# This file created by conda-build 2.0.7
# meta.yaml template originally from:
# /opt/recipe, last modified Wed Dec  7 13:00:53 2016
# ------------------------------------------------

package:
    name: sra-tools
    version: 2.8.0
source:
    fn: sra-tools-2.8.0.tar.gz
    sha256: 86e63e8838eec08da04ed255ff36bbfcc1e60a239cb1f4b80306dfd5a99de352
    url: https://github.com/ncbi/sra-tools/archive/2.8.0-1.tar.gz
build:
    number: '0'
requirements:
    build:
        - gcc
        - perl
        - libiconv
        - libxml2
    run: ''
test:
    commands:
        - fastq-dump --help > /dev/null
        - prefetch --help > /dev/null
        - sam-dump --help > /dev/null
        - sra-pileup --help > /dev/null
        - vdb-config --help > /dev/null
        - vdb-decrypt --help > /dev/null
        - fastq-dump -N 1 -X 1 SRR000001 && grep '@SRR000001.1' SRR000001.fastq
about:
    home: https://github.com/ncbi/sra-tools
    license: Public Domain
    summary: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries
        for using data in the INSDC Sequence Read Archives.
extra:
    notes: 'This package includes ncbi-vdb and ngs-sdk. After installation, you should
        run the configuration tool: ./vdb-config -i. This tool will setup your download/cache
        area for downloaded files and references.'