2021-08-02 14:43:29 [INFO] Starting.
2021-08-02 14:43:29 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-02 14:43:29 [INFO] Creating new aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-02 14:43:29 [INFO] Using chromosome sizes at /grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes
2021-08-02 14:43:29 [INFO] Using only main chromosomes: chr1, chr2, chrX, chr3, chr4, chr5, chr6, chr7, chr10, chr8, chr14, chr9, chr11, chr13, chr12, chr15, chr16, chr17, chrY, chr18, chr19, chrM
2021-08-02 14:43:30 [INFO] Building aggregate.
2021-08-02 14:43:30 [INFO] Writing every 10 Runs.
2021-08-02 14:43:30 [INFO] Processing SRX9184925. (1/4)
2021-08-02 14:43:30 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-02 14:43:42 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-02 14:43:53 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-02 14:44:05 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-02 14:44:18 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-02 14:44:31 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-02 14:44:42 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-02 14:44:57 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-02 14:45:10 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-02 14:45:23 [INFO] Processing SRX9184924. (2/4)
2021-08-02 14:45:23 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-02 14:45:36 [INFO] Writing to disk...
2021-08-02 14:45:39 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-02 14:45:54 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-02 14:46:11 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-02 14:46:45 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-02 14:47:01 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-02 14:47:18 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-02 14:47:33 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-02 14:47:51 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-02 14:48:09 [INFO] Processing SRX9184926. (3/4)
2021-08-02 14:48:09 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-02 14:48:28 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-02 14:48:48 [INFO] Writing to disk...
2021-08-02 14:49:01 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-02 14:49:40 [INFO] Processing SRX9184923. (4/4)
2021-08-02 14:49:40 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-02 14:50:13 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-02 14:50:31 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-02 14:50:48 [INFO] Writing to disk...
2021-08-02 14:51:03 [INFO] Finished.
2021-08-12 14:31:21 [INFO] Starting.
2021-08-12 14:31:21 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-12 14:31:21 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-12 14:31:21 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 14:31:21 [INFO] Building aggregate for 40kbp_raw network.
2021-08-12 14:31:21 [INFO] Writing every 10 Runs.
2021-08-12 14:31:21 [INFO] Processing SRX9184925. (1/4)
2021-08-12 14:31:21 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-12 14:31:34 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-12 14:31:47 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-12 14:32:03 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-12 14:32:18 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-12 14:32:36 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-12 14:32:50 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-12 14:33:04 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-12 14:33:18 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-12 14:33:34 [INFO] Processing SRX9184924. (2/4)
2021-08-12 14:33:34 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-12 14:33:52 [INFO] Writing to disk...
2021-08-12 14:33:54 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-12 14:34:14 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-12 14:34:32 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-12 14:35:14 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-12 14:35:33 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-12 14:35:50 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-12 14:36:10 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-12 14:36:27 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-12 14:36:46 [INFO] Processing SRX9184926. (3/4)
2021-08-12 14:36:46 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-12 14:37:03 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-12 14:37:20 [INFO] Writing to disk...
2021-08-12 14:37:34 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-12 14:38:38 [INFO] Processing SRX9184923. (4/4)
2021-08-12 14:38:38 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-12 14:39:13 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-12 14:39:32 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-12 14:39:48 [INFO] Writing to disk...
2021-08-12 14:40:08 [INFO] Finished.
2021-08-12 16:36:37 [INFO] Starting.
2021-08-12 16:36:37 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-12 16:36:37 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-12 16:36:37 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-12 16:36:38 [INFO] Building aggregate for 25kbp_raw network.
2021-08-12 16:36:38 [INFO] Writing every 10 Runs.
2021-08-12 16:36:38 [INFO] Processing SRX9184925. (1/4)
2021-08-12 16:36:38 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-12 16:36:55 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-12 16:37:10 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-12 16:37:27 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-12 16:37:48 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-12 16:38:08 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-12 16:38:25 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-12 16:38:41 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-12 16:38:56 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-12 16:39:12 [INFO] Processing SRX9184924. (2/4)
2021-08-12 16:39:12 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-12 16:39:31 [INFO] Writing to disk...
2021-08-12 16:39:33 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-12 16:39:50 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-12 16:40:06 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-12 16:40:53 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-12 16:41:17 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-12 16:41:38 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-12 16:41:56 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-12 16:42:16 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-12 16:42:36 [INFO] Processing SRX9184926. (3/4)
2021-08-12 16:42:36 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-12 16:42:56 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-12 16:43:15 [INFO] Writing to disk...
2021-08-12 16:43:27 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-12 16:44:10 [INFO] Processing SRX9184923. (4/4)
2021-08-12 16:44:10 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-12 16:44:48 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-12 16:45:08 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-12 16:45:28 [INFO] Writing to disk...
2021-08-12 16:45:45 [INFO] Finished.
2021-08-13 09:44:54 [INFO] Starting.
2021-08-13 09:44:54 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-13 09:44:54 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-13 09:44:54 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 09:44:54 [INFO] Building aggregate for 5kbp_raw network.
2021-08-13 09:44:54 [INFO] Writing every 10 Runs.
2021-08-13 09:44:54 [INFO] Processing SRX9184925. (1/4)
2021-08-13 09:44:54 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-13 09:45:04 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-13 09:45:17 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-13 09:45:26 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-13 09:45:37 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-13 09:45:49 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-13 09:46:00 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-13 09:46:10 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-13 09:46:21 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-13 09:46:33 [INFO] Processing SRX9184924. (2/4)
2021-08-13 09:46:33 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-13 09:46:47 [INFO] Writing to disk...
2021-08-13 09:46:50 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-13 09:47:04 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-13 09:47:19 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-13 09:47:50 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-13 09:48:05 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-13 09:48:17 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-13 09:48:31 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-13 09:48:46 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-13 09:49:03 [INFO] Processing SRX9184926. (3/4)
2021-08-13 09:49:03 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-13 09:49:23 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-13 09:49:40 [INFO] Writing to disk...
2021-08-13 09:49:53 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-13 09:50:31 [INFO] Processing SRX9184923. (4/4)
2021-08-13 09:50:31 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-13 09:51:11 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-13 09:51:30 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-13 09:51:49 [INFO] Writing to disk...
2021-08-13 09:52:08 [INFO] Finished.
2021-08-13 17:24:53 [INFO] Starting.
2021-08-13 17:24:53 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-13 17:24:53 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-13 17:24:53 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-13 17:24:54 [INFO] Building aggregate for 1kbp_raw network.
2021-08-13 17:24:54 [INFO] Writing every 10 Runs.
2021-08-13 17:24:54 [INFO] Processing SRX9184925. (1/4)
2021-08-13 17:24:54 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-13 17:25:11 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-13 17:25:29 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-13 17:25:47 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-13 17:26:04 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-13 17:26:24 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-13 17:26:43 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-13 17:26:59 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-13 17:27:15 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-13 17:27:34 [INFO] Processing SRX9184924. (2/4)
2021-08-13 17:27:34 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-13 17:28:00 [INFO] Writing to disk...
2021-08-13 17:28:05 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-13 17:28:26 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-13 17:28:51 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-13 17:29:51 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-13 17:30:16 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-13 17:30:44 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-13 17:31:08 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-13 17:31:33 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-13 17:31:57 [INFO] Processing SRX9184926. (3/4)
2021-08-13 17:31:57 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-13 17:32:26 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-13 17:32:57 [INFO] Writing to disk...
2021-08-13 17:33:26 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-13 17:34:35 [INFO] Processing SRX9184923. (4/4)
2021-08-13 17:34:35 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-13 17:35:44 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-13 17:36:15 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-13 17:36:45 [INFO] Writing to disk...
2021-08-13 17:37:20 [INFO] Finished.
2021-08-16 11:36:46 [INFO] Starting.
2021-08-16 11:36:46 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-16 11:36:46 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-16 11:36:46 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-16 11:36:46 [INFO] Building aggregate for 1bp_raw network.
2021-08-16 11:36:46 [INFO] Writing every 10 Runs.
2021-08-16 11:36:46 [INFO] Processing SRX9184925. (1/4)
2021-08-16 11:36:46 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-16 11:45:54 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-17 00:48:12 [INFO] Starting.
2021-08-17 00:48:12 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-17 00:48:12 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-17 00:48:12 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-17 00:48:13 [INFO] Building aggregate for 1bp_raw network.
2021-08-17 00:48:13 [INFO] Writing every 10 Runs.
2021-08-17 00:48:13 [INFO] Processing SRX9184925. (1/4)
2021-08-17 00:48:13 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-17 00:50:51 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-17 00:56:17 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-17 01:01:44 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-17 01:07:09 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-17 01:12:38 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-17 01:18:03 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-17 01:23:28 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-17 01:28:54 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-17 01:34:22 [INFO] Processing SRX9184924. (2/4)
2021-08-17 01:34:22 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-17 01:39:52 [INFO] Writing to disk...
2021-08-17 01:40:23 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-17 01:45:55 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-17 01:51:26 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-17 01:57:19 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-17 02:02:52 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-17 02:08:28 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-17 02:14:02 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-17 02:19:36 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-17 02:25:12 [INFO] Processing SRX9184926. (3/4)
2021-08-17 02:25:12 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-17 02:30:49 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-17 02:36:29 [INFO] Writing to disk...
2021-08-17 02:37:14 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-17 02:43:16 [INFO] Processing SRX9184923. (4/4)
2021-08-17 02:43:16 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-17 02:49:14 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-17 02:54:58 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-17 03:00:42 [INFO] Writing to disk...
2021-08-17 03:01:41 [INFO] Finished.
2021-08-23 13:34:04 [INFO] Starting.
2021-08-23 13:34:04 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-23 13:34:04 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-23 13:34:04 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-23 13:34:04 [INFO] Building aggregate for 100kbp_raw network.
2021-08-23 13:34:04 [INFO] Writing every 10 Runs.
2021-08-23 13:34:04 [INFO] Processing SRX9184925. (1/4)
2021-08-23 13:34:04 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-23 13:34:15 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-23 13:34:23 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-23 13:34:32 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-23 13:34:40 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-23 13:34:52 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-23 13:35:01 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-23 13:35:11 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-23 13:35:19 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-23 13:35:29 [INFO] Processing SRX9184924. (2/4)
2021-08-23 13:35:29 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-23 13:35:40 [INFO] Writing to disk...
2021-08-23 13:35:42 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-23 13:35:53 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-23 13:36:07 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-23 13:36:35 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-23 13:36:49 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-23 13:37:00 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-23 13:37:13 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-23 13:37:25 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-23 13:37:38 [INFO] Processing SRX9184926. (3/4)
2021-08-23 13:37:38 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-23 13:37:51 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-23 13:38:02 [INFO] Writing to disk...
2021-08-23 13:38:13 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-23 13:38:38 [INFO] Processing SRX9184923. (4/4)
2021-08-23 13:38:38 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-23 13:39:01 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-23 13:39:12 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-23 13:39:23 [INFO] Writing to disk...
2021-08-23 13:39:36 [INFO] Finished.
2021-08-30 12:45:58 [INFO] Starting.
2021-08-30 12:45:58 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-30 12:45:58 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-30 12:45:58 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 12:45:59 [INFO] Building aggregate for 250kbp_raw network.
2021-08-30 12:45:59 [INFO] Writing every 10 Runs.
2021-08-30 12:45:59 [INFO] Processing SRX9184925. (1/4)
2021-08-30 12:45:59 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-30 12:46:05 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-30 12:46:11 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-30 12:46:16 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-30 12:46:23 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-30 12:46:32 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-30 12:46:39 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-30 12:46:45 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-30 12:46:50 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-30 12:46:57 [INFO] Processing SRX9184924. (2/4)
2021-08-30 12:46:57 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-30 12:47:06 [INFO] Writing to disk...
2021-08-30 12:47:07 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-30 12:47:14 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-30 12:47:24 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-30 12:47:38 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-30 12:47:45 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-30 12:47:51 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-30 12:48:00 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-30 12:48:08 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-30 12:48:15 [INFO] Processing SRX9184926. (3/4)
2021-08-30 12:48:15 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-30 12:48:24 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-30 12:48:31 [INFO] Writing to disk...
2021-08-30 12:48:35 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-30 12:48:50 [INFO] Processing SRX9184923. (4/4)
2021-08-30 12:48:50 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-30 12:49:05 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-30 12:49:11 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-30 12:49:20 [INFO] Writing to disk...
2021-08-30 12:49:21 [INFO] Finished.
2021-08-30 21:28:28 [INFO] Starting.
2021-08-30 21:28:28 [INFO] Processing /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/
2021-08-30 21:28:28 [INFO] Appending to existing aggregate : /grid/gillis/data/nfox/hi_c_data_processing/data_mouse/SRP252213/aggregate.hdf5
2021-08-30 21:28:28 [WARNING] chroms=/grid/gillis/data/nfox/genomes/mus_musculus_10/mm10.chrom.sizes is ignored due to existing aggregate.
2021-08-30 21:28:29 [INFO] Building aggregate for 500kbp_raw network.
2021-08-30 21:28:29 [INFO] Writing every 10 Runs.
2021-08-30 21:28:29 [INFO] Processing SRX9184925. (1/4)
2021-08-30 21:28:29 [INFO] Processing SRX9184925-SRR12705866. (1/24)
2021-08-30 21:28:35 [INFO] Processing SRX9184925-SRR12705870. (2/24)
2021-08-30 21:28:38 [INFO] Processing SRX9184925-SRR12705867. (3/24)
2021-08-30 21:28:44 [INFO] Processing SRX9184925-SRR12705872. (4/24)
2021-08-30 21:28:50 [INFO] Processing SRX9184925-SRR12705865. (5/24)
2021-08-30 21:28:56 [INFO] Processing SRX9184925-SRR12705868. (6/24)
2021-08-30 21:29:01 [INFO] Processing SRX9184925-SRR12705869. (7/24)
2021-08-30 21:29:05 [INFO] Processing SRX9184925-SRR12705871. (8/24)
2021-08-30 21:29:10 [INFO] Processing SRX9184925-SRR12705873. (9/24)
2021-08-30 21:29:14 [INFO] Processing SRX9184924. (2/4)
2021-08-30 21:29:14 [INFO] Processing SRX9184924-SRR12705863. (10/24)
2021-08-30 21:29:20 [INFO] Writing to disk...
2021-08-30 21:29:21 [INFO] Processing SRX9184924-SRR12705864. (11/24)
2021-08-30 21:29:28 [INFO] Processing SRX9184924-SRR12705857. (12/24)
2021-08-30 21:29:34 [INFO] Processing SRX9184924-SRR12705856. (13/24)
2021-08-30 21:29:41 [INFO] Processing SRX9184924-SRR12705861. (14/24)
2021-08-30 21:29:47 [INFO] Processing SRX9184924-SRR12705858. (15/24)
2021-08-30 21:29:53 [INFO] Processing SRX9184924-SRR12705862. (16/24)
2021-08-30 21:30:00 [INFO] Processing SRX9184924-SRR12705859. (17/24)
2021-08-30 21:30:05 [INFO] Processing SRX9184924-SRR12705860. (18/24)
2021-08-30 21:30:11 [INFO] Processing SRX9184926. (3/4)
2021-08-30 21:30:11 [INFO] Processing SRX9184926-SRR12705875. (19/24)
2021-08-30 21:30:18 [INFO] Processing SRX9184926-SRR12705876. (20/24)
2021-08-30 21:30:24 [INFO] Writing to disk...
2021-08-30 21:30:25 [INFO] Processing SRX9184926-SRR12705874. (21/24)
2021-08-30 21:30:32 [INFO] Processing SRX9184923. (4/4)
2021-08-30 21:30:32 [INFO] Processing SRX9184923-SRR12705853. (22/24)
2021-08-30 21:30:39 [INFO] Processing SRX9184923-SRR12705854. (23/24)
2021-08-30 21:30:45 [INFO] Processing SRX9184923-SRR12705855. (24/24)
2021-08-30 21:30:51 [INFO] Writing to disk...
2021-08-30 21:30:52 [INFO] Finished.