX5776001. (62/67)
2021-08-30 21:25:11 [INFO] Processing SRX5776001-SRR8997204. (62/67)
2021-08-30 21:25:12 [INFO] Processing SRX5775999. (63/67)
2021-08-30 21:25:12 [INFO] Processing SRX5775999-SRR8997202. (63/67)
2021-08-30 21:25:13 [INFO] Processing SRX5775963. (64/67)
2021-08-30 21:25:13 [INFO] Processing SRX5775963-SRR8997166. (64/67)
2021-08-30 21:25:13 [INFO] Processing SRX5775970. (65/67)
2021-08-30 21:25:13 [INFO] Processing SRX5775970-SRR8997173. (65/67)
2021-08-30 21:25:14 [INFO] Processing SRX5775973. (66/67)
2021-08-30 21:25:14 [INFO] Processing SRX5775973-SRR8997176. (66/67)
2021-08-30 21:25:15 [INFO] Processing SRX5775958. (67/67)
2021-08-30 21:25:15 [INFO] Processing SRX5775958-SRR8997161. (67/67)
2021-08-30 21:25:16 [INFO] Writing to disk...
2021-08-30 21:25:17 [INFO] Finished.