# Load libraries library(Seurat) library(SeuratDisk) library(zellkonverter) # Let's load the h5ad file first my_data <- readH5AD(file = "/home/youkim/adata_all_donors_all_cell_states_raw_counts_in_raw_normlog_counts_in_X_for_download_UPD_20230307.h5ad", X_name = "X") my_data@assays # Convert the SCE object into a Seurat object my_data <- as.Seurat(my_data, counts = my_data@assays@data$X) my_data@assays@data$X assays(my_data)