2021-08-02 14:43:29 [INFO] Starting.
2021-08-02 14:43:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-02 14:43:29 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-02 14:43:29 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:29 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX7810991. (1/40)
2021-08-02 14:43:30 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-02 14:43:38 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-02 14:43:48 [INFO] Processing SRX7811000. (2/40)
2021-08-02 14:43:48 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-02 14:43:58 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-02 14:44:08 [INFO] Processing SRX7810989. (3/40)
2021-08-02 14:44:08 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-02 14:44:24 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-02 14:44:31 [INFO] Processing SRX7811014. (4/40)
2021-08-02 14:44:31 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-02 14:44:36 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-02 14:44:43 [INFO] Processing SRX7810997. (5/40)
2021-08-02 14:44:43 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-02 14:44:46 [INFO] Processing SRX7810987. (6/40)
2021-08-02 14:44:46 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-02 14:44:57 [INFO] Writing to disk...
2021-08-02 14:44:59 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-02 14:45:14 [INFO] Processing SRX7811015. (7/40)
2021-08-02 14:45:14 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-02 14:45:18 [INFO] Processing SRX7811016. (8/40)
2021-08-02 14:45:18 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-02 14:45:35 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-02 14:45:49 [INFO] Processing SRX7810998. (9/40)
2021-08-02 14:45:49 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-02 14:45:53 [INFO] Processing SRX7810988. (10/40)
2021-08-02 14:45:53 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-02 14:46:01 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-02 14:46:23 [INFO] Processing SRX7810995. (11/40)
2021-08-02 14:46:23 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-02 14:46:29 [INFO] Processing SRX7811005. (12/40)
2021-08-02 14:46:29 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-02 14:46:46 [INFO] Processing SRX7811006. (13/40)
2021-08-02 14:46:46 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-02 14:47:01 [INFO] Writing to disk...
2021-08-02 14:47:09 [INFO] Processing SRX7811013. (14/40)
2021-08-02 14:47:09 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-02 14:47:18 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-02 14:47:25 [INFO] Processing SRX7811022. (15/40)
2021-08-02 14:47:25 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-02 14:47:41 [INFO] Processing SRX7811024. (16/40)
2021-08-02 14:47:41 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-02 14:47:58 [INFO] Processing SRX7811021. (17/40)
2021-08-02 14:47:58 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-02 14:48:15 [INFO] Processing SRX7811002. (18/40)
2021-08-02 14:48:15 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-02 14:48:28 [INFO] Processing SRX7810996. (19/40)
2021-08-02 14:48:28 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-02 14:48:34 [INFO] Processing SRX7810986. (20/40)
2021-08-02 14:48:34 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-02 14:48:40 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-02 14:48:53 [INFO] Processing SRX7811010. (21/40)
2021-08-02 14:48:53 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-02 14:49:11 [INFO] Writing to disk...
2021-08-02 14:49:24 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-02 14:49:41 [INFO] Processing SRX7811001. (22/40)
2021-08-02 14:49:41 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-02 14:49:52 [INFO] Processing SRX7811007. (23/40)
2021-08-02 14:49:52 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-02 14:49:59 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-02 14:50:08 [INFO] Processing SRX7811017. (24/40)
2021-08-02 14:50:08 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-02 14:50:22 [INFO] Processing SRX7810992. (25/40)
2021-08-02 14:50:22 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-02 14:50:37 [INFO] Processing SRX7811023. (26/40)
2021-08-02 14:50:37 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-02 14:51:00 [INFO] Processing SRX7810990. (27/40)
2021-08-02 14:51:00 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-02 14:51:11 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-02 14:51:23 [INFO] Processing SRX7810994. (28/40)
2021-08-02 14:51:23 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-02 14:51:30 [INFO] Writing to disk...
2021-08-02 14:51:44 [INFO] Processing SRX7811025. (29/40)
2021-08-02 14:51:44 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-02 14:52:01 [INFO] Processing SRX7811019. (30/40)
2021-08-02 14:52:01 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-02 14:52:15 [INFO] Processing SRX7810993. (31/40)
2021-08-02 14:52:15 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-02 14:52:29 [INFO] Processing SRX7810999. (32/40)
2021-08-02 14:52:29 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-02 14:52:34 [INFO] Processing SRX7811003. (33/40)
2021-08-02 14:52:34 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-02 14:52:47 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-02 14:52:57 [INFO] Processing SRX7811008. (34/40)
2021-08-02 14:52:57 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-02 14:53:13 [INFO] Processing SRX7811012. (35/40)
2021-08-02 14:53:13 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-02 14:53:23 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-02 14:53:31 [INFO] Processing SRX7811018. (36/40)
2021-08-02 14:53:31 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-02 14:53:48 [INFO] Writing to disk...
2021-08-02 14:54:05 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-02 14:54:19 [INFO] Processing SRX7811009. (37/40)
2021-08-02 14:54:19 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-02 14:54:26 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-02 14:54:34 [INFO] Processing SRX7811011. (38/40)
2021-08-02 14:54:34 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-02 14:54:42 [INFO] Processing SRX7811004. (39/40)
2021-08-02 14:54:42 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-02 14:54:54 [INFO] Processing SRX7811020. (40/40)
2021-08-02 14:54:54 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-02 14:55:07 [INFO] Writing to disk...
2021-08-02 14:55:22 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX7810991. (1/40)
2021-08-12 14:31:21 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-12 14:31:32 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-12 14:31:42 [INFO] Processing SRX7811000. (2/40)
2021-08-12 14:31:42 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-12 14:31:53 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-12 14:32:04 [INFO] Processing SRX7810989. (3/40)
2021-08-12 14:32:04 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-12 14:32:22 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-12 14:32:30 [INFO] Processing SRX7811014. (4/40)
2021-08-12 14:32:30 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-12 14:32:37 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-12 14:32:45 [INFO] Processing SRX7810997. (5/40)
2021-08-12 14:32:45 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-12 14:32:48 [INFO] Processing SRX7810987. (6/40)
2021-08-12 14:32:48 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-12 14:32:55 [INFO] Writing to disk...
2021-08-12 14:32:58 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-12 14:33:17 [INFO] Processing SRX7811015. (7/40)
2021-08-12 14:33:17 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-12 14:33:22 [INFO] Processing SRX7811016. (8/40)
2021-08-12 14:33:22 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-12 14:33:37 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-12 14:33:53 [INFO] Processing SRX7810998. (9/40)
2021-08-12 14:33:53 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-12 14:33:57 [INFO] Processing SRX7810988. (10/40)
2021-08-12 14:33:57 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-12 14:34:04 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-12 14:34:27 [INFO] Processing SRX7810995. (11/40)
2021-08-12 14:34:27 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-12 14:34:32 [INFO] Processing SRX7811005. (12/40)
2021-08-12 14:34:32 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-12 14:34:51 [INFO] Processing SRX7811006. (13/40)
2021-08-12 14:34:51 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-12 14:35:09 [INFO] Writing to disk...
2021-08-12 14:35:23 [INFO] Processing SRX7811013. (14/40)
2021-08-12 14:35:23 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-12 14:35:32 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-12 14:35:38 [INFO] Processing SRX7811022. (15/40)
2021-08-12 14:35:38 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-12 14:35:58 [INFO] Processing SRX7811024. (16/40)
2021-08-12 14:35:58 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-12 14:36:17 [INFO] Processing SRX7811021. (17/40)
2021-08-12 14:36:17 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-12 14:36:33 [INFO] Processing SRX7811002. (18/40)
2021-08-12 14:36:33 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-12 14:36:46 [INFO] Processing SRX7810996. (19/40)
2021-08-12 14:36:46 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-12 14:36:51 [INFO] Processing SRX7810986. (20/40)
2021-08-12 14:36:51 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-12 14:36:57 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-12 14:37:06 [INFO] Processing SRX7811010. (21/40)
2021-08-12 14:37:06 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-12 14:37:27 [INFO] Writing to disk...
2021-08-12 14:37:44 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-12 14:38:01 [INFO] Processing SRX7811001. (22/40)
2021-08-12 14:38:01 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-12 14:38:10 [INFO] Processing SRX7811007. (23/40)
2021-08-12 14:38:10 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-12 14:38:16 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-12 14:38:22 [INFO] Processing SRX7811017. (24/40)
2021-08-12 14:38:22 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-12 14:38:33 [INFO] Processing SRX7810992. (25/40)
2021-08-12 14:38:33 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-12 14:38:51 [INFO] Processing SRX7811023. (26/40)
2021-08-12 14:38:51 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-12 14:39:12 [INFO] Processing SRX7810990. (27/40)
2021-08-12 14:39:12 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-12 14:39:20 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-12 14:39:30 [INFO] Processing SRX7810994. (28/40)
2021-08-12 14:39:30 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-12 14:39:35 [INFO] Writing to disk...
2021-08-12 14:39:53 [INFO] Processing SRX7811025. (29/40)
2021-08-12 14:39:53 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-12 14:40:14 [INFO] Processing SRX7811019. (30/40)
2021-08-12 14:40:14 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-12 14:40:29 [INFO] Processing SRX7810993. (31/40)
2021-08-12 14:40:29 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-12 14:40:44 [INFO] Processing SRX7810999. (32/40)
2021-08-12 14:40:44 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-12 14:40:48 [INFO] Processing SRX7811003. (33/40)
2021-08-12 14:40:48 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-12 14:41:00 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-12 14:41:08 [INFO] Processing SRX7811008. (34/40)
2021-08-12 14:41:08 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-12 14:41:23 [INFO] Processing SRX7811012. (35/40)
2021-08-12 14:41:23 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-12 14:41:32 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-12 14:41:38 [INFO] Processing SRX7811018. (36/40)
2021-08-12 14:41:38 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-12 14:41:52 [INFO] Writing to disk...
2021-08-12 14:42:09 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-12 14:42:23 [INFO] Processing SRX7811009. (37/40)
2021-08-12 14:42:23 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-12 14:42:28 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-12 14:42:35 [INFO] Processing SRX7811011. (38/40)
2021-08-12 14:42:35 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-12 14:42:41 [INFO] Processing SRX7811004. (39/40)
2021-08-12 14:42:41 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-12 14:42:51 [INFO] Processing SRX7811020. (40/40)
2021-08-12 14:42:51 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-12 14:43:01 [INFO] Writing to disk...
2021-08-12 14:43:18 [INFO] Finished.
2021-08-12 16:34:16 [INFO] Starting.
2021-08-12 16:34:16 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-12 16:34:16 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-12 16:34:16 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:34:16 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:34:16 [INFO] Writing every 10 Runs.
2021-08-12 16:34:16 [INFO] Processing SRX7810991. (1/40)
2021-08-12 16:34:16 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-12 16:34:26 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-12 16:34:36 [INFO] Processing SRX7811000. (2/40)
2021-08-12 16:34:36 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-12 16:34:48 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-12 16:35:00 [INFO] Processing SRX7810989. (3/40)
2021-08-12 16:35:00 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-12 16:35:20 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-12 16:35:28 [INFO] Processing SRX7811014. (4/40)
2021-08-12 16:35:28 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-12 16:35:33 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-12 16:35:42 [INFO] Processing SRX7810997. (5/40)
2021-08-12 16:35:42 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-12 16:35:45 [INFO] Processing SRX7810987. (6/40)
2021-08-12 16:35:45 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-12 16:35:54 [INFO] Writing to disk...
2021-08-12 16:35:57 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-12 16:36:18 [INFO] Processing SRX7811015. (7/40)
2021-08-12 16:36:18 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-12 16:36:23 [INFO] Processing SRX7811016. (8/40)
2021-08-12 16:36:23 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-12 16:36:43 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-12 16:36:58 [INFO] Processing SRX7810998. (9/40)
2021-08-12 16:36:58 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-12 16:37:01 [INFO] Processing SRX7810988. (10/40)
2021-08-12 16:37:01 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-12 16:37:10 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-12 16:37:39 [INFO] Processing SRX7810995. (11/40)
2021-08-12 16:37:39 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-12 16:37:45 [INFO] Processing SRX7811005. (12/40)
2021-08-12 16:37:45 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-12 16:38:09 [INFO] Processing SRX7811006. (13/40)
2021-08-12 16:38:09 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-12 16:38:27 [INFO] Writing to disk...
2021-08-12 16:38:43 [INFO] Processing SRX7811013. (14/40)
2021-08-12 16:38:43 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-12 16:38:53 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-12 16:39:00 [INFO] Processing SRX7811022. (15/40)
2021-08-12 16:39:00 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-12 16:39:19 [INFO] Processing SRX7811024. (16/40)
2021-08-12 16:39:19 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-12 16:39:34 [INFO] Processing SRX7811021. (17/40)
2021-08-12 16:39:34 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-12 16:39:54 [INFO] Processing SRX7811002. (18/40)
2021-08-12 16:39:54 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-12 16:40:10 [INFO] Processing SRX7810996. (19/40)
2021-08-12 16:40:10 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-12 16:40:17 [INFO] Processing SRX7810986. (20/40)
2021-08-12 16:40:17 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-12 16:40:25 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-12 16:40:41 [INFO] Processing SRX7811010. (21/40)
2021-08-12 16:40:41 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-12 16:41:07 [INFO] Writing to disk...
2021-08-12 16:41:26 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-12 16:41:48 [INFO] Processing SRX7811001. (22/40)
2021-08-12 16:41:48 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-12 16:41:59 [INFO] Processing SRX7811007. (23/40)
2021-08-12 16:41:59 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-12 16:42:07 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-12 16:42:14 [INFO] Processing SRX7811017. (24/40)
2021-08-12 16:42:14 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-12 16:42:27 [INFO] Processing SRX7810992. (25/40)
2021-08-12 16:42:27 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-12 16:42:44 [INFO] Processing SRX7811023. (26/40)
2021-08-12 16:42:44 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-12 16:43:10 [INFO] Processing SRX7810990. (27/40)
2021-08-12 16:43:10 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-12 16:43:22 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-12 16:43:32 [INFO] Processing SRX7810994. (28/40)
2021-08-12 16:43:32 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-12 16:43:38 [INFO] Writing to disk...
2021-08-12 16:43:56 [INFO] Processing SRX7811025. (29/40)
2021-08-12 16:43:56 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-12 16:44:10 [INFO] Processing SRX7811019. (30/40)
2021-08-12 16:44:10 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-12 16:44:29 [INFO] Processing SRX7810993. (31/40)
2021-08-12 16:44:29 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-12 16:44:48 [INFO] Processing SRX7810999. (32/40)
2021-08-12 16:44:48 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-12 16:44:54 [INFO] Processing SRX7811003. (33/40)
2021-08-12 16:44:54 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-12 16:45:10 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-12 16:45:22 [INFO] Processing SRX7811008. (34/40)
2021-08-12 16:45:22 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-12 16:45:39 [INFO] Processing SRX7811012. (35/40)
2021-08-12 16:45:39 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-12 16:45:49 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-12 16:45:56 [INFO] Processing SRX7811018. (36/40)
2021-08-12 16:45:56 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-12 16:46:12 [INFO] Writing to disk...
2021-08-12 16:46:33 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-12 16:46:51 [INFO] Processing SRX7811009. (37/40)
2021-08-12 16:46:51 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-12 16:46:56 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-12 16:47:04 [INFO] Processing SRX7811011. (38/40)
2021-08-12 16:47:04 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-12 16:47:09 [INFO] Processing SRX7811004. (39/40)
2021-08-12 16:47:09 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-12 16:47:24 [INFO] Processing SRX7811020. (40/40)
2021-08-12 16:47:24 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-12 16:47:36 [INFO] Writing to disk...
2021-08-12 16:47:56 [INFO] Finished.
2021-08-13 09:44:55 [INFO] Starting.
2021-08-13 09:44:55 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-13 09:44:55 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-13 09:44:55 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:56 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:56 [INFO] Writing every 10 Runs.
2021-08-13 09:44:56 [INFO] Processing SRX7810991. (1/40)
2021-08-13 09:44:56 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-13 09:45:05 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-13 09:45:14 [INFO] Processing SRX7811000. (2/40)
2021-08-13 09:45:14 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-13 09:45:24 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-13 09:45:33 [INFO] Processing SRX7810989. (3/40)
2021-08-13 09:45:33 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-13 09:45:47 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-13 09:45:55 [INFO] Processing SRX7811014. (4/40)
2021-08-13 09:45:55 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-13 09:46:01 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-13 09:46:09 [INFO] Processing SRX7810997. (5/40)
2021-08-13 09:46:09 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-13 09:46:12 [INFO] Processing SRX7810987. (6/40)
2021-08-13 09:46:12 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-13 09:46:19 [INFO] Writing to disk...
2021-08-13 09:46:23 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-13 09:46:38 [INFO] Processing SRX7811015. (7/40)
2021-08-13 09:46:38 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-13 09:46:42 [INFO] Processing SRX7811016. (8/40)
2021-08-13 09:46:42 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-13 09:47:00 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-13 09:47:13 [INFO] Processing SRX7810998. (9/40)
2021-08-13 09:47:13 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-13 09:47:17 [INFO] Processing SRX7810988. (10/40)
2021-08-13 09:47:17 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-13 09:47:25 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-13 09:47:46 [INFO] Processing SRX7810995. (11/40)
2021-08-13 09:47:46 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-13 09:47:51 [INFO] Processing SRX7811005. (12/40)
2021-08-13 09:47:51 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-13 09:48:04 [INFO] Processing SRX7811006. (13/40)
2021-08-13 09:48:04 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-13 09:48:22 [INFO] Writing to disk...
2021-08-13 09:48:38 [INFO] Processing SRX7811013. (14/40)
2021-08-13 09:48:38 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-13 09:48:49 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-13 09:48:57 [INFO] Processing SRX7811022. (15/40)
2021-08-13 09:48:57 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-13 09:49:16 [INFO] Processing SRX7811024. (16/40)
2021-08-13 09:49:16 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-13 09:49:31 [INFO] Processing SRX7811021. (17/40)
2021-08-13 09:49:31 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-13 09:49:50 [INFO] Processing SRX7811002. (18/40)
2021-08-13 09:49:50 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-13 09:50:03 [INFO] Processing SRX7810996. (19/40)
2021-08-13 09:50:03 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-13 09:50:09 [INFO] Processing SRX7810986. (20/40)
2021-08-13 09:50:09 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-13 09:50:17 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-13 09:50:29 [INFO] Processing SRX7811010. (21/40)
2021-08-13 09:50:29 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-13 09:50:49 [INFO] Writing to disk...
2021-08-13 09:51:13 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-13 09:51:31 [INFO] Processing SRX7811001. (22/40)
2021-08-13 09:51:31 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-13 09:51:43 [INFO] Processing SRX7811007. (23/40)
2021-08-13 09:51:43 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-13 09:51:51 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-13 09:51:59 [INFO] Processing SRX7811017. (24/40)
2021-08-13 09:51:59 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-13 09:52:14 [INFO] Processing SRX7810992. (25/40)
2021-08-13 09:52:15 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-13 09:52:30 [INFO] Processing SRX7811023. (26/40)
2021-08-13 09:52:31 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-13 09:52:54 [INFO] Processing SRX7810990. (27/40)
2021-08-13 09:52:54 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-13 09:53:06 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-13 09:53:18 [INFO] Processing SRX7810994. (28/40)
2021-08-13 09:53:18 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-13 09:53:25 [INFO] Writing to disk...
2021-08-13 09:53:49 [INFO] Processing SRX7811025. (29/40)
2021-08-13 09:53:49 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-13 09:54:06 [INFO] Processing SRX7811019. (30/40)
2021-08-13 09:54:06 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-13 09:54:23 [INFO] Processing SRX7810993. (31/40)
2021-08-13 09:54:23 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-13 09:54:38 [INFO] Processing SRX7810999. (32/40)
2021-08-13 09:54:39 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-13 09:54:44 [INFO] Processing SRX7811003. (33/40)
2021-08-13 09:54:44 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-13 09:54:57 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-13 09:55:07 [INFO] Processing SRX7811008. (34/40)
2021-08-13 09:55:07 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-13 09:55:21 [INFO] Processing SRX7811012. (35/40)
2021-08-13 09:55:21 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-13 09:55:31 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-13 09:55:39 [INFO] Processing SRX7811018. (36/40)
2021-08-13 09:55:39 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-13 09:55:54 [INFO] Writing to disk...
2021-08-13 09:56:20 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-13 09:56:37 [INFO] Processing SRX7811009. (37/40)
2021-08-13 09:56:37 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-13 09:56:45 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-13 09:56:56 [INFO] Processing SRX7811011. (38/40)
2021-08-13 09:56:56 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-13 09:57:06 [INFO] Processing SRX7811004. (39/40)
2021-08-13 09:57:06 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-13 09:57:20 [INFO] Processing SRX7811020. (40/40)
2021-08-13 09:57:20 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-13 09:57:34 [INFO] Writing to disk...
2021-08-13 09:58:02 [INFO] Finished.
2021-08-13 17:23:01 [INFO] Starting.
2021-08-13 17:23:01 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-13 17:23:01 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-13 17:23:01 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:23:02 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:23:02 [INFO] Writing every 10 Runs.
2021-08-13 17:23:02 [INFO] Processing SRX7810991. (1/40)
2021-08-13 17:23:02 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-13 17:23:16 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-13 17:23:30 [INFO] Processing SRX7811000. (2/40)
2021-08-13 17:23:30 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-13 17:23:48 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-13 17:24:04 [INFO] Processing SRX7810989. (3/40)
2021-08-13 17:24:04 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-13 17:24:35 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-13 17:24:47 [INFO] Processing SRX7811014. (4/40)
2021-08-13 17:24:47 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-13 17:24:55 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-13 17:25:08 [INFO] Processing SRX7810997. (5/40)
2021-08-13 17:25:08 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-13 17:25:13 [INFO] Processing SRX7810987. (6/40)
2021-08-13 17:25:13 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-13 17:25:24 [INFO] Writing to disk...
2021-08-13 17:25:33 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-13 17:26:03 [INFO] Processing SRX7811015. (7/40)
2021-08-13 17:26:03 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-13 17:26:11 [INFO] Processing SRX7811016. (8/40)
2021-08-13 17:26:11 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-13 17:26:37 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-13 17:26:59 [INFO] Processing SRX7810998. (9/40)
2021-08-13 17:26:59 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-13 17:27:05 [INFO] Processing SRX7810988. (10/40)
2021-08-13 17:27:05 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-13 17:27:18 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-13 17:28:07 [INFO] Processing SRX7810995. (11/40)
2021-08-13 17:28:07 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-13 17:28:15 [INFO] Processing SRX7811005. (12/40)
2021-08-13 17:28:15 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-13 17:28:49 [INFO] Processing SRX7811006. (13/40)
2021-08-13 17:28:49 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-13 17:29:21 [INFO] Writing to disk...
2021-08-13 17:29:56 [INFO] Processing SRX7811013. (14/40)
2021-08-13 17:29:56 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-13 17:30:12 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-13 17:30:23 [INFO] Processing SRX7811022. (15/40)
2021-08-13 17:30:23 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-13 17:30:58 [INFO] Processing SRX7811024. (16/40)
2021-08-13 17:30:58 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-13 17:31:26 [INFO] Processing SRX7811021. (17/40)
2021-08-13 17:31:26 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-13 17:31:56 [INFO] Processing SRX7811002. (18/40)
2021-08-13 17:31:56 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-13 17:32:16 [INFO] Processing SRX7810996. (19/40)
2021-08-13 17:32:16 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-13 17:32:26 [INFO] Processing SRX7810986. (20/40)
2021-08-13 17:32:26 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-13 17:32:38 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-13 17:32:58 [INFO] Processing SRX7811010. (21/40)
2021-08-13 17:32:58 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-13 17:33:31 [INFO] Writing to disk...
2021-08-13 17:34:05 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-13 17:34:31 [INFO] Processing SRX7811001. (22/40)
2021-08-13 17:34:31 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-13 17:34:57 [INFO] Processing SRX7811007. (23/40)
2021-08-13 17:34:57 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-13 17:35:10 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-13 17:35:23 [INFO] Processing SRX7811017. (24/40)
2021-08-13 17:35:23 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-13 17:35:43 [INFO] Processing SRX7810992. (25/40)
2021-08-13 17:35:43 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-13 17:36:07 [INFO] Processing SRX7811023. (26/40)
2021-08-13 17:36:07 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-13 17:36:47 [INFO] Processing SRX7810990. (27/40)
2021-08-13 17:36:47 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-13 17:37:07 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-13 17:37:24 [INFO] Processing SRX7810994. (28/40)
2021-08-13 17:37:24 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-13 17:37:37 [INFO] Writing to disk...
2021-08-13 17:38:38 [INFO] Processing SRX7811025. (29/40)
2021-08-13 17:38:38 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-13 17:39:04 [INFO] Processing SRX7811019. (30/40)
2021-08-13 17:39:04 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-13 17:39:29 [INFO] Processing SRX7810993. (31/40)
2021-08-13 17:39:29 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-13 17:39:50 [INFO] Processing SRX7810999. (32/40)
2021-08-13 17:39:50 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-13 17:39:59 [INFO] Processing SRX7811003. (33/40)
2021-08-13 17:39:59 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-13 17:40:21 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-13 17:40:40 [INFO] Processing SRX7811008. (34/40)
2021-08-13 17:40:40 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-13 17:41:13 [INFO] Processing SRX7811012. (35/40)
2021-08-13 17:41:13 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-13 17:41:30 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-13 17:41:45 [INFO] Processing SRX7811018. (36/40)
2021-08-13 17:41:45 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-13 17:42:11 [INFO] Writing to disk...
2021-08-13 17:43:11 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-13 17:43:37 [INFO] Processing SRX7811009. (37/40)
2021-08-13 17:43:37 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-13 17:43:49 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-13 17:44:04 [INFO] Processing SRX7811011. (38/40)
2021-08-13 17:44:04 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-13 17:44:18 [INFO] Processing SRX7811004. (39/40)
2021-08-13 17:44:18 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-13 17:44:41 [INFO] Processing SRX7811020. (40/40)
2021-08-13 17:44:41 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-13 17:45:03 [INFO] Writing to disk...
2021-08-13 17:46:09 [INFO] Finished.
2021-08-16 11:36:51 [INFO] Starting.
2021-08-16 11:36:51 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-16 11:36:51 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-16 11:36:51 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:52 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:52 [INFO] Writing every 10 Runs.
2021-08-16 11:36:52 [INFO] Processing SRX7810991. (1/40)
2021-08-16 11:36:52 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-16 12:37:48 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-16 12:57:20 [INFO] Processing SRX7811000. (2/40)
2021-08-16 12:57:20 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-16 13:06:57 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-16 13:15:16 [INFO] Processing SRX7810989. (3/40)
2021-08-16 13:15:16 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-16 13:25:03 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-16 13:32:28 [INFO] Processing SRX7811014. (4/40)
2021-08-16 13:32:28 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-16 13:39:16 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-16 13:46:28 [INFO] Processing SRX7810997. (5/40)
2021-08-16 13:46:28 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-16 13:53:17 [INFO] Processing SRX7810987. (6/40)
2021-08-16 13:53:17 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-16 14:00:48 [INFO] Writing to disk...
2021-08-16 14:02:09 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-16 14:09:35 [INFO] Processing SRX7811015. (7/40)
2021-08-16 14:09:35 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-16 14:15:51 [INFO] Processing SRX7811016. (8/40)
2021-08-16 14:15:51 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-16 14:23:04 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-16 14:29:56 [INFO] Processing SRX7810998. (9/40)
2021-08-16 14:29:56 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-16 14:36:25 [INFO] Processing SRX7810988. (10/40)
2021-08-16 14:36:25 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-16 14:43:14 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-16 14:50:15 [INFO] Processing SRX7810995. (11/40)
2021-08-16 14:50:15 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-16 14:56:15 [INFO] Processing SRX7811005. (12/40)
2021-08-16 14:56:15 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-16 15:02:38 [INFO] Processing SRX7811006. (13/40)
2021-08-16 15:02:38 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-16 15:08:51 [INFO] Writing to disk...
2021-08-16 15:09:55 [INFO] Processing SRX7811013. (14/40)
2021-08-16 15:09:55 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-16 15:16:05 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-16 15:22:48 [INFO] Processing SRX7811022. (15/40)
2021-08-16 15:22:48 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-16 15:30:47 [INFO] Processing SRX7811024. (16/40)
2021-08-16 15:30:48 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-16 15:38:46 [INFO] Processing SRX7811021. (17/40)
2021-08-16 15:38:46 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-16 15:47:50 [INFO] Processing SRX7811002. (18/40)
2021-08-16 15:47:50 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-16 15:55:22 [INFO] Processing SRX7810996. (19/40)
2021-08-16 15:55:22 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-16 16:03:37 [INFO] Processing SRX7810986. (20/40)
2021-08-16 16:03:37 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-16 16:10:18 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-16 16:17:48 [INFO] Processing SRX7811010. (21/40)
2021-08-16 16:17:48 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-16 16:36:44 [INFO] Starting.
2021-08-16 16:36:44 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-16 16:36:44 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-16 16:36:44 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 16:36:45 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 16:36:45 [INFO] Writing every 10 Runs.
2021-08-16 16:36:45 [INFO] Processing SRX7810991. (1/40)
2021-08-16 16:36:45 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-16 16:40:37 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-16 16:47:40 [INFO] Processing SRX7811000. (2/40)
2021-08-16 16:47:40 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-16 16:54:52 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-16 17:02:01 [INFO] Processing SRX7810989. (3/40)
2021-08-16 17:02:01 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-16 17:09:04 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-16 17:16:10 [INFO] Processing SRX7811014. (4/40)
2021-08-16 17:16:10 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-16 17:23:08 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-16 17:30:08 [INFO] Processing SRX7810997. (5/40)
2021-08-16 17:30:08 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-16 17:37:06 [INFO] Processing SRX7810987. (6/40)
2021-08-16 17:37:06 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-16 17:44:02 [INFO] Writing to disk...
2021-08-16 17:44:52 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-16 17:52:08 [INFO] Processing SRX7811015. (7/40)
2021-08-16 17:52:08 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-16 17:59:11 [INFO] Processing SRX7811016. (8/40)
2021-08-16 17:59:11 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-16 18:10:06 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-16 18:19:56 [INFO] Processing SRX7810998. (9/40)
2021-08-16 18:19:56 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-16 18:29:04 [INFO] Processing SRX7810988. (10/40)
2021-08-16 18:29:04 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-16 18:39:47 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-16 18:50:35 [INFO] Processing SRX7810995. (11/40)
2021-08-16 18:50:35 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-16 18:58:36 [INFO] Processing SRX7811005. (12/40)
2021-08-16 18:58:36 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-16 19:06:03 [INFO] Processing SRX7811006. (13/40)
2021-08-16 19:06:03 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-16 19:14:26 [INFO] Writing to disk...
2021-08-16 19:17:16 [INFO] Processing SRX7811013. (14/40)
2021-08-16 19:17:16 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-16 19:27:09 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-16 19:35:49 [INFO] Processing SRX7811022. (15/40)
2021-08-16 19:35:50 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-16 19:45:27 [INFO] Processing SRX7811024. (16/40)
2021-08-16 19:45:27 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-16 19:54:15 [INFO] Processing SRX7811021. (17/40)
2021-08-16 19:54:15 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-16 20:03:07 [INFO] Processing SRX7811002. (18/40)
2021-08-16 20:03:07 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-16 20:12:04 [INFO] Processing SRX7810996. (19/40)
2021-08-16 20:12:04 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-16 20:20:49 [INFO] Processing SRX7810986. (20/40)
2021-08-16 20:20:49 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-16 20:29:10 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-16 20:39:29 [INFO] Processing SRX7811010. (21/40)
2021-08-16 20:39:29 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-16 20:48:42 [INFO] Writing to disk...
2021-08-16 20:50:27 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-16 20:59:31 [INFO] Processing SRX7811001. (22/40)
2021-08-16 20:59:31 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-16 21:08:42 [INFO] Processing SRX7811007. (23/40)
2021-08-16 21:08:42 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-16 21:20:56 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-16 21:28:23 [INFO] Processing SRX7811017. (24/40)
2021-08-16 21:28:23 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-16 21:35:48 [INFO] Processing SRX7810992. (25/40)
2021-08-16 21:35:48 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-16 21:43:33 [INFO] Processing SRX7811023. (26/40)
2021-08-16 21:43:33 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-16 21:51:22 [INFO] Processing SRX7810990. (27/40)
2021-08-16 21:51:22 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-16 21:58:50 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-16 22:06:20 [INFO] Processing SRX7810994. (28/40)
2021-08-16 22:06:20 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-16 22:13:40 [INFO] Writing to disk...
2021-08-16 22:15:13 [INFO] Processing SRX7811025. (29/40)
2021-08-16 22:15:13 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-16 22:22:42 [INFO] Processing SRX7811019. (30/40)
2021-08-16 22:22:42 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-16 22:30:16 [INFO] Processing SRX7810993. (31/40)
2021-08-16 22:30:16 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-16 22:37:42 [INFO] Processing SRX7810999. (32/40)
2021-08-16 22:37:42 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-16 22:44:59 [INFO] Processing SRX7811003. (33/40)
2021-08-16 22:44:59 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-16 22:52:37 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-16 23:00:00 [INFO] Processing SRX7811008. (34/40)
2021-08-16 23:00:00 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-16 23:07:34 [INFO] Processing SRX7811012. (35/40)
2021-08-16 23:07:34 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-16 23:15:10 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-16 23:22:38 [INFO] Processing SRX7811018. (36/40)
2021-08-16 23:22:38 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-16 23:30:16 [INFO] Writing to disk...
2021-08-16 23:32:08 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-16 23:39:47 [INFO] Processing SRX7811009. (37/40)
2021-08-16 23:39:47 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-16 23:47:06 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-16 23:54:34 [INFO] Processing SRX7811011. (38/40)
2021-08-16 23:54:34 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-17 00:02:02 [INFO] Processing SRX7811004. (39/40)
2021-08-17 00:02:02 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-17 00:09:33 [INFO] Processing SRX7811020. (40/40)
2021-08-17 00:09:33 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-17 00:17:08 [INFO] Writing to disk...
2021-08-17 00:19:07 [INFO] Finished.
2021-08-23 13:34:04 [INFO] Starting.
2021-08-23 13:34:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-23 13:34:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-23 13:34:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:04 [INFO] Writing every 10 Runs.
2021-08-23 13:34:04 [INFO] Processing SRX7810991. (1/40)
2021-08-23 13:34:04 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-23 13:34:10 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-23 13:34:16 [INFO] Processing SRX7811000. (2/40)
2021-08-23 13:34:16 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-23 13:34:23 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-23 13:34:30 [INFO] Processing SRX7810989. (3/40)
2021-08-23 13:34:30 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-23 13:34:40 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-23 13:34:45 [INFO] Processing SRX7811014. (4/40)
2021-08-23 13:34:45 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-23 13:34:48 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-23 13:34:53 [INFO] Processing SRX7810997. (5/40)
2021-08-23 13:34:53 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-23 13:34:55 [INFO] Processing SRX7810987. (6/40)
2021-08-23 13:34:55 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-23 13:34:59 [INFO] Writing to disk...
2021-08-23 13:35:01 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-23 13:35:12 [INFO] Processing SRX7811015. (7/40)
2021-08-23 13:35:12 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-23 13:35:14 [INFO] Processing SRX7811016. (8/40)
2021-08-23 13:35:14 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-23 13:35:26 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-23 13:35:36 [INFO] Processing SRX7810998. (9/40)
2021-08-23 13:35:36 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-23 13:35:39 [INFO] Processing SRX7810988. (10/40)
2021-08-23 13:35:39 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-23 13:35:44 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-23 13:35:59 [INFO] Processing SRX7810995. (11/40)
2021-08-23 13:35:59 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-23 13:36:02 [INFO] Processing SRX7811005. (12/40)
2021-08-23 13:36:02 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-23 13:36:13 [INFO] Processing SRX7811006. (13/40)
2021-08-23 13:36:13 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-23 13:36:24 [INFO] Writing to disk...
2021-08-23 13:36:33 [INFO] Processing SRX7811013. (14/40)
2021-08-23 13:36:33 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-23 13:36:39 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-23 13:36:42 [INFO] Processing SRX7811022. (15/40)
2021-08-23 13:36:42 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-23 13:36:54 [INFO] Processing SRX7811024. (16/40)
2021-08-23 13:36:54 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-23 13:37:04 [INFO] Processing SRX7811021. (17/40)
2021-08-23 13:37:04 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-23 13:37:16 [INFO] Processing SRX7811002. (18/40)
2021-08-23 13:37:16 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-23 13:37:25 [INFO] Processing SRX7810996. (19/40)
2021-08-23 13:37:25 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-23 13:37:27 [INFO] Processing SRX7810986. (20/40)
2021-08-23 13:37:27 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-23 13:37:31 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-23 13:37:38 [INFO] Processing SRX7811010. (21/40)
2021-08-23 13:37:38 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-23 13:37:54 [INFO] Writing to disk...
2021-08-23 13:38:08 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-23 13:38:18 [INFO] Processing SRX7811001. (22/40)
2021-08-23 13:38:18 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-23 13:38:26 [INFO] Processing SRX7811007. (23/40)
2021-08-23 13:38:26 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-23 13:38:29 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-23 13:38:34 [INFO] Processing SRX7811017. (24/40)
2021-08-23 13:38:34 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-23 13:38:42 [INFO] Processing SRX7810992. (25/40)
2021-08-23 13:38:42 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-23 13:38:54 [INFO] Processing SRX7811023. (26/40)
2021-08-23 13:38:54 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-23 13:39:08 [INFO] Processing SRX7810990. (27/40)
2021-08-23 13:39:08 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-23 13:39:13 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-23 13:39:19 [INFO] Processing SRX7810994. (28/40)
2021-08-23 13:39:19 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-23 13:39:22 [INFO] Writing to disk...
2021-08-23 13:39:37 [INFO] Processing SRX7811025. (29/40)
2021-08-23 13:39:37 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-23 13:39:47 [INFO] Processing SRX7811019. (30/40)
2021-08-23 13:39:47 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-23 13:39:58 [INFO] Processing SRX7810993. (31/40)
2021-08-23 13:39:58 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-23 13:40:08 [INFO] Processing SRX7810999. (32/40)
2021-08-23 13:40:08 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-23 13:40:10 [INFO] Processing SRX7811003. (33/40)
2021-08-23 13:40:10 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-23 13:40:18 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-23 13:40:24 [INFO] Processing SRX7811008. (34/40)
2021-08-23 13:40:24 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-23 13:40:33 [INFO] Processing SRX7811012. (35/40)
2021-08-23 13:40:33 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-23 13:40:39 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-23 13:40:42 [INFO] Processing SRX7811018. (36/40)
2021-08-23 13:40:42 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-23 13:40:52 [INFO] Writing to disk...
2021-08-23 13:41:06 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-23 13:41:17 [INFO] Processing SRX7811009. (37/40)
2021-08-23 13:41:17 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-23 13:41:20 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-23 13:41:24 [INFO] Processing SRX7811011. (38/40)
2021-08-23 13:41:24 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-23 13:41:27 [INFO] Processing SRX7811004. (39/40)
2021-08-23 13:41:27 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-23 13:41:35 [INFO] Processing SRX7811020. (40/40)
2021-08-23 13:41:35 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-23 13:41:43 [INFO] Writing to disk...
2021-08-23 13:41:58 [INFO] Finished.
2021-08-30 12:45:57 [INFO] Starting.
2021-08-30 12:45:57 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-30 12:45:57 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-30 12:45:57 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:58 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:58 [INFO] Writing every 10 Runs.
2021-08-30 12:45:58 [INFO] Processing SRX7810991. (1/40)
2021-08-30 12:45:58 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-30 12:46:02 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-30 12:46:06 [INFO] Processing SRX7811000. (2/40)
2021-08-30 12:46:06 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-30 12:46:13 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-30 12:46:18 [INFO] Processing SRX7810989. (3/40)
2021-08-30 12:46:18 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-30 12:46:25 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-30 12:46:29 [INFO] Processing SRX7811014. (4/40)
2021-08-30 12:46:29 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-30 12:46:32 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-30 12:46:35 [INFO] Processing SRX7810997. (5/40)
2021-08-30 12:46:35 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-30 12:46:37 [INFO] Processing SRX7810987. (6/40)
2021-08-30 12:46:37 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-30 12:46:41 [INFO] Writing to disk...
2021-08-30 12:46:43 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-30 12:46:51 [INFO] Processing SRX7811015. (7/40)
2021-08-30 12:46:51 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-30 12:46:53 [INFO] Processing SRX7811016. (8/40)
2021-08-30 12:46:53 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-30 12:47:01 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-30 12:47:08 [INFO] Processing SRX7810998. (9/40)
2021-08-30 12:47:08 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-30 12:47:10 [INFO] Processing SRX7810988. (10/40)
2021-08-30 12:47:10 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-30 12:47:14 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-30 12:47:22 [INFO] Processing SRX7810995. (11/40)
2021-08-30 12:47:22 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-30 12:47:25 [INFO] Processing SRX7811005. (12/40)
2021-08-30 12:47:25 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-30 12:47:34 [INFO] Processing SRX7811006. (13/40)
2021-08-30 12:47:34 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-30 12:47:42 [INFO] Writing to disk...
2021-08-30 12:47:51 [INFO] Processing SRX7811013. (14/40)
2021-08-30 12:47:51 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-30 12:47:56 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-30 12:47:59 [INFO] Processing SRX7811022. (15/40)
2021-08-30 12:47:59 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-30 12:48:08 [INFO] Processing SRX7811024. (16/40)
2021-08-30 12:48:08 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-30 12:48:15 [INFO] Processing SRX7811021. (17/40)
2021-08-30 12:48:15 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-30 12:48:23 [INFO] Processing SRX7811002. (18/40)
2021-08-30 12:48:23 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-30 12:48:29 [INFO] Processing SRX7810996. (19/40)
2021-08-30 12:48:29 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-30 12:48:31 [INFO] Processing SRX7810986. (20/40)
2021-08-30 12:48:31 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-30 12:48:35 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-30 12:48:40 [INFO] Processing SRX7811010. (21/40)
2021-08-30 12:48:40 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-30 12:48:50 [INFO] Writing to disk...
2021-08-30 12:49:03 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-30 12:49:11 [INFO] Processing SRX7811001. (22/40)
2021-08-30 12:49:11 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-30 12:49:17 [INFO] Processing SRX7811007. (23/40)
2021-08-30 12:49:17 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-30 12:49:20 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-30 12:49:24 [INFO] Processing SRX7811017. (24/40)
2021-08-30 12:49:24 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-30 12:49:29 [INFO] Processing SRX7810992. (25/40)
2021-08-30 12:49:29 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-30 12:49:36 [INFO] Processing SRX7811023. (26/40)
2021-08-30 12:49:36 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-30 12:49:42 [INFO] Processing SRX7810990. (27/40)
2021-08-30 12:49:42 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-30 12:49:46 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-30 12:49:50 [INFO] Processing SRX7810994. (28/40)
2021-08-30 12:49:50 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-30 12:49:53 [INFO] Writing to disk...
2021-08-30 12:50:04 [INFO] Processing SRX7811025. (29/40)
2021-08-30 12:50:04 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-30 12:50:13 [INFO] Processing SRX7811019. (30/40)
2021-08-30 12:50:13 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-30 12:50:18 [INFO] Processing SRX7810993. (31/40)
2021-08-30 12:50:18 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-30 12:50:25 [INFO] Processing SRX7810999. (32/40)
2021-08-30 12:50:25 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-30 12:50:27 [INFO] Processing SRX7811003. (33/40)
2021-08-30 12:50:27 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-30 12:50:33 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-30 12:50:38 [INFO] Processing SRX7811008. (34/40)
2021-08-30 12:50:38 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-30 12:50:45 [INFO] Processing SRX7811012. (35/40)
2021-08-30 12:50:45 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-30 12:50:49 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-30 12:50:52 [INFO] Processing SRX7811018. (36/40)
2021-08-30 12:50:52 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-30 12:50:59 [INFO] Writing to disk...
2021-08-30 12:51:02 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-30 12:51:09 [INFO] Processing SRX7811009. (37/40)
2021-08-30 12:51:09 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-30 12:51:11 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-30 12:51:14 [INFO] Processing SRX7811011. (38/40)
2021-08-30 12:51:14 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-30 12:51:18 [INFO] Processing SRX7811004. (39/40)
2021-08-30 12:51:18 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-30 12:51:23 [INFO] Processing SRX7811020. (40/40)
2021-08-30 12:51:23 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-30 12:51:29 [INFO] Writing to disk...
2021-08-30 12:51:31 [INFO] Finished.
2021-08-30 21:25:20 [INFO] Starting.
2021-08-30 21:25:20 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/
2021-08-30 21:25:20 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP250878/aggregate.hdf5
2021-08-30 21:25:20 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:25:21 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:25:21 [INFO] Writing every 10 Runs.
2021-08-30 21:25:21 [INFO] Processing SRX7810991. (1/40)
2021-08-30 21:25:21 [INFO] Processing SRX7810991-SRR11190813. (1/56)
2021-08-30 21:25:25 [INFO] Processing SRX7810991-SRR11190814. (2/56)
2021-08-30 21:25:29 [INFO] Processing SRX7811000. (2/40)
2021-08-30 21:25:29 [INFO] Processing SRX7811000-SRR11190824. (3/56)
2021-08-30 21:25:34 [INFO] Processing SRX7811000-SRR11190823. (4/56)
2021-08-30 21:25:39 [INFO] Processing SRX7810989. (3/40)
2021-08-30 21:25:39 [INFO] Processing SRX7810989-SRR11190810. (5/56)
2021-08-30 21:25:44 [INFO] Processing SRX7810989-SRR11190809. (6/56)
2021-08-30 21:25:47 [INFO] Processing SRX7811014. (4/40)
2021-08-30 21:25:47 [INFO] Processing SRX7811014-SRR11190844. (7/56)
2021-08-30 21:25:49 [INFO] Processing SRX7811014-SRR11190845. (8/56)
2021-08-30 21:25:51 [INFO] Processing SRX7810997. (5/40)
2021-08-30 21:25:51 [INFO] Processing SRX7810997-SRR11190820. (9/56)
2021-08-30 21:25:53 [INFO] Processing SRX7810987. (6/40)
2021-08-30 21:25:53 [INFO] Processing SRX7810987-SRR11190805. (10/56)
2021-08-30 21:25:56 [INFO] Writing to disk...
2021-08-30 21:25:57 [INFO] Processing SRX7810987-SRR11190806. (11/56)
2021-08-30 21:26:02 [INFO] Processing SRX7811015. (7/40)
2021-08-30 21:26:02 [INFO] Processing SRX7811015-SRR11190846. (12/56)
2021-08-30 21:26:04 [INFO] Processing SRX7811016. (8/40)
2021-08-30 21:26:04 [INFO] Processing SRX7811016-SRR11190848. (13/56)
2021-08-30 21:26:10 [INFO] Processing SRX7811016-SRR11190847. (14/56)
2021-08-30 21:26:15 [INFO] Processing SRX7810998. (9/40)
2021-08-30 21:26:15 [INFO] Processing SRX7810998-SRR11190821. (15/56)
2021-08-30 21:26:17 [INFO] Processing SRX7810988. (10/40)
2021-08-30 21:26:17 [INFO] Processing SRX7810988-SRR11190807. (16/56)
2021-08-30 21:26:20 [INFO] Processing SRX7810988-SRR11190808. (17/56)
2021-08-30 21:26:26 [INFO] Processing SRX7810995. (11/40)
2021-08-30 21:26:26 [INFO] Processing SRX7810995-SRR11190818. (18/56)
2021-08-30 21:26:28 [INFO] Processing SRX7811005. (12/40)
2021-08-30 21:26:28 [INFO] Processing SRX7811005-SRR11190830. (19/56)
2021-08-30 21:26:35 [INFO] Processing SRX7811006. (13/40)
2021-08-30 21:26:35 [INFO] Processing SRX7811006-SRR11190831. (20/56)
2021-08-30 21:26:41 [INFO] Writing to disk...
2021-08-30 21:26:43 [INFO] Processing SRX7811013. (14/40)
2021-08-30 21:26:43 [INFO] Processing SRX7811013-SRR11190843. (21/56)
2021-08-30 21:26:46 [INFO] Processing SRX7811013-SRR11190842. (22/56)
2021-08-30 21:26:48 [INFO] Processing SRX7811022. (15/40)
2021-08-30 21:26:48 [INFO] Processing SRX7811022-SRR11190855. (23/56)
2021-08-30 21:26:53 [INFO] Processing SRX7811024. (16/40)
2021-08-30 21:26:53 [INFO] Processing SRX7811024-SRR11190857. (24/56)
2021-08-30 21:26:58 [INFO] Processing SRX7811021. (17/40)
2021-08-30 21:26:58 [INFO] Processing SRX7811021-SRR11190854. (25/56)
2021-08-30 21:27:04 [INFO] Processing SRX7811002. (18/40)
2021-08-30 21:27:04 [INFO] Processing SRX7811002-SRR11190826. (26/56)
2021-08-30 21:27:09 [INFO] Processing SRX7810996. (19/40)
2021-08-30 21:27:09 [INFO] Processing SRX7810996-SRR11190819. (27/56)
2021-08-30 21:27:11 [INFO] Processing SRX7810986. (20/40)
2021-08-30 21:27:11 [INFO] Processing SRX7810986-SRR11190803. (28/56)
2021-08-30 21:27:14 [INFO] Processing SRX7810986-SRR11190804. (29/56)
2021-08-30 21:27:17 [INFO] Processing SRX7811010. (21/40)
2021-08-30 21:27:17 [INFO] Processing SRX7811010-SRR11190838. (30/56)
2021-08-30 21:27:24 [INFO] Writing to disk...
2021-08-30 21:27:30 [INFO] Processing SRX7811010-SRR11190837. (31/56)
2021-08-30 21:27:35 [INFO] Processing SRX7811001. (22/40)
2021-08-30 21:27:35 [INFO] Processing SRX7811001-SRR11190825. (32/56)
2021-08-30 21:27:39 [INFO] Processing SRX7811007. (23/40)
2021-08-30 21:27:39 [INFO] Processing SRX7811007-SRR11190833. (33/56)
2021-08-30 21:27:42 [INFO] Processing SRX7811007-SRR11190832. (34/56)
2021-08-30 21:27:45 [INFO] Processing SRX7811017. (24/40)
2021-08-30 21:27:45 [INFO] Processing SRX7811017-SRR11190849. (35/56)
2021-08-30 21:27:49 [INFO] Processing SRX7810992. (25/40)
2021-08-30 21:27:49 [INFO] Processing SRX7810992-SRR11190815. (36/56)
2021-08-30 21:27:54 [INFO] Processing SRX7811023. (26/40)
2021-08-30 21:27:54 [INFO] Processing SRX7811023-SRR11190856. (37/56)
2021-08-30 21:28:00 [INFO] Processing SRX7810990. (27/40)
2021-08-30 21:28:00 [INFO] Processing SRX7810990-SRR11190812. (38/56)
2021-08-30 21:28:03 [INFO] Processing SRX7810990-SRR11190811. (39/56)
2021-08-30 21:28:06 [INFO] Processing SRX7810994. (28/40)
2021-08-30 21:28:06 [INFO] Processing SRX7810994-SRR11190817. (40/56)
2021-08-30 21:28:08 [INFO] Writing to disk...
2021-08-30 21:28:11 [INFO] Processing SRX7811025. (29/40)
2021-08-30 21:28:11 [INFO] Processing SRX7811025-SRR11190858. (41/56)
2021-08-30 21:28:17 [INFO] Processing SRX7811019. (30/40)
2021-08-30 21:28:17 [INFO] Processing SRX7811019-SRR11190852. (42/56)
2021-08-30 21:28:22 [INFO] Processing SRX7810993. (31/40)
2021-08-30 21:28:22 [INFO] Processing SRX7810993-SRR11190816. (43/56)
2021-08-30 21:28:26 [INFO] Processing SRX7810999. (32/40)
2021-08-30 21:28:26 [INFO] Processing SRX7810999-SRR11190822. (44/56)
2021-08-30 21:28:28 [INFO] Processing SRX7811003. (33/40)
2021-08-30 21:28:28 [INFO] Processing SRX7811003-SRR11190828. (45/56)
2021-08-30 21:28:33 [INFO] Processing SRX7811003-SRR11190827. (46/56)
2021-08-30 21:28:38 [INFO] Processing SRX7811008. (34/40)
2021-08-30 21:28:38 [INFO] Processing SRX7811008-SRR11190834. (47/56)
2021-08-30 21:28:44 [INFO] Processing SRX7811012. (35/40)
2021-08-30 21:28:44 [INFO] Processing SRX7811012-SRR11190841. (48/56)
2021-08-30 21:28:48 [INFO] Processing SRX7811012-SRR11190840. (49/56)
2021-08-30 21:28:51 [INFO] Processing SRX7811018. (36/40)
2021-08-30 21:28:51 [INFO] Processing SRX7811018-SRR11190850. (50/56)
2021-08-30 21:28:56 [INFO] Writing to disk...
2021-08-30 21:29:00 [INFO] Processing SRX7811018-SRR11190851. (51/56)
2021-08-30 21:29:06 [INFO] Processing SRX7811009. (37/40)
2021-08-30 21:29:06 [INFO] Processing SRX7811009-SRR11190836. (52/56)
2021-08-30 21:29:08 [INFO] Processing SRX7811009-SRR11190835. (53/56)
2021-08-30 21:29:11 [INFO] Processing SRX7811011. (38/40)
2021-08-30 21:29:11 [INFO] Processing SRX7811011-SRR11190839. (54/56)
2021-08-30 21:29:13 [INFO] Processing SRX7811004. (39/40)
2021-08-30 21:29:13 [INFO] Processing SRX7811004-SRR11190829. (55/56)
2021-08-30 21:29:17 [INFO] Processing SRX7811020. (40/40)
2021-08-30 21:29:17 [INFO] Processing SRX7811020-SRR11190853. (56/56)
2021-08-30 21:29:20 [INFO] Writing to disk...
2021-08-30 21:29:21 [INFO] Finished.