LICENSE
MANIFEST.in
NEWS.rst
README.rst
pyproject.toml
setup.cfg
setup.py
docs/Makefile
docs/about.rst
docs/api.rst
docs/conf.py
docs/index.rst
docs/install.rst
docs/news.rst
docs/requirements.txt
docs/tutorials.rst
docs/_static/advanced_thumbnail.png
docs/_static/annotation_model.png
docs/_static/annotation_thumbnail.png
docs/_static/custom.css
docs/_static/model_training.png
docs/_static/query_model.png
docs/_static/search_engine.png
docs/_static/search_thumbnail_1.png
docs/_static/search_thumbnail_2.png
docs/_static/search_thumbnail_3.png
docs/modules/cell_annotation.rst
docs/modules/cell_embedding.rst
docs/modules/cell_query.rst
docs/modules/data_models.rst
docs/modules/interpreter.rst
docs/modules/nn_models.rst
docs/modules/ontologies.rst
docs/modules/training_models.rst
docs/modules/triplet_selector.rst
docs/modules/utils.rst
docs/modules/visualizations.rst
docs/modules/zarr_data_models.rst
docs/modules/zarr_dataset.rst
docs/notebooks/advanced_tutorial.ipynb
docs/notebooks/cell_annotation_tutorial.ipynb
docs/notebooks/cell_search_tutorial_1.ipynb
docs/notebooks/cell_search_tutorial_2.ipynb
docs/notebooks/cell_search_tutorial_3.ipynb
src/scimilarity/__init__.py
src/scimilarity/cell_annotation.py
src/scimilarity/cell_embedding.py
src/scimilarity/cell_query.py
src/scimilarity/cell_search_knn.py
src/scimilarity/data_models.py
src/scimilarity/interpreter.py
src/scimilarity/nn_models.py
src/scimilarity/ontologies.py
src/scimilarity/training_models.py
src/scimilarity/triplet_selector.py
src/scimilarity/utils.py
src/scimilarity/visualizations.py
src/scimilarity/zarr_data_models.py
src/scimilarity/zarr_dataset.py
src/scimilarity.egg-info/PKG-INFO
src/scimilarity.egg-info/SOURCES.txt
src/scimilarity.egg-info/dependency_links.txt
src/scimilarity.egg-info/not-zip-safe
src/scimilarity.egg-info/requires.txt
src/scimilarity.egg-info/top_level.txt