2021-08-02 14:43:29 [INFO] Starting.
2021-08-02 14:43:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-02 14:43:29 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-02 14:43:29 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:29 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX6991934. (1/14)
2021-08-02 14:43:30 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-02 14:43:39 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-02 14:43:50 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-02 14:44:00 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-02 14:44:06 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-02 14:44:15 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-02 14:44:25 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-02 14:44:36 [INFO] Processing SRX6991924. (2/14)
2021-08-02 14:44:36 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-02 14:44:42 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-02 14:44:54 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-02 14:45:01 [INFO] Writing to disk...
2021-08-02 14:45:04 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-02 14:45:10 [INFO] Processing SRX6991921. (3/14)
2021-08-02 14:45:10 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-02 14:45:14 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-02 14:45:21 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-02 14:45:31 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-02 14:45:39 [INFO] Processing SRX6991927. (4/14)
2021-08-02 14:45:39 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-02 14:45:47 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-02 14:45:52 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-02 14:46:01 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-02 14:46:11 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-02 14:46:20 [INFO] Writing to disk...
2021-08-02 14:46:24 [INFO] Processing SRX6991932. (5/14)
2021-08-02 14:46:24 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-02 14:46:36 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-02 14:46:47 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-02 14:46:59 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-02 14:47:11 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-02 14:47:24 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-02 14:47:33 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-02 14:47:40 [INFO] Processing SRX6991926. (6/14)
2021-08-02 14:47:40 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-02 14:47:47 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-02 14:47:56 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-02 14:48:08 [INFO] Writing to disk...
2021-08-02 14:48:23 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-02 14:48:35 [INFO] Processing SRX6991933. (7/14)
2021-08-02 14:48:35 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-02 14:48:48 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-02 14:48:55 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-02 14:49:07 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-02 14:49:20 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-02 14:49:34 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-02 14:49:48 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-02 14:50:00 [INFO] Processing SRX6991923. (8/14)
2021-08-02 14:50:00 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-02 14:50:14 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-02 14:50:20 [INFO] Writing to disk...
2021-08-02 14:50:37 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-02 14:50:46 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-02 14:50:54 [INFO] Processing SRX6991931. (9/14)
2021-08-02 14:50:54 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-02 14:51:06 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-02 14:51:18 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-02 14:51:30 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-02 14:51:43 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-02 14:51:53 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-02 14:52:02 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-02 14:52:13 [INFO] Processing SRX6991930. (10/14)
2021-08-02 14:52:13 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-02 14:52:26 [INFO] Writing to disk...
2021-08-02 14:52:44 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-02 14:52:57 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-02 14:53:09 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-02 14:53:21 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-02 14:53:28 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-02 14:53:40 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-02 14:53:52 [INFO] Processing SRX6991929. (11/14)
2021-08-02 14:53:52 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-02 14:54:02 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-02 14:54:13 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-02 14:54:26 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-02 14:54:39 [INFO] Writing to disk...
2021-08-02 14:55:00 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-02 14:55:15 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-02 14:55:23 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-02 14:55:37 [INFO] Processing SRX6991925. (12/14)
2021-08-02 14:55:37 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-02 14:55:50 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-02 14:56:00 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-02 14:56:11 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-02 14:56:20 [INFO] Processing SRX6991928. (13/14)
2021-08-02 14:56:20 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-02 14:56:33 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-02 14:56:45 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-02 14:56:54 [INFO] Writing to disk...
2021-08-02 14:57:17 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-02 14:57:27 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-02 14:57:38 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-02 14:57:49 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-02 14:57:59 [INFO] Processing SRX6991922. (14/14)
2021-08-02 14:57:59 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-02 14:58:10 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-02 14:58:19 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-02 14:58:28 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-02 14:58:41 [INFO] Writing to disk...
2021-08-02 14:59:04 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX6991934. (1/14)
2021-08-12 14:31:21 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-12 14:31:33 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-12 14:31:41 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-12 14:31:53 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-12 14:32:00 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-12 14:32:10 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-12 14:32:22 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-12 14:32:33 [INFO] Processing SRX6991924. (2/14)
2021-08-12 14:32:33 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-12 14:32:38 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-12 14:32:49 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-12 14:32:56 [INFO] Writing to disk...
2021-08-12 14:33:00 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-12 14:33:06 [INFO] Processing SRX6991921. (3/14)
2021-08-12 14:33:06 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-12 14:33:10 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-12 14:33:17 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-12 14:33:25 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-12 14:33:32 [INFO] Processing SRX6991927. (4/14)
2021-08-12 14:33:32 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-12 14:33:41 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-12 14:33:47 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-12 14:33:58 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-12 14:34:09 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-12 14:34:18 [INFO] Writing to disk...
2021-08-12 14:34:28 [INFO] Processing SRX6991932. (5/14)
2021-08-12 14:34:28 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-12 14:34:40 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-12 14:34:52 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-12 14:35:04 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-12 14:35:17 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-12 14:35:29 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-12 14:35:41 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-12 14:35:48 [INFO] Processing SRX6991926. (6/14)
2021-08-12 14:35:48 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-12 14:35:57 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-12 14:36:06 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-12 14:36:16 [INFO] Writing to disk...
2021-08-12 14:36:30 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-12 14:36:43 [INFO] Processing SRX6991933. (7/14)
2021-08-12 14:36:43 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-12 14:36:57 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-12 14:37:03 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-12 14:37:14 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-12 14:37:25 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-12 14:37:37 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-12 14:37:51 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-12 14:38:03 [INFO] Processing SRX6991923. (8/14)
2021-08-12 14:38:03 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-12 14:38:15 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-12 14:38:21 [INFO] Writing to disk...
2021-08-12 14:38:36 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-12 14:38:44 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-12 14:38:51 [INFO] Processing SRX6991931. (9/14)
2021-08-12 14:38:51 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-12 14:39:03 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-12 14:39:14 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-12 14:39:24 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-12 14:39:35 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-12 14:39:47 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-12 14:39:55 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-12 14:40:09 [INFO] Processing SRX6991930. (10/14)
2021-08-12 14:40:09 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-12 14:40:22 [INFO] Writing to disk...
2021-08-12 14:40:38 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-12 14:40:51 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-12 14:41:02 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-12 14:41:13 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-12 14:41:19 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-12 14:41:30 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-12 14:41:41 [INFO] Processing SRX6991929. (11/14)
2021-08-12 14:41:41 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-12 14:41:51 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-12 14:42:01 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-12 14:42:19 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-12 14:42:26 [INFO] Writing to disk...
2021-08-12 14:42:41 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-12 14:42:51 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-12 14:42:57 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-12 14:43:08 [INFO] Processing SRX6991925. (12/14)
2021-08-12 14:43:08 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-12 14:43:22 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-12 14:43:31 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-12 14:43:39 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-12 14:43:45 [INFO] Processing SRX6991928. (13/14)
2021-08-12 14:43:45 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-12 14:43:57 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-12 14:44:05 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-12 14:44:11 [INFO] Writing to disk...
2021-08-12 14:44:24 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-12 14:44:32 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-12 14:44:40 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-12 14:44:49 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-12 14:44:56 [INFO] Processing SRX6991922. (14/14)
2021-08-12 14:44:56 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-12 14:45:03 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-12 14:45:10 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-12 14:45:17 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-12 14:45:28 [INFO] Writing to disk...
2021-08-12 14:45:42 [INFO] Finished.
2021-08-12 16:34:16 [INFO] Starting.
2021-08-12 16:34:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-12 16:34:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-12 16:34:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:17 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:17 [INFO] Writing every 10 Runs.
2021-08-12 16:34:17 [INFO] Processing SRX6991934. (1/14)
2021-08-12 16:34:17 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-12 16:34:31 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-12 16:34:41 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-12 16:34:53 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-12 16:34:59 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-12 16:35:09 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-12 16:35:23 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-12 16:35:35 [INFO] Processing SRX6991924. (2/14)
2021-08-12 16:35:35 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-12 16:35:42 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-12 16:35:54 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-12 16:36:03 [INFO] Writing to disk...
2021-08-12 16:36:08 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-12 16:36:16 [INFO] Processing SRX6991921. (3/14)
2021-08-12 16:36:16 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-12 16:36:20 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-12 16:36:28 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-12 16:36:38 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-12 16:36:49 [INFO] Processing SRX6991927. (4/14)
2021-08-12 16:36:49 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-12 16:36:58 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-12 16:37:04 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-12 16:37:17 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-12 16:37:31 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-12 16:37:41 [INFO] Writing to disk...
2021-08-12 16:37:59 [INFO] Processing SRX6991932. (5/14)
2021-08-12 16:37:59 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-12 16:38:11 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-12 16:38:24 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-12 16:38:38 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-12 16:38:54 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-12 16:39:06 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-12 16:39:20 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-12 16:39:26 [INFO] Processing SRX6991926. (6/14)
2021-08-12 16:39:26 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-12 16:39:35 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-12 16:39:44 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-12 16:39:55 [INFO] Writing to disk...
2021-08-12 16:40:13 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-12 16:40:30 [INFO] Processing SRX6991933. (7/14)
2021-08-12 16:40:30 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-12 16:40:46 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-12 16:40:56 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-12 16:41:12 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-12 16:41:27 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-12 16:41:42 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-12 16:41:57 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-12 16:42:11 [INFO] Processing SRX6991923. (8/14)
2021-08-12 16:42:11 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-12 16:42:23 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-12 16:42:31 [INFO] Writing to disk...
2021-08-12 16:42:48 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-12 16:42:57 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-12 16:43:06 [INFO] Processing SRX6991931. (9/14)
2021-08-12 16:43:06 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-12 16:43:19 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-12 16:43:32 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-12 16:43:43 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-12 16:43:56 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-12 16:44:09 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-12 16:44:17 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-12 16:44:29 [INFO] Processing SRX6991930. (10/14)
2021-08-12 16:44:29 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-12 16:44:42 [INFO] Writing to disk...
2021-08-12 16:44:59 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-12 16:45:15 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-12 16:45:29 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-12 16:45:43 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-12 16:45:52 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-12 16:46:03 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-12 16:46:15 [INFO] Processing SRX6991929. (11/14)
2021-08-12 16:46:15 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-12 16:46:28 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-12 16:46:39 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-12 16:46:51 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-12 16:47:03 [INFO] Writing to disk...
2021-08-12 16:47:23 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-12 16:47:35 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-12 16:47:42 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-12 16:47:54 [INFO] Processing SRX6991925. (12/14)
2021-08-12 16:47:54 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-12 16:48:10 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-12 16:48:19 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-12 16:48:30 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-12 16:48:38 [INFO] Processing SRX6991928. (13/14)
2021-08-12 16:48:38 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-12 16:48:51 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-12 16:49:01 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-12 16:49:09 [INFO] Writing to disk...
2021-08-12 16:49:27 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-12 16:49:39 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-12 16:49:51 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-12 16:50:04 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-12 16:50:16 [INFO] Processing SRX6991922. (14/14)
2021-08-12 16:50:16 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-12 16:50:28 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-12 16:50:39 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-12 16:50:50 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-12 16:51:07 [INFO] Writing to disk...
2021-08-12 16:51:26 [INFO] Finished.
2021-08-13 09:44:55 [INFO] Starting.
2021-08-13 09:44:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-13 09:44:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-13 09:44:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:56 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:56 [INFO] Writing every 10 Runs.
2021-08-13 09:44:56 [INFO] Processing SRX6991934. (1/14)
2021-08-13 09:44:56 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-13 09:45:07 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-13 09:45:16 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-13 09:45:27 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-13 09:45:33 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-13 09:45:42 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-13 09:45:52 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-13 09:46:01 [INFO] Processing SRX6991924. (2/14)
2021-08-13 09:46:01 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-13 09:46:07 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-13 09:46:16 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-13 09:46:24 [INFO] Writing to disk...
2021-08-13 09:46:28 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-13 09:46:35 [INFO] Processing SRX6991921. (3/14)
2021-08-13 09:46:35 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-13 09:46:40 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-13 09:46:48 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-13 09:46:58 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-13 09:47:06 [INFO] Processing SRX6991927. (4/14)
2021-08-13 09:47:06 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-13 09:47:14 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-13 09:47:20 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-13 09:47:29 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-13 09:47:39 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-13 09:47:46 [INFO] Writing to disk...
2021-08-13 09:47:56 [INFO] Processing SRX6991932. (5/14)
2021-08-13 09:47:56 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-13 09:48:06 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-13 09:48:16 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-13 09:48:27 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-13 09:48:40 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-13 09:48:51 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-13 09:49:03 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-13 09:49:12 [INFO] Processing SRX6991926. (6/14)
2021-08-13 09:49:12 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-13 09:49:21 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-13 09:49:29 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-13 09:49:40 [INFO] Writing to disk...
2021-08-13 09:49:58 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-13 09:50:11 [INFO] Processing SRX6991933. (7/14)
2021-08-13 09:50:11 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-13 09:50:24 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-13 09:50:31 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-13 09:50:44 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-13 09:50:58 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-13 09:51:15 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-13 09:51:30 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-13 09:51:44 [INFO] Processing SRX6991923. (8/14)
2021-08-13 09:51:44 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-13 09:51:58 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-13 09:52:05 [INFO] Writing to disk...
2021-08-13 09:52:27 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-13 09:52:35 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-13 09:52:44 [INFO] Processing SRX6991931. (9/14)
2021-08-13 09:52:44 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-13 09:52:57 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-13 09:53:09 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-13 09:53:21 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-13 09:53:36 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-13 09:53:47 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-13 09:53:56 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-13 09:54:09 [INFO] Processing SRX6991930. (10/14)
2021-08-13 09:54:09 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-13 09:54:22 [INFO] Writing to disk...
2021-08-13 09:54:46 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-13 09:54:58 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-13 09:55:09 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-13 09:55:22 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-13 09:55:31 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-13 09:55:43 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-13 09:55:55 [INFO] Processing SRX6991929. (11/14)
2021-08-13 09:55:55 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-13 09:56:09 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-13 09:56:21 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-13 09:56:37 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-13 09:56:53 [INFO] Writing to disk...
2021-08-13 09:57:21 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-13 09:57:33 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-13 09:57:42 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-13 09:57:54 [INFO] Processing SRX6991925. (12/14)
2021-08-13 09:57:54 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-13 09:58:07 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-13 09:58:17 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-13 09:58:27 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-13 09:58:37 [INFO] Processing SRX6991928. (13/14)
2021-08-13 09:58:37 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-13 09:58:48 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-13 09:58:59 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-13 09:59:07 [INFO] Writing to disk...
2021-08-13 09:59:36 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-13 09:59:47 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-13 09:59:58 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-13 10:00:08 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-13 10:00:18 [INFO] Processing SRX6991922. (14/14)
2021-08-13 10:00:18 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-13 10:00:27 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-13 10:00:36 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-13 10:00:46 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-13 10:01:00 [INFO] Writing to disk...
2021-08-13 10:01:27 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX6991934. (1/14)
2021-08-13 17:23:02 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-13 17:23:19 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-13 17:23:32 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-13 17:23:45 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-13 17:23:54 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-13 17:24:07 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-13 17:24:25 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-13 17:24:40 [INFO] Processing SRX6991924. (2/14)
2021-08-13 17:24:40 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-13 17:24:50 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-13 17:25:03 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-13 17:25:15 [INFO] Writing to disk...
2021-08-13 17:25:20 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-13 17:25:30 [INFO] Processing SRX6991921. (3/14)
2021-08-13 17:25:30 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-13 17:25:36 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-13 17:25:47 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-13 17:26:00 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-13 17:26:13 [INFO] Processing SRX6991927. (4/14)
2021-08-13 17:26:13 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-13 17:26:25 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-13 17:26:35 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-13 17:26:49 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-13 17:27:04 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-13 17:27:17 [INFO] Writing to disk...
2021-08-13 17:27:26 [INFO] Processing SRX6991932. (5/14)
2021-08-13 17:27:26 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-13 17:27:42 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-13 17:28:00 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-13 17:28:19 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-13 17:28:39 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-13 17:28:59 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-13 17:29:20 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-13 17:29:30 [INFO] Processing SRX6991926. (6/14)
2021-08-13 17:29:30 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-13 17:29:43 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-13 17:29:57 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-13 17:30:15 [INFO] Writing to disk...
2021-08-13 17:30:41 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-13 17:31:01 [INFO] Processing SRX6991933. (7/14)
2021-08-13 17:31:01 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-13 17:31:21 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-13 17:31:34 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-13 17:31:55 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-13 17:32:18 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-13 17:32:37 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-13 17:32:58 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-13 17:33:20 [INFO] Processing SRX6991923. (8/14)
2021-08-13 17:33:20 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-13 17:33:39 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-13 17:33:53 [INFO] Writing to disk...
2021-08-13 17:34:22 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-13 17:34:36 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-13 17:34:52 [INFO] Processing SRX6991931. (9/14)
2021-08-13 17:34:52 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-13 17:35:15 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-13 17:35:37 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-13 17:35:56 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-13 17:36:16 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-13 17:36:37 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-13 17:36:52 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-13 17:37:14 [INFO] Processing SRX6991930. (10/14)
2021-08-13 17:37:14 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-13 17:37:36 [INFO] Writing to disk...
2021-08-13 17:38:11 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-13 17:38:33 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-13 17:38:53 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-13 17:39:15 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-13 17:39:29 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-13 17:39:50 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-13 17:40:12 [INFO] Processing SRX6991929. (11/14)
2021-08-13 17:40:12 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-13 17:40:32 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-13 17:40:51 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-13 17:41:12 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-13 17:41:31 [INFO] Writing to disk...
2021-08-13 17:42:08 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-13 17:42:27 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-13 17:42:41 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-13 17:43:00 [INFO] Processing SRX6991925. (12/14)
2021-08-13 17:43:00 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-13 17:43:22 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-13 17:43:36 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-13 17:43:51 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-13 17:44:04 [INFO] Processing SRX6991928. (13/14)
2021-08-13 17:44:04 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-13 17:44:26 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-13 17:44:51 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-13 17:45:09 [INFO] Writing to disk...
2021-08-13 17:45:56 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-13 17:46:21 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-13 17:46:46 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-13 17:47:10 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-13 17:47:35 [INFO] Processing SRX6991922. (14/14)
2021-08-13 17:47:35 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-13 17:48:02 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-13 17:48:25 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-13 17:48:48 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-13 17:49:14 [INFO] Writing to disk...
2021-08-13 17:50:03 [INFO] Finished.
2021-08-16 11:36:51 [INFO] Starting.
2021-08-16 11:36:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-16 11:36:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-16 11:36:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:52 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:52 [INFO] Writing every 10 Runs.
2021-08-16 11:36:52 [INFO] Processing SRX6991934. (1/14)
2021-08-16 11:36:52 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-16 16:36:44 [INFO] Starting.
2021-08-16 16:36:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-16 16:36:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-16 16:36:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 16:36:45 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 16:36:45 [INFO] Writing every 10 Runs.
2021-08-16 16:36:45 [INFO] Processing SRX6991934. (1/14)
2021-08-16 16:36:45 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-16 16:40:24 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-16 16:47:13 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-16 16:54:20 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-16 17:01:13 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-16 17:08:06 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-16 17:15:13 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-16 17:22:22 [INFO] Processing SRX6991924. (2/14)
2021-08-16 17:22:22 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-16 17:29:16 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-16 17:36:18 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-16 17:43:12 [INFO] Writing to disk...
2021-08-16 17:44:04 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-16 17:50:59 [INFO] Processing SRX6991921. (3/14)
2021-08-16 17:50:59 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-16 17:58:00 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-16 18:07:36 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-16 18:18:17 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-16 18:27:38 [INFO] Processing SRX6991927. (4/14)
2021-08-16 18:27:38 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-16 18:38:15 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-16 18:48:49 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-16 18:57:08 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-16 19:04:38 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-16 19:13:01 [INFO] Writing to disk...
2021-08-16 19:15:48 [INFO] Processing SRX6991932. (5/14)
2021-08-16 19:15:48 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-16 19:25:36 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-16 19:33:55 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-16 19:42:55 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-16 19:51:30 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-16 19:59:45 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-16 20:08:27 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-16 20:16:37 [INFO] Processing SRX6991926. (6/14)
2021-08-16 20:16:37 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-16 20:25:00 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-16 20:33:46 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-16 20:43:37 [INFO] Writing to disk...
2021-08-16 20:45:07 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-16 20:53:55 [INFO] Processing SRX6991933. (7/14)
2021-08-16 20:53:55 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-16 21:02:32 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-16 21:12:19 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-16 21:23:00 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-16 21:30:20 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-16 21:37:38 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-16 21:45:12 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-16 21:52:39 [INFO] Processing SRX6991923. (8/14)
2021-08-16 21:52:39 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-16 21:59:56 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-16 22:07:22 [INFO] Writing to disk...
2021-08-16 22:08:57 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-16 22:16:10 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-16 22:23:21 [INFO] Processing SRX6991931. (9/14)
2021-08-16 22:23:21 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-16 22:30:51 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-16 22:38:11 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-16 22:45:34 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-16 22:53:07 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-16 23:00:26 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-16 23:07:43 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-16 23:15:18 [INFO] Processing SRX6991930. (10/14)
2021-08-16 23:15:19 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-16 23:22:45 [INFO] Writing to disk...
2021-08-16 23:24:21 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-16 23:31:50 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-16 23:39:27 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-16 23:46:53 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-16 23:54:22 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-17 00:01:54 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-17 00:09:17 [INFO] Processing SRX6991929. (11/14)
2021-08-17 00:09:17 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-17 00:16:51 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-17 00:24:39 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-17 00:32:11 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-17 00:39:48 [INFO] Writing to disk...
2021-08-17 00:41:45 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-17 00:49:35 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-17 00:57:14 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-17 01:04:44 [INFO] Processing SRX6991925. (12/14)
2021-08-17 01:04:44 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-17 01:12:23 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-17 01:19:54 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-17 01:27:34 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-17 01:35:19 [INFO] Processing SRX6991928. (13/14)
2021-08-17 01:35:19 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-17 01:42:54 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-17 01:50:26 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-17 01:58:25 [INFO] Writing to disk...
2021-08-17 02:00:30 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-17 02:08:07 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-17 02:15:41 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-17 02:23:32 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-17 02:31:03 [INFO] Processing SRX6991922. (14/14)
2021-08-17 02:31:03 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-17 02:38:41 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-17 02:46:28 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-17 02:54:03 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-17 03:01:51 [INFO] Writing to disk...
2021-08-17 03:03:58 [INFO] Finished.
2021-08-23 13:34:05 [INFO] Starting.
2021-08-23 13:34:05 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-23 13:34:05 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-23 13:34:05 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:05 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:05 [INFO] Writing every 10 Runs.
2021-08-23 13:34:05 [INFO] Processing SRX6991934. (1/14)
2021-08-23 13:34:05 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-23 13:34:12 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-23 13:34:18 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-23 13:34:24 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-23 13:34:28 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-23 13:34:34 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-23 13:34:41 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-23 13:34:49 [INFO] Processing SRX6991924. (2/14)
2021-08-23 13:34:49 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-23 13:34:52 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-23 13:34:58 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-23 13:35:03 [INFO] Writing to disk...
2021-08-23 13:35:05 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-23 13:35:10 [INFO] Processing SRX6991921. (3/14)
2021-08-23 13:35:10 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-23 13:35:12 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-23 13:35:17 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-23 13:35:22 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-23 13:35:28 [INFO] Processing SRX6991927. (4/14)
2021-08-23 13:35:28 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-23 13:35:34 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-23 13:35:37 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-23 13:35:45 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-23 13:35:51 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-23 13:35:58 [INFO] Writing to disk...
2021-08-23 13:36:02 [INFO] Processing SRX6991932. (5/14)
2021-08-23 13:36:02 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-23 13:36:09 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-23 13:36:16 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-23 13:36:23 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-23 13:36:31 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-23 13:36:39 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-23 13:36:46 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-23 13:36:50 [INFO] Processing SRX6991926. (6/14)
2021-08-23 13:36:50 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-23 13:36:56 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-23 13:37:01 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-23 13:37:08 [INFO] Writing to disk...
2021-08-23 13:37:13 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-23 13:37:22 [INFO] Processing SRX6991933. (7/14)
2021-08-23 13:37:22 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-23 13:37:30 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-23 13:37:34 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-23 13:37:43 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-23 13:37:51 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-23 13:38:00 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-23 13:38:07 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-23 13:38:14 [INFO] Processing SRX6991923. (8/14)
2021-08-23 13:38:14 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-23 13:38:22 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-23 13:38:26 [INFO] Writing to disk...
2021-08-23 13:38:36 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-23 13:38:43 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-23 13:38:47 [INFO] Processing SRX6991931. (9/14)
2021-08-23 13:38:47 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-23 13:38:55 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-23 13:39:02 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-23 13:39:09 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-23 13:39:17 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-23 13:39:24 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-23 13:39:28 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-23 13:39:36 [INFO] Processing SRX6991930. (10/14)
2021-08-23 13:39:36 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-23 13:39:44 [INFO] Writing to disk...
2021-08-23 13:39:53 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-23 13:40:01 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-23 13:40:10 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-23 13:40:18 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-23 13:40:22 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-23 13:40:30 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-23 13:40:37 [INFO] Processing SRX6991929. (11/14)
2021-08-23 13:40:37 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-23 13:40:44 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-23 13:40:51 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-23 13:40:57 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-23 13:41:05 [INFO] Writing to disk...
2021-08-23 13:41:16 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-23 13:41:24 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-23 13:41:28 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-23 13:41:35 [INFO] Processing SRX6991925. (12/14)
2021-08-23 13:41:35 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-23 13:41:45 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-23 13:41:50 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-23 13:41:56 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-23 13:42:02 [INFO] Processing SRX6991928. (13/14)
2021-08-23 13:42:02 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-23 13:42:09 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-23 13:42:15 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-23 13:42:19 [INFO] Writing to disk...
2021-08-23 13:42:27 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-23 13:42:33 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-23 13:42:38 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-23 13:42:44 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-23 13:42:49 [INFO] Processing SRX6991922. (14/14)
2021-08-23 13:42:49 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-23 13:42:55 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-23 13:42:58 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-23 13:43:03 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-23 13:43:11 [INFO] Writing to disk...
2021-08-23 13:43:19 [INFO] Finished.
2021-08-30 12:45:57 [INFO] Starting.
2021-08-30 12:45:57 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-30 12:45:57 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-30 12:45:57 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:57 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:57 [INFO] Writing every 10 Runs.
2021-08-30 12:45:57 [INFO] Processing SRX6991934. (1/14)
2021-08-30 12:45:57 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-30 12:46:03 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-30 12:46:08 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-30 12:46:14 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-30 12:46:17 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-30 12:46:23 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-30 12:46:29 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-30 12:46:34 [INFO] Processing SRX6991924. (2/14)
2021-08-30 12:46:34 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-30 12:46:38 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-30 12:46:43 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-30 12:46:47 [INFO] Writing to disk...
2021-08-30 12:46:49 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-30 12:46:53 [INFO] Processing SRX6991921. (3/14)
2021-08-30 12:46:53 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-30 12:46:55 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-30 12:46:58 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-30 12:47:02 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-30 12:47:07 [INFO] Processing SRX6991927. (4/14)
2021-08-30 12:47:07 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-30 12:47:11 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-30 12:47:14 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-30 12:47:21 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-30 12:47:26 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-30 12:47:31 [INFO] Writing to disk...
2021-08-30 12:47:37 [INFO] Processing SRX6991932. (5/14)
2021-08-30 12:47:37 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-30 12:47:42 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-30 12:47:48 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-30 12:47:54 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-30 12:48:00 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-30 12:48:05 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-30 12:48:11 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-30 12:48:14 [INFO] Processing SRX6991926. (6/14)
2021-08-30 12:48:14 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-30 12:48:19 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-30 12:48:23 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-30 12:48:28 [INFO] Writing to disk...
2021-08-30 12:48:34 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-30 12:48:41 [INFO] Processing SRX6991933. (7/14)
2021-08-30 12:48:41 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-30 12:48:48 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-30 12:48:52 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-30 12:48:58 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-30 12:49:03 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-30 12:49:09 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-30 12:49:16 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-30 12:49:22 [INFO] Processing SRX6991923. (8/14)
2021-08-30 12:49:22 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-30 12:49:28 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-30 12:49:31 [INFO] Writing to disk...
2021-08-30 12:49:41 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-30 12:49:45 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-30 12:49:50 [INFO] Processing SRX6991931. (9/14)
2021-08-30 12:49:50 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-30 12:49:55 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-30 12:50:02 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-30 12:50:06 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-30 12:50:12 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-30 12:50:18 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-30 12:50:21 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-30 12:50:27 [INFO] Processing SRX6991930. (10/14)
2021-08-30 12:50:27 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-30 12:50:33 [INFO] Writing to disk...
2021-08-30 12:50:41 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-30 12:50:48 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-30 12:50:53 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-30 12:50:59 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-30 12:51:02 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-30 12:51:07 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-30 12:51:12 [INFO] Processing SRX6991929. (11/14)
2021-08-30 12:51:12 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-30 12:51:17 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-30 12:51:23 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-30 12:51:28 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-30 12:51:33 [INFO] Writing to disk...
2021-08-30 12:51:36 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-30 12:51:42 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-30 12:51:45 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-30 12:51:50 [INFO] Processing SRX6991925. (12/14)
2021-08-30 12:51:50 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-30 12:51:57 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-30 12:52:01 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-30 12:52:06 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-30 12:52:10 [INFO] Processing SRX6991928. (13/14)
2021-08-30 12:52:10 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-30 12:52:15 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-30 12:52:19 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-30 12:52:23 [INFO] Writing to disk...
2021-08-30 12:52:24 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-30 12:52:29 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-30 12:52:33 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-30 12:52:38 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-30 12:52:42 [INFO] Processing SRX6991922. (14/14)
2021-08-30 12:52:42 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-30 12:52:47 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-30 12:52:51 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-30 12:52:55 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-30 12:53:01 [INFO] Writing to disk...
2021-08-30 12:53:03 [INFO] Finished.
2021-08-30 21:22:54 [INFO] Starting.
2021-08-30 21:22:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/
2021-08-30 21:22:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP223513/aggregate.hdf5
2021-08-30 21:22:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:22:55 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:22:55 [INFO] Writing every 10 Runs.
2021-08-30 21:22:55 [INFO] Processing SRX6991934. (1/14)
2021-08-30 21:22:55 [INFO] Processing SRX6991934-SRR10278789. (1/78)
2021-08-30 21:23:00 [INFO] Processing SRX6991934-SRR10278784. (2/78)
2021-08-30 21:23:04 [INFO] Processing SRX6991934-SRR10278787. (3/78)
2021-08-30 21:23:09 [INFO] Processing SRX6991934-SRR10278783. (4/78)
2021-08-30 21:23:12 [INFO] Processing SRX6991934-SRR10278785. (5/78)
2021-08-30 21:23:16 [INFO] Processing SRX6991934-SRR10278788. (6/78)
2021-08-30 21:23:21 [INFO] Processing SRX6991934-SRR10278786. (7/78)
2021-08-30 21:23:25 [INFO] Processing SRX6991924. (2/14)
2021-08-30 21:23:25 [INFO] Processing SRX6991924-SRR10278717. (8/78)
2021-08-30 21:23:28 [INFO] Processing SRX6991924-SRR10278718. (9/78)
2021-08-30 21:23:32 [INFO] Processing SRX6991924-SRR10278720. (10/78)
2021-08-30 21:23:35 [INFO] Writing to disk...
2021-08-30 21:23:36 [INFO] Processing SRX6991924-SRR10278719. (11/78)
2021-08-30 21:23:40 [INFO] Processing SRX6991921. (3/14)
2021-08-30 21:23:40 [INFO] Processing SRX6991921-SRR10278768. (12/78)
2021-08-30 21:23:42 [INFO] Processing SRX6991921-SRR10278769. (13/78)
2021-08-30 21:23:45 [INFO] Processing SRX6991921-SRR10278770. (14/78)
2021-08-30 21:23:49 [INFO] Processing SRX6991921-SRR10278771. (15/78)
2021-08-30 21:23:53 [INFO] Processing SRX6991927. (4/14)
2021-08-30 21:23:53 [INFO] Processing SRX6991927-SRR10278731. (16/78)
2021-08-30 21:23:57 [INFO] Processing SRX6991927-SRR10278729. (17/78)
2021-08-30 21:23:59 [INFO] Processing SRX6991927-SRR10278732. (18/78)
2021-08-30 21:24:03 [INFO] Processing SRX6991927-SRR10278733. (19/78)
2021-08-30 21:24:07 [INFO] Processing SRX6991927-SRR10278730. (20/78)
2021-08-30 21:24:11 [INFO] Writing to disk...
2021-08-30 21:24:12 [INFO] Processing SRX6991932. (5/14)
2021-08-30 21:24:12 [INFO] Processing SRX6991932-SRR10278765. (21/78)
2021-08-30 21:24:17 [INFO] Processing SRX6991932-SRR10278767. (22/78)
2021-08-30 21:24:21 [INFO] Processing SRX6991932-SRR10278766. (23/78)
2021-08-30 21:24:26 [INFO] Processing SRX6991932-SRR10278775. (24/78)
2021-08-30 21:24:31 [INFO] Processing SRX6991932-SRR10278764. (25/78)
2021-08-30 21:24:36 [INFO] Processing SRX6991932-SRR10278763. (26/78)
2021-08-30 21:24:40 [INFO] Processing SRX6991932-SRR10278762. (27/78)
2021-08-30 21:24:44 [INFO] Processing SRX6991926. (6/14)
2021-08-30 21:24:44 [INFO] Processing SRX6991926-SRR10278727. (28/78)
2021-08-30 21:24:48 [INFO] Processing SRX6991926-SRR10278725. (29/78)
2021-08-30 21:24:51 [INFO] Processing SRX6991926-SRR10278728. (30/78)
2021-08-30 21:24:55 [INFO] Writing to disk...
2021-08-30 21:24:56 [INFO] Processing SRX6991926-SRR10278726. (31/78)
2021-08-30 21:25:02 [INFO] Processing SRX6991933. (7/14)
2021-08-30 21:25:02 [INFO] Processing SRX6991933-SRR10278782. (32/78)
2021-08-30 21:25:07 [INFO] Processing SRX6991933-SRR10278776. (33/78)
2021-08-30 21:25:10 [INFO] Processing SRX6991933-SRR10278780. (34/78)
2021-08-30 21:25:15 [INFO] Processing SRX6991933-SRR10278777. (35/78)
2021-08-30 21:25:20 [INFO] Processing SRX6991933-SRR10278778. (36/78)
2021-08-30 21:25:24 [INFO] Processing SRX6991933-SRR10278781. (37/78)
2021-08-30 21:25:29 [INFO] Processing SRX6991933-SRR10278779. (38/78)
2021-08-30 21:25:33 [INFO] Processing SRX6991923. (8/14)
2021-08-30 21:25:33 [INFO] Processing SRX6991923-SRR10278714. (39/78)
2021-08-30 21:25:37 [INFO] Processing SRX6991923-SRR10278713. (40/78)
2021-08-30 21:25:40 [INFO] Writing to disk...
2021-08-30 21:25:48 [INFO] Processing SRX6991923-SRR10278716. (41/78)
2021-08-30 21:25:52 [INFO] Processing SRX6991923-SRR10278715. (42/78)
2021-08-30 21:25:55 [INFO] Processing SRX6991931. (9/14)
2021-08-30 21:25:55 [INFO] Processing SRX6991931-SRR10278760. (43/78)
2021-08-30 21:25:59 [INFO] Processing SRX6991931-SRR10278757. (44/78)
2021-08-30 21:26:03 [INFO] Processing SRX6991931-SRR10278758. (45/78)
2021-08-30 21:26:07 [INFO] Processing SRX6991931-SRR10278761. (46/78)
2021-08-30 21:26:12 [INFO] Processing SRX6991931-SRR10278759. (47/78)
2021-08-30 21:26:16 [INFO] Processing SRX6991931-SRR10278755. (48/78)
2021-08-30 21:26:19 [INFO] Processing SRX6991931-SRR10278756. (49/78)
2021-08-30 21:26:23 [INFO] Processing SRX6991930. (10/14)
2021-08-30 21:26:23 [INFO] Processing SRX6991930-SRR10278752. (50/78)
2021-08-30 21:26:27 [INFO] Writing to disk...
2021-08-30 21:26:28 [INFO] Processing SRX6991930-SRR10278754. (51/78)
2021-08-30 21:26:33 [INFO] Processing SRX6991930-SRR10278750. (52/78)
2021-08-30 21:26:38 [INFO] Processing SRX6991930-SRR10278753. (53/78)
2021-08-30 21:26:42 [INFO] Processing SRX6991930-SRR10278748. (54/78)
2021-08-30 21:26:45 [INFO] Processing SRX6991930-SRR10278751. (55/78)
2021-08-30 21:26:50 [INFO] Processing SRX6991930-SRR10278749. (56/78)
2021-08-30 21:26:54 [INFO] Processing SRX6991929. (11/14)
2021-08-30 21:26:54 [INFO] Processing SRX6991929-SRR10278745. (57/78)
2021-08-30 21:26:58 [INFO] Processing SRX6991929-SRR10278742. (58/78)
2021-08-30 21:27:03 [INFO] Processing SRX6991929-SRR10278744. (59/78)
2021-08-30 21:27:06 [INFO] Processing SRX6991929-SRR10278743. (60/78)
2021-08-30 21:27:10 [INFO] Writing to disk...
2021-08-30 21:27:12 [INFO] Processing SRX6991929-SRR10278746. (61/78)
2021-08-30 21:27:16 [INFO] Processing SRX6991929-SRR10278741. (62/78)
2021-08-30 21:27:19 [INFO] Processing SRX6991929-SRR10278747. (63/78)
2021-08-30 21:27:23 [INFO] Processing SRX6991925. (12/14)
2021-08-30 21:27:23 [INFO] Processing SRX6991925-SRR10278722. (64/78)
2021-08-30 21:27:28 [INFO] Processing SRX6991925-SRR10278723. (65/78)
2021-08-30 21:27:32 [INFO] Processing SRX6991925-SRR10278724. (66/78)
2021-08-30 21:27:36 [INFO] Processing SRX6991925-SRR10278721. (67/78)
2021-08-30 21:27:39 [INFO] Processing SRX6991928. (13/14)
2021-08-30 21:27:39 [INFO] Processing SRX6991928-SRR10278735. (68/78)
2021-08-30 21:27:44 [INFO] Processing SRX6991928-SRR10278740. (69/78)
2021-08-30 21:27:48 [INFO] Processing SRX6991928-SRR10278734. (70/78)
2021-08-30 21:27:51 [INFO] Writing to disk...
2021-08-30 21:27:52 [INFO] Processing SRX6991928-SRR10278736. (71/78)
2021-08-30 21:27:55 [INFO] Processing SRX6991928-SRR10278738. (72/78)
2021-08-30 21:27:59 [INFO] Processing SRX6991928-SRR10278739. (73/78)
2021-08-30 21:28:03 [INFO] Processing SRX6991928-SRR10278737. (74/78)
2021-08-30 21:28:07 [INFO] Processing SRX6991922. (14/14)
2021-08-30 21:28:07 [INFO] Processing SRX6991922-SRR10278712. (75/78)
2021-08-30 21:28:11 [INFO] Processing SRX6991922-SRR10278772. (76/78)
2021-08-30 21:28:14 [INFO] Processing SRX6991922-SRR10278774. (77/78)
2021-08-30 21:28:18 [INFO] Processing SRX6991922-SRR10278773. (78/78)
2021-08-30 21:28:23 [INFO] Writing to disk...
2021-08-30 21:28:24 [INFO] Finished.