PeakID (cmd=annotatePeaks.pl S17_S17_SEACR.relaxed.bed hg38 -annStats S17_S17_SEACR.relaxed.log) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type 3.99055e+06 chrUn_KI270438v1 108611 110654 + 10014.1 NA NA (GGAATGGAAT)n|Simple_repeat|Simple_repeat NA NA 2.93353e+06 chr16 34587954 34588681 + 8345.12 NA Intergenic Intergenic -206837 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo 3013553 chr4 49709431 49711905 + 8257.28 NA Intergenic SAR|Satellite|Satellite 724026 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 902415 chr17_KI270729v1_random 27483 28074 + 6061.19 NA NA (GAATG)n|Satellite|Satellite NA NA 2.24097e+06 chr5 49599392 49600959 + 5446.29 NA Intergenic BSR/Beta|Satellite|Satellite 841113 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding 2078369 chrUn_KI270333v1 9 2677 + 5446.29 NA NA SAR|Satellite|Satellite NA NA 954067 chr17 25920033 25920470 + 5270.6 NA Intergenic ALR/Alpha|Satellite|centr 1168990 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 1.39882e+06 chr16 34592634 34593756 + 5094.92 NA Intergenic Intergenic -211715 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo 2794557 chrUn_KI270438v1 103607 106250 + 4392.17 NA NA (GGAATGGAAT)n|Simple_repeat|Simple_repeat NA NA 711619 chr4 49657274 49657798 + 3952.95 NA Intergenic (GAATG)n|Satellite|Satellite 670894 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 763534 chrUn_KI270336v1 400 1021 + 3689.42 NA NA SAR|Satellite|Satellite NA NA 1.56835e+06 chr14_GL000225v1_random 67048 68405 + 3513.73 NA NA BSR/Beta|Satellite|Satellite NA NA 2661913 chr20 31066874 31069432 + 3513.73 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -189511 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 1.37624e+06 chrUn_GL000216v2 23 948 + 3250.2 NA NA (ATTCC)n|Simple_repeat|Simple_repeat NA NA 674461 chr14_GL000225v1_random 129559 130769 + 2810.99 NA NA BSR/Beta|Satellite|Satellite NA NA 905752 chr16 46393892 46395375 + 2723.14 NA Intergenic Intergenic 174464 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 491835 chr14_GL000225v1_random 92603 93071 + 2635.3 NA NA BSR/Beta|Satellite|Satellite NA NA 901097 chr20 31060043 31061841 + 2283.93 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -196722 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 893630 chr5 49666153 49667377 + 2108.24 NA Intergenic (CATTC)n|Satellite|Satellite 774523 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding 500883 chrUn_KI270337v1 290 969 + 2020.4 NA NA SAR|Satellite|Satellite NA NA 565975 chrUn_GL000216v2 149273 150403 + 1932.55 NA NA BSR/Beta|Satellite|Satellite NA NA 1286115 chr20 31053316 31056501 + 1932.55 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -202756 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 513620 chr4 49144260 49145145 + 1844.71 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 158060 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 1.44617e+06 chr17 26883172 26885538 + 1756.87 NA Intergenic ALR/Alpha|Satellite|centr 204886 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 569840 chr4 49120371 49121487 + 1756.87 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 134287 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 807368 chr4 49154169 49155053 + 1669.02 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 167969 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 2.48078e+06 chr10 38526712 38529913 + 1669.02 NA Intergenic Intergenic 100166 NR_024497 399744 Hs.497951 NM_001013665 LINC00999 - long intergenic non-protein coding RNA 999 ncRNA 843647 chrUn_KI270466v1 179 1233 + 1669.02 NA NA SAR|Satellite|Satellite NA NA 458630 chr4 49633316 49634587 + 1581.18 NA Intergenic (GAATG)n|Satellite|Satellite 647309 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 1224010 chr4 49148913 49151214 + 1581.18 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 163421 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 320892 chr14_GL000225v1_random 117370 118219 + 1581.18 NA NA BSR/Beta|Satellite|Satellite NA NA 603220 chr16 34585546 34586363 + 1493.34 NA Intergenic Intergenic -204474 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo 468996 chr4 49105075 49106064 + 1493.34 NA Intergenic (CATTC)n|Satellite|Satellite 118927 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 318168 chrY 11305048 11305657 + 1405.49 NA Intergenic BSR/Beta|Satellite|Satellite 1116238 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 559825 chr8 129714988 129716241 + 1405.49 NA Intergenic L1MEc|LINE|L1 -35375 NR_130917 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA 281538 chrUn_KI270438v1 112034 112503 + 1405.49 NA NA (GGAATGGAAT)n|Simple_repeat|Simple_repeat NA NA 492538 chr20 28494822 28496018 + 1405.49 NA Intergenic ALR/Alpha|Satellite|centr 107245 NR_132315 100289097 Hs.529357 NR_132315 ENSG00000282826 FRG1CP - FSHD region gene 1 family member C, pseudogene pseudo 365604 chr20 31184902 31185729 + 1405.49 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -72349 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 2588476 chr7 5063153 5069443 + 1317.65 NA 3' UTR (NM_021163, exon 5 of 5) 3' UTR (NM_021163, exon 5 of 5) -5762 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 431223 chr10 133688670 133690245 + 1317.65 NA Intergenic BSR/Beta|Satellite|Satellite -62662 NM_001080998 441581 Hs.690471 NM_001080998 ENSG00000225899 FRG2B - FSHD region gene 2 family member B protein-coding 1.16551e+06 chr10 43523126 43525926 + 1317.65 NA Intergenic Intergenic 43933 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 296647-4 chr8 122997492 122998123 + 1229.81 NA Intergenic Intergenic 27965 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding 378868 chr10 73318110 73319070 + 1229.81 NA intron (NM_001367801, intron 10 of 27) MIRb|SINE|MIR 40164 NM_001350933 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding 346630 chr17 67048352 67049235 + 1229.81 NA intron (NM_000727, intron 1 of 3) L1M4|LINE|L1 4239 NM_000727 786 Hs.147989 NM_000727 ENSG00000108878 CACNG1 CACNLG calcium voltage-gated channel auxiliary subunit gamma 1 protein-coding 252110 chr14 72768337 72768881 + 1229.81 NA intron (NM_001280544, intron 2 of 9) L1MD2|LINE|L1 124040 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 508086 chr7 3397564 3398749 + 1229.81 NA intron (NM_152744, intron 1 of 44) L1MB4|LINE|L1 96904 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 265726-3 chr9 138085417 138086179 + 1141.96 NA intron (NM_001243812, intron 35 of 45) L1MA5|LINE|L1 -40727 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA 243765-4 chr22 48934184 48934727 + 1141.96 NA Intergenic L1MB8|LINE|L1 67685 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA 1396709 chr7 6672644 6676969 + 1141.96 NA Intergenic AluY|SINE|Alu 32141 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 1.22647e+06 chr7 6687568 6690985 + 1141.96 NA 3' UTR (NM_016265, exon 5 of 5) 3' UTR (NM_016265, exon 5 of 5) 17671 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 1219970 chr8 124944405 124947670 + 1141.96 NA intron (NR_027321, intron 2 of 3) intron (NR_027321, intron 2 of 3) 4029 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA 346805 chrUn_KI270411v1 948 1782 + 1141.96 NA NA ALR/Alpha|Satellite|centr NA NA 1174817 chr7 6691334 6694235 + 1141.96 NA intron (NM_006956, intron 4 of 5) intron (NM_006956, intron 4 of 5) 14163 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 457488-2 chr8 82228271 82229291 + 1141.96 NA Intergenic L1MA4A|LINE|L1 -386495 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 698003 chr8 126603611 126605337 + 1141.96 NA Intergenic Charlie7|DNA|hAT-Charlie -45996 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 1767934 chr14 68529444 68533863 + 1141.96 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 97134 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 847600 chr14 62352554 62354325 + 1141.96 NA Intergenic L1PA4|LINE|L1 -213466 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 211087 chr2_KI270772v1_alt 5513 5863 + 1141.96 NA NA Intergenic NA NA 2005198 chr8 144974503 144979906 + 1141.96 NA non-coding (NR_023392, exon 5 of 5) non-coding (NR_023392, exon 5 of 5) -17661 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 230413-3 chr14_GL000225v1_random 55826 56376 + 1141.96 NA NA BSR/Beta|Satellite|Satellite NA NA 379220 chr17 62182092 62183089 + 1141.96 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 93065 NR_027486 440452 Hs.448884 NR_027486 ENSG00000188755 TBC1D3P2 - TBC1 domain family member 3 pseudogene 2 pseudo 355414-3 chr7 6683761 6684975 + 1054.12 NA Intergenic (GTTAATGG)n|Simple_repeat|Simple_repeat 22579 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 274423 chr10 41857880 41858672 + 1054.12 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 509769 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 520824 chr4 38299286 38300885 + 1054.12 NA Intergenic L1M1|LINE|L1 -66829 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA 362793 chr14_GL000225v1_random 116149 117201 + 1054.12 NA NA BSR/Beta|Satellite|Satellite NA NA 264672 chr3 105972373 105973124 + 1054.12 NA Intergenic Intergenic -103347 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 372104 chr21 31243241 31244186 + 1054.12 NA intron (NM_001353686, intron 6 of 27) L1M4a1|LINE|L1 -82773 NM_001353685 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding 1286376 chr14 66942615 66946264 + 1054.12 NA intron (NM_020806, intron 8 of 22) MER61-int|LTR|ERV1 -245001 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 438778 chr8 124948089 124949180 + 1054.12 NA intron (NR_027321, intron 3 of 3) Tigger5b|DNA|TcMar-Tigger 6626 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA 288478 chr19 27663847 27664604 + 1054.12 NA Intergenic ALR/Alpha|Satellite|centr -129206 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 600761 chr18 2387028 2388409 + 1054.12 NA Intergenic L1ME1|LINE|L1 183787 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 187370-9 chr7 71050615 71050992 + 1054.12 NA Intergenic L1MA8|LINE|L1 -81341 NM_022479 64409 Hs.488591 NM_022479 ENSG00000185274 GALNT17 GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T17|GalNAc-T19|GalNAc-T5L|WBSCR17 polypeptide N-acetylgalactosaminyltransferase 17 protein-coding 718120 chr10 42539951 42542235 + 1054.12 NA intron (NR_026777, intron 5 of 7) L1M4c|LINE|L1 11777 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo 721370 chr16 35444381 35446409 + 1054.12 NA Intergenic Intergenic 35201 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 1135639 chr14 62430879 62433917 + 1054.12 NA Intergenic Intergenic -292425 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 284788-3 chr20 746067 746571 + 1054.12 NA Intergenic L1M4b|LINE|L1 22181 NM_033409 113278 Hs.283865 NM_033409 ENSG00000101276 SLC52A3 BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2 solute carrier family 52 member 3 protein-coding 983934 chr7 6680573 6683456 + 1054.12 NA Intergenic Intergenic 24933 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 573354 chr4 49096050 49097925 + 1054.12 NA Intergenic (CATTC)n|Satellite|Satellite 110345 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 702044 chr14 66439013 66440861 + 1054.12 NA Intergenic L1MEc|LINE|L1 -46434 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 271260-2 chr15 70334260 70334901 + 1054.12 NA Intergenic L1ME2|LINE|L1 171348 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA 645297 chr10 43481976 43483489 + 1054.12 NA 3' UTR (NM_001355445, exon 4 of 4) 3' UTR (NM_001355445, exon 4 of 4) 45621 NM_001355450 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding 1.54964e+06 chr4_GL000008v2_random 9 4315 + 1054.12 NA Intergenic Intergenic 176009 NR_046228 100874392 Hs.648245 NR_046228 ANKRD20A12P - ankyrin repeat domain 20 family member A12, pseudogene pseudo 357522 chr14 66437906 66438866 + 1054.12 NA Intergenic L1MEc|LINE|L1 -47985 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 620701 chr10 75572134 75574227 + 1054.12 NA intron (NM_001305581, intron 2 of 6) L1MEd|LINE|L1 20722 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA 615870 chr4 49118720 49119992 + 1054.12 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 132714 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 341184-2 chr17 47770991 47771727 + 1054.12 NA Intergenic L1MEh|LINE|L1 38123 NM_013351 30009 Hs.272409 NM_013351 ENSG00000073861 TBX21 T-PET|T-bet|TBET|TBLYM T-box transcription factor 21 protein-coding 566150 chr2 229737600 229739318 + 1054.12 NA Intergenic L1M4|LINE|L1 -23904 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding 237880 chr4 49147291 49147822 + 1054.12 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 160914 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 327304-2 chr16 46388560 46389381 + 1054.12 NA Intergenic Intergenic 180127 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 364374 chrUn_KI270544v1 13 643 + 1054.12 NA NA ALR/Alpha|Satellite|centr NA NA 565360 chr12 34412502 34414094 + 1054.12 NA Intergenic ALR/Alpha|Satellite|centr 390802 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 620350 chr8 124975191 124976528 + 1054.12 NA intron (NM_152412, intron 2 of 2) MIRb|SINE|MIR 2564 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding 425777 chr10 83749028 83750778 + 1054.12 NA Intergenic L1M2b|LINE|L1 -72814 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 559387 chr2 135511887 135514031 + 966.277 NA intron (NM_032143, intron 1 of 20) L1M4|LINE|L1 17626 NM_001286568 84083 Hs.658422 NM_032143 ENSG00000121988 ZRANB3 4933425L19Rik|AH2 zinc finger RANBP2-type containing 3 protein-coding 467854 chr19 27565887 27567039 + 966.277 NA Intergenic ALR/Alpha|Satellite|centr -226968 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 400741 chr19 24375867 24376957 + 966.277 NA Intergenic ALR/Alpha|Satellite|centr -212965 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 543750 chr2 42413790 42415250 + 966.277 NA Intergenic L1MEi|LINE|L1 -45563 NM_001319036 9167 Hs.339639 NM_004718 ENSG00000115944 COX7A2L COX7AR|COX7RP|EB1|SIG81 cytochrome c oxidase subunit 7A2 like protein-coding 241218-5 chr7 22645147 22645871 + 966.277 NA Intergenic L1MA9|LINE|L1 20024 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA 341799 chr9 98526880 98527802 + 966.277 NA intron (NM_005458, intron 3 of 18) MIR|SINE|MIR 181594 NM_005458 9568 Hs.198612 NM_005458 ENSG00000136928 GABBR2 EIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS gamma-aminobutyric acid type B receptor subunit 2 protein-coding 234278-2 chr8 128432452 128433098 + 966.277 NA intron (NR_121672, intron 2 of 7) L1PA16|LINE|L1 131904 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA 640905 chr2 112203739 112205644 + 966.277 NA Intergenic L1M4|LINE|L1 50351 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding 245610 chr8 118570859 118571405 + 966.277 NA intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -49869 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 184822-4 chr20 31063032 31063381 + 966.277 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -194458 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 351813 chr7 46964456 46965354 + 966.277 NA Intergenic L1MB5|LINE|L1 -267783 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 266253 chr7 6668637 6669370 + 966.277 NA Intergenic L1MD|LINE|L1 31685 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding 293221 chr16 81971245 81972041 + 966.277 NA Intergenic L1MB1|LINE|L1 39827 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding 670157 chr4 68207770 68209765 + 966.277 NA intron (NR_104048, intron 2 of 9) intron (NR_104048, intron 2 of 9) 9313 NR_104048 401136 Hs.652046 NM_001129907 ENSG00000250026 TMPRSS11BNL - TMPRSS11B N-terminal like, pseudogene pseudo 494382 chr8 120787345 120788757 + 966.277 NA intron (NM_021021, intron 1 of 6) L1PB3|LINE|L1 23995 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 269504 chr10 49266021 49266925 + 966.277 NA Intergenic L1MDa|LINE|L1 32420 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA 192289-2 chr11 70793480 70793891 + 966.277 NA intron (NM_012309, intron 13 of 24) L1ME2|LINE|L1 -69105 NR_073536 220070 Hs.326766 NM_145308 ENSG00000171671 SHANK2-AS3 C11orf76 SHANK2 antisense RNA 3 ncRNA 655399 chr8 110001648 110003664 + 966.277 NA Intergenic L1MA2|LINE|L1 -26885 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 210385-4 chr4 154054586 154054991 + 966.277 NA Intergenic L1MA5A|LINE|L1 -265705 NM_003013 6423 Hs.481022 NM_003013 ENSG00000145423 SFRP2 FRP-2|SARP1|SDF-5 secreted frizzled related protein 2 protein-coding 440007 chr2 130954424 130955440 + 966.277 NA intron (NM_001367493, intron 4 of 13) L1M4b|LINE|L1 118018 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding 356644 chr11 50598837 50599508 + 966.277 NA Intergenic ALR/Alpha|Satellite|centr 190025 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 427534 chr10 34062122 34063258 + 966.277 NA Intergenic L1MEg|LINE|L1 -290010 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 487882 chr14 62333075 62334680 + 966.277 NA Intergenic L1MEc|LINE|L1 -193904 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 332224 chr1 147444584 147445599 + 966.277 NA intron (NR_038423, intron 3 of 3) L1MB4|LINE|L1 72784 NR_038423 100289211 Hs.323484 NR_038423 ENSG00000278811 LINC00624 - long intergenic non-protein coding RNA 624 ncRNA 303762 chr5 79551737 79552550 + 966.277 NA Intergenic Intergenic -38009 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding 732614 chr2 79180956 79183123 + 966.277 NA Intergenic (T)n|Simple_repeat|Simple_repeat -22286 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 876677 chr10 37894083 37896741 + 966.277 NA Intergenic Intergenic -37309 NM_001352477 57209 Hs.528423 NM_021045 ENSG00000198105 ZNF248 bA162G10.3 zinc finger protein 248 protein-coding 205202-2 chr10 90136185 90136672 + 966.277 NA Intergenic HUERS-P3b-int|LTR|ERV1 -179055 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA 982967 chr17 61617955 61620410 + 966.277 NA Intergenic Intergenic -27963 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 636864 chr18 13595731 13597565 + 966.277 NA intron (NM_181482, intron 4 of 5) L1M4b|LINE|L1 -14466 NR_039752 100616130 NR_039752 ENSG00000263527 MIR4526 mir-4526 microRNA 4526 ncRNA 460211 chr1 112072597 112073849 + 966.277 NA Intergenic L1ME3A|LINE|L1 82687 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 956175 chr10 41911574 41914295 + 966.277 NA Intergenic (AATGG)n|Simple_repeat|Simple_repeat 455111 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 749392 chr8 142050596 142052508 + 966.277 NA Intergenic L1MD1|LINE|L1 -124787 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA 395998 chr4 79081705 79082716 + 966.277 NA intron (NR_038342, intron 2 of 5) L2c|LINE|L2 110462 NR_038342 100505875 Hs.480055 NR_038342 LINC01088 - long intergenic non-protein coding RNA 1088 ncRNA 800692 chr19 27609369 27611847 + 966.277 NA Intergenic ALR/Alpha|Satellite|centr -182823 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 731911 chr8 129098576 129100738 + 966.277 NA Intergenic L1MEg|LINE|L1 -133656 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA 177707-7 chr7 4371038 4371383 + 966.277 NA Intergenic LTR33C|LTR|ERVL -236373 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 415587 chr19 44478174 44479293 + 966.277 NA intron (NM_001288761, intron 3 of 3) intron (NM_001288761, intron 3 of 3) 21789 NM_001278508 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding 336177 chr5 45959699 45960479 + 966.277 NA Intergenic ALR/Alpha|Satellite|centr -263709 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 213635-5 chr4 98194258 98194933 + 966.277 NA Intergenic MER4B-int|LTR|ERV1 -51119 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding 218642-2 chr12 115849647 115850179 + 966.277 NA Intergenic MLT1D|LTR|ERVL-MaLR 298741 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA 451076 chr22 34265944 34267632 + 966.277 NA Intergenic L1ME3A|LINE|L1 -343900 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 192904-4 chr9 81190480 81190841 + 966.277 NA Intergenic Intergenic 498875 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding 215128-3 chr12 53137211 53137780 + 966.277 NA Intergenic L1MB8|LINE|L1 26998 NM_001244706 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding 263530 chr1 113172223 113172898 + 966.277 NA Intergenic L1MA4A|LINE|L1 33693 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA 486125 chr4 45048647 45050727 + 966.277 NA Intergenic L1M5|LINE|L1 -323053 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding 401268 chr8 122322458 122323525 + 966.277 NA Intergenic Intergenic 245653 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 323351 chr1 118363486 118364441 + 966.277 NA Intergenic Intergenic -178735 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 369381 chr10 59977149 59978077 + 966.277 NA Intergenic L1MC4|LINE|L1 -16700 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA 421033 chr1 34115271 34116489 + 966.277 NA intron (NM_052896, intron 1 of 69) L1MB2|LINE|L1 49394 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding 618066 chr2 44874735 44876643 + 878.434 NA Intergenic Intergenic 63199 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA 481206 chr7 35324764 35326529 + 878.434 NA intron (NR_038864, intron 1 of 2) L1M6|LINE|L1 11791 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA 349617 chr14 52498162 52499472 + 878.434 NA intron (NM_001160047, intron 9 of 20) L1M3|LINE|L1 53688 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding 184822-7 chr5 97943434 97943878 + 878.434 NA Intergenic Intergenic 102898 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA 193255-3 chr7 7068924 7069388 + 878.434 NA Intergenic SATR1|Satellite|Satellite -2111 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA 404431 chr20 31074092 31075151 + 878.434 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -183043 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 515641-2 chr8 129790327 129792221 + 878.434 NA Intergenic L1MA3|LINE|L1 -4650 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 591889 chr2 125073011 125075386 + 878.434 NA Intergenic Intergenic 1043787 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 252110-2 chr5 175141661 175142482 + 878.434 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -146340 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA 224264-3 chr3 182101263 182101833 + 878.434 NA Intergenic Tigger1|DNA|TcMar-Tigger 149184 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA 203182-3 chr5 13934295 13934992 + 878.434 NA intron (NM_001369, intron 1 of 78) intron (NM_001369, intron 1 of 78) 9837 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 216358-3 chr11 69550662 69551220 + 878.434 NA Intergenic L1M5|LINE|L1 65380 NR_120542 101928292 Hs.736219 NR_120542 LINC01488 BRCAT8 long intergenic non-protein coding RNA 1488 ncRNA 964959 chr9 31953678 31957563 + 878.434 NA Intergenic L1MA9|LINE|L1 -428983 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding 301830 chr19 51970297 51971415 + 878.434 NA intron (NM_021632, intron 2 of 4) L1ME3B|LINE|L1 15984 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding 494734 chr4 83701231 83702589 + 878.434 NA Intergenic L2c|LINE|L2 165802 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding 288653 chr15 60050768 60051440 + 878.434 NA Intergenic HAL1|LINE|L1 46793 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding 406188 chr19 24333645 24335013 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr -170882 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 379571-2 chr9 93761797 93762506 + 878.434 NA Intergenic Intergenic -57206 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA 557717 chr8 126075049 126076929 + 878.434 NA Intergenic Intergenic -124792 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 257645-2 chr14_GL000225v1_random 110993 111831 + 878.434 NA NA BSR/Beta|Satellite|Satellite NA NA 425777-2 chr10 111038667 111040390 + 878.434 NA Intergenic L1M1|LINE|L1 -37501 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding 813430 chr18 13958277 13960337 + 878.434 NA Intergenic A-rich|Low_complexity|Low_complexity -43600 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding 239988-2 chr10 53668556 53669125 + 878.434 NA Intergenic L1PA16|LINE|L1 -817390 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 314128 chr3 44719154 44719998 + 878.434 NA intron (NM_001282880, intron 3 of 4) L1MC4a|LINE|L1 6916 NM_001134442 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 454765 chr8 141746749 141748193 + 878.434 NA Intergenic AluSz|SINE|Alu 38842 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 213635-3 chr2 189941314 189942178 + 878.434 NA Intergenic L1M3f|LINE|L1 120983 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding 1473040 chr19 29342794 29347431 + 878.434 NA intron (NR_040029, intron 9 of 9) L1MB3|LINE|L1 -131961 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 206783-6 chr2 13071459 13072025 + 878.434 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -64729 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 681313 chr10 76606676 76608595 + 878.434 NA Intergenic L1MEf|LINE|L1 -280409 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 191235-4 chr5 178884033 178884632 + 878.434 NA 3' UTR (NM_058230, exon 5 of 5) 3' UTR (NM_058230, exon 5 of 5) -11581 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding 464691-2 chr7 39547400 39549090 + 878.434 NA Intergenic Intergenic -18159 NM_020192 57002 Hs.72168 NM_020192 ENSG00000241127 YAE1 C7orf36|CIAB2|GK003|YAE1D1 YAE1 maturation factor of ABCE1 protein-coding 603484 chr5 33169862 33171402 + 878.434 NA Intergenic L1ME2z|LINE|L1 -59103 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA 204675-2 chr11 115588458 115588944 + 878.434 NA Intergenic Intergenic -84286 NM_001098517 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding 262476-3 chr8 139571256 139572244 + 878.434 NA Intergenic Intergenic 131373 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 204412 chr11 90481111 90481683 + 878.434 NA intron (NR_104190, intron 1 of 6) intron (NR_104190, intron 1 of 6) 74460 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA 556927 chr5 126166066 126167331 + 878.434 NA Intergenic L1M2|LINE|L1 -12879 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA 222771-2 chr4 89347659 89348032 + 878.434 NA Intergenic L1M3f|LINE|L1 -40045 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding 260016 chr8 79231202 79232125 + 878.434 NA Intergenic Charlie15b|DNA|hAT-Charlie -100525 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 393890 chr4 71862133 71863156 + 878.434 NA Intergenic MER4B-int|LTR|ERV1 -57124 NM_001204306 2638 Hs.418497 NM_000583 ENSG00000145321 GC DBP|DBP-maf|DBP/GC|GRD3|Gc-MAF|GcMAF|HEL-S-51|VDB|VDBG|VDBP GC vitamin D binding protein protein-coding 315709 chr12 38023517 38024537 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr -292747 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 724971 chr8 144562850 144564611 + 878.434 NA intron (NM_025251, intron 2 of 10) AluJr|SINE|Alu -34619 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding 251144-3 chr5 175109416 175110145 + 878.434 NA Intergenic MER21C|LTR|ERVL -114049 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA 252198 chr10 80369220 80369896 + 878.434 NA Intergenic L1PA12|LINE|L1 12777 NM_032372 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding 394856 chr17 62941520 62942489 + 878.434 NA Intergenic Intergenic -2211 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA 255624-2 chr8 79118810 79119430 + 878.434 NA Intergenic L2c|LINE|L2 -213068 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 239725 chr10 12892544 12893270 + 878.434 NA Intergenic L1MB7|LINE|L1 108806 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding 229798-2 chr3 130878287 130879048 + 878.434 NA intron (NM_001199181, intron 1 of 26) L1MA5|LINE|L1 -15348 NM_001001485 27032 Hs.584884 NM_014382 ENSG00000017260 ATP2C1 ATP2C1A|BCPM|HHD|PMR1|SPCA1|hSPCA1 ATPase secretory pathway Ca2+ transporting 1 protein-coding 301303-2 chr6 149001583 149002424 + 878.434 NA intron (NM_005715, intron 5 of 7) intron (NM_005715, intron 5 of 7) 30658 NR_134599 105378047 Hs.659484 NR_134599 LOC105378047 - uncharacterized LOC105378047 ncRNA 267483-2 chr8 135112662 135113280 + 878.434 NA Intergenic MSTB-int|LTR|ERVL-MaLR -121160 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 267132-2 chr7 64708519 64709223 + 878.434 NA 3' UTR (NM_001282359, exon 4 of 4) 3' UTR (NM_001282359, exon 4 of 4) 29807 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 202215 chr18 9976100 9976602 + 878.434 NA Intergenic L1MEg|LINE|L1 62335 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding 352076 chrUn_GL000216v2 159387 160044 + 878.434 NA NA BSR/Beta|Satellite|Satellite NA NA 574496 chr12 34589496 34591075 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 567789 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 443345 chr2 89839496 89841447 + 878.434 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -202564 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 326602 chr1 152091896 152093164 + 878.434 NA Intergenic Intergenic -3466 NM_001008536 126637 Hs.546477 NM_001008536 ENSG00000182898 TCHHL1 S100A17|THHL1 trichohyalin like 1 protein-coding 443521 chr8 120665429 120666483 + 878.434 NA intron (NM_021021, intron 2 of 6) L1ME1|LINE|L1 -95297 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA 276795 chr17 26603397 26604000 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 485543 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 254043-2 chr7 62661986 62662585 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 641771 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 330818 chr7 50230721 50231565 + 878.434 NA Intergenic Intergenic -72921 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 227514-2 chr16 78922371 78922993 + 878.434 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 678055 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 244644-3 chr8 84579656 84580285 + 878.434 NA intron (NM_001354308, intron 3 of 9) MER33|DNA|hAT-Charlie -125957 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 348299 chr7 34695835 34696820 + 878.434 NA intron (NM_001300934, intron 2 of 6) L1PB4|LINE|L1 38088 NM_001300935 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 360948 chr12 1904387 1905043 + 878.434 NA intron (NM_172364, intron 6 of 37).2 L1M4c|LINE|L1 13937 NM_172364 93589 Hs.13768 NM_172364 ENSG00000151062 CACNA2D4 RCD4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 protein-coding 225845-2 chr19 36716133 36716676 + 878.434 NA intron (NM_152603, intron 4 of 4) intron (NM_152603, intron 4 of 4) 12723 NM_001363651 163081 Hs.412517 NM_152603 ENSG00000189042 ZNF567 - zinc finger protein 567 protein-coding 394241 chr8 126263667 126264793 + 878.434 NA Intergenic L1MEh|LINE|L1 -61265 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 222419 chr20 62076852 62077391 + 878.434 NA Intergenic L1MA7|LINE|L1 -11311 NM_003185 6874 Hs.18857 NM_003185 ENSG00000130699 TAF4 TAF2C|TAF2C1|TAF4A|TAFII130|TAFII135 TATA-box binding protein associated factor 4 protein-coding 459772 chr10 41859240 41860601 + 878.434 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 508125 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 606558 chr2 24528942 24531517 + 878.434 NA intron (NM_001362952, intron 1 of 23) intron (NM_001362952, intron 1 of 23) 38352 NM_001362955 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 530047 chr10 41742874 41744046 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 624585 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 259050-3 chr8 139577888 139578871 + 878.434 NA Intergenic L1MC3|LINE|L1 124744 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 380889 chr16 81345872 81347470 + 878.434 NA intron (NM_022041, intron 1 of 10) MER1B|DNA|hAT-Charlie 31705 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding 201161-2 chr2 4129991 4130569 + 878.434 NA Intergenic Intergenic 156119 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA 239373 chr5 35846724 35847303 + 878.434 NA Intergenic THE1C|LTR|ERVL-MaLR -9878 NR_120485 3575 Hs.591742 NM_002185 ENSG00000168685 IL7R CD127|CDW127|IL-7R-alpha|IL7RA|ILRA interleukin 7 receptor protein-coding 648548 chr8 141912354 141914334 + 878.434 NA Intergenic L1MEc|LINE|L1 -127031 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 205905-2 chr5 26268818 26269287 + 878.434 NA Intergenic L1ME3|LINE|L1 769534 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 249914 chr11 111484252 111485046 + 878.434 NA intron (NM_017589, intron 5 of 5) L1MA2|LINE|L1 -25953 NR_147706 728196 Hs.363156 NR_147706 ENSG00000286028 LOC728196 - uncharacterized LOC728196 ncRNA 493504 chr14 77169712 77171030 + 878.434 NA Intergenic L1MB7|LINE|L1 -11427 NM_020431 57156 Hs.22452 NM_020431 ENSG00000165548 TMEM63C C14orf171|CSC1|hsCSC1 transmembrane protein 63C protein-coding 366043 chr4 30332039 30333501 + 878.434 NA Intergenic Intergenic -387599 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 574935 chr5 151930348 151932464 + 878.434 NA Intergenic L1MEg|LINE|L1 -6555 NM_000171 2741 Hs.121490 NM_000171 ENSG00000145888 GLRA1 HKPX1|STHE glycine receptor alpha 1 protein-coding 268889 chr12 39149641 39150194 + 878.434 NA Intergenic L1MA2|LINE|L1 -244326 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding 915767 chr19 52471751 52474986 + 878.434 NA intron (NM_001366182, intron 3 of 5) intron (NM_001366182, intron 3 of 5) 19815 NM_001366182 147660 Hs.157287 NM_152472 ENSG00000258405 ZNF578 - zinc finger protein 578 protein-coding 334420-3 chr14 63924080 63924968 + 878.434 NA intron (NM_015180, intron 2 of 114) L1M4|LINE|L1 71520 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding 917348 chr15 60274535 60277460 + 878.434 NA Intergenic L1MEg|LINE|L1 121989 NM_001002858 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 247191-3 chr5 116868090 116868672 + 878.434 NA Intergenic L1MA5A|LINE|L1 -106172 NR_104678 102467223 Hs.570916 NR_104678 LINC02214 - long intergenic non-protein coding RNA 2214 ncRNA 257732-4 chr5 43920844 43921590 + 878.434 NA Intergenic L1M1|LINE|L1 -317987 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA 273896-3 chr8 117140909 117141611 + 878.434 NA intron (NM_173851, intron 1 of 7) L1M4b|LINE|L1 6265 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 532594 chr11 29372831 29375000 + 878.434 NA Intergenic L1M4b|LINE|L1 -220498 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA 204499 chr10 71110894 71111561 + 878.434 NA Intergenic L1M3f|LINE|L1 -101343 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding 236826 chr12 133072699 133073268 + 878.434 NA Intergenic Intergenic -7220 NM_003440 7699 Hs.181552 NM_003440 ENSG00000196387 ZNF140 pHZ-39 zinc finger protein 140 protein-coding 194485-6 chr7 396213 396733 + 878.434 NA Intergenic L1M4b|LINE|L1 17048 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA 337494-2 chr4 64677150 64678197 + 878.434 NA Intergenic HERVL-int|LTR|ERVL -268213 NM_001363796 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 302796-3 chr5 111301061 111301947 + 878.434 NA intron (NM_001744, intron 1 of 10) intron (NM_001744, intron 1 of 10) 77120 NM_001323377 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding 194134-7 chr8 56951789 56952173 + 878.434 NA Intergenic THE1B|LTR|ERVL-MaLR 41886 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding 289795-2 chr6 62650332 62651020 + 878.434 NA Intergenic MER61-int|LTR|ERV1 -364449 NM_001350622 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 210648-2 chr12 128876727 128877422 + 878.434 NA intron (NM_144669, intron 2 of 7) LTR37B|LTR|ERV1 23596 NM_144669 144423 Hs.655668 NM_144669 ENSG00000151948 GLT1D1 - glycosyltransferase 1 domain containing 1 protein-coding 431838 chr5 44990703 44991903 + 878.434 NA Intergenic Intergenic 182356 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 377902 chr2 83417730 83418726 + 878.434 NA Intergenic L1PB4|LINE|L1 -104586 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA 601551 chr7 28971241 28973060 + 878.434 NA Intergenic Intergenic -7817 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA 325284-2 chr8 134147377 134148598 + 878.434 NA Intergenic Intergenic 261491 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 445542 chr11 54971702 54973601 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 265819 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 586970 chr14 54091008 54092997 + 878.434 NA Intergenic L2c|LINE|L2 -135111 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding 727168 chr10 72977853 72980328 + 878.434 NA Intergenic L1MA5A|LINE|L1 -24284 NM_032562 84647 Hs.333175 NM_032562 ENSG00000138308 PLA2G12B FKSG71|GXIIB|GXIIIsPLA2|PLA2G13|sPLA2-GXIIB phospholipase A2 group XIIB protein-coding 202391-7 chr5 162648673 162649137 + 878.434 NA Intergenic Intergenic 581263 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 393099 chr7 53669721 53670827 + 878.434 NA intron (NR_038371, intron 5 of 5) L1MB4|LINE|L1 141657 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 1000536 chr19 37801767 37805995 + 878.434 NA Intergenic Intergenic -13530 NR_040013 644554 Hs.683930 NR_040013 LOC644554 - uncharacterized LOC644554 ncRNA 746844 chr16 73448816 73450830 + 878.434 NA Intergenic HAL1b|LINE|L1 63018 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 222595-4 chr9 71860065 71860722 + 878.434 NA Intergenic L1M4b|LINE|L1 50852 NM_001025780 51104 Hs.380389 NM_016014 ENSG00000107362 ABHD17B C9orf77|CGI-67|FAM108B1 abhydrolase domain containing 17B protein-coding 519330-2 chr6 53209452 53211244 + 878.434 NA Intergenic Intergenic -61507 NM_003643 8521 Hs.23589 NM_003643 ENSG00000137270 GCM1 GCMA|hGCMa glial cells missing transcription factor 1 protein-coding 274686 chr9 82575429 82576228 + 878.434 NA Intergenic L1MB4|LINE|L1 487314 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 206520-3 chr16 82210611 82211197 + 878.434 NA Intergenic MLT1K|LTR|ERVL-MaLR -40680 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 536460 chr5 132141980 132143819 + 878.434 NA Intergenic L1MC4|LINE|L1 -41977 NR_047470 100861518 Hs.519568 NR_047470 ENSG00000237714 P4HA2-AS1 - P4HA2 antisense RNA 1 ncRNA 383085 chr8 100587701 100589023 + 878.434 NA intron (NM_152628, intron 11 of 13) intron (NM_152628, intron 11 of 13) -28603 NM_001270379 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 271436-2 chr3 181165646 181166321 + 878.434 NA intron (NR_075091, intron 2 of 7) L1MB1|LINE|L1 -9161 NR_075093 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA 294627-2 chr8 139926805 139927622 + 878.434 NA intron (NM_001160372, intron 19 of 22) L1ME1|LINE|L1 173322 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 542784 chr8 142311372 142313111 + 878.434 NA intron (NM_001366903, intron 9 of 9) Tigger4a|DNA|TcMar-Tigger 90941 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 191762-2 chr12 110805482 110806006 + 878.434 NA Intergenic MER113|DNA|hAT-Charlie -41243 NM_001286243 160762 Hs.437141 NM_152591 ENSG00000173093 CCDC63 ODA5 coiled-coil domain containing 63 protein-coding 572475 chr5 140763390 140765079 + 878.434 NA Intergenic Intergenic -21902 NM_031410 56147 Hs.199343 NM_018900 ENSG00000204970 PCDHA1 PCDH-ALPHA1 protocadherin alpha 1 protein-coding 310790 chr10 39303824 39304932 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 607782 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 295066-2 chr8 139751205 139752147 + 878.434 NA intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -48553 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 215128-6 chr20 42142218 42142741 + 878.434 NA intron (NM_133170, intron 18 of 31) L2a|LINE|L2 -524102 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 453008 chr8 143415012 143416619 + 878.434 NA Intergenic AluY|SINE|Alu -1864 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA 270382 chr14_GL000225v1_random 50479 51277 + 878.434 NA NA BSR/Beta|Satellite|Satellite NA NA 531979 chr14 63166834 63168228 + 878.434 NA Intergenic L1MA7|LINE|L1 -36912 NM_020663 57381 Hs.656339 NM_020663 ENSG00000126785 RHOJ ARHJ|RASL7B|TC10B|TCL ras homolog family member J protein-coding 223649-3 chr6 60230119 60230549 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr -1343796 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 356995 chr15 56602443 56603376 + 878.434 NA Intergenic Cheshire|DNA|hAT-Charlie 131177 NM_001288588 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding 239900-2 chr4 51107155 51107584 + 878.434 NA Intergenic SAR|Satellite|Satellite -735631 NM_015115 23142 Hs.605388 NM_015115 ENSG00000109184 DCUN1D4 - defective in cullin neddylation 1 domain containing 4 protein-coding 511600 chr10 29165918 29167358 + 878.434 NA Intergenic L1MEc|LINE|L1 -122432 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding 287511 chr11 10080532 10081206 + 878.434 NA intron (NM_030962, intron 2 of 39) L1M2|LINE|L1 213338 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding 209243-4 chr15 46016012 46016602 + 878.434 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 311112 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA 611917 chr11 50455105 50456662 + 878.434 NA Intergenic ALR/Alpha|Satellite|centr 46736 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 245698-5 chr9 96762390 96763147 + 878.434 NA intron (NM_001314060, intron 4 of 4) L1ME3B|LINE|L1 15319 NM_001314060 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding 307628-2 chr2 73309551 73310626 + 878.434 NA Intergenic L1MA9|LINE|L1 -16540 NM_001965 1961 Hs.3052 NM_001965 ENSG00000135625 EGR4 AT133|NGFI-C|NGFIC|PAT133 early growth response 4 protein-coding 300336 chr2 180335717 180336373 + 878.434 NA Intergenic (CAATAC)n|Simple_repeat|Simple_repeat -328748 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding 343028 chr15 68856755 68857515 + 878.434 NA Intergenic L1MDa|LINE|L1 -36240 NM_006305 8125 Hs.458747 NM_006305 ENSG00000140350 ANP32A C15orf1|HPPCn|I1PP2A|LANP|MAPM|PHAP1|PHAPI|PP32 acidic nuclear phosphoprotein 32 family member A protein-coding 1464084 chr2 95211871 95216700 + 878.434 NA Intergenic Intergenic 48476 NM_001017396 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding 201952-4 chr2 96517016 96517345 + 878.434 NA Intergenic L1MEd|LINE|L1 -9071 NR_104346 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding 1519514 chr1 227655556 227660608 + 878.434 NA 3' UTR (NM_001367910, exon 5 of 5) 3' UTR (NM_001367910, exon 5 of 5) 39625 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 206520-2 chr14 67926906 67927311 + 878.434 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 103516 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 281626-4 chr7 7281816 7282692 + 878.434 NA Intergenic MLT1A0|LTR|ERVL-MaLR 27100 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA 500619 chr14 68150086 68151295 + 878.434 NA intron (NM_133509, intron 7 of 10) L1MEc|LINE|L1 327098 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 563427 chr7 18261170 18263308 + 878.434 NA intron (NM_001321872, intron 2 of 11) L1M4|LINE|L1 -27853 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 221892 chr1 227696292 227696868 + 878.434 NA TTS (NR_036753) TTS (NR_036753) 1127 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 279430 chr20 31057750 31058437 + 878.434 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -199571 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 646791 chr22 19647989 19649880 + 790.59 NA Intergenic L1M4|LINE|L1 -65569 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding 307803 chr2 120649902 120650789 + 790.59 NA Intergenic L1MEg|LINE|L1 -85523 NM_001371271 315094 chr6 68459609 68460814 + 790.59 NA Intergenic L1MEc|LINE|L1 -130312 NR_125854 101928280 Hs.544560 NR_125854 ENSG00000226497 LINC02549 - long intergenic non-protein coding RNA 2549 ncRNA 331257 chr8 86238781 86239872 + 790.59 NA Intergenic L1MC2|LINE|L1 -8945 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 199317-3 chr18 13342602 13343090 + 790.59 NA intron (NM_181482, intron 2 of 5) L1MB2|LINE|L1 64741 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 507998 chr14 76681180 76683120 + 790.59 NA Intergenic L1ME3F|LINE|L1 -79318 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 571948 chr11 15267350 15269370 + 790.59 NA Intergenic Intergenic 119258 NM_001278316 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding 506856 chr8 134672307 134673946 + 790.59 NA intron (NM_020863, intron 1 of 15) intron (NM_020863, intron 1 of 15) 23429 NM_001174158 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding 362266-2 chr5 150935757 150936812 + 790.59 NA intron (NR_026867, intron 4 of 4) L1MB8|LINE|L1 10300 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 228569-3 chr7 30113279 30114255 + 790.59 NA intron (NM_001350973, intron 13 of 13) L1MB7|LINE|L1 -21219 NM_152793 222166 Hs.200100 NM_152793 ENSG00000180354 MTURN C7orf41|Ells1 maturin, neural progenitor differentiation regulator homolog protein-coding 546122 chr1 41337657 41339557 + 790.59 NA Intergenic L1MEc|LINE|L1 -22827 NM_001291281 100132074 Hs.559677 NM_001291281 FOXO6 - forkhead box O6 protein-coding 191235-5 chr8 91586235 91586703 + 790.59 NA Intergenic L1M3c|LINE|L1 337150 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding 197121-2 chr2 40001960 40002504 + 790.59 NA intron (NR_038441, intron 2 of 4) intron (NR_038441, intron 2 of 4) 84598 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA 240603-2 chr20 43419320 43420112 + 790.59 NA Intergenic L1M2c|LINE|L1 -38180 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding 364199 chr22 26937488 26938376 + 790.59 NA Intergenic L1ME1|LINE|L1 34640 NR_110540 101929539 Hs.517505 NR_110540 ENSG00000235271 LINC01422 - long intergenic non-protein coding RNA 1422 ncRNA 241569-3 chr8 91908568 91909206 + 790.59 NA Intergenic Intergenic 108793 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 252462 chr11 50401865 50402680 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -6875 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 178849-6 chr2 117096567 117096987 + 790.59 NA Intergenic Intergenic -717914 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 327304 chr1 45257884 45258982 + 790.59 NA Intergenic MSTA-int|LTR|ERVL-MaLR -45477 NR_024270 400752 Hs.334348 NR_024270 ENSG00000281912 LINC01144 - long intergenic non-protein coding RNA 1144 ncRNA 990610 chr8 126275196 126278097 + 790.59 NA Intergenic L1MEg|LINE|L1 -48849 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 235596-3 chr3 94852737 94853608 + 790.59 NA Intergenic MLT1A|LTR|ERVL-MaLR -85091 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA 561407 chr10 64224320 64226404 + 790.59 NA Intergenic L1MA5|LINE|L1 -600166 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 233049 chr2 107644967 107645471 + 790.59 NA Intergenic L1MB1|LINE|L1 -108893 NR_126369 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA 199317-6 chr7 34692130 34692805 + 790.59 NA intron (NM_001300934, intron 2 of 6) L1PB4|LINE|L1 34228 NM_001300935 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 208013 chr17 16621721 16622375 + 790.59 NA 3' UTR (NM_020787, exon 6 of 6) 3' UTR (NM_020787, exon 6 of 6) 31802 NM_020787 57547 Hs.128078 NM_020787 ENSG00000197566 ZNF624 - zinc finger protein 624 protein-coding 244995 chr5 19027767 19028480 + 790.59 NA Intergenic L1MEg|LINE|L1 858149 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 330730 chr2 239707812 239708844 + 790.59 NA Intergenic Intergenic -54532 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA 576604 chr17 60915437 60917267 + 790.59 NA intron (NM_001330413, intron 12 of 25) L1MDa|LINE|L1 238501 NM_001320470 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 349441 chr5 35535769 35536933 + 790.59 NA Intergenic L1M6|LINE|L1 -81512 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding 255976-2 chr6 45681189 45682107 + 790.59 NA Intergenic Intergenic 255949 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding 248948-3 chr5 172370880 172371845 + 790.59 NA intron (NM_001017995, intron 6 of 12) intron (NM_001017995, intron 6 of 12) 83161 NM_001308175 285590 Hs.285666 NM_001017995 ENSG00000174705 SH3PXD2B FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4 SH3 and PX domains 2B protein-coding 281450-2 chr14 60701805 60702348 + 790.59 NA Intergenic L1MA5A|LINE|L1 22275 NM_017420 51804 Hs.97849 NM_017420 ENSG00000100625 SIX4 AREC3 SIX homeobox 4 protein-coding 541379 chr1 40102419 40104908 + 790.59 NA Intergenic HAL1b|LINE|L1 -6193 NM_000310 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding 1188608 chr19 27569756 27573213 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -221947 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 328271 chr17 61192228 61193138 + 790.59 NA intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 175021 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 281889 chr6 40057806 40058677 + 790.59 NA Intergenic L1PA14|LINE|L1 -123779 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 312107 chr14 45912203 45913436 + 790.59 NA Intergenic L1MA9|LINE|L1 -151340 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 322473 chr18 632083 632729 + 790.59 NA intron (NM_199167, intron 5 of 8) L1ME3E|LINE|L1 15706 NM_199167 27098 Hs.732341 NM_014410 ENSG00000079101 CLUL1 RA337M clusterin like 1 protein-coding 283998 chr20 59656415 59657105 + 790.59 NA intron (NM_001281507, intron 1 of 12) L1M4b|LINE|L1 -19901 NM_001199506 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 280220 chr11 84806146 84807254 + 790.59 NA intron (NM_001351274, intron 5 of 26) L1MD1|LINE|L1 -85758 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 596632 chr8 144981654 144983128 + 790.59 NA intron (NR_023392, intron 4 of 4) L1M4b|LINE|L1 -12474 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 180518-5 chr18 4502789 4503238 + 790.59 NA Intergenic L1M2|LINE|L1 -47706 NM_004746 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding 1272762 chr7 4428084 4431898 + 790.59 NA Intergenic L1M3|LINE|L1 -252304 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 297350 chr8 50992880 50993771 + 790.59 NA Intergenic L1M4|LINE|L1 816120 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding 607964 chr19 36339790 36341559 + 790.59 NA exon (NM_020917, exon 5 of 5) exon (NM_020917, exon 5 of 5) -8956 NR_038278 100506930 Hs.595153 NR_038278 ENSG00000232677 LINC00665 - long intergenic non-protein coding RNA 665 ncRNA 318696 chr3 193933748 193934810 + 790.59 NA Intergenic Intergenic 59959 NR_027764 100128023 Hs.730112 NR_027764 DPPA2P3 - developmental pluripotency associated 2 pseudogene 3 pseudo 1022497 chr22 27340076 27343435 + 790.59 NA Intergenic L1ME1|LINE|L1 31104 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA 709686 chr5 150978256 150980356 + 790.59 NA Intergenic Intergenic -32722 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 203709-4 chr5 150882864 150883356 + 790.59 NA intron (NM_001346557, intron 3 of 3) L1M1|LINE|L1 21873 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 272402 chr18 80089625 80090306 + 790.59 NA Intergenic L1M4|LINE|L1 -19297 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding 475496 chr16 71225639 71226857 + 790.59 NA intron (NM_001198543, intron 1 of 18) L1ME1|LINE|L1 4474 NM_017558 54768 Hs.351914 NM_017558 ENSG00000157423 HYDIN CILD5|HYDIN1|HYDIN2|PPP1R31 HYDIN axonemal central pair apparatus protein protein-coding 238056 chr10 117144106 117144763 + 790.59 NA Intergenic MIR|SINE|MIR -6164 NM_001112704 11023 Hs.441536 NM_199131 ENSG00000148704 VAX1 MCOPS11 ventral anterior homeobox 1 protein-coding 297701 chr16 12667706 12668384 + 790.59 NA intron (NM_001099455, intron 2 of 2) L1MEi|LINE|L1 -52276 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA 228481-5 chr8 139503132 139503796 + 790.59 NA Intergenic L1M5|LINE|L1 199659 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 227339 chr1 239475518 239476103 + 790.59 NA intron (NM_001347716, intron 1 of 7) intron (NM_001347716, intron 1 of 7) 89242 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding 292079 chr17 54916726 54917415 + 790.59 NA intron (NM_001321173, intron 7 of 9) HAL1ME|LINE|L1 16218 NM_005486 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding 191850-3 chr8 88908120 88908849 + 790.59 NA Intergenic L1MA6|LINE|L1 -581001 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 228393-4 chr20 52759729 52760421 + 790.59 NA Intergenic MIRb|SINE|MIR 139237 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 201425-4 chr7 39714297 39714778 + 790.59 NA Intergenic MSTA-int|LTR|ERVL-MaLR -19031 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA 243502 chr1 227332831 227333456 + 790.59 NA Intergenic Intergenic -14651 NM_001366019 8476 Hs.35433 NM_003607 ENSG00000143776 CDC42BPA MRCK|MRCKA|PK428 CDC42 binding protein kinase alpha protein-coding 200371-4 chr19 27573396 27574115 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -219676 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 616046 chr17 73730471 73732501 + 790.59 NA Intergenic MLT1F2|LTR|ERVL-MaLR -6368 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding 449758 chr22 34013249 34014552 + 790.59 NA Intergenic L1MCa|LINE|L1 -91012 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 184295-6 chr6 54223765 54224250 + 790.59 NA intron (NM_138569, intron 10 of 12) L1M4|LINE|L1 -84434 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding 627553 chr4 30441256 30443216 + 790.59 NA Intergenic L1M3c|LINE|L1 -278133 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 427622 chr2 31693590 31695399 + 790.59 NA Intergenic HUERS-P3-int|LTR|ERV1 109486 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 385281 chr1 222064990 222066420 + 790.59 NA Intergenic Intergenic -87185 NR_149057 105372950 Hs.185118 NR_149057 ENSG00000238042 LINC02257 - long intergenic non-protein coding RNA 2257 ncRNA 441325 chr2 89831822 89833446 + 790.59 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -194727 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 189215 chr10 67477612 67478051 + 790.59 NA intron (NM_001127384, intron 5 of 17) L1PA16|LINE|L1 -74421 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA 502025 chr5 179072248 179073514 + 790.59 NA intron (NM_014594, intron 2 of 4) MER33|DNA|hAT-Charlie 12508 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding 299107 chr5 124154929 124155874 + 790.59 NA intron (NR_125774, intron 4 of 5) L1ME2|LINE|L1 283119 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 351022 chr5 12825041 12826408 + 790.59 NA Intergenic L1PB4|LINE|L1 157865 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 1.00835e+06 chr22 27348762 27352492 + 790.59 NA Intergenic Intergenic 39976 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA 282329 chr10 31624488 31625594 + 790.59 NA Intergenic HAL1ME|LINE|L1 -225286 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 414269-2 chr20 52729021 52730459 + 790.59 NA Intergenic AluSg|SINE|Alu 108902 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 457488 chr11 130740004 130741189 + 790.59 NA Intergenic L1MEc|LINE|L1 67640 NM_001271983 283171 Hs.376151 NM_001271983 C11orf44 - chromosome 11 open reading frame 44 protein-coding 216973-5 chr9 36793311 36794135 + 790.59 NA Intergenic MIR|SINE|MIR 29876 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA 373949-2 chr22 27356121 27357150 + 790.59 NA Intergenic L1ME3|LINE|L1 45984 NR_134581 100507657 Hs.537371 NR_134581 ENSG00000226741 LINC02554 - long intergenic non-protein coding RNA 2554 ncRNA 191411-3 chr18 22658140 22658691 + 790.59 NA Intergenic L1PA3|LINE|L1 128422 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 211966 chr10 37957642 37958183 + 790.59 NA intron (NR_138064, intron 2 of 6) Tigger3a|DNA|TcMar-Tigger 18068 NR_138069 219749 Hs.499429 NM_145011 ENSG00000175395 ZNF25 KOX19|Zfp9 zinc finger protein 25 protein-coding 206520-4 chr22 33703780 33704261 + 790.59 NA TTS (NR_145833) TTS (NR_145833) 900 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA 334420-2 chr10 69549942 69550810 + 790.59 NA Intergenic L1ME4a|LINE|L1 23046 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding 251759 chr10 30482872 30483717 + 790.59 NA Intergenic Intergenic 48648 NM_001320961 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding 414269 chr15 59959786 59961127 + 790.59 NA Intergenic L1M4c|LINE|L1 -43855 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding 262300-3 chr4 100441963 100442768 + 790.59 NA intron (NM_001159694, intron 4 of 10) L1MA9|LINE|L1 -47118 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA 233751-5 chr5 17869936 17870955 + 790.59 NA intron (NR_134286, intron 4 of 7) L1MA2|LINE|L1 63171 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 330994 chr1 115568812 115570355 + 790.59 NA Intergenic L1MA4A|LINE|L1 -72387 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding 323615 chr18 75077304 75078336 + 790.59 NA Intergenic HAL1|LINE|L1 127693 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding 291113 chr19 34009834 34010755 + 790.59 NA Intergenic HAL1|LINE|L1 -162210 NM_001114093 26065 Hs.744009 NM_015578 ENSG00000257103 LSM14A C19orf13|FAM61A|RAP55|RAP55A LSM14A mRNA processing body assembly factor protein-coding 243326-2 chr2 185510682 185511407 + 790.59 NA Intergenic L1PB|LINE|L1 227675 NR_110215 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA 256942-2 chr6 26639091 26640173 + 790.59 NA intron (NM_001242798, intron 2 of 2) intron (NM_001242798, intron 2 of 2) 20114 NM_024639 79692 Hs.126280 NM_024639 ENSG00000181315 ZNF322 HCG12|ZNF322A|ZNF388|ZNF489 zinc finger protein 322 protein-coding 239988 chr10 41740174 41740945 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr 627486 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 701780 chr7 25370765 25373395 + 790.59 NA Intergenic HAL1|LINE|L1 -143594 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding 707403 chr2 98261745 98264066 + 790.59 NA intron (NM_001345864, intron 15 of 21) L1M3c|LINE|L1 -83250 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 244292-2 chr3 44736678 44737270 + 790.59 NA 3' UTR (NM_001258280, exon 3 of 3) 3' UTR (NM_001258280, exon 3 of 3) 7339 NM_001258280 115560 Hs.401045 NM_145044 ENSG00000186446 ZNF501 ZNF|ZNF52 zinc finger protein 501 protein-coding 258611 chr2 95142618 95143323 + 790.59 NA Intergenic MER89-int|LTR|ERV1 16615 NM_001318005 84874 Hs.355664 NM_032788 ENSG00000144026 ZNF514 - zinc finger protein 514 protein-coding 378956-2 chr12 37985640 37986904 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -330502 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 242272-3 chr2 63207627 63208386 + 790.59 NA intron (NR_148705, intron 13 of 16) L1M8|LINE|L1 -88464 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 611829 chr8 46362621 46364809 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr 253928 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 536020 chr19 36637407 36638955 + 790.59 NA 3' UTR (NM_001322826, exon 5 of 5) 3' UTR (NM_001322826, exon 5 of 5) 28656 NM_001322827 92283 Hs.590972 NM_153257 ENSG00000197808 ZNF461 GIOT-1|GIOT1|HZF28 zinc finger protein 461 protein-coding 257996-2 chr22 34144271 34144899 + 790.59 NA Intergenic L1PA13|LINE|L1 -221697 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 183153-3 chr15 67684509 67684861 + 790.59 NA intron (NM_001206804, intron 13 of 21) L1MEc|LINE|L1 135591 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding 554994 chr8 141829076 141831170 + 790.59 NA Intergenic Intergenic -43810 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 271787 chr2 16301036 16301754 + 790.59 NA Intergenic L1ME4a|LINE|L1 250968 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA 262300 chr16 82823544 82824286 + 790.59 NA non-coding (NR_110938, exon 2 of 3) non-coding (NR_110938, exon 2 of 3) 50596 NR_110938 101928446 Hs.684007 NR_110938 ENSG00000260862 LOC101928446 - uncharacterized LOC101928446 ncRNA 382119 chr5 7470951 7472053 + 790.59 NA intron (NM_020546, intron 2 of 24) L1ME4a|LINE|L1 75364 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding 408999 chr21 32212383 32213953 + 790.59 NA Intergenic L1ME4b|LINE|L1 65881 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding 216270 chr16 75169251 75169743 + 790.59 NA exon (NM_153688, exon 4 of 4) exon (NM_153688, exon 4 of 4) 20446 NM_001318475 162239 Hs.388813 NM_153688 ENSG00000184517 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding 311141-2 chr4 96446816 96447894 + 790.59 NA intron (NR_147149, intron 1 of 3) L1PA14|LINE|L1 136652 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA 297525 chr19 33897989 33898719 + 790.59 NA Intergenic L1MEg|LINE|L1 101484 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding 230150-2 chr19 37631990 37632618 + 790.59 NA 3' UTR (NM_001320671, exon 6 of 6) 3' UTR (NM_001320671, exon 6 of 6) 23161 NM_014898 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 1.08267e+06 chr7 7447170 7450212 + 790.59 NA intron (NM_001037763, intron 18 of 34) L1ME1|LINE|L1 87182 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 828715 chr6 169476604 169479969 + 790.59 NA intron (NR_146875, intron 19 of 20) intron (NR_146875, intron 19 of 20) 223743 NM_001350623 253769 Hs.131903 NM_182552 ENSG00000184465 WDR27 - WD repeat domain 27 protein-coding 775393 chr2 60230932 60233518 + 790.59 NA Intergenic L1MEg|LINE|L1 150811 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 351725 chr4 59479698 59480679 + 790.59 NA Intergenic L1MB1|LINE|L1 466615 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 270558 chr2 67026109 67026899 + 790.59 NA Intergenic Intergenic -59942 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA 237792-2 chr10 112029429 112030000 + 790.59 NA Intergenic MER67B|LTR|ERV1 154051 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding 912780 chr8 121067329 121070286 + 790.59 NA Intergenic L1M4b|LINE|L1 -256761 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 529520 chr19 43861845 43863751 + 790.59 NA Intergenic Intergenic 17338 NM_001033719 342908 Hs.76561 NM_001033719 ENSG00000176222 ZNF404 - zinc finger protein 404 protein-coding 456873 chr14 45353778 45355215 + 790.59 NA Intergenic L2b|LINE|L2 -101294 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 533561 chr14 60847653 60849307 + 790.59 NA intron (NM_002431, intron 6 of 7) intron (NM_002431, intron 6 of 7) 113719 NM_001177963 4331 Hs.509523 NM_002431 ENSG00000020426 MNAT1 CAP35|MAT1|RNF66|TFB3 MNAT1 component of CDK activating kinase protein-coding 489639 chr5 74533145 74535129 + 790.59 NA intron (NR_126354, intron 1 of 2) AluJb|SINE|Alu 2839 NR_126354 104310351 Hs.582291 NR_126354 ENSG00000248673 LINC01331 - long intergenic non-protein coding RNA 1331 ncRNA 211615-5 chr7 46820601 46821278 + 790.59 NA Intergenic L1HS|LINE|L1 -123817 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 450109 chr18 6342077 6343494 + 790.59 NA intron (NM_001365765, intron 1 of 18) L1MA10|LINE|L1 16245 NR_158611 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding 215392 chr10 104569722 104570294 + 790.59 NA Intergenic L1MA8|LINE|L1 -71282 NM_014978 22986 Hs.671950 NM_014978 ENSG00000156395 SORCS3 SORCS sortilin related VPS10 domain containing receptor 3 protein-coding 494558 chr10 41888117 41889958 + 790.59 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 479008 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 426128 chr3 113187439 113189109 + 790.59 NA Intergenic Tigger1|DNA|TcMar-Tigger -20543 NR_110823 101929717 Hs.638426 NR_110823 ENSG00000243795 LINC02044 - long intergenic non-protein coding RNA 2044 ncRNA 244029 chr14 65806852 65807599 + 790.59 NA Intergenic Intergenic 336123 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA 249739 chr20 58486190 58486811 + 790.59 NA intron (NR_130908, intron 1 of 1) L1ME3F|LINE|L1 28438 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 259050-2 chr8 133924476 133925241 + 790.59 NA Intergenic L2a|LINE|L2 38362 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 220311 chr19 31861160 31861825 + 790.59 NA Intergenic L1MA8|LINE|L1 -164370 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA 1375188 chr10 43614257 43618215 + 790.59 NA intron (NM_145312, intron 4 of 4) intron (NM_145312, intron 4 of 4) 9798 NM_145312 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding 408120 chr2 200150170 200151378 + 790.59 NA Intergenic HAL1|LINE|L1 -155105 NM_015535 26010 Hs.120323 NM_015535 ENSG00000196141 SPATS2L DNAPTP6|SGNP spermatogenesis associated serine rich 2 like protein-coding 269328-2 chr2 37806938 37807793 + 790.59 NA Intergenic L1MB7|LINE|L1 22346 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA 304026 chr2 103271564 103272380 + 790.59 NA Intergenic L3|LINE|CR1 -287543 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 194485-8 chr9 113039666 113040288 + 790.59 NA 3' UTR (NM_001282515, exon 4 of 4) 3' UTR (NM_001282515, exon 4 of 4) 16747 NM_001282515 7539 Hs.150406 NM_003408 ENSG00000136866 ZFP37 ZNF906|zfp-37 ZFP37 zinc finger protein protein-coding 260456 chr14 71747189 71748023 + 790.59 NA Intergenic Intergenic 161308 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 199141-8 chr8 139072542 139073334 + 790.59 NA Intergenic (T)n|Simple_repeat|Simple_repeat -158897 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 846898 chr19 36545454 36548551 + 790.59 NA exon (NM_001321351, exon 6 of 6) exon (NM_001321351, exon 6 of 6) -18731 NM_001166037 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding 237441 chr8 87038797 87039383 + 790.59 NA intron (NM_173538, intron 4 of 10) HAL1|LINE|L1 172675 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 237792-3 chr17 16623182 16623959 + 790.59 NA exon (NM_020787, exon 6 of 6) exon (NM_020787, exon 6 of 6) 30280 NM_020787 57547 Hs.128078 NM_020787 ENSG00000197566 ZNF624 - zinc finger protein 624 protein-coding 516606 chr8 139069341 139071248 + 790.59 NA Intergenic MLT1I|LTR|ERVL-MaLR -156253 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 319311 chr9 112996835 112997840 + 790.59 NA exon (NM_001101338, exon 5 of 5) exon (NM_001101338, exon 5 of 5) 14855 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding 353833 chr8 101480192 101481481 + 790.59 NA Intergenic L2a|LINE|L2 -11603 NM_024915 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding 384490 chr2 89780135 89781533 + 790.59 NA Intergenic Intergenic -142927 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 255800 chr7 85370026 85370944 + 790.59 NA Intergenic ERVL-E-int|LTR|ERVL -50637 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA 539710 chr8 134200531 134202094 + 790.59 NA Intergenic MIR|SINE|MIR 314816 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 235157-2 chr14 48761594 48762267 + 790.59 NA Intergenic Intergenic 824450 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 183066-5 chr8 114037591 114038419 + 790.59 NA Intergenic L1MA4A|LINE|L1 -601066 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 699497 chr8 139562577 139564797 + 790.59 NA Intergenic Intergenic 139436 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 215041 chr15 95484460 95485195 + 790.59 NA intron (NR_027133, intron 3 of 5) L1M4c|LINE|L1 51734 NR_027133 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA 192728-7 chr8 136165459 136166342 + 790.59 NA Intergenic MLT1E1|LTR|ERVL-MaLR -364898 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 187194 chr12 12649923 12650474 + 790.59 NA Intergenic AluJr|SINE|Alu 38322 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding 476989 chr12 124046810 124048261 + 790.59 NA intron (NM_001347902, intron 2 of 4) MER1A|DNA|hAT-Charlie 74320 NM_001347902 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding 279693 chr17 71929906 71930935 + 790.59 NA Intergenic Intergenic 95559 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 256678 chr2 226105428 226106212 + 790.59 NA Intergenic Intergenic -36974 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 577570 chr8 131682891 131684715 + 790.59 NA Intergenic Intergenic -220290 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 514411 chr8 142083724 142085320 + 790.59 NA Intergenic L1MC5|LINE|L1 -91817 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA 243590-3 chr16 65446979 65448086 + 790.59 NA intron (NR_027755, intron 2 of 8) L2|LINE|L2 128768 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA 332838 chr4 87332773 87333734 + 790.59 NA Intergenic L1PA14|LINE|L1 -10371 NM_001136230 345275 Hs.284414 NM_178135 ENSG00000170509 HSD17B13 HMFN0376|NIIL497|SCDR9|SDR16C3 hydroxysteroid 17-beta dehydrogenase 13 protein-coding 351901 chr20 59796206 59797212 + 790.59 NA intron (NM_080672, intron 7 of 12) L1M2|LINE|L1 75499 NM_183244 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 186404-6 chr8 126359072 126359701 + 790.59 NA Intergenic Intergenic 33891 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 239812-5 chr8 87379893 87380562 + 790.59 NA intron (NM_173538, intron 10 of 10) intron (NM_173538, intron 10 of 10) 493788 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 218554-2 chr6 99638069 99638927 + 790.59 NA Intergenic THE1B-int|LTR|ERVL-MaLR 31724 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding 411810 chr12 28913297 28914567 + 790.59 NA Intergenic L1M2|LINE|L1 -235346 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 400566 chr4 43440080 43441550 + 790.59 NA Intergenic Intergenic 51728 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 424459 chr8 116310508 116312021 + 790.59 NA intron (NR_046215, intron 1 of 13) L1MEd|LINE|L1 13795 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA 296559 chr4 112480619 112481496 + 790.59 NA Intergenic L1MEc|LINE|L1 -34322 NR_161159 105377372 NR_161159 LOC105377372 - uncharacterized LOC105377372 ncRNA 711970 chr8 122333168 122335240 + 790.59 NA Intergenic Intergenic 234440 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 217939 chr21 32122377 32122984 + 790.59 NA Intergenic Intergenic -36385 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA 274423-4 chr21 29201871 29202738 + 790.59 NA intron (NR_027072, intron 1 of 1) L1M4|LINE|L1 8810 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA 212142-3 chr8 88432324 88432974 + 790.59 NA Intergenic L1M2|LINE|L1 -105166 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 398897 chr22 28669251 28670583 + 790.59 NA intron (NM_001145418, intron 1 of 22) intron (NM_001145418, intron 1 of 22) 9948 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding 193695-9 chr22 23057809 23058313 + 790.59 NA Intergenic AluSz6|SINE|Alu -12458 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding 272314 chr21 28373137 28373911 + 790.59 NA Intergenic L1PB2|LINE|L1 -144857 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 301039 chr8 86263657 86264514 + 790.59 NA Intergenic L1MC4|LINE|L1 -33704 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 285667-2 chr11 55054885 55055576 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -206925 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 642486 chr19 27617451 27619669 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -174871 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 423669 chrY 56833344 56834624 + 790.59 NA Intergenic AluJb|SINE|Alu -120271 NM_005840 10251 Hs.381912 NM_005840 ENSG00000168939 SPRY3 spry-3 sprouty RTK signaling antagonist 3 protein-coding 297438 chr8 139539258 139540447 + 790.59 NA Intergenic Intergenic 163271 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 547176 chr6 155924942 155926634 + 790.59 NA Intergenic L1MB8|LINE|L1 -21009 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA 208364 chr16 46398627 46399181 + 790.59 NA Intergenic Intergenic 170193 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 264321-3 chr3 41470504 41471506 + 790.59 NA intron (NR_136342, intron 30 of 34) L1MA7|LINE|L1 271500 NM_001904 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding 245434 chr1 42057531 42058380 + 790.59 NA Intergenic L1ME3Cz|LINE|L1 -22021 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 382470 chr2 98285651 98286879 + 790.59 NA intron (NM_001345864, intron 16 of 21) L1MB7|LINE|L1 -59890 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 352428-2 chr2 114369311 114370555 + 790.59 NA Intergenic L2|LINE|L2 -72708 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 418134 chr6 40102029 40103515 + 790.59 NA Intergenic L1MB7|LINE|L1 -168310 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 708281 chr19 29176323 29178677 + 790.59 NA Intergenic L1MA2|LINE|L1 35651 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 429642 chr3 111746587 111747833 + 790.59 NA intron (NM_001185106, intron 4 of 4) intron (NM_001185106, intron 4 of 4) 14714 NM_001134437 90102 Hs.603252 NM_145753 ENSG00000144824 PHLDB2 LL5b|LL5beta pleckstrin homology like domain family B member 2 protein-coding 278639 chr2 5788107 5789198 + 790.59 NA Intergenic L1MEi|LINE|L1 23944 NR_146954 105373400 Hs.97467 NR_146954 ENSG00000237266 LINC01810 - long intergenic non-protein coding RNA 1810 ncRNA 230852-3 chr8 139240686 139241465 + 790.59 NA Intergenic Intergenic -327034 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 274598-2 chr20 63147180 63148043 + 790.59 NA Intergenic L1ME2|LINE|L1 -30889 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA 398809 chr10 112030290 112031702 + 790.59 NA Intergenic Charlie1a|DNA|hAT-Charlie 152769 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding 246664-7 chr7 98096699 98097430 + 790.59 NA Intergenic L1MB7|LINE|L1 -9798 NM_014916 22853 Hs.444179 NM_014916 ENSG00000164715 LMTK2 AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK lemur tyrosine kinase 2 protein-coding 284788-2 chr2 89828566 89829676 + 790.59 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -191214 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 829154-2 chr8 144840717 144843658 + 790.59 NA exon (NM_001349806, exon 5 of 5) exon (NM_001349806, exon 5 of 5) 10861 NM_001081004 28991 Hs.493218 NM_014066 ENSG00000170619 COMMD5 HCARG|HT002 COMM domain containing 5 protein-coding 291904-2 chr20 40729348 40730485 + 790.59 NA Intergenic AluSx|SINE|Alu -15293 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA 220311-2 chr3 96693463 96694226 + 790.59 NA Intergenic L1MA2|LINE|L1 -120750 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 346015 chr19 24366436 24367619 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -203580 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 290147 chr18 13315998 13316717 + 790.59 NA intron (NM_181482, intron 2 of 5) L1MEg|LINE|L1 38252 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 328534-2 chr20 32955706 32956922 + 790.59 NA intron (NM_001143967, intron 23 of 26) L1ME1|LINE|L1 48119 NM_080675 140732 Hs.375186 NM_080675 ENSG00000167098 SUN5 SPAG4L|SPGF16|TSARG4|dJ726C3.1 Sad1 and UNC84 domain containing 5 protein-coding 200371-5 chr19 27583566 27584019 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -209639 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 676570 chr7 4420233 4422912 + 790.59 NA Intergenic L1MD2|LINE|L1 -260723 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 872724 chr8 123995251 123998377 + 790.59 NA intron (NM_001039112, intron 12 of 40) L1M1|LINE|L1 43968 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA 251759-3 chr9 136314778 136315455 + 790.59 NA Intergenic HAL1|LINE|L1 -8215 NM_001291516 399693 Hs.530383 NM_001291516 ENSG00000260220 CCDC187 - coiled-coil domain containing 187 protein-coding 825289 chr6 38471105 38473886 + 790.59 NA intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) -9101 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 353570 chr9 96758355 96760013 + 790.59 NA exon (NM_014930, exon 6 of 6) exon (NM_014930, exon 6 of 6) 18903 NM_001314060 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding 493329 chr6 40185762 40187287 + 790.59 NA Intergenic LTR8B|LTR|ERV1 169482 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 304465-2 chr7 112828746 112829604 + 790.59 NA intron (NM_152556, intron 4 of 4) L1ME1|LINE|L1 -38752 NR_109840 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding 285842-3 chr2 107476034 107476617 + 790.59 NA Intergenic L1M4|LINE|L1 -53094 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA 934741 chr10 41895889 41899054 + 790.59 NA Intergenic (AATGG)n|Simple_repeat|Simple_repeat 470574 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 238056-3 chr2 217767985 217768560 + 790.59 NA Intergenic L1MEf|LINE|L1 -11679 NR_026597 729582 Hs.572788 NR_026597 DIRC3 - disrupted in renal carcinoma 3 ncRNA 286809 chr1 247154855 247155690 + 790.59 NA 3' UTR (NM_001297568, exon 4 of 4) 3' UTR (NM_001297568, exon 4 of 4) 16745 NM_001243740 7678 Hs.421238 NM_003431 ENSG00000196418 ZNF124 HZF-16|HZF16|ZK7 zinc finger protein 124 protein-coding 524425 chr19 34760817 34762609 + 790.59 NA intron (NM_001007248, intron 3 of 3) L1ME3F|LINE|L1 11502 NM_001007248 148103 Hs.590961 NM_001007247 ENSG00000153896 ZNF599 - zinc finger protein 599 protein-coding 470577 chr8 126597649 126598912 + 790.59 NA Intergenic LOR1a|LTR|ERV1 -39802 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 190181-6 chr3 181023476 181023973 + 790.59 NA Intergenic L1MB7|LINE|L1 -32956 NR_075091 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA 529696 chr17 58948352 58950360 + 790.59 NA intron (NM_014906, intron 1 of 6) L1M2c|LINE|L1 157524 NM_001353084 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding 318696-2 chr8 124878196 124879073 + 790.59 NA Intergenic MLT1A0|LTR|ERVL-MaLR -56576 NR_039809 100616255 NR_039809 ENSG00000263735 MIR4662B - microRNA 4662b ncRNA 194397 chr11 10234175 10234591 + 790.59 NA intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 59824 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding 320716 chr1 247190417 247191482 + 790.59 NA Intergenic Intergenic 11111 NR_037480 100500849 NR_037480 ENSG00000283881 MIR3916 mir-3916 microRNA 3916 ncRNA 788482 chr10 43032375 43034922 + 790.59 NA Intergenic L1M4c|LINE|L1 36085 NR_049836 100847014 NR_049836 ENSG00000263795 MIR5100 - microRNA 5100 ncRNA 372280 chr8 126715231 126716555 + 790.59 NA Intergenic Intergenic -157415 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 671651 chr7 3737498 3739670 + 790.59 NA intron (NM_152744, intron 4 of 44) L1MA9|LINE|L1 -391101 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 614991 chr8 86236187 86238011 + 790.59 NA Intergenic Tigger1|DNA|TcMar-Tigger -6718 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 243150-3 chr3 44716329 44717282 + 790.59 NA intron (NM_033210, intron 2 of 3) L1ME4a|LINE|L1 4145 NM_001134442 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 438075 chr2 72762067 72763341 + 790.59 NA intron (NR_135774, intron 1 of 19) L1MEc|LINE|L1 63329 NM_015189 23233 Hs.303454 NM_015189 ENSG00000144036 EXOC6B SEC15B|SEC15L2|SEMDJL3 exocyst complex component 6B protein-coding 212405 chr3 192113596 192114403 + 790.59 NA Intergenic Tigger1|DNA|TcMar-Tigger -124631 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 291991 chr5 46127132 46127941 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr -431156 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 257732 chr12 34409480 34410308 + 790.59 NA Intergenic ALR/Alpha|Satellite|centr 387398 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 1144687 chr19 37564351 37568335 + 790.59 NA intron (NM_001290314, intron 4 of 4) intron (NM_001290314, intron 4 of 4) 14969 NM_152606 163255 Hs.728927 NM_152606 ENSG00000171817 ZNF540 Nbla10512 zinc finger protein 540 protein-coding 199317 chr10 78554914 78555576 + 790.59 NA Intergenic L2a|LINE|L2 287903 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 186491-2 chr15 95956178 95956750 + 790.59 NA Intergenic Intergenic 171377 NR_158193 105369212 NR_158193 LOC105369212 - uncharacterized LOC105369212 ncRNA 311141 chr10 111040947 111041635 + 790.59 NA Intergenic L1M1|LINE|L1 -35738 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding 491308 chr10 77367817 77369944 + 790.59 NA intron (NR_126365, intron 3 of 5) L1ME1|LINE|L1 18008 NR_126365 101929286 Hs.568867 NR_126365 KCNMA1-AS3 - KCNMA1 antisense RNA 3 ncRNA 240691-4 chr7 54215259 54215921 + 790.59 NA Intergenic L1M1|LINE|L1 -115107 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 298843 chr5 178932610 178933448 + 790.59 NA 3' UTR (NM_030613, exon 5 of 5) 3' UTR (NM_030613, exon 5 of 5) -8169 NM_001323307 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 543838 chr7 32110874 32112476 + 790.59 NA intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -40239 NM_001322056 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 495612 chr8 119318149 119319755 + 790.59 NA Intergenic MLT1C|LTR|ERVL-MaLR -6219 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA 179728-3 chr4 36591717 36592176 + 790.59 NA intron (NR_149124, intron 2 of 4) L1MC3|LINE|L1 49954 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA 544190 chr5 8798668 8800612 + 790.59 NA Intergenic L1M3de|LINE|L1 -40092 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA 919017 chr20 46453948 46457005 + 790.59 NA Intergenic Intergenic 2167 NR_045983 100130934 Hs.712133 NM_173643 ZNF663P ZNF663 zinc finger protein 663, pseudogene pseudo 1160147 chr8 139177703 139181253 + 790.59 NA Intergenic MER61E|LTR|ERV1 -265437 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 224264 chr14 44421164 44421891 + 790.59 NA Intergenic L1MA3|LINE|L1 85756 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 212581 chr20 37665289 37665823 + 790.59 NA Intergenic L1MB8|LINE|L1 -11354 NR_040021 100287792 Hs.517026 NM_001001690 ENSG00000204117 LOC100287792 - uncharacterized LOC100287792 ncRNA 336528 chr10 43518751 43519452 + 790.59 NA Intergenic FLAM_A|SINE|Alu 49358 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 338373 chr4 38255458 38256156 + 790.59 NA Intergenic LOR1b|LTR|ERV1 -111107 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA 246928 chr10 59913553 59914158 + 702.747 NA Intergenic Intergenic -7299 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding 323264 chr22 34844700 34845926 + 702.747 NA intron (NR_138042, intron 3 of 4) (TA)n|Simple_repeat|Simple_repeat 152603 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 237616 chr11 3359444 3360302 + 702.747 NA exon (NM_001130520, exon 6 of 6) exon (NM_001130520, exon 6 of 6) 19273 NM_001256823 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding 247367-2 chr20 59658475 59659243 + 702.747 NA intron (NM_001281507, intron 1 of 12) L1M4b|LINE|L1 -17802 NM_001199506 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 339075-3 chr6 156576976 156578278 + 702.747 NA Intergenic AluJb|SINE|Alu 198877 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA 366219 chr4 31185537 31186793 + 702.747 NA intron (NR_125935, intron 2 of 4) L1M7|LINE|L1 15021 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 211263-2 chr7 24517177 24517900 + 702.747 NA Intergenic Intergenic -55914 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding 202128-4 chr5 178882574 178883210 + 702.747 NA exon (NM_058230, exon 5 of 5) exon (NM_058230, exon 5 of 5) -13021 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding 287336 chr12 34543692 34544647 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 521673 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 217588-7 chr8 139036905 139037763 + 702.747 NA Intergenic Intergenic -123293 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 520120 chr5 4234154 4235647 + 702.747 NA Intergenic HAL1|LINE|L1 -538581 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 269328 chr10 21233548 21234269 + 702.747 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 59606 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA 212054-5 chr22 34028236 34028899 + 702.747 NA Intergenic HAL1|LINE|L1 -105679 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 420506 chr11 54942612 54943829 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 236388 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 406890 chr12 37931099 37932309 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -385070 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 350846 chr19 36642928 36644189 + 702.747 NA intron (NM_001297623, intron 4 of 4) Charlie1|DNA|hAT-Charlie 23279 NM_001322827 92283 Hs.590972 NM_153257 ENSG00000197808 ZNF461 GIOT-1|GIOT1|HZF28 zinc finger protein 461 protein-coding 282153 chr14 76893246 76894140 + 702.747 NA Intergenic HAL1|LINE|L1 -65945 NR_133913 105370578 Hs.574184 NR_133913 ENSG00000258602 LINC01629 linc-KIAA1737-2 long intergenic non-protein coding RNA 1629 ncRNA 327831-2 chr8 10009093 10010142 + 702.747 NA Intergenic HAL1b|LINE|L1 -44675 NM_012331 4482 Hs.490981 NM_012331 ENSG00000175806 MSRA PMSR methionine sulfoxide reductase A protein-coding 623161 chr14 56972617 56975123 + 702.747 NA Intergenic Intergenic 160712 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA 286809-4 chr2 45876557 45877659 + 702.747 NA intron (NM_005400, intron 2 of 14) L1MEd|LINE|L1 225433 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding 244644-2 chr5 6888473 6889385 + 702.747 NA Intergenic MER74A|LTR|ERVL -61008 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA 260456-2 chr16 35446619 35447293 + 702.747 NA Intergenic Intergenic 33640 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 324669 chr11 87336219 87337713 + 702.747 NA Intergenic L1ME1|LINE|L1 299032 NM_001168724 65084 Hs.188591 NM_022918 ENSG00000166575 TMEM135 PMP52 transmembrane protein 135 protein-coding 483753 chr17 83140856 83142649 + 702.747 NA Intergenic L1MA7|LINE|L1 60606 NM_001363853 284207 Hs.378821 NM_001004431 ENSG00000176845 METRNL - meteorin like, glial cell differentiation regulator protein-coding 195627-6 chr3 68312035 68312678 + 702.747 NA intron (NM_001252216, intron 2 of 4) THE1B-int|LTR|ERVL-MaLR -188281 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA 286721-3 chr8 81538545 81539661 + 702.747 NA Intergenic AluSz6|SINE|Alu -7713 NM_001105281 646486 Hs.586370 NM_001105281 ENSG00000197416 FABP12 - fatty acid binding protein 12 protein-coding 183153 chr10 113595908 113596446 + 702.747 NA intron (NM_001322945, intron 36 of 40) intron (NM_001322945, intron 36 of 40) 43124 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding 248948 chr19 28764772 28765780 + 702.747 NA Intergenic L1PBa|LINE|L1 -37582 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo 209946-2 chr10 49265248 49265913 + 702.747 NA Intergenic L1MDa|LINE|L1 33313 NR_108038 100506769 Hs.562293 NR_108038 C10orf71-AS1 - C10orf71 antisense RNA 1 ncRNA 291464 chr10 129490181 129491252 + 702.747 NA intron (NM_002412, intron 1 of 4) L1ME3Cz|LINE|L1 23475 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding 546122-2 chr20 43808107 43810431 + 702.747 NA Intergenic L1MB7|LINE|L1 -82267 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding 261422-3 chr7 45995943 45996904 + 702.747 NA Intergenic L1M4|LINE|L1 -75151 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 208628-3 chr2 211684699 211685318 + 702.747 NA intron (NM_001042599, intron 12 of 26) LTR26|LTR|ERV1 741352 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA 254570-5 chr2 71885738 71886739 + 702.747 NA Intergenic MLT1L|LTR|ERVL-MaLR 261624 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 367273 chr3 26821567 26823132 + 702.747 NA Intergenic MER61-int|LTR|ERV1 127792 NM_001317811 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding 228832-2 chr7 1685173 1685891 + 702.747 NA Intergenic L1MB8|LINE|L1 -2587 NM_001128636 392617 Hs.42896 NM_001128636 ENSG00000225968 ELFN1 PPP1R28 extracellular leucine rich repeat and fibronectin type III domain containing 1 protein-coding 177883-4 chr18 77798295 77798917 + 702.747 NA Intergenic L1MDa|LINE|L1 195121 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA 466273 chr16 62677563 62679232 + 702.747 NA Intergenic Intergenic -641959 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 336089-3 chr4 32606137 32607331 + 702.747 NA Intergenic L1M4|LINE|L1 255696 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 199404-2 chr6 40065214 40065905 + 702.747 NA Intergenic Kanga2_a|DNA|TcMar-Tc2 -131097 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 224967-5 chr8 124048072 124048726 + 702.747 NA intron (NR_103547, intron 3 of 4) L2a|LINE|L2 -7617 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA 240691 chr12 133175073 133175718 + 702.747 NA Intergenic L1PB4|LINE|L1 -6100 NM_001165881 10795 Hs.124047 NM_003415 ENSG00000090612 ZNF268 HZF3 zinc finger protein 268 protein-coding 650041 chr8 90138241 90140419 + 702.747 NA Intergenic L1MEf|LINE|L1 -56451 NM_001366795 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding 218115-4 chr4 52694418 52694911 + 702.747 NA Intergenic L1PA15|LINE|L1 -17730 NR_145129 57291 Hs.744077 NR_024031 ENSG00000226950 DANCR AGU2|ANCR|KIAA0114|SNHG13|lncRNA-ANCR differentiation antagonizing non-protein coding RNA ncRNA 195627-5 chr3 27265086 27265787 + 702.747 NA intron (NM_152534, intron 23 of 38) L1MD|LINE|L1 -48913 NM_001031741 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 680172 chr20 58530169 58532966 + 702.747 NA intron (NR_034147, intron 5 of 6) L1MCc|LINE|L1 -16168 NM_001304787 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 191499-2 chr22 22838681 22839533 + 702.747 NA Intergenic Intergenic 16331 NR_030755 723778 NR_030755 ENSG00000284049 MIR650 MIRN650|hsa-mir-650 microRNA 650 ncRNA 221277 chr1 34502524 34503277 + 702.747 NA Intergenic Intergenic 166794 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 239812-4 chr5 167677298 167678110 + 702.747 NA intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) -77225 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding 219784-6 chr8 138234928 138235780 + 702.747 NA intron (NM_015912, intron 7 of 19) L2b|LINE|L2 -151809 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 509140 chr10 43644261 43646147 + 702.747 NA promoter-TSS (NR_047558) promoter-TSS (NR_047558) -738 NR_047558 414208 Hs.608956 NR_047558 ENSG00000230565 ZNF32-AS2 ZNF32OS2|b402L1.7 ZNF32 antisense RNA 2 ncRNA 265463 chr2 121674404 121675147 + 702.747 NA intron (NR_037857, intron 2 of 3) L1PBa|LINE|L1 24786 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 476111 chr8 116371319 116372805 + 702.747 NA Intergenic L1PA15-16|LINE|L1 -47003 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA 205378-2 chr12 14076650 14077276 + 702.747 NA Intergenic Tigger3b|DNA|TcMar-Tigger -96607 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding 248509-2 chr19 53235329 53236027 + 702.747 NA 3' UTR (NM_182609, exon 5 of 5) 3' UTR (NM_182609, exon 5 of 5) 19172 NM_001317998 342926 Hs.20506 NM_182609 ENSG00000197928 ZNF677 - zinc finger protein 677 protein-coding 483314 chr14 61869283 61871205 + 702.747 NA intron (NM_001367656, intron 1 of 7) L1ME1|LINE|L1 -57451 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 233488-2 chr2 107473980 107474780 + 702.747 NA Intergenic L1M4|LINE|L1 -55039 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA 225670-2 chr19 14619148 14619990 + 702.747 NA intron (NM_032571, intron 15 of 15) intron (NM_032571, intron 15 of 15) -2644 NR_132784 106635534 NR_132784 SNORA104 - small nucleolar RNA, H/ACA box 104 snoRNA 220663-2 chr2 44310116 44311023 + 702.747 NA intron (NM_000341, intron 7 of 9) L1MB4|LINE|L1 35089 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding 234103 chr19 43843951 43844634 + 702.747 NA intron (NM_181845, intron 6 of 6) intron (NM_181845, intron 6 of 6) 16971 NM_001297752 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding 317027 chr2 187154914 187156170 + 702.747 NA Intergenic L1MEg|LINE|L1 292710 NM_001369435 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding 375355 chr7 62817513 62818543 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 486028 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 263794-2 chr6 49096604 49097199 + 702.747 NA Intergenic (TATAT)n|Simple_repeat|Simple_repeat 366352 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding 257469-2 chr5 65346026 65347089 + 702.747 NA intron (NR_135689, intron 7 of 25) L1MA7|LINE|L1 135363 NR_135689 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding 301127-3 chr8 126943086 126944047 + 702.747 NA Intergenic L1MB7|LINE|L1 -69588 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 247016 chr11 69253356 69254130 + 702.747 NA Intergenic Intergenic -40412 NM_001293294 26579 Hs.523848 NM_138768 ENSG00000172927 MYEOV OCIM myeloma overexpressed protein-coding 208716 chr1 118551802 118552627 + 702.747 NA Intergenic L1PA14|LINE|L1 -366986 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 263179-5 chr5 127252082 127253004 + 702.747 NA Intergenic L1ME4a|LINE|L1 -38221 NM_001308119 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding 221102-4 chr6 156332934 156333652 + 702.747 NA Intergenic L1MC1|LINE|L1 -45457 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA 335913 chr10 41807145 41808591 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 560177 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 230062-5 chr15 60736356 60737074 + 702.747 NA intron (NM_134261, intron 1 of 10) intron (NM_134261, intron 1 of 10) 55146 NR_120318 100996876 Hs.511626 NR_120318 RORA-AS2 - RORA antisense RNA 2 ncRNA 219521 chr10 49062260 49062934 + 702.747 NA intron (NM_001031746, intron 5 of 7) L1ME1|LINE|L1 52925 NM_144984 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding 212932-3 chr18 13852661 13853345 + 702.747 NA Intergenic L1MCc|LINE|L1 28854 NM_005913 4161 Hs.248145 NM_005913 ENSG00000176136 MC5R MC2 melanocortin 5 receptor protein-coding 231731-2 chr3 98173379 98174118 + 702.747 NA Intergenic MER34B-int|LTR|ERV1 5048 NM_001005515 403274 Hs.554713 NM_001005515 ENSG00000233412 OR5H15 - olfactory receptor family 5 subfamily H member 15 protein-coding 181572-11 chr5 178925753 178926337 + 702.747 NA intron (NM_030613, intron 4 of 4) AluJb|SINE|Alu -15153 NM_001323307 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 256327 chr15 91164811 91166030 + 702.747 NA intron (NM_001323040, intron 2 of 12) MER2|DNA|TcMar-Tigger 63624 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding 274950-2 chr3 158200737 158202126 + 702.747 NA intron (NM_001271834, intron 3 of 8) L1MEf|LINE|L1 91342 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding 193168-4 chr17 80231803 80232247 + 702.747 NA intron (NM_001166348, intron 6 of 16) L1MEc|LINE|L1 11598 NM_001166347 284129 Hs.4866 NM_173626 ENSG00000181045 SLC26A11 - solute carrier family 26 member 11 protein-coding 416729 chr10 75795050 75796593 + 702.747 NA intron (NM_032024, intron 1 of 5) L1M5|LINE|L1 13060 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 286194 chr20 31186260 31187373 + 702.747 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -70848 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 231028 chr2 80930011 80930703 + 702.747 NA Intergenic L1MB5|LINE|L1 536589 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 273193 chr2 104964174 104965022 + 702.747 NA intron (NR_110603, intron 1 of 2) L1MB2|LINE|L1 -73471 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding 416729-2 chr2 102217470 102218823 + 702.747 NA intron (NM_001351447, intron 4 of 9) L1M2|LINE|L1 30832 NM_001351446 8808 Hs.659863 NM_003854 ENSG00000115598 IL1RL2 IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2 interleukin 1 receptor like 2 protein-coding 239812-3 chr3 195190352 195191426 + 702.747 NA intron (NM_152531, intron 2 of 3) L1M4a2|LINE|L1 43018 NR_102710 101410543 Hs.658170 NR_102710 ENSG00000230266 XXYLT1-AS2 - XXYLT1 antisense RNA 2 ncRNA 329940 chr8 134408692 134410152 + 702.747 NA Intergenic Intergenic -188649 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 466536 chr4 64232413 64234207 + 702.747 NA Intergenic MER50|LTR|ERV1 176140 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 275125 chr19 56441118 56442101 + 702.747 NA exon (NM_001321356, exon 7 of 7) exon (NM_001321356, exon 7 of 7) 35736 NM_001321356 63934 Hs.676605 NM_022103 ENSG00000198046 ZNF667 MIPU1 zinc finger protein 667 protein-coding 193783 chr1 246986460 246987153 + 702.747 NA 3' UTR (NM_020394, exon 4 of 4) 3' UTR (NM_020394, exon 4 of 4) 21251 NM_001204221 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding 224703-5 chr6 165145284 165146122 + 702.747 NA Intergenic Intergenic 163902 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding 321155-2 chr9 77523912 77525167 + 702.747 NA intron (NR_121184, intron 4 of 4) intron (NR_121184, intron 4 of 4) 76890 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA 1142316 chr2 79545319 79550224 + 702.747 NA intron (NM_001282598, intron 1 of 17) intron (NM_001282598, intron 1 of 17) 24588 NM_001282598 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 209594-2 chr11 11749741 11750368 + 702.747 NA Intergenic Intergenic 33168 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA 568961 chr8 122959787 122961571 + 702.747 NA intron (NM_001362797, intron 4 of 4) intron (NM_001362797, intron 4 of 4) 65093 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding 293573 chr5 45559994 45561024 + 702.747 NA intron (NM_021072, intron 2 of 7) BLACKJACK|DNA|hAT-Blackjack 135871 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 323791 chr8 123583604 123584822 + 702.747 NA Intergenic AluSx|SINE|Alu -43007 NM_001242463 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding 241833-2 chr8 138701262 138702035 + 702.747 NA intron (NM_152888, intron 31 of 64) MIR|SINE|MIR -203918 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 205378-11 chr5 40926336 40927009 + 702.747 NA intron (NM_000587, intron 1 of 17) L1MA3|LINE|L1 17175 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding 455819 chr2 126543465 126544966 + 702.747 NA Intergenic L1MCa|LINE|L1 -111720 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 409350 chr8 130830686 130832440 + 702.747 NA intron (NM_001115, intron 12 of 17) L2c|LINE|L2 209346 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 204412-3 chr6 38474834 38475521 + 702.747 NA intron (NM_001172418, intron 5 of 10) L1ME4a|LINE|L1 -6419 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 201952-10 chr8 75825462 75826136 + 702.747 NA Intergenic Intergenic 285831 NM_004133 3174 Hs.241529 NM_004133 ENSG00000164749 HNF4G NR2A2|NR2A3 hepatocyte nuclear factor 4 gamma protein-coding 1100414 chr14 54093713 54097206 + 702.747 NA Intergenic L1MB8|LINE|L1 -138568 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding 415060 chr2 34519110 34520848 + 702.747 NA Intergenic L1ME3|LINE|L1 -157578 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 405836 chr10 125238467 125239936 + 702.747 NA Intergenic L1ME3B|LINE|L1 -78171 NM_001083914 1488 Hs.501345 NM_001329 ENSG00000175029 CTBP2 - C-terminal binding protein 2 protein-coding 294539-5 chr8 139524255 139525185 + 702.747 NA Intergenic Intergenic 178403 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 184910 chr14 72220801 72221358 + 702.747 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 287552 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 232521 chr14 71253314 71253893 + 702.747 NA Intergenic L1MC2|LINE|L1 -66873 NM_001354286 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 238143 chr17 72534504 72535322 + 702.747 NA intron (NR_036488, intron 1 of 3) L2b|LINE|L2 57891 NR_137280 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA 344609 chr5 3074514 3075682 + 702.747 NA Intergenic Intergenic -102737 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA 372105 chr5 104509620 104511061 + 702.747 NA Intergenic L1M3|LINE|L1 -589134 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 687375 chr2 146295049 146297288 + 702.747 NA Intergenic L1MCc|LINE|L1 -290889 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 500004-2 chr8 102018607 102020723 + 702.747 NA intron (NM_001040624, intron 3 of 7) intron (NM_001040624, intron 3 of 7) 35233 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA 320365 chr7 62654808 62656067 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 648619 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 219696-2 chr21 20506114 20506768 + 702.747 NA Intergenic L1PA15-16|LINE|L1 -247756 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA 287160 chr1 91061796 91062550 + 702.747 NA Intergenic Intergenic -39918 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding 283383-2 chr8 85408724 85409571 + 702.747 NA Intergenic L1MB7|LINE|L1 -29712 NM_005181 761 Hs.82129 NM_005181 ENSG00000164879 CA3 CAIII|Car3 carbonic anhydrase 3 protein-coding 921389 chr18 14102546 14105167 + 702.747 NA 3' UTR (NM_145287, exon 3 of 3) 3' UTR (NM_145287, exon 3 of 3) 28579 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding 181309-5 chr12 133123720 133124441 + 702.747 NA intron (NM_001277291, intron 1 of 1) L1M2|LINE|L1 6393 NM_001277291 101060200 Hs.614816 NM_001277291 ENSG00000214029 ZNF891 - zinc finger protein 891 protein-coding 242975-5 chr7 82845984 82847070 + 702.747 NA intron (NM_033026, intron 12 of 24) (TATCTA)n|Simple_repeat|Simple_repeat 316357 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding 307627 chr19 24338858 24339764 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -175864 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 200722-4 chr4 91832466 91833186 + 702.747 NA Intergenic L1PA15-16|LINE|L1 444476 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 204587-4 chr18 9998998 9999612 + 702.747 NA Intergenic L1M2|LINE|L1 85289 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding 249563-2 chr7 81261121 81262042 + 702.747 NA Intergenic L1MC1|LINE|L1 300238 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA 544277 chr14 60409907 60411788 + 702.747 NA Intergenic L1PA15-16|LINE|L1 75216 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 229447 chr16 31599016 31599759 + 702.747 NA Intergenic L1MC3|LINE|L1 -29863 NR_027011 440359 Hs.650902 NR_027011 YBX3P1 CSDAP1 Y-box binding protein 3 pseudogene 1 pseudo 343731-2 chr18 80087627 80089079 + 702.747 NA Intergenic L1M4|LINE|L1 -20909 NM_014913 22850 Hs.131915 NM_014913 ENSG00000101544 ADNP2 ZNF508 ADNP homeobox 2 protein-coding 180694-2 chr11 41839579 41840229 + 702.747 NA Intergenic L1MEd|LINE|L1 125336 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA 264496 chr15 27509436 27510250 + 702.747 NA intron (NM_033223, intron 6 of 9) L1MCa|LINE|L1 -348524 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 198438 chr10 31437056 31437671 + 702.747 NA intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -37608 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 533385 chr20 31071812 31073618 + 702.747 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -184949 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 190796-4 chr2 52682956 52683505 + 702.747 NA Intergenic L1MA4A|LINE|L1 19385 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 184559-7 chr3 190290499 190291000 + 702.747 NA Intergenic Intergenic 31697 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding 220136-3 chr22 36881375 36882288 + 702.747 NA Intergenic L1M4a2|LINE|L1 -11388 NR_147197 107985578 Hs.474781 NR_147197 ENSG00000183822 NCF4-AS1 - NCF4 antisense RNA 1 ncRNA 342150 chr11 9112453 9113618 + 702.747 NA Intergenic AluYm1|SINE|Alu 18672 NR_027713 283102 Hs.689472 NR_027713 ENSG00000213538 KRT8P41 - keratin 8 pseudogene 41 pseudo 376233 chr18 2430194 2431630 + 702.747 NA Intergenic Intergenic 140593 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 435089 chr4 55532159 55533527 + 702.747 NA intron (NM_004898, intron 1 of 22) AluJr4|SINE|Alu 13089 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding 318608 chr11 34412737 34413730 + 702.747 NA Intergenic Intergenic -25701 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding 232961-4 chr5 92507461 92508271 + 702.747 NA Intergenic L1P4|LINE|L1 1063477 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 343731 chr1 112103560 112104882 + 702.747 NA Intergenic (TATAT)n|Simple_repeat|Simple_repeat 113685 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 581084 chr19 24382849 24384526 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -220240 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 194485-5 chr6 41395857 41396384 + 702.747 NA Intergenic L3|LINE|CR1 60512 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding 391957 chr7 50245249 50246494 + 702.747 NA Intergenic Intergenic -58193 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 421121 chr19 52415679 52417388 + 702.747 NA exon (NM_032423, exon 7 of 7) exon (NM_032423, exon 7 of 7) -12615 NM_001351679 147658 Hs.447583 NM_182512 ENSG00000198633 ZNF534 KRBO3 zinc finger protein 534 protein-coding 320101 chr17 47373007 47374152 + 702.747 NA intron (NM_001195192, intron 9 of 21) L1M3e|LINE|L1 49624 NM_152347 124989 Hs.463303 NM_152347 ENSG00000178852 EFCAB13 C17orf57 EF-hand calcium binding domain 13 protein-coding 448001 chr8 124980219 124981339 + 702.747 NA Intergenic Intergenic 7484 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding 417783 chr16 81347982 81349773 + 702.747 NA intron (NM_022041, intron 1 of 10) HAL1|LINE|L1 33911 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding 254043 chr22 34987506 34988335 + 702.747 NA intron (NR_138042, intron 1 of 4) L2a|LINE|L2 9996 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 236386 chr19 24336450 24337260 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -173408 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 208452-7 chr9 31624802 31625633 + 702.747 NA Intergenic Intergenic -243727 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 250968-2 chr9 96739492 96740160 + 702.747 NA Intergenic Intergenic 14005 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo 215919-5 chr5 113365206 113365980 + 702.747 NA intron (NM_001085377, intron 2 of 18) MSTA-int|LTR|ERVL-MaLR 69396 NM_032028 83942 Hs.519507 NM_032028 ENSG00000212122 TSSK1B FKSG81|SPOGA4|STK22D|TSK1|TSSK1 testis specific serine kinase 1B protein-coding 286721 chr17 63305400 63306480 + 702.747 NA intron (NM_025185, intron 8 of 25) intron (NM_025185, intron 8 of 25) 134327 NM_001330421 1534 Hs.355264 NM_001915 ENSG00000008283 CYB561 CYB561A1|FRRS2|ORTHYP2 cytochrome b561 protein-coding 308155 chr1 40484913 40486294 + 702.747 NA intron (NM_001320178, intron 3 of 5) L1MEf|LINE|L1 8313 NM_001320178 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding 331433 chr17 34696403 34697587 + 702.747 NA Intergenic L1MEd|LINE|L1 116246 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding 342413 chr22 48385922 48386980 + 702.747 NA Intergenic L1PA16|LINE|L1 -103102 NM_001082967 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding 747196 chr8 142308835 142311252 + 702.747 NA intron (NM_001366903, intron 9 of 9) L1ME3|LINE|L1 93139 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 321155 chr1 194556111 194557368 + 702.747 NA Intergenic Intergenic 1251994 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 233751-4 chr2 89836016 89836910 + 702.747 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -198556 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 1.05394e+06 chr14 72758319 72761398 + 702.747 NA intron (NM_001280544, intron 2 of 9) L1ME1|LINE|L1 132791 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 178322-12 chr9 137938085 137938678 + 702.747 NA intron (NM_001243812, intron 6 of 45) L1PB1|LINE|L1 8679 NR_132977 105376331 NR_132977 LOC105376331 - uncharacterized LOC105376331 ncRNA 261510-3 chr8 36528495 36529283 + 702.747 NA Intergenic L2c|LINE|L2 -255485 NR_134267 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding 317202-2 chr2 130943198 130944231 + 702.747 NA intron (NM_001367493, intron 3 of 13) L1MEf|LINE|L1 106800 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding 212844-5 chr19 27701773 27702511 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -91289 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 311756 chr11 114586596 114587630 + 702.747 NA intron (NM_017678, intron 2 of 5) HUERS-P3-int|LTR|ERV1 8673 NM_001077639 54827 Hs.179100 NM_017678 ENSG00000137634 NXPE4 C11orf33|FAM55D neurexophilin and PC-esterase domain family member 4 protein-coding 460387 chr15 81600839 81602667 + 702.747 NA Intergenic L1MEg|LINE|L1 -227540 NM_001080532 342125 Hs.253489 NM_181841 ENSG00000188869 TMC3 - transmembrane channel like 3 protein-coding 266780-2 chr7 45558982 45559910 + 702.747 NA Intergenic LTR8B|LTR|ERV1 -14694 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding 288126 chr10 5164574 5165849 + 702.747 NA intron (NR_027916, intron 1 of 7) LTR25-int|LTR|ERV1 19976 NR_027916 340811 Hs.282513 NM_001007536 ENSG00000264006 AKR1C8P AKR1CL1 aldo-keto reductase family 1 member C8, pseudogene pseudo 285403 chr14 60548449 60549736 + 702.747 NA Intergenic L1MA5A|LINE|L1 39946 NM_007374 4990 Hs.194756 NM_007374 ENSG00000184302 SIX6 MCOPCT2|ODRMD|OPTX2|Six9 SIX homeobox 6 protein-coding 260543-2 chrY 56831083 56831976 + 702.747 NA Intergenic AluY|SINE|Alu -122726 NM_005840 10251 Hs.381912 NM_005840 ENSG00000168939 SPRY3 spry-3 sprouty RTK signaling antagonist 3 protein-coding 217939-2 chr4 73293579 73294180 + 702.747 NA Intergenic MER4B-int|LTR|ERV1 -35081 NM_198889 26057 Hs.601206 NM_015574 ENSG00000132466 ANKRD17 GTAR|MASK2|NY-BR-16 ankyrin repeat domain 17 protein-coding 304202 chr16 50415918 50416935 + 702.747 NA Intergenic L1MB4|LINE|L1 -21293 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA 296208-3 chr5 3370677 3371646 + 702.747 NA Intergenic L1MA6|LINE|L1 -81655 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA 199756-2 chr3 194534000 194534587 + 702.747 NA Intergenic HAL1|LINE|L1 47153 NR_033929 401106 Hs.407087 NR_033929 LINC00884 - long intergenic non-protein coding RNA 884 ncRNA 484457 chr4 76326194 76327979 + 702.747 NA intron (NM_001042784, intron 21 of 23) L1MEg|LINE|L1 21060 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding 192816-2 chr6 121563218 121563717 + 702.747 NA Intergenic Charlie11|DNA|hAT-Charlie 127821 NM_000165 2697 Hs.74471 NM_000165 ENSG00000152661 GJA1 AVSD3|CMDR|CX43|EKVP|EKVP3|GJAL|HLHS1|HSS|ODDD|PPKCA gap junction protein alpha 1 protein-coding 222683-2 chr2 44735782 44736709 + 702.747 NA intron (NM_024766, intron 7 of 10) L1MEc|LINE|L1 202643 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA 183241-9 chr8 101570293 101570942 + 702.747 NA intron (NM_024915, intron 5 of 15) intron (NM_024915, intron 5 of 15) 78178 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding 235596-4 chr4 77554292 77555195 + 702.747 NA intron (NM_006419, intron 1 of 4) L1ME1|LINE|L1 42990 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding 308506-3 chr6 73902127 73902813 + 702.747 NA Intergenic L1M2|LINE|L1 -166981 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 278112-2 chr12 37967820 37968632 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -348548 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 246576-2 chr18 22651938 22652703 + 702.747 NA Intergenic L1MB7|LINE|L1 134517 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 327129 chr1 246984613 246985615 + 702.747 NA TTS (NM_020394) TTS (NM_020394) 22943 NM_001204221 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding 316675 chr1 143253697 143254774 + 702.747 NA Intergenic Intergenic 168357 NR_027354 645166 Hs.744183 NR_027354 LSP1P5 - LSP1 pseudogene 5 pseudo 209594 chr1 40465708 40466376 + 702.747 NA Intergenic Intergenic -11248 NM_198494 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding 230062 chr1 86559056 86559763 + 702.747 NA intron (NM_012128, intron 1 of 13) intron (NM_012128, intron 1 of 13) 12331 NM_012128 22802 Hs.567422 NM_012128 ENSG00000016602 CLCA4 CaCC|CaCC2 chloride channel accessory 4 protein-coding 193695-12 chr8 135281966 135282483 + 702.747 NA intron (NR_120396, intron 1 of 4) intron (NR_120396, intron 1 of 4) 48093 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 688077 chr10 99002986 99005440 + 702.747 NA intron (NM_021828, intron 3 of 11) L1MA8|LINE|L1 -79645 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA 909355 chr19 27613016 27615633 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -179107 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 201337-5 chrUn_KI270757v1 14774 15340 + 702.747 NA NA (AATGG)n|Simple_repeat|Simple_repeat NA NA 349089 chr22 48776647 48777708 + 702.747 NA Intergenic L1M7|LINE|L1 -3118 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA 279342-3 chr4 61185709 61187005 + 702.747 NA Intergenic Intergenic -14873 NM_001371343 299282 chr8 130708188 130709313 + 702.747 NA Intergenic L1ME3Cz|LINE|L1 -265076 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 235508-4 chr4 98767102 98767950 + 702.747 NA Intergenic Charlie25|DNA|hAT-Charlie 108624 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA 318520 chr5 124382016 124382694 + 702.747 NA intron (NR_125774, intron 4 of 5) L1MB3|LINE|L1 56165 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 341711-2 chr8 122412311 122413353 + 702.747 NA Intergenic L2a|LINE|L2 155812 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 253780-2 chr8 117495157 117496022 + 702.747 NA Intergenic L1PA14|LINE|L1 -25124 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 225055-3 chr8 103530256 103531045 + 702.747 NA intron (NM_001348497, intron 1 of 22) L1MEg|LINE|L1 -28740 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA 474618 chr12 14288568 14290254 + 702.747 NA Intergenic MER21C|LTR|ERVL -76221 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 348650 chr22 47893931 47895126 + 702.747 NA Intergenic L1MEg|LINE|L1 262854 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA 211176-3 chr6 39177106 39177861 + 702.747 NA Intergenic HAL1|LINE|L1 51992 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding 814572 chr5 150898763 150902158 + 702.747 NA intron (NM_001172832, intron 2 of 4) intron (NM_001172832, intron 2 of 4) 4523 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 290235 chr16 3418483 3419861 + 702.747 NA Intergenic Tigger1|DNA|TcMar-Tigger 17957 NM_001347868 7727 Hs.155204 NM_003450 ENSG00000103343 ZNF174 ZSCAN8 zinc finger protein 174 protein-coding 290849 chr5 13071524 13072766 + 702.747 NA Intergenic MSTA|LTR|ERVL-MaLR -39259 NR_147005 105374658 NR_147005 LINC02220 - long intergenic non-protein coding RNA 2220 ncRNA 298052 chr19 36875615 36876542 + 702.747 NA intron (NM_001242476, intron 3 of 3) intron (NM_001242476, intron 3 of 3) 24427 NM_001242476 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding 686232 chr5 30286432 30289424 + 702.747 NA Intergenic L1M2|LINE|L1 407368 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 203270-2 chr19 27683736 27684300 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -109413 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 424899 chr2 107642132 107644273 + 702.747 NA Intergenic THE1B|LTR|ERVL-MaLR -110910 NR_126369 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA 185789-3 chr14 66348027 66348634 + 702.747 NA Intergenic L1M3|LINE|L1 -138041 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 263179-4 chr5 46039592 46040923 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -343877 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 198965-2 chr11 54767688 54768211 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 61117 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 534439 chr6 119920938 119923005 + 702.747 NA Intergenic L1M1|LINE|L1 -93208 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA 290147-2 chr4 61184618 61185531 + 702.747 NA Intergenic L1M2c|LINE|L1 -16156 NM_001371343 242360 chr10 59644909 59645902 + 702.747 NA Intergenic L1M2c|LINE|L1 64486 NM_194298 220963 Hs.499709 NM_194298 ENSG00000165449 SLC16A9 C10orf36|MCT9 solute carrier family 16 member 9 protein-coding 226987 chr6 39599703 39600700 + 702.747 NA intron (NM_001289020, intron 6 of 21) intron (NM_001289020, intron 6 of 21) 125207 NM_145027 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding 281714-2 chr5 46291169 46292117 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -595263 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 387126 chr10 55689133 55690740 + 702.747 NA Intergenic L1MA6|LINE|L1 -61994 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 635723 chr8 128995928 128998695 + 702.747 NA Intergenic (TGGAATG)n|Simple_repeat|Simple_repeat -31310 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA 738060 chr7 2025100 2027548 + 702.747 NA intron (NM_001013837, intron 12 of 18) L1MEg|LINE|L1 62728 NR_145797 109623488 NR_145797 SNORA114 - small nucleolar RNA, H/ACA box 114 snoRNA 232609 chr18 1212693 1213270 + 702.747 NA Intergenic L1MA5A|LINE|L1 146648 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 671475 chr4 30422359 30424311 + 702.747 NA Intergenic MIRb|SINE|MIR -297034 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 274862 chr8 124977656 124978664 + 702.747 NA 3' UTR (NM_152412, exon 3 of 3) 3' UTR (NM_152412, exon 3 of 3) 4865 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding 348035-2 chrUn_KI270757v1 66098 67247 + 702.747 NA NA ALR/Alpha|Satellite|centr NA NA 198877-6 chr7 40890264 40890993 + 702.747 NA Intergenic L1M4c|LINE|L1 89311 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 188336-6 chr3 102107090 102107542 + 702.747 NA Intergenic Tigger1|DNA|TcMar-Tigger -56389 NR_135549 101929411 Hs.506540 NR_135549 LOC101929411 - uncharacterized LOC101929411 ncRNA 436142 chr12 79757270 79758645 + 702.747 NA Intergenic L1ME4a|LINE|L1 -66860 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding 309121-3 chr2 67980920 67981804 + 702.747 NA Intergenic L1MEc|LINE|L1 81642 NM_001190263 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding 248509-4 chr5 46255584 46256421 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -559622 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 246049 chr11 31176539 31177438 + 702.747 NA intron (NM_001367979, intron 9 of 38) L1MA6|LINE|L1 -184302 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 743418 chr7 4351508 4354172 + 702.747 NA Intergenic L1MB3|LINE|L1 -218003 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 191323-4 chr8 135139149 135139958 + 702.747 NA Intergenic MLT1A1|LTR|ERVL-MaLR -94578 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 178058-2 chr20 42285064 42285680 + 702.747 NA intron (NM_133170, intron 12 of 31) L3|LINE|CR1 -400111 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 293046 chr7 4511758 4513000 + 702.747 NA Intergenic Intergenic -169916 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 186140-2 chr14 72024687 72025244 + 702.747 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 91438 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 336089-2 chr2 89837967 89839268 + 702.747 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -200710 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 864027 chr19 24372288 24375502 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -210448 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 497193 chr3 184091510 184092905 + 702.747 NA Intergenic L1MEd|LINE|L1 -4857 NM_001256613 285242 Hs.449179 NM_182589 ENSG00000186038 HTR3E 5-HT3-E|5-HT3E|5-HT3c1 5-hydroxytryptamine receptor 3E protein-coding 512478 chr7 62827276 62828971 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 475933 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 219433-2 chr4 57751754 57752341 + 702.747 NA Intergenic Intergenic 326175 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 195012-3 chr19 56587719 56588275 + 702.747 NA Intergenic Intergenic -7299 NM_021216 58491 Hs.301431 NM_021216 ENSG00000197951 ZNF71 EZFIT zinc finger protein 71 protein-coding 215919-3 chr12 38038998 38039800 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -277375 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 202128 chr12 27848653 27849360 + 702.747 NA Intergenic MLT2A2|LTR|ERVL 68773 NM_020782 57542 Hs.505104 NM_020782 ENSG00000087448 KLHL42 Ctb9|KLHDC5 kelch like family member 42 protein-coding 351549 chr2 125891832 125893090 + 702.747 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 225524 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 198877-3 chr14 46458669 46459147 + 702.747 NA intron (NR_102701, intron 5 of 5) L1MA5|LINE|L1 -12451 NR_102699 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 183680 chr11 115056692 115057201 + 702.747 NA Intergenic MLT1A0-int|LTR|ERVL-MaLR -276631 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA 469523 chr11 50558410 50560147 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 150131 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 189039 chr12 1891739 1892396 + 702.747 NA intron (NM_172364, intron 6 of 37).2 L1MA4A|LINE|L1 26585 NM_172364 93589 Hs.13768 NM_172364 ENSG00000151062 CACNA2D4 RCD4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 protein-coding 235508-2 chr1 115277843 115278471 + 702.747 NA Intergenic Intergenic -4877 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA 638885 chr19 27604862 27607050 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -187475 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 269328-3 chr3 78389394 78390052 + 702.747 NA Intergenic THE1C-int|LTR|ERVL-MaLR -340760 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA 242623-2 chr3 188807222 188807908 + 702.747 NA intron (NM_001167672, intron 7 of 9) L1MCc|LINE|L1 118784 NR_029502 407020 NR_029502 ENSG00000207651 MIR28 MIRN28|hsa-mir-28|miR-28 microRNA 28 ncRNA 377902-2 chr5 46281969 46283379 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -586294 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 220136 chr11 63387394 63387871 + 702.747 NA intron (NM_080866, intron 6 of 9) L1M1|LINE|L1 17847 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding 697652 chr11 115446269 115448643 + 702.747 NA intron (NM_001098517, intron 1 of 8) LTR41|LTR|ERVL 50700 NR_135102 105369507 Hs.664155 NR_135102 ENSG00000256315 LOC105369507 - uncharacterized LOC105369507 ncRNA 510809 chr6 157505347 157507259 + 702.747 NA intron (NM_024630, intron 1 of 8) intron (NM_024630, intron 1 of 8) -22829 NR_037463 100500899 NR_037463 ENSG00000266617 MIR3692 - microRNA 3692 ncRNA 203270-5 chr7 52820240 52821167 + 702.747 NA Intergenic L1MA9|LINE|L1 -214930 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 223737-3 chr7 14644135 14644861 + 702.747 NA intron (NM_001350722, intron 13 of 25) L1MA5|LINE|L1 196952 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding 201864-5 chr4 105095688 105096360 + 702.747 NA Intergenic L1M4|LINE|L1 -49851 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 322034-2 chr16 68557978 68559157 + 702.747 NA non-coding (NR_130978, exon 4 of 5) non-coding (NR_130978, exon 4 of 5) 19276 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 198614-3 chr3 115742636 115743292 + 702.747 NA Intergenic Intergenic 119454 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding 178146-7 chr2 213673303 213673792 + 702.747 NA intron (NR_047660, intron 9 of 14) intron (NR_047660, intron 9 of 14) -84520 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA 272578 chr10 52533297 52534089 + 702.747 NA Intergenic MIR|SINE|MIR -63160 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA 251935 chr12 10757060 10757781 + 702.747 NA intron (NR_120463, intron 1 of 6) L2a|LINE|L2 7186 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA 479976 chr19 24380259 24381605 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -217485 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 291025 chr2 134835132 134835894 + 702.747 NA Intergenic L1MEd|LINE|L1 -3103 NM_001307983 130013 Hs.655728 NM_138326 ENSG00000153086 ACMSD - aminocarboxymuconate semialdehyde decarboxylase protein-coding 211702 chr2 49635892 49636417 + 702.747 NA Intergenic L2|LINE|L2 338049 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 308857 chr8 129272961 129273929 + 702.747 NA Intergenic Intergenic -32205 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 779083 chr2 11888283 11890855 + 702.747 NA Intergenic Intergenic -52583 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA 195539-5 chr2 116856654 116857368 + 702.747 NA Intergenic L1PA13|LINE|L1 -957680 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 279166-2 chr3 28097918 28098757 + 702.747 NA Intergenic L1M4b|LINE|L1 -143282 NM_001331187 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding 579590 chr3 13902682 13904741 + 702.747 NA Intergenic L1PA10|LINE|L1 -23640 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding 203270-3 chr6 132177844 132178525 + 702.747 NA Intergenic Intergenic 44206 NR_038981 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA 207047-5 chr2 110910647 110911467 + 702.747 NA intron (NM_001371254, intron 11 of 18) L1MB7|LINE|L1 178484 NM_001142807 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding 290674 chr4 107955013 107956206 + 702.747 NA Intergenic L1MA9|LINE|L1 -23490 NR_125929 101929595 Hs.678014 NR_125929 ENSG00000245293 LOC101929595 - uncharacterized LOC101929595 ncRNA 436230 chr11 105982117 105983579 + 702.747 NA TTS (NM_000829) TTS (NM_000829) 39392 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding 357435 chr5 173587160 173588471 + 702.747 NA Intergenic L1M4|LINE|L1 8181 NR_027108 285593 Hs.409730 NR_027108 ENSG00000253955 LOC285593 - uncharacterized LOC285593 ncRNA 269855 chr17 73673558 73674305 + 702.747 NA Intergenic L1MA4|LINE|L1 -29486 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 179464-5 chr3 122582591 122583115 + 702.747 NA intron (NM_001113523, intron 1 of 11) L1MEc|LINE|L1 5203 NM_001113523 165631 Hs.120250 NM_152615 ENSG00000173200 PARP15 ARTD7|BAL3|pART7 poly(ADP-ribose) polymerase family member 15 protein-coding 230765 chr12 65736351 65736990 + 702.747 NA Intergenic L2a|LINE|L2 -87790 NM_001300919 8091 Hs.505924 NM_003483 ENSG00000149948 HMGA2 BABL|HMGI-C|HMGIC|LIPO|STQTL9 high mobility group AT-hook 2 protein-coding 971723 chr2 95148199 95151615 + 702.747 NA exon (NM_032788, exon 5 of 5) exon (NM_032788, exon 5 of 5) 9678 NM_001318005 84874 Hs.355664 NM_032788 ENSG00000144026 ZNF514 - zinc finger protein 514 protein-coding 226021-5 chr6 37597674 37598402 + 702.747 NA Intergenic L1MEd|LINE|L1 -42616 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA 376497 chr12 33212530 33213707 + 702.747 NA Intergenic L1M1|LINE|L1 226701 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding 266429 chr6 159333321 159334064 + 702.747 NA Intergenic L1MCc|LINE|L1 -49839 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA 251759-2 chr8 126278611 126279183 + 702.747 NA Intergenic Intergenic -46598 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 316060 chrY 11293447 11294320 + 702.747 NA Intergenic (TCCAC)n|Simple_repeat|Simple_repeat 1127707 NR_033667 352887 Hs.546221 NR_033667 ENSG00000206159 GYG2P1 GYG2P glycogenin 2 pseudogene 1 pseudo 207398-3 chr16 4060336 4061070 + 702.747 NA intron (NM_001116, intron 2 of 10) L1M4a2|LINE|L1 55739 NM_001116 115 Hs.391860 NM_001116 ENSG00000162104 ADCY9 AC9|ACIX adenylate cyclase 9 protein-coding 682894 chr8 117390015 117392438 + 702.747 NA Intergenic LTR16A|LTR|ERVL -129487 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 385457 chr20 56031497 56032694 + 702.747 NA Intergenic L1ME3G|LINE|L1 -26576 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding 257205 chr8 99376783 99377594 + 702.747 NA intron (NM_017890, intron 19 of 61) L1MEd|LINE|L1 159542 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA 218203 chr8 99432319 99433157 + 702.747 NA intron (NM_017890, intron 22 of 61) intron (NM_017890, intron 22 of 61) 103992 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA 185174-4 chr8 138451385 138451894 + 702.747 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 45622 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 183505-3 chr13 62617465 62618281 + 702.747 NA Intergenic Intergenic 178819 NR_120404 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA 191674-2 chr14 45933293 45933708 + 702.747 NA Intergenic L1P4|LINE|L1 -130659 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 309297 chr12 37900829 37902089 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -415315 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 545156 chr4 87951 89571 + 702.747 NA TTS (NM_182524) TTS (NM_182524) 35440 NM_182524 152687 Hs.709469 NM_182524 ENSG00000272602 ZNF595 - zinc finger protein 595 protein-coding 197384-3 chr15 46678323 46678810 + 702.747 NA Intergenic Intergenic -505523 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding 207925-3 chr8 134932880 134933675 + 702.747 NA Intergenic Intergenic 83342 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 238583-3 chr8 144980777 144981462 + 702.747 NA intron (NR_023392, intron 4 of 4) L1M4b|LINE|L1 -13746 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 477077 chr15 70997713 70999428 + 702.747 NA intron (NM_017691, intron 11 of 15) L1M4|LINE|L1 106127 NM_001199018 54839 Hs.12692 NM_017691 ENSG00000137821 LRRC49 PGs4 leucine rich repeat containing 49 protein-coding 187370-11 chrX 63404532 63405168 + 702.747 NA Intergenic L1MB3|LINE|L1 -53518 NM_001012968 139886 Hs.612782 NM_001012968 ENSG00000186767 SPIN4 TDRD28 spindlin family member 4 protein-coding 179552-6 chr3 111036471 111037009 + 702.747 NA Intergenic L1MA4A|LINE|L1 33219 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA 425864 chr8 138702430 138703584 + 702.747 NA intron (NM_152888, intron 31 of 64) MIR1_Amn|SINE|MIR -205277 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 276443 chr10 81718524 81719527 + 702.747 NA Intergenic L1ME1|LINE|L1 -156169 NM_001010848 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 209419 chr5 179045184 179046037 + 702.747 NA Intergenic Intergenic -14763 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding 249212 chr7 46779450 46780417 + 702.747 NA Intergenic L1M1|LINE|L1 -82811 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 218466-2 chr19 56856341 56857076 + 702.747 NA Intergenic L2c|LINE|L2 15806 NR_024059 100073347 Hs.467337 NR_024059 ENSG00000268654 MIMT1 LINC00067|MIM1|NCRNA00067 MER1 repeat containing imprinted transcript 1 ncRNA 503342 chr14 66656663 66658226 + 702.747 NA intron (NM_001024218, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 150037 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 228568 chr9 107150912 107151761 + 702.747 NA Intergenic HAL1|LINE|L1 -48348 NR_126029 340512 Hs.432529 NR_126029 ENSG00000230782 LOC340512 - uncharacterized LOC340512 ncRNA 351286 chr10 31505822 31507151 + 702.747 NA intron (NM_001323638, intron 8 of 12) L1MA4A|LINE|L1 -106731 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 325811 chr3 44714826 44716126 + 702.747 NA intron (NM_033210, intron 2 of 3) intron (NM_033210, intron 2 of 3) 2816 NM_001134442 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 728309 chr8 135009638 135012010 + 702.747 NA Intergenic MIRb|SINE|MIR 160889 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 355239 chr1 118578016 118579036 + 702.747 NA Intergenic L1M4|LINE|L1 -393298 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 354624 chr10 112862924 112864326 + 702.747 NA Intergenic THE1B|LTR|ERVL-MaLR 40129 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA 501586 chr17 40763346 40764661 + 702.747 NA Intergenic L1MEd|LINE|L1 8156 NM_181539 353288 Hs.592133 NM_181539 ENSG00000186393 KRT26 CK26|K25|K25IRS2|K26|KRT25B keratin 26 protein-coding 381504 chr14 56970034 56971465 + 702.747 NA Intergenic L1M5|LINE|L1 157591 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA 439393 chr14 71304198 71306206 + 702.747 NA Intergenic L2b|LINE|L2 -15274 NM_001354286 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 321068-2 chr9 71148291 71149208 + 702.747 NA intron (NM_001366143, intron 1 of 25) L1M7|LINE|L1 -27128 NM_001366150 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding 462671 chr10 41883644 41884797 + 702.747 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 483825 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 181924 chr1 220574419 220574921 + 702.747 NA intron (NM_018650, intron 1 of 17) L1MEf|LINE|L1 46487 NM_001286124 4139 Hs.497806 NM_018650 ENSG00000116141 MARK1 MARK|Par-1c|Par1c microtubule affinity regulating kinase 1 protein-coding 639500 chr22 27969571 27971541 + 702.747 NA intron (NR_026963, intron 2 of 4) L1ME2|LINE|L1 -49944 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 323966-2 chr2 31692740 31693463 + 702.747 NA Intergenic HUERS-P3-int|LTR|ERV1 110879 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 618857 chr8 126150612 126152586 + 702.747 NA Intergenic L1PA16|LINE|L1 -173896 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 187106-5 chr7 41904145 41904860 + 702.747 NA Intergenic MLT1A0|LTR|ERVL-MaLR -201412 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding 303850 chr10 131368618 131369547 + 702.747 NA Intergenic L1MEg|LINE|L1 -57361 NM_174937 256536 Hs.126575 NM_174937 ENSG00000176769 TCERG1L - transcription elongation regulator 1 like protein-coding 190708-2 chr10 31236649 31237202 + 702.747 NA intron (NR_134478, intron 1 of 2) L1MA5|LINE|L1 49042 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA 359631 chr17 34748893 34750141 + 702.747 NA Intergenic L1ME1|LINE|L1 168768 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding 290059 chr20 56200459 56201208 + 702.747 NA Intergenic MamGypLTR3|LTR|Gypsy -47899 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding 190532-8 chr3 6048277 6048779 + 702.747 NA Intergenic L1MA8|LINE|L1 756921 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA 257732-2 chr14 32184567 32185503 + 702.747 NA Intergenic Intergenic -17010 NR_104080 101954271 NR_104080 ENSG00000207507 RNU6-9 U6-9 RNA, U6 small nuclear 9 snRNA 231292-2 chr2 79332955 79333796 + 702.747 NA Intergenic L1M6|LINE|L1 167469 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 737884 chr8 136339513 136342499 + 702.747 NA Intergenic L1ME2|LINE|L1 -189792 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 643189 chr10 41717214 41719381 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 649748 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 546034-2 chr5 150896219 150898118 + 702.747 NA intron (NM_052860, intron 5 of 5) intron (NM_052860, intron 5 of 5) 7815 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 185525-7 chrX 45373582 45374135 + 702.747 NA Intergenic L1MA3|LINE|L1 -131530 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA 375003 chr22 19650088 19651191 + 702.747 NA Intergenic L1M4|LINE|L1 -63864 NM_002688 5413 Hs.728762 NM_002688 ENSG00000184702 SEPTIN5 CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1|SEPT5 septin 5 protein-coding 295769-3 chr5 8638950 8640200 + 702.747 NA Intergenic Intergenic 178650 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA 251847-3 chr5 37960163 37960895 + 702.747 NA Intergenic L1MB2|LINE|L1 12038 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA 189830-3 chr10 78651334 78651920 + 702.747 NA Intergenic Intergenic 384285 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 245434-3 chr1 172259816 172260602 + 702.747 NA intron (NR_146559, intron 16 of 20) L1MA4A|LINE|L1 -115374 NR_038397 100628315 Hs.584880 NR_038397 DNM3OS DNM3-AS1|MIR199A2HG DNM3 opposite strand/antisense RNA ncRNA 541642 chr20 58476606 58478597 + 702.747 NA intron (NR_130908, intron 1 of 1) L1MC4a|LINE|L1 37337 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 309736 chr13 93015779 93016946 + 702.747 NA Intergenic L1MEd|LINE|L1 -28979 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA 316324 chr10 78824951 78825981 + 702.747 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 241982 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 315446 chr12 37920919 37922212 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -395209 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 191059-2 chr15 99946821 99947526 + 702.747 NA Intergenic L1MB8|LINE|L1 140150 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo 200019-3 chr5 171766999 171767426 + 702.747 NA Intergenic HAL1M8|LINE|L1 -18660 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding 237616-2 chr12 42725701 42726573 + 702.747 NA Intergenic Intergenic 33921 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA 199141-5 chr5 46145840 46146360 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -449720 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 600760 chr7 20488669 20490660 + 702.747 NA Intergenic L1M2|LINE|L1 -126003 NM_001163941 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding 188336-5 chr20 4772075 4772762 + 702.747 NA Intergenic LOR1a|LTR|ERV1 -31750 NR_024267 149830 Hs.126516 NM_177549 ENSG00000180259 PRNT M8 prion locus lncRNA, testis expressed ncRNA 213196 chr10 43950929 43951597 + 702.747 NA intron (NR_033846, intron 5 of 7) L1MB8|LINE|L1 38861 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 202742 chr12 16105193 16105829 + 702.747 NA Intergenic L1ME1|LINE|L1 172174 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 225230-3 chr16 21014418 21015257 + 702.747 NA intron (NM_001347886, intron 41 of 61) L1MC2|LINE|L1 113575 NR_161432 57149 Hs.745012 NM_020424 ENSG00000102897 LYRM1 A211C6.1 LYR motif containing 1 protein-coding 315182 chr5 150892323 150893309 + 702.747 NA intron (NM_001346557, intron 3 of 3) AluJr|SINE|Alu 12167 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 344610 chr3 177861600 177862524 + 702.747 NA intron (NR_110826, intron 1 of 2) L1M3b|LINE|L1 45197 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA 199141-4 chr20 40343714 40344352 + 702.747 NA Intergenic L1MA9|LINE|L1 339572 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 297701-2 chr2 106698592 106699585 + 702.747 NA Intergenic L1MC5|LINE|L1 186940 NR_136313 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding 291728 chr19 51863206 51864013 + 702.747 NA intron (NM_001370455, intron 5 of 6) L1MC4|LINE|L1 24327 NM_001135590 84765 Hs.723015 NM_032679 ENSG00000161551 ZNF577 - zinc finger protein 577 protein-coding 216710 chr1 96658094 96658816 + 702.747 NA Intergenic Intergenic -63150 NM_021190 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding 618593 chr2 101671282 101673210 + 702.747 NA Intergenic HAL1ME|LINE|L1 -25457 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding 197033-4 chr3 36375433 36375984 + 702.747 NA Intergenic Intergenic -4779 NM_001292049 6769 Hs.56045 NM_003149 ENSG00000144681 STAC STAC1 SH3 and cysteine rich domain protein-coding 184998 chr1 95521189 95521805 + 702.747 NA Intergenic L1M4|LINE|L1 11381 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA 322737 chr7 5059579 5060522 + 702.747 NA intron (NM_001204513, intron 4 of 5) intron (NM_001204513, intron 4 of 5) -12010 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 184822-8 chr8 99375925 99376571 + 702.747 NA intron (NM_017890, intron 19 of 61) intron (NM_017890, intron 19 of 61) 160482 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA 252462-2 chr4 85025033 85026066 + 702.747 NA Intergenic AluJr|SINE|Alu 58065 NR_152782 404201 Hs.46730 NM_205857 ENSG00000180769 WDFY3-AS2 C4orf12|FBI4|NCRNA00247 WDFY3 antisense RNA 2 ncRNA 384666 chr19 43868274 43869470 + 702.747 NA Intergenic Charlie5|DNA|hAT-Charlie 11264 NM_001033719 342908 Hs.76561 NM_001033719 ENSG00000176222 ZNF404 - zinc finger protein 404 protein-coding 485159 chr2 15111361 15113277 + 702.747 NA Intergenic HAL1M8|LINE|L1 449015 NM_015909 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 222947 chr6 159334852 159335394 + 702.747 NA Intergenic L1MCc|LINE|L1 -48408 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA 410229 chr12 37990407 37991707 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -325717 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 277585 chr2 68105874 68106581 + 702.747 NA Intergenic L1ME3F|LINE|L1 -43223 NM_006333 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding 397052-2 chr17 72793013 72794774 + 702.747 NA intron (NM_001352692, intron 6 of 9) intron (NM_001352692, intron 6 of 9) -153421 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA 325196-2 chr22 48570215 48571190 + 702.747 NA intron (NM_001082967, intron 1 of 3) intron (NM_001082967, intron 1 of 3) -5638 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding 235684 chr10 31626244 31627069 + 702.747 NA Intergenic L1MC5|LINE|L1 -226901 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 433420 chr1 114988943 114990741 + 702.747 NA intron (NR_104211, intron 31 of 32) L1M4c|LINE|L1 -39982 NM_000549 7252 Hs.406687 NM_000549 ENSG00000134200 TSHB TSH-B|TSH-BETA thyroid stimulating hormone subunit beta protein-coding 201776-2 chr22 35183824 35184687 + 702.747 NA intron (NR_126356, intron 2 of 5) L1MEf|LINE|L1 46801 NR_126356 104310353 Hs.581009 NR_126356 ENSG00000233080 LINC01399 - long intergenic non-protein coding RNA 1399 ncRNA 189917-4 chr20 43812240 43812869 + 702.747 NA Intergenic MLT1C|LTR|ERVL-MaLR -82164 NR_134577 105372626 Hs.130555 NR_134577 ENSG00000233277 LINC01728 - long intergenic non-protein coding RNA 1728 ncRNA 322561 chr12 26761731 26762738 + 702.747 NA intron (NM_002223, intron 2 of 56) L1M2|LINE|L1 70960 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding 257645 chr10 71197579 71198335 + 702.747 NA Intergenic MER63A|DNA|hAT-Blackjack -14613 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding 197560-4 chr4 97735334 97736159 + 702.747 NA intron (NM_174952, intron 9 of 10) (AT)n|Simple_repeat|Simple_repeat 368820 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA 254570 chr11 114631828 114632733 + 702.747 NA Intergenic (ATAAT)n|Simple_repeat|Simple_repeat -36494 NM_017678 54827 Hs.179100 NM_017678 ENSG00000137634 NXPE4 C11orf33|FAM55D neurexophilin and PC-esterase domain family member 4 protein-coding 1083723 chr10 76272518 76277047 + 702.747 NA intron (NM_001305581, intron 5 of 6) HAL1b|LINE|L1 492021 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 264233 chr12 40579689 40580440 + 702.747 NA Intergenic LTR27D|LTR|ERV1 -112375 NM_001843 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding 337143 chr2 34837520 34838592 + 702.747 NA Intergenic L1MA4|LINE|L1 160499 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 251496 chr11 54963831 54964807 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 257487 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 189390 chr2 65675558 65676046 + 702.747 NA Intergenic L1MEg|LINE|L1 -243203 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding 481294 chr12 34417806 34419362 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 396088 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 1.31528e+06 chr4 30412761 30416056 + 702.747 NA Intergenic L1MB5|LINE|L1 -305961 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 410580 chr17 61452886 61454270 + 702.747 NA intron (NM_001321120, intron 1 of 8) intron (NM_001321120, intron 1 of 8) 1156 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding 414796 chr19 27563711 27564992 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -229080 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 251144-4 chr7 6677917 6678575 + 702.747 NA Intergenic Intergenic 28701 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 424108 chr2 61674524 61676178 + 702.747 NA Intergenic LOR1a|LTR|ERV1 -136995 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding 271348 chr9 11402334 11403351 + 702.747 NA Intergenic L1MC1|LINE|L1 789636 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA 299985 chr12 16310072 16311231 + 702.747 NA Intergenic L2a|LINE|L2 -32966 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 340042 chr2 71910089 71911641 + 702.747 NA Intergenic L1MEc|LINE|L1 236997 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 178761-4 chr5 141400390 141400923 + 702.747 NA TTS (NM_032099) TTS (NM_032099) -2297 NM_018921 56107 Hs.368160 NM_018921 ENSG00000261934 PCDHGA9 PCDH-GAMMA-A9 protocadherin gamma subfamily A, 9 protein-coding 244732 chr16 35972798 35973647 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 226670 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA 479449 chr11 114530879 114533204 + 702.747 NA intron (NM_152315, intron 2 of 5) MER5B|DNA|hAT-Charlie 27840 NM_001367953 120400 Hs.550126 NM_152315 ENSG00000095110 NXPE1 FAM55A neurexophilin and PC-esterase domain family member 1 protein-coding 278288-2 chr5 125705418 125706451 + 702.747 NA Intergenic L1M4|LINE|L1 212673 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA 599004 chr2 75257015 75259092 + 702.747 NA Intergenic L1MB7|LINE|L1 -58533 NM_015727 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding 297965 chr7 50221384 50222310 + 702.747 NA Intergenic Intergenic -82217 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 201337-2 chr5 133721179 133721715 + 702.747 NA Intergenic L1M2a|LINE|L1 -108906 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding 363584 chr12 37842867 37844023 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -473329 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 207486-2 chr5 46018964 46019519 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -322861 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 423493 chr10 66651907 66653719 + 702.747 NA intron (NM_001127384, intron 9 of 17) L1MA8|LINE|L1 -273223 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 281362 chr10 41719856 41721133 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 647551 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 196154-6 chr7 40908537 40908963 + 702.747 NA Intergenic Intergenic 71189 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 483051 chr18 6697392 6698979 + 702.747 NA Intergenic L1ME1|LINE|L1 -31531 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding 223825 chr12 34558252 34559031 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 536145 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 564745 chr8 87786191 87788076 + 702.747 NA Intergenic Intergenic 86882 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 230852 chr4 63329674 63330376 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 1079425 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 399775-2 chr7 64524105 64525664 + 702.747 NA 3' UTR (NM_001130022, exon 4 of 4) 3' UTR (NM_001130022, exon 4 of 4) 38187 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding 260280-2 chr8 118643497 118644504 + 702.747 NA intron (NR_038210, intron 2 of 4) MLT1D|LTR|ERVL-MaLR -22037 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding 518012 chr19 37611919 37613545 + 702.747 NA exon (NM_001172226, exon 4 of 4) exon (NM_001172226, exon 4 of 4) 17856 NM_001172226 163255 Hs.728927 NM_152606 ENSG00000171817 ZNF540 Nbla10512 zinc finger protein 540 protein-coding 299195 chr21 18852935 18854013 + 702.747 NA Intergenic L1MDa|LINE|L1 -93662 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA 309648 chr8 126286199 126287123 + 702.747 NA Intergenic Intergenic -38834 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 265814-3 chr7 54410731 54411538 + 702.747 NA Intergenic L1MA9|LINE|L1 80437 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 228481-2 chr19 37731407 37732225 + 702.747 NA Intergenic AluSz|SINE|Alu -12055 NM_032689 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding 254219 chr12 34496805 34497628 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 474720 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 729891 chr19 27592488 27595000 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -199687 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 278112-5 chr9 40907710 40908533 + 702.747 NA Intergenic CER|Satellite|Satellite 20971 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA 557981 chr2 31452593 31454686 + 702.747 NA Intergenic MER57-int|LTR|ERV1 -38897 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding 656893 chr5 63859636 63862005 + 702.747 NA Intergenic L1M4|LINE|L1 101472 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding 932457 chr8 89110206 89113056 + 702.747 NA Intergenic L1MA9|LINE|L1 646080 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 243765-2 chr11 30672070 30673281 + 702.747 NA Intergenic L2c|LINE|L2 -86322 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding 243765 chr10 30994195 30994865 + 702.747 NA intron (NM_001143766, intron 1 of 7) MSTC|LTR|ERVL-MaLR 4987 NM_001143769 220929 Hs.660642 NM_182755 ENSG00000183621 ZNF438 bA330O11.1 zinc finger protein 438 protein-coding 698443 chr14 68615808 68617632 + 702.747 NA intron (NM_001321818, intron 10 of 10) L1MEc|LINE|L1 12067 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 407330 chr7 6664888 6666568 + 702.747 NA Intergenic Intergenic 28410 NM_001278559 100131017 Hs.112668 NM_001278559 ENSG00000205903 ZNF316 MZF-3 zinc finger protein 316 protein-coding 437724 chr19 24349120 24350556 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -186391 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 305958-2 chr22 27737406 27738407 + 702.747 NA Intergenic L1ME2|LINE|L1 63850 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding 259050 chr2 62371735 62372771 + 702.747 NA Intergenic L1ME3E|LINE|L1 133942 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding 423932 chr2 143064597 143066011 + 702.747 NA Intergenic L1M4|LINE|L1 -64115 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding 283646 chr11 45707345 45708669 + 702.747 NA Intergenic L2c|LINE|L2 -14301 NR_047569 100507384 Hs.259426 NR_047569 ENSG00000254519 LOC100507384 - uncharacterized LOC100507384 ncRNA 395734 chr5 5742259 5743496 + 702.747 NA Intergenic L1MC3|LINE|L1 320200 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding 471368 chr2 127179955 127181742 + 702.747 NA Intergenic L1MC5|LINE|L1 24919 NM_001001665 339761 Hs.407639 NM_001001665 ENSG00000186684 CYP27C1 - cytochrome P450 family 27 subfamily C member 1 protein-coding 223386-6 chr8 91681366 91682023 + 702.747 NA Intergenic MLT1C|LTR|ERVL-MaLR 335986 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 286896 chr5 40163638 40164680 + 702.747 NA Intergenic Intergenic 111868 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 183505-11 chr8 112784720 112785299 + 702.747 NA intron (NM_001363185, intron 11 of 66) L1MA3|LINE|L1 141516 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 296208 chr10 70030871 70031599 + 702.747 NA Intergenic L1MEc|LINE|L1 -21611 NM_018649 55506 Hs.499953 NM_018649 ENSG00000099284 H2AFY2 macroH2A2 H2A histone family member Y2 protein-coding 274598 chr18 13927676 13929038 + 702.747 NA Intergenic Intergenic -12650 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding 346191-2 chr5 150894538 150895788 + 702.747 NA 3' UTR (NM_001172832, exon 5 of 5) 3' UTR (NM_001172832, exon 5 of 5) 9820 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 312020 chr11 48669072 48670077 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr 180781 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding 209682-2 chr12 37828429 37829249 + 702.747 NA Intergenic ALR/Alpha|Satellite|centr -487935 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 331784 chr17 73677062 73677985 + 702.747 NA Intergenic L1ME2|LINE|L1 -33078 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 633526 chr11 112860540 112862440 + 702.747 NA Intergenic L1MEi|LINE|L1 -99930 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding 180606-6 chr8 88617638 88618133 + 702.747 NA Intergenic Intergenic -290402 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 325108 chr2 54366502 54367320 + 702.747 NA Intergenic MIR|SINE|MIR 36027 NM_001369403 129852 Hs.732626 NM_173486 ENSG00000177994 C2orf73 - chromosome 2 open reading frame 73 protein-coding 586003 chr10 82429764 82432071 + 702.747 NA intron (NR_163253, intron 3 of 10) L1M4|LINE|L1 -197997 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 296120 chr10 32770314 32771444 + 702.747 NA intron (NM_001321115, intron 29 of 43) L1PBa|LINE|L1 130593 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA 607173 chr22 49696505 49698528 + 702.747 NA Intergenic L1MEd|LINE|L1 -39997 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding 482524 chr9 75384623 75386605 + 702.747 NA Intergenic L1MA9|LINE|L1 297100 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding 285315-3 chr22 33228259 33229033 + 702.747 NA Intergenic Intergenic 120117 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA 199141 chr13 58428113 58428799 + 702.747 NA Intergenic Intergenic -195339 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA 430696 chr2 105664824 105666236 + 702.747 NA Intergenic L1ME2|LINE|L1 -54971 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA 950992 chr12 40076484 40080379 + 702.747 NA intron (NM_052885, intron 1 of 9) L1PA15|LINE|L1 27650 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding 647933 chr3 118029039 118031047 + 702.747 NA Intergenic L1MA1|LINE|L1 -339118 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 182802-5 chr7 3109878 3110364 + 702.747 NA Intergenic AluJo|SINE|Alu 48452 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA 348035 chr10 42371452 42372935 + 702.747 NA Intergenic MER57A-int|LTR|ERV1 -4148 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 259226 chr10 107789947 107790825 + 702.747 NA Intergenic L1MCc|LINE|L1 278907 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA 241130-2 chr10 43637211 43638009 + 702.747 NA intron (NR_038867, intron 1 of 4) (ATTTTAT)n|Simple_repeat|Simple_repeat -6262 NR_047557 414197 Hs.605832 NR_047557 ENSG00000226245 ZNF32-AS1 ZNF32OS1|bA402L1.8 ZNF32 antisense RNA 1 ncRNA 385017 chr8 142052789 142054283 + 702.747 NA Intergenic L1MD|LINE|L1 -122803 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA 183241-7 chr7 21004856 21005347 + 702.747 NA intron (NR_126381, intron 2 of 5) L1MA4|LINE|L1 169670 NR_126381 104355138 Hs.650722 NR_126381 ENSG00000232790 LINC01162 - long intergenic non-protein coding RNA 1162 ncRNA 187897-3 chr2 55754454 55755025 + 702.747 NA Intergenic L1ME3B|LINE|L1 -60895 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding 458367 chr7 4500854 4502512 + 702.747 NA Intergenic L1MD|LINE|L1 -180612 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 331960-2 chr8 144931428 144932500 + 702.747 NA exon (NM_001029976, exon 4 of 4) exon (NM_001029976, exon 4 of 4) 18916 NM_001029976 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding 194749-2 chr12 125521914 125522344 + 702.747 NA intron (NM_052907, intron 4 of 8) intron (NM_052907, intron 4 of 8) -100323 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding 489990 chr22 34787212 34788806 + 702.747 NA intron (NR_138042, intron 3 of 4) L1ME4c|LINE|L1 209907 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 333893 chr19 33981718 33982704 + 702.747 NA Intergenic L1MDa|LINE|L1 185341 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding 360949 chr6 125460227 125461864 + 702.747 NA Intergenic L1MCa|LINE|L1 -159078 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding 448528 chr19 37130491 37131943 + 702.747 NA TTS (NM_001329522) TTS (NM_001329522) 41219 NM_199126 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding 428061 chr2 108010946 108012267 + 702.747 NA 3' UTR (NM_001305007, exon 9 of 9) 3' UTR (NM_001305007, exon 9 of 9) 25082 NM_001305007 60482 Hs.287758 NM_021815 ENSG00000115665 SLC5A7 CHT|CHT1|CMS20|HMN7A solute carrier family 5 member 7 protein-coding 393363 chr17 57687062 57688418 + 702.747 NA Intergenic L1MEj|LINE|L1 57559 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding 188600-6 chr8 121782747 121783428 + 702.747 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -141647 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 396876 chr3 31027366 31028483 + 702.747 NA Intergenic Intergenic -133263 NM_207359 339896 Hs.657052 NM_207359 ENSG00000144644 GADL1 ADC|CSADC|HuADC|HuCSADC glutamate decarboxylase like 1 protein-coding 221277-6 chr7 45903719 45904502 + 702.747 NA Intergenic L1MB8|LINE|L1 15622 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding 248245 chr1 217377327 217378124 + 702.747 NA Intergenic HAL1|LINE|L1 -240023 NM_001243510 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding 251144 chr15 62208822 62209499 + 702.747 NA Intergenic LTR27D|LTR|ERV1 -5842 NR_148210 107984784 Hs.591131 NR_148210 ENSG00000259697 LOC107984784 - uncharacterized LOC107984784 ncRNA 273456-2 chr20 48755022 48756031 + 702.747 NA intron (NM_020820, intron 1 of 39) MLT1J|LTR|ERVL-MaLR 72473 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding 514938 chr10 73315827 73317504 + 702.747 NA intron (NM_001367801, intron 10 of 27) L1ME1|LINE|L1 42089 NM_001350933 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding 860338 chr20 56032995 56035864 + 702.747 NA Intergenic Intergenic -28910 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding 278288 chr12 133117140 133118067 + 702.747 NA Intergenic Intergenic 12870 NM_001277291 101060200 Hs.614816 NM_001277291 ENSG00000214029 ZNF891 - zinc finger protein 891 protein-coding 414972 chr11 42274926 42276211 + 702.747 NA Intergenic L1M2|LINE|L1 -21878 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA 326690 chr2 150900991 150902313 + 702.747 NA Intergenic Intergenic 272755 NR_110246 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA 462232 chr4 64952690 64954389 + 702.747 NA intron (NR_033976, intron 2 of 6) MER61A|LTR|ERV1 50961 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA 246664 chr1 29993573 29994831 + 702.747 NA Intergenic L1MEf|LINE|L1 43410 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA 208365 chr11 13201658 13202199 + 702.747 NA Intergenic L1PA16|LINE|L1 -74724 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding 267483 chr6 84433687 84434578 + 702.747 NA intron (NR_132100, intron 4 of 4) intron (NR_132100, intron 4 of 4) 40797 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA 275653-2 chr12 119047452 119048497 + 702.747 NA intron (NM_194286, intron 1 of 12) intron (NM_194286, intron 1 of 12) 66433 NM_194286 84530 Hs.744964 NM_194286 ENSG00000139767 SRRM4 KIAA1853|MU-MB-2.76|nSR100 serine/arginine repetitive matrix 4 protein-coding 184208-3 chr6 40095254 40095915 + 702.747 NA Intergenic Intergenic -161122 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 287951-4 chr7 14086222 14087427 + 702.747 NA Intergenic Intergenic -95399 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding 280308-2 chr12 133049795 133050935 + 702.747 NA intron (NM_001127372, intron 4 of 4) LTR16C|LTR|ERVL 12783 NM_001289972 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding 235684-2 chr11 50596151 50596788 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 187322 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 887394 chr12 14604450 14607909 + 614.904 NA intron (NR_120465, intron 2 of 5) L1ME1|LINE|L1 -38296 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding 186755-4 chr6 127062357 127062921 + 614.904 NA Intergenic L1M7|LINE|L1 -56032 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding 313425 chr14 46558317 46559618 + 614.904 NA Intergenic MER58A|DNA|hAT-Charlie 87608 NR_102700 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 539534 chr19 37388261 37390383 + 614.904 NA exon (NM_032453, exon 5 of 5) exon (NM_032453, exon 5 of 5) 18223 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding 210473-2 chr2 36123691 36124461 + 614.904 NA Intergenic Intergenic 231494 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA 218642 chr10 10748921 10749465 + 614.904 NA intron (NM_001326317, intron 2 of 14) intron (NM_001326317, intron 2 of 14) 45721 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo 308682 chr7 4497273 4498378 + 614.904 NA Intergenic L1ME3Cz|LINE|L1 -184470 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 238231-2 chr8 89506005 89506752 + 614.904 NA Intergenic L1ME3B|LINE|L1 251333 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 180167-8 chr2 227580928 227581621 + 614.904 NA Intergenic L1MD|LINE|L1 37381 NR_149019 729968 Hs.689550 NR_149019 LOC729968 - spore coat protein SP96 ncRNA 239725-2 chr17 40759787 40760607 + 614.904 NA Intergenic L1MA8|LINE|L1 -4866 NM_181534 147183 Hs.55412 NM_181534 ENSG00000204897 KRT25 ARWH3|KRT24IRS1|KRT25A keratin 25 protein-coding 516079 chr21 29224396 29226426 + 614.904 NA intron (NR_027072, intron 1 of 1) HAL1b|LINE|L1 31917 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA 267747-3 chr4 64229832 64230740 + 614.904 NA Intergenic LTR25-int|LTR|ERV1 179164 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 209155-2 chr5 45927281 45928175 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -231348 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 195451-3 chr20 42097186 42097922 + 614.904 NA intron (NM_133170, intron 28 of 31) L2c|LINE|L2 -479177 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 196242-4 chr20 56998613 56999304 + 614.904 NA Intergenic MER113|DNA|hAT-Charlie -214738 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA 232258-3 chr15 93683196 93684252 + 614.904 NA Intergenic Intergenic -172836 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA 533912 chr19 37667593 37669480 + 614.904 NA 3' UTR (NM_152605, exon 4 of 4) 3' UTR (NM_152605, exon 4 of 4) -12275 NM_001320668 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 232258-2 chr14 59642237 59643047 + 614.904 NA intron (NM_021136, intron 3 of 8) L1MEg|LINE|L1 4378 NR_049851 100847088 NR_049851 ENSG00000263629 MIR5586 - microRNA 5586 ncRNA 221277-7 chr9 108043712 108044388 + 614.904 NA Intergenic Intergenic -554281 NM_004235 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding 195627-12 chr8 139094980 139095821 + 614.904 NA Intergenic Intergenic -181359 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 211527-2 chr16 5627621 5628455 + 614.904 NA Intergenic Intergenic -4429 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA 212142 chr10 41838474 41839144 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 529236 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 220663-3 chr21 28180611 28181522 + 614.904 NA intron (NR_126012, intron 3 of 5) L1MD|LINE|L1 47601 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 314040 chr3 20611377 20612361 + 614.904 NA Intergenic L1M4c|LINE|L1 269401 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA 205817-7 chr8 115791513 115792362 + 614.904 NA Intergenic L1M1|LINE|L1 -122962 NM_001282903 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 672178 chr12 133119378 133122557 + 614.904 NA exon (NM_001277291, exon 2 of 2) exon (NM_001277291, exon 2 of 2) 9506 NM_001277291 101060200 Hs.614816 NM_001277291 ENSG00000214029 ZNF891 - zinc finger protein 891 protein-coding 192992-4 chr5 144061421 144062303 + 614.904 NA Intergenic L1MA10|LINE|L1 108797 NM_001024947 81555 Hs.372050 NM_030799 ENSG00000145817 YIPF5 FinGER5|SB140|SMAP-5|SMAP5|YIP1A Yip1 domain family member 5 protein-coding 479800 chr15 58024851 58026611 + 614.904 NA intron (NM_170696, intron 1 of 11) MSTB|LTR|ERVL-MaLR -11708 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding 213987 chr10 123404220 123405171 + 614.904 NA Intergenic L1MEd|LINE|L1 250293 NM_004725 9184 Hs.418533 NM_004725 ENSG00000154473 BUB3 BUB3L|hBUB3 BUB3 mitotic checkpoint protein protein-coding 304289-2 chr7 62880860 62882256 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 422498 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 214865 chr5 52489331 52490179 + 614.904 NA Intergenic L1ME4b|LINE|L1 -298161 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding 184120-6 chr6 40114181 40114788 + 614.904 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -180022 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 233048-2 chr9 30565367 30566253 + 614.904 NA Intergenic (ATT)n|Simple_repeat|Simple_repeat -157356 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA 592504 chr14 62434129 62436412 + 614.904 NA Intergenic L1MEc|LINE|L1 -295297 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 237880-2 chr6 40628233 40629118 + 614.904 NA Intergenic Intergenic -41311 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 238934-2 chr10 78126407 78127182 + 614.904 NA Intergenic L1ME4a|LINE|L1 92931 NM_001142285 6229 Hs.280130 NM_001026 ENSG00000138326 RPS24 DBA3|S24|eS24 ribosomal protein S24 protein-coding 229886 chr10 32753501 32754400 + 614.904 NA intron (NM_001321115, intron 29 of 43) intron (NM_001321115, intron 29 of 43) 147522 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA 215831-4 chr5 37957049 37957649 + 614.904 NA Intergenic L1MEc|LINE|L1 8858 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA 287863 chr2 132466350 132467299 + 614.904 NA intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 33113 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA 195803-2 chr12 16229847 16230655 + 614.904 NA intron (NM_001170798, intron 5 of 8) intron (NM_001170798, intron 5 of 8) 47434 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 295593 chr2 79272085 79273113 + 614.904 NA Intergenic L2a|LINE|L2 -112846 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 214953-2 chr7 34697263 34698096 + 614.904 NA intron (NM_001300934, intron 2 of 6) MER2|DNA|TcMar-Tigger 39440 NM_001300935 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 488146 chr22 22996291 22998275 + 614.904 NA Intergenic L1M2|LINE|L1 -73236 NM_002073 2781 Hs.584760 NM_002073 ENSG00000128266 GNAZ gz-alpha G protein subunit alpha z protein-coding 205114-2 chr14 62520659 62521403 + 614.904 NA Intergenic L1PA13|LINE|L1 -381058 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 202742-3 chr2 79294134 79294809 + 614.904 NA Intergenic MLT1A|LTR|ERVL-MaLR -134718 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 220487 chr12 37982740 37983732 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -333538 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 444576 chr8 129277486 129279624 + 614.904 NA Intergenic L1ME3A|LINE|L1 -37315 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 208277-5 chr8 125940369 125940942 + 614.904 NA TTS (NR_038446) TTS (NR_038446) 10542 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 200459-4 chr10 58539988 58540669 + 614.904 NA intron (NM_001080512, intron 1 of 20) L1MB2|LINE|L1 27456 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 476990 chr10 78325701 78327530 + 614.904 NA Intergenic L1MA4A|LINE|L1 59273 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 216183 chr10 76038390 76039425 + 614.904 NA intron (NM_001305581, intron 3 of 6) MLT1H2|LTR|ERVL-MaLR 256146 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 212230-3 chr7 34782596 34783183 + 614.904 NA intron (NM_207172, intron 3 of 8) L1M4|LINE|L1 -24617 NR_033665 404744 Hs.487951 NM_207283 ENSG00000197085 NPSR1-AS1 AAA1 NPSR1 antisense RNA 1 ncRNA 270294-3 chr20 53447936 53449041 + 614.904 NA intron (NM_173485, intron 2 of 2) LOR1a|LTR|ERV1 -104282 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA 263267-2 chr8 139219958 139221307 + 614.904 NA Intergenic L1MC3|LINE|L1 -306591 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 363144 chr15 58270560 58271666 + 614.904 NA Intergenic L1MEi|LINE|L1 132732 NM_020980 366 Hs.104624 NM_020980 ENSG00000103569 AQP9 AQP-9|HsT17287|SSC1|T17287 aquaporin 9 protein-coding 728046 chr8 144612649 144614945 + 614.904 NA promoter-TSS (NM_001308207) promoter-TSS (NM_001308207) -294 NM_001308207 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding 250705 chr2 98970229 98970975 + 614.904 NA Intergenic L1MA4|LINE|L1 -34377 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding 205202-5 chr16 51394003 51394963 + 614.904 NA intron (NR_039672, intron 6 of 6) MER53|DNA|hAT -243211 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding 228041 chr4 43550541 43551192 + 614.904 NA Intergenic L1MA1|LINE|L1 -58323 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 211966-3 chr3 68708457 68709068 + 614.904 NA Intergenic L1M2|LINE|L1 208125 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA 478483 chr2 104262714 104264302 + 614.904 NA Intergenic L1MA9|LINE|L1 144824 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 248158 chr15 69924337 69925415 + 614.904 NA Intergenic L1MEd|LINE|L1 89642 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA 180079-3 chr3 2304209 2304735 + 614.904 NA intron (NM_001206955, intron 1 of 23) intron (NM_001206955, intron 1 of 23) 65643 NM_001206955 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding 267659 chr2 222334755 222335762 + 614.904 NA intron (NR_136642, intron 1 of 3) L1M2|LINE|L1 14597 NR_136640 440934 Hs.732732 NR_136638 ENSG00000237732 CT75 - cancer/testis associated transcript 75 ncRNA 425513 chr19 28079763 28081260 + 614.904 NA Intergenic L1MD1|LINE|L1 -286571 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA 269152 chr7 54939463 54940439 + 614.904 NA Intergenic L1ME4a|LINE|L1 -79066 NM_001346941 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding 201073-2 chr2 53556381 53556961 + 614.904 NA Intergenic L1ME3A|LINE|L1 -211112 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding 435703 chr10 8604807 8606918 + 614.904 NA Intergenic L1ME1|LINE|L1 -11471 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA 286282 chr19 56425986 56427355 + 614.904 NA 3' UTR (NM_001159861, exon 5 of 5) 3' UTR (NM_001159861, exon 5 of 5) 22338 NM_152478 147949 Hs.146854 NM_152478 ENSG00000198440 ZNF583 - zinc finger protein 583 protein-coding 185964-3 chr16 50702234 50703265 + 614.904 NA intron (NR_163434, intron 2 of 12) MIRb|SINE|MIR 3369 NM_001293557 64127 Hs.592072 NM_022162 ENSG00000167207 NOD2 ACUG|BLAU|BLAUS|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1|YAOS nucleotide binding oligomerization domain containing 2 protein-coding 191147-2 chr12 37957351 37958062 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -359068 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 268361-2 chr8 140034572 140035452 + 614.904 NA intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 65523 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 300249 chr1 224936806 224937769 + 614.904 NA intron (NM_001349912, intron 1 of 5) L1MA4|LINE|L1 7612 NM_001367479 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding 444312 chr14 72764936 72766612 + 614.904 NA intron (NM_001280544, intron 2 of 9) AluY|SINE|Alu 126875 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 396789 chr10 83527702 83528992 + 614.904 NA Intergenic L1MA4A|LINE|L1 148742 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 202655-3 chr19 51992000 51992885 + 614.904 NA 3' UTR (NM_001321317, exon 4 of 4) 3' UTR (NM_001321317, exon 4 of 4) -5602 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding 294539 chr14 56929843 56930949 + 614.904 NA non-coding (NR_029385, exon 4 of 4) non-coding (NR_029385, exon 4 of 4) 117238 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA 199756-4 chr8 88660528 88661075 + 614.904 NA Intergenic L1MEi|LINE|L1 -333318 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 323703 chr6 156033087 156034431 + 614.904 NA Intergenic L1MEf|LINE|L1 86962 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA 219169 chr1 40459321 40459988 + 614.904 NA intron (NM_001369565, intron 5 of 5) intron (NM_001369565, intron 5 of 5) 9178 NM_023070 65243 Hs.133034 NM_023070 ENSG00000187801 ZFP69B ZKSCAN23B|ZNF643|ZSCAN54B ZFP69 zinc finger protein B protein-coding 278200-2 chr2 120665428 120666404 + 614.904 NA Intergenic Intergenic -69952 NM_001371271 178146-5 chr2 63205916 63206447 + 614.904 NA intron (NR_148705, intron 13 of 16) L1MA2|LINE|L1 -86639 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 241130 chr1 181827999 181828801 + 614.904 NA Intergenic L1M4c|LINE|L1 233312 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding 565184 chr8 87078654 87081413 + 614.904 NA intron (NM_173538, intron 4 of 10) L1ME2|LINE|L1 213618 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 270031 chr2 241025159 241026303 + 614.904 NA intron (NM_001080437, intron 1 of 31) L1MA9|LINE|L1 27113 NM_001080437 25992 Hs.471834 NM_001080437 ENSG00000162804 SNED1 IRE-BP1|SST3|Snep sushi, nidogen and EGF like domains 1 protein-coding 240164 chr18 1864734 1865452 + 614.904 NA Intergenic L1M4|LINE|L1 -505464 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 221453-4 chr9 96828108 96828806 + 614.904 NA intron (NM_001346995, intron 2 of 3) L1MEc|LINE|L1 26057 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 658298 chr12 34646688 34649177 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 625436 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 197735-2 chr9 2309955 2310530 + 614.904 NA Intergenic L1MA2|LINE|L1 151786 NM_001289400 6595 Hs.298990 NM_003070 ENSG00000080503 SMARCA2 BAF190|BRM|NCBRS|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein-coding 369821 chr5 45995737 45996951 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -299964 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 227690-3 chr8 132653422 132654169 + 614.904 NA intron (NR_135912, intron 3 of 11) L1M4|LINE|L1 21750 NM_012472 23639 Hs.591865 NM_012472 ENSG00000129295 LRRC6 CILD19|LRTP|TSLRP leucine rich repeat containing 6 protein-coding 455556 chr7 64714971 64716974 + 614.904 NA Intergenic L1PA17|LINE|L1 36908 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 251320 chr19 27350836 27351731 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -442148 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 322297-2 chr8 89651174 89652475 + 614.904 NA Intergenic L1M2c|LINE|L1 105887 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 235684-4 chr3 45302144 45302984 + 614.904 NA Intergenic L1M4b|LINE|L1 -76277 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding 264233-2 chr19 37590447 37591548 + 614.904 NA intron (NM_016536, intron 1 of 3) L1MC5a|LINE|L1 3749 NM_001321272 51276 Hs.590944 NM_016536 ENSG00000180479 ZNF571 HSPC059 zinc finger protein 571 protein-coding 337758 chr8 136313818 136315084 + 614.904 NA Intergenic Intergenic -216347 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 233576-2 chr8 88934357 88935032 + 614.904 NA Intergenic L1PREC2|LINE|L1 -607211 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 197648-9 chrX 64012050 64012919 + 614.904 NA Intergenic L1PA10|LINE|L1 193224 NM_152424 139285 Hs.314225 NM_152424 ENSG00000184675 AMER1 FAM123B|OSCS|WTX APC membrane recruitment protein 1 protein-coding 216885 chr16 22984180 22984997 + 614.904 NA Intergenic L4_C_Mam|LINE|RTE-X 164682 NM_020718 57478 Hs.183817 NM_020718 ENSG00000103404 USP31 - ubiquitin specific peptidase 31 protein-coding 486476-2 chr2 24541885 24543524 + 614.904 NA intron (NM_001362952, intron 1 of 23) L1M6|LINE|L1 -41773 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 217061 chr10 39029533 39030274 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 333307 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 180957-6 chr8 68849620 68850138 + 614.904 NA Intergenic Intergenic 254311 NR_039986 100505718 Hs.122386 NR_039986 ENSG00000253658 LINC01592 - long intergenic non-protein coding RNA 1592 ncRNA 201952-3 chr2 34450836 34451588 + 614.904 NA Intergenic L1MA2|LINE|L1 -226345 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 226636-4 chr5 153936057 153937013 + 614.904 NA Intergenic MER68|LTR|ERVL -37548 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA 181221-9 chr8 142367606 142368150 + 614.904 NA intron (NM_001366903, intron 1 of 9) L1MC4a|LINE|L1 35304 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 529081 chr10 41761983 41763860 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 605124 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 200195-2 chr14 72133314 72134163 + 614.904 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 200211 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 198702 chr14 71841205 71841872 + 614.904 NA Intergenic L1ME1|LINE|L1 -90633 NM_001370289 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 213547-2 chr20 33947643 33948479 + 614.904 NA Intergenic L2a|LINE|L2 -45850 NM_016732 22913 Hs.136947 NM_007367 ENSG00000125970 RALY HNRPCL2|P542 RALY heterogeneous nuclear ribonucleoprotein protein-coding 180079-6 chr4 79342600 79343393 + 614.904 NA Intergenic L1MA4A|LINE|L1 -16935 NM_032693 84779 Hs.676048 NM_032693 ENSG00000156269 NAA11 ARD1B|ARD2|hARD2 N(alpha)-acetyltransferase 11, NatA catalytic subunit protein-coding 237089-2 chr11 132569217 132570200 + 614.904 NA intron (NM_002545, intron 2 of 6) L1MEi|LINE|L1 285406 NR_046820 100874281 NR_046820 NTM-IT NTM-IT3 NTM intronic transcript ncRNA 230677 chr11 55051101 55051880 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -210665 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 211703-3 chr2 157125389 157126174 + 614.904 NA Intergenic LTR8|LTR|ERV1 -131924 NM_001329868 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding 182275-6 chr7 49569728 49570252 + 614.904 NA Intergenic Intergenic -203648 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding 274510 chr4 33592166 33593050 + 614.904 NA Intergenic HUERS-P3b-int|LTR|ERV1 447285 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 212844-6 chr2 105994871 105995510 + 614.904 NA Intergenic MER21C|LTR|ERVL -70498 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding 278200-3 chr5 46082776 46083876 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -386946 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 188775-3 chr22 27696851 27697782 + 614.904 NA Intergenic Intergenic 104440 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding 286809-2 chr10 41764053 41764929 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 603554 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 221980 chr10 31449820 31451006 + 614.904 NA intron (NM_001323646, intron 4 of 11) L1M5|LINE|L1 -50658 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 396086 chr8 114057963 114059175 + 614.904 NA Intergenic L1M2|LINE|L1 -621630 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 560089 chr17 73653455 73655418 + 614.904 NA Intergenic MER5A1|DNA|hAT-Charlie -9991 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 260983 chr4 66016681 66017849 + 614.904 NA Intergenic L1MB1|LINE|L1 -259559 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 345049-2 chr19 27559756 27561117 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -232995 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 183505-10 chr8 73221881 73222309 + 614.904 NA Intergenic Tigger1|DNA|TcMar-Tigger 37407 NM_001243237 100130301 Hs.202296 NM_001243237 ENSG00000274443 C8orf89 - chromosome 8 open reading frame 89 protein-coding 279869-2 chr4 49708228 49709020 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 721982 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 362266 chr19 37242876 37244024 + 614.904 NA exon (NM_001345947, exon 5 of 5) exon (NM_001345947, exon 5 of 5) -8435 NR_110718 101927667 Hs.633102 NR_110718 ENSG00000226686 LINC01535 - long intergenic non-protein coding RNA 1535 ncRNA 474705 chr1 227651877 227653461 + 614.904 NA intron (NM_001367909, intron 3 of 3) L1MA9|LINE|L1 45038 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 344083 chr1 209461197 209462541 + 614.904 NA Intergenic Intergenic 29736 NR_029622 406988 NR_029622 ENSG00000284485 MIR205 MIRN205|mir-205 microRNA 205 ncRNA 183856-6 chr5 42525867 42526530 + 614.904 NA intron (NM_001242400, intron 2 of 10) Tigger1|DNA|TcMar-Tigger -21845 NM_001242402 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 223298-2 chr10 39277973 39278639 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 581710 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 195715-3 chr2 130938134 130938755 + 614.904 NA intron (NM_001367493, intron 3 of 13) L1MEf|LINE|L1 101530 NM_001367493 50649 Hs.469935 NM_015320 ENSG00000136002 ARHGEF4 ASEF|ASEF1|GEF4|SMIM39|STM6 Rho guanine nucleotide exchange factor 4 protein-coding 187633 chr12 25685443 25686122 + 614.904 NA Intergenic Intergenic -37204 NM_001352232 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding 206783-4 chr14 63265457 63266278 + 614.904 NA intron (NM_020663, intron 1 of 4) MER4D|LTR|ERV1 53068 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding 190884-8 chr7 53215028 53215810 + 614.904 NA Intergenic Intergenic 179786 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 184208-2 chr12 55025249 55026074 + 614.904 NA intron (NM_021191, intron 1 of 1) BLACKJACK|DNA|hAT-Blackjack 5687 NM_021191 58158 Hs.591024 NM_021191 ENSG00000123307 NEUROD4 ATH-3|ATH3|Atoh3|MATH-3|MATH3|bHLHa4 neuronal differentiation 4 protein-coding 195627-4 chr2 66153408 66154465 + 614.904 NA Intergenic L1MA4A|LINE|L1 204392 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA 246489-2 chr19 36822814 36823901 + 614.904 NA exon (NM_001242802, exon 4 of 5) exon (NM_001242802, exon 4 of 5) 14670 NM_001242802 388536 Hs.282067 NM_206894 ENSG00000197863 ZNF790 - zinc finger protein 790 protein-coding 512215 chr3 98430136 98431838 + 614.904 NA Intergenic L1MA4A|LINE|L1 -38493 NM_001004736 26339 Hs.621533 NM_001004736 ENSG00000232382 OR5K1 HSHTPCRX10|HTPCRX10|OR3-8 olfactory receptor family 5 subfamily K member 1 protein-coding 185701-6 chr7 35358946 35359501 + 614.904 NA intron (NR_038864, intron 2 of 2) L1M5|LINE|L1 45368 NR_038864 401324 Hs.377034 NR_038864 LOC401324 - uncharacterized LOC401324 ncRNA 440974 chr1 85559853 85561791 + 614.904 NA intron (NM_001134445, intron 1 of 6) intron (NM_001134445, intron 1 of 6) 17378 NM_001134445 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding 382646 chr4 38347157 38348799 + 614.904 NA Intergenic THE1B|LTR|ERVL-MaLR -18936 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA 198614 chr14 78377054 78377744 + 614.904 NA intron (NR_073547, intron 4 of 20) L1MDa|LINE|L1 -26320 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 195979-5 chr22 48728808 48729457 + 614.904 NA intron (NM_001082967, intron 3 of 3) intron (NM_001082967, intron 3 of 3) -51163 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA 184471-5 chr5 42338178 42338887 + 614.904 NA Intergenic L1MA4A|LINE|L1 -84907 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 226460-2 chr13 93021958 93022538 + 614.904 NA Intergenic Charlie5|DNA|hAT-Charlie -23093 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA 409877 chr5 127253139 127254385 + 614.904 NA Intergenic L1M5|LINE|L1 -37002 NM_001308119 84466 Hs.438709 NM_032446 ENSG00000145794 MEGF10 EMARDD multiple EGF like domains 10 protein-coding 194310-2 chr19 30281404 30282197 + 614.904 NA Intergenic Intergenic -90584 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 203709-3 chr3 189655871 189656690 + 614.904 NA intron (NM_003722, intron 1 of 13) L1MCa|LINE|L1 24891 NM_001114979 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding 224703-3 chr3 44717553 44718670 + 614.904 NA intron (NM_001282880, intron 3 of 4) intron (NM_001282880, intron 3 of 4) 5451 NM_001134442 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 320804-2 chr5 150961462 150962496 + 614.904 NA Intergenic MER4-int|LTR|ERV1 -15395 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 198438-4 chr3 113923709 113924378 + 614.904 NA intron (NM_001172105, intron 5 of 12) L1HS|LINE|L1 -23858 NM_001363952 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding 217588-3 chr2 31639688 31640531 + 614.904 NA Intergenic L1MA4|LINE|L1 -59171 NM_000348 6716 Hs.458345 NM_000348 ENSG00000277893 SRD5A2 - steroid 5 alpha-reductase 2 protein-coding 231379 chr1 114084017 114084797 + 614.904 NA Intergenic L2c|LINE|L2 68033 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding 232434-5 chr6 38217718 38218614 + 614.904 NA intron (NM_052893, intron 10 of 11) intron (NM_052893, intron 10 of 11) -263430 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 390727-2 chr5 10098098 10099637 + 614.904 NA Intergenic L1M7|LINE|L1 151021 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding 321068 chr5 150921529 150922977 + 614.904 NA Intergenic L1MDa|LINE|L1 -17270 NM_001172831 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 534615 chr11 50461620 50463623 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 53474 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 184998-4 chr11 71226697 71227387 + 614.904 NA Intergenic L1MD1|LINE|L1 -2246 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding 701429 chr2 126540644 126542926 + 614.904 NA Intergenic L1MCa|LINE|L1 -114150 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 287951 chr1 117770095 117771060 + 614.904 NA Intergenic L1M3a|LINE|L1 159044 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding 322824 chr17 68554694 68556058 + 614.904 NA intron (NM_017565, intron 2 of 10) intron (NM_017565, intron 2 of 10) 3051 NR_027751 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding 184998-8 chr6 124673392 124673980 + 614.904 NA intron (NM_001040214, intron 4 of 6) L1MB1|LINE|L1 -288859 NR_136734 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding 179288-5 chr8 135109709 135110493 + 614.904 NA Intergenic L1MA1|LINE|L1 -124030 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 328710 chr16 83754981 83756143 + 614.904 NA intron (NM_001220489, intron 10 of 12) L1ME3A|LINE|L1 48414 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA 209067-6 chr8 140216015 140216889 + 614.904 NA intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) -115917 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 257030-3 chr20 58484966 58485973 + 614.904 NA intron (NR_130908, intron 1 of 1) intron (NR_130908, intron 1 of 1) 29469 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 183417-3 chr11 37395245 37395861 + 614.904 NA Intergenic L1M4a1|LINE|L1 -543048 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA 288917 chr14 52163517 52164580 + 614.904 NA Intergenic Intergenic -94989 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding 258172-2 chr6 40630800 40631953 + 614.904 NA Intergenic Intergenic -44012 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 214250-4 chr2 150384522 150385237 + 614.904 NA Intergenic L1PB3|LINE|L1 102816 NM_005168 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding 320628 chr4 33692877 33694104 + 614.904 NA Intergenic Intergenic 346403 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 489815 chr19 43871807 43874033 + 614.904 NA exon (NM_001033719, exon 2 of 2) exon (NM_001033719, exon 2 of 2) 7216 NM_001033719 342908 Hs.76561 NM_001033719 ENSG00000176222 ZNF404 - zinc finger protein 404 protein-coding 519770 chr12 133061608 133063316 + 614.904 NA 3' UTR (NM_003428, exon 5 of 5) 3' UTR (NM_003428, exon 5 of 5) -17741 NM_003440 7699 Hs.181552 NM_003440 ENSG00000196387 ZNF140 pHZ-39 zinc finger protein 140 protein-coding 177268-7 chr8 28654555 28655187 + 614.904 NA Intergenic Intergenic 46593 NR_126027 101929402 Hs.667366 NR_126027 ENSG00000246339 EXTL3-AS1 C8orf50 EXTL3 antisense RNA 1 ncRNA 206608-3 chr2 103732450 103733350 + 614.904 NA Intergenic L1PA15|LINE|L1 675432 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 350846-3 chr8 126675111 126676207 + 614.904 NA Intergenic Intergenic -117181 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 428763 chr10 78886424 78888314 + 614.904 NA Intergenic HAL1b|LINE|L1 180079 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 294627 chr7 4482983 4484244 + 614.904 NA Intergenic MLT1F1|LTR|ERVL-MaLR -198682 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 192465-5 chr2 76922438 76922972 + 614.904 NA intron (NR_146416, intron 1 of 1) L1MA9|LINE|L1 -63260 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 316148 chr20 47069358 47070483 + 614.904 NA intron (NM_172110, intron 5 of 13) L1M4|LINE|L1 -97047 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA 246576-5 chr9 104572775 104573722 + 614.904 NA Intergenic Intergenic 4080 NM_001004483 138802 Hs.553599 NM_001004483 ENSG00000186943 OR13C8 OR37H|OR9-10 olfactory receptor family 13 subfamily C member 8 protein-coding 177619-3 chr2 6845379 6845995 + 614.904 NA intron (NM_001256478, intron 3 of 3) HUERS-P3-int|LTR|ERV1 -5223 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA 187897 chr16 62491191 62491814 + 614.904 NA Intergenic L1MC3|LINE|L1 -455064 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 307628 chr17 34801437 34802487 + 614.904 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 159498 NM_001193529 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding 199580-3 chr2 126599038 126599819 + 614.904 NA Intergenic L1MB4|LINE|L1 -56507 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 271524-2 chr14 52172408 52173683 + 614.904 NA Intergenic Intergenic -94653 NM_001281469 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding 215655 chr15 95180232 95180904 + 614.904 NA Intergenic L1M8|LINE|L1 146532 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA 230501 chr11 114940153 114940980 + 614.904 NA Intergenic Intergenic 262039 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding 278112-4 chr19 36720334 36721410 + 614.904 NA 3' UTR (NM_001300979, exon 6 of 6) 3' UTR (NM_001300979, exon 6 of 6) 17191 NM_001363651 163081 Hs.412517 NM_152603 ENSG00000189042 ZNF567 - zinc finger protein 567 protein-coding 261334 chr19 36388981 36389994 + 614.904 NA 3' UTR (NM_133466, exon 5 of 5) 3' UTR (NM_133466, exon 5 of 5) -10286 NM_020917 57677 Hs.35524 NM_020917 ENSG00000142065 ZFP14 ZNF531 ZFP14 zinc finger protein protein-coding 581348 chr8 126304995 126307553 + 614.904 NA Intergenic L1MEc|LINE|L1 -19221 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 183066-2 chr1 232409992 232410576 + 614.904 NA intron (NM_020808, intron 17 of 20) intron (NM_020808, intron 17 of 20) 105324 NM_020808 57568 Hs.745009 NM_020808 ENSG00000116991 SIPA1L2 SPAL2|SPAR2 signal induced proliferation associated 1 like 2 protein-coding 218291 chr20 42172792 42173637 + 614.904 NA intron (NM_133170, intron 17 of 31) MamRep1527|LTR|LTR -512269 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 351901-2 chr6 61512405 61513861 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -60997 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 183944-9 chr5 36707722 36708456 + 614.904 NA Intergenic ERVL-E-int|LTR|ERVL 101483 NM_001166695 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding 252023-2 chr2 12690488 12691145 + 614.904 NA Intergenic L1MA6|LINE|L1 -26056 NM_021643 28951 Hs.467751 NM_021643 ENSG00000071575 TRIB2 C5FW|GS3955|TRB2 tribbles pseudokinase 2 protein-coding 278551 chr14 66800006 66801240 + 614.904 NA intron (NM_001024218, intron 3 of 21) L1MA2|LINE|L1 293216 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 213459 chr1 76931157 76931850 + 614.904 NA intron (NM_001320274, intron 2 of 2) intron (NM_001320274, intron 2 of 2) 64023 NM_030965 81849 Hs.149201 NM_030965 ENSG00000117069 ST6GALNAC5 SIAT7-E|SIAT7E|ST6GalNAcV ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 protein-coding 262564-3 chr7 63366569 63367793 + 614.904 NA Intergenic Intergenic -17115 NR_136256 102724738 Hs.512544 NR_136256 LOC102724738 - solute carrier family 25 member 1 pseudogene pseudo 202303-5 chr8 133923274 133923871 + 614.904 NA Intergenic L2a|LINE|L2 37076 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 219872 chr8 129798776 129799546 + 614.904 NA Intergenic MSTA-int|LTR|ERVL-MaLR -12537 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 198877-4 chr19 12074580 12075248 + 614.904 NA intron (NM_001136501, intron 3 of 3) intron (NM_001136501, intron 3 of 3) 10183 NM_001136501 284391 Hs.646391 NM_001136501 ENSG00000223547 ZNF844 - zinc finger protein 844 protein-coding 203270-4 chr7 1798273 1799065 + 614.904 NA Intergenic AluSx|SINE|Alu 45584 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA 233048 chr14 48470704 48471468 + 614.904 NA Intergenic L1MEd|LINE|L1 -676072 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 182012-2 chr11 78627426 78628169 + 614.904 NA Intergenic L1M1|LINE|L1 -52933 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 242623 chr21 30370049 30371139 + 614.904 NA TTS (NM_181621) TTS (NM_181621) 1677 NM_181621 337959 Hs.58152 NM_181621 ENSG00000182816 KRTAP13-2 KAP13-2 keratin associated protein 13-2 protein-coding 255976 chr22 34720364 34721341 + 614.904 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 277064 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 212757-2 chr16 72709919 72710768 + 614.904 NA Intergenic L1M4c|LINE|L1 -45373 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA 296559-2 chr6 70872747 70873805 + 614.904 NA intron (NM_080742, intron 2 of 3) L1M4|LINE|L1 83784 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding 378341 chr5 46150534 46151957 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -454865 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 244205-2 chr4 112829946 112831295 + 614.904 NA intron (NM_001354275, intron 1 of 43) intron (NM_001354275, intron 1 of 43) 12623 NM_001127493 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding 597423 chr2 122459393 122461789 + 614.904 NA Intergenic MIRb|SINE|MIR 612890 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 783299 chr10 43519878 43522454 + 614.904 NA Intergenic Tigger17a|DNA|TcMar-Tigger 47293 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 187106-2 chr10 91374190 91374821 + 614.904 NA intron (NR_024467, intron 3 of 4) L1MEc|LINE|L1 -34730 NM_001348365 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding 252374 chr8 127325098 127325957 + 614.904 NA intron (NR_117099, intron 2 of 3) L1MEf|LINE|L1 -74872 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA 351198 chr5 37958290 37959503 + 614.904 NA Intergenic MLT1C|LTR|ERVL-MaLR 10405 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA 182451-3 chr14 72627345 72628022 + 614.904 NA intron (NM_001280542, intron 9 of 10) L1MC4a|LINE|L1 110863 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 632912 chr11 70041988 70045072 + 614.904 NA Intergenic L1MEc|LINE|L1 20394 NR_120530 101928443 Hs.313468 NR_120529 ENSG00000248844 LINC02753 - long intergenic non-protein coding RNA 2753 ncRNA 239637 chr10 53197739 53198401 + 614.904 NA Intergenic L1MB1|LINE|L1 -426370 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 210034 chr10 52546858 52547607 + 614.904 NA Intergenic MER2|DNA|TcMar-Tigger -76699 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA 463637 chr19 56524252 56526189 + 614.904 NA exon (NM_020813, exon 5 of 5) exon (NM_020813, exon 5 of 5) -13728 NM_001308440 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding 202215-3 chr7 62797577 62798331 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 506102 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 238846 chr12 37976073 37977067 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -340204 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 235420-2 chr17 72826707 72827553 + 614.904 NA intron (NM_001352692, intron 6 of 9) L1MB7|LINE|L1 -186658 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA 416641 chr1 106469908 106471615 + 614.904 NA Intergenic L1M2|LINE|L1 -347478 NR_147165 105378889 Hs.568674 NR_147165 ENSG00000237460 LINC01661 - long intergenic non-protein coding RNA 1661 ncRNA 277322-2 chr2 126385631 126386597 + 614.904 NA Intergenic L1MD2|LINE|L1 -268129 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 229096 chr2 210501939 210502947 + 614.904 NA intron (NM_001122633, intron 1 of 38) (AT)n|Simple_repeat|Simple_repeat -17275 NM_001369256 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 211088-4 chr8 100029755 100030404 + 614.904 NA intron (NM_015668, intron 14 of 27) L1MEd|LINE|L1 25497 NR_145741 109616982 NR_145741 ENSG00000212414 SNORD77B - small nucleolar RNA, C/D box 77B snoRNA 330730-2 chr9 89028527 89029865 + 614.904 NA intron (NM_016848, intron 11 of 11) HAL1ME|LINE|L1 37728 NM_005226 1903 Hs.585118 NM_005226 ENSG00000213694 S1PR3 EDG-3|EDG3|LPB3|S1P3 sphingosine-1-phosphate receptor 3 protein-coding 190357-8 chr8 129795882 129796519 + 614.904 NA Intergenic AluSq2|SINE|Alu -9576 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 284349 chr11 48220725 48221706 + 614.904 NA Intergenic MER3|DNA|hAT-Charlie 4405 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding 194837-5 chr8 126081094 126081692 + 614.904 NA Intergenic Intergenic -130196 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 256766-4 chr8 88722835 88723867 + 614.904 NA Intergenic L1MA9|LINE|L1 -395868 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 327216 chr8 65312040 65313449 + 614.904 NA Intergenic Intergenic -132404 NR_038901 552859 Hs.156997 NR_038901 ENSG00000280725 LINC00251 C8orf25|NCRNA00251 long intergenic non-protein coding RNA 251 ncRNA 689482 chr7 5091659 5095077 + 614.904 NA Intergenic AluSg4|SINE|Alu 21308 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 188951-4 chr18 36549631 36550567 + 614.904 NA intron (NM_001281740, intron 5 of 28) L1ME1|LINE|L1 113319 NR_132982 105372071 NR_132982 LOC105372071 - uncharacterized LOC105372071 ncRNA 248948-2 chr19 43845348 43846264 + 614.904 NA intron (NM_181845, intron 6 of 6) intron (NM_181845, intron 6 of 6) 18485 NM_001297752 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding 552974 chr2 114367264 114369149 + 614.904 NA Intergenic Intergenic -74435 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 182011-6 chr8 135066664 135067351 + 614.904 NA Intergenic HAL1|LINE|L1 -167124 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 190444-3 chr5 24761551 24762199 + 614.904 NA Intergenic L1PB4|LINE|L1 78708 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA 190357-9 chr8 130828688 130829283 + 614.904 NA intron (NM_001115, intron 12 of 17) HUERS-P3-int|LTR|ERV1 211924 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 202040-2 chr15 94563432 94564037 + 614.904 NA Intergenic L1M5|LINE|L1 207804 NM_001159644 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding 339075 chr19 27662590 27663699 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -130287 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 192728-2 chr10 58538717 58539353 + 614.904 NA intron (NM_001080512, intron 1 of 20) L1PB4|LINE|L1 26163 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 254395 chr5 166653508 166654682 + 614.904 NA Intergenic L1M4|LINE|L1 272275 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA 192289-7 chr5 10993077 10993842 + 614.904 NA intron (NM_001288715, intron 17 of 20) L1ME4a|LINE|L1 -232225 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding 203884-4 chr3 54018991 54019895 + 614.904 NA Intergenic L1MC4|LINE|L1 -103109 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding 180342-2 chr2 117364477 117365105 + 614.904 NA Intergenic L1PB3|LINE|L1 -449900 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 262476-2 chr8 136861976 136863041 + 614.904 NA intron (NR_147196, intron 4 of 5) L1ME1|LINE|L1 331710 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 241306-2 chr22 25214269 25215073 + 614.904 NA Intergenic MIRb|SINE|MIR -4968 NM_000496 1415 Hs.373074 NM_000496 ENSG00000244752 CRYBB2 CCA2|CRYB2|CRYB2A|CTRCT3|D22S665 crystallin beta B2 protein-coding 239900 chr2 39942028 39943010 + 614.904 NA intron (NR_038441, intron 2 of 4) L2a|LINE|L2 24885 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA 208804-5 chr19 53240844 53241562 + 614.904 NA intron (NM_001317998, intron 4 of 4) intron (NM_001317998, intron 4 of 4) 13647 NM_001317998 342926 Hs.20506 NM_182609 ENSG00000197928 ZNF677 - zinc finger protein 677 protein-coding 392308 chr5 46229923 46231780 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -534471 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 261158 chr2 35569046 35570135 + 614.904 NA Intergenic L1MA5|LINE|L1 98185 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 187721-7 chr5 31303140 31303695 + 614.904 NA intron (NM_001362435, intron 6 of 10) intron (NM_001362435, intron 6 of 10) 109731 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 289620 chr15 70593223 70594341 + 614.904 NA Intergenic L1MEd|LINE|L1 -7176 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA 225670-3 chr2 128927041 128928043 + 614.904 NA Intergenic L1MC3|LINE|L1 62942 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 305783 chr1 55664495 55665466 + 614.904 NA Intergenic Intergenic 279983 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA 284085-2 chr7 4862462 4863631 + 614.904 NA intron (NM_018059, intron 2 of 14) L1MEd|LINE|L1 -1016 NM_020144 56903 Hs.487409 NM_020144 ENSG00000218823 PAPOLB PAPT|TPAP poly(A) polymerase beta protein-coding 216710-5 chr5 37981206 37981921 + 614.904 NA Intergenic Intergenic 33072 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA 291464-4 chr7 42816510 42818006 + 614.904 NA Intergenic L1MA7|LINE|L1 94585 NM_001363436 79020 Hs.698120 NM_024054 ENSG00000136197 C7orf25 - chromosome 7 open reading frame 25 protein-coding 281274 chr8 126609183 126610298 + 614.904 NA Intergenic Intergenic -51262 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 307276 chr11 50370258 50371306 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -38365 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 360773-2 chr22 33864040 33865196 + 614.904 NA intron (NM_001362949, intron 1 of 15) L2c|LINE|L2 55810 NM_133642 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 490781 chr5 179079184 179080974 + 614.904 NA exon (NM_014594, exon 5 of 5) exon (NM_014594, exon 5 of 5) 19706 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding 264848 chr14 21145241 21145957 + 614.904 NA Intergenic L1M3|LINE|L1 10464 NM_001004731 390445 Hs.553768 NM_001004731 ENSG00000169327 OR5AU1 OR14-38 olfactory receptor family 5 subfamily AU member 1 protein-coding 191762-8 chr21 30597014 30597608 + 614.904 NA Intergenic MIR|SINE|MIR 1563 NM_181604 337967 Hs.553690 NM_181604 ENSG00000186930 KRTAP6-2 KAP6.2 keratin associated protein 6-2 protein-coding 360685-3 chr4 168086404 168087958 + 614.904 NA Intergenic L2a|LINE|L2 -5356 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding 357786 chr7 9386634 9388048 + 614.904 NA Intergenic L1M2|LINE|L1 -246929 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo 519330 chr3 13900539 13902437 + 614.904 NA Intergenic Intergenic -21417 NM_004625 7476 Hs.72290 NM_004625 ENSG00000154764 WNT7A Wnt-7a Wnt family member 7A protein-coding 214513 chr10 62698113 62698872 + 614.904 NA Intergenic Intergenic -106228 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding 308330-2 chr5 46009800 46010856 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -313948 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 506241 chr21 28808123 28809880 + 614.904 NA Intergenic Intergenic 76366 NM_013240 29104 Hs.163846 NM_013240 ENSG00000156239 N6AMT1 C21orf127|HEMK2|MTQ2|N6AMT|PRED28|m.HsaHemK2P N-6 adenine-specific DNA methyltransferase 1 protein-coding 337231 chr5 26804873 26806086 + 614.904 NA Intergenic L1MCa|LINE|L1 233107 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 210473-5 chr8 122899562 122900435 + 614.904 NA intron (NM_001362797, intron 3 of 4) intron (NM_001362797, intron 3 of 4) 118343 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding 216534-5 chr5 178887998 178888702 + 614.904 NA Intergenic Intergenic -7563 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding 182187 chr1 63954031 63954814 + 614.904 NA intron (NM_005012, intron 1 of 8) MLT1J|LTR|ERVL-MaLR 157783 NR_110666 101927034 Hs.680824 NR_110665 ENSG00000223949 ROR1-AS1 - ROR1 antisense RNA 1 ncRNA 217500-3 chr20 39772233 39772718 + 614.904 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -231986 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 231291 chr8 138436109 138436881 + 614.904 NA intron (NM_001362965, intron 1 of 19) LTR89|LTR|ERVL? 60766 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 195012-7 chr8 122232764 122233354 + 614.904 NA Intergenic Intergenic 335585 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 192289-3 chr17 62128388 62129213 + 614.904 NA Intergenic L1ME3A|LINE|L1 -63522 NM_005121 9969 Hs.282678 NM_005121 ENSG00000108510 MED13 ARC250|DRIP250|HSPC221|THRAP1|TRAP240 mediator complex subunit 13 protein-coding 189478-3 chr14 80077744 80078319 + 614.904 NA Intergenic Intergenic -133388 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA 246840 chr7 5095779 5096744 + 614.904 NA Intergenic L1MA5|LINE|L1 24201 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 279605 chr10 36286552 36287740 + 614.904 NA Intergenic L1MA8|LINE|L1 508844 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 195100-3 chr18 34106089 34106952 + 614.904 NA intron (NM_001353232, intron 2 of 9) intron (NM_001353232, intron 2 of 9) -57908 NM_001353236 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding 267395 chr2 60154969 60156379 + 614.904 NA Intergenic Intergenic 227362 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 270294-4 chr3 102925428 102926558 + 614.904 NA Intergenic L1MCb|LINE|L1 490978 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 256854 chr5 26491311 26492322 + 614.904 NA Intergenic HERV35I-int|LTR|ERV1 546770 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 365341 chr5 150948909 150950425 + 614.904 NA Intergenic Intergenic -3083 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 303411-2 chr19 52113911 52115049 + 614.904 NA non-coding (NR_135823, exon 5 of 5) non-coding (NR_135823, exon 5 of 5) -18715 NM_001369830 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding 307891 chr1 174530437 174531673 + 614.904 NA intron (NM_001366446, intron 13 of 25) L1ME3|LINE|L1 83091 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding 338812-2 chr2 170911125 170912345 + 614.904 NA Intergenic L1MB5|LINE|L1 -16742 NM_001201428 26003 Hs.431317 NM_015530 ENSG00000115806 GORASP2 GOLPH6|GRASP55|GRS2|p59 golgi reassembly stacking protein 2 protein-coding 236474-2 chr17 79638223 79639296 + 614.904 NA Intergenic MSTB1|LTR|ERVL-MaLR -27708 NM_001350453 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding 188424-4 chr2 41584907 41585585 + 614.904 NA Intergenic L1PA10|LINE|L1 -292309 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 262564 chr11 63470758 63471787 + 614.904 NA intron (NM_054108, intron 3 of 5) intron (NM_054108, intron 3 of 5) 19895 NM_001146729 117245 Hs.410316 NM_054108 ENSG00000168004 PLAAT5 HRASLS5|HRLP5|HRSL5|PLAAT-5|RLP1|iNAT phospholipase A and acyltransferase 5 protein-coding 306837 chr19 34755781 34756901 + 614.904 NA Intergenic Tigger17|DNA|TcMar-Tigger 16874 NM_001007248 148103 Hs.590961 NM_001007247 ENSG00000153896 ZNF599 - zinc finger protein 599 protein-coding 497984 chr17 61436255 61438105 + 614.904 NA Intergenic L1MA9|LINE|L1 -15242 NM_001321120 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding 938430 chr19 24368509 24371500 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -206557 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 314655 chr2 107120755 107121857 + 614.904 NA Intergenic Intergenic 228219 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA 215919-2 chr10 85811944 85812875 + 614.904 NA intron (NM_017551, intron 8 of 15) intron (NM_017551, intron 8 of 15) 234678 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA 305958 chr14 53503712 53504800 + 614.904 NA Intergenic Intergenic 350902 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA 453535 chr14 65395876 65397379 + 614.904 NA Intergenic THE1B|LTR|ERVL-MaLR -13965 NM_004480 2530 Hs.597649 NM_004480 ENSG00000033170 FUT8 CDGF|CDGF1 fucosyltransferase 8 protein-coding 429027 chr10 31174248 31175806 + 614.904 NA Intergenic L1MEc|LINE|L1 -12856 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA 242272 chr12 13586579 13587326 + 614.904 NA intron (NM_000834, intron 9 of 12) L2a|LINE|L2 -210207 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA 343995 chr12 133057289 133058594 + 614.904 NA exon (NM_003428, exon 5 of 5) exon (NM_003428, exon 5 of 5) 20359 NM_001289972 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding 201073-3 chr5 18254044 18254639 + 614.904 NA Intergenic Intergenic 447067 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 178586-2 chr11 12297578 12298227 + 614.904 NA intron (NM_032867, intron 3 of 8) L1ME4b|LINE|L1 11002 NM_032867 84953 Hs.60371 NM_032867 ENSG00000133816 MICALCL Ebitein1 MICAL C-terminal like protein-coding 206696 chr1 104468875 104469731 + 614.904 NA Intergenic Intergenic 396280 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo 193519-4 chr3 15841598 15842408 + 614.904 NA intron (NM_001349279, intron 1 of 28) (TA)n|Simple_repeat|Simple_repeat 17811 NM_015199 23243 Hs.335239 NM_015199 ENSG00000206560 ANKRD28 PITK|PPP1R65 ankyrin repeat domain 28 protein-coding 270733 chr3 118073401 118074451 + 614.904 NA Intergenic L1MA3|LINE|L1 -383001 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 262827 chr1 42518795 42519584 + 614.904 NA intron (NM_001355227, intron 6 of 18) L1MB3|LINE|L1 -13831 NM_001080850 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding 186843-5 chr8 139546029 139546667 + 614.904 NA Intergenic LTR2C|LTR|ERV1 156775 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 184032 chr13 54791385 54791931 + 614.904 NA Intergenic MSTB1-int|LTR|ERVL-MaLR -382796 NR_049804 100846996 NR_049804 ENSG00000264387 MIR5007 - microRNA 5007 ncRNA 217412 chr2 222369819 222370567 + 614.904 NA Intergenic L1MEg|LINE|L1 49532 NR_136640 440934 Hs.732732 NR_136638 ENSG00000237732 CT75 - cancer/testis associated transcript 75 ncRNA 458806 chr2 114237327 114238929 + 614.904 NA Intergenic MIRb|SINE|MIR -204513 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 183593-2 chr10 104671765 104672569 + 614.904 NA intron (NM_014978, intron 1 of 26) L1MB3|LINE|L1 -5951 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA 317466 chr5 46240892 46241961 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -545046 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 284700 chr12 34664000 34665012 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 642010 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 324406 chr20 6282131 6283248 + 614.904 NA Intergenic L1MEg|LINE|L1 -144043 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA 244644 chr1 40490810 40491694 + 614.904 NA intron (NM_001320178, intron 5 of 5) L1ME3Cz|LINE|L1 13962 NM_001320178 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding 225582 chr1 62583909 62584584 + 614.904 NA 3' UTR (NM_001272002, exon 16 of 16) 3' UTR (NM_001272002, exon 16 of 16) -13274 NM_014495 27329 Hs.209153 NM_014495 ENSG00000132855 ANGPTL3 ANG-5|ANGPT5|ANL3|FHBL2 angiopoietin like 3 protein-coding 249739-3 chr7 66264568 66265175 + 614.904 NA intron (NM_003596, intron 2 of 5) L1M4|LINE|L1 59537 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding 343555 chr2 89833921 89835120 + 614.904 NA Intergenic Intergenic -196613 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 195803-3 chr16 58802411 58802941 + 614.904 NA Intergenic AluJo|SINE|Alu -68360 NM_002080 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding 181397 chr10 39412815 39413628 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 716625 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 263618 chr5 150929807 150930927 + 614.904 NA TTS (NR_026867) TTS (NR_026867) 16217 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 198438-2 chr10 41783531 41784209 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 584175 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 187546-5 chr6 39662029 39662722 + 614.904 NA intron (NM_001289020, intron 3 of 21) MamRep1151|LTR?|LTR? 63033 NM_145027 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding 195627-3 chr17 71266455 71267241 + 614.904 NA Intergenic L2a|LINE|L2 -64669 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 306925-3 chr8 144973346 144974248 + 614.904 NA non-coding (NR_023392, exon 5 of 5) non-coding (NR_023392, exon 5 of 5) -21068 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 362442 chr22 48311605 48312958 + 614.904 NA Intergenic Intergenic 37917 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 401444 chr19 28782001 28783254 + 614.904 NA Intergenic L1PA15-16|LINE|L1 -54933 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo 543048 chr2 104014293 104016372 + 614.904 NA Intergenic L1ME3A|LINE|L1 393000 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 194749-4 chr8 134407527 134408210 + 614.904 NA Intergenic Intergenic -190203 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 259577 chr7 17269098 17270084 + 614.904 NA Intergenic L1M2|LINE|L1 -29061 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding 215919-4 chr14 44585471 44586136 + 614.904 NA Intergenic Intergenic 78394 NR_135257 105370473 Hs.180134 NR_135257 ENSG00000258747 LOC105370473 - uncharacterized LOC105370473 ncRNA 237265 chr18 4891633 4892538 + 614.904 NA Intergenic MER65C|LTR|ERV1 -189097 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 178586-8 chr4 105094763 105095368 + 614.904 NA Intergenic L1M4|LINE|L1 -50810 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 551744 chr5 45986802 45988783 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -291412 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 586793 chr7 7070159 7072818 + 614.904 NA Intergenic SATR1|Satellite|Satellite -4443 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA 450548 chr19 43859116 43861005 + 614.904 NA Intergenic L1MA5A|LINE|L1 20076 NM_001033719 342908 Hs.76561 NM_001033719 ENSG00000176222 ZNF404 - zinc finger protein 404 protein-coding 218027 chr3 174451347 174451845 + 614.904 NA Intergenic Intergenic -407738 NM_207015 254827 Hs.565848 NM_207015 ENSG00000177694 NAALADL2 - N-acetylated alpha-linked acidic dipeptidase like 2 protein-coding 470401 chr2 21533875 21535413 + 614.904 NA Intergenic L1ME1|LINE|L1 176008 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA 180870 chr5 46162127 46162909 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -466138 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 219081 chr1 31458284 31459321 + 614.904 NA Intergenic HERVIP10F-int|LTR|ERV1 -41283 NR_034112 149086 Hs.729905 NR_034112 ENSG00000260386 LDC1P LINC01225 leucine decarboxylase 1, pseudogene pseudo 289883 chr7 27271144 27272250 + 614.904 NA Intergenic L1ME1|LINE|L1 -24468 NR_120507 101410536 Hs.687800 NR_120507 ENSG00000253405 EVX1-AS EVX1-AS1 EVX1 antisense RNA ncRNA 184032-3 chr4 100329972 100330718 + 614.904 NA Intergenic ERVL-E-int|LTR|ERVL 64902 NR_135619 107399301 NR_135619 SNORA101A - small nucleolar RNA, H/ACA box 101A snoRNA 432189 chr10 33589283 33590896 + 614.904 NA Intergenic L4_A_Mam|LINE|RTE-X 182591 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 653291 chr10 121004941 121007163 + 614.904 NA Intergenic L1PA15-16|LINE|L1 154690 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding 558332 chr8 139557318 139559145 + 614.904 NA Intergenic Intergenic 144892 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 193519-3 chr3 5665645 5666320 + 614.904 NA Intergenic L1M4b|LINE|L1 -415727 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 263091 chr10 93170055 93171138 + 614.904 NA Intergenic L1MEg|LINE|L1 96703 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding 192640 chr8 139723921 139724507 + 614.904 NA Intergenic L1ME3D|LINE|L1 -21091 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 503782 chr19 24341234 24343349 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -178844 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 214338-3 chr20 31269068 31269709 + 614.904 NA Intergenic Intergenic 11724 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 829154 chr14 50471393 50474080 + 614.904 NA intron (NM_198794, intron 9 of 31) intron (NM_198794, intron 9 of 31) 59833 NM_198794 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding 234981-2 chr2 13176087 13176909 + 614.904 NA Intergenic THE1D|LTR|ERVL-MaLR -169485 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 257030-2 chr2 67763319 67764210 + 614.904 NA Intergenic Charlie29a|DNA|hAT-Charlie 61798 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA 196594-2 chr8 46839499 46840084 + 614.904 NA Intergenic BSR/Beta|Satellite|Satellite -1095 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA 625093 chr18 7297481 7299543 + 614.904 NA Intergenic L1MB7|LINE|L1 67408 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding 203182-5 chr8 136848370 136849224 + 614.904 NA intron (NR_147196, intron 4 of 5) L1PA16|LINE|L1 317999 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 208804 chr1 178209967 178210905 + 614.904 NA intron (NM_170692, intron 1 of 17) L1MEd|LINE|L1 116332 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding 179728 chr14 40159546 40160272 + 614.904 NA Intergenic L1MA3|LINE|L1 -727409 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 202830-7 chr9 103354624 103355539 + 614.904 NA Intergenic L1MEc|LINE|L1 -30048 NR_121578 101928496 Hs.410860 NR_121578 ENSG00000225564 LINC01492 - long intergenic non-protein coding RNA 1492 ncRNA 225406-2 chr12 22888921 22889793 + 614.904 NA Intergenic Intergenic 264186 NM_018638 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding 212669 chr10 59922341 59923009 + 614.904 NA Intergenic L1M4c|LINE|L1 -16119 NM_005436 8030 Hs.591360 NM_005436 ENSG00000108091 CCDC6 D10S170|H4|PTC|TPC|TST1 coiled-coil domain containing 6 protein-coding 329588 chr8 134177642 134178790 + 614.904 NA Intergenic HERV16-int|LTR|ERVL 291720 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 335474 chr18 12827568 12828645 + 614.904 NA intron (NM_080423, intron 4 of 8) HAL1M8|LINE|L1 12856 NM_001308287 5771 Hs.654527 NM_002828 ENSG00000175354 PTPN2 PTN2|PTPT|TC-PTP|TCELLPTP|TCPTP protein tyrosine phosphatase non-receptor type 2 protein-coding 545683 chr14 72341805 72343897 + 614.904 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -173969 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 326163 chr1 34511576 34512789 + 614.904 NA Intergenic L1ME1|LINE|L1 157512 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 297262-2 chr9 138089591 138090604 + 614.904 NA intron (NM_001243812, intron 35 of 45) L1MA5|LINE|L1 -45026 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA 206256-3 chr2 100697669 100698344 + 614.904 NA Intergenic L1M4b|LINE|L1 94267 NR_146956 105373507 NR_146956 LINC01849 - long intergenic non-protein coding RNA 1849 ncRNA 309736-2 chr22 48727405 48728487 + 614.904 NA intron (NM_001082967, intron 3 of 3) intron (NM_001082967, intron 3 of 3) -52349 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA 386247 chr5 1718581 1719954 + 614.904 NA Intergenic Intergenic -10399 NR_036240 100422966 NR_036240 ENSG00000263746 MIR4277 - microRNA 4277 ncRNA 237880-4 chr6 157390188 157390921 + 614.904 NA intron (NM_024630, intron 1 of 8) L1MEf|LINE|L1 9364 NM_024630 79683 Hs.596214 NM_024630 ENSG00000175048 ZDHHC14 NEW1CP zinc finger DHHC-type containing 14 protein-coding 324054 chr22 26250715 26251848 + 614.904 NA intron (NM_001184776, intron 1 of 14) L1MA5|LINE|L1 81807 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding 264497 chr8 27071763 27072963 + 614.904 NA Intergenic Intergenic -23400 NR_031680 100313884 NR_031680 ENSG00000221616 MIR548H4 MIR548H-4|MIRN548H4|hsa-mir-548h-4 microRNA 548h-4 ncRNA 310878 chr17 68276861 68278284 + 614.904 NA intron (NM_004694, intron 2 of 5) AluSz|SINE|Alu 13555 NM_001174166 9120 Hs.42645 NM_004694 ENSG00000108932 SLC16A6 MCT6|MCT7 solute carrier family 16 member 6 protein-coding 180870-3 chr8 139093583 139094378 + 614.904 NA Intergenic Intergenic -179939 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 222244-2 chr2 4173798 4174760 + 614.904 NA Intergenic HUERS-P3b-int|LTR|ERV1 200118 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA 179200-2 chr14 66803861 66804450 + 614.904 NA intron (NM_001024218, intron 3 of 21) L1MEg2|LINE|L1 296748 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 282329-2 chr16 20224341 20225353 + 614.904 NA Intergenic Intergenic 102666 NM_001007240 2813 Hs.53985 NM_001502 ENSG00000169347 GP2 ZAP75 glycoprotein 2 protein-coding 263003 chr11 59693109 59694132 + 614.904 NA Intergenic L1M3de|LINE|L1 20225 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding 239724 chr2 117595261 117595951 + 614.904 NA Intergenic L1PB1|LINE|L1 -219085 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 231379-5 chr8 86585746 86586437 + 614.904 NA intron (NM_019098, intron 15 of 17) intron (NM_019098, intron 15 of 17) 71656 NM_003909 8895 Hs.191219 NM_003909 ENSG00000085719 CPNE3 CPN3|PRO1071 copine 3 protein-coding 177444-2 chr11 70449892 70450498 + 614.904 NA Intergenic MER6C|DNA|TcMar-Tigger 51666 NM_001184740 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding 252813 chr5 153272345 153273696 + 614.904 NA Intergenic Intergenic -217504 NR_047578 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding 182626-3 chr10 68316037 68316626 + 614.904 NA intron (NM_001033083, intron 1 of 8) L1M4|LINE|L1 -15362 NM_001322445 3189 Hs.643472 NM_012207 ENSG00000096746 HNRNPH3 2H9|HNRPH3 heterogeneous nuclear ribonucleoprotein H3 protein-coding 386599 chr10 101174186 101175565 + 614.904 NA Intergenic L1MEh|LINE|L1 -1447 NR_120620 101927396 Hs.551648 NR_120620 ENSG00000237579 LINC01514 - long intergenic non-protein coding RNA 1514 ncRNA 562198 chr11 93993200 93996100 + 614.904 NA Intergenic LOR1-int|LTR|ERV1 -26704 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding 212844 chr12 14473333 14474204 + 614.904 NA intron (NM_181352, intron 10 of 14) L1M4a1|LINE|L1 88487 NM_181352 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 535669 chr2 100162477 100164423 + 614.904 NA Intergenic L1MEg|LINE|L1 -20860 NM_002285 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding 423317 chr6 27451197 27452789 + 614.904 NA exon (NM_001318893, exon 6 of 6) exon (NM_001318893, exon 6 of 6) 20905 NM_001318892 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding 265287 chr10 48785264 48786345 + 614.904 NA intron (NM_020945, intron 19 of 61) L1MD2|LINE|L1 100341 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding 248509-3 chr3 22415815 22416730 + 614.904 NA Intergenic Intergenic 459133 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA 380625 chr12 15457504 15458635 + 614.904 NA intron (NM_030667, intron 1 of 26) L1MB1|LINE|L1 -88542 NM_030670 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding 188336-2 chr2 16994608 16995245 + 614.904 NA Intergenic L1MA3|LINE|L1 -329092 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding 313513 chr10 43011038 43012444 + 614.904 NA Intergenic MLT1A0|LTR|ERVL-MaLR 14178 NR_049836 100847014 NR_049836 ENSG00000263795 MIR5100 - microRNA 5100 ncRNA 218115 chr10 120471793 120472650 + 614.904 NA intron (NR_134516, intron 2 of 4) L1ME3G|LINE|L1 15267 NM_001318167 196051 Hs.40479 NM_001030059 ENSG00000203805 PLPP4 DPPL2|PPAPDC1|PPAPDC1A phospholipid phosphatase 4 protein-coding 191762-9 chr22 47910448 47911183 + 614.904 NA Intergenic L1MEf|LINE|L1 279141 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA 195627-9 chr7 29253262 29254216 + 614.904 NA intron (NM_001293072, intron 1 of 12) MIRb|SINE|MIR -44769 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA 236211-4 chr2 75975308 75976180 + 614.904 NA Intergenic Intergenic -264829 NM_001201335 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 186579-4 chr8 139063918 139064576 + 614.904 NA Intergenic L2|LINE|L2 -150206 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 196506-4 chr8 131444069 131444719 + 614.904 NA Intergenic Intergenic -403485 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 184647-2 chr3 5281907 5282563 + 614.904 NA Intergenic L1M1|LINE|L1 -31980 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 419891 chr19 27667370 27669025 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -125234 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 219784-2 chr2 162942912 162943927 + 614.904 NA Intergenic AluSx|SINE|Alu -104652 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding 312371-2 chr20 51300508 51301528 + 614.904 NA Intergenic Intergenic 151959 NR_036162 100422889 NR_036162 ENSG00000266761 MIR3194 mir-3194 microRNA 3194 ncRNA 698970 chr1 90669647 90672743 + 614.904 NA Intergenic Intergenic 13445 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA 349529 chr1 33224002 33225336 + 614.904 NA Intergenic L1MEg|LINE|L1 -31823 NM_152493 149076 Hs.743358 NM_152493 ENSG00000160094 ZNF362 RN|lin-29 zinc finger protein 362 protein-coding 233751 chr1 158912763 158913542 + 614.904 NA Intergenic L1M1|LINE|L1 -18400 NM_198930 149628 Hs.710248 NM_152501 ENSG00000163564 PYHIN1 IFIX pyrin and HIN domain family member 1 protein-coding 520472 chr11 112413403 112415523 + 614.904 NA Intergenic HAL1|LINE|L1 -67769 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA 224264-4 chr5 46168871 46169680 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -472895 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 287599 chr6 144202877 144203984 + 614.904 NA Intergenic MLT1L|LTR|ERVL-MaLR 52913 NM_003764 8676 Hs.118958 NM_003764 ENSG00000135604 STX11 FHL4|HLH4|HPLH4 syntaxin 11 protein-coding 234981 chr12 114591328 114592238 + 614.904 NA Intergenic Intergenic 92392 NM_016569 6926 Hs.744016 NM_005996 ENSG00000135111 TBX3 TBX3-ISO|UMS|XHL T-box transcription factor 3 protein-coding 226109 chr10 58440294 58441259 + 614.904 NA Intergenic L1ME1|LINE|L1 55366 NM_003201 7019 Hs.594250 NM_003201 ENSG00000108064 TFAM MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 transcription factor A, mitochondrial protein-coding 318257-2 chr7 62888477 62889590 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 415023 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 207574 chr14 81966306 81967000 + 614.904 NA Intergenic LTR33|LTR|ERVL -223515 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 223737 chr14 72531924 72533021 + 614.904 NA intron (NM_001370288, intron 15 of 16) Tigger1|DNA|TcMar-Tigger 15652 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 505714 chr2 67027267 67028946 + 614.904 NA Intergenic L1ME2z|LINE|L1 -58340 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA 224440 chr8 140029746 140030463 + 614.904 NA intron (NM_001160372, intron 17 of 22) L1MC|LINE|L1 70431 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 350407 chr15 70232640 70233842 + 614.904 NA Intergenic HAL1ME|LINE|L1 -135324 NM_001282979 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding 284085 chr18 14114446 14115981 + 614.904 NA intron (NM_145287, intron 2 of 2) L1MB2|LINE|L1 17222 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding 280484 chr21 29526236 29527482 + 614.904 NA Intergenic MSTA-int|LTR|ERVL-MaLR 30812 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA 181309-8 chr2 228328656 228329448 + 614.904 NA Intergenic Intergenic -147365 NM_001142644 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding 308330 chr22 19318527 19319835 + 614.904 NA Intergenic L1MC2|LINE|L1 -27462 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding 333278 chr1 43193289 43194430 + 614.904 NA intron (NM_001195831, intron 6 of 23) L1MB7|LINE|L1 -21289 NM_001159936 10969 Hs.346868 NM_006824 ENSG00000117395 EBNA1BP2 EBP2|NOBP|P40 EBNA1 binding protein 2 protein-coding 202830-4 chr11 24106347 24106881 + 614.904 NA Intergenic THE1D-int|LTR|ERVL-MaLR -390439 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding 287687 chr19 52386601 52387705 + 614.904 NA Intergenic Intergenic 10604 NR_125345 102724105 Hs.188680 NR_125345 ENSG00000269834 ZNF528-AS1 - ZNF528 antisense RNA 1 ncRNA 190884 chr19 27565120 27565668 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -228037 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 251671 chr2 35698589 35699163 + 614.904 NA Intergenic Intergenic 227471 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 282943-2 chr3 34458499 34459521 + 614.904 NA Intergenic L1M2|LINE|L1 660380 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 268801-2 chr8 138232197 138233189 + 614.904 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) -149148 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 183505-2 chr12 23522758 23523597 + 614.904 NA Intergenic L1MEg|LINE|L1 61409 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 389058 chr3 118368846 118370125 + 614.904 NA Intergenic L1M4b|LINE|L1 -272283 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 260544 chr5 10890629 10891774 + 614.904 NA Intergenic MLT1B|LTR|ERVL-MaLR -129967 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding 388795 chr4 33633652 33635526 + 614.904 NA Intergenic THE1D-int|LTR|ERVL-MaLR 405304 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 299985-2 chr20 46502221 46503601 + 614.904 NA exon (NM_001353824, exon 5 of 5) exon (NM_001353824, exon 5 of 5) 10661 NM_001353821 55713 Hs.147041 NM_018102 ENSG00000198185 ZNF334 - zinc finger protein 334 protein-coding 219609 chr9 29929637 29930446 + 614.904 NA Intergenic LTR106_Mam|LTR|LTR 478413 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA 263882 chr17 57387390 57388390 + 614.904 NA intron (NM_001322250, intron 5 of 13) intron (NM_001322250, intron 5 of 13) 130871 NM_170721 124540 Hs.658922 NM_138962 ENSG00000153944 MSI2 MSI2H musashi RNA binding protein 2 protein-coding 184998-5 chr2 66684080 66684693 + 614.904 NA intron (NR_110156, intron 4 of 5) intron (NR_110156, intron 4 of 5) 18841 NR_110265 101927577 Hs.380543 NR_110264 ENSG00000237179 LINC01797 - long intergenic non-protein coding RNA 1797 ncRNA 263179 chr14 45786075 45786959 + 614.904 NA Intergenic LTR25-int|LTR|ERV1 -70915 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 679820 chr7 34123334 34125666 + 614.904 NA intron (NM_133468, intron 14 of 15) intron (NM_133468, intron 14 of 15) 218961 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding 184208 chr10 29117461 29118044 + 614.904 NA Intergenic L1MA9|LINE|L1 -171318 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding 505099 chr10 41773635 41775399 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 593528 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 286018 chr9 36786293 36787431 + 614.904 NA Intergenic LTR16A|LTR|ERVL 36737 NR_039686 100616289 NR_039686 ENSG00000266255 MIR4475 - microRNA 4475 ncRNA 217149-6 chr8 138441087 138442022 + 614.904 NA intron (NM_001362965, intron 1 of 19) X6B_LINE|LINE|CR1 55707 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 183329-6 chr7 104262864 104263440 + 614.904 NA Intergenic L1MC1|LINE|L1 -55105 NM_181747 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding 221189 chr22 29175294 29175909 + 614.904 NA Intergenic L1M4b|LINE|L1 -30295 NM_001267895 129080 Hs.289106 NM_133455 ENSG00000186998 EMID1 EMI5|EMU1 EMI domain containing 1 protein-coding 204060-2 chr8 139533102 139533837 + 614.904 NA Intergenic Intergenic 169654 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 515641 chr6 40023800 40025560 + 614.904 NA Intergenic Intergenic -90218 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 209682-5 chr3 175966517 175967590 + 614.904 NA Intergenic L1M4a2|LINE|L1 -190720 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA 434473 chr14 60476154 60477801 + 614.904 NA intron (NM_174978, intron 5 of 17) L4_A_Mam|LINE|RTE-X 9086 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 191762-3 chr14 51896455 51897054 + 614.904 NA intron (NM_001243773, intron 2 of 3) intron (NM_001243773, intron 2 of 3) 21817 NR_126331 102723604 Hs.667541 NR_126331 ENSG00000258928 LOC102723604 - uncharacterized LOC102723604 ncRNA 813078 chr21 26980916 26984323 + 614.904 NA Intergenic Intergenic -15531 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 343643 chr9 28057594 28059005 + 614.904 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) -484433 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 180518 chr11 63582043 63582968 + 614.904 NA intron (NM_007069, intron 3 of 3) HAL1|LINE|L1 -19126 NM_017878 54979 Hs.272805 NM_017878 ENSG00000133328 PLAAT2 HRASLS2|PLA1/2-2|PLAAT-2 phospholipase A and acyltransferase 2 protein-coding 288478-2 chr3 112209997 112211176 + 614.904 NA intron (NM_001320531, intron 14 of 27).2 L1MB5|LINE|L1 77163 NR_157393 112806053 NR_157393 TBILA - TGF-beta induced lncRNA ncRNA 839080 chr5 2879830 2882544 + 614.904 NA Intergenic L1ME3|LINE|L1 -36667 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA 243150 chr10 39518843 39519798 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 822724 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 197911-3 chr10 78171469 78172299 + 614.904 NA Intergenic Intergenic -76741 NR_038985 100132987 Hs.55047 NR_038985 ENSG00000230417 LINC00856 - long intergenic non-protein coding RNA 856 ncRNA 331960 chr7 64712976 64714037 + 614.904 NA Intergenic Intergenic 34442 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 255097 chr14 84138085 84139188 + 614.904 NA Intergenic Intergenic -1133296 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 410229-2 chr7 71763098 71764748 + 614.904 NA Intergenic L1MC1|LINE|L1 -456153 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA 339075-2 chr19 31525101 31526533 + 614.904 NA Intergenic L1MD3|LINE|L1 -62372 NM_001278578 100507527 Hs.432564 NM_001205273 THEG5 - testis highly expressed protein 5 protein-coding 219433 chr10 80995333 80996344 + 614.904 NA Intergenic L1PB1|LINE|L1 346041 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 214250-2 chr17 77703106 77703877 + 614.904 NA Intergenic L1MB3|LINE|L1 25068 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA 217588-6 chr8 138418006 138418828 + 614.904 NA intron (NM_001362965, intron 1 of 19) L1PA15|LINE|L1 78844 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 406276 chr21 15433758 15435313 + 614.904 NA Intergenic LTR48|LTR|ERV1 -295399 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding 317202 chr10 81576108 81577119 + 614.904 NA Intergenic LTR16C|LTR|ERVL -298581 NM_001010848 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 535669-2 chr20 45731978 45734206 + 614.904 NA Intergenic L1M2c|LINE|L1 10745 NM_178455 391253 Hs.677891 NM_178455 ENSG00000149651 SPINT4 C20orf137|SPINT3|dJ601O1.1 serine peptidase inhibitor, Kunitz type 4 protein-coding 220663 chr19 24362105 24362803 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -199007 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 298580 chr11 50465916 50467041 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 57331 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 223649-2 chr12 71321596 71322507 + 614.904 NA Intergenic L1MA10|LINE|L1 -117747 NM_003667 8549 Hs.658889 NM_003667 ENSG00000139292 LGR5 FEX|GPR49|GPR67|GRP49|HG38 leucine rich repeat containing G protein-coupled receptor 5 protein-coding 183944-10 chr6 27453249 27453901 + 614.904 NA intron (NM_001347832, intron 5 of 5) intron (NM_001347832, intron 5 of 5) 19323 NM_001318892 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding 337582 chr11 84002631 84004149 + 614.904 NA intron (NM_001142699, intron 11 of 27) THE1D-int|LTR|ERVL-MaLR 269890 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 220048 chr1 43487742 43488488 + 614.904 NA Intergenic L1M4|LINE|L1 -34126 NM_001243526 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding 216973-2 chr10 67682983 67683721 + 614.904 NA intron (NM_013266, intron 1 of 17) L2a|LINE|L2 12843 NM_013266 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding 216797-2 chr14 65717869 65718638 + 614.904 NA intron (NR_038167, intron 7 of 8) L1M1|LINE|L1 247151 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA 327392 chr4 5086571 5087941 + 614.904 NA intron (NM_001306082, intron 1 of 12) L1MB7|LINE|L1 35776 NM_018401 55351 Hs.133062 NM_018401 ENSG00000152953 STK32B HSA250839|STK32|STKG6|YANK2 serine/threonine kinase 32B protein-coding 184823-2 chr5 141273428 141274188 + 614.904 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 28413 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 528114 chr9 113044025 113046227 + 614.904 NA intron (NM_003408, intron 3 of 3) intron (NM_003408, intron 3 of 3) 11598 NM_001282515 7539 Hs.150406 NM_003408 ENSG00000136866 ZFP37 ZNF906|zfp-37 ZFP37 zinc finger protein protein-coding 180167-4 chr18 24576390 24576812 + 614.904 NA Intergenic Intergenic -51581 NR_040033 729950 Hs.585850 NR_040033 ENSG00000265485 LINC01915 - long intergenic non-protein coding RNA 1915 ncRNA 184998-11 chrX 58444163 58444869 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -533883 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 643804 chr8 139543657 139545897 + 614.904 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 158346 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 521614 chr18 108031 109601 + 614.904 NA promoter-TSS (NR_033770) promoter-TSS (NR_033770) -249 NR_033770 727758 Hs.585843 NR_033770 ENSG00000263006 ROCK1P1 ROCK1P Rho associated coiled-coil containing protein kinase 1 pseudogene 1 pseudo 351813-2 chr8 141483187 141484486 + 614.904 NA intron (NR_102364, intron 6 of 26) L1ME2|LINE|L1 23393 NR_160399 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding 217149 chr1 234336711 234337499 + 614.904 NA Intergenic L1MB4|LINE|L1 30638 NR_039818 100616380 NR_039818 ENSG00000264377 MIR4671 - microRNA 4671 ncRNA 379571 chr1 246987409 246988610 + 614.904 NA exon (NM_020394, exon 4 of 4) exon (NM_020394, exon 4 of 4) 20048 NM_001204221 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding 178937-3 chr16 82354572 82355239 + 614.904 NA Intergenic Charlie5|DNA|hAT-Charlie -184681 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 285315 chr11 50618965 50620006 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 210338 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 338021 chr11 29792298 29793565 + 614.904 NA Intergenic (AAC)n|Simple_repeat|Simple_repeat 174129 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA 195188-7 chr8 138327335 138328280 + 614.904 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 169454 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 204939-4 chr5 30285214 30286110 + 614.904 NA Intergenic L1M2|LINE|L1 405102 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 196067 chr19 57980850 57981661 + 614.904 NA intron (NM_001348025, intron 6 of 6) MER77|LTR|ERVL -6721 NM_152474 147685 Hs.134209 NM_152474 ENSG00000177025 C19orf18 - chromosome 19 open reading frame 18 protein-coding 369557 chr20 46544260 46545530 + 614.904 NA intron (NM_080721, intron 2 of 2) intron (NM_080721, intron 2 of 2) 5759 NM_080721 128506 NM_080721 ENSG00000149635 OCSTAMP C20orf123|OC-STAMP|dJ257E24.3 osteoclast stimulatory transmembrane protein protein-coding 222771-3 chr7 68917132 68917888 + 614.904 NA Intergenic LOR1a|LTR|ERV1 680114 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA 212669-3 chr7 17699896 17700738 + 614.904 NA Intergenic L1MA9|LINE|L1 -141408 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA 232082 chr2 133707850 133709019 + 614.904 NA Intergenic Intergenic -139971 NM_207481 344148 Hs.537329 NM_207363 ENSG00000176771 NCKAP5 ERIH1|ERIH2|NAP5 NCK associated protein 5 protein-coding 228481 chr15 67685229 67685895 + 614.904 NA intron (NM_001206804, intron 13 of 21) L1MEc|LINE|L1 136468 NM_001206804 5607 Hs.114198 NM_002757 ENSG00000137764 MAP2K5 HsT17454|MAPKK5|MEK5|PRKMK5 mitogen-activated protein kinase kinase 5 protein-coding 351637 chr4 74019476 74021009 + 614.904 NA Intergenic Intergenic 18447 NM_002090 2921 Hs.89690 NM_002090 ENSG00000163734 CXCL3 CINC-2b|GRO3|GROg|MIP-2b|MIP2B|SCYB3 C-X-C motif chemokine ligand 3 protein-coding 263794 chr19 43890730 43891621 + 614.904 NA TTS (NR_038334) TTS (NR_038334) 10628 NR_038334 100505715 Hs.76561 NR_038334 ENSG00000267058 LOC100505715 - uncharacterized LOC100505715 ncRNA 500004 chr2 41494915 41496757 + 614.904 NA Intergenic HUERS-P3-int|LTR|ERV1 -381719 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 247279 chr7 3629880 3630617 + 614.904 NA intron (NM_152744, intron 2 of 44) L1MEc|LINE|L1 328996 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 373774 chr14 68614057 68615208 + 614.904 NA intron (NM_001321818, intron 10 of 10) L1MB7|LINE|L1 14155 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 177795-6 chr8 77031616 77032015 + 614.904 NA Intergenic Intergenic -30771 NM_001172086 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 184822-2 chr10 22172053 22172753 + 614.904 NA Intergenic L1PREC2|LINE|L1 37580 NM_001199938 340900 Hs.450519 NM_001199938 ENSG00000223601 EBLN1 EBLN-1 endogenous Bornavirus like nucleoprotein 1 protein-coding 491659 chr5 35556723 35558163 + 614.904 NA Intergenic L1M3b|LINE|L1 -60420 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding 291376 chr6 40107829 40108657 + 614.904 NA Intergenic Intergenic -173781 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 201952-2 chr11 71176480 71177181 + 614.904 NA intron (NM_012309, intron 1 of 24) L1MEc|LINE|L1 47966 NM_012309 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding 304729 chr10 41813062 41814133 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 554448 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 337055 chr14 68351095 68352250 + 614.904 NA intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 277115 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 218115-5 chr4 60304431 60305218 + 614.904 NA Intergenic Intergenic -617795 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 318256 chr16 82322512 82323675 + 614.904 NA Intergenic L1M2|LINE|L1 -152869 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 1.06572e+06 chr19 30181044 30184271 + 614.904 NA Intergenic L1MEf|LINE|L1 -189727 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 486565 chr20 47692064 47693906 + 614.904 NA intron (NM_198596, intron 4 of 20) L1MC4a|LINE|L1 93079 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding 401971 chr5 150912407 150913837 + 614.904 NA Intergenic L1M3de|LINE|L1 -8139 NM_001172831 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 197911-5 chr16 68577591 68578510 + 614.904 NA Intergenic AluSx1|SINE|Alu 38759 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 238056-2 chr16 68565051 68566092 + 614.904 NA non-coding (NR_130978, exon 5 of 5) non-coding (NR_130978, exon 5 of 5) 26280 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 208979-3 chr19 43981003 43981748 + 614.904 NA Intergenic L1MC4a|LINE|L1 -2795 NM_001260488 7711 Hs.279567 NM_003445 ENSG00000204920 ZNF155 pHZ-96 zinc finger protein 155 protein-coding 195364-6 chr8 138363466 138364096 + 614.904 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 133480 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 229447-4 chr5 57097558 57098267 + 614.904 NA Intergenic LTR10A|LTR|ERV1 -76036 NM_001331037 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding 387740 chr3 4100807 4102894 + 614.904 NA Intergenic THE1C|LTR|ERVL-MaLR -201454 NM_001320678 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding 236211-3 chr12 7744211 7745217 + 614.904 NA intron (NM_203503, intron 2 of 5) AluJr|SINE|Alu 2661 NM_001371390 229886-5 chr19 53141383 53142577 + 614.904 NA exon (NM_001172674, exon 5 of 5) exon (NM_001172674, exon 5 of 5) -9060 NM_001352138 55786 Hs.147765 NM_018355 ENSG00000170954 ZNF415 Pact|ZfLp zinc finger protein 415 protein-coding 442467 chr18 5804057 5805908 + 614.904 NA Intergenic MSTB1|LTR|ERVL-MaLR -35713 NR_039772 100616244 NR_039772 ENSG00000272380 MIR3976 - microRNA 3976 ncRNA 207310-5 chr8 138396557 138397489 + 614.904 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 100238 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 192026-7 chr9 112986699 112987582 + 614.904 NA Intergenic L1MB7|LINE|L1 25052 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding 202655-6 chr8 124934514 124935452 + 614.904 NA Intergenic L1MC5a|LINE|L1 -7025 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA 294451 chr11 76586266 76587601 + 614.904 NA Intergenic L1M5|LINE|L1 83005 NM_001370188 2615 Hs.151641 NM_005512 ENSG00000137507 LRRC32 D11S833E|GARP leucine rich repeat containing 32 protein-coding 301478 chr20 63145344 63146722 + 614.904 NA Intergenic L1ME2|LINE|L1 -32467 NR_029670 406909 NR_029670 ENSG00000207598 MIR124-3 MIRN124-3|MIRN124A3|mir-124-3 microRNA 124-3 ncRNA 194397-2 chr19 53149996 53150657 + 614.904 NA intron (NM_001172675, intron 2 of 4) MER21B|LTR|ERVL 8727 NM_032584 84671 Hs.467239 NM_032584 ENSG00000197937 ZNF347 ZNF1111 zinc finger protein 347 protein-coding 582050 chr14 81968020 81970408 + 614.904 NA Intergenic LTR40a|LTR|ERVL -226076 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 224615-2 chr2 132730970 132731870 + 614.904 NA intron (NM_207481, intron 15 of 17) intron (NM_207481, intron 15 of 17) -59894 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding 306661 chr9 130789443 130790592 + 614.904 NA intron (NM_007313, intron 1 of 10) L1MEd|LINE|L1 -45237 NM_005157 25 Hs.431048 NM_005157 ENSG00000097007 ABL1 ABL|CHDSKM|JTK7|bcr/abl|c-ABL|c-ABL1|p150|v-abl ABL proto-oncogene 1, non-receptor tyrosine kinase protein-coding 449495 chr11 50486590 50488705 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 78500 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 187985-3 chr8 137229900 137230839 + 614.904 NA Intergenic Intergenic 183219 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 203972-6 chr3 26097780 26098507 + 614.904 NA Intergenic LTR16C|LTR|ERVL -224448 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA 179288-6 chr8 144560341 144561154 + 614.904 NA intron (NM_025251, intron 2 of 10) Cheshire|DNA|hAT-Charlie -31636 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding 244819 chr16 52014720 52015622 + 614.904 NA Intergenic Intergenic 58764 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding 503255 chr12 33188228 33190466 + 614.904 NA Intergenic L1MEc|LINE|L1 250472 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding 393451 chr21 27687862 27689320 + 614.904 NA Intergenic L1M4|LINE|L1 -33788 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 241306 chr18 12541341 12542514 + 614.904 NA intron (NM_020148, intron 3 of 15) MER33|DNA|hAT-Charlie 109153 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA 448176 chr19 37609578 37611254 + 614.904 NA intron (NM_001172225, intron 4 of 4) L2c|LINE|L2 15540 NM_001172226 163255 Hs.728927 NM_152606 ENSG00000171817 ZNF540 Nbla10512 zinc finger protein 540 protein-coding 525040 chr2 113000010 113001870 + 614.904 NA Intergenic L1MEg|LINE|L1 -4519 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding 187721 chr11 79803242 79804077 + 614.904 NA Intergenic Intergenic -362629 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding 367185 chr20 39187531 39188739 + 614.904 NA Intergenic L3|LINE|CR1 36613 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 299634 chr10 44075232 44076174 + 614.904 NA Intergenic Tigger4a|DNA|TcMar-Tigger 163301 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 218642-4 chr19 28755938 28756670 + 614.904 NA Intergenic L1PA13|LINE|L1 -28610 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo 315094-2 chr8 138415566 138416622 + 614.904 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 81167 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 331169-2 chr5 178933835 178935045 + 614.904 NA Intergenic Intergenic -6758 NM_001323307 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 420770 chr11 13187085 13188783 + 614.904 NA Intergenic Intergenic -88718 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding 222068 chr10 48676808 48677640 + 614.904 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -7649 NM_001370154 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding 304465 chr5 46244592 46245738 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -548785 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 333014 chr5 52096859 52097944 + 614.904 NA Intergenic L1MC1|LINE|L1 89370 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA 298755-2 chr3 44711221 44712383 + 614.904 NA promoter-TSS (NM_001134442) promoter-TSS (NM_001134442) -841 NM_001282880 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 199317-4 chr19 43870446 43871315 + 614.904 NA Intergenic L1MEf|LINE|L1 9256 NM_001033719 342908 Hs.76561 NM_001033719 ENSG00000176222 ZNF404 - zinc finger protein 404 protein-coding 426480 chr2 66352893 66354443 + 614.904 NA Intergenic Intergenic 4660 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA 235684-6 chr7 25976817 25977487 + 614.904 NA Intergenic Intergenic -27166 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA 795158 chr12 34422657 34425794 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 401729 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 219345-3 chr2 117597315 117598280 + 614.904 NA Intergenic Intergenic -216894 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 202918-3 chr2 56698238 56698775 + 614.904 NA Intergenic Intergenic -512736 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 196242-3 chr19 52447519 52448508 + 614.904 NA intron (NM_001291368, intron 4 of 4) L1MD|LINE|L1 -5540 NM_001099694 147660 Hs.157287 NM_152472 ENSG00000258405 ZNF578 - zinc finger protein 578 protein-coding 314567 chr14 53140459 53141610 + 614.904 NA intron (NM_030637, intron 1 of 11) L1MCc|LINE|L1 12289 NM_030637 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding 213723-3 chr2 213669050 213669918 + 614.904 NA intron (NR_047660, intron 9 of 14) intron (NR_047660, intron 9 of 14) -88583 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA 249124-2 chr9 96760742 96761551 + 614.904 NA intron (NM_001314060, intron 4 of 4) intron (NM_001314060, intron 4 of 4) 16941 NM_001314060 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding 230062-2 chr10 41768851 41769640 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 598800 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 178849-7 chr2 163242933 163243488 + 614.904 NA Intergenic Charlie7|DNA|hAT-Charlie -404443 NM_173162 90134 Hs.657413 NM_033272 ENSG00000184611 KCNH7 ERG3|HERG3|Kv11.3 potassium voltage-gated channel subfamily H member 7 protein-coding 201688-2 chr14 45487153 45487813 + 614.904 NA Intergenic MLT1C|LTR|ERVL-MaLR 228119 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 178322-3 chr14 62518630 62519396 + 614.904 NA Intergenic L1PA13|LINE|L1 -379040 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 380801 chr11 78583593 78584596 + 614.904 NA Intergenic L1MEg|LINE|L1 -9230 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 278112 chr1 40495907 40496903 + 614.904 NA TTS (NM_001320179) TTS (NM_001320179) -12314 NM_001346952 64789 Hs.59584 NM_022774 ENSG00000164002 EXO5 C1orf176|DEM1|Exo V|hExo5 exonuclease 5 protein-coding 207135-3 chr18 10042125 10043048 + 614.904 NA Intergenic L1M4|LINE|L1 128570 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding 252286 chr20 40342710 40343505 + 614.904 NA Intergenic L1MA9|LINE|L1 338646 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 597071 chr8 122891584 122893841 + 614.904 NA intron (NM_001362797, intron 3 of 4) AluSx3|SINE|Alu 111057 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding 280132-2 chr6 66307871 66308610 + 614.904 NA Intergenic L1MDa|LINE|L1 520361 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 563691 chr5 9865158 9866859 + 614.904 NA intron (NR_027112, intron 4 of 12) L1MEg|LINE|L1 11631 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA 383524 chr12 37840525 37842090 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -475467 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 185964-2 chr14 58832791 58833520 + 614.904 NA intron (NR_110547, intron 1 of 5) intron (NR_110547, intron 1 of 5) 4867 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA 277673 chr20 42749558 42750506 + 614.904 NA intron (NM_133170, intron 6 of 31) intron (NM_133170, intron 6 of 31) 64549 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 219696-3 chr7 97707195 97707961 + 614.904 NA Intergenic L1PREC2|LINE|L1 -24508 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding 224703-4 chr6 140409932 140410989 + 614.904 NA Intergenic L1M4c|LINE|L1 205208 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA 190093-3 chr14 87649603 87650417 + 614.904 NA intron (NR_146551, intron 1 of 2) THE1D-int|LTR|ERVL-MaLR 5284 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA 190005-4 chr2 195955368 195956291 + 614.904 NA intron (NM_018897, intron 19 of 64) intron (NM_018897, intron 19 of 64) 113008 NM_018897 56171 Hs.97403 NM_018897 ENSG00000118997 DNAH7 - dynein axonemal heavy chain 7 protein-coding 228656-2 chr5 97903725 97904461 + 614.904 NA intron (NR_146299, intron 2 of 2) L1MCb|LINE|L1 63335 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA 269240 chr11 80494644 80495738 + 614.904 NA Intergenic Tigger7|DNA|TcMar-Tigger 267612 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 290410-2 chr8 139541835 139543023 + 614.904 NA Intergenic Intergenic 160694 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 433331 chr6 43955824 43957638 + 614.904 NA Intergenic L1M4a2|LINE|L1 -43854 NR_160956 221416 Hs.531926 NM_153246 ENSG00000181577 C6orf223 - chromosome 6 open reading frame 223 ncRNA 259314 chr1 29567481 29568243 + 614.904 NA Intergenic LTR49-int|LTR|ERV1 -217748 NR_110758 101928460 Hs.434659 NR_110758 ENSG00000230523 LINC01756 - long intergenic non-protein coding RNA 1756 ncRNA 244732-2 chr20 15997518 15998266 + 614.904 NA intron (NM_001351663, intron 15 of 17) L1MA9|LINE|L1 -12010 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA 241394-2 chr5 113765575 113766509 + 614.904 NA Intergenic MER34B|LTR|ERV1 252348 NM_022828 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding 237704-2 chr2 123853918 123854908 + 614.904 NA Intergenic AluSc|SINE|Alu 170761 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 318169 chrUn_KI270442v1 74930 76358 + 614.904 NA NA (AATGG)n|Simple_repeat|Simple_repeat NA NA 250617 chr20 2188479 2189625 + 614.904 NA Intergenic L1MB8|LINE|L1 -17876 NR_161305 388780 Hs.132163 NR_161305 LOC388780 - uncharacterized LOC388780 ncRNA 190532-14 chr8 136464462 136465187 + 614.904 NA Intergenic Intergenic -65974 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 320365-2 chr8 71576723 71578219 + 614.904 NA Intergenic L1ME1|LINE|L1 -29377 NM_001370336 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding 196945-2 chr19 52362499 52362934 + 614.904 NA intron (NM_001161425, intron 5 of 5) L1M4c|LINE|L1 -7207 NM_001145434 400713 Hs.502314 NM_001145434 ENSG00000221923 ZNF880 - zinc finger protein 880 protein-coding 691942 chr17 74142833 74145114 + 614.904 NA Intergenic MLT1A0|LTR|ERVL-MaLR -59705 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding 310087-2 chr8 87574320 87575343 + 614.904 NA Intergenic L1MEg|LINE|L1 299184 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 221892-2 chr13_KI270839v1_alt 18993 19943 + 614.904 NA NA Intergenic NA NA 180518-4 chr16 52045484 52046327 + 614.904 NA intron (NM_001242473, intron 2 of 5) L1MA9|LINE|L1 28030 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding 198614-6 chr9 113042893 113043833 + 614.904 NA exon (NM_001282515, exon 4 of 4) exon (NM_001282515, exon 4 of 4) 13361 NM_001282515 7539 Hs.150406 NM_003408 ENSG00000136866 ZFP37 ZNF906|zfp-37 ZFP37 zinc finger protein protein-coding 288653-3 chr2 123968579 123969994 + 614.904 NA Intergenic Intergenic 55888 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 582138 chr11 50567824 50569532 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 159531 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 184383-3 chr3 33971575 33972314 + 614.904 NA Intergenic Intergenic 173314 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 289268-3 chr5 6890008 6890898 + 614.904 NA Intergenic Intergenic -62532 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA 409701 chr17 58145346 58147021 + 614.904 NA Intergenic L1MB7|LINE|L1 -8971 NM_012374 26689 Hs.531188 NM_012374 ENSG00000141194 OR4D1 OR17-23|OR4D3|OR4D4P|TPCR16 olfactory receptor family 4 subfamily D member 1 protein-coding 494909 chr11 50427530 50429530 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 19383 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 572299 chr14 76600312 76603228 + 614.904 NA Intergenic MSTA|LTR|ERVL-MaLR -159698 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 223034 chr14 49150008 49150951 + 614.904 NA Intergenic Intergenic 435901 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 568259 chr2 118889899 118892109 + 614.904 NA Intergenic L1M8|LINE|L1 -42821 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding 255449-2 chr9 123829101 123830374 + 614.904 NA intron (NM_001352968, intron 2 of 18) L1ME3A|LINE|L1 100389 NM_024820 57706 Hs.744995 NM_020946 ENSG00000119522 DENND1A FAM31A|KIAA1608 DENN domain containing 1A protein-coding 208277-4 chr8 116313450 116314217 + 614.904 NA intron (NR_046215, intron 1 of 13) intron (NR_046215, intron 1 of 13) 11226 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA 227690 chr14 61962241 61963016 + 614.904 NA intron (NM_001367663, intron 1 of 7) L1MA10|LINE|L1 34933 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 284876 chr15 87255923 87257055 + 614.904 NA Intergenic MARNA|DNA|TcMar-Mariner -268063 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA 313864-3 chr8 100580054 100581037 + 614.904 NA intron (NM_152628, intron 12 of 13) MLT1J|LTR|ERVL-MaLR -20786 NM_001270379 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 241657 chr12 23462949 23464041 + 614.904 NA Intergenic L1MEg|LINE|L1 121091 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 379308 chr22 45570960 45572824 + 614.904 NA intron (NM_006486, intron 14 of 16) AluSg|SINE|Alu 33755 NR_131244 100506737 Hs.517692 NR_131244 ENSG00000238120 LINC01589 TCONS_00029353 long intergenic non-protein coding RNA 1589 ncRNA 218730-2 chr7 10759495 10760068 + 614.904 NA intron (NR_147499, intron 1 of 2) LTR10B1|LTR|ERV1 20163 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA 224176 chr2 57524615 57525915 + 614.904 NA Intergenic L1PB4|LINE|L1 -382386 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 205026-3 chr2 16344204 16344974 + 614.904 NA Intergenic L1MA4A|LINE|L1 294162 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA 444487 chr17 62336452 62337945 + 614.904 NA Intergenic AluSz6|SINE|Alu -33020 NM_001144933 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding 345576 chr1 227667685 227668911 + 614.904 NA intron (NR_102302, intron 5 of 5) Charlie13a|DNA|hAT-Charlie 29409 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 182011-2 chr4 22560877 22561480 + 614.904 NA Intergenic Intergenic -45112 NM_145290 166647 Hs.99195 NM_145290 ENSG00000152990 ADGRA3 GPR125|PGR21|TEM5L adhesion G protein-coupled receptor A3 protein-coding 192904-2 chr7 78861657 78862181 + 614.904 NA intron (NM_001301128, intron 2 of 20) intron (NM_001301128, intron 2 of 20) -147069 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA 289620-2 chr8 134928542 134929931 + 614.904 NA Intergenic Intergenic 79301 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 371402 chr2 95220421 95221799 + 614.904 NA Intergenic MIRc|SINE|MIR -53339 NM_001321070 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding 416290 chr11 50450212 50451718 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 41818 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 217852 chr12 133011484 133012398 + 614.904 NA 3' UTR (NM_001330513, exon 5 of 5) 3' UTR (NM_001330513, exon 5 of 5) 25281 NR_110091 101928597 Hs.638942 NR_110091 ENSG00000246394 ZNF84-DT - ZNF84 divergent transcript ncRNA 246664-6 chr22 34543719 34544517 + 614.904 NA Intergenic Intergenic 453798 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 268889-2 chr22 27701754 27702750 + 614.904 NA Intergenic Intergenic 99504 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding 319135-2 chr2 98976623 98977773 + 614.904 NA Intergenic L1M4b|LINE|L1 -40973 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding 223474 chr8 139481912 139482743 + 614.904 NA Intergenic Intergenic 220796 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 724181 chr5 131845982 131848907 + 614.904 NA intron (NM_001303622, intron 11 of 12) L1MB7|LINE|L1 -50427 NM_001346113 96459 Hs.591273 NM_133372 ENSG00000217128 FNIP1 - folliculin interacting protein 1 protein-coding 321682 chr14 69897452 69898796 + 614.904 NA intron (NM_001034852, intron 1 of 11) L1MCa|LINE|L1 18708 NM_022137 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding 346630-2 chr8 87277613 87278903 + 614.904 NA intron (NM_173538, intron 6 of 10) L1MEg|LINE|L1 411843 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 390376 chr12 16131633 16133192 + 614.904 NA Intergenic Intergenic 145273 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 179815-10 chr8 133610590 133611380 + 614.904 NA Intergenic Intergenic -39098 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 191938-5 chr2 80266954 80267579 + 614.904 NA intron (NM_001282598, intron 7 of 17) intron (NM_001282598, intron 7 of 17) 37486 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding 307803-2 chr20 63385866 63386964 + 614.904 NA Intergenic Intergenic -25019 NM_000744 1137 Hs.10734 NM_000744 ENSG00000101204 CHRNA4 BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4 cholinergic receptor nicotinic alpha 4 subunit protein-coding 239724-2 chr7 4369314 4370103 + 614.904 NA Intergenic AluJb|SINE|Alu -234871 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 216358-2 chr10 29719960 29720546 + 614.904 NA intron (NM_001323599, intron 1 of 38) L1MEc|LINE|L1 15548 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding 195803-8 chr7 46298054 46298937 + 614.904 NA Intergenic L1MDa|LINE|L1 -377223 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 209506-2 chr2 194985632 194986379 + 614.904 NA Intergenic L1MA4|LINE|L1 255410 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA 184471-8 chr5 141267412 141268032 + 614.904 NA Intergenic ERVL-E-int|LTR|ERVL 22327 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 193958-9 chr6 105713756 105714343 + 614.904 NA Intergenic L1ME1|LINE|L1 -310967 NM_002726 5550 Hs.436564 NM_002726 ENSG00000085377 PREP PE|PEP prolyl endopeptidase protein-coding 209067-3 chr20 2346847 2347602 + 614.904 NA Intergenic Intergenic -33677 NM_198994 343641 Hs.452039 NM_198994 ENSG00000166948 TGM6 SCA35|TG6|TGM3L|TGY|dJ734P14.3 transglutaminase 6 protein-coding 189566-2 chr21 30895785 30896694 + 614.904 NA Intergenic Intergenic -14659 NM_175858 337880 Hs.407654 NM_175858 ENSG00000182591 KRTAP11-1 HACL-1|HACL1|KAP11.1 keratin associated protein 11-1 protein-coding 210561 chr2 123804889 123805724 + 614.904 NA Intergenic L1MC|LINE|L1 219868 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 243941 chr10 34063585 34064601 + 614.904 NA Intergenic Charlie10|DNA|hAT-Charlie -291413 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 235245-2 chr9 32370519 32371298 + 614.904 NA Intergenic Intergenic -13695 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding 196769-2 chr2 49074205 49075182 + 614.904 NA intron (NM_000145, intron 1 of 9) L1MA5A|LINE|L1 15090 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA 525303 chr8 83319256 83321241 + 614.904 NA Intergenic Intergenic -83510 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 278903 chr12 14608858 14609792 + 614.904 NA intron (NR_120465, intron 2 of 5) L1M1|LINE|L1 -41442 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding 182714-6 chr22 34989311 34990016 + 614.904 NA intron (NR_138042, intron 1 of 4) intron (NR_138042, intron 1 of 4) 8253 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 215568-3 chr8 129601236 129602010 + 614.904 NA intron (NR_130917, intron 1 of 3) L1PA10|LINE|L1 -26605 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA 254658 chr10 59495852 59496734 + 614.904 NA Intergenic LTR19C|LTR|ERV1 -133112 NM_001347840 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding 246049-3 chr7 62677798 62678641 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 625837 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 211703-2 chr2 120408512 120409172 + 614.904 NA Intergenic L1M5|LINE|L1 57507 NR_027181 84931 Hs.334519 NM_032845 ENSG00000280409 LINC01101 - long intergenic non-protein coding RNA 1101 ncRNA 267307-2 chr8 81395070 81396217 + 614.904 NA Intergenic L1M3c|LINE|L1 51796 NM_001348381 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding 183241-3 chr12 55615130 55615631 + 614.904 NA Intergenic MLT1F2|LTR|ERVL-MaLR -21512 NM_206899 121130 Hs.554551 NM_206899 ENSG00000175398 OR10P1 OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701 olfactory receptor family 10 subfamily P member 1 protein-coding 267219-2 chr8 113911941 113913174 + 614.904 NA Intergenic Intergenic -475618 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 215304-3 chr15 101164194 101165202 + 614.904 NA Intergenic MLT1C|LTR|ERVL-MaLR 87350 NM_014918 22856 Hs.110488 NM_014918 ENSG00000131873 CHSY1 CHSY|CSS1|ChSy-1|TPBS chondroitin sulfate synthase 1 protein-coding 185525-3 chr16 3383107 3383628 + 614.904 NA exon (NM_001324341, exon 6 of 6) exon (NM_001324341, exon 6 of 6) -10699 NM_001190476 100463285 NM_001190476 ENSG00000232196 MTRNR2L4 HN4 MT-RNR2 like 4 protein-coding 602518 chr10 75442802 75445242 + 614.904 NA intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) 12398 NM_001305581 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 283559 chr19 37408703 37409816 + 614.904 NA Intergenic AluJo|SINE|Alu 38160 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding 177971-3 chr2 18633834 18634394 + 614.904 NA Intergenic L1PA11|LINE|L1 -44534 NM_001199104 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding 177532-5 chr8 46517920 46518713 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 99327 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 190181-7 chr6 76236804 76237372 + 614.904 NA Intergenic L1M3|LINE|L1 -164410 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 339076 chr4 64023321 64024923 + 614.904 NA Intergenic LTR19C|LTR|ERV1 385328 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 209506 chr17 74149299 74150043 + 614.904 NA Intergenic Intergenic -54007 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding 237353-2 chr10 41766529 41767551 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 601005 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 268274-2 chr5 180255622 180256259 + 614.904 NA intron (NM_001364608, intron 6 of 12) HAL1|LINE|L1 24668 NM_001308244 5601 Hs.484371 NM_002752 ENSG00000050748 MAPK9 JNK-55|JNK2|JNK2A|JNK2ALPHA|JNK2B|JNK2BETA|PRKM9|SAPK|SAPK1a|p54a|p54aSAPK mitogen-activated protein kinase 9 protein-coding 211351-3 chr8 138091229 138092121 + 614.904 NA Intergenic L1MEc|LINE|L1 -8130 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 537602 chr7 16106276 16108195 + 614.904 NA intron (NM_001101426, intron 9 of 9) L1MA7|LINE|L1 -103251 NR_038947 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA 261598-3 chr6 66309261 66310304 + 614.904 NA Intergenic Intergenic 521903 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 376848 chr19 32146106 32147467 + 614.904 NA Intergenic L1MDa|LINE|L1 -40870 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA 330291 chr10 52666863 52668077 + 614.904 NA intron (NR_155748, intron 1 of 2) MLT1H1|LTR|ERVL-MaLR 87934 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA 216270-3 chr7 8025413 8026000 + 614.904 NA intron (NM_138426, intron 3 of 7) L1M4|LINE|L1 56910 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding 222595 chr12 34617058 34617751 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 594908 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 339602 chr5 110221139 110222281 + 614.904 NA Intergenic Tigger3a|DNA|TcMar-Tigger 292205 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA 195188 chr10 82422865 82423317 + 614.904 NA intron (NR_163253, intron 3 of 10) intron (NR_163253, intron 3 of 10) -190171 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 294275 chr7 92868883 92870168 + 614.904 NA intron (NR_110087, intron 2 of 2) MLT2C1|LTR|ERVL -32898 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding 206168-2 chr9 96819309 96820212 + 614.904 NA exon (NM_001346991, exon 5 of 5) exon (NM_001346991, exon 5 of 5) 34754 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 203972 chr1 55241066 55241619 + 614.904 NA Intergenic L1MD2|LINE|L1 15701 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA 236299 chr3 110484161 110484994 + 614.904 NA Intergenic L1MDa|LINE|L1 585382 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA 192553-2 chr8 138438136 138438664 + 614.904 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 58861 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 476814 chr14 39557212 39559097 + 614.904 NA Intergenic MLT1B|LTR|ERVL-MaLR -125654 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 206081 chr8 126265817 126266459 + 614.904 NA Intergenic L1M5|LINE|L1 -59357 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 398721 chr11 50519777 50521394 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 111438 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 425777-3 chr2 54775065 54776693 + 614.904 NA intron (NM_001039753, intron 1 of 40) L1MC|LINE|L1 50867 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding 197384-5 chr17 34923877 34924797 + 614.904 NA Intergenic Kanga1a|DNA|TcMar-Tc2 37123 NM_001193529 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding 327480 chr18 13317064 13318586 + 614.904 NA intron (NM_181482, intron 2 of 5) L1ME4a|LINE|L1 39720 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 502113 chr11 63099005 63100815 + 614.904 NA intron (NM_001136506, intron 5 of 9) L1MA3|LINE|L1 44311 NM_001136506 283238 Hs.375139 NM_173586 ENSG00000197658 SLC22A24 NET46 solute carrier family 22 member 24 protein-coding 210736-3 chr2 165081499 165082252 + 614.904 NA Intergenic L1MA8|LINE|L1 122175 NM_001081677 6328 Hs.435274 NM_006922 ENSG00000153253 SCN3A EIEE62|FFEVF4|NAC3|Nav1.3 sodium voltage-gated channel alpha subunit 3 protein-coding 205554-3 chr9 99925248 99926059 + 614.904 NA intron (NM_017919, intron 2 of 7) L1MEc|LINE|L1 18999 NM_017919 55014 Hs.704031 NM_017919 ENSG00000136874 STX17 - syntaxin 17 protein-coding 209946 chr10 31439056 31440064 + 614.904 NA intron (NM_001323646, intron 4 of 11) L2a|LINE|L2 -39805 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 225230-2 chr14 68134682 68135315 + 614.904 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 311406 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 237353 chr1 88633740 88634614 + 614.904 NA intron (NR_110682, intron 1 of 3) L1M2|LINE|L1 -49967 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding 314743-2 chr1 244578534 244579671 + 614.904 NA intron (NM_001130957, intron 11 of 21) Tigger2b_Pri|DNA|TcMar-Tigger -73946 NR_123736 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding 750182 chr15 71169188 71172157 + 614.904 NA intron (NR_120349, intron 1 of 1) L1MEc|LINE|L1 18387 NR_120350 101929196 Hs.680472 NR_120348 THSD4-AS1 - THSD4 antisense RNA 1 ncRNA 200634-2 chr15 93229266 93229930 + 614.904 NA Intergenic L1MEf|LINE|L1 23532 NM_001365393 105370980 NM_001365393 LOC105370980 - putative uncharacterized protein UNQ9370/PRO34162 protein-coding 255448 chr22 26817141 26818065 + 614.904 NA Intergenic Intergenic -42608 NR_146604 110091768 Hs.639900 NR_146604 LOC110091768 - uncharacterized LOC110091768 ncRNA 180606-4 chr5 123683246 123683992 + 614.904 NA Intergenic L1MD1|LINE|L1 138202 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 409965 chr5 33135664 33136709 + 614.904 NA Intergenic L1M3b|LINE|L1 -93549 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA 185525-4 chr18 80021548 80022099 + 614.904 NA intron (NM_001305564, intron 1 of 2) LTR25-int|LTR|ERV1 12113 NM_001305563 10907 Hs.465498 NM_006701 ENSG00000141759 TXNL4A BMKS|DIB1|DIM1|SNRNP15|TXNL4|U5-15kD thioredoxin like 4A protein-coding 379747 chr11 55060046 55061894 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -201185 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 228217-3 chr15 25316677 25317509 + 614.904 NA intron (NR_146177, intron 146 of 147) L1MA8|LINE|L1 38750 NR_001295 338428 NR_001295 ENSG00000274640 SNORD109A HBII-438A small nucleolar RNA, C/D box 109A snoRNA 211703 chr1 40498259 40499251 + 614.904 NA Intergenic AluSz6|SINE|Alu -9964 NM_001346952 64789 Hs.59584 NM_022774 ENSG00000164002 EXO5 C1orf176|DEM1|Exo V|hExo5 exonuclease 5 protein-coding 469434 chr10 39188027 39189858 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 492346 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 251495-2 chr2 188859203 188860039 + 614.904 NA Intergenic Intergenic -69498 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA 202479-2 chr5 91655044 91655922 + 614.904 NA Intergenic L1PB4|LINE|L1 -272166 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 206871-3 chr5 16408601 16409327 + 614.904 NA intron (NR_104625, intron 7 of 8) intron (NR_104625, intron 7 of 8) 32138 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA 323966 chr12 133156085 133157583 + 614.904 NA exon (NM_015394, exon 5 of 5) exon (NM_015394, exon 5 of 5) -24661 NM_001165881 10795 Hs.124047 NM_003415 ENSG00000090612 ZNF268 HZF3 zinc finger protein 268 protein-coding 367800 chr19 51861693 51862894 + 614.904 NA intron (NM_001370455, intron 5 of 6) intron (NM_001370455, intron 5 of 6) 25643 NM_001135590 84765 Hs.723015 NM_032679 ENSG00000161551 ZNF577 - zinc finger protein 577 protein-coding 387565 chr12 37933369 37934845 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -382667 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 448265 chr8 132385476 132387007 + 614.904 NA intron (NM_004519, intron 1 of 14) L1M6|LINE|L1 61021 NM_001204824 3786 Hs.374023 NM_004519 ENSG00000184156 KCNQ3 BFNC2|EBN2|KV7.3 potassium voltage-gated channel subfamily Q member 3 protein-coding 295417-2 chr2 226173178 226174161 + 614.904 NA intron (NR_046102, intron 4 of 6) intron (NR_046102, intron 4 of 6) 30875 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 467678 chr6 40175769 40177422 + 614.904 NA Intergenic Intergenic 179411 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 232873 chr16 12732514 12733347 + 614.904 NA intron (NM_018340, intron 2 of 3) HAL1|LINE|L1 12609 NR_039869 100616195 NR_039869 ENSG00000264733 MIR4718 - microRNA 4718 ncRNA 313864-4 chr8 119301427 119302697 + 614.904 NA Intergenic L1MA8|LINE|L1 -23109 NR_106755 102466162 NR_106755 ENSG00000276479 MIR548AZ hsa-mir-548az microRNA 548az ncRNA 225757 chr12 14610185 14610992 + 614.904 NA intron (NR_120465, intron 2 of 5) L1M1|LINE|L1 -42705 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding 219784 chr11 112643646 112644454 + 614.904 NA Intergenic Intergenic -88248 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 487971 chr19 56422563 56424430 + 614.904 NA exon (NM_001159861, exon 5 of 5) exon (NM_001159861, exon 5 of 5) 19164 NM_152478 147949 Hs.146854 NM_152478 ENSG00000198440 ZNF583 - zinc finger protein 583 protein-coding 204939-3 chr12 30220809 30221361 + 614.904 NA Intergenic Charlie2a|DNA|hAT-Charlie -436326 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding 231643 chr12 43555259 43556204 + 614.904 NA Intergenic MER20|DNA|hAT-Charlie -3528 NM_025003 80070 Hs.287554 NM_025003 ENSG00000173157 ADAMTS20 ADAM-TS20|ADAMTS-20|GON-1 ADAM metallopeptidase with thrombospondin type 1 motif 20 protein-coding 286809-5 chr22 39797239 39798419 + 614.904 NA intron (NM_152512, intron 5 of 6) L1M2|LINE|L1 95931 NM_152512 150350 Hs.474869 NM_152512 ENSG00000176177 ENTHD1 CACNA1I|dJ370M22.3 ENTH domain containing 1 protein-coding 221365 chr14 42800000 42801143 + 614.904 NA Intergenic Intergenic 1193715 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 341359-2 chr4 55534222 55535286 + 614.904 NA intron (NM_004898, intron 1 of 22) L1M5|LINE|L1 11178 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding 236914 chr17 16548838 16549723 + 614.904 NA 3' UTR (NM_001346167, exon 6 of 6) 3' UTR (NM_001346167, exon 6 of 6) 19924 NM_020653 57336 Hs.99724 NM_020653 ENSG00000141040 ZNF287 ZKSCAN13|ZSCAN45 zinc finger protein 287 protein-coding 301127 chr10 58902064 58903660 + 614.904 NA Intergenic L1MEg|LINE|L1 -96656 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA 228569-2 chr5 110181135 110182225 + 614.904 NA Intergenic MLT1H|LTR|ERVL-MaLR 298498 NR_033175 100289673 Hs.368405 NR_033175 LINC01848 - long intergenic non-protein coding RNA 1848 ncRNA 193782-4 chr8 53271160 53271797 + 614.904 NA Intergenic HERVIP10B3-int|LTR|ERV1 -19781 NM_001282904 4986 Hs.106795 NM_000912 ENSG00000082556 OPRK1 K-OR-1|KOR|KOR-1|OPRK opioid receptor kappa 1 protein-coding 256766-2 chr12 38002863 38003774 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -313456 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 551656 chr11 54815519 54818000 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 109927 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 218730-3 chr7 18080672 18081866 + 614.904 NA Intergenic L1MA8|LINE|L1 -5556 NM_001321868 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 334771 chr4 30681416 30682858 + 614.904 NA Intergenic Intergenic -38232 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 190181-9 chr9 96817263 96817910 + 614.904 NA 3' UTR (NM_001346991, exon 5 of 5) 3' UTR (NM_001346991, exon 5 of 5) 36928 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 297701-3 chrX 45494192 45495382 + 614.904 NA Intergenic L1MA2|LINE|L1 -10601 NR_104645 101927528 Hs.550772 NR_104644 ENSG00000229563 LINC01204 - long intergenic non-protein coding RNA 1204 ncRNA 363232 chr20 58490074 58491645 + 614.904 NA intron (NR_130908, intron 1 of 1) L1ME3F|LINE|L1 24079 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 269855-2 chr21 24178812 24179769 + 614.904 NA Intergenic Intergenic 142087 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA 279605-2 chr7 4355883 4357065 + 614.904 NA Intergenic L1MB5|LINE|L1 -221637 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 246928-3 chr5 14059722 14060811 + 614.904 NA Intergenic MIR|SINE|MIR -83076 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding 386862 chr3 10732906 10734216 + 614.904 NA Intergenic L1MEc|LINE|L1 30648 NR_152730 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA 190532-4 chr16 5701358 5702013 + 614.904 NA Intergenic AluSz6|SINE|Alu 69218 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA 395032 chr21 31572827 31574163 + 614.904 NA Intergenic Intergenic 14262 NM_001321023 150051 Hs.708976 NM_001321023 LOC150051 - uncharacterized LOC150051 protein-coding 491835-2 chr9 38168999 38170847 + 614.904 NA Intergenic Intergenic -100696 NM_003028 6461 Hs.521482 NM_003028 ENSG00000107338 SHB bA3J10.2 SH2 domain containing adaptor protein B protein-coding 264321-2 chr15 70230779 70231607 + 614.904 NA Intergenic HAL1ME|LINE|L1 -133276 NM_001282979 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding 254746-4 chr7 64512669 64513774 + 614.904 NA Intergenic LTR25-int|LTR|ERV1 49850 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding 234630 chr8 59221438 59222115 + 614.904 NA Intergenic L1MEc|LINE|L1 102566 NR_149031 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 596984 chr14 66958325 66960520 + 614.904 NA intron (NM_020806, intron 8 of 22) L1MB5|LINE|L1 -230018 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 265726-2 chr7 104320163 104321162 + 614.904 NA Intergenic Intergenic -7994 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding 431662 chr5 17438949 17440578 + 614.904 NA intron (NR_134273, intron 1 of 1) intron (NR_134273, intron 1 of 1) 3026 NR_134273 101929544 Hs.23725 NR_134273 ENSG00000248455 LINC02217 - long intergenic non-protein coding RNA 2217 ncRNA 317993 chr10 39233410 39234661 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 537439 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 235332 chr5 16251362 16252179 + 614.904 NA Intergenic L1MEg|LINE|L1 71529 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA 275652 chr5 58713958 58715093 + 614.904 NA intron (NM_138453, intron 2 of 4) L1MEd|LINE|L1 131450 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding 180430-12 chr9 71567463 71568078 + 614.904 NA Intergenic L1M4a1|LINE|L1 -120799 NM_001366144 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding 235157 chr13 99760330 99761032 + 614.904 NA intron (NR_120421, intron 3 of 4) L1M4c|LINE|L1 -31680 NR_120384 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA 250266 chr11 112916439 112917482 + 614.904 NA Intergenic Intergenic -44460 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding 369381-3 chr8 121961882 121963177 + 614.904 NA Intergenic L2a|LINE|L2 -321089 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 565009 chr20 54747042 54749448 + 614.904 NA Intergenic MSTB|LTR|ERVL-MaLR 272652 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 233400-3 chr5 46065313 46065857 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -369205 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 199141-7 chr8 135305031 135305605 + 614.904 NA Intergenic MIR3|SINE|MIR 71187 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 241306-3 chr6 152708074 152708849 + 614.904 NA intron (NM_025107, intron 1 of 1) FLAM_A|SINE|Alu 10566 NM_025107 80177 Hs.18160 NM_025107 ENSG00000120279 MYCT1 MTLC MYC target 1 protein-coding 517310 chr7 62733355 62735259 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 569749 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 496842 chr17 55597211 55599098 + 614.904 NA Intergenic L1MB2|LINE|L1 124710 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding 475057 chr8 136973001 136974564 + 614.904 NA Intergenic L1MD3|LINE|L1 439806 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 276531 chr8 119182472 119183476 + 614.904 NA Intergenic L1MB8|LINE|L1 -25389 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding 199580-2 chr2 101670328 101671133 + 614.904 NA Intergenic MSTA|LTR|ERVL-MaLR -26973 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding 289093 chr14 30763568 30764843 + 614.904 NA Intergenic L1ME1|LINE|L1 -110330 NM_001135058 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding 179815 chr1 176157535 176158238 + 614.904 NA intron (NM_001286644, intron 3 of 17) L1MEf|LINE|L1 49358 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding 247718 chr10 37795422 37796215 + 614.904 NA promoter-TSS (NR_051997) promoter-TSS (NR_051997) -643 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo 555785 chr11 78580834 78583410 + 614.904 NA Intergenic Intergenic -7258 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 198087-2 chr19 34886169 34887083 + 614.904 NA Intergenic L1MB4|LINE|L1 12317 NR_046222 100652909 Hs.374015 NR_046222 ENSG00000271649 LINC00904 - long intergenic non-protein coding RNA 904 ncRNA 321858 chr15 60048661 60049717 + 614.904 NA Intergenic Intergenic 44878 NM_012182 27023 Hs.734475 NM_012182 ENSG00000171956 FOXB1 FKH5|HFKH-5 forkhead box B1 protein-coding 243765-3 chr16 3381443 3382128 + 614.904 NA TTS (NM_001324341) TTS (NM_001324341) -9117 NM_001190476 100463285 NM_001190476 ENSG00000232196 MTRNR2L4 HN4 MT-RNR2 like 4 protein-coding 344961 chr10 23572424 23573535 + 614.904 NA Intergenic L1ME4a|LINE|L1 -121748 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 277848 chr9 90823381 90824348 + 614.904 NA intron (NM_001174168, intron 1 of 12) L1MCb|LINE|L1 -3556 NM_001174167 6850 Hs.371720 NM_003177 ENSG00000165025 SYK p72-Syk spleen associated tyrosine kinase protein-coding 303148 chr7 42665506 42666654 + 614.904 NA intron (NR_110833, intron 2 of 2) L1ME3E|LINE|L1 40367 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA 561758 chr22 47500601 47502517 + 614.904 NA Intergenic L1ME1|LINE|L1 -14448 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LINC01644 LL22NC03-75H12.2 long intergenic non-protein coding RNA 1644 ncRNA 270997 chr16 68562736 68563594 + 614.904 NA non-coding (NR_130978, exon 5 of 5) non-coding (NR_130978, exon 5 of 5) 23874 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 262915 chr4 38440574 38441442 + 614.904 NA intron (NR_110951, intron 6 of 7) L1ME1|LINE|L1 -68759 NR_149076 106144599 Hs.582017 NR_149076 ENSG00000249667 LINC01259 TCONS_00007515 long intergenic non-protein coding RNA 1259 ncRNA 272842 chr7 3111221 3112285 + 614.904 NA Intergenic AluJr|SINE|Alu 46820 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA 290322 chr11 84113656 84114616 + 614.904 NA intron (NM_001142699, intron 9 of 27) Charlie1b|DNA|hAT-Charlie 159144 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 191674 chr14 45336328 45337036 + 614.904 NA Intergenic L1M2|LINE|L1 -83480 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 483578 chr5 32671101 32672732 + 614.904 NA Intergenic ERVL-E-int|LTR|ERVL -18956 NM_001364458 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding 271172 chr3 79628423 79629677 + 614.904 NA intron (NM_002941, intron 1 of 30) L1PB4|LINE|L1 121163 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA 185525-6 chr6 28199882 28200373 + 614.904 NA Intergenic Tigger7|DNA|TcMar-Tigger 18802 NR_002936 222699 Hs.161441 NR_002936 TOB2P1 TOB2P|TOB4p|p373c6.3 transducer of ERBB2, 2 pseudogene 1 pseudo 193958-5 chr19 52078527 52079202 + 614.904 NA intron (NM_001369827, intron 4 of 6) intron (NM_001369827, intron 4 of 6) 15407 NM_001352299 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding 313162 chr2 38643636 38645189 + 614.904 NA Intergenic AluSq|SINE|Alu -21702 NM_138801 130589 Hs.435012 NM_138801 ENSG00000143891 GALM BLOCK25|GLAT|HEL-S-63p|IBD1 galactose mutarotase protein-coding 535317 chr18 4574971 4577719 + 614.904 NA Intergenic L1PB4|LINE|L1 -121038 NM_004746 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding 297877 chr3 28099308 28100134 + 614.904 NA Intergenic L1M4b|LINE|L1 -141898 NM_001331187 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding 286721-5 chr8 141748444 141749244 + 614.904 NA Intergenic L1ME1|LINE|L1 37469 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 212054-6 chr6 5933136 5933941 + 614.904 NA Intergenic Intergenic 70506 NM_001278711 51299 Hs.103291 NM_016588 ENSG00000124785 NRN1 NRN|dJ380B8.2 neuritin 1 protein-coding 305519 chr5 121597202 121598444 + 614.904 NA Intergenic MER9a2|LTR|ERVK -254059 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding 317905 chr14 53838282 53839222 + 614.904 NA Intergenic MSTA-int|LTR|ERVL-MaLR 109732 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA 350319 chr16 79956998 79958446 + 614.904 NA Intergenic Intergenic 162473 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA 291728-2 chr8 100585781 100587143 + 614.904 NA intron (NM_152628, intron 11 of 13) intron (NM_152628, intron 11 of 13) -26703 NM_001270379 157567 Hs.530199 NM_198401 ENSG00000186106 ANKRD46 ANK-S|GENX-115279 ankyrin repeat domain 46 protein-coding 200195-4 chr8 134411630 134412435 + 614.904 NA Intergenic Intergenic -186039 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 380274 chr10 44548457 44550374 + 614.904 NA Intergenic MER51A|LTR|ERV1 -164318 NM_000609 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 368064 chr8 128207257 128208569 + 614.904 NA Intergenic Intergenic 57797 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 265023 chr2 79441028 79441928 + 614.904 NA Intergenic L2a|LINE|L2 59366 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 271436 chr2 205517847 205519053 + 614.904 NA intron (NM_205863, intron 20 of 21) L1PA14|LINE|L1 -164050 NM_201264 8828 Hs.471200 NM_003872 ENSG00000118257 NRP2 NP2|NPN2|PRO2714|VEGF165R2 neuropilin 2 protein-coding 457312 chr19 58114029 58115614 + 614.904 NA intron (NR_027135, intron 1 of 1) L1MC4|LINE|L1 3605 NR_027135 65982 Hs.235390 NM_023926 ENSG00000121413 ZSCAN18 ZNF447 zinc finger and SCAN domain containing 18 protein-coding 268010 chr10 71114605 71115571 + 614.904 NA Intergenic L1MEc|LINE|L1 -97482 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding 317554 chr19 27567721 27568813 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -225164 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 232785 chr11 54970375 54971202 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 263956 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 241394 chr4 33700176 33701219 + 614.904 NA Intergenic L2a|LINE|L2 339196 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 418222 chr2 156237052 156238813 + 614.904 NA intron (NR_110250, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 16999 NR_110249 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 203182-2 chr5 6307485 6308463 + 614.904 NA Intergenic Intergenic 29318 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 205817-3 chr18 12555846 12556572 + 614.904 NA intron (NM_020148, intron 2 of 15) L1MA3|LINE|L1 100523 NM_001128627 56907 Hs.515283 NM_020148 ENSG00000134278 SPIRE1 Spir-1 spire type actin nucleation factor 1 protein-coding 613937 chr9 40913186 40915896 + 614.904 NA Intergenic CER|Satellite|Satellite 14551 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA 308154-2 chr4 26113530 26114726 + 614.904 NA Intergenic Intergenic 199936 NM_001145432 389203 Hs.479386 NM_001145432 ENSG00000250317 SMIM20 C4orf52|MITRAC7|PNX small integral membrane protein 20 protein-coding 191059-3 chr2 103601997 103602586 + 614.904 NA Intergenic MLT1G1-int|LTR|ERVL-MaLR -617862 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 576165 chr21 28370160 28371894 + 614.904 NA Intergenic L1MA3|LINE|L1 -142360 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 179727 chr2 60182620 60183111 + 614.904 NA Intergenic Intergenic 200171 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 208452-3 chr2 62361353 62362167 + 614.904 NA Intergenic MLT1F2|LTR|ERVL-MaLR 144435 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding 257557 chr19 56442593 56443616 + 614.904 NA intron (NM_022103, intron 4 of 4) L1MB7|LINE|L1 34241 NM_001321356 63934 Hs.676605 NM_022103 ENSG00000198046 ZNF667 MIPU1 zinc finger protein 667 protein-coding 210121-4 chr8 135024394 135025183 + 614.904 NA Intergenic Intergenic 174853 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 295857 chr20 42144872 42146202 + 614.904 NA intron (NM_133170, intron 18 of 31) (ATAG)n|Simple_repeat|Simple_repeat -527160 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 252198-2 chr14 45473655 45474611 + 614.904 NA Intergenic Intergenic -220931 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 236562-3 chr2 157722784 157723576 + 614.904 NA Intergenic Intergenic -94316 NM_001111033 130399 Hs.562901 NM_145259 ENSG00000123612 ACVR1C ACVRLK7|ALK7 activin A receptor type 1C protein-coding 273456 chr18 7295592 7296729 + 614.904 NA Intergenic L1MB7|LINE|L1 65056 NM_001105581 339291 Hs.647588 NM_001105581 ENSG00000206422 LRRC30 - leucine rich repeat containing 30 protein-coding 289532 chr20 59799460 59800534 + 614.904 NA intron (NM_080672, intron 7 of 12) L1MEc|LINE|L1 78787 NM_183244 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 204236 chr20 22127653 22128748 + 614.904 NA Intergenic L1MA9|LINE|L1 74110 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA 386072 chr8 134443816 134444922 + 614.904 NA Intergenic Intergenic -153702 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 296647-2 chr19 27386511 27387838 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -406257 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 237528-2 chr15 72424512 72425279 + 614.904 NA intron (NR_135678, intron 1 of 3) L2c|LINE|L2 26590 NM_001080462 338949 Hs.446069 NM_001080462 ENSG00000187806 TMEM202 - transmembrane protein 202 protein-coding 231555 chr15 26251451 26252265 + 614.904 NA Intergenic L1MB3|LINE|L1 136045 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA 179640-6 chrUn_GL000216v2 57353 58023 + 614.904 NA NA (TTCCATTCCA)n|Simple_repeat|Simple_repeat NA NA 305344 chr5 33006504 33007668 + 614.904 NA Intergenic Charlie29a|DNA|hAT-Charlie 59643 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 194222-3 chr16 86165781 86166398 + 614.904 NA Intergenic MLT1G1-int|LTR|ERVL-MaLR -30092 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA 506153 chr1 14040810 14042586 + 614.904 NA Intergenic HAL1|LINE|L1 292283 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding 253252-3 chr5 162857947 162858950 + 614.904 NA Intergenic L1MB8|LINE|L1 -579123 NM_001364023 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding 304289 chr2 123006079 123007048 + 614.904 NA Intergenic L1M2|LINE|L1 66918 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 410668 chr2 34221599 34223400 + 614.904 NA intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 155273 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 179200-3 chr2 229240998 229241632 + 614.904 NA intron (NM_001330158, intron 1 of 3) L1M4a1|LINE|L1 -9223 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 275038 chr14 46554306 46555508 + 614.904 NA Intergenic L1PA15-16|LINE|L1 83548 NR_102700 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 549812 chr8 130397595 130399717 + 614.904 NA intron (NM_001247996, intron 2 of 30) MIR|SINE|MIR 45004 NM_001247996 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 218115-7 chr7 12057073 12057737 + 614.904 NA Intergenic L1M2|LINE|L1 -153889 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding 231204 chr4 35795277 35796044 + 614.904 NA Intergenic L1MA6|LINE|L1 448279 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 264409 chr12 124065870 124066899 + 614.904 NA intron (NM_001347902, intron 2 of 4) MLT1E1|LTR|ERVL-MaLR 93169 NM_001347902 100533183 Hs.524828 NM_001204299 ENSG00000178882 ZNF664-RFLNA - ZNF664-RFLNA readthrough protein-coding 310087 chr16 50515219 50516463 + 614.904 NA Intergenic L1MA9|LINE|L1 -32555 NM_033119 85407 Hs.187578 NM_033119 ENSG00000140807 NKD1 Naked1 NKD inhibitor of WNT signaling pathway 1 protein-coding 268976 chr20 3494634 3495619 + 614.904 NA intron (NM_001323332, intron 1 of 25) intron (NM_001323332, intron 1 of 25) 24108 NM_139321 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding 189742 chr11 48706369 48706919 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 217851 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding 276619-4 chr6 52032374 52033329 + 614.904 NA intron (NM_138694, intron 29 of 66) intron (NM_138694, intron 29 of 66) 54762 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding 346191 chr11 3364719 3365927 + 614.904 NA intron (NR_046381, intron 4 of 6) L1M4c|LINE|L1 13823 NM_001256823 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding 273369 chr19 44255548 44256583 + 614.904 NA Intergenic L1M4|LINE|L1 -3815 NM_001330529 353355 Hs.466891 NM_181756 ENSG00000159915 ZNF233 - zinc finger protein 233 protein-coding 302357-3 chr8 59954427 59955266 + 614.904 NA Intergenic MLT1D|LTR|ERVL-MaLR 326554 NM_001321838 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding 180518-8 chr7 64719719 64720401 + 614.904 NA Intergenic L1PA17|LINE|L1 40996 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 196154 chr12 34572725 34573403 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 550568 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 338548 chr5 42148825 42149949 + 614.904 NA Intergenic THE1D-int|LTR|ERVL-MaLR 25958 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 202567 chr4 7579582 7580482 + 614.904 NA intron (NM_020777, intron 3 of 26) intron (NM_020777, intron 3 of 26) 120004 NR_036238 100422826 NR_036238 ENSG00000266690 MIR4274 - microRNA 4274 ncRNA 566238 chr5 83453379 83455236 + 614.904 NA Intergenic L1MA9|LINE|L1 -17367 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding 204324-3 chr14 45782964 45783683 + 614.904 NA Intergenic L1MA7|LINE|L1 -67721 NR_146547 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 312810 chr19 34758535 34759836 + 614.904 NA exon (NM_001007248, exon 4 of 4) exon (NM_001007248, exon 4 of 4) 14030 NM_001007248 148103 Hs.590961 NM_001007247 ENSG00000153896 ZNF599 - zinc finger protein 599 protein-coding 213020-5 chr8 107766840 107767573 + 614.904 NA Intergenic Intergenic -269288 NM_001199859 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding 194310-3 chr2 78044083 78044751 + 614.904 NA intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) -44313 NR_110287 101927948 Hs.639404 NR_110287 ENSG00000229494 LOC101927948 - uncharacterized LOC101927948 ncRNA 206432 chr10 83733783 83734537 + 614.904 NA Intergenic L1MA8|LINE|L1 -57071 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 202655-4 chr2 54804872 54805496 + 614.904 NA intron (NM_001039753, intron 1 of 40) L1ME1|LINE|L1 80172 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding 546034 chr5 46293229 46294896 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -597682 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 183505-5 chr17 40724900 40725803 + 614.904 NA Intergenic Looper|DNA|PiggyBac -21599 NM_019016 192666 Hs.87383 NM_019016 ENSG00000167916 KRT24 K24|KA24 keratin 24 protein-coding 214074-4 chr7 36665029 36665876 + 614.904 NA intron (NM_001177507, intron 2 of 19) L1MCa|LINE|L1 59042 NM_001637 313 Hs.488007 NM_001637 ENSG00000136250 AOAH - acyloxyacyl hydrolase protein-coding 460563 chr19 36511675 36513370 + 614.904 NA 3' UTR (NM_001166037, exon 3 of 3) 3' UTR (NM_001166037, exon 3 of 3) 15749 NM_001166036 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding 275038-2 chr5 63478670 63479777 + 614.904 NA Intergenic L1M4|LINE|L1 483069 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding 207925 chr2 239172274 239172886 + 614.904 NA intron (NM_006037, intron 5 of 26) L1ME3A|LINE|L1 22877 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA 199317-7 chr7 54908812 54909634 + 614.904 NA Intergenic L1MEc|LINE|L1 -109794 NM_001346941 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding 199932 chr8 108313730 108314351 + 614.904 NA Intergenic Intergenic -65323 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding 254482-5 chr8 135142358 135143492 + 614.904 NA Intergenic Intergenic -91206 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 251496-2 chr14 70544240 70545022 + 614.904 NA Intergenic L1M5|LINE|L1 -9627 NM_003814 8748 Hs.177984 NM_003814 ENSG00000134007 ADAM20 - ADAM metallopeptidase domain 20 protein-coding 327744 chr10 90494504 90495476 + 614.904 NA intron (NR_110657, intron 2 of 6) L1M3de|LINE|L1 45815 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA 222419-3 chr6 40203269 40204188 + 614.904 NA Intergenic L1MA9|LINE|L1 152278 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 642223 chr8 145036357 145038890 + 614.904 NA Intergenic L1MC4|LINE|L1 -14844 NM_023080 65265 Hs.169615 NM_023080 ENSG00000182307 C8orf33 - chromosome 8 open reading frame 33 protein-coding 452042 chr5 60870547 60872374 + 614.904 NA Intergenic Intergenic -27186 NM_001104558 79993 Hs.274256 NM_024930 ENSG00000164181 ELOVL7 - ELOVL fatty acid elongase 7 protein-coding 440710 chr15 27522454 27524152 + 614.904 NA intron (NM_033223, intron 7 of 9) intron (NM_033223, intron 7 of 9) -361984 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 305432 chr5 45992010 45993335 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -296292 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 322122 chr14 19890677 19891944 + 614.904 NA Intergenic L1PB4|LINE|L1 15042 NM_001005501 390431 Hs.551345 NM_001005501 ENSG00000165762 OR4K2 OR14-15 olfactory receptor family 4 subfamily K member 2 protein-coding 190532-2 chr10 111037806 111038506 + 614.904 NA Intergenic L1MC4|LINE|L1 -38873 NM_000681 150 Hs.249159 NM_000681 ENSG00000150594 ADRA2A ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32 adrenoceptor alpha 2A protein-coding 182011-3 chr5 92346085 92346546 + 614.904 NA Intergenic (ATATATATA)n|Simple_repeat|Simple_repeat -962998 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 325284 chr8 46511448 46512743 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr 105548 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 212054 chr10 76710605 76711361 + 614.904 NA Intergenic Intergenic -177061 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 227426 chr8 130930581 130931322 + 614.904 NA intron (NM_001115, intron 5 of 17) L1MA8|LINE|L1 109958 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 410493 chr11 80228487 80230042 + 614.904 NA Intergenic L1MA6|LINE|L1 533539 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 216534-8 chr8 118159905 118160803 + 614.904 NA intron (NR_146234, intron 4 of 5) L1ME2|LINE|L1 -48535 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 228129 chr19 36813332 36814100 + 614.904 NA intron (NR_040028, intron 2 of 3) L1ME3G|LINE|L1 16153 NR_040028 284408 Hs.570010 NR_040027 ENSG00000267254 ZNF790-AS1 - ZNF790 antisense RNA 1 ncRNA 261773 chr4 49153139 49154049 + 614.904 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 166952 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 186316-6 chr6 61518883 61519527 + 614.904 NA Intergenic ALR/Alpha|Satellite|centr -54925 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 178059 chr14 47353625 47354139 + 614.904 NA intron (NM_001113498, intron 1 of 16) L1M3|LINE|L1 -10636 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 218379-2 chr5 42682022 42682870 + 614.904 NA intron (NM_001242403, intron 3 of 9) intron (NM_001242403, intron 3 of 9) -74372 NM_001134848 100129792 Hs.745017 NM_001134848 ENSG00000198865 CCDC152 CH5400 coiled-coil domain containing 152 protein-coding 302445 chr18 79932173 79933171 + 614.904 NA intron (NM_001146345, intron 3 of 4) L1M4b|LINE|L1 18981 NM_001146343 80148 Hs.288284 NM_025078 ENSG00000122490 SLC66A2 PQLC1 solute carrier family 66 member 2 protein-coding 617275 chr14 69944709 69946762 + 614.904 NA intron (NM_001034852, intron 1 of 11) intron (NM_001034852, intron 1 of 11) -32398 NR_145786 109623479 NR_145786 SNORD169 - small nucleolar RNA, C/D box 169 snoRNA 191850 chr7 29992422 29993191 + 614.904 NA Intergenic Intergenic -2517 NM_001145514 9805 Hs.520740 NM_014766 ENSG00000136193 SCRN1 SES1 secernin 1 protein-coding 223913 chr1 113214406 113215255 + 614.904 NA Intergenic MSTA-int|LTR|ERVL-MaLR -8577 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA 318432 chr10 42532276 42533413 + 614.904 NA intron (NR_026777, intron 5 of 7) L1M4c|LINE|L1 20026 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo 188512-4 chr8 110226034 110226992 + 614.904 NA Intergenic L1MA7|LINE|L1 -250742 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 183944-7 chr2 33451612 33452161 + 614.904 NA intron (NM_170672, intron 2 of 18) L1M3c|LINE|L1 -6169 NM_001349979 25780 Hs.143674 NM_015376 ENSG00000152689 RASGRP3 GRP3 RAS guanyl releasing protein 3 protein-coding 327041 chr8 126220233 126221463 + 614.904 NA Intergenic MER41-int|LTR|ERV1 -104647 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 325460 chr2 34143875 34145433 + 527.06 NA intron (NR_126403, intron 4 of 5) MIRb|SINE|MIR 77428 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 187458 chr1 50281201 50281790 + 527.06 NA Intergenic L2c|LINE|L2 141948 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding 221277-5 chr5 24760256 24761215 + 527.06 NA Intergenic L1PB4|LINE|L1 79848 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA 311756-2 chr22 24905494 24907002 + 527.06 NA intron (NM_001098498, intron 20 of 23) L1MB7|LINE|L1 40447 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding 186404-4 chr22 47956354 47957098 + 527.06 NA Intergenic L1MD3|LINE|L1 -317638 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 321331 chr2 80655760 80657338 + 527.06 NA Intergenic L1MB4|LINE|L1 343170 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 194836 chr1 211171400 211172072 + 527.06 NA Intergenic MIRb|SINE|MIR -37588 NM_172362 3756 Hs.553187 NM_002238 ENSG00000143473 KCNH1 EAG|EAG1|Kv10.1|TMBTS|ZLS1|h-eag|hEAG1 potassium voltage-gated channel subfamily H member 1 protein-coding 204851-4 chr11 54829815 54830399 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 123275 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 321331-2 chr4 41724825 41726020 + 527.06 NA Intergenic Tigger16a|DNA|TcMar-Tigger 23548 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding 237528 chr12 34564542 34565370 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 542460 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 224791-2 chr12 112755939 112757058 + 527.06 NA intron (NM_001347952, intron 1 of 21) AluSp|SINE|Alu -35040 NM_001347953 22895 Hs.21239 NM_014954 ENSG00000089169 RPH3A - rabphilin 3A protein-coding 304729-2 chr8 118511563 118512841 + 527.06 NA intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -108799 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 193168-3 chr16 76743790 76744786 + 527.06 NA Intergenic Intergenic 109290 NR_110934 101928203 Hs.737035 NR_110934 ENSG00000250514 LINC02125 - long intergenic non-protein coding RNA 2125 ncRNA 287775 chr10 43516516 43517836 + 527.06 NA Intergenic LTR53-int|LTR|ERVL 51283 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 239461 chr1 67842173 67843194 + 527.06 NA intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) -9216 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding 177268-6 chr7 53885207 53885899 + 527.06 NA Intergenic Intergenic -73622 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 210648-3 chr2 96377436 96378267 + 527.06 NA TTS (NM_001281710) TTS (NM_001281710) 42085 NM_001281712 23397 Hs.308045 NM_015341 ENSG00000121152 NCAPH BRRN1|CAP-H|CAPH|MCPH23 non-SMC condensin I complex subunit H protein-coding 232170-7 chr8 83282871 83283683 + 527.06 NA Intergenic L1MB3|LINE|L1 -120481 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 190532-12 chr8 52357049 52358000 + 527.06 NA intron (NR_148195, intron 2 of 3) L1M4|LINE|L1 52232 NM_001352883 9705 Hs.655499 NM_014682 ENSG00000147488 ST18 NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387 ST18 C2H2C-type zinc finger transcription factor protein-coding 883616 chr7 7443784 7447020 + 527.06 NA intron (NM_001037763, intron 18 of 34) MLT1C|LTR|ERVL-MaLR 90471 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 211615-2 chr1 227607426 227608334 + 527.06 NA intron (NR_102302, intron 2 of 5) intron (NR_102302, intron 2 of 5) 44324 NM_001367910 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding 406451 chr2 24538644 24540164 + 527.06 NA intron (NM_001362952, intron 1 of 23) L2a|LINE|L2 -45073 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 182187-2 chr12 7737906 7738614 + 527.06 NA intron (NM_001371391, intron 3 of 5) MIRb|SINE|MIR 9115 NM_001371390 255888 chr19 36514261 36515267 + 527.06 NA exon (NM_001166037, exon 3 of 3) exon (NM_001166037, exon 3 of 3) 13507 NM_001166036 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding 227339-4 chr9 108627277 108628077 + 527.06 NA Intergenic Intergenic 228309 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding 179552-4 chr2 19465580 19466200 + 527.06 NA Intergenic Intergenic -107267 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding 200986-3 chr18 13199394 13200199 + 527.06 NA Intergenic L1MB3|LINE|L1 -18964 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 188424-7 chr5 97598120 97599018 + 527.06 NA intron (NR_105028, intron 2 of 3) L1MA7|LINE|L1 93873 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA 213284-2 chr2 223209745 223210432 + 527.06 NA Intergenic L1MA4A|LINE|L1 158158 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding 249299-2 chr8 139569365 139570220 + 527.06 NA Intergenic Intergenic 133331 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 403992 chr2 89812369 89814517 + 527.06 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -175536 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 210736-5 chr7 64695228 64695926 + 527.06 NA intron (NM_016220, intron 6 of 6) intron (NM_016220, intron 6 of 6) 16513 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 188863-2 chr18 10227380 10227960 + 527.06 NA Intergenic L1M4|LINE|L1 186700 NR_110775 101927350 Hs.572523 NR_110775 ENSG00000260913 LINC01254 - long intergenic non-protein coding RNA 1254 ncRNA 204939 chr10 21197456 21198158 + 527.06 NA Intergenic LTR26|LTR|ERV1 23505 NR_046284 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA 178498-6 chr20 21906048 21906536 + 527.06 NA Intergenic L1ME1|LINE|L1 -147798 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA 218906 chr11 50591155 50591943 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 182402 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 226285 chr6 52962798 52963661 + 527.06 NA Intergenic MER21-int|LTR|ERVL 32055 NM_001512 2941 Hs.485557 NM_001512 ENSG00000170899 GSTA4 GSTA4-4|GTA4 glutathione S-transferase alpha 4 protein-coding 273983 chr8 134220057 134220909 + 527.06 NA Intergenic L1PB3|LINE|L1 333987 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 213020-3 chr19 29173881 29174777 + 527.06 NA Intergenic L1MA2|LINE|L1 38822 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 220487-2 chr2 226177699 226178853 + 527.06 NA intron (NR_046102, intron 5 of 6) intron (NR_046102, intron 5 of 6) 35482 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 340042-2 chr7 80170447 80172090 + 527.06 NA intron (NM_001256414, intron 1 of 7) L4_B_Mam|LINE|RTE-X 35484 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding 185262-4 chr7 81258566 81259370 + 527.06 NA Intergenic L1MCa|LINE|L1 302851 NR_136264 105369146 Hs.730390 NR_136264 LOC105369146 - uncharacterized LOC105369146 ncRNA 183944-6 chr18 57673061 57673773 + 527.06 NA intron (NM_005603, intron 16 of 27) L1MC4|LINE|L1 43086 NM_001242804 100505549 Hs.660645 NM_001242804 LOC100505549 - uncharacterized LOC100505549 protein-coding 232873-2 chr18 77814148 77815104 + 527.06 NA Intergenic L2a|LINE|L2 179101 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA 257732-3 chr20 54757969 54759134 + 527.06 NA Intergenic L1MCb|LINE|L1 282958 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 204148-3 chr2 63272471 63273229 + 527.06 NA intron (NR_148704, intron 14 of 18) L1M2|LINE|L1 -153308 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 373159 chr2 172346333 172347679 + 527.06 NA Intergenic Intergenic -80330 NM_001316306 3655 Hs.133397 NM_000210 ENSG00000091409 ITGA6 CD49f|ITGA6B|VLA-6 integrin subunit alpha 6 protein-coding 180167-13 chr8 136386085 136387035 + 527.06 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -144238 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 216885-2 chr2 114145752 114146884 + 527.06 NA Intergenic Charlie1a|DNA|hAT-Charlie -166334 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA 203006 chr4 99372922 99373604 + 527.06 NA Intergenic L1MA2|LINE|L1 -20517 NM_000669 126 Hs.654537 NM_000669 ENSG00000248144 ADH1C ADH3 alcohol dehydrogenase 1C (class I), gamma polypeptide protein-coding 207837 chr1 34508185 34509086 + 527.06 NA Intergenic L2a|LINE|L2 161059 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 227690-4 chr8 138373933 138374858 + 527.06 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 122866 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 269767 chr2 154565505 154566682 + 527.06 NA Intergenic Intergenic -108655 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA 283646-2 chr6 40610133 40611222 + 527.06 NA Intergenic Intergenic -23313 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 200722-6 chr6 40069551 40070219 + 527.06 NA Intergenic Charlie7|DNA|hAT-Charlie -135423 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 276180 chr14 43002714 43003817 + 527.06 NA Intergenic HUERS-P3-int|LTR|ERV1 1396409 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 238143-2 chr2 102938878 102939589 + 527.06 NA Intergenic L1MEf|LINE|L1 -43511 NR_135562 105373518 Hs.738351 NR_135562 ENSG00000277527 LINC01796 - long intergenic non-protein coding RNA 1796 ncRNA 344785 chr5 45940934 45942397 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -245285 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 281626 chr16 72711791 72712956 + 527.06 NA Intergenic AluJb|SINE|Alu -47403 NR_159370 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA 180167-9 chr3 100155008 100155574 + 527.06 NA intron (NM_001167924, intron 2 of 9) HAL1|LINE|L1 -30533 NR_028357 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo 200722-7 chr6 40181706 40182663 + 527.06 NA Intergenic LTR37A|LTR|ERV1 173822 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 299722-2 chr9 40926832 40928246 + 527.06 NA Intergenic CER|Satellite|Satellite 1553 NR_031629 100302167 NR_031629 ENSG00000275377 MIR1299 MIRN1299|hsa-mir-1299 microRNA 1299 ncRNA 396525 chr5 96232349 96234203 + 527.06 NA intron (NR_130776, intron 1 of 4) L1ME3Cz|LINE|L1 154138 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA 195715-5 chr8 138364318 138364845 + 527.06 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 132680 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 223034-5 chr5 6863471 6864230 + 527.06 NA Intergenic Intergenic -35929 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA 197033-3 chr15 67346990 67347752 + 527.06 NA intron (NM_001031715, intron 6 of 20) L1ME1|LINE|L1 -92173 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding 188248-5 chr19 51916496 51917427 + 527.06 NA Intergenic Intergenic -10511 NM_001031721 79898 Hs.183390 NM_024840 ENSG00000176024 ZNF613 - zinc finger protein 613 protein-coding 238583-2 chr7 62982079 62982796 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 321619 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 201952-7 chr6 155929777 155930854 + 527.06 NA Intergenic L1MCa|LINE|L1 -16482 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA 237704 chr10 73319986 73320645 + 527.06 NA intron (NM_001367801, intron 10 of 27) intron (NM_001367801, intron 10 of 27) 38439 NM_001350933 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding 310263 chr12 25046005 25047445 + 527.06 NA intron (NM_001321724, intron 17 of 17) L1M3d|LINE|L1 -5503 NM_001366543 4033 Hs.124922 NM_006152 ENSG00000118308 LRMP JAW1 lymphoid restricted membrane protein protein-coding 181309-9 chr20 52507928 52508726 + 527.06 NA Intergenic L1MA3|LINE|L1 -112511 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 187282-4 chr6 70728381 70729142 + 527.06 NA intron (NM_001281440, intron 1 of 10) intron (NM_001281440, intron 1 of 10) 60231 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding 190357-2 chr11 121178674 121179392 + 527.06 NA intron (NM_005422, intron 19 of 22) L1MA4A|LINE|L1 76367 NM_005422 7007 Hs.248162 NM_005422 ENSG00000109927 TECTA DFNA12|DFNA8|DFNB21 tectorin alpha protein-coding 341711 chr6 57331694 57333362 + 527.06 NA intron (NM_000947, intron 5 of 13) L1MB5|LINE|L1 14898 NM_000947 5558 Hs.654580 NM_000947 ENSG00000146143 PRIM2 PRIM2A|p58 DNA primase subunit 2 protein-coding 209067-2 chr2 49532439 49533211 + 527.06 NA Intergenic L1M4|LINE|L1 -378298 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding 206432-7 chr6 17207036 17207695 + 527.06 NA Intergenic MLT1G1|LTR|ERVL-MaLR -73996 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding 220575-2 chr3 31471666 31472641 + 527.06 NA Intergenic L2a|LINE|L2 -60772 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding 206432-5 chr2 143657707 143658441 + 527.06 NA intron (NM_018460, intron 12 of 13) L3|LINE|CR1 -278993 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 197823-3 chr8 59175123 59175944 + 527.06 NA Intergenic Intergenic 56323 NR_149031 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 213020-2 chr17 65832930 65833634 + 527.06 NA intron (NM_001353129, intron 21 of 26) L1PA14|LINE|L1 -6739 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 233663-2 chr21 28379489 28380412 + 527.06 NA Intergenic L1ME4b|LINE|L1 -151283 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 197911-7 chr8 129570769 129571483 + 527.06 NA intron (NR_130917, intron 1 of 3) L1M4|LINE|L1 3892 NR_130919 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA 178586-6 chr3 84086178 84086913 + 527.06 NA Intergenic Intergenic 783030 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 403728 chr5 124152440 124154075 + 527.06 NA intron (NR_125774, intron 4 of 5) L1MD1|LINE|L1 285263 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 227339-3 chr4 43704743 43705572 + 527.06 NA Intergenic L1M2|LINE|L1 -212614 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 226460-3 chr7 62697586 62698603 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 605962 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 188600-4 chr11 30061059 30061732 + 527.06 NA Intergenic L1MB7|LINE|L1 -44365 NM_002233 3739 Hs.592002 NM_002233 ENSG00000182255 KCNA4 HBK4|HK1|HPCN2|HUKII|KCNA4L|KCNA8|KV1.4|MCIDDS|PCN2 potassium voltage-gated channel subfamily A member 4 protein-coding 216534-2 chr12 130294590 130295775 + 527.06 NA Intergenic MIR|SINE|MIR -42705 NM_001190971 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding 276092 chr19 36872914 36874044 + 527.06 NA intron (NM_001242476, intron 3 of 3) L1MA9|LINE|L1 21828 NM_001242476 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding 211790-6 chr4 31605969 31606801 + 527.06 NA Intergenic ERV24B_Prim-int|LTR|ERV1 99841 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA 370435 chr2 104809830 104811389 + 527.06 NA intron (NR_037883, intron 3 of 3) L1ME3A|LINE|L1 40867 NR_131235 100506421 Hs.437281 NR_037883 ENSG00000233639 PANTR1 LINC01158|linc-Brn1a|linc-POU3F3 POU3F3 adjacent non-coding transcript 1 ncRNA 360685-2 chr12 46282498 46283932 + 527.06 NA Intergenic L1MA4|LINE|L1 -14172 NM_001278388 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding 233312 chr1 113472472 113473375 + 527.06 NA intron (NM_001142782, intron 1 of 20) L1MA9|LINE|L1 82408 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 287863-2 chr8 118586837 118588097 + 527.06 NA intron (NR_109794, intron 1 of 4) intron (NR_109794, intron 1 of 4) -33534 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 426304 chr19 37125787 37127726 + 527.06 NA intron (NM_001329519, intron 4 of 4) intron (NM_001329519, intron 4 of 4) 45680 NM_199126 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding 420858 chr4 98764520 98766308 + 527.06 NA Intergenic L1MB7|LINE|L1 106512 NR_148380 105377342 Hs.122081 NR_148380 LOC105377342 - uncharacterized LOC105377342 ncRNA 177356-6 chr5 83315717 83316347 + 527.06 NA intron (NM_022550, intron 7 of 7) Tigger1|DNA|TcMar-Tigger -155642 NM_001164098 1462 Hs.643801 NM_004385 ENSG00000038427 VCAN CSPG2|ERVR|GHAP|PG-M|WGN|WGN1 versican protein-coding 297613 chr14 49382048 49383043 + 527.06 NA Intergenic Intergenic 203835 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 192113-3 chr20 56199555 56200322 + 527.06 NA Intergenic L2a|LINE|L2 -48794 NM_019888 4159 Hs.248018 NM_019888 ENSG00000124089 MC3R BMIQ9|MC3|MC3-R|OB20|OQTL melanocortin 3 receptor protein-coding 262037 chr1 53610279 53611071 + 527.06 NA intron (NM_001367484, intron 2 of 10) L1MEg|LINE|L1 123529 NM_147193 148979 Hs.306691 NM_147193 ENSG00000174332 GLIS1 - GLIS family zinc finger 1 protein-coding 242711-10 chr9 132697017 132698033 + 527.06 NA Intergenic L1MEg|LINE|L1 27061 NM_012204 9329 Hs.22302 NM_012204 ENSG00000125484 GTF3C4 KAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTA general transcription factor IIIC subunit 4 protein-coding 262300-4 chr5 178964625 178965516 + 527.06 NA exon (NM_182594, exon 5 of 5) exon (NM_182594, exon 5 of 5) 23872 NM_001323310 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 225406-4 chr2 114273930 114274665 + 527.06 NA Intergenic L1ME4b|LINE|L1 -168344 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 180782-4 chr8 48224800 48225587 + 527.06 NA Intergenic LTR12B|LTR|ERV1 216762 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding 226636 chr14 66739423 66740344 + 527.06 NA intron (NM_001024218, intron 2 of 21) L1MEd|LINE|L1 232476 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 210473-3 chr2 145704989 145705817 + 527.06 NA Intergenic L1MA9|LINE|L1 -881654 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 190269 chr12 118873956 118874816 + 527.06 NA Intergenic Intergenic -40850 NR_134997 105370016 Hs.550627 NR_134997 ENSG00000255814 LINC02439 - long intergenic non-protein coding RNA 2439 ncRNA 473739 chr19 27619965 27621674 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -172612 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 177444-7 chr9 111544947 111545676 + 527.06 NA 3' UTR (NM_133464, exon 6 of 6) 3' UTR (NM_133464, exon 6 of 6) 20132 NM_001007169 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding 301654-2 chr2 30702397 30703699 + 527.06 NA Intergenic L1ME1|LINE|L1 104398 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding 177619-2 chr17_GL000205v2_random 17484 18367 + 527.06 NA Intergenic CER|Satellite|Satellite 40041 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 267307 chr6 156204505 156205548 + 527.06 NA Intergenic L1MEg|LINE|L1 -173724 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA 207750-2 chr6 67457418 67458239 + 527.06 NA Intergenic Intergenic -597523 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 282416 chr8 142849069 142850475 + 527.06 NA Intergenic L1M4|LINE|L1 14971 NM_002066 2765 Hs.661218 NM_002066 ENSG00000104499 GML LY6DL glycosylphosphatidylinositol anchored molecule like protein-coding 207135-2 chr14 98793700 98794359 + 527.06 NA Intergenic (ATATAT)n|Simple_repeat|Simple_repeat 82416 NR_161367 283598 Hs.448754 NM_182560 ENSG00000176605 C14orf177 - chromosome 14 open reading frame 177 ncRNA 319486 chr5 3350480 3351805 + 527.06 NA Intergenic OldhAT1|DNA|hAT-Ac -101674 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA 290410 chr1 106309259 106310569 + 527.06 NA Intergenic L1MA4|LINE|L1 -281661 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA 246664-3 chr11 54897232 54898319 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 190943 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 261422-2 chr13 40874046 40875217 + 527.06 NA intron (NR_038259, intron 1 of 5) HERVE-int|LTR|ERV1 47119 NR_038258 100616668 Hs.660718 NR_038258 TPTE2P5 - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5 pseudo 295505 chr8 46865750 46866912 + 527.06 NA Intergenic Intergenic 25445 NR_027012 497634 Hs.406982 NR_027012 LINC00293 BEYLA|NCRNA00293 long intergenic non-protein coding RNA 293 ncRNA 278727-3 chr4 447417 448558 + 527.06 NA intron (NM_133474, intron 2 of 2) L1MA6|LINE|L1 26222 NR_002451 79963 Hs.677493 NM_024903 ENSG00000251595 ABCA11P ABCA11|EST1133530 ATP binding cassette subfamily A member 11, pseudogene pseudo 239197-2 chr5 46059407 46060225 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -363436 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 192289-10 chr8 138347413 138348113 + 527.06 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 149498 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 177707 chr11 31087910 31088725 + 527.06 NA intron (NM_001367979, intron 17 of 38) L1ME1|LINE|L1 -95631 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 249475 chr4 38297734 38298891 + 527.06 NA Intergenic L1M1|LINE|L1 -68602 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA 242272-2 chr2 22712948 22713985 + 527.06 NA Intergenic L1PA17|LINE|L1 176987 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 239197 chr1 154294339 154295083 + 527.06 NA Intergenic AluJb|SINE|Alu 22082 NM_001018837 10456 Hs.199625 NM_006118 ENSG00000143575 HAX1 HCLSBP1|HS1BP1|SCN3 HCLS1 associated protein X-1 protein-coding 299194 chr5 141366896 141368062 + 527.06 NA TTS (NM_032054) TTS (NM_032054) -2763 NM_018924 56102 Hs.368160 NM_018924 ENSG00000262209 PCDHGB3 PCDH-GAMMA-B3 protocadherin gamma subfamily B, 3 protein-coding 255097-4 chr22 48775313 48776490 + 527.06 NA Intergenic L1M7|LINE|L1 -4394 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA 361124 chr2 142488587 142490541 + 527.06 NA Intergenic Intergenic -357863 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding 181924-5 chr3 5544974 5545737 + 527.06 NA Intergenic L1MA8|LINE|L1 -295100 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 205378-6 chr19 56581704 56582600 + 527.06 NA 3' UTR (NM_001001668, exon 6 of 6) 3' UTR (NM_001001668, exon 6 of 6) -13144 NM_021216 58491 Hs.301431 NM_021216 ENSG00000197951 ZNF71 EZFIT zinc finger protein 71 protein-coding 261685 chr14 66617603 66618623 + 527.06 NA intron (NM_001024218, intron 1 of 21) L1M5|LINE|L1 110706 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 229798-3 chr7 113531207 113532214 + 527.06 NA Intergenic L1M2a|LINE|L1 387299 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding 227163-5 chr8 125458018 125458833 + 527.06 NA Intergenic L2c|LINE|L2 26216 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 180430 chr10 113599873 113600848 + 527.06 NA intron (NM_001322945, intron 34 of 40) AluJb|SINE|Alu 47307 NM_004132 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding 281626-2 chr3 191192681 191194051 + 527.06 NA Intergenic L1ME1|LINE|L1 -5875 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding 193168-2 chr16 73462571 73463418 + 527.06 NA Intergenic L1MD1|LINE|L1 76189 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 278639-2 chr4 33968649 33970246 + 527.06 NA intron (NR_125902, intron 3 of 4) L1MA7|LINE|L1 70446 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 409438 chr5 118248721 118250483 + 527.06 NA intron (NR_104997, intron 2 of 2) L1MA4A|LINE|L1 -32972 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA 204587-5 chr5 15246504 15247607 + 527.06 NA intron (NR_109944, intron 1 of 2) MER63A|DNA|hAT-Blackjack 19505 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA 246489 chr14 60370431 60371323 + 527.06 NA Intergenic MSTA-int|LTR|ERVL-MaLR 47681 NR_146481 101927729 NR_146481 ENSG00000258556 LINC02322 - long intergenic non-protein coding RNA 2322 ncRNA 267922 chr1 234145402 234146443 + 527.06 NA intron (NM_173508, intron 2 of 7) L1MEh|LINE|L1 -68289 NM_001300845 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding 245346 chr19 36542622 36543813 + 527.06 NA TTS (NM_001321351) TTS (NM_001321351) -14946 NM_001166037 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding 190357-4 chr12 46565079 46565756 + 527.06 NA intron (NR_125380, intron 3 of 3) L1MA5A|LINE|L1 181310 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA 186931-4 chr22 34937540 34938125 + 527.06 NA intron (NR_138042, intron 1 of 4) L1MA6|LINE|L1 60084 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 188775 chr10 39290846 39291399 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 594526 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 196154-2 chr19 24385068 24385799 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -221986 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 217852-3 chr4 44143355 44144155 + 527.06 NA Intergenic Chap1_Mam|DNA|hAT-Charlie 126693 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA 213196-3 chr8 49850752 49851303 + 527.06 NA Intergenic L1PA16|LINE|L1 -58769 NM_001287813 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding 223737-4 chr8 46295110 46295889 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 322144 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 188248-7 chr8 46301740 46302421 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 315563 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 183153-9 chr7 1775069 1775810 + 527.06 NA Intergenic L1MD2|LINE|L1 -33129 NR_120510 101927125 Hs.633957 NR_120508 ENSG00000236081 ELFN1-AS1 MYCLo-2 ELFN1 antisense RNA 1 ncRNA 194046-4 chr6 88834407 88835225 + 527.06 NA intron (NM_003800, intron 11 of 15) GA-rich|Low_complexity|Low_complexity 128802 NM_001286426 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding 189303-2 chr4 78226112 78226918 + 527.06 NA intron (NM_001166133, intron 2 of 41) L1MEg|LINE|L1 -62470 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA 200371-3 chr17 66817830 66818705 + 527.06 NA Intergenic Intergenic -16850 NM_145811 27091 Hs.278907 NM_014404 ENSG00000075429 CACNG5 - calcium voltage-gated channel auxiliary subunit gamma 5 protein-coding 252989-3 chr8 61856992 61858060 + 527.06 NA Intergenic L1MD1|LINE|L1 -32313 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA 220838-3 chr19 36879517 36880431 + 527.06 NA TTS (NM_003419) TTS (NM_003419) 28323 NM_001242476 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding 324845 chr8 139733561 139735143 + 527.06 NA intron (NM_001160372, intron 21 of 22) intron (NM_001160372, intron 21 of 22) -31229 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 208891 chr14 66679261 66680033 + 527.06 NA intron (NM_001024218, intron 1 of 21) L1MEg|LINE|L1 172240 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 229447-3 chr3 25128234 25129196 + 527.06 NA intron (NM_001290216, intron 3 of 10) intron (NM_001290216, intron 3 of 10) -212087 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding 177619-4 chr2 136512816 136513517 + 527.06 NA Intergenic Intergenic -252379 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 189478 chr11 55117412 55118054 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -144422 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 226899 chr10 30404443 30405458 + 527.06 NA Intergenic L1MB8|LINE|L1 -29071 NM_001244134 1326 Hs.432453 NM_005204 ENSG00000107968 MAP3K8 AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT mitogen-activated protein kinase kinase kinase 8 protein-coding 221277-4 chr3 82813412 82814164 + 527.06 NA Intergenic Tigger3|DNA|TcMar-Tigger 827646 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA 267571-2 chr12 133043511 133044591 + 527.06 NA intron (NM_001127372, intron 2 of 4) AluSg|SINE|Alu 6469 NM_001289972 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding 413918 chr1 78549441 78551627 + 527.06 NA Intergenic L1PA16|LINE|L1 59560 NM_000959 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding 388619 chr8 139522428 139523976 + 527.06 NA Intergenic L1MA5A|LINE|L1 179921 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 411107 chr8 144983594 144985257 + 527.06 NA intron (NR_023392, intron 4 of 4) THE1D|LTR|ERVL-MaLR -10440 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 186228-3 chr18 3683621 3684409 + 527.06 NA intron (NM_001308390, intron 4 of 10) intron (NM_001308390, intron 4 of 10) 80278 NR_119377 84777 Hs.659053 NM_032691 DLGAP1-AS2 - DLGAP1 antisense RNA 2 ncRNA 419628 chr14 70540577 70542051 + 527.06 NA Intergenic LTR19-int|LTR|ERV1 -6310 NM_003814 8748 Hs.177984 NM_003814 ENSG00000134007 ADAM20 - ADAM metallopeptidase domain 20 protein-coding 193168 chr11 115853799 115855194 + 527.06 NA Intergenic L1ME3|LINE|L1 -94296 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA 314567-2 chr5 113882677 113883677 + 527.06 NA Intergenic L1MB3|LINE|L1 369483 NM_022828 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding 381592 chr3 53967528 53969171 + 527.06 NA Intergenic Intergenic -76490 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding 240515-3 chr5 145768749 145769799 + 527.06 NA intron (NM_205846, intron 5 of 6) intron (NM_205846, intron 5 of 6) 66068 NM_205846 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding 258347 chr20 31239616 31240818 + 527.06 NA Intergenic Intergenic -17447 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 207310-2 chr14 78542995 78543893 + 527.06 NA intron (NM_004796, intron 1 of 16) intron (NM_004796, intron 1 of 16) 139725 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 325723 chr19 34955744 34956877 + 527.06 NA TTS (NM_175872) TTS (NM_175872) 7919 NM_175872 126375 Hs.50405 NM_175872 ENSG00000180884 ZNF792 - zinc finger protein 792 protein-coding 194134 chr10 113686368 113687090 + 527.06 NA intron (NM_001227, intron 1 of 6) MER47A|DNA|TcMar-Tigger 6817 NM_033338 840 Hs.9216 NM_001227 ENSG00000165806 CASP7 CASP-7|CMH-1|ICE-LAP3|LICE2|MCH3 caspase 7 protein-coding 224001 chr6 15719505 15720211 + 527.06 NA Intergenic L1ME3Cz|LINE|L1 -56800 NM_001271668 84062 Hs.571148 NM_032122 ENSG00000047579 DTNBP1 BLOC1S8|DBND|HPS7|My031|SDY dystrobrevin binding protein 1 protein-coding 249299 chr7 42331623 42332634 + 527.06 NA Intergenic AluJr|SINE|Alu -94919 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding 208804-7 chr8 134203003 134203748 + 527.06 NA Intergenic Intergenic 316879 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 191586-2 chr10 41756587 41757285 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 611109 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 225494-2 chr1 82730868 82731747 + 527.06 NA Intergenic L1MEc|LINE|L1 -171876 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA 360773 chr1 225279907 225281247 + 527.06 NA intron (NM_001367479, intron 54 of 85) AluY|SINE|Alu 147461 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding 190444-2 chr20 53450023 53450722 + 527.06 NA intron (NM_173485, intron 2 of 2) intron (NM_173485, intron 2 of 2) -102398 NR_110051 101927770 NR_110051 LOC101927770 - uncharacterized LOC101927770 ncRNA 183856-3 chr2 114417977 114418694 + 527.06 NA Intergenic Charlie2a|DNA|hAT-Charlie -24306 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 186667-6 chr8 77757030 77758100 + 527.06 NA Intergenic L1M4|LINE|L1 306868 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA 303850-2 chr12 34474681 34475715 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 452702 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 207047 chr10 39146594 39147401 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 450401 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 208979 chr10 44072970 44073632 + 527.06 NA Intergenic L1MD2|LINE|L1 160899 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 328534 chr17 58950729 58952205 + 527.06 NA intron (NM_014906, intron 1 of 6) AluJb|SINE|Alu 155413 NM_001353084 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding 420155 chr10 113208145 113210301 + 527.06 NA Intergenic L1M4|LINE|L1 79952 NM_001349870 6934 Hs.593995 NM_030756 ENSG00000148737 TCF7L2 TCF-4|TCF4 transcription factor 7 like 2 protein-coding 211000-2 chr11 80226823 80227675 + 527.06 NA Intergenic Intergenic 535554 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 179376-5 chr2 31747159 31747949 + 527.06 NA Intergenic LTR33B|LTR|ERVL 56426 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 201864-7 chr7 622245 623128 + 527.06 NA intron (NM_001164760, intron 4 of 10) intron (NM_001164760, intron 4 of 10) 19288 NR_110055 101926963 Hs.521338 NR_110054 LOC101926963 - uncharacterized LOC101926963 ncRNA 234454 chr11 87548996 87550144 + 527.06 NA Intergenic MER94|DNA|hAT-Blackjack 169841 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA 253692 chr8 140075570 140076458 + 527.06 NA intron (NM_001160372, intron 17 of 22) MIR|SINE|MIR 24521 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 215128-2 chr11 27805862 27806548 + 527.06 NA Intergenic Kanga2_a|DNA|TcMar-Tc2 -84175 NM_170731 627 Hs.502182 NM_001709 ENSG00000176697 BDNF ANON2|BULN2 brain derived neurotrophic factor protein-coding 197208-2 chr2 213550257 213550903 + 527.06 NA intron (NR_047660, intron 9 of 14) L1M4|LINE|L1 -207487 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA 195451-5 chr6 517538 518165 + 527.06 NA intron (NM_018303, intron 23 of 27) L1MC5|LINE|L1 126099 NM_002460 3662 Hs.401013 NM_002460 ENSG00000137265 IRF4 LSIRF|MUM1|NF-EM5|SHEP8 interferon regulatory factor 4 protein-coding 229183 chr14 52182263 52183211 + 527.06 NA Intergenic THE1B|LTR|ERVL-MaLR -84961 NM_001281469 5729 Hs.306831 NM_000953 ENSG00000168229 PTGDR AS1|ASRT1|DP|DP1|PTGDR1 prostaglandin D2 receptor protein-coding 329413 chr1 193988895 193990309 + 527.06 NA Intergenic L1MA4|LINE|L1 684857 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 206168 chr7 18339391 18340180 + 527.06 NA intron (NM_001321896, intron 1 of 12) L1MEc|LINE|L1 49693 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 203621-3 chr8 124911736 124912544 + 527.06 NA Intergenic MER21B|LTR|ERVL -29868 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA 265814-2 chr3 27866644 27867784 + 527.06 NA Intergenic L1MA8|LINE|L1 -33078 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA 218993 chr5 171023083 171023890 + 527.06 NA intron (NM_022897, intron 14 of 27) L1MEf|LINE|L1 161468 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding 240515 chr1 74883058 74884034 + 527.06 NA Intergenic L1PB4|LINE|L1 -150138 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding 210385-2 chr10 88319603 88320389 + 527.06 NA intron (NM_018363, intron 5 of 6) L1PA17|LINE|L1 263322 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding 181572-7 chr3 118606767 118607321 + 527.06 NA intron (NR_135547, intron 2 of 3) MLT1E2|LTR|ERVL-MaLR -34724 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 208979-2 chr10 64965486 64966499 + 527.06 NA Intergenic Intergenic -41474 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA 185437-2 chr10 105455069 105455915 + 527.06 NA Intergenic Tigger1|DNA|TcMar-Tigger 364841 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA 205378-10 chr3 53412610 53413421 + 527.06 NA Intergenic L1MEf|LINE|L1 -65472 NM_001290207 55802 Hs.476353 NM_018403 ENSG00000272886 DCP1A HSA275986|Nbla00360|SMAD4IP1|SMIF decapping mRNA 1A protein-coding 212844-3 chr14 86752059 86752904 + 527.06 NA Intergenic THE1D-int|LTR|ERVL-MaLR -153297 NR_038445 283585 Hs.381998 NR_038445 ENSG00000258804 LINC01148 - long intergenic non-protein coding RNA 1148 ncRNA 294802 chr8 129787278 129788610 + 527.06 NA Intergenic L1MA3|LINE|L1 -1320 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 320804 chr16 52119355 52120820 + 527.06 NA Intergenic L1M2|LINE|L1 34806 NR_104655 102467079 Hs.98466 NR_104655 ENSG00000261749 LINC02180 - long intergenic non-protein coding RNA 2180 ncRNA 395646 chr1 47599388 47601274 + 527.06 NA Intergenic L1MEd|LINE|L1 -163014 NR_126355 102724077 Hs.159718 NR_126355 LINC01389 - long intergenic non-protein coding RNA 1389 ncRNA 256503 chr10 30300373 30301447 + 527.06 NA Intergenic HAL1|LINE|L1 48428 NM_018109 55149 Hs.173946 NM_018109 ENSG00000107951 MTPAP PAPD1|SPAX4|TENT6 mitochondrial poly(A) polymerase protein-coding 194134-2 chr11 2631050 2631820 + 527.06 NA non-coding (NR_002728, exon 1 of 1) non-coding (NR_002728, exon 1 of 1) 68563 NR_002728 10984 Hs.604823 NR_002728 ENSG00000269821 KCNQ1OT1 KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012 KCNQ1 opposite strand/antisense transcript 1 ncRNA 234278 chr7 17571399 17572454 + 527.06 NA Intergenic L1MEc|LINE|L1 -13017 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA 318783 chr3 67973743 67974703 + 527.06 NA Intergenic L2a|LINE|L2 -17369 NM_001252216 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding 221453-3 chr5 44924183 44925002 + 527.06 NA Intergenic Intergenic 115645 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 238934-3 chr4 33322885 33323724 + 527.06 NA Intergenic Tigger3b|DNA|TcMar-Tigger 716589 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 537777 chr7 4552689 4554536 + 527.06 NA Intergenic Intergenic -128683 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 346893 chr16 80658821 80660601 + 527.06 NA intron (NM_152342, intron 2 of 6) L1MC4a|LINE|L1 -86903 NR_104666 101928276 Hs.149769 NR_104665 ENSG00000260737 LINC01227 - long intergenic non-protein coding RNA 1227 ncRNA 184735-3 chr16 78148996 78149616 + 527.06 NA intron (NM_001291997, intron 3 of 7) intron (NM_001291997, intron 3 of 7) 49652 NR_120435 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding 296998 chr5 124170232 124171480 + 527.06 NA intron (NR_125774, intron 4 of 5) L1ME2z|LINE|L1 267664 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 190708-6 chr12 3982519 3983142 + 527.06 NA Intergenic AluSq2|SINE|Alu -109382 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding 307803-3 chr7 31011002 31012399 + 527.06 NA Intergenic HAL1|LINE|L1 -40608 NM_001118 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding 181309-11 chr6 27633070 27633858 + 527.06 NA Intergenic LTR3B|LTR|ERVK -60571 NR_038294 100507173 Hs.635987 NR_038292 ENSG00000281706 LINC01012 - long intergenic non-protein coding RNA 1012 ncRNA 281626-3 chr5 141264595 141265987 + 527.06 NA Intergenic ERVL-E-int|LTR|ERVL 19896 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 188688 chr10 91093394 91094265 + 527.06 NA Intergenic MSTA-int|LTR|ERVL-MaLR 48021 NR_047467 100874184 Hs.512240 NR_047467 LINC00502 - long intergenic non-protein coding RNA 502 ncRNA 232170-4 chr2 105877950 105879134 + 527.06 NA intron (NM_001004722, intron 3 of 3) MLT1B|LTR|ERVL-MaLR 26695 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding 247718-2 chr12 46315351 46316254 + 527.06 NA Intergenic L1MB3|LINE|L1 -46759 NM_001278388 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding 271524-3 chr2 81723667 81725109 + 527.06 NA Intergenic Intergenic -257442 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 177356-5 chr5 66519397 66519998 + 527.06 NA Intergenic MLT1G1|LTR|ERVL-MaLR -8093 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA 205466-3 chr2 52327342 52328060 + 527.06 NA intron (NR_135237, intron 8 of 10) L1M2c|LINE|L1 -42947 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 345576-2 chr12 34504385 34505599 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 482496 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 195627-11 chr8 86310125 86310815 + 527.06 NA Intergenic MLT2B3|LTR|ERVL -32077 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding 210034-3 chr8 56359123 56360147 + 527.06 NA Intergenic AluY|SINE|Alu 31075 NR_103832 442388 Hs.632065 NM_001145251 ENSG00000253542 SDR16C6P SDR16C6 short chain dehydrogenase/reductase family 16C member 6, pseudogene pseudo 283031 chr10 99248445 99249546 + 527.06 NA Intergenic MSTA-int|LTR|ERVL-MaLR -13120 NM_001166244 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding 339339 chr7 54214000 54215135 + 527.06 NA Intergenic L1M1|LINE|L1 -116130 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 196066-5 chr8 139195860 139196801 + 527.06 NA Intergenic Intergenic -282289 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 180694-4 chr14 32800848 32801760 + 527.06 NA intron (NM_004274, intron 12 of 13) L1MCa|LINE|L1 -137575 NM_001164749 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 263530-2 chr4 122491146 122492657 + 527.06 NA Intergenic L1PA10|LINE|L1 -35406 NM_000586 3558 Hs.89679 NM_000586 ENSG00000109471 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding 235508-3 chr2 31487320 31488310 + 527.06 NA Intergenic L1M5|LINE|L1 -73073 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding 180957 chr15 94290211 94290890 + 527.06 NA Intergenic L1MEf|LINE|L1 -7651 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding 195803-11 chr9 28971668 28972440 + 527.06 NA intron (NM_001354574, intron 1 of 5) L1M1|LINE|L1 -83099 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA 178673-3 chr8 29692571 29693199 + 527.06 NA Intergenic Intergenic 55224 NR_026765 619351 Hs.566911 NR_026765 ENSG00000251191 LINC00589 C8orf75|TSLNC8 long intergenic non-protein coding RNA 589 ncRNA 236211-5 chr2 151117984 151118981 + 527.06 NA Intergenic L1MEg|LINE|L1 143381 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding 366922 chr10 16712625 16714060 + 527.06 NA intron (NM_152724, intron 6 of 7) L1MA6|LINE|L1 104082 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding 398809-2 chr20 58487251 58489030 + 527.06 NA intron (NR_130908, intron 1 of 1) MER44D|DNA|TcMar-Tigger 26798 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 236826-3 chr5 45227074 45227943 + 527.06 NA Intergenic Intergenic 418561 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 208540-4 chr4 35713649 35714657 + 527.06 NA Intergenic L1MA4A|LINE|L1 529786 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 348474 chr5 140770628 140771986 + 527.06 NA Intergenic L1MD1|LINE|L1 -14829 NM_031410 56147 Hs.199343 NM_018900 ENSG00000204970 PCDHA1 PCDH-ALPHA1 protocadherin alpha 1 protein-coding 192816 chr17 69986661 69987263 + 527.06 NA Intergenic L1MA2|LINE|L1 25255 NR_110874 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA 302884 chr7 62962080 62963430 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 341301 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 185701-4 chr2 117301186 117301900 + 527.06 NA Intergenic L1MA2|LINE|L1 -513148 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 225055-2 chr6 44894581 44895968 + 527.06 NA intron (NM_181356, intron 12 of 12) FLAM_A|SINE|Alu 302496 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA 251496-3 chr8 138152520 138153534 + 527.06 NA exon (NM_001362965, exon 13 of 20) exon (NM_001362965, exon 13 of 20) -69482 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 238056-5 chr8 134441125 134442110 + 527.06 NA Intergenic L1PREC2|LINE|L1 -156454 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 459684 chr6 125109843 125111892 + 527.06 NA Intergenic L1M2|LINE|L1 -42906 NM_001300994 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding 188775-2 chr19 40021440 40022300 + 527.06 NA TTS (NM_001297763) TTS (NM_001297763) 24810 NM_001297763 339327 Hs.125008 NM_178544 ENSG00000187187 ZNF546 ZNF49 zinc finger protein 546 protein-coding 184383-5 chr9 75179793 75180571 + 527.06 NA Intergenic L1MEd|LINE|L1 91668 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding 228217-4 chr15 91275633 91276503 + 527.06 NA intron (NM_001323036, intron 8 of 11) L1MEf|LINE|L1 174272 NM_001323040 9899 Hs.21754 NM_014848 ENSG00000185518 SV2B HsT19680 synaptic vesicle glycoprotein 2B protein-coding 186579-2 chr2 106004676 106005536 + 527.06 NA Intergenic L1MB8|LINE|L1 -60582 NM_032411 84417 Hs.43125 NM_032411 ENSG00000119147 ECRG4 C2orf40 ECRG4 augurin precursor protein-coding 361475 chr10 75252848 75254198 + 527.06 NA Intergenic L2b|LINE|L2 -17566 NM_144589 118881 Hs.355333 NM_144589 ENSG00000165644 COMTD1 - catechol-O-methyltransferase domain containing 1 protein-coding 202479-3 chr8 138031814 138032502 + 527.06 NA intron (NR_161374, intron 2 of 7) MIRb|SINE|MIR 51387 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 191323 chr10 87565576 87566355 + 527.06 NA Intergenic L1MA4A|LINE|L1 58132 NM_001178118 9562 Hs.121260 NM_004897 ENSG00000107789 MINPP1 HIPER1|MINPP2|MIPP multiple inositol-polyphosphate phosphatase 1 protein-coding 231906-2 chr2 238552405 238553152 + 527.06 NA intron (NR_037809, intron 1 of 2) intron (NR_037809, intron 1 of 2) 2721 NR_037809 151171 Hs.652076 NR_037809 ENSG00000225493 LINC01107 - long intergenic non-protein coding RNA 1107 ncRNA 397228 chr20 47067400 47069042 + 527.06 NA intron (NM_172110, intron 5 of 13) MIRb|SINE|MIR -98746 NR_037410 100500814 NR_037410 ENSG00000264901 MIR3616 mir-3616 microRNA 3616 ncRNA 611302 chr8 99459560 99461950 + 527.06 NA intron (NM_017890, intron 23 of 61) intron (NM_017890, intron 23 of 61) 75975 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA 212932-5 chr3 25490592 25491564 + 527.06 NA intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 32768 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding 224264-6 chr8 144938627 144939429 + 527.06 NA intron (NM_006958, intron 2 of 2) L1MB5|LINE|L1 11852 NM_001029976 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding 206520-6 chrX 94559309 94560286 + 527.06 NA Intergenic HAL1|LINE|L1 503429 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA 566766 chr2 71956913 71959190 + 527.06 NA Intergenic L1PA16|LINE|L1 189811 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 218467 chr3 69403922 69405262 + 527.06 NA Intergenic Intergenic -18504 NM_015123 23150 Hs.371681 NM_015123 ENSG00000114541 FRMD4B 6030440G05Rik|GRSP1 FERM domain containing 4B protein-coding 274423-3 chr12 34565843 34566819 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 543835 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 580820 chr15 26286403 26289021 + 527.06 NA Intergenic L1MA9|LINE|L1 171899 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA 428763-2 chr9 133501855 133503589 + 527.06 NA Intergenic L1MEd|LINE|L1 22237 NM_001080483 389827 NM_001080483 ENSG00000187616 MYMK MYOMAKER|TMEM226|TMEM8C myomaker, myoblast fusion factor protein-coding 311053 chr19 37669624 37670801 + 527.06 NA 5' UTR (NM_152605, exon 4 of 4) 5' UTR (NM_152605, exon 4 of 4) -13951 NM_001320668 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 374301 chr11 54868437 54870292 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 162532 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 213020 chr12 34450196 34450926 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 428065 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 227602-2 chr19 34953614 34954632 + 527.06 NA Intergenic L1MB3|LINE|L1 10106 NM_175872 126375 Hs.50405 NM_175872 ENSG00000180884 ZNF792 - zinc finger protein 792 protein-coding 230501-2 chr7 112650368 112651584 + 527.06 NA intron (NR_110158, intron 5 of 7) L1MA9|LINE|L1 28595 NR_110158 101928012 Hs.521131 NR_110158 ENSG00000223646 LOC101928012 - uncharacterized LOC101928012 ncRNA 183417-8 chrX 101907438 101908052 + 527.06 NA intron (NM_001282401, intron 1 of 8) L1M3e|LINE|L1 24282 NM_001282401 84460 Hs.496512 NM_001011657 ENSG00000166432 ZMAT1 - zinc finger matrin-type 1 protein-coding 299546 chr2 118514419 118515450 + 527.06 NA Intergenic L1MC3|LINE|L1 88032 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA 190005-7 chr9 91629214 91629805 + 527.06 NA Intergenic L1MB8|LINE|L1 -6742 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA 178234-8 chr5 46139310 46140158 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -443354 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 472509 chr7 1335310 1337523 + 527.06 NA Intergenic L1MEc|LINE|L1 103544 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding 213899-5 chr2 227434264 227435217 + 527.06 NA Intergenic Intergenic -37392 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA 607437 chr3 183652525 183654517 + 527.06 NA intron (NM_001349426, intron 2 of 6) LTR4|LTR|ERV1 17898 NM_001349429 54800 Hs.407709 NM_017644 ENSG00000114796 KLHL24 DRE1|EBSSH|KRIP6 kelch like family member 24 protein-coding 189830-2 chr1 113156991 113158031 + 527.06 NA Intergenic L1MC1|LINE|L1 48742 NR_038846 643441 Hs.124895 NR_038846 LOC643441 - uncharacterized LOC643441 ncRNA 188248-8 chr8 82860335 82861117 + 527.06 NA Intergenic Intergenic -51378 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA 300512-2 chr7 21876109 21877356 + 527.06 NA intron (NM_001277115, intron 74 of 81) MLT1J|LTR|ERVL-MaLR 69167 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding 202391-3 chr14 70545633 70546481 + 527.06 NA Intergenic L1M1|LINE|L1 -11053 NM_003814 8748 Hs.177984 NM_003814 ENSG00000134007 ADAM20 - ADAM metallopeptidase domain 20 protein-coding 191938 chr12 3403973 3404899 + 527.06 NA intron (NM_001256536, intron 1 of 9) L1ME3A|LINE|L1 23087 NM_001256536 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding 386950 chr18 2040150 2041333 + 527.06 NA Intergenic Intergenic 530764 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 205202-3 chr12 133005829 133006733 + 527.06 NA intron (NM_001330513, intron 2 of 4) intron (NM_001330513, intron 2 of 4) 19914 NM_001256279 7574 Hs.489608 NM_019591 ENSG00000198393 ZNF26 HEL-179|KOX20 zinc finger protein 26 protein-coding 214338 chr2 89820207 89821016 + 527.06 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -182704 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 259577-2 chr8 36891056 36892047 + 527.06 NA intron (NM_001031836, intron 19 of 26) L1M4|LINE|L1 107177 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding 219784-4 chr6 137422343 137423264 + 527.06 NA Intergenic Intergenic 71591 NM_175747 167826 Hs.195398 NM_175747 ENSG00000177468 OLIG3 Bhlhb7|bHLHe20 oligodendrocyte transcription factor 3 protein-coding 387828 chr7 93171708 93173180 + 527.06 NA Intergenic LTR8B|LTR|ERV1 -24059 NM_001350083 219285 Hs.489118 NM_152703 ENSG00000177409 SAMD9L ATXPC|C7orf6|DRIF2|UEF1 sterile alpha motif domain containing 9 like protein-coding 638446 chr10 76097152 76100160 + 527.06 NA intron (NM_001305581, intron 5 of 6) LTR8|LTR|ERV1 315895 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 206959 chr12 34663063 34663876 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 640973 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 188160 chr7 54093122 54093712 + 527.06 NA Intergenic Intergenic -237280 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 235947-4 chr8 138531394 138532459 + 527.06 NA Intergenic Intergenic -34196 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 205553-4 chr3 193844151 193844763 + 527.06 NA promoter-TSS (NR_146718) promoter-TSS (NR_146718) -448 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA 296735 chr9 92847243 92848590 + 527.06 NA exon (NM_031486, exon 5 of 5) exon (NM_031486, exon 5 of 5) 30052 NM_001354536 83744 Hs.668378 NM_031486 ENSG00000127081 ZNF484 BA526D8.4 zinc finger protein 484 protein-coding 276092-2 chr3 82621314 82622245 + 527.06 NA Intergenic Intergenic 635637 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA 380801-2 chr14 28934349 28935828 + 527.06 NA Intergenic L1MB1|LINE|L1 -149301 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA 305344-2 chr8 124391972 124393612 + 527.06 NA Intergenic L1PB3|LINE|L1 -20093 NM_194291 157378 Hs.100691 NM_194291 ENSG00000164983 TMEM65 - transmembrane protein 65 protein-coding 290849-2 chr5 42260695 42262093 + 527.06 NA Intergenic L1M2|LINE|L1 -86049 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 289971 chr1 118549329 118550333 + 527.06 NA Intergenic L1PA14|LINE|L1 -364603 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 374652 chr8 117496718 117498282 + 527.06 NA Intergenic Intergenic -23213 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 221980-2 chr11 16889442 16890514 + 527.06 NA intron (NM_001329630, intron 3 of 26) L1PA15-16|LINE|L1 36044 NR_145810 109623465 NR_145810 SNORD147 - small nucleolar RNA, C/D box 147 snoRNA 193343-5 chr8 78367050 78368024 + 527.06 NA Intergenic Intergenic -148803 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding 231907 chr8 38653728 38654829 + 527.06 NA Intergenic Intergenic -53021 NR_003129 286140 Hs.512071 NR_003129 RNF5P1 - ring finger protein 5 pseudogene 1 pseudo 204499-3 chr14 70534929 70535838 + 527.06 NA promoter-TSS (NM_003814) promoter-TSS (NM_003814) -379 NM_003814 8748 Hs.177984 NM_003814 ENSG00000134007 ADAM20 - ADAM metallopeptidase domain 20 protein-coding 217939-3 chr4 76462916 76463725 + 527.06 NA intron (NM_020859, intron 1 of 10) MSTA-int|LTR|ERVL-MaLR 28091 NM_020859 57619 Hs.683808 NM_020859 ENSG00000138771 SHROOM3 APXL3|MSTP013|SHRM|ShrmL shroom family member 3 protein-coding 244995-2 chr5 38305391 38306481 + 527.06 NA intron (NM_152403, intron 1 of 21) ERVL-E-int|LTR|ERVL -14950 NR_046219 100852408 Hs.570954 NR_046219 ENSG00000248730 EGFLAM-AS4 - EGFLAM antisense RNA 4 ncRNA 189829 chr16 35441517 35442244 + 527.06 NA Intergenic Intergenic 38716 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 219784-5 chr7 686746 687904 + 527.06 NA intron (NM_001164760, intron 2 of 10) L1MEg|LINE|L1 25199 NM_002735 5575 Hs.520851 NM_002735 ENSG00000188191 PRKAR1B PRKAR1 protein kinase cAMP-dependent type I regulatory subunit beta protein-coding 273808 chr22 36987068 36988182 + 527.06 NA Intergenic AluSx1|SINE|Alu 20226 NM_001163857 339669 Hs.124502 NM_178552 ENSG00000185264 TEX33 C22orf33|EAN57|cE81G9.2 testis expressed 33 protein-coding 300776-2 chr3 118719354 118720936 + 527.06 NA intron (NR_135547, intron 1 of 3) L1MD1|LINE|L1 78377 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 180342-3 chr20 38241970 38242620 + 527.06 NA intron (NM_001029864, intron 2 of 13) MIRb|SINE|MIR -17880 NR_104170 149684 Hs.628250 NR_104170 ENSG00000285347 LOC149684 - uncharacterized LOC149684 ncRNA 234717 chr1 189267849 189268718 + 527.06 NA Intergenic MER52-int|LTR|ERV1 1207727 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 223737-5 chr8 104611965 104612994 + 527.06 NA Intergenic L1PA15|LINE|L1 -23455 NM_001135703 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding 200195 chr1 209016885 209017656 + 527.06 NA Intergenic L1MC4a|LINE|L1 44816 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA 301654 chr13 92762221 92763527 + 527.06 NA intron (NM_004466, intron 7 of 7) L1M2a|LINE|L1 -41260 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA 192465 chr11 114189989 114190573 + 527.06 NA intron (NM_006006, intron 4 of 6) Tigger5|DNA|TcMar-Tigger -105532 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding 211615-6 chr8 120025010 120025696 + 527.06 NA intron (NM_022783, intron 8 of 8) intron (NM_022783, intron 8 of 8) -99749 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding 209770-3 chr19 30638518 30639315 + 527.06 NA intron (NM_001352260, intron 4 of 5) L1MEg|LINE|L1 266532 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 183066-4 chr8 101216718 101217390 + 527.06 NA Intergenic L1MA5|LINE|L1 -10990 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding 188512-2 chr22 49745367 49746190 + 527.06 NA Intergenic L1MB7|LINE|L1 78553 NR_146334 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding 380274-2 chr7 145918161 145919838 + 527.06 NA Intergenic L1M5|LINE|L1 -855272 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding 423581 chr14 68152172 68153766 + 527.06 NA intron (NM_133509, intron 7 of 10) L1PREC2|LINE|L1 329377 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 279781-2 chr3 66899893 66901126 + 527.06 NA Intergenic L1MA5|LINE|L1 -97798 NM_032505 84541 Hs.116665 NM_032505 ENSG00000163376 KBTBD8 TA-KRP|TAKRP kelch repeat and BTB domain containing 8 protein-coding 231819 chr10 42301800 42302765 + 527.06 NA Intergenic Intergenic 65763 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 227251-5 chr9 28520202 28521310 + 527.06 NA intron (NM_152570, intron 2 of 6) intron (NM_152570, intron 2 of 6) 198549 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 182978-3 chr4 149607287 149607924 + 527.06 NA intron (NM_001363507, intron 8 of 13) L1MA4|LINE|L1 208238 NM_001363507 285423 Hs.591689 NM_001363507 ENSG00000234828 IQCM - IQ motif containing M protein-coding 194310-5 chr5 120352167 120352642 + 527.06 NA Intergenic Intergenic -111874 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding 207574-2 chr18 79889876 79890629 + 527.06 NA intron (NM_012283, intron 1 of 1) L1M4|LINE|L1 26584 NM_012283 26251 Hs.247905 NM_012283 ENSG00000178342 KCNG2 KCNF2|KV6.2 potassium voltage-gated channel modifier subfamily G member 2 protein-coding 198702-3 chr3 119284182 119285020 + 527.06 NA intron (NR_046574, intron 3 of 3) L1M2c|LINE|L1 -9782 NM_020754 57514 Hs.668218 NM_020754 ENSG00000031081 ARHGAP31 AOS1|CDGAP Rho GTPase activating protein 31 protein-coding 254482-3 chr5 46167205 46168122 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -471283 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 193343-6 chrX 67080726 67081447 + 527.06 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -441788 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding 278727-2 chr16 80228082 80229232 + 527.06 NA intron (NR_120307, intron 2 of 5) L2a|LINE|L2 -312077 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding 342589 chr8 128244040 128245342 + 527.06 NA Intergenic Tigger1|DNA|TcMar-Tigger 94575 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 293573-2 chr8 133167425 133168721 + 527.06 NA Intergenic MIR|SINE|MIR -22966 NM_001204869 8840 Hs.492974 NM_003882 ENSG00000104415 CCN4 WISP1|WISP1-OT1|WISP1-UT1|WISP1c|WISP1i|WISP1tc cellular communication network factor 4 protein-coding 217851 chr3 44498472 44499183 + 527.06 NA TTS (NM_001287349) TTS (NM_001287349) 11790 NM_001287349 285346 Hs.648974 NM_001287349 ENSG00000178917 ZNF852 - zinc finger protein 852 protein-coding 283910-2 chr5 30515821 30516924 + 527.06 NA Intergenic MLT1J|LTR|ERVL-MaLR 635812 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 242536 chr2 117236211 117237012 + 527.06 NA Intergenic L1PA16|LINE|L1 -578080 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 252637 chr17 74141780 74142661 + 527.06 NA Intergenic L1ME2|LINE|L1 -61458 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding 208716-4 chr5 33102657 33103504 + 527.06 NA Intergenic L1PA15-16|LINE|L1 -126655 NR_147008 105374716 Hs.582475 NR_147008 ENSG00000251443 LINC02160 - long intergenic non-protein coding RNA 2160 ncRNA 184998-9 chr7 30220120 30220870 + 527.06 NA Intergenic L1MC1|LINE|L1 -64102 NM_147128 223082 Hs.263912 NM_147128 ENSG00000180233 ZNRF2 RNF202 zinc and ring finger 2 protein-coding 283734-2 chr8 139084443 139085502 + 527.06 NA Intergenic Intergenic -170931 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 289005 chr4 46456278 46457385 + 527.06 NA Intergenic L1MA4|LINE|L1 -66703 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding 203972-7 chr4 42802803 42803561 + 527.06 NA Intergenic MSTA-int|LTR|ERVL-MaLR -90084 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 355766 chr7 40891185 40892606 + 527.06 NA Intergenic AluSc|SINE|Alu 88044 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 212932-4 chr21 28601422 28602333 + 527.06 NA Intergenic Intergenic 62559 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA 217588 chr10 62121696 62122712 + 527.06 NA Intergenic L1MA5|LINE|L1 72847 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding 242975-3 chr3 71742833 71743715 + 527.06 NA intron (NM_173359, intron 1 of 7) L1MEc|LINE|L1 10317 NM_001282886 317649 Hs.581355 NM_173359 ENSG00000163412 EIF4E3 eIF-4E3|eIF4E-3 eukaryotic translation initiation factor 4E family member 3 protein-coding 247191 chr21 32216437 32217266 + 527.06 NA Intergenic L1MA9|LINE|L1 62198 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding 178234-7 chr4 124082006 124082747 + 527.06 NA Intergenic Intergenic 308112 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA 323879 chr11 85534456 85535817 + 527.06 NA intron (NM_001142699, intron 3 of 27) intron (NM_001142699, intron 3 of 27) 92134 NM_001142699 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 201337-4 chr7 97440534 97441050 + 527.06 NA Intergenic L1MB8|LINE|L1 -291294 NM_013997 6863 Hs.2563 NM_003182 ENSG00000006128 TAC1 Hs.2563|NK2|NKNA|NPK|TAC2 tachykinin precursor 1 protein-coding 192904 chr7 34548966 34549874 + 527.06 NA intron (NR_033665, intron 2 of 3) L1M5|LINE|L1 -108798 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 220311-3 chr6 126669813 126670576 + 527.06 NA Intergenic L1M7|LINE|L1 185563 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA 273632-2 chr8 19430634 19431600 + 527.06 NA intron (NM_001130518, intron 6 of 9) L1MB5|LINE|L1 117141 NM_001174159 63898 Hs.303208 NM_022071 ENSG00000104611 SH2D4A PPP1R38|SH2A SH2 domain containing 4A protein-coding 659353 chr5 150889490 150892155 + 527.06 NA intron (NM_001346557, intron 3 of 3) L1MEc|LINE|L1 14161 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 188951 chr1 76695991 76696789 + 527.06 NA Intergenic L1ME3D|LINE|L1 82877 NR_149059 110806286 NR_149059 ENSG00000237552 LINC02567 - long intergenic non-protein coding RNA 2567 ncRNA 201337 chr2 52048904 52049802 + 527.06 NA intron (NR_135237, intron 7 of 10) L1M4c|LINE|L1 -321295 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 331345 chr9 111541695 111543268 + 527.06 NA exon (NM_133464, exon 6 of 6) exon (NM_133464, exon 6 of 6) 17302 NM_001007169 158399 Hs.584864 NM_133464 ENSG00000173258 ZNF483 ZKSCAN16|ZSCAN48 zinc finger protein 483 protein-coding 234805 chr12 37883378 37884232 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -432969 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 200898-5 chr8 125461035 125461767 + 527.06 NA Intergenic L2a|LINE|L2 29192 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 225494-5 chr8 70800845 70801862 + 527.06 NA Intergenic L1PA15|LINE|L1 132014 NM_001011720 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding 201161-4 chr5 46234733 46235511 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -538742 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 318871 chr10 71115960 71117303 + 527.06 NA Intergenic MSTB-int|LTR|ERVL-MaLR -95939 NM_001244889 219699 Hs.522997 NM_170744 ENSG00000107731 UNC5B UNC5H2|p53RDL1 unc-5 netrin receptor B protein-coding 193255-2 chr21 27387598 27388267 + 527.06 NA Intergenic Intergenic -334447 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 183417 chr1 14033618 14034177 + 527.06 NA Intergenic Intergenic 284482 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding 397052 chr11 50479193 50481035 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 70967 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 298492 chr10 84285829 84287081 + 527.06 NA intron (NR_038220, intron 1 of 5) L1MD2|LINE|L1 6475 NR_038220 170425 Hs.434131 NR_038220 ENSG00000229404 LINC00858 CRCAL-2 long intergenic non-protein coding RNA 858 ncRNA 363057 chr16 8368191 8369486 + 527.06 NA Intergenic Intergenic 221000 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 237001-3 chr2 5580499 5581402 + 527.06 NA Intergenic L1ME2|LINE|L1 110168 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA 245786-2 chr2 45830633 45831371 + 527.06 NA intron (NM_005400, intron 1 of 14) intron (NM_005400, intron 1 of 14) 179327 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding 275565 chr10 75582306 75583329 + 527.06 NA intron (NM_001305581, intron 2 of 6) MSTA-int|LTR|ERVL-MaLR 30359 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA 494470 chr22 34975709 34977751 + 527.06 NA intron (NR_138042, intron 1 of 4) MLT1H2|LTR|ERVL-MaLR 21186 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 262213-2 chr2 126331768 126332879 + 527.06 NA Intergenic L1MB8|LINE|L1 -214338 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 541905 chr2 185507520 185510021 + 527.06 NA Intergenic Intergenic 229949 NR_110215 101927196 Hs.244783 NR_110214 ENSG00000226747 FSIP2-AS2 - FSIP2 antisense RNA 2 ncRNA 305958-3 chr7 136307420 136308928 + 527.06 NA Intergenic Intergenic -330815 NM_001128619 767558 Hs.602015 NM_001128619 ENSG00000267697 LUZP6 MPD6|MTPNUT leucine zipper protein 6 protein-coding 228656 chr1 184681546 184682637 + 527.06 NA Intergenic L1MEb|LINE|L1 72767 NM_025191 80267 Hs.523811 NM_025191 ENSG00000116406 EDEM3 C1orf22 ER degradation enhancing alpha-mannosidase like protein 3 protein-coding 189215-5 chr2 239762026 239762631 + 527.06 NA promoter-TSS (NR_037808) promoter-TSS (NR_037808) -532 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA 200810 chr15 46008239 46009112 + 527.06 NA Intergenic L1MA4A|LINE|L1 303480 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA 177356-3 chr2 118214498 118215105 + 527.06 NA Intergenic L1MD1|LINE|L1 -28415 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA 239110 chr20 3521504 3522461 + 527.06 NA intron (NM_001323332, intron 1 of 25) AluJr|SINE|Alu 50964 NM_139321 8455 Hs.276252 NM_012070 ENSG00000088812 ATRN DPPT-L|MGCA attractin protein-coding 205554-2 chr8 100893705 100894786 + 527.06 NA Intergenic Intergenic 56326 NM_001135702 7534 Hs.492407 NM_003406 ENSG00000164924 YWHAZ 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta protein-coding 291289 chr8 23820919 23821922 + 527.06 NA Intergenic MER91C|DNA|hAT-Tip100 33386 NM_003155 6781 Hs.25590 NM_003155 ENSG00000159167 STC1 STC stanniocalcin 1 protein-coding 332575 chr8 121078203 121079316 + 527.06 NA Intergenic AluJb|SINE|Alu -266713 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 490342 chr5 44981931 44984003 + 527.06 NA Intergenic MLT1C|LTR|ERVL-MaLR 174020 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 193695-5 chr11 112662160 112663048 + 527.06 NA Intergenic L2b|LINE|L2 -106802 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 401356 chr7 3120490 3121880 + 527.06 NA Intergenic L1MB3|LINE|L1 37388 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA 222419-2 chr5 43921748 43922417 + 527.06 NA Intergenic L1M1|LINE|L1 -318852 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA 275740 chr2 121156984 121158248 + 527.06 NA Intergenic THE1D|LTR|ERVL-MaLR 127586 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding 312371 chr14 89092928 89094193 + 527.06 NA Intergenic (TC)n|Simple_repeat|Simple_repeat 268909 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 196066 chr1 221224616 221225491 + 527.06 NA Intergenic L1MA8|LINE|L1 111243 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA 236299-3 chr7 62726979 62727921 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 576606 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 268274 chr20 42214828 42215926 + 527.06 NA intron (NM_133170, intron 16 of 31) MIRb|SINE|MIR -470106 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 223034-2 chr17 58853525 58854657 + 527.06 NA intron (NM_014906, intron 1 of 6) L1MB3|LINE|L1 98222 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding 320453 chr1 48148603 48149980 + 527.06 NA intron (NR_026749, intron 7 of 9) L1M2|LINE|L1 33137 NR_026749 391037 Hs.585393 NR_026749 SKINT1L BTN12|SKINT1|SKINTL|SKINTP Skint1 like (pseudogene) pseudo 312810-2 chr8 36893886 36895282 + 527.06 NA intron (NM_001031836, intron 19 of 26) Cheshire|DNA|hAT-Charlie 110210 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding 222156 chr8 139551914 139552933 + 527.06 NA Intergenic THE1D|LTR|ERVL-MaLR 150700 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 233927 chr1 40114907 40115889 + 527.06 NA Intergenic L1PA16|LINE|L1 -17928 NM_000310 5538 Hs.3873 NM_000310 ENSG00000131238 PPT1 CLN1|INCL|PPT palmitoyl-protein thioesterase 1 protein-coding 341184 chr10 78720644 78722147 + 527.06 NA Intergenic Intergenic 346053 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 232170-3 chr15 80475417 80476257 + 527.06 NA intron (NM_014862, intron 5 of 18) intron (NM_014862, intron 5 of 18) 71455 NM_014862 9915 Hs.459070 NM_014862 ENSG00000172379 ARNT2 WEDAS|bHLHe1 aryl hydrocarbon receptor nuclear translocator 2 protein-coding 184120 chr1 76010225 76010950 + 527.06 NA promoter-TSS (NR_125939) promoter-TSS (NR_125939) -737 NR_125939 101927342 Hs.216363 NR_125939 LOC101927342 - uncharacterized LOC101927342 ncRNA 247367 chr18 11345502 11346514 + 527.06 NA Intergenic MER44B|DNA|TcMar-Tigger -108470 NR_146901 105371994 Hs.640568 NR_146901 ENSG00000267425 LINC01928 - long intergenic non-protein coding RNA 1928 ncRNA 270030-2 chr10 41759424 41760547 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 608060 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 198965 chr10 31592221 31592950 + 527.06 NA Intergenic L1MB3|LINE|L1 -192830 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 272929-2 chr17 48374716 48375646 + 527.06 NA intron (NM_001075099, intron 2 of 12) intron (NM_001075099, intron 2 of 12) 55033 NM_003726 8631 Hs.316931 NM_003726 ENSG00000141293 SKAP1 HEL-S-81p|SCAP1|SKAP55 src kinase associated phosphoprotein 1 protein-coding 188600-5 chr2 100868348 100869246 + 527.06 NA intron (NM_002518, intron 1 of 20) L1MEd|LINE|L1 48658 NM_002518 4862 Hs.156832 NM_002518 ENSG00000170485 NPAS2 MOP4|PASD4|bHLHe9 neuronal PAS domain protein 2 protein-coding 345049-3 chr19 33575061 33576420 + 527.06 NA Intergenic MER119|DNA|hAT-Charlie -46213 NM_001127896 64377 Hs.165724 NM_022467 ENSG00000124302 CHST8 GALNAC4ST1|GalNAc4ST|PSS3 carbohydrate sulfotransferase 8 protein-coding 200019-4 chr5 179100426 179101363 + 527.06 NA Intergenic L1M4|LINE|L1 40521 NM_014594 30832 Hs.272328 NM_014594 ENSG00000177932 ZNF354C KID3 zinc finger protein 354C protein-coding 363496 chr12 14522248 14523471 + 527.06 NA intron (NM_024829, intron 6 of 10) L1MA6|LINE|L1 -44873 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA 216534-4 chr21 30929265 30930484 + 527.06 NA Intergenic HSMAR2|DNA|TcMar-Mariner -48294 NM_175858 337880 Hs.407654 NM_175858 ENSG00000182591 KRTAP11-1 HACL-1|HACL1|KAP11.1 keratin associated protein 11-1 protein-coding 461880 chr8 88719853 88721909 + 527.06 NA Intergenic L1MA9|LINE|L1 -393398 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 190005-5 chr21 31032989 31033720 + 527.06 NA Intergenic Intergenic 5122 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding 231731-3 chr7 45539299 45540237 + 527.06 NA Intergenic L1MB7|LINE|L1 -34372 NM_001281768 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding 232434-2 chr10 104889984 104890951 + 527.06 NA intron (NM_014978, intron 2 of 26) L1MEc|LINE|L1 -224251 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA 219521-3 chr2 177051050 177052307 + 527.06 NA Intergenic Intergenic 160733 NR_157853 105373759 NR_157853 LOC105373759 - uncharacterized LOC105373759 ncRNA 230325 chr17 19617616 19618463 + 527.06 NA Intergenic L1MEc|LINE|L1 -30111 NM_001369138 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding 236474 chr10 129482469 129483577 + 527.06 NA intron (NM_002412, intron 1 of 4) L1MEc|LINE|L1 15782 NM_002412 4255 Hs.501522 NM_002412 ENSG00000170430 MGMT - O-6-methylguanine-DNA methyltransferase protein-coding 221365-3 chr8 98802218 98802933 + 527.06 NA intron (NM_001256312, intron 3 of 12) L1MC5|LINE|L1 23096 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding 263618-2 chr8 46365252 46366340 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 251847 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 386423 chr3 185237079 185238961 + 527.06 NA intron (NM_001966, intron 2 of 6) L1PB4|LINE|L1 15252 NR_106712 100847054 NR_106712 ENSG00000264614 MIR5588 - microRNA 5588 ncRNA 182802 chr1 57852762 57853241 + 527.06 NA intron (NM_001353980, intron 3 of 5) intron (NM_001353980, intron 3 of 5) -7580 NR_104364 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA 191586-5 chr16 75166934 75167579 + 527.06 NA intron (NM_001318475, intron 3 of 3) intron (NM_001318475, intron 3 of 3) 18205 NM_001318475 162239 Hs.388813 NM_153688 ENSG00000184517 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding 189302-4 chr2 172193249 172193931 + 527.06 NA Intergenic L1M4|LINE|L1 90584 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA 311405 chr6 22418979 22420296 + 527.06 NA Intergenic Intergenic -116802 NM_001163558 5617 Hs.1905 NM_000948 ENSG00000172179 PRL GHA1 prolactin protein-coding 406627 chr9 81427378 81429140 + 527.06 NA Intergenic L1MEg|LINE|L1 261276 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding 280308-3 chr16 51704827 51706051 + 527.06 NA Intergenic L1MEc|LINE|L1 -57080 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA 228217 chr10 39063235 39064351 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 367197 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 182626-5 chr2 56844244 56844978 + 527.06 NA Intergenic Intergenic -658841 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 303938 chr11 55022156 55023179 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -239488 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 223034-6 chr8 138746913 138747785 + 527.06 NA intron (NM_152888, intron 22 of 64) intron (NM_152888, intron 22 of 64) 166692 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 196945-3 chr2 181209072 181209794 + 527.06 NA intron (NR_130784, intron 1 of 4) L1PA15|LINE|L1 85596 NR_130784 101927156 Hs.580074 NR_130784 LINC01934 - long intergenic non-protein coding RNA 1934 ncRNA 261422 chr1 229803828 229805359 + 527.06 NA Intergenic Intergenic 81225 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA 191059-6 chr5 178884911 178885634 + 527.06 NA TTS (NM_058230) TTS (NM_058230) -10641 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding 418661 chr10 44157262 44159054 + 527.06 NA Intergenic L1MDa|LINE|L1 -134592 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding 200546 chr8 50693479 50694223 + 527.06 NA intron (NR_135797, intron 17 of 20) L1M1|LINE|L1 529720 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding 262212 chr5 140757457 140758520 + 527.06 NA Intergenic L1MC4|LINE|L1 -28148 NM_031410 56147 Hs.199343 NM_018900 ENSG00000204970 PCDHA1 PCDH-ALPHA1 protocadherin alpha 1 protein-coding 312635 chr8 13761088 13762464 + 527.06 NA Intergenic L1MA9|LINE|L1 132086 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 322297 chr11 78859021 78860618 + 527.06 NA intron (NM_001098816, intron 10 of 33) intron (NM_001098816, intron 10 of 33) -284955 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 201776-5 chr6 27457610 27458285 + 527.06 NA intron (NR_144688, intron 3 of 8) L1M5|LINE|L1 14951 NM_001318892 7738 Hs.158174 NM_007149 ENSG00000096654 ZNF184 kr-ZNF3 zinc finger protein 184 protein-coding 194661-2 chr1 208702022 208702720 + 527.06 NA Intergenic L1ME2|LINE|L1 -26317 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA 218818 chr1 204738244 204739182 + 527.06 NA Intergenic L1MB8|LINE|L1 -52975 NM_006338 10446 Hs.26312 NM_006338 ENSG00000170382 LRRN2 FIGLER7|GAC1|LRANK1|LRRN5 leucine rich repeat neuronal 2 protein-coding 228393-2 chr19 9411726 9412554 + 527.06 NA TTS (NM_001271314) TTS (NM_001271314) 23433 NM_001370384 10781 Hs.656185 NM_006631 ENSG00000174652 ZNF266 HZF1 zinc finger protein 266 protein-coding 227602-3 chr3 78266859 78267989 + 527.06 NA Intergenic L1MA4A|LINE|L1 -218461 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA 228832-4 chr8 75245723 75246841 + 527.06 NA intron (NR_103849, intron 1 of 1) L1MEc|LINE|L1 32199 NR_103850 101805492 Hs.571424 NR_103848 CASC9 ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1 cancer susceptibility 9 ncRNA 208452-2 chr19 37450169 37450804 + 527.06 NA intron (NM_152484, intron 2 of 5) L1M4c|LINE|L1 16958 NM_001330482 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding 209946-3 chr2 121671832 121672930 + 527.06 NA intron (NR_037857, intron 2 of 3) L1PBa|LINE|L1 22392 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 278727-4 chr7 7486106 7487596 + 527.06 NA intron (NM_001037763, intron 13 of 34) L1MD|LINE|L1 49022 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 216885-3 chr5 46266869 46267840 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -570974 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 234366 chr19 33356124 33356951 + 527.06 NA Intergenic Intergenic -17172 NM_001806 1054 Hs.429666 NM_001806 ENSG00000153879 CEBPG GPE1BP|IG/EBP-1 CCAAT enhancer binding protein gamma protein-coding 197033 chr10 80299000 80299704 + 527.06 NA Intergenic Intergenic -9694 NM_000429 4143 Hs.282670 NM_000429 ENSG00000151224 MAT1A MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase 1A protein-coding 195627-10 chr8 43751344 43752133 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 459296 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 200459 chr1 115254605 115255318 + 527.06 NA Intergenic Intergenic -28073 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA 200898 chr10 117592112 117592898 + 527.06 NA Intergenic Intergenic -47437 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA 216007 chr1 24974238 24974870 + 527.06 NA Intergenic HAL1|LINE|L1 -9544 NM_001031680 864 Hs.170019 NM_004350 ENSG00000020633 RUNX3 AML2|CBFA3|PEBP2aC RUNX family transcription factor 3 protein-coding 279254 chr11 31089598 31090996 + 527.06 NA intron (NM_001367979, intron 17 of 38) intron (NM_001367979, intron 17 of 38) -97611 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 178498-7 chr9 98957189 98957688 + 527.06 NA intron (NM_001855, intron 2 of 41) MLT1D|LTR|ERVL-MaLR 13531 NM_001855 1306 Hs.409034 NM_001855 ENSG00000204291 COL15A1 - collagen type XV alpha 1 chain protein-coding 205026-2 chr10 79569381 79570158 + 527.06 NA Intergenic Intergenic -9362 NM_001320813 729238 Hs.523084 NM_001098668 ENSG00000185303 SFTPA2 COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-2A|SP-A|SPA2|SPAII surfactant protein A2 protein-coding 247894 chr10 39297486 39298702 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 601498 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 210209-2 chr17 66090181 66091023 + 527.06 NA intron (NM_001302891, intron 6 of 24) L1MA8|LINE|L1 101290 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 242535 chr2 33998394 33999232 + 527.06 NA intron (NR_126403, intron 4 of 5) L1M4|LINE|L1 -68413 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 209682-6 chr7 64833988 64834888 + 527.06 NA TTS (NM_001271639) TTS (NM_001271639) 40010 NM_001160183 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding 226811 chr3 194289829 194290733 + 527.06 NA Intergenic L1MD2|LINE|L1 22523 NR_024480 100131551 Hs.128066 NR_024480 ENSG00000214145 LINC00887 HEIRCC long intergenic non-protein coding RNA 887 ncRNA 183856-7 chr6 40120198 40120827 + 527.06 NA Intergenic L1MC|LINE|L1 -186050 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 399687 chr20 46500319 46501585 + 527.06 NA 3' UTR (NM_001353824, exon 5 of 5) 3' UTR (NM_001353824, exon 5 of 5) 12620 NM_001353821 55713 Hs.147041 NM_018102 ENSG00000198185 ZNF334 - zinc finger protein 334 protein-coding 231906 chr16 52690238 52691271 + 527.06 NA Intergenic L1MEg|LINE|L1 -83779 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA 207135-5 chr21 22587954 22588808 + 527.06 NA Intergenic Charlie1a|DNA|hAT-Charlie 489764 NR_038400 54143 Hs.352631 NR_038400 ENSG00000184856 LINC00308 C21orf74|NCRNA00308|PRED16 long intergenic non-protein coding RNA 308 ncRNA 182275 chr12 18375069 18375847 + 527.06 NA intron (NM_001288774, intron 13 of 32) MSTA-int|LTR|ERVL-MaLR 113918 NM_001288774 5288 Hs.22500 NM_004570 ENSG00000139144 PIK3C2G PI3K-C2-gamma|PI3K-C2GAMMA phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma protein-coding 225494-4 chr7 51492658 51493683 + 527.06 NA Intergenic L1MA1|LINE|L1 -99914 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA 182012 chr1 214118146 214118986 + 527.06 NA Intergenic LTR41|LTR|ERVL 130033 NM_002763 5629 Hs.741808 NM_002763 ENSG00000117707 PROX1 - prospero homeobox 1 protein-coding 326075 chr7 4349901 4351318 + 527.06 NA Intergenic AluY|SINE|Alu -215772 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 190972 chr2 220159976 220161108 + 527.06 NA Intergenic Tigger3a|DNA|TcMar-Tigger -253977 NR_036228 100422959 NR_036228 ENSG00000266518 MIR4268 - microRNA 4268 ncRNA 182539-6 chr7 112734687 112735487 + 527.06 NA Intergenic Intergenic 55306 NM_022484 64418 Hs.606345 NM_022484 ENSG00000146802 TMEM168 - transmembrane protein 168 protein-coding 303323 chr12 37964222 37965803 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -351762 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 546035 chr12 14524047 14526664 + 527.06 NA intron (NM_024829, intron 6 of 10) L1M4a1|LINE|L1 -42377 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA 213196-2 chr11 81697517 81698375 + 527.06 NA Intergenic L1M2|LINE|L1 192890 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 197648-4 chr18 4786750 4787587 + 527.06 NA Intergenic MLT1D|LTR|ERVL-MaLR -294014 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 232434-3 chr19 36449937 36451066 + 527.06 NA intron (NM_001145345, intron 4 of 4) AluSz|SINE|Alu 29327 NR_033748 644189 Hs.608412 NR_033748 LOC644189 - acyl-CoA thioesterase 4 pseudogene pseudo 248245-2 chr8 139083637 139084332 + 527.06 NA Intergenic Intergenic -169943 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 207047-2 chr12 132913893 132914883 + 527.06 NA Intergenic L1M5|LINE|L1 26546 NR_110919 101928530 Hs.560003 NR_110919 ENSG00000236617 LOC101928530 - uncharacterized LOC101928530 ncRNA 237792 chr1 159460396 159461028 + 527.06 NA Intergenic L1MDa|LINE|L1 20990 NM_012351 26476 Hs.532661 NM_012351 ENSG00000196184 OR10J1 HGMP07J|HSHGMP07J olfactory receptor family 10 subfamily J member 1 protein-coding 227251 chr1 30558281 30559285 + 527.06 NA Intergenic L1MEc|LINE|L1 -159989 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 214689-2 chr19 27623862 27624560 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -169220 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 238670 chr5 45294808 45295561 + 527.06 NA intron (NM_021072, intron 6 of 7) L2|LINE|L2 401196 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 316324-2 chr6 61503727 61504895 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -69819 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 267747-2 chr17 72823802 72824878 + 527.06 NA intron (NM_001352692, intron 6 of 9) MSTA|LTR|ERVL-MaLR -183868 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA 285491 chr8 81224128 81225071 + 527.06 NA Intergenic L1PB1|LINE|L1 -55937 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding 558508-2 chr20 39729833 39731977 + 527.06 NA Intergenic L1M3|LINE|L1 -273556 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 183505-4 chr14 61372281 61372921 + 527.06 NA intron (NM_006255, intron 1 of 13) L1MC3|LINE|L1 51158 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding 265902 chr13 112086271 112087376 + 527.06 NA intron (NR_120392, intron 1 of 3) L1ME1|LINE|L1 19674 NM_005986 6656 NM_005986 ENSG00000182968 SOX1 - SRY-box transcription factor 1 protein-coding 390200 chr7 46470970 46472791 + 527.06 NA Intergenic Intergenic 225242 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 314743 chr1 116143583 116144752 + 527.06 NA Intergenic L1ME3D|LINE|L1 32412 NM_152367 126868 Hs.376194 NM_152367 ENSG00000173212 MAB21L3 C1orf161 mab-21 like 3 protein-coding 300863 chr18 7377332 7378350 + 527.06 NA Intergenic LTR82B|LTR|ERVL 83165 NM_001364581 112577592 NM_001364581 LOC112577592 - uncharacterized LOC112577592 protein-coding 198877-5 chr2 49056277 49057058 + 527.06 NA intron (NM_000145, intron 2 of 9) L1M2c|LINE|L1 -2936 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA 210648-4 chr2 234765803 234766790 + 527.06 NA Intergenic Intergenic 83628 NR_132376 106144537 Hs.580616 NR_132376 ENSG00000280744 LINC01173 - long intergenic non-protein coding RNA 1173 ncRNA 230589-5 chr8 46321480 46322378 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 295714 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 193958-6 chr3 178700065 178701062 + 527.06 NA intron (NM_001278911, intron 1 of 4) intron (NM_001278911, intron 1 of 4) 141713 NM_005832 10242 Hs.478368 NM_005832 ENSG00000197584 KCNMB2 - potassium calcium-activated channel subfamily M regulatory beta subunit 2 protein-coding 245171 chr22 34732626 34733727 + 527.06 NA Intergenic LTR33|LTR|ERVL 264740 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 196857 chr10 22895306 22896113 + 527.06 NA Intergenic L1MEf|LINE|L1 -32315 NM_001282747 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding 205378-8 chr21 32078932 32079656 + 527.06 NA Intergenic L1ME4a|LINE|L1 7001 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA 225230-4 chr8 134191127 134192246 + 527.06 NA Intergenic Intergenic 305190 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 179025 chr12 133054200 133055037 + 527.06 NA intron (NM_001127372, intron 4 of 4) Kanga2_a|DNA|TcMar-Tc2 17036 NM_001289972 7637 Hs.445019 NM_003428 ENSG00000198040 ZNF84 HPF2 zinc finger protein 84 protein-coding 195979-4 chr16 86646986 86647963 + 527.06 NA Intergenic Intergenic 68965 NM_005250 2300 Hs.533830 NM_005250 ENSG00000176678 FOXL1 FKH6|FKHL11|FREAC7 forkhead box L1 protein-coding 460826 chr1 179718006 179720016 + 527.06 NA Intergenic Intergenic -8765 NM_001329713 148753 Hs.400696 NM_173509 ENSG00000143340 FAM163A C1orf76|NDSP family with sequence similarity 163 member A protein-coding 344522 chr19 30194885 30196169 + 527.06 NA Intergenic L1MC4a|LINE|L1 -176857 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 204148-4 chr4 105096747 105097638 + 527.06 NA Intergenic L1M4|LINE|L1 -48683 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 196154-5 chr4 166376833 166377743 + 527.06 NA Intergenic L1M1|LINE|L1 504051 NM_012464 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding 286194-2 chr20 46459656 46461068 + 527.06 NA Intergenic L1MC4|LINE|L1 -2719 NR_045983 100130934 Hs.712133 NM_173643 ZNF663P ZNF663 zinc finger protein 663, pseudogene pseudo 239198-2 chr8 134385541 134386753 + 527.06 NA Intergenic L2c|LINE|L2 -211924 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 200459-2 chr1 221100740 221101767 + 527.06 NA Intergenic Intergenic -221113 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA 222771 chr16 12134218 12135318 + 527.06 NA intron (NM_032167, intron 13 of 20) intron (NM_032167, intron 13 of 20) 158034 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding 298492-2 chr5 108372582 108373572 + 527.06 NA intron (NM_001163315, intron 1 of 8) L1M4|LINE|L1 9021 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding 341623 chrX 58341885 58343188 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -431903 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 287336-2 chr22 43703395 43704782 + 527.06 NA intron (NM_198856, intron 8 of 29) L1M3b|LINE|L1 108217 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding 182714-7 chr3 139412346 139413245 + 527.06 NA intron (NR_121609, intron 1 of 4) L1PB2|LINE|L1 22992 NR_121609 100507291 Hs.97661 NR_121608 ENSG00000248932 LOC100507291 - uncharacterized LOC100507291 ncRNA 181397-4 chr3 123854646 123855379 + 527.06 NA intron (NM_001321309, intron 2 of 32) L1MEi|LINE|L1 29320 NM_001321309 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding 221277-3 chr2 105834422 105835402 + 527.06 NA intron (NM_003581, intron 2 of 4) AluJo|SINE|Alu -16935 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding 204324-5 chr8 126071516 126072358 + 527.06 NA Intergenic MIR|SINE|MIR -120740 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 315885 chr8 127466725 127467975 + 527.06 NA intron (NR_024393, intron 4 of 4) MIR3|SINE|MIR 14789 NR_024393 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA 258172 chr5 123684949 123685772 + 527.06 NA Intergenic L1PA16|LINE|L1 139943 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 282329-4 chr3 179492759 179493835 + 527.06 NA Intergenic L1M3c|LINE|L1 -41827 NM_021629 59345 Hs.173030 NM_021629 ENSG00000114450 GNB4 CMTD1F G protein subunit beta 4 protein-coding 187546-2 chr15 56584837 56585754 + 527.06 NA Intergenic AluSx|SINE|Alu -120158 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding 186140-6 chr2 67660839 67661610 + 527.06 NA Intergenic Intergenic 164338 NR_110271 101927701 Hs.348697 NR_110271 ENSG00000237013 LINC01812 - long intergenic non-protein coding RNA 1812 ncRNA 401532 chr11 114191103 114192936 + 527.06 NA intron (NM_006006, intron 4 of 6) MLT1H|LTR|ERVL-MaLR -103794 NM_006169 4837 Hs.503911 NM_006169 ENSG00000166741 NNMT - nicotinamide N-methyltransferase protein-coding 181309 chr1 179487429 179488318 + 527.06 NA intron (NR_073544, intron 17 of 25) AluJo|SINE|Alu 88075 NM_001297575 7827 Hs.412710 NM_014625 ENSG00000116218 NPHS2 PDCN|SRN1 NPHS2 stomatin family member, podocin protein-coding 308418 chr11 76775487 76777026 + 527.06 NA Intergenic L1M4c|LINE|L1 -6057 NM_001258210 25987 Hs.8361 NM_015516 ENSG00000182704 TSKU E2IG4|LRRC54|TSK tsukushi, small leucine rich proteoglycan protein-coding 184822 chr10 21024028 21024624 + 527.06 NA intron (NM_001173484, intron 2 of 6) intron (NM_001173484, intron 2 of 6) -126724 NM_006393 10529 Hs.5025 NM_006393 ENSG00000078114 NEBL LASP2|LNEBL nebulette protein-coding 187809-9 chr3 118857138 118858255 + 527.06 NA Intergenic Tigger1|DNA|TcMar-Tigger -46863 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA 255449 chr12 65541190 65542380 + 527.06 NA intron (NR_120433, intron 3 of 4) intron (NR_120433, intron 3 of 4) 15526 NR_135033 105369187 Hs.738044 NR_135033 ENSG00000250748 LOC105369187 - uncharacterized LOC105369187 ncRNA 436669 chr5 66483224 66484724 + 527.06 NA Intergenic L1MB7|LINE|L1 27630 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA 192201-2 chr12 10479886 10480500 + 527.06 NA Intergenic L1MA8|LINE|L1 -25508 NM_001304448 3821 Hs.512576 NM_002259 ENSG00000134545 KLRC1 CD159A|NKG2|NKG2A killer cell lectin like receptor C1 protein-coding 421648 chr1 228198643 228199958 + 527.06 NA Intergenic L1M4b|LINE|L1 -8744 NM_052843 84033 Hs.650039 NM_052843 ENSG00000154358 OBSCN ARHGEF30|UNC89 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF protein-coding 185701-5 chr5 167363866 167364536 + 527.06 NA intron (NM_001122679, intron 2 of 29) L1MEf|LINE|L1 -195800 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA 367186 chr14 59406824 59408391 + 527.06 NA Intergenic Intergenic 57773 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding 209243-6 chr7 99937602 99938563 + 527.06 NA Intergenic L1M4|LINE|L1 -8462 NM_181538 349149 Hs.647524 NM_181538 ENSG00000176402 GJC3 CX29|CX30.2|CX31.3|GJE1 gap junction protein gamma 3 protein-coding 216534-7 chr8 37203565 37204387 + 527.06 NA Intergenic Intergenic 289937 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA 245083 chr1 33806697 33807626 + 527.06 NA intron (NM_052896, intron 10 of 69) L1ME3E|LINE|L1 -53314 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding 191235 chr10 39374104 39374670 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 677791 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 817031 chr8 115166599 115169654 + 527.06 NA Intergenic L1MB3|LINE|L1 499887 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 339251 chr19 44482692 44483964 + 527.06 NA intron (NM_001278508, intron 2 of 3) intron (NM_001278508, intron 2 of 3) 17194 NM_001278508 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding 252198-3 chr19 27574854 27575576 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -218216 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 231907-2 chr8 135018003 135019103 + 527.06 NA Intergenic Intergenic 168618 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 191762-10 chr3 97137616 97138610 + 527.06 NA intron (NM_001080448, intron 3 of 17) L1PA15-16|LINE|L1 -301494 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 414445 chr7 62766794 62768251 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 536534 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 245698 chr1 193984494 193985461 + 527.06 NA Intergenic LTR108d_Mam|LTR|ERVL 680232 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 227251-2 chr10 48733777 48734758 + 527.06 NA intron (NM_020945, intron 10 of 61) intron (NM_020945, intron 10 of 61) 48804 NM_020945 57705 Hs.287379 NM_020945 ENSG00000128815 WDFY4 C10orf64 WDFY family member 4 protein-coding 242887 chr8 135270706 135272028 + 527.06 NA intron (NR_120396, intron 1 of 4) L2a|LINE|L2 37236 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 359543 chr7 64979298 64981077 + 527.06 NA intron (NM_001348050, intron 3 of 3) intron (NM_001348050, intron 3 of 3) 10849 NM_015852 51351 Hs.250693 NM_015852 ENSG00000152926 ZNF117 H-plk|HPF9 zinc finger protein 117 protein-coding 190532-3 chr15 26252482 26253194 + 527.06 NA Intergenic L1MB3|LINE|L1 137025 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA 178937-2 chr14 62495969 62496783 + 527.06 NA Intergenic L1M4c|LINE|L1 -356403 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 190708-5 chr11 63356336 63357017 + 527.06 NA Intergenic L1PA12|LINE|L1 -13109 NM_080866 114571 Hs.502772 NM_080866 ENSG00000149742 SLC22A9 HOAT4|OAT4|OAT7|UST3H|ust3 solute carrier family 22 member 9 protein-coding 292079-2 chr20 42275666 42277129 + 527.06 NA intron (NM_133170, intron 13 of 31) intron (NM_133170, intron 13 of 31) -409086 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 200898-2 chr2 26895026 26895753 + 527.06 NA intron (NM_001253724, intron 1 of 12) L1MD|LINE|L1 46965 NM_001253724 56896 Hs.299315 NM_020134 ENSG00000157851 DPYSL5 CRAM|CRMP-5|CRMP5|Ulip6 dihydropyrimidinase like 5 protein-coding 326777 chr2 45323695 45325128 + 527.06 NA Intergenic Intergenic -69470 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA 192289-4 chr2 16356999 16357826 + 527.06 NA Intergenic Intergenic 306985 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA 208716-2 chr1 176352452 176353355 + 527.06 NA Intergenic L1MA9|LINE|L1 -110272 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding 376672 chr8 139998186 139999920 + 527.06 NA intron (NM_001160372, intron 18 of 22) L1MEf|LINE|L1 101482 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 185262 chr1 37104160 37104890 + 527.06 NA Intergenic L2c|LINE|L2 -57038 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA 264321 chr1 233561969 233562947 + 527.06 NA Intergenic L1MA5|LINE|L1 -51648 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding 186140 chr10 67478258 67479134 + 527.06 NA intron (NM_001127384, intron 5 of 17) L1PA16|LINE|L1 -75286 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA 204412-2 chr2 9065150 9066080 + 527.06 NA Intergenic MER67C|LTR|ERV1 -61931 NR_135601 129642 Hs.467634 NM_138799 ENSG00000143797 MBOAT2 LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2 membrane bound O-acyltransferase domain containing 2 protein-coding 457400 chr8 117532656 117534711 + 527.06 NA intron (NM_080651, intron 3 of 3) HAL1|LINE|L1 12970 NM_080651 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 237177 chr1 227645223 227645912 + 527.06 NA intron (NR_102302, intron 2 of 5) intron (NR_102302, intron 2 of 5) 52140 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 179464-3 chr20 59369830 59370583 + 527.06 NA Intergenic Intergenic 69595 NM_207034 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding 215128-4 chr14 49432390 49433018 + 527.06 NA Intergenic L1PA15|LINE|L1 153676 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 441589 chr19 36818491 36820336 + 527.06 NA exon (NM_001242802, exon 5 of 5) exon (NM_001242802, exon 5 of 5) 18614 NM_001242802 388536 Hs.282067 NM_206894 ENSG00000197863 ZNF790 - zinc finger protein 790 protein-coding 189039-10 chr9 27670126 27670832 + 527.06 NA Intergenic Intergenic -96613 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 374564 chr8 79550108 79551854 + 527.06 NA Intergenic L1MEg|LINE|L1 -60136 NM_001199214 11075 Hs.521651 NM_007029 ENSG00000104435 STMN2 SCG10|SCGN10 stathmin 2 protein-coding 186667-3 chr4 41024227 41024937 + 527.06 NA intron (NM_173075, intron 5 of 16) LTR76|LTR|ERV1 -167390 NM_001166053 323 Hs.479602 NM_004307 ENSG00000163697 APBB2 FE65L|FE65L1 amyloid beta precursor protein binding family B member 2 protein-coding 264760 chr22 49612162 49613021 + 527.06 NA intron (NR_110523, intron 1 of 4) L1ME4a|LINE|L1 44928 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding 214953-3 chr7 61737319 61738150 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 1566322 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 204587-8 chr8 122413880 122414585 + 527.06 NA TTS (NR_131202) TTS (NR_131202) 154412 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 234366-3 chr5 165508527 165509525 + 527.06 NA Intergenic L1M4|LINE|L1 1038747 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA 355414 chr15 67873574 67874893 + 527.06 NA Intergenic L1M4|LINE|L1 -34188 NR_104088 101954278 NR_104088 ENSG00000202337 RNU6-8 U6-8 RNA, U6 small nuclear 8 snRNA 203972-9 chr8 91847156 91848121 + 527.06 NA Intergenic L1M3f|LINE|L1 170042 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 495437 chr1 157792048 157794114 + 527.06 NA Intergenic Intergenic -15949 NR_125358 79368 Hs.437393 NM_030764 ENSG00000132704 FCRL2 CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C Fc receptor like 2 protein-coding 514410 chr6 168010322 168013035 + 527.06 NA Intergenic L1M2c|LINE|L1 -6195 NM_005355 3834 Hs.150013 NM_005355 ENSG00000125337 KIF25 KNSL3 kinesin family member 25 protein-coding 325635 chr10 75569750 75571047 + 527.06 NA intron (NM_001305581, intron 2 of 6) L2b|LINE|L2 17940 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA 203094-2 chr3 40811187 40811838 + 527.06 NA Intergenic L1MB8|LINE|L1 286552 NM_001098414 285268 Hs.19977 NM_198484 ENSG00000172888 ZNF621 - zinc finger protein 621 protein-coding 207750 chr10 65277331 65278118 + 527.06 NA Intergenic BLACKJACK|DNA|hAT-Blackjack -293701 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 189127-2 chr5 46068564 46069368 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -372586 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 279869 chr10 90134813 90135873 + 527.06 NA Intergenic LTR9B|LTR|ERV1 -177970 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA 183593 chr1 23876537 23877337 + 527.06 NA intron (NM_001841, intron 1 of 1) intron (NM_001841, intron 1 of 1) -8568 NM_000147 2517 Hs.370858 NM_000147 ENSG00000179163 FUCA1 FUCA alpha-L-fucosidase 1 protein-coding 205641-2 chr11 83363512 83364150 + 527.06 NA Intergenic MIRc|SINE|MIR -77424 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 188512-6 chr9 13297532 13298320 + 527.06 NA Intergenic L1M5|LINE|L1 -18213 NM_001330637 8777 Hs.169378 NM_003829 ENSG00000107186 MPDZ HYC2|MUPP1 multiple PDZ domain crumbs cell polarity complex component protein-coding 179376-6 chr2 118888679 118889308 + 527.06 NA Intergenic Intergenic -40810 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding 230325-2 chr8 104333984 104335234 + 527.06 NA Intergenic L1ME1|LINE|L1 -5187 NM_001257317 81501 Hs.652230 NM_030788 ENSG00000164935 DCSTAMP FIND|TM7SF4|hDC-STAMP dendrocyte expressed seven transmembrane protein protein-coding 294539-2 chr3 79815323 79816733 + 527.06 NA Intergenic L1PA15-16|LINE|L1 -48030 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding 245874-3 chr6 125459183 125459852 + 527.06 NA Intergenic THE1A|LTR|ERVL-MaLR -157550 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding 302006 chr4 62422543 62423962 + 527.06 NA Intergenic HERVL-int|LTR|ERVL -261487 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 447211-2 chr4 77550517 77552437 + 527.06 NA intron (NM_006419, intron 1 of 4) L1PA15-16|LINE|L1 39724 NM_006419 10563 Hs.100431 NM_006419 ENSG00000156234 CXCL13 ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13 C-X-C motif chemokine ligand 13 protein-coding 209594-4 chr16 83098171 83099057 + 527.06 NA intron (NM_001220489, intron 3 of 12) L1MEc|LINE|L1 -108316 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA 184822-5 chr20 52213534 52214143 + 527.06 NA Intergenic MLT1D|LTR|ERVL-MaLR -21853 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding 301303 chr2 117592423 117593505 + 527.06 NA Intergenic L1PB1|LINE|L1 -221727 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 205202-10 chr5 53289202 53289909 + 527.06 NA Intergenic LTR50|LTR|ERVL 179713 NR_104654 257396 Hs.12326 NR_034107 ENSG00000247796 LOC257396 - uncharacterized LOC257396 ncRNA 212932-2 chr15 81994100 81995078 + 527.06 NA Intergenic L1M1|LINE|L1 51429 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding 275828-2 chr9 27884466 27885709 + 527.06 NA Intergenic L1MEf|LINE|L1 -311221 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 177707-4 chr19 52385125 52385841 + 527.06 NA 3' UTR (NM_001145434, exon 4 of 4) 3' UTR (NM_001145434, exon 4 of 4) 12274 NR_125345 102724105 Hs.188680 NR_125345 ENSG00000269834 ZNF528-AS1 - ZNF528 antisense RNA 1 ncRNA 333541 chr12 34470259 34472029 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 448648 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 227602 chr10 53334494 53335368 + 527.06 NA Intergenic Intergenic -563231 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 190005 chr1 227653988 227654691 + 527.06 NA exon (NM_001367910, exon 5 of 5) exon (NM_001367910, exon 5 of 5) 43368 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 190708-8 chr3 32618829 32619675 + 527.06 NA Intergenic L1M4|LINE|L1 -48328 NM_001329135 51143 Hs.529495 NM_016141 ENSG00000144635 DYNC1LI1 DLC-A|DNCLI1|LIC1 dynein cytoplasmic 1 light intermediate chain 1 protein-coding 199141-6 chr5 150905416 150906291 + 527.06 NA promoter-TSS (NM_001172832) promoter-TSS (NM_001172832) -870 NM_001172831 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 213284 chr19 12354119 12355286 + 527.06 NA intron (NM_030824, intron 3 of 5) AluSx|SINE|Alu 10981 NM_001363774 79973 Hs.253193 NM_030824 ENSG00000198342 ZNF442 - zinc finger protein 442 protein-coding 180869-2 chr19 32838166 32838956 + 527.06 NA intron (NM_001126335, intron 11 of 12) L1MCa|LINE|L1 31206 NM_001243036 11136 Hs.743345 NM_014270 ENSG00000021488 SLC7A9 BAT1|CSNU3 solute carrier family 7 member 9 protein-coding 200283-3 chr4 43234649 43235516 + 527.06 NA Intergenic Intergenic 257461 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 217149-2 chr12 37844364 37845254 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -471965 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 208365-2 chr11 23001301 23002240 + 527.06 NA Intergenic MER115|DNA|hAT-Tip100 -141296 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding 238934-4 chr8 135926536 135927441 + 527.06 NA Intergenic Intergenic 469532 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 341886 chr2 39835731 39837111 + 527.06 NA Intergenic L1PA15-16|LINE|L1 -57145 NM_001321480 80745 Hs.468254 NM_025264 ENSG00000138050 THUMPD2 C2orf8 THUMP domain containing 2 protein-coding 225230-5 chr9 25340245 25341102 + 527.06 NA Intergenic L1MA4A|LINE|L1 338185 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 273808-2 chr5 92873723 92874698 + 527.06 NA Intergenic L1MA6|LINE|L1 697133 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 280132 chr3 123847307 123848414 + 527.06 NA intron (NM_001321309, intron 2 of 32) L1ME3Cz|LINE|L1 36472 NM_001321309 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding 254746-2 chr17 71357911 71359036 + 527.06 NA Intergenic Intergenic -156294 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 283734 chr1 114072898 114073701 + 527.06 NA Intergenic Intergenic 79141 NM_205848 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding 193958 chr1 174321500 174322455 + 527.06 NA intron (NM_001366445, intron 11 of 13) L1ME2z|LINE|L1 46877 NM_001366449 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding 227075-2 chr15 70333178 70334036 + 527.06 NA Intergenic L1ME2|LINE|L1 172321 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA 303499 chr6 153521932 153523262 + 527.06 NA Intergenic Intergenic -391315 NM_012419 26575 Hs.166313 NM_012419 ENSG00000091844 RGS17 RGS-17|RGSZ2|hRGS17 regulator of G protein signaling 17 protein-coding 229710-3 chr19 12627807 12628623 + 527.06 NA exon (NM_153358, exon 4 of 4) exon (NM_153358, exon 4 of 4) 17295 NM_153358 163049 Hs.720677 NM_153358 ENSG00000173875 ZNF791 - zinc finger protein 791 protein-coding 286194-3 chr3 159598562 159599924 + 527.06 NA intron (NM_001197108, intron 1 of 6) L1MA4A|LINE|L1 169369 NR_121669 100874433 Hs.601476 NR_121669 IQCJ-SCHIP1-AS1 uaz98 IQCJ-SCHIP1 readthrough antisense RNA 1 ncRNA 302357 chr1 80144311 80145635 + 527.06 NA Intergenic L1M2|LINE|L1 -390782 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 267132 chr10 39387707 39388829 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 691672 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 185437 chr1 244577243 244577973 + 527.06 NA intron (NM_001130957, intron 11 of 21) MLT1A0|LTR|ERVL-MaLR -75440 NR_123736 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding 203357-2 chr11 83366920 83367671 + 527.06 NA Intergenic MER34C_|LTR|ERV1 -80888 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 182187-3 chr12 7740884 7741580 + 527.06 NA intron (NM_001371391, intron 3 of 5) AluSp|SINE|Alu 6143 NM_001371390 177531-3 chr15 27561482 27562099 + 527.06 NA Intergenic L1ME1|LINE|L1 -400471 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 369294 chr1 30623870 30625345 + 527.06 NA Intergenic L1MEd|LINE|L1 -94165 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 268098 chr11 96544089 96544925 + 527.06 NA Intergenic L1MEd|LINE|L1 36082 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 225758 chr5 156604167 156605173 + 527.06 NA intron (NM_001128209, intron 5 of 7) (AT)n|Simple_repeat|Simple_repeat -245625 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding 230589-4 chr5 171066240 171066999 + 527.06 NA intron (NM_022897, intron 14 of 27) L1MA8|LINE|L1 204601 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding 198350-3 chr2 186770491 186771219 + 527.06 NA Intergenic MER47C|DNA|TcMar-Tigger 76795 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding 182099-5 chr4 154585829 154586324 + 527.06 NA exon (NM_000508, exon 5 of 6) exon (NM_000508, exon 5 of 6) 4666 NM_000508 2243 Hs.351593 NM_000508 ENSG00000171560 FGA Fib2 fibrinogen alpha chain protein-coding 219257-2 chr2 199707782 199708554 + 527.06 NA Intergenic L1MEc|LINE|L1 100100 NR_110270 101927641 Hs.549598 NR_110270 ENSG00000238217 LINC01877 - long intergenic non-protein coding RNA 1877 ncRNA 203884-2 chr12 76424351 76425252 + 527.06 NA intron (NM_001003712, intron 3 of 22) HAL1|LINE|L1 -1516 NM_001319655 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding 243326 chr10 11307801 11308848 + 527.06 NA intron (NM_001025076, intron 9 of 13) L1M4b|LINE|L1 36350 NR_126062 414196 Hs.729598 NM_001012713 CELF2-AS1 C10orf31 CELF2 antisense RNA 1 ncRNA 177707-8 chr7 99865803 99866458 + 527.06 NA TTS (NM_022820) TTS (NM_022820) 10903 NM_001005276 81392 Hs.647523 NM_001005276 ENSG00000244623 OR2AE1 OR2AE2 olfactory receptor family 2 subfamily AE member 1 protein-coding 302796-2 chr14 60427728 60428599 + 527.06 NA Intergenic L1MA4A|LINE|L1 57900 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 190181 chr11 116002762 116003789 + 527.06 NA Intergenic L1ME3Cz|LINE|L1 -243075 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA 313864-2 chr5 27204927 27206473 + 527.06 NA Intergenic Intergenic -167114 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 269503-2 chr11 26824967 26825985 + 527.06 NA Intergenic Intergenic -103416 NM_178498 159963 Hs.148907 NM_178498 ENSG00000148942 SLC5A12 SMCT2 solute carrier family 5 member 12 protein-coding 186491-3 chr7 72161899 72162701 + 527.06 NA intron (NM_001363460, intron 2 of 5) L1M4a1|LINE|L1 175091 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding 234893-3 chr8 138421333 138422355 + 527.06 NA intron (NM_001362965, intron 1 of 19) L1PA15|LINE|L1 75417 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 241042 chr6 40669660 40670737 + 527.06 NA Intergenic Intergenic -82834 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 179464-8 chr5 141314321 141315164 + 527.06 NA Intergenic Intergenic 6042 NM_005642 6879 Hs.438838 NM_005642 ENSG00000178913 TAF7 TAF2F|TAFII55 TATA-box binding protein associated factor 7 protein-coding 318344 chr8 144970726 144971819 + 527.06 NA Intergenic ERVL-E-int|LTR|ERVL -20392 NM_006958 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding 211000-4 chr20 54543644 54544513 + 527.06 NA intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 68485 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 221365-2 chr5 133563273 133564174 + 527.06 NA intron (NM_015082, intron 3 of 15) intron (NM_015082, intron 3 of 15) 48818 NM_015082 23105 Hs.483390 NM_015082 ENSG00000053108 FSTL4 - follistatin like 4 protein-coding 190005-6 chr9 82779836 82780379 + 527.06 NA Intergenic MLT1I|LTR|ERVL-MaLR 283035 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 182539-5 chr7 81041981 81042827 + 527.06 NA Intergenic Intergenic -120015 NM_001350120 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding 212844-2 chr12 118698017 118698838 + 527.06 NA Intergenic Intergenic 63252 NR_134999 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA 278991 chr5 46119591 46120846 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -423838 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 473212 chr7 48326109 48327883 + 527.06 NA intron (NM_152701, intron 27 of 61) intron (NM_152701, intron 27 of 61) 155538 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding 303235 chr6 50500558 50501700 + 527.06 NA Intergenic L1MA4A|LINE|L1 -212415 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding 202918-6 chr6 40028949 40029645 + 527.06 NA Intergenic Intergenic -94835 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 201952 chr10 39172964 39173801 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 476786 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 272139-2 chr10 29297157 29298134 + 527.06 NA intron (NM_032517, intron 3 of 4) Tigger7|DNA|TcMar-Tigger 8575 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding 284788 chr1 181163580 181164728 + 527.06 NA Intergenic L1MEi|LINE|L1 -10330 NR_125966 101928973 Hs.637822 NR_125966 ENSG00000237292 LINC01732 - long intergenic non-protein coding RNA 1732 ncRNA 357962 chr22_KI270736v1_random 156984 158759 + 527.06 NA NA (GAATG)n|Satellite|Satellite NA NA 225318-2 chr21 29254730 29255647 + 527.06 NA intron (NR_027072, intron 1 of 1) L1ME1|LINE|L1 -43734 NM_001186 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding 285315-4 chr8 118983725 118985037 + 527.06 NA intron (NM_001324095, intron 1 of 7) L1PREC2|LINE|L1 32118 NM_001324095 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding 238407 chr2 48092007 48093080 + 527.06 NA Intergenic Intergenic -186750 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding 236387-2 chr14 60956849 60957949 + 527.06 NA intron (NM_001177963, intron 6 of 6) THE1B|LTR|ERVL-MaLR 23680 NM_001350254 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding 185174-2 chr4 111351249 111351829 + 527.06 NA Intergenic Intergenic -490892 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA 186316-5 chr6 39262152 39262875 + 527.06 NA Intergenic Intergenic -33038 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding 182890-8 chr8 109634418 109635073 + 527.06 NA intron (NM_001099746, intron 1 of 5) intron (NM_001099746, intron 1 of 5) 8445 NM_001099756 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding 209419-3 chr8 87704577 87705248 + 527.06 NA Intergenic L1MA3|LINE|L1 169103 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 229008-2 chr2 198178240 198178999 + 527.06 NA Intergenic L1MA9|LINE|L1 196478 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA 285403-2 chr7 53103405 53104392 + 527.06 NA Intergenic L1M4|LINE|L1 68265 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 281450-3 chr5 44927326 44928327 + 527.06 NA Intergenic L2c|LINE|L2 118879 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 251232 chr9 19814474 19815472 + 527.06 NA Intergenic L4_B_Mam|LINE|RTE-X -27954 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding 358840 chr5 14540452 14542009 + 527.06 NA Intergenic L1M2|LINE|L1 -40562 NM_019018 54491 Hs.155085 NM_019018 ENSG00000145569 OTULINL FAM105A|NET20 OTU deubiquitinase with linear linkage specificity like protein-coding 215743 chr19 52112962 52113742 + 527.06 NA non-coding (NR_135823, exon 5 of 5) non-coding (NR_135823, exon 5 of 5) -17587 NM_001369830 284371 Hs.665751 NM_001136499 ENSG00000197608 ZNF841 - zinc finger protein 841 protein-coding 191147-5 chr5 5283661 5284423 + 527.06 NA intron (NM_139056, intron 18 of 22) intron (NM_139056, intron 18 of 22) -138635 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding 209770 chr1 187834559 187835532 + 527.06 NA Intergenic L1MC2|LINE|L1 391417 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 259489-3 chr2 27579311 27580517 + 527.06 NA exon (NM_032266, exon 1 of 1) exon (NM_032266, exon 1 of 1) -3055 NM_001271318 84450 Hs.529178 NM_032434 ENSG00000243943 ZNF512 - zinc finger protein 512 protein-coding 331169 chr18 11543311 11544629 + 527.06 NA Intergenic Intergenic 53922 NR_110778 101927433 Hs.331210 NR_110778 ENSG00000267252 LINC01255 - long intergenic non-protein coding RNA 1255 ncRNA 218027-3 chr6 71243419 71244407 + 527.06 NA Intergenic L1PB1|LINE|L1 -44898 NM_001324266 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding 268098-2 chr22 33230690 33231724 + 527.06 NA Intergenic Intergenic 122678 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA 214074-2 chr16 13741600 13742502 + 527.06 NA Intergenic Intergenic -178106 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 206520 chr11 50396224 50397066 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -12502 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 199229-2 chr7 31944931 31945786 + 527.06 NA intron (NM_001322059, intron 3 of 17) L1MCa|LINE|L1 125049 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 189654 chr6 40004827 40005538 + 527.06 NA Intergenic L1ME3F|LINE|L1 -70720 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 207135-7 chr6 120708219 120708817 + 527.06 NA Intergenic L1MC|LINE|L1 625962 NM_001367760 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding 244292 chr10 43014801 43015774 + 527.06 NA Intergenic L1M4|LINE|L1 17724 NR_049836 100847014 NR_049836 ENSG00000263795 MIR5100 - microRNA 5100 ncRNA 262037-3 chr8 88628423 88629450 + 527.06 NA Intergenic L1MCb|LINE|L1 -301453 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 184471-9 chr8 136221774 136222517 + 527.06 NA Intergenic L1PA16|LINE|L1 -308653 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 269416 chr8 129783674 129784893 + 527.06 NA intron (NM_031415, intron 1 of 13) L1MA2|LINE|L1 2341 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 236123 chr10 58881854 58882652 + 527.06 NA Intergenic L1MA5|LINE|L1 -117265 NR_108046 100507008 Hs.170953 NR_108046 LINC00844 - long intergenic non-protein coding RNA 844 ncRNA 272841 chr14 31651838 31652899 + 527.06 NA intron (NM_001201573, intron 2 of 8) L1MA8|LINE|L1 -62201 NM_001201574 80224 Hs.288981 NM_025152 ENSG00000151413 NUBPL C14orf127|IND1|MC1DN21|huInd1 nucleotide binding protein like protein-coding 195539-7 chr7 56161771 56162740 + 527.06 NA Intergenic LTR1A1|LTR|ERV1 -45838 NM_001145712 389493 Hs.177948 NM_001145712 ENSG00000185290 NUPR2 NUPR1L nuclear protein 2, transcriptional regulator protein-coding 292167 chr7 21494216 21495727 + 527.06 NA intron (NM_003112, intron 5 of 5) L1ME1|LINE|L1 23913 NR_031594 100302122 NR_031594 ENSG00000221783 MIR1183 MIRN1183|hsa-mir-1183 microRNA 1183 ncRNA 230062-6 chr8 127343645 127344356 + 527.06 NA intron (NR_117099, intron 3 of 3) L2a|LINE|L2 -56399 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA 246576-3 chr4 30562879 30563980 + 527.06 NA Intergenic L1MA6|LINE|L1 -156940 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 301478-2 chr8 144986785 144987857 + 527.06 NA intron (NR_023392, intron 4 of 4) L1PA8|LINE|L1 -7544 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 275565-2 chr12 16643879 16645261 + 527.06 NA Intergenic HAL1b|LINE|L1 -36356 NR_045014 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding 279254-2 chr8 83611966 83613067 + 527.06 NA Intergenic Intergenic 208758 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 524074 chrUn_GL000216v2 69584 72413 + 527.06 NA NA (TTCCATTCCA)n|Simple_repeat|Simple_repeat NA NA 221717-3 chr5 30290841 30291818 + 527.06 NA Intergenic Intergenic 410769 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 254482-4 chr7 62920692 62921505 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 382958 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 222683 chr18 35871564 35872362 + 527.06 NA Intergenic L1M5|LINE|L1 32963 NR_029616 406963 NR_029616 ENSG00000207797 MIR187 MIRN187|miR-187|miRNA187 microRNA 187 ncRNA 224967-2 chr4 103316615 103317733 + 527.06 NA Intergenic L1M4c|LINE|L1 -107868 NR_125925 101929448 Hs.570839 NR_125925 ENSG00000248740 LINC02428 - long intergenic non-protein coding RNA 2428 ncRNA 261334-2 chr7 19602747 19604112 + 527.06 NA Intergenic L1PA16|LINE|L1 102007 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA 202128-3 chr17 71057548 71058443 + 527.06 NA Intergenic Intergenic 144184 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 235420-4 chr7 64526178 64527530 + 527.06 NA intron (NM_001130022, intron 3 of 3) L1MB2|LINE|L1 36217 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding 447211 chr22 24907369 24909404 + 527.06 NA intron (NM_001098498, intron 20 of 23) L1MB7|LINE|L1 38309 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding 179113 chr1 187463934 187464800 + 527.06 NA intron (NR_132374, intron 1 of 2) L1PB4|LINE|L1 20739 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 180079-5 chr4 33706560 33707214 + 527.06 NA Intergenic L1MB1|LINE|L1 333006 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 209243-5 chr2 52899915 52900583 + 527.06 NA Intergenic Intergenic -197634 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 202128-7 chr8 82278340 82279170 + 527.06 NA Intergenic L1MA1|LINE|L1 -436469 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 185437-4 chr7 62606403 62607034 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 697338 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 189742-5 chr8 135097407 135098237 + 527.06 NA Intergenic L1MDa|LINE|L1 -136309 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 183241-11 chr9 93877510 93878155 + 527.06 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 58475 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA 263881 chr14 66903308 66904171 + 527.06 NA intron (NM_001024218, intron 5 of 21) L1MA4|LINE|L1 -285701 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 204236-2 chr8 87570896 87571434 + 527.06 NA Intergenic AluJo|SINE|Alu 302850 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 210912-2 chr2 97978597 97979565 + 527.06 NA intron (NM_015348, intron 1 of 40) Tigger1|DNA|TcMar-Tigger 16867 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding 309121 chr17 74155615 74157186 + 527.06 NA Intergenic LTR33A_|LTR|ERVL -47278 NM_000999 6169 Hs.380953 NM_000999 ENSG00000172809 RPL38 L38 ribosomal protein L38 protein-coding 210121 chr17 22738252 22738967 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 215498 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding 184471-3 chr12 38984471 38985151 + 527.06 NA Intergenic Intergenic -79220 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding 178322-11 chr9 103147312 103148274 + 527.06 NA intron (NR_121578, intron 8 of 9) L1M1|LINE|L1 152460 NM_001340 1539 Hs.3232 NM_001340 ENSG00000155833 CYLC2 - cylicin 2 protein-coding 219521-4 chr4 76348469 76349358 + 527.06 NA intron (NM_001042784, intron 17 of 23) L1MEg|LINE|L1 42887 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding 255712 chr7 32108968 32109978 + 527.06 NA intron (NM_001322059, intron 3 of 17) MER20|DNA|hAT-Charlie -38037 NM_001322056 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 314655-2 chr4 30410529 30412155 + 527.06 NA Intergenic Intergenic -309027 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 205378-12 chr7 3396664 3397347 + 527.06 NA intron (NM_152744, intron 1 of 44) L1MB4|LINE|L1 95753 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 374125 chr16 68566801 68568377 + 527.06 NA TTS (NR_130978) TTS (NR_130978) 28298 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 245962 chr2 239710047 239711381 + 527.06 NA Intergenic Intergenic -52146 NR_037808 150935 Hs.555582 NR_037808 LOC150935 - uncharacterized LOC150935 ncRNA 178058 chr18 4953677 4954550 + 527.06 NA Intergenic L1PB|LINE|L1 -127069 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 393802 chr8 138419521 138421053 + 527.06 NA intron (NM_001362965, intron 1 of 19) L1PA15|LINE|L1 76974 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 208804-3 chr15 62936372 62937304 + 527.06 NA Intergenic AluSp|SINE|Alu -105909 NM_001365778 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding 478219 chr4 37082827 37084603 + 527.06 NA Intergenic L1MB7|LINE|L1 81936 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA 329852 chr7 383876 384848 + 527.06 NA Intergenic L1MD2|LINE|L1 4937 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA 215304 chr12 9144904 9145668 + 527.06 NA Intergenic L1MB1|LINE|L1 -29057 NM_000014 2 Hs.88556 NM_000014 ENSG00000175899 A2M A2MD|CPAMD5|FWP007|S863-7 alpha-2-macroglobulin protein-coding 218818-2 chr10 43496608 43497563 + 527.06 NA Intergenic Intergenic 59974 NM_001355450 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding 236474-3 chr2 33994806 33995803 + 527.06 NA intron (NR_126403, intron 4 of 5) L1M3e|LINE|L1 -71922 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 505890 chr16 75171168 75173414 + 527.06 NA TTS (NM_153688).2 TTS (NM_153688).2 23240 NM_001318475 162239 Hs.388813 NM_153688 ENSG00000184517 ZFP1 ZNF475 ZFP1 zinc finger protein protein-coding 226021-3 chr14 87419805 87420904 + 527.06 NA Intergenic Intergenic 234940 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA 210648 chr10 118930669 118931561 + 527.06 NA Intergenic L1MD1|LINE|L1 -98599 NM_199461 340719 Hs.591918 NM_199461 ENSG00000188613 NANOS1 EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A nanos C2HC-type zinc finger 1 protein-coding 268361 chr15 58763772 58764681 + 527.06 NA Intergenic Intergenic 6748 NR_135474 101928725 Hs.572321 NR_135474 ENSG00000245975 LOC101928725 - uncharacterized LOC101928725 ncRNA 395032-2 chr7 54198220 54199844 + 527.06 NA Intergenic Intergenic -131665 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 198087 chr14 68096735 68097582 + 527.06 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 273566 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 262037-4 chr8 109857684 109858459 + 527.06 NA Intergenic Intergenic 117700 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 212844-7 chr5 11825943 11826563 + 527.06 NA intron (NM_001288717, intron 1 of 20) L1ME1|LINE|L1 78193 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 270030 chr10 29932389 29933508 + 527.06 NA Intergenic THE1B|LTR|ERVL-MaLR 126638 NM_020848 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding 212757-4 chr5 148599575 148600329 + 527.06 NA intron (NM_001040172, intron 1 of 5) L1ME3|LINE|L1 37109 NM_199453 3360 Hs.483773 NM_000870 ENSG00000164270 HTR4 5-HT4|5-HT4R 5-hydroxytryptamine receptor 4 protein-coding 277409 chr2 115787199 115788241 + 527.06 NA intron (NM_001321912, intron 18 of 25) L1MEc|LINE|L1 443905 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 201952-9 chr7 71761361 71762058 + 527.06 NA Intergenic L1MA9|LINE|L1 -453939 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA 254570-4 chr2 68494874 68496135 + 527.06 NA intron (NM_173545, intron 2 of 9) MSTA-int|LTR|ERVL-MaLR 27919 NM_173545 200558 Hs.720369 NM_173545 ENSG00000169621 APLF APFL|C2orf13|PALF|Xip1|ZCCHH1 aprataxin and PNKP like factor protein-coding 215216-3 chr15 83527983 83529090 + 527.06 NA intron (NM_001324186, intron 2 of 9) L1MA4A|LINE|L1 37922 NM_001324187 6457 Hs.270055 NM_003027 ENSG00000140600 SH3GL3 CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13 SH3 domain containing GRB2 like 3, endophilin A3 protein-coding 208628-4 chr8 144854636 144855642 + 527.06 NA Intergenic LTR2C|LTR|ERV1 -1583 NM_001081003 28991 Hs.493218 NM_014066 ENSG00000170619 COMMD5 HCARG|HT002 COMM domain containing 5 protein-coding 400214 chr1 111677759 111679198 + 527.06 NA intron (NM_001370217, intron 1 of 7) Tigger3a|DNA|TcMar-Tigger 13684 NM_001370217 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding 182890-7 chr8 72900508 72901399 + 527.06 NA intron (NM_004770, intron 2 of 2) L1P4|LINE|L1 -107911 NM_003218 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding 250266-2 chr5 125072698 125073724 + 527.06 NA intron (NR_109882, intron 2 of 5) L1MA9|LINE|L1 36380 NR_109882 101927421 Hs.121305 NR_109882 LOC101927421 - uncharacterized LOC101927421 ncRNA 205202-7 chr18 5186340 5187012 + 527.06 NA intron (NM_001330553, intron 1 of 1) L1MD|LINE|L1 10581 NM_001145194 642597 Hs.437160 NM_001145194 ENSG00000231824 AKAIN1 C18orf42 A-kinase anchor inhibitor 1 protein-coding 213635-2 chr17 73652252 73653136 + 527.06 NA Intergenic MER58A|DNA|hAT-Charlie -8249 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 238319-2 chr4 68205993 68207197 + 527.06 NA intron (NR_104048, intron 2 of 9) L1MA5|LINE|L1 11485 NR_104048 401136 Hs.652046 NM_001129907 ENSG00000250026 TMPRSS11BNL - TMPRSS11B N-terminal like, pseudogene pseudo 397842 chr2 27876018 27877184 + 527.06 NA intron (NM_001287580, intron 1 of 8) L1MB3|LINE|L1 -12108 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding 246664-5 chr17 15706214 15707141 + 527.06 NA intron (NM_020652, intron 4 of 5) intron (NM_020652, intron 4 of 5) 6925 NM_001369438 57335 Hs.585799 NM_020652 ENSG00000187607 ZNF286A ZNF286 zinc finger protein 286A protein-coding 221014 chr7 62783968 62784743 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 519701 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 227514-3 chr3 72224151 72224922 + 527.06 NA Intergenic L1M4b|LINE|L1 73279 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA 203797 chr1 87701207 87702026 + 527.06 NA Intergenic AluSx1|SINE|Alu -329961 NR_038324 100505768 Hs.125247 NR_038324 ENSG00000227290 LINC01364 - long intergenic non-protein coding RNA 1364 ncRNA 291816 chr21 17992888 17993867 + 527.06 NA intron (NM_001204177, intron 1 of 4) L1MA4|LINE|L1 76037 NM_001204175 140578 Hs.283725 NM_024944 ENSG00000154645 CHODL C21orf68|MT75|PRED12 chondrolectin protein-coding 200283 chr14 66000126 66000827 + 527.06 NA Intergenic Intergenic -485895 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 177531-9 chr7 52609632 52610396 + 527.06 NA Intergenic Intergenic -425619 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 222068-4 chr2 74756823 74757873 + 527.06 NA Intergenic Intergenic -75307 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding 183593-10 chr7 61915966 61916902 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 1387622 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 202215-2 chr5 156871404 156872243 + 527.06 NA Intergenic L1MEd|LINE|L1 21528 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding 542345 chr11 54923009 54925868 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 217606 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 180957-7 chr8 82906941 82907721 + 527.06 NA Intergenic L1M5|LINE|L1 -4773 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA 308154 chr2 132464479 132465532 + 527.06 NA intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 31294 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA 229798 chr19 37149904 37151183 + 527.06 NA 3' UTR (NM_152655, exon 6 of 6) 3' UTR (NM_152655, exon 6 of 6) 21893 NM_199126 199704 Hs.659236 NM_152655 ENSG00000196967 ZNF585A - zinc finger protein 585A protein-coding 239637-4 chr18 22655920 22657113 + 527.06 NA Intergenic Intergenic 130321 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 249475-2 chr8 131689282 131690677 + 527.06 NA Intergenic L1M3|LINE|L1 -214114 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 211351-2 chr7 3237314 3238394 + 527.06 NA Intergenic Intergenic -63398 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 183417-6 chr7 71926437 71927127 + 527.06 NA intron (NM_001363460, intron 4 of 5) L1MCa|LINE|L1 410609 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding 182187-10 chr8 133743479 133744068 + 527.06 NA Intergenic Intergenic 33579 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA 205026 chr1 109944452 109945281 + 527.06 NA Intergenic MIRc|SINE|MIR 34017 NM_000757 1435 Hs.173894 NM_000757 ENSG00000184371 CSF1 CSF-1|MCSF colony stimulating factor 1 protein-coding 231204-2 chr5 150952469 150953407 + 527.06 NA Intergenic MER49|LTR|ERV1 -6354 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 289795 chr6 37659437 37660492 + 527.06 NA intron (NM_153487, intron 2 of 16) L1MEd|LINE|L1 37919 NM_153487 266727 Hs.437993 NM_153487 ENSG00000112139 MDGA1 GPIM|MAMDC3 MAM domain containing glycosylphosphatidylinositol anchor 1 protein-coding 362354 chr2 18712332 18713566 + 527.06 NA Intergenic L1MDa|LINE|L1 -123369 NM_001199104 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding 188424-6 chr5 5744999 5745708 + 527.06 NA Intergenic LTR29|LTR|ERV1 322676 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding 579152 chr20 56028234 56030860 + 527.06 NA Intergenic MLT1H|LTR|ERVL-MaLR -24028 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding 278639-3 chr9 96737626 96738679 + 527.06 NA Intergenic Intergenic 12331 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo 274950 chr1 95704143 95705252 + 527.06 NA Intergenic L1M3e|LINE|L1 194581 NR_110621 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA 247894-2 chr20 58218728 58219882 + 527.06 NA intron (NM_001304369, intron 3 of 3) L2a|LINE|L2 9348 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding 251495 chr10 124273883 124274624 + 527.06 NA Intergenic L1ME1|LINE|L1 144670 NM_001322970 4942 Hs.523332 NM_000274 ENSG00000065154 OAT GACR|HOGA|OATASE|OKT ornithine aminotransferase protein-coding 184032-2 chr14 45541375 45542001 + 527.06 NA Intergenic L1MA3|LINE|L1 173914 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 190532-7 chr22 34955705 34956708 + 527.06 NA intron (NR_138042, intron 1 of 4) L1MB4|LINE|L1 41710 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 204675 chr1 14841729 14842680 + 527.06 NA intron (NM_201628, intron 1 of 14) L2a|LINE|L2 -81925 NM_001018000 23254 Hs.368823 NM_015209 ENSG00000189337 KAZN KAZ kazrin, periplakin interacting protein protein-coding 379308-2 chr9 31958981 31960548 + 527.06 NA Intergenic L1PA11|LINE|L1 -424839 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding 337494 chr10 83438125 83439253 + 527.06 NA Intergenic MER101-int|LTR|ERV1 238400 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 271612-2 chr5 9867341 9868657 + 527.06 NA intron (NR_027112, intron 4 of 12) THE1B-int|LTR|ERVL-MaLR 13622 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA 204675-5 chr4 1483677 1484478 + 527.06 NA Intergenic L1MEc|LINE|L1 -77635 NM_001290079 54729 Hs.526396 NM_001290079 ENSG00000235608 NKX1-1 HSPX153|NKX-1.1|SAX2 NK1 homeobox 1 protein-coding 456785 chr14 30146782 30148812 + 527.06 NA Intergenic L1M2|LINE|L1 -219950 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding 285140 chrX 100019760 100020927 + 527.06 NA Intergenic Intergenic 389930 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding 192553 chr4 63346939 63347600 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 1062181 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 222946 chr7 71663103 71664061 + 527.06 NA intron (NM_022479, intron 6 of 10) intron (NM_022479, intron 6 of 10) -355812 NR_037477 100500836 NR_037477 ENSG00000265878 MIR3914-1 - microRNA 3914-1 ncRNA 224615 chr1 33809093 33810155 + 527.06 NA intron (NM_052896, intron 10 of 69) L1ME3E|LINE|L1 -50851 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding 258699 chr7 45631158 45632125 + 527.06 NA intron (NM_001281768, intron 5 of 9) intron (NM_001281768, intron 5 of 9) 57273 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding 182890-2 chr12 41417012 41417592 + 527.06 NA intron (NM_001164595, intron 3 of 9) intron (NM_001164595, intron 3 of 9) -20437 NM_013377 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding 276619-3 chr21 31484916 31486188 + 527.06 NA intron (NM_003253, intron 1 of 28) intron (NM_003253, intron 1 of 28) 73535 NM_001353690 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding 213986 chr1 22940574 22941499 + 527.06 NA Intergenic L1MD|LINE|L1 31830 NM_001289974 646262 NM_001289974 ENSG00000215906 LACTBL1 - lactamase beta like 1 protein-coding 498423 chr5 2481621 2483469 + 527.06 NA Intergenic L1M4|LINE|L1 -170344 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA 346366 chr5 179031733 179032978 + 527.06 NA exon (NM_001136116, exon 5 of 5) exon (NM_001136116, exon 5 of 5) 8551 NM_001353372 345462 Hs.445740 NM_001136116 ENSG00000234284 ZNF879 DKFZp686E2433 zinc finger protein 879 protein-coding 186140-9 chr8 46504052 46504890 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 113172 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 193080-2 chr18 22167084 22167751 + 527.06 NA non-coding (NR_102763, exon 2 of 2) non-coding (NR_102763, exon 2 of 2) 1551 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA 341535 chr5 110470716 110472001 + 527.06 NA intron (NM_001039763, intron 12 of 13) L1MA4|LINE|L1 42557 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA 416465 chr20 29262318 29264000 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 153802 NR_037925 647476 Hs.274541 NR_037925 FRG2EP - FSHD region gene 2 family member E, pseudogene pseudo 248860 chr11 3341980 3342788 + 527.06 NA Intergenic MER30|DNA|hAT-Charlie 36762 NM_001256823 7748 Hs.386294 NM_007152 ENSG00000005801 ZNF195 HRF1|ZNFP104 zinc finger protein 195 protein-coding 263706 chr12 23523727 23524774 + 527.06 NA Intergenic L1MEg|LINE|L1 60336 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 270821-2 chr9 105734211 105735290 + 527.06 NA intron (NM_018112, intron 4 of 5) L1M2a|LINE|L1 40209 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding 227163-2 chr11 98916528 98917640 + 527.06 NA Intergenic AluSq2|SINE|Alu -103865 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 371665 chr10 45496271 45497854 + 527.06 NA intron (NM_001282866, intron 2 of 7) L1M4b|LINE|L1 38309 NM_001282866 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding 206783-2 chr12 34632008 34632758 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 609887 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 190532-9 chr5 33001687 33002646 + 527.06 NA Intergenic L1MEc|LINE|L1 54723 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 239549 chr10 83110009 83110905 + 527.06 NA Intergenic L1PA13|LINE|L1 566632 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 248158-2 chrX 58304874 58305984 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -394796 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 302796 chr10 78425100 78426395 + 527.06 NA Intergenic L1M5|LINE|L1 158405 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 179552 chr11 66450846 66451691 + 527.06 NA Intergenic L2a|LINE|L2 -12420 NR_120589 65003 Hs.418450 NM_016050 ENSG00000174547 MRPL11 CGI-113|L11MT|MRP-L11 mitochondrial ribosomal protein L11 protein-coding 327919 chr8 46049280 46050297 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 567855 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 181572-4 chr20 42219691 42220467 + 527.06 NA intron (NM_133170, intron 16 of 31) L1MC|LINE|L1 -465404 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 263881-2 chr2 212783722 212784858 + 527.06 NA Intergenic L1M3|LINE|L1 -11041 NR_131941 102725079 Hs.176124 NR_131941 ENSG00000234308 LINC01878 - long intergenic non-protein coding RNA 1878 ncRNA 217500-2 chr19 37682306 37683173 + 527.06 NA intron (NM_152605, intron 3 of 3) AluJb|SINE|Alu 9576 NM_152605 163115 Hs.722657 NM_152605 ENSG00000196381 ZNF781 - zinc finger protein 781 protein-coding 234542-2 chr14 51493903 51494888 + 527.06 NA intron (NM_001042481, intron 1 of 14) MLT-int|LTR|ERVL-MaLR 5267 NM_001042481 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding 457752 chr4 113419991 113422374 + 527.06 NA Intergenic L1MEc|LINE|L1 128343 NM_001354281 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding 204851 chr1 247252423 247253282 + 527.06 NA Intergenic Intergenic -3220 NM_173858 317705 Hs.553686 NM_173858 ENSG00000197617 VN1R5 V1RL5 vomeronasal 1 receptor 5 (gene/pseudogene) protein-coding 184559-5 chr21 24032821 24033695 + 527.06 NA Intergenic L1MEf|LINE|L1 288119 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA 660494 chr14 70491543 70494515 + 527.06 NA Intergenic L1MA1|LINE|L1 -9273 NR_037933 317760 Hs.188369 NR_037933 ENSG00000259158 ADAM20P1 C14orf55 ADAM metallopeptidase domain 20 pseudogene 1 pseudo 278200 chr19 31863415 31864345 + 527.06 NA Intergenic L1MA8|LINE|L1 -161982 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA 425425 chr7 36939760 36941506 + 527.06 NA intron (NM_001206480, intron 16 of 21) MIRb|SINE|MIR -21201 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA 226899-2 chr10 111333202 111334288 + 527.06 NA Intergenic Intergenic 219454 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 239637-3 chr17 68609074 68610135 + 527.06 NA Intergenic L1ME1|LINE|L1 -8237 NM_017565 54757 Hs.268874 NM_017565 ENSG00000108950 FAM20A AI1G|AIGFS|FP2747 FAM20A golgi associated secretory pathway pseudokinase protein-coding 238758-3 chr19 36454016 36454949 + 527.06 NA intron (NM_001145345, intron 4 of 4) AluJo|SINE|Alu 33308 NR_033748 644189 Hs.608412 NR_033748 LOC644189 - acyl-CoA thioesterase 4 pseudogene pseudo 229623-2 chr3 44738481 44739421 + 527.06 NA Intergenic AluYc|SINE|Alu 9316 NM_001258280 115560 Hs.401045 NM_145044 ENSG00000186446 ZNF501 ZNF|ZNF52 zinc finger protein 501 protein-coding 236826-5 chr8 139506630 139507485 + 527.06 NA Intergenic Intergenic 196066 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 182978-2 chr16 54786947 54787793 + 527.06 NA Intergenic HAL1M8|LINE|L1 60863 NR_134971 101927480 Hs.499208 NR_134971 ENSG00000245694 LOC101927480 - uncharacterized LOC101927480 ncRNA 279166 chr19 51915186 51916388 + 527.06 NA Intergenic Intergenic -10770 NM_023074 65251 Hs.148322 NM_023074 ENSG00000198093 ZNF649 - zinc finger protein 649 protein-coding 201776 chr22 27702904 27703675 + 527.06 NA Intergenic MER113|DNA|hAT-Charlie 98467 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding 282856 chr3 193755443 193756725 + 527.06 NA Intergenic L1MEf|LINE|L1 87925 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA 289444 chr11 54775009 54776261 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 68803 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 194222-4 chr4 34162391 34163066 + 527.06 NA intron (NR_147184, intron 2 of 3) L1MA2|LINE|L1 107019 NR_147184 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 337933 chr2 79552543 79554177 + 527.06 NA intron (NM_001282598, intron 1 of 17) MSTA-int|LTR|ERVL-MaLR 30177 NM_001282598 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 186931 chr1 152106453 152107364 + 527.06 NA 3' UTR (NM_007113, exon 3 of 3) 3' UTR (NM_007113, exon 3 of 3) 8546 NM_007113 7062 Hs.432416 NM_007113 ENSG00000159450 TCHH THH|THL|TRHY|UHS3 trichohyalin protein-coding 214601 chr10 41881601 41882504 + 527.06 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 485993 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 200634-5 chr4 91835270 91836165 + 527.06 NA Intergenic L1MC|LINE|L1 441585 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 223034-7 chr9 27657272 27657982 + 527.06 NA Intergenic Intergenic -83761 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 335035-2 chr8 46500104 46501605 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 116789 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 373773 chr14 53986241 53987568 + 527.06 NA Intergenic THE1B|LTR|ERVL-MaLR -30013 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding 197472-5 chr7 131254917 131255433 + 527.06 NA intron (NM_001145354, intron 2 of 18) AluJr|SINE|Alu 72604 NR_125364 100506881 Hs.660830 NR_125364 ENSG00000236753 MKLN1-AS MKLN1-AS2 MKLN1 antisense RNA ncRNA 289532-2 chr6 145444192 145445461 + 527.06 NA Intergenic L1M4|LINE|L1 242051 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding 256766-3 chr15 53369060 53370528 + 527.06 NA Intergenic L1MEg|LINE|L1 171058 NR_102336 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding 553413 chrUn_KI270465v1 53 1774 + 527.06 NA NA ALR/Alpha|Satellite|centr NA NA 195979-6 chr7 45309627 45310339 + 527.06 NA Intergenic L1M2|LINE|L1 152192 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding 223298 chr10 21827886 21828904 + 527.06 NA intron (NM_022365, intron 8 of 11) intron (NM_022365, intron 8 of 11) 175335 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding 210121-2 chr4 35745256 35745975 + 527.06 NA Intergenic L1PA13|LINE|L1 498324 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 545419 chr3 8344147 8345837 + 527.06 NA intron (NR_033378, intron 3 of 3) L1ME1|LINE|L1 156666 NR_033378 100288428 Hs.651576 NR_033378 ENSG00000227110 LMCD1-AS1 - LMCD1 antisense RNA 1 ncRNA 511161 chr2 75512518 75514577 + 527.06 NA intron (NM_032181, intron 3 of 3) L1MA9|LINE|L1 -10521 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA 177356-4 chr5 6239310 6240178 + 527.06 NA Intergenic L1M5|LINE|L1 97548 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 257996 chr14 67082103 67083133 + 527.06 NA intron (NM_001024218, intron 10 of 21) L1ME4c|LINE|L1 -106822 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 189302 chr12 3527240 3527906 + 527.06 NA intron (NM_019854, intron 1 of 9) L1MB3|LINE|L1 -34754 NR_126055 100129223 Hs.586788 NR_126055 THCAT155 - thyroid cancer-associated transcript 155 ncRNA 390464 chr5 45997208 45998961 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -301704 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 191235-3 chr20 59711258 59712031 + 527.06 NA intron (NM_001199506, intron 1 of 12) MER47A|DNA|TcMar-Tigger -9566 NM_183246 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 506681 chr5 45945029 45947500 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -249884 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 252023 chr17 69981800 69982628 + 527.06 NA intron (NR_110875, intron 3 of 4) intron (NR_110875, intron 3 of 4) 20507 NR_110874 102723487 Hs.451409 NR_110874 ENSG00000237560 LINC01497 - long intergenic non-protein coding RNA 1497 ncRNA 209682-4 chr17 33592805 33593857 + 527.06 NA intron (NM_001094, intron 1 of 9) MIR3|SINE|MIR -59571 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo 281187-2 chr21 29200164 29201093 + 527.06 NA intron (NR_027072, intron 1 of 1) L1M4|LINE|L1 7134 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA 215041-3 chr2 138952946 138953826 + 527.06 NA Intergenic Intergenic 56062 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 220487-4 chr3 44720237 44721198 + 527.06 NA intron (NM_033210, intron 3 of 3) intron (NM_033210, intron 3 of 3) 8057 NM_001134442 91392 Hs.224843 NM_033210 ENSG00000196653 ZNF502 - zinc finger protein 502 protein-coding 277234 chr2 105728473 105729732 + 527.06 NA Intergenic Intergenic -15810 NM_003581 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding 192992-2 chr3 137422469 137423173 + 527.06 NA Intergenic L1M2|LINE|L1 -341494 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding 256151 chr5 41393823 41394921 + 527.06 NA intron (NM_001005473, intron 1 of 2) L1MA1|LINE|L1 116229 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding 185086-5 chr4 75118894 75119749 + 527.06 NA Intergenic L1MA5|LINE|L1 -34613 NR_149051 105377283 Hs.103159 NR_149051 LINC02562 - long intergenic non-protein coding RNA 2562 ncRNA 205729-5 chr7 54420488 54421298 + 527.06 NA Intergenic AluSx3|SINE|Alu 90196 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 273281 chr14 88952934 88953755 + 527.06 NA Intergenic Intergenic 128693 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 182539-2 chr10 18959151 18959812 + 527.06 NA Intergenic Intergenic -89320 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding 201337-3 chr7 54504926 54505853 + 527.06 NA Intergenic L1M4a2|LINE|L1 -36936 NM_182546 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding 287511-2 chr7 34538700 34540007 + 527.06 NA intron (NR_033665, intron 2 of 3) L1MEc|LINE|L1 -118865 NM_207173 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 308506-2 chr17 65644169 65645415 + 527.06 NA intron (NM_001353129, intron 24 of 26) AluJo|SINE|Alu -83144 NM_001363813 8313 Hs.156527 NM_004655 ENSG00000168646 AXIN2 AXIL|ODCRCS axin 2 protein-coding 189039-7 chr7 61957121 61957887 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 1346552 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 378781 chr2 160021999 160023526 + 527.06 NA exon (NM_001195641, exon 7 of 30) exon (NM_001195641, exon 7 of 30) 39853 NM_007366 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding 222595-3 chr8 91686224 91686854 + 527.06 NA Intergenic L1MA9|LINE|L1 331141 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 210385-3 chr19 32147796 32148629 + 527.06 NA Intergenic L1MDa|LINE|L1 -42296 NR_110694 101927411 Hs.515337 NR_110694 ENSG00000267204 LINC01782 - long intergenic non-protein coding RNA 1782 ncRNA 190357-7 chr7 129586796 129587452 + 527.06 NA Intergenic Intergenic -24596 NM_001293164 4899 Hs.654363 NM_005011 ENSG00000106459 NRF1 ALPHA-PAL nuclear respiratory factor 1 protein-coding 235508-5 chr7 52516715 52517667 + 527.06 NA Intergenic L1PB1|LINE|L1 -518442 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 178849-5 chr19 28340557 28341344 + 527.06 NA Intergenic MIRb|SINE|MIR -265738 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA 295154 chr15 92331691 92333109 + 527.06 NA Intergenic L1ME5|LINE|L1 -61481 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding 310614 chr2 103941730 103942917 + 527.06 NA Intergenic L1MDa|LINE|L1 466009 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 327831 chr17 31663634 31664973 + 527.06 NA Intergenic AluY|SINE|Alu 88892 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA 208628-2 chr12 38040182 38041151 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -276108 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 184208-4 chr8 123586763 123587543 + 527.06 NA Intergenic MLT1O|LTR|ERVL-MaLR -45947 NM_001242463 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding 201161 chr18 5924587 5925346 + 527.06 NA Intergenic MIRc|SINE|MIR -29012 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding 444839 chr2 39361427 39363531 + 527.06 NA intron (NM_003618, intron 2 of 33) L1MB1|LINE|L1 74806 NM_001270425 8491 Hs.655750 NM_003618 ENSG00000011566 MAP4K3 GLK|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1 mitogen-activated protein kinase kinase kinase kinase 3 protein-coding 212932 chr14 83843057 83843733 + 527.06 NA Intergenic MIRb|SINE|MIR 1200763 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 196594 chr6 155927161 155927952 + 527.06 NA Intergenic L1MB8|LINE|L1 -19241 NR_031606 100302259 NR_031606 ENSG00000221456 MIR1202 MIRN1202|hsa-mir-1202 microRNA 1202 ncRNA 350495 chr5 46208997 46210383 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -513310 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 182275-5 chr19 12075393 12076280 + 527.06 NA exon (NM_001136501, exon 4 of 4) exon (NM_001136501, exon 4 of 4) 11105 NM_001136501 284391 Hs.646391 NM_001136501 ENSG00000223547 ZNF844 - zinc finger protein 844 protein-coding 272578-3 chr8 128414740 128416123 + 527.06 NA intron (NR_121672, intron 5 of 7) L2a|LINE|L2 149248 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA 486476 chr17 65909643 65912102 + 527.06 NA intron (NM_001353129, intron 19 of 26) HAL1b|LINE|L1 -84329 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 238319 chr16 60517009 60517854 + 527.06 NA Intergenic L1MA4A|LINE|L1 -157638 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding 192465-10 chr8 138209713 138210488 + 527.06 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) -126555 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 177619-5 chr21 28377732 28378409 + 527.06 NA Intergenic MIRb|SINE|MIR -149403 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 245347-2 chr5 170825624 170827071 + 527.06 NA Intergenic LTR19A|LTR|ERV1 -35671 NM_022897 64901 Hs.410810 NM_022897 ENSG00000204764 RANBP17 - RAN binding protein 17 protein-coding 183768-5 chr3 82624212 82625380 + 527.06 NA Intergenic L1MC5a|LINE|L1 638654 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA 179464-4 chr3 35103213 35103840 + 527.06 NA intron (NR_110817, intron 2 of 3) L1M5|LINE|L1 290497 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 430169 chr10 49086346 49088218 + 527.06 NA intron (NM_001031746, intron 2 of 7) L1MEg|LINE|L1 28240 NM_144984 196740 Hs.522928 NM_144984 ENSG00000165633 VSTM4 C10orf72 V-set and transmembrane domain containing 4 protein-coding 296911 chr3 83587920 83589221 + 527.06 NA Intergenic L1MA5A|LINE|L1 1281005 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 179991-7 chr8 139581151 139581782 + 527.06 NA Intergenic Intergenic 121657 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 203445 chr12 6173826 6174519 + 527.06 NA Intergenic Intergenic -25774 NM_001330312 928 Hs.114286 NM_001769 ENSG00000010278 CD9 BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 CD9 molecule protein-coding 209331 chr15 86473116 86474021 + 527.06 NA intron (NM_152336, intron 18 of 24) L1ME4a|LINE|L1 -156600 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA 182451-6 chr8 86241557 86242441 + 527.06 NA Intergenic L1MC2|LINE|L1 -11618 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 249739-2 chr4 63985370 63986324 + 527.06 NA Intergenic Intergenic 423603 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 179464-7 chr4 104999101 104999623 + 527.06 NA Intergenic MIRb|SINE|MIR -146513 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 380450 chr7 62864871 62866508 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 438367 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 245522-2 chr2 107482908 107483847 + 527.06 NA Intergenic (TATATATG)n|Simple_repeat|Simple_repeat -46042 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA 264936 chr5 41228228 41229395 + 527.06 NA intron (NM_001115131, intron 1 of 17) L1MA8|LINE|L1 -15279 NM_000065 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding 196242-5 chr8 141745603 141746627 + 527.06 NA Intergenic AluJo|SINE|Alu 40198 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 721721 chr6 56171412 56174378 + 527.06 NA intron (NM_030820, intron 3 of 29) L1MB1|LINE|L1 74685 NR_134851 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 188073-4 chr3 156872247 156873211 + 527.06 NA intron (NM_001004316, intron 3 of 12) L1MA4A|LINE|L1 46376 NM_001193283 389170 Hs.478048 NM_001004316 ENSG00000197980 LEKR1 - leucine, glutamate and lysine rich 1 protein-coding 261598-2 chr12 118703560 118704549 + 527.06 NA Intergenic Intergenic 57625 NR_134999 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA 193607-5 chr12 59154745 59155582 + 527.06 NA Intergenic Intergenic -234625 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding 286633 chr15 87105590 87106604 + 527.06 NA Intergenic L1MA4A|LINE|L1 -117671 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA 205466-2 chr19 52071060 52071982 + 527.06 NA intron (NM_001369830, intron 2 of 2) L1M4c|LINE|L1 -22683 NM_014650 9668 Hs.655934 NM_014650 ENSG00000256087 ZNF432 - zinc finger protein 432 protein-coding 189039-9 chr8 139991428 139992162 + 527.06 NA intron (NM_001160372, intron 18 of 22) intron (NM_001160372, intron 18 of 22) 108740 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 193695-6 chr12 3591446 3592402 + 527.06 NA intron (NM_019854, intron 8 of 9) intron (NM_019854, intron 8 of 9) -99105 NR_126055 100129223 Hs.586788 NR_126055 THCAT155 - thyroid cancer-associated transcript 155 ncRNA 524864 chr5 46299899 46301840 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -604489 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 232697-2 chr19 352680 353660 + 527.06 NA Intergenic Intergenic -8329 NM_001346105 54531 Hs.101891 NM_017550 ENSG00000105556 MIER2 KIAA1193|Mi-er2 MIER family member 2 protein-coding 350846-2 chr2 30065686 30067236 + 527.06 NA Intergenic L1MA2|LINE|L1 -80546 NM_001127400 51646 Hs.515890 NM_016061 ENSG00000119801 YPEL5 CGI-127 yippee like 5 protein-coding 201073 chr14 72107651 72108348 + 527.06 NA intron (NM_001370288, intron 2 of 16) HAL1M8|LINE|L1 174472 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 550690 chr9 27233668 27236116 + 527.06 NA Intergenic L1MA8|LINE|L1 47901 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA 204587-2 chr12 21943286 21944099 + 527.06 NA Intergenic L2a|LINE|L2 -6998 NM_020297 10060 Hs.732701 NM_005691 ENSG00000069431 ABCC9 ABC37|ATFB12|CANTU|CMD1O|SUR2 ATP binding cassette subfamily C member 9 protein-coding 254746-3 chr4 94426617 94427709 + 527.06 NA Intergenic FLAM_A|SINE|Alu -24694 NM_001256425 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding 347772 chr5 2975198 2977103 + 527.06 NA Intergenic L1M5|LINE|L1 58296 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA 197472-4 chr17 65338975 65339976 + 527.06 NA Intergenic MIR|SINE|MIR -118066 NR_131984 105827617 NR_131984 ENSG00000263520 LINC02563 CRAT40 long intergenic non-protein coding RNA 2563 ncRNA 238056-4 chr4 45740148 45741291 + 527.06 NA Intergenic L1PREC2|LINE|L1 383335 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding 234366-2 chr4 69472491 69473560 + 527.06 NA Intergenic L1M4|LINE|L1 22880 NM_001297615 7363 Hs.285887 NM_021139 ENSG00000156096 UGT2B4 HLUG25|UDPGT2B4|UDPGTH1|UDPGTh-1|UGT2B11 UDP glucuronosyltransferase family 2 member B4 protein-coding 267483-3 chr9 80711015 80711818 + 527.06 NA Intergenic L1M5|LINE|L1 736393 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA 255097-3 chr2 127600739 127601681 + 527.06 NA intron (NM_001080527, intron 19 of 46) L1MD1|LINE|L1 -30248 NR_132317 105373609 Hs.677195 NR_132317 LOC105373609 - uncharacterized LOC105373609 ncRNA 208892 chr7 78001046 78002119 + 527.06 NA Intergenic Intergenic 161452 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding 195012-2 chr1 125179723 125180279 + 527.06 NA Intergenic Intergenic 3660889 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo 211176 chr11 10871659 10872551 + 527.06 NA intron (NR_034137, intron 2 of 2) L1M2|LINE|L1 13888 NR_034137 729013 Hs.726427 NR_034137 ENSG00000247271 ZBED5-AS1 - ZBED5 antisense RNA 1 ncRNA 201688-8 chr8 108312069 108312877 + 527.06 NA Intergenic L1MA3|LINE|L1 -63756 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding 263354-2 chr2 86269119 86270117 + 527.06 NA intron (NM_001164731, intron 1 of 5) MER4D1|LTR|ERV1 68008 NM_022912 65055 Hs.368884 NM_022912 ENSG00000068615 REEP1 C2orf23|HMN5B|SPG31|Yip2a receptor accessory protein 1 protein-coding 193080-4 chr6 119270974 119271968 + 527.06 NA intron (NM_005907, intron 5 of 12) intron (NM_005907, intron 5 of 12) 78290 NM_005907 4121 Hs.102788 NM_005907 ENSG00000111885 MAN1A1 HUMM3|HUMM9|MAN9 mannosidase alpha class 1A member 1 protein-coding 192026-3 chr14 81899715 81900374 + 527.06 NA Intergenic L1MA8|LINE|L1 -156906 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 207398-4 chr20 39169510 39170234 + 527.06 NA Intergenic L2a|LINE|L2 54876 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 380801-3 chr5 30945993 30947735 + 527.06 NA Intergenic L2b|LINE|L2 -246822 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 199053-2 chr16 59948849 59949740 + 527.06 NA intron (NR_110917, intron 1 of 3) intron (NR_110917, intron 1 of 3) 93941 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA 369381-2 chr7 5098695 5100055 + 527.06 NA Intergenic L1MA5|LINE|L1 27315 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 182011-4 chr8 46534001 46535099 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 83093 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 182714-2 chr11 50529521 50530383 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 120805 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 291640 chr3 189192373 189193403 + 527.06 NA intron (NM_198485, intron 1 of 5) L1M2a|LINE|L1 20917 NM_198485 285386 Hs.729544 NM_198485 ENSG00000188001 TPRG1 FAM79B tumor protein p63 regulated 1 protein-coding 192289-8 chr5 40240330 40241156 + 527.06 NA Intergenic Intergenic 188452 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 183944-3 chr12 133019023 133019786 + 527.06 NA 3' UTR (NM_001330513, exon 5 of 5) 3' UTR (NM_001330513, exon 5 of 5) 17818 NR_110091 101928597 Hs.638942 NR_110091 ENSG00000246394 ZNF84-DT - ZNF84 divergent transcript ncRNA 197648-8 chr5 45749080 45750010 + 527.06 NA Intergenic Intergenic -53165 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 243590 chr14 54033515 54034651 + 527.06 NA Intergenic L1MCc|LINE|L1 -77192 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding 271612 chr19 28993504 28994429 + 527.06 NA Intergenic LTR8A|LTR|ERV1 -8589 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LINC01532 - long intergenic non-protein coding RNA 1532 ncRNA 251847-2 chr3 6594717 6595692 + 527.06 NA Intergenic L1MA7|LINE|L1 210245 NR_110125 101927347 Hs.333345 NR_110123 ENSG00000226258 GRM7-AS3 - GRM7 antisense RNA 3 ncRNA 203094-3 chr4 62608809 62609598 + 527.06 NA Intergenic L1M4b|LINE|L1 -447438 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 188424-8 chr5 144445003 144446141 + 527.06 NA intron (NM_001370487, intron 2 of 2) HAL1M8|LINE|L1 240181 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding 285315-5 chr9 27788602 27789817 + 527.06 NA Intergenic MSTA-int|LTR|ERVL-MaLR -215343 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 186667-4 chr4 111101958 111102745 + 527.06 NA Intergenic Intergenic -241704 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA 226285-2 chr8 34213515 34214382 + 527.06 NA Intergenic MIRb|SINE|MIR -569973 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA 227163-4 chr22 24717126 24718048 + 527.06 NA Intergenic Intergenic -46914 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo 294012 chr10 18741684 18742932 + 527.06 NA Intergenic L1MEd|LINE|L1 82877 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding 227778 chr8 126340377 126341469 + 527.06 NA Intergenic L1PB2|LINE|L1 15428 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 295417 chr16 80864116 80865400 + 527.06 NA intron (NR_131948, intron 1 of 2) L1MD2|LINE|L1 27838 NR_131948 100996425 Hs.125350 NR_131947 ENSG00000260896 ARLNC1 LINC02170|PRCAT47 androgen receptor regulated long noncoding RNA 1 ncRNA 224967 chr1 227641232 227642188 + 527.06 NA intron (NR_102302, intron 2 of 5) LTR70|LTR|ERV1 55997 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 255536 chr7 24504904 24505880 + 527.06 NA Intergenic Intergenic -68060 NM_001303037 51678 Hs.533355 NM_016447 ENSG00000105926 MPP6 PALS2|VAM-1|VAM1|p55T membrane palmitoylated protein 6 protein-coding 367361 chr2 84660637 84662184 + 527.06 NA intron (NM_001370, intron 37 of 76) L1M4|LINE|L1 144955 NM_001370 1768 Hs.249972 NM_001370 ENSG00000115423 DNAH6 DNHL1|Dnahc6|HL-2|HL2 dynein axonemal heavy chain 6 protein-coding 197384 chr14 68064232 68064913 + 527.06 NA intron (NM_133509, intron 7 of 10) L1M2|LINE|L1 240980 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 216358 chr1 181282127 181283104 + 527.06 NA Intergenic L1ME1|LINE|L1 46227 NR_046249 100287948 Hs.742594 NR_046249 ENSG00000179452 LINC01699 GM140 long intergenic non-protein coding RNA 1699 ncRNA 181221-4 chr19 37000280 37001285 + 527.06 NA Intergenic Intergenic -77440 NM_001329520 147923 Hs.444992 NM_144689 ENSG00000197050 ZNF420 APAK zinc finger protein 420 protein-coding 269064-2 chr5 46222664 46223588 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -526746 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 445366 chr7 27619158 27620974 + 527.06 NA intron (NR_122122, intron 2 of 2) AluJo|SINE|Alu 4092 NR_122122 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA 460299 chr15 88352924 88354760 + 527.06 NA Intergenic MLT1E1A|LTR|ERVL-MaLR -97103 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding 489727 chr20 48008298 48010487 + 527.06 NA Intergenic Intergenic -19275 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA 296384 chr10 98595787 98596777 + 527.06 NA intron (NM_021828, intron 9 of 11) L1MA8|LINE|L1 -149319 NM_001322476 3257 Hs.404568 NM_000195 ENSG00000107521 HPS1 BLOC3S1|HPS HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 protein-coding 195100-6 chr8 87567274 87568147 + 527.06 NA Intergenic Intergenic 306305 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 238758-2 chr15 25045411 25046177 + 527.06 NA intron (NR_146177, intron 23 of 147) L1MB7|LINE|L1 3820 NR_001295 338428 NR_001295 ENSG00000274640 SNORD109A HBII-438A small nucleolar RNA, C/D box 109A snoRNA 276619-2 chr15 87281956 87283259 + 527.06 NA Intergenic L1MB3|LINE|L1 -294181 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA 376936 chr1 40473497 40474827 + 527.06 NA Intergenic L1ME3A|LINE|L1 -3128 NM_198494 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding 280308 chr10 78270624 78272252 + 527.06 NA intron (NR_073447, intron 1 of 2) AluSz|SINE|Alu 4096 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 179200 chr10 33822168 33822895 + 527.06 NA Intergenic Intergenic -49851 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 194573 chr11 55032292 55032992 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -229513 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 197911-4 chr15 70622166 70622838 + 527.06 NA Intergenic L1MEg|LINE|L1 6955 NR_126481 104548972 NR_126481 ENSG00000281264 SALRNA3 SAL-RNA3|XLOC_025918 senescence associated long non-coding RNA 3 ncRNA 309297-2 chr8 139183031 139184404 + 527.06 NA Intergenic L1MA5A|LINE|L1 -269676 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 181221-8 chr4 56737432 56738319 + 527.06 NA Intergenic Intergenic -56169 NM_001145460 84525 Hs.619396 NM_032495 ENSG00000171476 HOPX CAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO HOP homeobox protein-coding 365692 chr2 190016965 190018779 + 527.06 NA Intergenic L1MA7|LINE|L1 44857 NM_005259 2660 Hs.41565 NM_005259 ENSG00000138379 MSTN GDF8|MSLHP myostatin protein-coding 205553-3 chr2 171245747 171246495 + 527.06 NA Intergenic MER21C|LTR|ERVL -14828 NM_001136554 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding 385281-2 chr7 1793421 1794734 + 527.06 NA Intergenic L1ME3A|LINE|L1 50176 NR_039799 100616160 NR_039799 ENSG00000265089 MIR4655 - microRNA 4655 ncRNA 202742-2 chr19 52333721 52334389 + 527.06 NA Intergenic L1MC3|LINE|L1 -2188 NM_001161425 162963 Hs.147025 NM_173530 ENSG00000167554 ZNF610 - zinc finger protein 610 protein-coding 302533 chr11 100364323 100365687 + 527.06 NA Intergenic L1PA16|LINE|L1 -322283 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding 190796 chr1 40467312 40467953 + 527.06 NA Intergenic HAL1|LINE|L1 -9658 NM_198494 339559 Hs.434385 NM_198494 ENSG00000187815 ZFP69 ZFP69A|ZKSCAN23A|ZNF642|ZSCAN54A ZFP69 zinc finger protein protein-coding 195979-3 chr14 48471814 48472402 + 527.06 NA Intergenic L1MEd|LINE|L1 -677094 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 254570-2 chr14 89118402 89119761 + 527.06 NA Intergenic THE1C|LTR|ERVL-MaLR 294430 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 242360-2 chr19 24332373 24333414 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -169446 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 267571 chr12 79755792 79757017 + 527.06 NA Intergenic L1MCc|LINE|L1 -65307 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding 194661 chr1 42027018 42027918 + 527.06 NA intron (NR_038261, intron 1 of 3) L2a|LINE|L2 8466 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 445278 chr8 139686767 139688492 + 527.06 NA intron (NR_104210, intron 1 of 3) intron (NR_104210, intron 1 of 3) 15494 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 219960-2 chr2 191481520 191482235 + 527.06 NA Intergenic L1M4b|LINE|L1 -196195 NM_001254736 64859 Hs.591610 NM_022837 ENSG00000173559 NABP1 OBFC2A|SOSS-B2|SSB2 nucleic acid binding protein 1 protein-coding 274423-5 chr5 25661272 25662703 + 527.06 NA Intergenic Intergenic 471034 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 221190-3 chr7 57145463 57146549 + 527.06 NA Intergenic L1M4c|LINE|L1 -6142 NM_033273 90827 Hs.616660 NM_033273 ENSG00000185177 ZNF479 HKr19|KR19 zinc finger protein 479 protein-coding 229359 chr9 23944235 23944987 + 527.06 NA Intergenic MER61-int|LTR|ERV1 -94010 NM_001351466 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding 190269-2 chr14 42573075 42573634 + 527.06 NA Intergenic L1MA3|LINE|L1 966498 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 222068-5 chr8 10092703 10093546 + 527.06 NA intron (NM_001135670, intron 1 of 4) L1MB7|LINE|L1 -2527 NM_001135671 4482 Hs.490981 NM_012331 ENSG00000175806 MSRA PMSR methionine sulfoxide reductase A protein-coding 262300-2 chr4 373447 374454 + 527.06 NA 3' UTR (NM_001348277, exon 2 of 2) 3' UTR (NM_001348277, exon 2 of 2) 23793 NR_030297 693156 NR_030297 ENSG00000207642 MIR571 MIRN571|hsa-mir-571 microRNA 571 ncRNA 245083-2 chr8 134446105 134447020 + 527.06 NA Intergenic AluJr4|SINE|Alu -151509 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 374301-2 chr3 123841104 123842675 + 527.06 NA intron (NM_001321309, intron 2 of 32) intron (NM_001321309, intron 2 of 32) 42443 NM_001321309 4638 Hs.477375 NM_005965 ENSG00000065534 MYLK AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK myosin light chain kinase protein-coding 203182 chr1 238517355 238518015 + 527.06 NA Intergenic Intergenic -31668 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 179288 chr1 214760399 214761186 + 527.06 NA Intergenic L1PA13|LINE|L1 157597 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding 392133 chr5 68576951 68578715 + 527.06 NA Intergenic L1M7|LINE|L1 285256 NM_001242466 5295 Hs.132225 NM_181504 ENSG00000145675 PIK3R1 AGM7|GRB1|IMD36|p85|p85-ALPHA phosphoinositide-3-kinase regulatory subunit 1 protein-coding 201513-2 chr5 129669240 129669913 + 527.06 NA intron (NM_133638, intron 16 of 22) L1M3|LINE|L1 -78518 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding 260192-2 chr2 211107773 211108624 + 527.06 NA Intergenic MLT1F2|LTR|ERVL-MaLR 490627 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA 289532-3 chr7 40505964 40507052 + 527.06 NA intron (NM_001193312, intron 11 of 12) L1M4b|LINE|L1 371532 NM_001193311 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding 200986-6 chr7 46469837 46470717 + 527.06 NA Intergenic HUERS-P3-int|LTR|ERV1 226845 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 211527-4 chr3 19751073 19751940 + 527.06 NA Intergenic L1MEc|LINE|L1 182711 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding 444400 chr19 44480010 44481653 + 527.06 NA intron (NM_001278508, intron 2 of 3) Tigger4b|DNA|TcMar-Tigger 19691 NM_001278508 7733 Hs.22305 NM_013256 ENSG00000167384 ZNF180 HHZ168 zinc finger protein 180 protein-coding 272929 chr14 62401219 62402444 + 527.06 NA Intergenic Intergenic -261858 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 187809-5 chr16 47833707 47834445 + 527.06 NA Intergenic L1M4c|LINE|L1 -24505 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA 203357-3 chr4 122488165 122489033 + 527.06 NA Intergenic AluJo|SINE|Alu -32104 NM_000586 3558 Hs.89679 NM_000586 ENSG00000109471 IL2 IL-2|TCGF|lymphokine interleukin 2 protein-coding 197911-6 chr5 32776015 32777261 + 527.06 NA intron (NM_001364460, intron 3 of 6) intron (NM_001364460, intron 3 of 6) 65317 NM_001204375 4883 Hs.13528 NM_000908 ENSG00000113389 NPR3 ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC natriuretic peptide receptor 3 protein-coding 202655 chr1 179405684 179406478 + 527.06 NA intron (NR_073544, intron 11 of 25) L1M2|LINE|L1 40037 NR_073544 126859 Hs.658505 NM_144696 ENSG00000162779 AXDND1 C1orf125 axonemal dynein light chain domain containing 1 protein-coding 222859-5 chr8 128384095 128384896 + 527.06 NA Intergenic Intergenic 180184 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA 247191-2 chr3 114268647 114269585 + 527.06 NA Intergenic L1PB1|LINE|L1 -24912 NM_173799 201633 Hs.421750 NM_173799 ENSG00000181847 TIGIT VSIG9|VSTM3|WUCAM T cell immunoreceptor with Ig and ITIM domains protein-coding 250969-3 chr19 53236306 53237444 + 527.06 NA 3' UTR (NM_182609, exon 5 of 5) 3' UTR (NM_182609, exon 5 of 5) 17975 NM_001317998 342926 Hs.20506 NM_182609 ENSG00000197928 ZNF677 - zinc finger protein 677 protein-coding 334683 chr11 14345142 14346706 + 527.06 NA intron (NM_001177314, intron 1 of 5) intron (NM_001177314, intron 1 of 5) 12561 NM_001177315 22800 Hs.502004 NM_012250 ENSG00000133818 RRAS2 TC21 RAS related 2 protein-coding 236123-3 chr7 64976754 64977507 + 527.06 NA 3' UTR (NM_015852, exon 4 of 4) 3' UTR (NM_015852, exon 4 of 4) 13906 NM_015852 51351 Hs.250693 NM_015852 ENSG00000152926 ZNF117 H-plk|HPF9 zinc finger protein 117 protein-coding 227075-3 chr2 100533318 100534424 + 527.06 NA Intergenic MLT1H|LTR|ERVL-MaLR -29122 NM_024065 79031 Hs.469459 NM_024065 ENSG00000115539 PDCL3 HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1 phosducin like 3 protein-coding 382733 chr3 105304964 105306397 + 527.06 NA Intergenic L1PA7|LINE|L1 -61033 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 208189-2 chr2 121802043 121803212 + 527.06 NA Intergenic L1MDa|LINE|L1 46976 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding 185350 chr4 37199349 37200312 + 527.06 NA Intergenic L1PA15|LINE|L1 42161 NR_039965 100616435 NR_039965 ENSG00000264319 MIR4801 - microRNA 4801 ncRNA 273105 chr6 141041977 141043181 + 527.06 NA Intergenic L1MC4|LINE|L1 358765 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA 282329-3 chr2 63104512 63105638 + 527.06 NA Intergenic L1MA4A|LINE|L1 14467 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 407593-2 chr7 62401824 62403375 + 527.06 NA Intergenic Intergenic 901457 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 271787-2 chr5 62965102 62966298 + 527.06 NA Intergenic Intergenic 386881 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 199668-2 chr22 44475785 44476696 + 527.06 NA Intergenic L1MDa|LINE|L1 21993 NM_032287 84247 Hs.744991 NM_032287 ENSG00000188636 RTL6 LDOC1L|Mar6|Mart6|SIRH3|dJ1033E15.2 retrotransposon Gag like 6 protein-coding 267747 chr10 39139787 39140843 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 443719 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 256063 chr1 221222581 221223566 + 527.06 NA Intergenic L1MEf|LINE|L1 113223 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA 297174 chr19 29179586 29180745 + 527.06 NA Intergenic L1MA2|LINE|L1 32986 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 244820 chr1 230034979 230036014 + 527.06 NA Intergenic L1M4|LINE|L1 -22293 NM_001291866 2590 Hs.743964 NM_004481 ENSG00000143641 GALNT2 GalNAc-T2 polypeptide N-acetylgalactosaminyltransferase 2 protein-coding 324757 chr3 193416129 193417498 + 527.06 NA intron (NM_032279, intron 25 of 29) L1M4|LINE|L1 -38060 NM_198505 344905 Hs.658032 NM_198505 ENSG00000187527 ATP13A5 - ATPase 13A5 protein-coding 212669-4 chr8 27216561 27217344 + 527.06 NA Intergenic L1MEc|LINE|L1 41452 NM_030795 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding 309296 chr7 41596875 41598069 + 527.06 NA Intergenic L1M4b|LINE|L1 -96447 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA 208189-4 chr6 27349815 27350638 + 527.06 NA Intergenic L1MA4|LINE|L1 21299 NR_002722 7754 Hs.8198 NR_002722 ZNF204P ZNF184-Lp|ZNF204|ZNF315P|b24o18.1 zinc finger protein 204, pseudogene pseudo 207837-3 chr10 81178752 81179556 + 527.06 NA Intergenic L1MEg|LINE|L1 529357 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 204324-2 chr12 94194342 94195064 + 527.06 NA intron (NM_005761, intron 4 of 30) AluJb|SINE|Alu 46126 NM_005761 10154 Hs.584845 NM_005761 ENSG00000136040 PLXNC1 CD232|PLXN-C1|VESPR plexin C1 protein-coding 207486 chr18 1442118 1442792 + 527.06 NA Intergenic Intergenic -82826 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 460651 chr19 24362913 24364339 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -200179 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 197999 chr11 81991485 81992298 + 527.06 NA intron (NR_120571, intron 6 of 7) L1MC4|LINE|L1 -101055 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 279342-2 chr2 89797627 89798627 + 527.06 NA Intergenic Intergenic -160220 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 300776 chr14 53905708 53906791 + 527.06 NA Intergenic Intergenic 42235 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA 387214 chr8 126600193 126601724 + 527.06 NA Intergenic L1MD2|LINE|L1 -42480 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 252989-2 chr5 16341602 16342576 + 527.06 NA Intergenic MLT1A0|LTR|ERVL-MaLR 99013 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA 621931 chr19 27721943 27724668 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -70126 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 265726 chr1 113527566 113528400 + 527.06 NA intron (NM_001142782, intron 1 of 20) L1MC5a|LINE|L1 137468 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 186931-7 chr8 133705722 133706456 + 527.06 NA Intergenic Intergenic -22023 NR_134463 105375773 Hs.445172 NR_134462 LOC105375773 - uncharacterized LOC105375773 ncRNA 187194-4 chr6 61516514 61517329 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -57209 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 187106 chr10 39308489 39309208 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 612252 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 218554 chr16 13863097 13864024 + 527.06 NA Intergenic MLT1J2|LTR|ERVL-MaLR -56597 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 186579-3 chr4 167813537 167814229 + 527.06 NA Intergenic L1MDa|LINE|L1 -278654 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding 255097-2 chr2 124689374 124690307 + 527.06 NA intron (NM_130773, intron 13 of 23) intron (NM_130773, intron 13 of 23) 664553 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 263003-2 chr19 51913727 51914656 + 527.06 NA Intergenic AluJb|SINE|Alu -9174 NM_023074 65251 Hs.148322 NM_023074 ENSG00000198093 ZNF649 - zinc finger protein 649 protein-coding 230237-2 chr20 54002248 54003020 + 527.06 NA intron (NM_001366297, intron 4 of 8) Charlie7|DNA|hAT-Charlie 56386 NM_001323347 8537 Hs.400556 NM_003657 ENSG00000064787 BCAS1 AIBC1|NABC1 breast carcinoma amplified sequence 1 protein-coding 248685-3 chr22 43639725 43640857 + 527.06 NA intron (NM_198856, intron 15 of 29) L1MEf|LINE|L1 124037 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA 182099-4 chr4 61047412 61048336 + 527.06 NA Intergenic Intergenic -95782 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA 278551-2 chr3 193900611 193901735 + 527.06 NA Intergenic Intergenic -57164 NR_146718 105374285 Hs.552531 NR_146718 LINC02038 - long intergenic non-protein coding RNA 2038 ncRNA 190532-5 chr20 22901546 22902117 + 527.06 NA Intergenic L1PA15|LINE|L1 -133589 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding 253604 chr22 44376710 44377846 + 527.06 NA Intergenic L1MEg|LINE|L1 -64327 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding 291464-3 chr5 37628525 37629856 + 527.06 NA intron (NM_001345998, intron 10 of 17) L1MA5A|LINE|L1 205632 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding 203797-3 chr10 95958264 95959225 + 527.06 NA intron (NM_001349008, intron 11 of 34) L1M4c|LINE|L1 -41347 NM_001159747 387707 Hs.652240 NM_001001732 ENSG00000188649 CC2D2B C10orf130|C10orf131 coiled-coil and C2 domain containing 2B protein-coding 194046-5 chr9 29088521 29089325 + 527.06 NA intron (NM_001354574, intron 1 of 5) intron (NM_001354574, intron 1 of 5) 123376 NM_001354575 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 216095-2 chr10 42318529 42319438 + 527.06 NA Intergenic Intergenic 49062 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 298052-2 chr3 183128526 183129680 + 527.06 NA intron (NM_014398, intron 5 of 5) HAL1b|LINE|L1 -29516 NR_120639 56922 Hs.47649 NM_020166 ENSG00000078070 MCCC1 MCC-B|MCCA methylcrotonoyl-CoA carboxylase 1 protein-coding 308506 chr10 41816195 41817558 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 551169 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 212317-3 chr2 160084619 160085563 + 527.06 NA Intergenic HUERS-P3-int|LTR|ERV1 -22476 NM_001195641 22925 Hs.410477 NM_007366 ENSG00000153246 PLA2R1 CLEC13C|PLA2-R|PLA2G1R|PLA2IR|PLA2R phospholipase A2 receptor 1 protein-coding 341359 chr18 10508582 10509940 + 527.06 NA Intergenic Intergenic -16766 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding 200371-2 chr16 59282367 59283122 + 527.06 NA Intergenic L1MA4A|LINE|L1 472447 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo 201688-4 chr5 121385 122220 + 527.06 NA intron (NM_052909, intron 2 of 19) L1MB3|LINE|L1 29634 NM_052909 153478 Hs.535800 NM_052909 ENSG00000153404 PLEKHG4B - pleckstrin homology and RhoGEF domain containing G4B protein-coding 236562-2 chr19 43849618 43850529 + 527.06 NA 3' UTR (NM_181845, exon 7 of 7) 3' UTR (NM_181845, exon 7 of 7) 22752 NM_001297752 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding 370962 chr20 52504936 52506395 + 527.06 NA Intergenic L1MA3|LINE|L1 -115173 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 228217-2 chr14 66577471 66578229 + 527.06 NA intron (NM_001024218, intron 1 of 21) intron (NM_001024218, intron 1 of 21) 70443 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 260543 chr7 25373619 25374676 + 527.06 NA Intergenic L1MEg|LINE|L1 -145661 NM_022150 64111 Hs.60473 NM_022150 ENSG00000105954 NPVF C7orf9|RFRP neuropeptide VF precursor protein-coding 231467 chr10 62699842 62700734 + 527.06 NA Intergenic L1MEi|LINE|L1 -104432 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding 284525 chr10 80367202 80368305 + 527.06 NA non-coding (NR_070308, exon 6 of 6) non-coding (NR_070308, exon 6 of 6) 10972 NM_032372 84332 Hs.741500 NM_032372 ENSG00000133665 DYDC2 - DPY30 domain containing 2 protein-coding 193958-11 chr8 144933090 144933874 + 527.06 NA intron (NM_006958, intron 2 of 2) intron (NM_006958, intron 2 of 2) 17398 NM_001029976 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding 297526 chr20 52541720 52543224 + 527.06 NA Intergenic Intergenic -78366 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 266868 chr1 247037030 247037959 + 527.06 NA exon (NM_001204220, exon 4 of 4) exon (NM_001204220, exon 4 of 4) -29437 NM_020394 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding 216973 chr1 115620364 115621235 + 527.06 NA Intergenic L1MEc|LINE|L1 -21171 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding 521965 chr12 133200394 133202553 + 527.06 NA intron (NM_152943, intron 6 of 6) HAL1|LINE|L1 19978 NM_001165882 10795 Hs.124047 NM_003415 ENSG00000090612 ZNF268 HZF3 zinc finger protein 268 protein-coding 200019 chr15 88525980 88526836 + 527.06 NA intron (NR_026645, intron 3 of 4) MamSINE1|SINE|tRNA-RTE 19967 NR_135743 55070 Hs.655064 NM_017996 ENSG00000140543 DET1 - DET1 partner of COP1 E3 ubiquitin ligase protein-coding 180518-3 chr12 15695106 15695716 + 527.06 NA intron (NM_004447, intron 1 of 20) MER3|DNA|hAT-Charlie 93977 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding 220663-4 chr8 82279513 82280487 + 527.06 NA Intergenic L1MA1|LINE|L1 -437714 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 280747 chr1 147300955 147302243 + 527.06 NA Intergenic L1MA8|LINE|L1 58457 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding 240603-3 chr8 138452547 138453681 + 527.06 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 44147 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 228744-2 chr3 102321912 102322966 + 527.06 NA Intergenic LTR41B|LTR|ERVL -112576 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 272666 chr18 5120146 5121466 + 527.06 NA Intergenic L1M2|LINE|L1 39624 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 230501-4 chr8 130709490 130710447 + 527.06 NA Intergenic Intergenic -266294 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 306925 chr2 69000987 69002372 + 527.06 NA Intergenic L1PA15|LINE|L1 -11465 NM_053034 84168 Hs.165859 NM_018153 ENSG00000169604 ANTXR1 ATR|GAPO|TEM8 ANTXR cell adhesion molecule 1 protein-coding 199756 chr2 123890729 123891666 + 527.06 NA Intergenic L1MA2|LINE|L1 133977 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 178498-2 chr16 76759169 76760034 + 527.06 NA Intergenic AluY|SINE|Alu -109335 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA 376057 chr2 100497569 100499249 + 527.06 NA Intergenic Intergenic 27927 NM_001011717 129521 Hs.567676 NM_001011717 ENSG00000204640 NMS - neuromedin S protein-coding 195100 chr11 98991740 98992466 + 527.06 NA Intergenic L1MA4A|LINE|L1 -28846 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 202040-9 chr8 139565662 139566405 + 527.06 NA Intergenic Intergenic 137090 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 226284 chr8 138383066 138383875 + 527.06 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 113791 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 335035 chr1 185008484 185009941 + 527.06 NA TTS (NR_146489) TTS (NR_146489) 7685 NR_146489 101929069 Hs.497170 NR_146489 ENSG00000260976 LINC01633 GS1-120K12.4 long intergenic non-protein coding RNA 1633 ncRNA 191059-5 chr5 37921104 37922045 + 527.06 NA Intergenic L1ME3|LINE|L1 -26917 NR_134262 105374729 Hs.150642 NR_134262 ENSG00000251518 LINC02110 - long intergenic non-protein coding RNA 2110 ncRNA 244117 chr1 37205937 37206952 + 527.06 NA Intergenic L1MA7|LINE|L1 44881 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA 263969 chr3 24779432 24780617 + 527.06 NA Intergenic THE1D|LTR|ERVL-MaLR -49299 NM_001290216 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding 651622 chr20 42455005 42457846 + 527.06 NA intron (NM_133170, intron 8 of 31) L1ME3D|LINE|L1 -229058 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 256503-3 chr7 46468435 46469322 + 527.06 NA Intergenic HUERS-P3-int|LTR|ERV1 228244 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 205729-2 chr2 186319383 186320062 + 527.06 NA Intergenic L1MA1|LINE|L1 -166538 NM_018471 55854 Hs.741180 NM_018471 ENSG00000065548 ZC3H15 HT010|LEREPO4|MSTP012 zinc finger CCCH-type containing 15 protein-coding 189303-3 chr5 3369324 3370095 + 527.06 NA Intergenic L1MA6|LINE|L1 -83107 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA 188951-2 chr1 214759054 214760051 + 527.06 NA Intergenic THE1C|LTR|ERVL-MaLR 156357 NM_016343 1063 Hs.497741 NM_016343 ENSG00000117724 CENPF CENF|CILD31|PRO1779|STROMS|hcp-1 centromere protein F protein-coding 216885-5 chr6 94655844 94656563 + 527.06 NA Intergenic L1M1|LINE|L1 921248 NR_104136 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA 422263 chr1 40461895 40463794 + 527.06 NA exon (NM_023070, exon 5 of 5) exon (NM_023070, exon 5 of 5) 12368 NM_023070 65243 Hs.133034 NM_023070 ENSG00000187801 ZFP69B ZKSCAN23B|ZNF643|ZSCAN54B ZFP69 zinc finger protein B protein-coding 187458-7 chr8 46171997 46172560 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 445365 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 216534-6 chr6 159259529 159260200 + 527.06 NA intron (NM_032532, intron 18 of 22) intron (NM_032532, intron 18 of 22) -89857 NR_121668 101929122 Hs.134215 NR_121668 LOC101929122 - uncharacterized LOC101929122 ncRNA 273896-4 chrUn_KI270519v1 85012 86080 + 527.06 NA NA ALR/Alpha|Satellite|centr NA NA 192641-2 chr17 41141349 41141985 + 527.06 NA intron (NM_001277332, intron 2 of 5) LTR38A1|LTR|ERV1 -1180 NM_030976 81871 Hs.307014 NM_030976 ENSG00000198090 KRTAP4-6 KAP4.15|KAP4.6|KRTAP4-15|KRTAP4.15 keratin associated protein 4-6 protein-coding 240164-2 chr8 117297538 117298745 + 527.06 NA Intergenic Intergenic 163146 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 211088-3 chr7 45605171 45605977 + 527.06 NA intron (NM_001281768, intron 3 of 9) L1MD1|LINE|L1 31206 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding 333629 chr6 36175585 36176946 + 527.06 NA Intergenic L1MD1|LINE|L1 -20479 NM_015695 27154 Hs.520096 NM_015695 ENSG00000096070 BRPF3 - bromodomain and PHD finger containing 3 protein-coding 447914 chr2 89823127 89824952 + 527.06 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -186132 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 270821-3 chrX 58389268 58390352 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -479177 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 257030 chr18 12993824 12995040 + 527.06 NA intron (NM_032142, intron 1 of 44) intron (NM_032142, intron 1 of 44) 3070 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding 328271-2 chr2 37164735 37165950 + 527.06 NA Intergenic L1MEc|LINE|L1 -8295 NM_002759 5610 Hs.131431 NM_002759 ENSG00000055332 EIF2AK2 EIF2AK1|PKR|PPP1R83|PRKR eukaryotic translation initiation factor 2 alpha kinase 2 protein-coding 228393 chr14 72408159 72409008 + 527.06 NA intron (NM_001370288, intron 3 of 16) intron (NM_001370288, intron 3 of 16) -108237 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 558508 chr16 13696117 13698327 + 527.06 NA Intergenic L1MEg|LINE|L1 -222935 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 205202-6 chr17_GL000205v2_random 15071 16178 + 527.06 NA Intergenic CER|Satellite|Satellite 42342 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 452394 chr12 37969243 37971294 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -346506 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 187721-4 chr19 24352425 24353286 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -189408 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 220838-2 chr14 50470034 50471176 + 527.06 NA intron (NM_198794, intron 9 of 31) intron (NM_198794, intron 9 of 31) 61964 NM_198794 11183 Hs.130491 NM_006575 ENSG00000012983 MAP4K5 GCKR|KHS|KHS1|MAPKKKK5 mitogen-activated protein kinase kinase kinase kinase 5 protein-coding 183944-2 chr12 112913246 112913955 + 527.06 NA intron (NM_002534, intron 3 of 4) L1MEg|LINE|L1 6638 NM_016816 4938 Hs.524760 NM_002534 ENSG00000089127 OAS1 E18/E16|IFI-4|OIAS|OIASI 2'-5'-oligoadenylate synthetase 1 protein-coding 177883-5 chr22 30978845 30979614 + 527.06 NA non-coding (NR_152867, exon 4 of 4) non-coding (NR_152867, exon 4 of 4) 10018 NR_110492 55000 Hs.554829 NR_002323 ENSG00000253352 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 ncRNA 180869 chr11 78634823 78635589 + 527.06 NA Intergenic L1M2|LINE|L1 -60342 NM_001243251 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 182275-2 chr14 62332092 62332641 + 527.06 NA Intergenic L1MEc|LINE|L1 -192393 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 192728-8 chr9 96831950 96832758 + 527.06 NA intron (NM_001346995, intron 2 of 3) L1MDa|LINE|L1 22160 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 205554 chr2 154889206 154890185 + 527.06 NA Intergenic L1M3f|LINE|L1 191000 NM_002239 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding 233927-3 chr3 181982872 181983849 + 527.06 NA intron (NR_104146, intron 5 of 7) MER94|DNA|hAT-Blackjack 30996 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA 182187-11 chr8 139559542 139560369 + 527.06 NA Intergenic Intergenic 143168 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 198614-2 chr2 72043440 72044135 + 527.06 NA Intergenic L1MEh|LINE|L1 104075 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 223298-3 chr10 91662221 91663015 + 527.06 NA Intergenic Intergenic -29547 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding 293660 chr4 30683404 30684483 + 527.06 NA Intergenic Intergenic -36426 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 187106-4 chr5 144712406 144713222 + 527.06 NA Intergenic Intergenic 507423 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding 182099-2 chr2 158411013 158411606 + 527.06 NA intron (NM_138803, intron 1 of 13) L1MA9|LINE|L1 45444 NM_138803 130940 Hs.668597 NM_138803 ENSG00000153237 CCDC148 - coiled-coil domain containing 148 protein-coding 266341 chr6 52034018 52035132 + 527.06 NA intron (NM_138694, intron 28 of 66) L1M5|LINE|L1 53038 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding 221892-3 chr19 57985968 57986918 + 527.06 NA intron (NM_001348025, intron 6 of 6) AluJb|SINE|Alu -11909 NM_152474 147685 Hs.134209 NM_152474 ENSG00000177025 C19orf18 - chromosome 19 open reading frame 18 protein-coding 198614-5 chr7 62715448 62716276 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 588194 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 345400 chr1 153327251 153328580 + 527.06 NA Intergenic L1MC5|LINE|L1 -17197 NM_052891 114771 Hs.348266 NM_052891 ENSG00000159527 PGLYRP3 PGLYRPIalpha|PGRP-Ialpha|PGRPIA peptidoglycan recognition protein 3 protein-coding 225406 chr1 111063566 111064612 + 527.06 NA Intergenic MLT1H-int|LTR|ERVL-MaLR -75294 NM_001007794 10390 Hs.363572 NM_006090 ENSG00000134255 CEPT1 - choline/ethanolamine phosphotransferase 1 protein-coding 208101-2 chr14 61959149 61960162 + 527.06 NA intron (NM_001367663, intron 1 of 7) L1MA10|LINE|L1 31960 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 260192 chr1 173028720 173030158 + 527.06 NA Intergenic Intergenic 21524 NM_005092 8995 Hs.248197 NM_005092 ENSG00000120337 TNFSF18 AITRL|GITRL|TL6|TNLG2A|hGITRL TNF superfamily member 18 protein-coding 215392-2 chr12 3850463 3851258 + 527.06 NA intron (NM_020367, intron 1 of 7) Tigger4|DNA|TcMar-Tigger 22539 NR_104461 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding 232170-2 chr12 37922960 37923793 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -393398 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 187458-4 chr18 20938591 20939540 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 172748 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding 204499-5 chr4 57753587 57754408 + 527.06 NA Intergenic HAL1b|LINE|L1 328125 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 203972-2 chr14 47891797 47892805 + 527.06 NA Intergenic L1MA4|LINE|L1 -97287 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 281099 chr12 38019531 38021139 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -296439 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 349353 chr12 132926077 132927339 + 527.06 NA exon (NM_183238, exon 5 of 5) exon (NM_183238, exon 5 of 5) 29598 NM_001164715 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding 385632 chr14 46781820 46783103 + 527.06 NA Intergenic L1P4a|LINE|L1 -130680 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding 188073-3 chr3 127190214 127191206 + 527.06 NA Intergenic L1M5|LINE|L1 -2421 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding 380713 chr1 42017899 42019649 + 527.06 NA intron (NR_038261, intron 1 of 3) MER34B|LTR|ERV1 17160 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 305695 chr16 13655166 13656455 + 527.06 NA Intergenic L1MC5a|LINE|L1 -264347 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 259314-2 chr2 56240505 56242107 + 527.06 NA intron (NM_001348516, intron 2 of 2) L1MA3|LINE|L1 -55536 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 215128 chr10 58535495 58536299 + 527.06 NA intron (NM_001080512, intron 1 of 20) L1PB4|LINE|L1 23025 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 183593-5 chr2 52648208 52648996 + 527.06 NA Intergenic THE1D-int|LTR|ERVL-MaLR 54013 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 246488 chr5 105699225 105700010 + 527.06 NA Intergenic Intergenic 600143 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 207837-2 chr10 43618382 43619408 + 527.06 NA TTS (NM_001318140) TTS (NM_001318140) -9922 NR_038867 414201 Hs.666576 NR_038867 ENSG00000223910 ZNF32-AS3 C10orf44|ZNF32-OT1|bA402L1.3 ZNF32 antisense RNA 3 ncRNA 250793 chr11 54884115 54884964 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 177707 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 244819-2 chr2 23170729 23171644 + 527.06 NA Intergenic L1MEb|LINE|L1 -213993 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding 195715-2 chr2 124204373 124205042 + 527.06 NA intron (NM_130773, intron 1 of 23) THE1B|LTR|ERVL-MaLR 179420 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 272402-2 chr19 51917948 51918756 + 527.06 NA Intergenic MER1A|DNA|hAT-Charlie -9120 NM_001031721 79898 Hs.183390 NM_024840 ENSG00000176024 ZNF613 - zinc finger protein 613 protein-coding 230062-3 chr10 44502824 44503723 + 527.06 NA Intergenic L1MD2|LINE|L1 -118176 NM_000609 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 228569 chr10 41746843 41747921 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 620663 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 191586 chr1 112080097 112080806 + 527.06 NA Intergenic MIR3|SINE|MIR 89915 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 189917-3 chr2 114895006 114895985 + 527.06 NA intron (NM_001321910, intron 2 of 26) MLT1J2|LTR|ERVL-MaLR -61947 NR_132105 101927591 Hs.553019 NR_132105 ENSG00000231538 DPP10-AS3 - DPP10 antisense RNA 3 ncRNA 253867-2 chr8 138431962 138432643 + 527.06 NA intron (NM_001362965, intron 1 of 19) L2a|LINE|L2 64959 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 195364-4 chr3 108704439 108705318 + 527.06 NA Intergenic L1MD3|LINE|L1 52405 NM_032579 84666 Hs.307047 NM_032579 ENSG00000163515 RETNLB FIZZ1|FIZZ2|HXCP2|RELM-beta|RELMb|RELMbeta|XCP2 resistin like beta protein-coding 198526 chr20 52794700 52795756 + 527.06 NA Intergenic Intergenic 174390 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 554555 chr2 98248350 98250673 + 527.06 NA intron (NM_001345864, intron 13 of 21) L1MD2|LINE|L1 -96644 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 465570 chr8 139668673 139671197 + 527.06 NA intron (NR_104210, intron 1 of 3) Tigger1|DNA|TcMar-Tigger 33188 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 224967-8 chrUn_KI270756v1 4961 6092 + 527.06 NA NA (CCATTCCATT)n|Simple_repeat|Simple_repeat NA NA 221805 chr19 37452535 37453592 + 527.06 NA intron (NM_152484, intron 2 of 5) L1M4c|LINE|L1 14381 NM_001330482 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding 230150-3 chr20 31191630 31192516 + 527.06 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -65591 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 260104-2 chr17 71269740 71270761 + 527.06 NA Intergenic L1MA9|LINE|L1 -68071 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 189742-6 chrUn_KI270442v1 71426 72141 + 527.06 NA NA (TGGAA)n|Simple_repeat|Simple_repeat NA NA 398984 chr5 30702596 30704358 + 527.06 NA Intergenic L1MA3|LINE|L1 -490209 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 195364-3 chr2 114241274 114242291 + 527.06 NA Intergenic Intergenic -200859 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 187633-2 chr5 103795464 103796119 + 527.06 NA Intergenic AluY|SINE|Alu -233002 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding 254043-3 chr7 62850687 62852029 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr 452698 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 229271 chr1 112096827 112097754 + 527.06 NA Intergenic ERVL-E-int|LTR|ERVL 106754 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 318432-2 chr5 44080627 44081749 + 527.06 NA Intergenic L2a|LINE|L2 -307544 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 195188-3 chr20 2336688 2337362 + 527.06 NA intron (NM_003245, intron 11 of 12) L2a|LINE|L2 41024 NM_003245 7053 Hs.2022 NM_003245 ENSG00000125780 TGM3 TGE|UHS2 transglutaminase 3 protein-coding 189830 chr1 75867435 75868290 + 527.06 NA intron (NM_002440, intron 9 of 19) L1MC4|LINE|L1 64542 NM_080868 127247 Hs.125423 NM_080868 ENSG00000154007 ASB17 Asb-17 ankyrin repeat and SOCS box containing 17 protein-coding 530926 chr5 46258925 46261323 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -563744 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 464691 chr12 37902588 37904228 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -413366 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 470226 chr12 14379394 14381188 + 527.06 NA intron (NM_001286515, intron 1 of 12) HAL1|LINE|L1 -4990 NM_181352 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 203621-2 chr2 68698481 68699209 + 527.06 NA Intergenic Intergenic -35966 NM_001007231 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding 230238 chr17 61569681 61570802 + 527.06 NA Intergenic L1M4|LINE|L1 20978 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 256591 chr4 34467718 34469003 + 527.06 NA Intergenic Intergenic -198613 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 183153-7 chr5 16252583 16253244 + 527.06 NA Intergenic L2a|LINE|L2 72672 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA 201688-7 chr7 64674495 64675283 + 527.06 NA intron (NM_016220, intron 2 of 6) L1PA15|LINE|L1 -4175 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 237353-4 chr8 139992918 139993877 + 527.06 NA intron (NM_001160372, intron 18 of 22) L1ME3Cz|LINE|L1 107138 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 395383 chr22 34214064 34215305 + 527.06 NA Intergenic L1MEd|LINE|L1 -291796 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 192026-2 chr11 11751782 11752427 + 527.06 NA Intergenic Intergenic 31118 NR_107037 102465870 NR_107037 ENSG00000278529 MIR8070 hsa-mir-8070 microRNA 8070 ncRNA 208804-6 chr8 54900864 54901490 + 527.06 NA Intergenic L1MEc|LINE|L1 -200851 NM_052898 114786 Hs.130197 NM_052898 ENSG00000206579 XKR4 XRG4 XK related 4 protein-coding 186931-3 chr11 102572523 102573161 + 527.06 NA Intergenic Intergenic -42095 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding 180167-2 chr16 62690429 62691036 + 527.06 NA Intergenic L1MA6|LINE|L1 -654294 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 224879-2 chr21 14797831 14798658 + 527.06 NA Intergenic L1M3c|LINE|L1 120424 NR_146322 107987295 NR_146322 LINC02246 - long intergenic non-protein coding RNA 2246 ncRNA 227954-2 chr6 52119094 52120032 + 527.06 NA Intergenic L1ME1|LINE|L1 -24786 NR_029713 406989 NR_029713 ENSG00000207604 MIR206 MIRN206|miRNA206|mir-206 microRNA 206 ncRNA 180342 chr11 84769213 84769900 + 527.06 NA intron (NM_001351274, intron 5 of 26) L1PA16|LINE|L1 -48614 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 552886 chr9 98460501 98462728 + 527.06 NA intron (NM_005458, intron 6 of 18) L1MEg|LINE|L1 -205965 NR_051978 55357 Hs.371016 NM_018421 ENSG00000095383 TBC1D2 PARIS-1|PARIS1|TBC1D2A TBC1 domain family member 2 protein-coding 177531-8 chr7 25448243 25448807 + 527.06 NA Intergenic L1MEh|LINE|L1 214615 NR_157829 646588 Hs.72068 NR_157808 ENSG00000223561 LOC646588 - uncharacterized LOC646588 ncRNA 242184 chr1 60181080 60182238 + 527.06 NA Intergenic L1MEc|LINE|L1 -107889 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding 273017 chr3 84901865 84902935 + 527.06 NA Intergenic MIR|SINE|MIR 20310 NR_147147 105377192 NR_147147 ENSG00000242339 LINC02025 - long intergenic non-protein coding RNA 2025 ncRNA 198965-4 chr2 120726968 120727580 + 527.06 NA Intergenic AluJr4|SINE|Alu -8594 NM_001371271 197560-5 chr6 169295692 169296600 + 527.06 NA Intergenic Intergenic -42032 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding 177707-3 chr17 61094985 61095424 + 527.06 NA intron (NM_001330413, intron 23 of 25) Charlie1a|DNA|hAT-Charlie 272500 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 211000 chr11 55053307 55054103 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -208450 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 178322-4 chr14 79131863 79132634 + 527.06 NA intron (NR_073547, intron 14 of 20) Charlie5|DNA|hAT-Charlie -67734 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA 312722 chr5 39359344 39360676 + 527.06 NA intron (NM_001737, intron 1 of 10) intron (NM_001737, intron 1 of 10) 4485 NM_001737 735 Hs.654443 NM_001737 ENSG00000113600 C9 ARMD15|C9D complement C9 protein-coding 215568 chr11 12656088 12656993 + 527.06 NA Intergenic Intergenic -17881 NM_021961 7003 Hs.655331 NM_021961 ENSG00000187079 TEAD1 AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1 TEA domain transcription factor 1 protein-coding 251847 chr2 31699826 31700757 + 527.06 NA Intergenic L1M3b|LINE|L1 103689 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 360685 chr10 48639856 48641594 + 527.06 NA intron (NM_001347738, intron 2 of 10) L1MB7|LINE|L1 11777 NM_001256025 58504 Hs.655672 NM_021226 ENSG00000128805 ARHGAP22 RhoGAP2|RhoGap22 Rho GTPase activating protein 22 protein-coding 262564-2 chr5 44157601 44158736 + 527.06 NA Intergenic MER61-int|LTR|ERV1 -230564 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 207135-4 chr2 116294974 116295680 + 527.06 NA Intergenic Intergenic 951512 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 338812 chr12 16133404 16134765 + 527.06 NA Intergenic MER127|DNA|TcMar-Tigger 143601 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 280747-2 chr20 39748380 39749601 + 527.06 NA Intergenic L1M1|LINE|L1 -255471 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 341798 chr8 135019837 135021286 + 527.06 NA Intergenic L2a|LINE|L2 170626 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 211702-2 chr8 110005188 110005965 + 527.06 NA Intergenic L1M1|LINE|L1 -29805 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 178673-2 chr6 14170894 14171686 + 527.06 NA Intergenic L1MB7|LINE|L1 53518 NM_004233 9308 Hs.595133 NM_004233 ENSG00000112149 CD83 BL11|HB15 CD83 molecule protein-coding 182890-6 chr6 40117743 40118499 + 527.06 NA Intergenic Intergenic -183659 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 279781 chr13 96813570 96814653 + 527.06 NA intron (NM_153456, intron 1 of 1) intron (NM_153456, intron 1 of 1) 170061 NR_051966 100887754 Hs.617003 NR_051966 LINC00359 - long intergenic non-protein coding RNA 359 ncRNA 192465-6 chr2 103272509 103273197 + 527.06 NA Intergenic L1MEg|LINE|L1 -288424 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 219169-2 chr1 232839937 232841030 + 527.06 NA Intergenic Intergenic 35591 NM_019090 54627 Hs.160373 NM_019090 ENSG00000212916 MAP10 KIAA1383|MTR120 microtubule associated protein 10 protein-coding 285842 chr10 41860838 41861949 + 527.06 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 506652 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 271524 chr11 55197013 55198102 + 527.06 NA Intergenic ALR/Alpha|Satellite|centr -64598 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 183329-4 chr4 28087439 28088139 + 527.06 NA Intergenic Intergenic -731793 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA 383348 chr5 128096412 128097790 + 527.06 NA intron (NM_001046, intron 1 of 26) intron (NM_001046, intron 1 of 26) 13335 NR_046207 6558 Hs.162585 NM_001046 ENSG00000064651 SLC12A2 BSC|BSC2|NKCC1|PPP1R141 solute carrier family 12 member 2 protein-coding 273632 chr10 43534413 43535238 + 527.06 NA Intergenic L1MEc|LINE|L1 33634 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 253252 chr16 68561451 68562559 + 527.06 NA intron (NM_001305204, intron 4 of 4) L1ME2z|LINE|L1 22714 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 206608-2 chr11 90788329 90789291 + 439.217 NA intron (NR_104190, intron 3 of 6) L1M4|LINE|L1 80392 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 243502-2 chr11 110051213 110052843 + 439.217 NA Intergenic L1ME2|LINE|L1 -41364 NM_033390 85463 Hs.376289 NM_033390 ENSG00000149289 ZC3H12C MCPIP3 zinc finger CCCH-type containing 12C protein-coding 214514 chr6 149196663 149197678 + 439.217 NA Intergenic Intergenic -20754 NR_125861 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding 246313-2 chr9 96821916 96822966 + 439.217 NA intron (NM_001001662, intron 5 of 5) intron (NM_001001662, intron 5 of 5) 32073 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 183153-6 chr4 67601107 67601932 + 439.217 NA intron (NM_012108, intron 8 of 8) L1M1|LINE|L1 42792 NM_001317769 26228 Hs.435579 NM_012108 ENSG00000035720 STAP1 BRDG1|STAP-1 signal transducing adaptor family member 1 protein-coding 201776-6 chr6 164320154 164321187 + 439.217 NA Intergenic Intergenic 501393 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA 201864-3 chr18 5115617 5116536 + 439.217 NA Intergenic L1MA3|LINE|L1 34894 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 185877-3 chr8 113704407 113705189 + 439.217 NA Intergenic L1MCc|LINE|L1 -267859 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 258611-2 chr6 61476919 61478115 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -96613 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 239198 chr11 88227748 88228750 + 439.217 NA Intergenic L1PB4|LINE|L1 51747 NR_036124 100423040 NR_036124 ENSG00000266581 MIR3166 - microRNA 3166 ncRNA 270030-3 chr2 46217532 46218647 + 439.217 NA Intergenic L1M1|LINE|L1 -79318 NM_001430 2034 Hs.468410 NM_001430 ENSG00000116016 EPAS1 ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73 endothelial PAS domain protein 1 protein-coding 284964 chr2 138262657 138264075 + 439.217 NA Intergenic Intergenic 161482 NR_135526 105373635 NR_135526 ENSG00000224231 LINC01832 - long intergenic non-protein coding RNA 1832 ncRNA 181309-10 chr5 30637245 30637804 + 439.217 NA Intergenic L1MB1|LINE|L1 -556162 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 187897-7 chr3 98228287 98229075 + 439.217 NA Intergenic LTR8|LTR|ERV1 -35563 NM_001005479 79295 Hs.554712 NM_001005479 ENSG00000230301 OR5H6 OR3-11 olfactory receptor family 5 subfamily H member 6 (gene/pseudogene) protein-coding 179464-2 chr18 13354734 13355386 + 439.217 NA intron (NM_181482, intron 2 of 5) intron (NM_181482, intron 2 of 5) 72474 NR_040031 100288122 Hs.646264 NR_040031 ENSG00000267690 LDLRAD4-AS1 - LDLRAD4 antisense RNA 1 ncRNA 320892-2 chr6 40016409 40017697 + 439.217 NA Intergenic L1MA4|LINE|L1 -82591 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 217149-4 chr12 83603553 83604606 + 439.217 NA Intergenic Intergenic 916924 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding 236913 chr8 52805941 52806874 + 439.217 NA Intergenic LTR61|LTR|ERV1 -91941 NM_001083617 9821 Hs.196102 NM_014781 ENSG00000023287 RB1CC1 ATG17|CC1|FIP200|PPP1R131 RB1 inducible coiled-coil 1 protein-coding 200898-6 chr8 138391485 138392488 + 439.217 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 105275 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 252725 chr1 42055961 42057139 + 439.217 NA Intergenic L1ME3Cz|LINE|L1 -20616 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 493416 chr12 37884508 37886757 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -431142 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 245347 chr14 68346054 68347423 + 439.217 NA intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 282049 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 275301 chr15 99941020 99942258 + 439.217 NA Intergenic L1MA9|LINE|L1 134616 NR_135737 400464 Hs.187134 NM_001013670 ENSG00000259363 LOC400464 - ubiquitin conjugating enzyme E2 Q2 pseudogene pseudo 217412-3 chr9 31003733 31004474 + 439.217 NA Intergenic L1MD1|LINE|L1 377387 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 204060 chr17 61716869 61717672 + 439.217 NA intron (NM_032043, intron 16 of 19) L1MEc|LINE|L1 -126051 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 289883-2 chr8 134767187 134768488 + 439.217 NA Intergenic L1MEg|LINE|L1 32770 NR_029666 407030 NR_029666 ENSG00000207582 MIR30B MIRN30B|mir-30b microRNA 30b ncRNA 320540 chr1 11508275 11509624 + 439.217 NA intron (NM_020780, intron 3 of 20) L1MEc|LINE|L1 29794 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding 211439-3 chr8 114159473 114160491 + 439.217 NA Intergenic LTR8|LTR|ERV1 -723043 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 230940 chr5 38273404 38274475 + 439.217 NA intron (NM_152403, intron 1 of 21) L1MA8|LINE|L1 15380 NM_001205301 133584 Hs.20103 NM_152403 ENSG00000164318 EGFLAM AGRINL|AGRNL|PIKA EGF like, fibronectin type III and laminin G domains protein-coding 198438-3 chr10 53669382 53670267 + 439.217 NA Intergenic L1PA16|LINE|L1 -816406 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 223649 chr11 50576052 50577361 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 167559 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 218379-3 chr8 125710333 125711380 + 439.217 NA Intergenic Tigger2a|DNA|TcMar-Tigger 240341 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 257820-2 chr5 46153609 46154980 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -457914 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 232697 chr10 32600265 32601245 + 439.217 NA intron (NM_001321115, intron 19 of 43) L1M4|LINE|L1 154615 NM_001321115 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding 309911 chr4 49098442 49099948 + 439.217 NA Intergenic (CATTC)n|Satellite|Satellite 112553 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 288741 chr1 159591587 159592975 + 439.217 NA Intergenic Intergenic 4455 NM_001639 325 Hs.507080 NM_001639 ENSG00000132703 APCS HEL-S-92n|PTX2|SAP amyloid P component, serum protein-coding 231994 chr11 30061965 30062787 + 439.217 NA Intergenic L1MB7|LINE|L1 -45346 NM_002233 3739 Hs.592002 NM_002233 ENSG00000182255 KCNA4 HBK4|HK1|HPCN2|HUKII|KCNA4L|KCNA8|KV1.4|MCIDDS|PCN2 potassium voltage-gated channel subfamily A member 4 protein-coding 193343 chr19 9450806 9451737 + 439.217 NA Intergenic L1PA16|LINE|L1 -15693 NM_006631 10781 Hs.656185 NM_006631 ENSG00000174652 ZNF266 HZF1 zinc finger protein 266 protein-coding 393187 chr5 46136900 46138897 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -441518 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 186228-7 chr4 129059483 129060461 + 439.217 NA intron (NM_001300898, intron 2 of 5) L1M2a|LINE|L1 33567 NM_144643 132320 Hs.654690 NM_144643 ENSG00000151466 SCLT1 CAP-1A|CAP1A sodium channel and clathrin linker 1 protein-coding 231643-2 chr7 4499798 4500725 + 439.217 NA Intergenic LTR10A|LTR|ERV1 -182034 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 193783-3 chr6 155386205 155387404 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR 69035 NM_015718 50508 Hs.247776 NM_015718 ENSG00000074771 NOX3 GP91-3|MOX-2 NADPH oxidase 3 protein-coding 204499-6 chr5 26160232 26161378 + 439.217 NA Intergenic AluSx|SINE|Alu 877781 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 203006-2 chr5 42295029 42296098 + 439.217 NA Intergenic LTR31|LTR|ERV1 -120218 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 186140-8 chr3 156990673 156991762 + 439.217 NA intron (NM_001004316, intron 7 of 12) L1ME3B|LINE|L1 -90624 NR_135546 105374177 Hs.634263 NR_135546 ENSG00000241544 LINC02029 - long intergenic non-protein coding RNA 2029 ncRNA 212669-5 chrX 78249152 78250322 + 439.217 NA Intergenic L1PB4|LINE|L1 77874 NM_006639 10800 Hs.733809 NM_006639 ENSG00000173198 CYSLTR1 CYSLT1|CYSLT1R|CYSLTR|HMTMF81 cysteinyl leukotriene receptor 1 protein-coding 205378-4 chr14 72283992 72284930 + 439.217 NA intron (NM_001370288, intron 2 of 16) THE1B-int|LTR|ERVL-MaLR -232359 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 190796-6 chr5 123989140 123989916 + 439.217 NA Intergenic AluJb|SINE|Alu 444111 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 183241-4 chr15 61614898 61615845 + 439.217 NA Intergenic L1MB1|LINE|L1 -114547 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA 184207-2 chr13 93018295 93019046 + 439.217 NA Intergenic L1ME3E|LINE|L1 -26671 NR_126360 104326053 Hs.578064 NR_126360 LINC00363 TCONS_00021586 long intergenic non-protein coding RNA 363 ncRNA 244117-2 chr9 93987362 93988360 + 439.217 NA Intergenic AluSx|SINE|Alu 32027 NR_144455 101928040 Hs.375820 NR_144455 ENSG00000235601 BARX1-DT BARX1-AS1 BARX1 divergent transcript ncRNA 193870-7 chr9 84465509 84466401 + 439.217 NA Intergenic Intergenic -97228 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding 203533-3 chr4 49102281 49103115 + 439.217 NA Intergenic (CATTC)n|Satellite|Satellite 116056 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 183768-8 chr8 131736610 131737581 + 439.217 NA Intergenic Intergenic -166998 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 263267 chr19 27585517 27586723 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -207311 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 185877 chr14 43920592 43921781 + 439.217 NA Intergenic L1MA3|LINE|L1 586097 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 177268-3 chr21 28376213 28376893 + 439.217 NA Intergenic Intergenic -147886 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 193782-5 chr8 142086647 142087699 + 439.217 NA Intergenic Tigger3a|DNA|TcMar-Tigger -89166 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA 198877 chr11 6725953 6726744 + 439.217 NA Intergenic L1M3f|LINE|L1 -4469 NR_003945 387751 Hs.494757 NR_003945 ENSG00000254838 GVINP1 GVIN1|GVIN1P|VLIG-1|VLIG1 GTPase, very large interferon inducible pseudogene 1 pseudo 381065 chr5 46073379 46075276 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -377947 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 205553-2 chr2 49094764 49095477 + 439.217 NA intron (NM_000145, intron 1 of 9) L1MB7|LINE|L1 35517 NR_107011 102465854 NR_107011 ENSG00000212036 MIR548BA hsa-mir-548ba microRNA 548ba ncRNA 188863-10 chr9 92844602 92845542 + 439.217 NA 3' UTR (NM_031486, exon 5 of 5) 3' UTR (NM_031486, exon 5 of 5) 32896 NM_001354536 83744 Hs.668378 NM_031486 ENSG00000127081 ZNF484 BA526D8.4 zinc finger protein 484 protein-coding 232521-4 chr8 139519849 139521069 + 439.217 NA Intergenic L1MA5A|LINE|L1 182664 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 205729 chr19 30178668 30179687 + 439.217 NA Intergenic L1MEf|LINE|L1 -193207 NM_014717 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 181572-6 chr21 29986275 29987046 + 439.217 NA Intergenic L1MD2|LINE|L1 -46608 NM_001320630 2897 Hs.664641 NM_000830 ENSG00000171189 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5 glutamate ionotropic receptor kainate type subunit 1 protein-coding 203094 chr2 239884792 239885664 + 439.217 NA Intergenic L1MB7|LINE|L1 57866 NR_039949 100616417 NR_039949 ENSG00000264279 MIR4786 mir-4786 microRNA 4786 ncRNA 265550-2 chr8 83464370 83465415 + 439.217 NA Intergenic Intergenic 61134 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 226724 chr5 7436543 7437592 + 439.217 NA intron (NM_020546, intron 2 of 24) intron (NM_020546, intron 2 of 24) 40929 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding 209418 chr11 13577676 13578621 + 439.217 NA Intergenic L2|LINE|L2 -81973 NM_001316352 5741 Hs.37045 NM_000315 ENSG00000152266 PTH PTH1 parathyroid hormone protein-coding 179640 chr19 36733936 36734600 + 439.217 NA Intergenic AluJr|SINE|Alu 30587 NM_001363651 163081 Hs.412517 NM_152603 ENSG00000189042 ZNF567 - zinc finger protein 567 protein-coding 240779 chr7 45953433 45954607 + 439.217 NA Intergenic MER21C|LTR|ERVL -32748 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 336528-2 chr11 48246724 48248597 + 439.217 NA Intergenic Intergenic 2556 NM_001004727 119764 Hs.553565 NM_001004727 ENSG00000172208 OR4X2 OR11-105 olfactory receptor family 4 subfamily X member 2 (gene/pseudogene) protein-coding 201688-6 chr6 61507403 61508163 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -66347 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 184647 chr19 58169362 58170140 + 439.217 NA Intergenic L1ME3|LINE|L1 -13238 NM_016325 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding 298755-3 chr8 122904821 122906302 + 439.217 NA intron (NM_001362797, intron 3 of 4) L1MDa|LINE|L1 120211 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding 179113-3 chr21 35177693 35178681 + 439.217 NA Intergenic LTR33|LTR|ERVL -128889 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding 204587-7 chr8 121180262 121181346 + 439.217 NA Intergenic L1MA8|LINE|L1 -368758 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 235947-2 chr22 32679725 32680634 + 439.217 NA intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -120637 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding 181660-5 chr8 108817932 108818762 + 439.217 NA Intergenic Intergenic -30753 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding 267044-2 chr3 193247592 193248825 + 439.217 NA intron (NM_020386, intron 1 of 3) L1MA7|LINE|L1 6429 NR_026877 84789 Hs.676481 NM_032703 MGC2889 - uncharacterized protein MGC2889 ncRNA 223122-2 chr3 90450089 90451106 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 1342976 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 312107-2 chr17 71895845 71897100 + 439.217 NA Intergenic L2c|LINE|L2 129507 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 253428-2 chr19 56373601 56374832 + 439.217 NA intron (NR_024057, intron 4 of 4) MER68|LTR|ERVL -5833 NM_001322072 79149 Hs.177688 NM_024303 ENSG00000131848 ZSCAN5A ZNF495|ZSCAN5 zinc finger and SCAN domain containing 5A protein-coding 195364 chr1 221105858 221106816 + 439.217 NA Intergenic L1ME4a|LINE|L1 -226197 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA 236562-5 chr4 55530791 55531867 + 439.217 NA intron (NM_004898, intron 1 of 22) HAL1ME|LINE|L1 14603 NM_001267843 9575 Hs.436975 NM_004898 ENSG00000134852 CLOCK KAT13D|bHLHe8 clock circadian regulator protein-coding 211615-4 chr5 2551838 2552895 + 439.217 NA Intergenic L1ME2|LINE|L1 -160225 NR_145480 101234261 NR_145480 ENSG00000281560 LSINCT5 - long stress-induced non-coding transcript 5 ncRNA 275126 chr2 197055021 197056514 + 439.217 NA intron (NM_001367496, intron 16 of 27) L1M5|LINE|L1 -129060 NM_001321100 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding 235684-5 chr6 69926712 69927769 + 439.217 NA intron (NM_001858, intron 4 of 50) L1M4|LINE|L1 60684 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding 253516-2 chr5 63992647 63993825 + 439.217 NA Intergenic L1MC4|LINE|L1 -30944 NM_000524 3350 Hs.247940 NM_000524 ENSG00000178394 HTR1A 5-HT-1A|5-HT1A|5HT1a|ADRB2RL1|ADRBRL1|G-21|PFMCD 5-hydroxytryptamine receptor 1A protein-coding 294539-3 chr7 36937279 36938693 + 439.217 NA intron (NM_001206480, intron 16 of 21) intron (NM_001206480, intron 16 of 21) -18554 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA 408208 chr5 46066001 46068050 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -370645 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 213635-6 chr8 48414073 48415026 + 439.217 NA Intergenic L1MB5|LINE|L1 -137018 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA 211088 chr2 240271471 240272476 + 439.217 NA Intergenic L1ME2|LINE|L1 -131315 NM_148961 150677 Hs.148586 NM_148961 ENSG00000178602 OTOS OTOSP otospiralin protein-coding 181748-6 chr4 66164809 66165809 + 439.217 NA Intergenic LTR16B1|LTR|ERVL -111515 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 231467-3 chr4 58006094 58007119 + 439.217 NA Intergenic Intergenic 529722 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA 197648-5 chr2 209377641 209378441 + 439.217 NA Intergenic Intergenic -46006 NM_001039538 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding 307364 chr14 33086785 33088098 + 439.217 NA intron (NM_001164749, intron 2 of 11) intron (NM_001164749, intron 2 of 11) 148562 NM_001165893 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 207486-3 chr7 62969497 62970397 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 334109 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 295769-2 chr17 62865621 62866812 + 439.217 NA Intergenic Intergenic 57714 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA 228744-4 chr8 102398683 102399579 + 439.217 NA intron (NM_001282873, intron 1 of 58) intron (NM_001282873, intron 1 of 58) 13558 NM_001282873 51366 Hs.492445 NM_015902 ENSG00000104517 UBR5 DD5|EDD|EDD1|HYD ubiquitin protein ligase E3 component n-recognin 5 protein-coding 240427 chr2 68916716 68917713 + 439.217 NA Intergenic L1MB5|LINE|L1 35679 NM_182536 200504 Hs.16757 NM_182536 ENSG00000183607 GKN2 BRICD1B|GDDR|PRO813|TFIZ1|VLTI465 gastrokine 2 protein-coding 182714-8 chr8 118529822 118530605 + 439.217 NA intron (NM_001101676, intron 2 of 4) L1PA15|LINE|L1 -90788 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 295329 chr12 37907316 37908667 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -408783 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 239812 chr21 32051635 32053026 + 439.217 NA Intergenic L1ME3A|LINE|L1 33965 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA 182275-3 chr16 26773020 26773940 + 439.217 NA Intergenic Intergenic -293447 NM_001145545 162083 Hs.120831 NM_182831 C16orf82 TNT chromosome 16 open reading frame 82 protein-coding 195188-2 chr2 58940387 58941245 + 439.217 NA intron (NR_033873, intron 6 of 13) L1MEc|LINE|L1 -276892 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 240779-2 chr8 63694865 63695858 + 439.217 NA Intergenic L1MB7|LINE|L1 -74069 NR_038875 286184 Hs.586402 NR_038875 ENSG00000253734 LINC01289 - long intergenic non-protein coding RNA 1289 ncRNA 224703 chr18 75571351 75572081 + 439.217 NA Intergenic MER57B1|LTR|ERV1 140687 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA 194749-3 chr7 62750452 62751652 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 553004 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 203182-4 chr8 108964446 108965348 + 439.217 NA Intergenic Intergenic -121731 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding 227075 chr13 97073950 97075205 + 439.217 NA Intergenic L1MB7|LINE|L1 -79847 NM_001346197 27199 Hs.352218 NM_080818 ENSG00000165621 OXGR1 GPR80|GPR99|P2RY15|P2Y15|aKGR oxoglutarate receptor 1 protein-coding 205378-3 chr12 37847572 37848671 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -468653 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 213108-3 chr3 94549648 94550607 + 439.217 NA Intergenic L1PA15|LINE|L1 -388136 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA 228393-3 chr2 161807290 161808337 + 439.217 NA intron (NM_001354443, intron 4 of 25) intron (NM_001354443, intron 4 of 25) 183397 NM_001354442 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding 209858-2 chr14 45351881 45353012 + 439.217 NA Intergenic Intergenic -99244 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 184207 chr11 116069854 116070603 + 439.217 NA Intergenic L1ME4c|LINE|L1 -310028 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA 343819 chr12 37905196 37906666 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -410843 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 224791-4 chr5 113707658 113708841 + 439.217 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 194555 NM_022828 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding 445981 chr8 131006409 131008612 + 439.217 NA intron (NM_001115, intron 1 of 17) MER20|DNA|hAT-Charlie 33399 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 226812 chr11 55013032 55014227 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -248526 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 606295 chr4 49090416 49093506 + 439.217 NA Intergenic (CATTC)n|Satellite|Satellite 105319 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 192114-3 chr17_GL000205v2_random 31680 32894 + 439.217 NA Intergenic CER|Satellite|Satellite 25679 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 315006 chr2 108130866 108132554 + 439.217 NA Intergenic Intergenic -78955 NR_135071 107178918 NR_135071 ENSG00000231221 LINC01593 - long intergenic non-protein coding RNA 1593 ncRNA 181045-4 chr14 78512198 78512933 + 439.217 NA intron (NM_004796, intron 1 of 16) intron (NM_004796, intron 1 of 16) 108846 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 246928-2 chr18 70589673 70590921 + 439.217 NA Intergenic L1M3de|LINE|L1 60657 NR_160904 220158 Hs.448217 NM_178506 GTSCR1 - Gilles de la Tourette syndrome chromosome region, candidate 1 ncRNA 211176-2 chr3 173427814 173428979 + 439.217 NA intron (NM_001365932, intron 1 of 5) L1MA5|LINE|L1 30652 NM_001365935 22871 Hs.478289 NM_014932 ENSG00000169760 NLGN1 NL1 neuroligin 1 protein-coding 298931 chr7 62991186 62992864 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 312031 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 202830-5 chr18 1627786 1628711 + 439.217 NA Intergenic L1MB8|LINE|L1 -268619 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 182539 chr1 42090249 42091075 + 439.217 NA Intergenic L1ME3A|LINE|L1 -54728 NR_038261 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 241657-2 chr3 104997656 104998979 + 439.217 NA Intergenic L1PA17|LINE|L1 -368396 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 183680-2 chr14 61374029 61374926 + 439.217 NA intron (NM_006255, intron 1 of 13) MSTA-int|LTR|ERVL-MaLR 53034 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding 199317-5 chr6 144902027 144902915 + 439.217 NA Intergenic L1MB5|LINE|L1 496816 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA 226197-2 chr9 4402527 4403639 + 439.217 NA Intergenic L1MA2|LINE|L1 -87385 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding 245522 chr19 56528227 56529427 + 439.217 NA 3' UTR (NM_020813, exon 5 of 5) 3' UTR (NM_020813, exon 5 of 5) -10121 NM_001308440 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding 201864-4 chr2 18636765 18637435 + 439.217 NA Intergenic L1PA11|LINE|L1 -47520 NM_001199104 100526794 Hs.744358 NM_001199103 ENSG00000250741 NT5C1B-RDH14 AIRP|NT5C1B|cN-IB|cN1B NT5C1B-RDH14 readthrough protein-coding 202391-2 chr10 53484538 53485477 + 439.217 NA Intergenic Intergenic -713307 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 188073-6 chr6 106810805 106811514 + 439.217 NA Intergenic L1PA13|LINE|L1 -23618 NR_147987 100422737 Hs.634681 NR_015365 ENSG00000235142 LINC02532 - long intergenic non-protein coding RNA 2532 ncRNA 214865-2 chr7 1343231 1344238 + 439.217 NA Intergenic Intergenic 110862 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding 224967-4 chr8 104556072 104557154 + 439.217 NA intron (NM_013437, intron 1 of 6) L1PB1|LINE|L1 32411 NM_013437 29967 Hs.600630 NM_013437 ENSG00000147650 LRP12 MIG13A|ST7 LDL receptor related protein 12 protein-coding 193958-2 chr15 100170696 100171680 + 439.217 NA intron (NM_139057, intron 8 of 21) intron (NM_139057, intron 8 of 21) 170787 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding 216183-3 chr8 79125586 79126531 + 439.217 NA Intergenic Intergenic -206130 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 288302 chr16 73461100 73462323 + 439.217 NA Intergenic L1MD1|LINE|L1 74906 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 202830 chr1 115244461 115245407 + 439.217 NA Intergenic L1ME3D|LINE|L1 -38100 NR_157569 112840934 NR_157569 NGF-AS1 - NGF antisense RNA 1 ncRNA 195979-7 chr9 88865951 88866935 + 439.217 NA Intergenic Intergenic -120538 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA 197648-7 chr3 29121603 29122443 + 439.217 NA Intergenic Intergenic 158916 NR_109804 100873979 Hs.99391 NR_109804 RBMS3-AS3 - RBMS3 antisense RNA 3 ncRNA 209682 chr1 20423843 20424585 + 439.217 NA intron (NR_033887, intron 1 of 11) L1MB7|LINE|L1 4580 NR_033887 339505 Hs.633269 NR_033887 LINC01141 - long intergenic non-protein coding RNA 1141 ncRNA 241657-3 chr6 40199529 40200714 + 439.217 NA Intergenic L1MA9|LINE|L1 155885 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 178937-4 chr20 42019133 42019913 + 439.217 NA Intergenic L1ME3G|LINE|L1 -401146 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 196681-2 chr2 153752122 153752912 + 439.217 NA Intergenic L1M1|LINE|L1 -119405 NM_052917 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding 284437 chr3 60274059 60275267 + 439.217 NA intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) -193754 NR_135491 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding 187458-8 chr8 109950491 109951222 + 439.217 NA Intergenic MER75|DNA|PiggyBac 24915 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 195452 chr12 98038513 98039386 + 439.217 NA Intergenic L1MB8|LINE|L1 -43501 NR_036189 100422924 NR_036189 ENSG00000263890 MIR4303 - microRNA 4303 ncRNA 251056 chr8 118510531 118511441 + 439.217 NA intron (NM_001101676, intron 2 of 4) intron (NM_001101676, intron 2 of 4) -110015 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 319135 chr1 199494857 199496116 + 439.217 NA Intergenic L1M2|LINE|L1 346888 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA 290937 chr3 26940574 26941896 + 439.217 NA Intergenic Intergenic 246678 NM_001317811 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding 186667 chr12 34416681 34417554 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 394621 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 242975-4 chr3 87129976 87131248 + 439.217 NA intron (NR_104153, intron 1 of 2) L2b|LINE|L2 41332 NR_104153 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA 196857-4 chr9 28946814 28947748 + 439.217 NA intron (NM_001354574, intron 2 of 5) intron (NM_001354574, intron 2 of 5) -58326 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA 186316-4 chr2 109444485 109445549 + 439.217 NA intron (NM_001099289, intron 7 of 9) L1MEi|LINE|L1 -131392 NR_036224 100423027 NR_036224 ENSG00000265965 MIR4266 - microRNA 4266 ncRNA 179376-4 chr19 43852051 43852879 + 439.217 NA TTS (NM_181845) TTS (NM_181845) 25144 NM_001297752 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding 178146-4 chr17 19619776 19620621 + 439.217 NA Intergenic L1M4|LINE|L1 -27952 NM_001369138 224 Hs.499886 NM_000382 ENSG00000072210 ALDH3A2 ALDH10|FALDH|SLS aldehyde dehydrogenase 3 family member A2 protein-coding 198350-2 chr10 39141877 39142815 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 445750 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 216622 chr1 237240932 237242379 + 439.217 NA intron (NM_001035, intron 1 of 104) MER41B|LTR|ERV1 199471 NM_001035 6262 Hs.109514 NM_001035 ENSG00000198626 RYR2 ARVC2|ARVD2|RYR-2|RyR|VTSIP ryanodine receptor 2 protein-coding 236474-4 chr4 368233 369221 + 439.217 NA intron (NM_003441, intron 3 of 3) L1MB2|LINE|L1 18570 NR_030297 693156 NR_030297 ENSG00000207642 MIR571 MIRN571|hsa-mir-571 microRNA 571 ncRNA 217237 chr2 158521329 158522452 + 439.217 NA intron (NM_001005476, intron 1 of 20) intron (NM_001005476, intron 1 of 20) 64938 NM_003628 8502 Hs.407580 NM_003628 ENSG00000144283 PKP4 p0071 plakophilin 4 protein-coding 190357-6 chr5 141258625 141259562 + 439.217 NA Intergenic Intergenic 13698 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 187106-3 chr3 60985340 60986401 + 439.217 NA intron (NR_148922, intron 3 of 3) MLT1D|LTR|ERVL-MaLR 265582 NM_002012 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding 243150-2 chr14 66730261 66731582 + 439.217 NA intron (NM_001024218, intron 2 of 21) THE1D|LTR|ERVL-MaLR 223514 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 185525 chr1 34488072 34488818 + 439.217 NA Intergenic Intergenic 181249 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 195539-4 chr2 80906127 80907078 + 439.217 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 560344 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 210736-4 chr5 180938904 180939759 + 439.217 NA intron (NM_001159710, intron 2 of 6) L1MA4A|LINE|L1 29767 NM_001159710 79908 Hs.189109 NM_024850 ENSG00000113303 BTNL8 BTN9.2 butyrophilin like 8 protein-coding 231819-2 chr5 2349873 2350949 + 439.217 NA Intergenic HSMAR2|DNA|TcMar-Mariner -38210 NR_104616 100506858 Hs.445071 NR_104616 LOC100506858 - uncharacterized LOC100506858 ncRNA 193695-7 chr20 39217680 39218331 + 439.217 NA intron (NR_027124, intron 1 of 3) L1ME4a|LINE|L1 6743 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 404694 chr14 66206480 66208318 + 439.217 NA Intergenic THE1C|LTR|ERVL-MaLR -278972 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 180782-2 chr4 113477029 113478276 + 439.217 NA intron (NM_001221, intron 14 of 18) AluSx1|SINE|Alu 184813 NM_001354281 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding 231994-5 chr9 88864162 88865208 + 439.217 NA Intergenic L1MDa|LINE|L1 -118780 NR_036252 100423015 NR_036252 ENSG00000265873 MIR4289 - microRNA 4289 ncRNA 225406-6 chr7 118559683 118560949 + 439.217 NA Intergenic L1MB7|LINE|L1 335612 NM_019644 56311 Hs.729340 NM_019644 ENSG00000106013 ANKRD7 TSA806 ankyrin repeat domain 7 protein-coding 320716-2 chr10 58533488 58534850 + 439.217 NA intron (NM_001080512, intron 1 of 20) L1M4c|LINE|L1 21297 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 316412 chr2 64201201 64202635 + 439.217 NA intron (NR_033837, intron 2 of 5) MER94|DNA|hAT-Blackjack 3567 NR_033837 150992 Hs.272318 NR_033837 ENSG00000230923 LINC00309 NCRNA00309 long intergenic non-protein coding RNA 309 ncRNA 257117 chr2 6844141 6845241 + 439.217 NA intron (NM_001256478, intron 3 of 3) HUERS-P3-int|LTR|ERV1 -4227 NR_126359 104326052 Hs.7155 NR_126359 NRIR lncRNA-CMPK2 negative regulator of interferon response ncRNA 218730 chr3 127111253 127112316 + 439.217 NA Intergenic MER4D|LTR|ERV1 -81347 NM_001007534 285311 Hs.591284 NM_001007534 ENSG00000214324 C3orf56 - chromosome 3 open reading frame 56 protein-coding 244468-2 chr10 43487995 43488993 + 439.217 NA Intergenic Intergenic 51383 NM_001355450 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding 279518 chr15 36007233 36008704 + 439.217 NA Intergenic MER68|LTR|ERVL 81112 NR_039735 100616293 NR_039735 ENSG00000265098 MIR4510 mir-4510 microRNA 4510 ncRNA 272314-2 chr9 28158506 28159642 + 439.217 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 560231 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 178234-2 chr13 39924746 39925648 + 439.217 NA Intergenic L1MA5|LINE|L1 -256612 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA 336440 chr5 108500873 108502583 + 439.217 NA Intergenic MSTA|LTR|ERVL-MaLR -119630 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding 260192-3 chr5 59407042 59408161 + 439.217 NA intron (NM_001165899, intron 3 of 16) MSTB-int|LTR|ERVL-MaLR -50631 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 230764 chr14 35603917 35604856 + 439.217 NA intron (NM_014990, intron 35 of 40) L1M5|LINE|L1 70222 NM_032594 84684 Hs.62813 NM_032594 ENSG00000168348 INSM2 IA-6|IA6|mlt1 INSM transcriptional repressor 2 protein-coding 274247 chr8 138447752 138449199 + 439.217 NA intron (NM_001362965, intron 1 of 19) MLT2B4|LTR|ERVL 48786 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 338548-2 chr7 4348269 4349729 + 439.217 NA Intergenic AluJr4|SINE|Alu -214162 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 220750 chr1 13939370 13940400 + 439.217 NA Intergenic MSTA|LTR|ERVL-MaLR 190470 NM_001007257 7799 Hs.371823 NM_012231 ENSG00000116731 PRDM2 HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 PR/SET domain 2 protein-coding 194398 chr10 43627630 43628557 + 439.217 NA promoter-TSS (NR_038867) promoter-TSS (NR_038867) -724 NR_038867 414201 Hs.666576 NR_038867 ENSG00000223910 ZNF32-AS3 C10orf44|ZNF32-OT1|bA402L1.3 ZNF32 antisense RNA 3 ncRNA 233224-2 chr11 90481928 90483119 + 439.217 NA intron (NR_104190, intron 1 of 6) intron (NR_104190, intron 1 of 6) 73334 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA 204675-4 chr17 74624750 74625751 + 439.217 NA intron (NR_158152, intron 3 of 3) AluSz6|SINE|Alu -1512 NM_181449 342510 Hs.158954 NM_181449 ENSG00000186407 CD300E CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2 CD300e molecule protein-coding 190884-3 chr22 42011231 42011898 + 439.217 NA intron (NM_152613, intron 1 of 5) L1M4|LINE|L1 12776 NM_152613 164684 Hs.655541 NM_152613 ENSG00000183066 WBP2NL GRAMD7|PAWP WBP2 N-terminal like protein-coding 252023-3 chr8 53677243 53678239 + 439.217 NA Intergenic L1MB5|LINE|L1 -153776 NR_149032 100507516 Hs.597483 NR_149032 LOC100507516 - uncharacterized LOC100507516 ncRNA 185525-2 chr12 37909330 37910170 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -407024 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 219345 chr16 68546222 68547265 + 439.217 NA intron (NR_130976, intron 2 of 4) AluSz|SINE|Alu 7452 NM_001305203 146198 Hs.461074 NM_133458 ENSG00000184939 ZFP90 FIK|NK10|ZNF756|zfp-90 ZFP90 zinc finger protein protein-coding 193782-3 chr4 84330274 84331398 + 439.217 NA Intergenic L1MB8|LINE|L1 -31667 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA 192201-4 chr19 36722918 36723981 + 439.217 NA TTS (NM_001363651) TTS (NM_001363651) 19768 NM_001363651 163081 Hs.412517 NM_152603 ENSG00000189042 ZNF567 - zinc finger protein 567 protein-coding 183153-5 chr4 53090481 53091058 + 439.217 NA intron (NM_152540, intron 5 of 8) MIRb|SINE|MIR 228452 NM_023940 65997 Hs.8035 NM_023940 ENSG00000128045 RASL11B - RAS like family 11 member B protein-coding 196681-3 chr20 39361272 39362197 + 439.217 NA Intergenic L3|LINE|CR1 -136986 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 238495-2 chr11 71525012 71526126 + 439.217 NA Intergenic MSTB-int|LTR|ERVL-MaLR -1698 NM_001012503 440050 Hs.710675 NM_001012503 ENSG00000244411 KRTAP5-7 KRTAP5-3|KRTAP5.7 keratin associated protein 5-7 protein-coding 188600 chr1 36828158 36829021 + 439.217 NA intron (NM_000831, intron 10 of 15) Tigger3a|DNA|TcMar-Tigger 205926 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding 228832-3 chr7 68613757 68614827 + 439.217 NA Intergenic Intergenic 594039 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA 183417-5 chr2 180533349 180534361 + 439.217 NA Intergenic Intergenic -158249 NR_104320 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA 234893-2 chr5 37638688 37639553 + 439.217 NA intron (NM_001345998, intron 10 of 17) intron (NM_001345998, intron 10 of 17) 195702 NM_001278098 2668 Hs.248114 NM_000514 ENSG00000168621 GDNF ATF|ATF1|ATF2|HFB1-GDNF|HSCR3 glial cell derived neurotrophic factor protein-coding 188424 chr13 28832184 28833277 + 439.217 NA intron (NM_001366651, intron 1 of 14) L1MB7|LINE|L1 12391 NM_001366651 23281 Hs.22287 NM_015233 ENSG00000132938 MTUS2 CAZIP|ICIS|KIAA0774|TIP150 microtubule associated scaffold protein 2 protein-coding 211000-3 chr2 125880773 125881842 + 439.217 NA Intergenic Intergenic 236678 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 233224 chr10 39219418 39220223 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 523224 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 227075-4 chr7 50228936 50229748 + 439.217 NA Intergenic Intergenic -74722 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 218466 chr10 38575422 38576559 + 439.217 NA Intergenic (AATGG)n|Simple_repeat|Simple_repeat -120606 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 193607 chr1 12735393 12736370 + 439.217 NA Intergenic L2c|LINE|L2 -10319 NM_001330361 93190 Hs.98095 NM_152290 ENSG00000157330 C1orf158 - chromosome 1 open reading frame 158 protein-coding 214338-4 chr20 58454455 58455517 + 439.217 NA Intergenic Tigger4a|DNA|TcMar-Tigger 59952 NR_130908 164284 Hs.119286 NM_153360 ENSG00000198768 APCDD1L - APC down-regulated 1 like protein-coding 197033-2 chr11 81831871 81832870 + 439.217 NA Intergenic L1MA4A|LINE|L1 58466 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 237880-5 chr8 114874312 114875439 + 439.217 NA Intergenic AluY|SINE|Alu 793138 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 196769-3 chr5 150888154 150889201 + 439.217 NA intron (NM_001346557, intron 3 of 3) L1PREC2|LINE|L1 16306 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 185789-2 chr11 112639195 112640328 + 439.217 NA Intergenic L1ME1|LINE|L1 -83959 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 242711-9 chr7 64710312 64711432 + 439.217 NA 3' UTR (NM_001282359, exon 4 of 4) 3' UTR (NM_001282359, exon 4 of 4) 31808 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 187721-8 chr6 27400486 27401435 + 439.217 NA exon (NM_001322289, exon 4 of 4) exon (NM_001322289, exon 4 of 4) 12242 NM_001076781 346157 Hs.651176 NM_001013719 ENSG00000124613 ZNF391 dJ153G14.3 zinc finger protein 391 protein-coding 190796-7 chr5 178935156 178936023 + 439.217 NA Intergenic MLT1J|LTR|ERVL-MaLR -5609 NM_001323307 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 177883-8 chr3 191154907 191155795 + 439.217 NA Intergenic L1M3c|LINE|L1 -43890 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding 219521-5 chr9 26806960 26807727 + 439.217 NA Intergenic Intergenic 85459 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 183505-8 chr5 46272883 46273854 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -576988 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 192465-4 chr17 61620695 61621288 + 439.217 NA Intergenic L1MC|LINE|L1 -29772 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 239637-5 chr2 58826064 58827228 + 439.217 NA intron (NR_033873, intron 2 of 13) L1M1|LINE|L1 305893 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA 330291-2 chr19 37447024 37448494 + 439.217 NA intron (NM_152484, intron 2 of 5) L1MCc|LINE|L1 19685 NM_001330482 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding 203972-8 chr8 87946050 87946879 + 439.217 NA Intergenic Intergenic -72449 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 286809-3 chr12 37981345 37982546 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -334829 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 238319-3 chr8 78383370 78384651 + 439.217 NA Intergenic THE1B|LTR|ERVL-MaLR -132330 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding 217676 chr19 24350938 24352039 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -188041 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 314743-3 chr5 26855629 26856982 + 439.217 NA Intergenic MSTB-int|LTR|ERVL-MaLR 182281 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 187458-5 chr18 65639946 65640851 + 439.217 NA Intergenic L1ME3A|LINE|L1 -109854 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding 211966-4 chr5 8033579 8034487 + 439.217 NA Intergenic Intergenic 164885 NR_134482 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding 186140-5 chr2 39700520 39701291 + 439.217 NA intron (NM_152390, intron 1 of 3) L1M4|LINE|L1 34988 NM_152390 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding 196681 chr17 59409238 59410249 + 439.217 NA Intergenic L2c|LINE|L2 43660 NR_039882 100616204 NR_039882 ENSG00000263857 MIR4729 - microRNA 4729 ncRNA 178498-5 chr2 115369633 115370841 + 439.217 NA intron (NM_001321912, intron 4 of 25) intron (NM_001321912, intron 4 of 25) 26422 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 224967-7 chr9 91170441 91171324 + 439.217 NA intron (NR_135306, intron 2 of 2) L1ME2|LINE|L1 51820 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA 179991-5 chr19 56416323 56416990 + 439.217 NA intron (NM_001159860, intron 4 of 4) L1M5|LINE|L1 12324 NM_152478 147949 Hs.146854 NM_152478 ENSG00000198440 ZNF583 - zinc finger protein 583 protein-coding 288829-2 chr2 112997420 112998869 + 439.217 NA Intergenic Intergenic -7315 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding 179903 chr2 52326254 52327026 + 439.217 NA intron (NR_135237, intron 8 of 10) L1M2c|LINE|L1 -44008 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 180342-4 chr5 15175820 15176606 + 439.217 NA Intergenic L1M1|LINE|L1 90347 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA 188248-2 chr14 75398423 75399087 + 439.217 NA Intergenic Intergenic -28969 NM_001135047 122953 Hs.196482 NM_130469 ENSG00000140044 JDP2 JUNDM2 Jun dimerization protein 2 protein-coding 278375 chr14 78514146 78515264 + 439.217 NA intron (NM_004796, intron 1 of 16) L2a|LINE|L2 110986 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 373949 chr10 43955009 43956509 + 439.217 NA intron (NR_136147, intron 4 of 4) intron (NR_136147, intron 4 of 4) 43357 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 235947-3 chr6 40039422 40040693 + 439.217 NA Intergenic Intergenic -105595 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 193782 chr10 76501240 76501945 + 439.217 NA intron (NM_001305581, intron 6 of 6) L1PA16|LINE|L1 -386452 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 198965-3 chr2 31198345 31199036 + 439.217 NA intron (NM_001145122, intron 7 of 21) intron (NM_001145122, intron 7 of 21) 18825 NM_001145122 440854 Hs.468059 NM_001145122 ENSG00000214711 CAPN14 - calpain 14 protein-coding 282943 chr1 96870382 96871574 + 439.217 NA Intergenic L1PA17|LINE|L1 148340 NR_125356 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding 194573-4 chr5 131247300 131248171 + 439.217 NA Intergenic AluJr|SINE|Alu -16274 NM_001038702 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding 220136-2 chr16 35442897 35443967 + 439.217 NA Intergenic Tigger1|DNA|TcMar-Tigger 37164 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 186755-2 chr20 40297030 40297715 + 439.217 NA Intergenic L1ME3C|LINE|L1 292911 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 191674-3 chr17 33447283 33448187 + 439.217 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) 86025 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo 238583 chr7 53837681 53839000 + 439.217 NA Intergenic L1MB2|LINE|L1 -26409 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 190181-2 chr16 52371694 52372364 + 439.217 NA Intergenic Intergenic 113465 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA 258962 chr7 25961271 25962452 + 439.217 NA Intergenic Intergenic -11875 NR_029597 406940 NR_029597 ENSG00000199085 MIR148A MIRN148|MIRN148A|hsa-mir-148|mir-148a microRNA 148a ncRNA 186052-2 chr10 71935148 71935942 + 439.217 NA Intergenic AluJo|SINE|Alu -28850 NM_004273 9469 Hs.158304 NM_004273 ENSG00000122863 CHST3 C6ST|C6ST1|HSD carbohydrate sulfotransferase 3 protein-coding 190708-7 chr15 97470444 97471288 + 439.217 NA intron (NR_120324, intron 2 of 4) L1ME4c|LINE|L1 50945 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA 185349 chr16 24378968 24379785 + 439.217 NA Intergenic MER34A|LTR|ERV1 123823 NM_006539 10368 Hs.7235 NM_006539 ENSG00000006116 CACNG3 - calcium voltage-gated channel auxiliary subunit gamma 3 protein-coding 202391-6 chr5 1717623 1718466 + 439.217 NA Intergenic L1MEc|LINE|L1 -9176 NR_036240 100422966 NR_036240 ENSG00000263746 MIR4277 - microRNA 4277 ncRNA 310966 chr11 54794602 54796314 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 88626 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 187809-2 chr1 82496408 82497325 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR -406317 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA 269240-2 chr5 45948148 45949185 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -252286 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 221805-2 chr5 135618310 135619405 + 439.217 NA intron (NM_001349335, intron 1 of 10) L1MA4A|LINE|L1 35078 NR_027127 340074 Hs.434633 NR_027127 ENSG00000251045 SLC25A48-AS1 LINC01959 SLC25A48 antisense RNA 1 ncRNA 232346 chr16 47836160 47837621 + 439.217 NA Intergenic AluJb|SINE|Alu -21691 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA 232873-3 chr20 62072331 62073709 + 439.217 NA Intergenic MLT2A2|LTR|ERVL -7210 NM_003185 6874 Hs.18857 NM_003185 ENSG00000130699 TAF4 TAF2C|TAF2C1|TAF4A|TAFII130|TAFII135 TATA-box binding protein associated factor 4 protein-coding 202391-5 chr3 96291580 96292738 + 439.217 NA Intergenic Intergenic -67805 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA 246664-4 chr12 249799 250911 + 439.217 NA intron (NM_016615, intron 2 of 14) L1ME2z|LINE|L1 6944 NR_120482 102723544 Hs.669733 NR_120482 ENSG00000255746 LOC102723544 - uncharacterized LOC102723544 ncRNA 207047-6 chr2 119611112 119611819 + 439.217 NA intron (NR_073132, intron 13 of 24) intron (NR_073132, intron 13 of 24) 67016 NR_073132 200373 Hs.496753 NM_001029996 ENSG00000163075 CFAP221 FAP221|PCDP1 cilia and flagella associated protein 221 protein-coding 182363 chr10 5163640 5164449 + 439.217 NA intron (NR_027916, intron 1 of 7) LTR25|LTR|ERV1 21143 NR_027916 340811 Hs.282513 NM_001007536 ENSG00000264006 AKR1C8P AKR1CL1 aldo-keto reductase family 1 member C8, pseudogene pseudo 262476 chr22 34726169 34727557 + 439.217 NA Intergenic L1MA10|LINE|L1 271053 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 210473 chr13 63606921 63608019 + 439.217 NA Intergenic L1M2|LINE|L1 -129965 NR_002171 283491 Hs.363054 NR_002171 OR7E156P - olfactory receptor family 7 subfamily E member 156 pseudogene pseudo 226109-3 chr5 154667512 154668741 + 439.217 NA Intergenic AluSp|SINE|Alu -14853 NM_001367713 23367 Hs.292078 NM_015315 ENSG00000155506 LARP1 LARP La ribonucleoprotein domain family member 1 protein-coding 352428 chr12 34652545 34653864 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 630708 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 226460 chr11 79163579 79164568 + 439.217 NA intron (NM_001098816, intron 3 of 33) (TA)n|Simple_repeat|Simple_repeat 238036 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA 206256 chr1 73243841 73244610 + 439.217 NA Intergenic L1PA16|LINE|L1 -61945 NR_110676 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA 201601-3 chr3 63362091 63362888 + 439.217 NA intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) -80823 NM_144642 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding 196066-4 chr7 26570529 26571193 + 439.217 NA Intergenic MSTA|LTR|ERVL-MaLR -32036 NR_022006 9808 Hs.69749 NM_014769 ENSG00000122548 KIAA0087 - KIAA0087 lncRNA ncRNA 216534 chr12 20167162 20168177 + 439.217 NA Intergenic Charlie1|DNA|hAT-Charlie -39768 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA 186316-2 chr12 126133726 126134596 + 439.217 NA Intergenic L1PA15|LINE|L1 38169 NR_110053 101927464 Hs.443932 NR_110053 ENSG00000284848 LINC02359 - long intergenic non-protein coding RNA 2359 ncRNA 181572 chr12 14342179 14343330 + 439.217 NA Intergenic Intergenic -22878 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 439744 chr5 46015726 46017976 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -320471 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 215216-2 chr10 75669290 75670175 + 439.217 NA intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) 22223 NR_131178 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 232433 chr13 24131493 24132488 + 439.217 NA intron (NM_001286792, intron 3 of 14) LTR67B|LTR|ERVL -28730 NM_153023 221178 Hs.434298 NM_153023 ENSG00000182957 SPATA13 ARHGEF29|ASEF2 spermatogenesis associated 13 protein-coding 177619-7 chr7 7152919 7153808 + 439.217 NA Intergenic AluSz|SINE|Alu -29252 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding 179815-6 chr5 4715709 4716425 + 439.217 NA Intergenic Intergenic -57414 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 181836-3 chr2 123903038 123903966 + 439.217 NA Intergenic L1ME5|LINE|L1 121672 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 222595-2 chr5 82899989 82901028 + 439.217 NA Intergenic Intergenic -40672 NR_105016 102546175 NR_105016 ENSG00000281327 LINC01338 - long intergenic non-protein coding RNA 1338 ncRNA 212845 chr14 66573887 66574843 + 439.217 NA intron (NM_001024218, intron 1 of 21) L1MA8|LINE|L1 66958 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 233400 chr16 80393909 80395053 + 439.217 NA intron (NR_120307, intron 2 of 5) intron (NR_120307, intron 2 of 5) -146253 NM_001305017 83657 Hs.98849 NM_130897 ENSG00000168589 DYNLRB2 DNCL2B|DNLC2B|ROBLD2 dynein light chain roadblock-type 2 protein-coding 208716-3 chr10 39237260 39238208 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 541138 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 188951-3 chr14 62439215 62440179 + 439.217 NA Intergenic L1M2a|LINE|L1 -299724 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 226812-4 chr7 111342573 111343533 + 439.217 NA intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 219238 NM_032549 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding 198789-2 chr14 69515968 69516705 + 439.217 NA intron (NM_001161498, intron 6 of 12) L1ME4a|LINE|L1 31608 NM_001161498 400224 Hs.509796 NM_001161498 ENSG00000175985 PLEKHD1 UPF0639 pleckstrin homology and coiled-coil domain containing D1 protein-coding 202128-5 chr6 40126319 40127041 + 439.217 NA Intergenic Intergenic -192218 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 335825 chr8 123585039 123586339 + 439.217 NA Intergenic MER63A|DNA|hAT-Blackjack -44483 NM_001242463 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding 222068-3 chr17 62977487 62978535 + 439.217 NA intron (NM_025185, intron 1 of 25) L1ME3G|LINE|L1 11776 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 191059-7 chr8 138579715 138580471 + 439.217 NA Intergenic MER96B|DNA|hAT-Tip100 -82363 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 313777 chr9 35192068 35193310 + 439.217 NA intron (NM_006377, intron 1 of 38) HUERS-P3b-int|LTR|ERV1 30680 NM_001371186 196506 chr5 13628326 13629118 + 439.217 NA Intergenic Intergenic 315758 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 182011-5 chr8 130933066 130934011 + 439.217 NA intron (NM_001115, intron 5 of 17) intron (NM_001115, intron 5 of 17) 107371 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 242799 chr8 123870049 123871262 + 439.217 NA intron (NM_001039112, intron 1 of 40) L1MC3|LINE|L1 18668 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding 186931-5 chr5 26263128 26263857 + 439.217 NA Intergenic L1PA16|LINE|L1 775094 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 229447-2 chr18 2191251 2192080 + 439.217 NA Intergenic L2a|LINE|L2 379840 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 255712-2 chr7 46295834 46296992 + 439.217 NA Intergenic L1MA9|LINE|L1 -375141 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 209155 chr18 55936060 55936874 + 439.217 NA Intergenic L1M5|LINE|L1 -16268 NR_110755 101927273 Hs.434335 NR_110755 ENSG00000260930 LINC01416 - long intergenic non-protein coding RNA 1416 ncRNA 270821 chr8 126605668 126607138 + 439.217 NA Intergenic Intergenic -47925 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 322034 chr14 66946431 66948093 + 439.217 NA intron (NM_020806, intron 8 of 22) L2c|LINE|L2 -242178 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 205027 chr6 55734412 55735628 + 439.217 NA Intergenic Intergenic 140570 NM_001329754 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding 189566-4 chr4 54160139 54160897 + 439.217 NA Intergenic MSTD|LTR|ERVL-MaLR 60355 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding 186140-10 chr8 135309081 135310090 + 439.217 NA Intergenic Intergenic 75454 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 350759 chr9 37367545 37369180 + 439.217 NA Intergenic AluY|SINE|Alu -54334 NM_012203 9380 Hs.155742 NM_012203 ENSG00000137106 GRHPR GLXR|GLYD|PH2 glyoxylate and hydroxypyruvate reductase protein-coding 215128-5 chr2 75448396 75449298 + 439.217 NA Intergenic L1MEf|LINE|L1 -75221 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA 215216-4 chr19 44439155 44440135 + 439.217 NA intron (NM_001278510, intron 4 of 5) AluSx|SINE|Alu 8827 NR_103551 7772 Hs.709348 NM_014518 ENSG00000278318 ZNF229 - zinc finger protein 229 protein-coding 242184-2 chr2 46725106 46726401 + 439.217 NA intron (NM_144949, intron 1 of 1) L1MEf|LINE|L1 26458 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding 236826-4 chr7 4851985 4853363 + 439.217 NA intron (NM_018059, intron 2 of 14) AluSx|SINE|Alu 9356 NM_020144 56903 Hs.487409 NM_020144 ENSG00000218823 PAPOLB PAPT|TPAP poly(A) polymerase beta protein-coding 264848-3 chr7 136624602 136625873 + 439.217 NA Intergenic L1MC5a|LINE|L1 -243415 NM_001006630 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding 180167-3 chr17 77031338 77032033 + 439.217 NA Intergenic MLT1F|LTR|ERVL-MaLR -56958 NR_027058 654434 Hs.720923 NR_027058 ENSG00000234912 SNHG20 C17orf86|LINC00338|NCRNA00338|SCARNA16HG small nucleolar RNA host gene 20 ncRNA 197208 chr11 69146052 69146907 + 439.217 NA TTS (NR_104161) TTS (NR_104161) -9456 NR_161183 107984345 NM_001369201 SMIM38 - small integral membrane protein 38 protein-coding 265199 chr10 18743774 18745195 + 439.217 NA Intergenic Intergenic 85053 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding 181836-4 chr2 132467509 132468294 + 439.217 NA intron (NM_001508, intron 1 of 1) intron (NM_001508, intron 1 of 1) 34190 NR_162099 113218485 NR_162099 MIR9986 - microRNA 9986 ncRNA 242711-8 chr7 1634845 1636024 + 439.217 NA Intergenic MLT1F|LTR|ERVL-MaLR 20964 NR_001288 260341 Hs.534596 NR_001288 TFAMP1 MTTF1|TCF6L1 transcription factor A, mitochondrial pseudogene 1 pseudo 178498-4 chr19 56429954 56430764 + 439.217 NA Intergenic Intergenic 26027 NM_152478 147949 Hs.146854 NM_152478 ENSG00000198440 ZNF583 - zinc finger protein 583 protein-coding 230765-2 chr2 160778246 160779269 + 439.217 NA Intergenic L1PA15|LINE|L1 -284950 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding 326953 chr9 35860869 35862614 + 439.217 NA 3' UTR (NM_001042590, exon 13 of 13) 3' UTR (NM_001042590, exon 13 of 13) 8660 NM_001004487 392309 Hs.527480 NM_001004487 ENSG00000168828 OR13J1 OR9-2 olfactory receptor family 13 subfamily J member 1 protein-coding 325196 chr22 19315479 19317043 + 439.217 NA Intergenic LTR76|LTR|ERV1 -24542 NM_007098 8218 Hs.368266 NM_001835 ENSG00000070371 CLTCL1 CHC22|CLH22|CLTCL|CLTD clathrin heavy chain like 1 protein-coding 185613 chr8 131610139 131611078 + 439.217 NA Intergenic Intergenic -293485 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 192465-9 chr6 67814742 67815482 + 439.217 NA Intergenic L1MC3|LINE|L1 -240239 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 183153-2 chr11 44643791 44644635 + 439.217 NA Intergenic L1ME1|LINE|L1 78550 NM_002231 3732 Hs.527778 NM_002231 ENSG00000085117 CD82 4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27 CD82 molecule protein-coding 216534-3 chr14 88103689 88104568 + 439.217 NA Intergenic Intergenic -77816 NR_110121 101928791 Hs.641889 NR_110121 ENSG00000258826 LINC01147 - long intergenic non-protein coding RNA 1147 ncRNA 273896-2 chr7 11301810 11302750 + 439.217 NA Intergenic L1MEg|LINE|L1 328408 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding 187194-5 chr8 83941008 83941646 + 439.217 NA Intergenic L1MA9|LINE|L1 -241460 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 235859 chr17 64437604 64438738 + 439.217 NA Intergenic THE1D-int|LTR|ERVL-MaLR -10944 NM_001369493 284021 Hs.631749 NM_001085423 ENSG00000271605 MILR1 Allergin-1|C17orf60|MCA-32|MCA32 mast cell immunoglobulin like receptor 1 protein-coding 254746 chr1 58139876 58141121 + 439.217 NA intron (NM_001353980, intron 1 of 5) intron (NM_001353980, intron 1 of 5) 110005 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 549021 chr12 37879082 37881902 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -436282 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 188688-4 chr3 110286866 110287804 + 439.217 NA Intergenic L1M4|LINE|L1 684507 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA 249387-2 chr5 32924607 32925873 + 439.217 NA Intergenic Intergenic -22203 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 320365-3 chr8 131619804 131620928 + 439.217 NA Intergenic L1PA16|LINE|L1 -283727 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 193695-2 chr10 86275636 86276459 + 439.217 NA intron (NM_017551, intron 2 of 15) L1M4|LINE|L1 -11259 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA 219608 chr5 45955853 45957019 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -260056 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 178146 chr10 99309063 99309843 + 439.217 NA Intergenic L1M5|LINE|L1 -19646 NM_001345889 26507 Hs.274579 NM_020348 ENSG00000119946 CNNM1 ACDP1|CLP-1 cyclin and CBS domain divalent metal cation transport mediator 1 protein-coding 217149-3 chr12 37912825 37913670 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -403527 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 261510 chr1 115588990 115590114 + 439.217 NA Intergenic MER61-int|LTR|ERV1 -52418 NM_138959 81839 Hs.515130 NM_138959 ENSG00000173218 VANGL1 KITENIN|LPP2|STB2|STBM2 VANGL planar cell polarity protein 1 protein-coding 231379-3 chr14 71257173 71258064 + 439.217 NA Intergenic Intergenic -62858 NM_001354286 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 227251-4 chr8 137387741 137388605 + 439.217 NA Intergenic THE1B-int|LTR|ERVL-MaLR 25415 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 186052-3 chr12 118653790 118654605 + 439.217 NA Intergenic MIRb|SINE|MIR 107482 NR_134999 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA 200634-3 chr18 65022586 65023489 + 439.217 NA Intergenic Intergenic -727215 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding 313601 chr8 142972267 142973703 + 439.217 NA Intergenic Intergenic -22843 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo 205378-13 chr8 126662717 126663598 + 439.217 NA Intergenic L1MC1|LINE|L1 -104679 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 197472 chr10 23949873 23950794 + 439.217 NA intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) 255606 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 182802-6 chr9 126139920 126140785 + 439.217 NA Intergenic L1MEd|LINE|L1 135563 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA 216095-5 chr3 44594082 44595014 + 439.217 NA exon (NM_173658, exon 3 of 3) exon (NM_173658, exon 3 of 3) 9584 NR_147691 110354863 Hs.157035 NM_001351732 ZNF660-ZNF197 - ZNF660-ZNF197 readthrough protein-coding 178761-2 chr10 60145121 60146145 + 439.217 NA intron (NM_001204403, intron 24 of 43) MIRb|SINE|MIR -4617 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding 208804-4 chr17 12329324 12330111 + 439.217 NA Intergenic Intergenic -220251 NR_034145 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA 277322 chr19 36548730 36549871 + 439.217 NA 5' UTR (NM_001352272, exon 6 of 7) 5' UTR (NM_001352272, exon 6 of 7) -21029 NM_001166037 339324 Hs.18103 NM_001012756 ENSG00000254004 ZNF260 OZRF1|PEX1|ZFP260 zinc finger protein 260 protein-coding 302357-2 chr11 70514022 70515375 + 439.217 NA intron (NM_133266, intron 2 of 10) L1MEf|LINE|L1 116169 NM_001184740 2017 Hs.596164 NM_005231 ENSG00000085733 CTTN EMS1 cortactin protein-coding 368766 chr2 57931835 57933608 + 439.217 NA intron (NM_001288838, intron 1 of 15) L1MA9|LINE|L1 25070 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 244819-4 chr9 113041482 113042508 + 439.217 NA 3' UTR (NM_001282515, exon 4 of 4) 3' UTR (NM_001282515, exon 4 of 4) 14729 NM_001282515 7539 Hs.150406 NM_003408 ENSG00000136866 ZFP37 ZNF906|zfp-37 ZFP37 zinc finger protein protein-coding 200195-3 chr15 81243195 81244257 + 439.217 NA intron (NM_001352686, intron 2 of 18) L1MD1|LINE|L1 44250 NM_001352686 3603 Hs.459095 NM_004513 ENSG00000172349 IL16 LCF|NIL16|PRIL16|prIL-16 interleukin 16 protein-coding 468293 chr14 71792637 71794392 + 439.217 NA Intergenic L1MB8|LINE|L1 -138657 NM_001370289 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 229095 chr6 165463891 165465026 + 439.217 NA intron (NM_006661, intron 4 of 22) L1MC4|LINE|L1 -154853 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding 318257 chr2 129408388 129409978 + 439.217 NA Intergenic MLT1B|LTR|ERVL-MaLR -135292 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA 193343-3 chr20 37458225 37459128 + 439.217 NA Intergenic MLT1F1-int|LTR|ERVL-MaLR 61627 NM_001317075 10904 Hs.472651 NM_006698 ENSG00000166619 BLCAP BC10 BLCAP apoptosis inducing factor protein-coding 252550 chr4 46632194 46633169 + 439.217 NA Intergenic L1PA15|LINE|L1 -242553 NM_000807 2555 Hs.48372 NM_000807 ENSG00000151834 GABRA2 - gamma-aminobutyric acid type A receptor alpha2 subunit protein-coding 279693-2 chr4 124911351 124912759 + 439.217 NA Intergenic L1MA9|LINE|L1 -199323 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding 201425 chr10 25093797 25094444 + 439.217 NA Intergenic L1MA2|LINE|L1 -18938 NR_120649 101929025 Hs.553324 NR_120649 ENSG00000231422 LINC01516 - long intergenic non-protein coding RNA 1516 ncRNA 235596-2 chr17 58862149 58863055 + 439.217 NA intron (NM_014906, intron 1 of 6) ERV24_Prim-int|LTR|ERV1 106733 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding 396261 chr22 34889196 34891333 + 439.217 NA intron (NR_138042, intron 3 of 4) THE1D-int|LTR|ERVL-MaLR 107652 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 215216-5 chr8 131575292 131576424 + 439.217 NA Intergenic L1PREC2|LINE|L1 -328235 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 177531 chr11 40442204 40442968 + 439.217 NA intron (NM_020929, intron 2 of 4) L2c|LINE|L2 -149456 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 526709 chr17 70836310 70838684 + 439.217 NA Intergenic L2a|LINE|L2 364682 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 230677-3 chr18 14049352 14050413 + 439.217 NA Intergenic L1PA16|LINE|L1 82553 NM_145287 162655 Hs.352635 NM_145287 ENSG00000175322 ZNF519 HsT2362 zinc finger protein 519 protein-coding 189830-4 chr2 128907356 128908205 + 439.217 NA Intergenic L1ME1|LINE|L1 43180 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 193607-6 chr2 67029380 67030194 + 439.217 NA Intergenic L1MD|LINE|L1 -56659 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA 193695-10 chr5 150855246 150856145 + 439.217 NA intron (NM_001346557, intron 2 of 3) intron (NM_001346557, intron 2 of 3) 9172 NM_001145805 345611 Hs.519680 NM_001145805 ENSG00000237693 IRGM IFI1|IRGM1|LRG-47|LRG47 immunity related GTPase M protein-coding 193343-2 chr20 11255575 11256419 + 439.217 NA Intergenic Intergenic 17386 NR_038972 339593 Hs.434320 NR_038972 LOC339593 - uncharacterized LOC339593 ncRNA 205641-3 chr7 113517969 113518711 + 439.217 NA Intergenic L1PA5|LINE|L1 -399758 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding 311229 chr9 35142102 35143736 + 439.217 NA Intergenic LTR19-int|LTR|ERV1 -19090 NM_001371189 207310-4 chr3 20821576 20822435 + 439.217 NA Intergenic Intergenic 479537 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA 189390-3 chr5 142344798 142345706 + 439.217 NA intron (NR_120664, intron 1 of 3) AluSx|SINE|Alu 19959 NR_120664 101926941 Hs.658945 NR_120664 ENSG00000231185 SPRY4-AS1 THCAT68 SPRY4 antisense RNA 1 ncRNA 270645 chr2 186783467 186784378 + 439.217 NA Intergenic L1M3f|LINE|L1 65248 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding 251144-2 chr19 37538625 37539538 + 439.217 NA 3' UTR (NM_001013659, exon 8 of 8) 3' UTR (NM_001013659, exon 8 of 8) -9868 NR_038248 100507433 Hs.121283 NR_038247 ENSG00000267470 ZNF571-AS1 - ZNF571 antisense RNA 1 ncRNA 411019 chr4 37204893 37206631 + 439.217 NA Intergenic Intergenic 36229 NR_039965 100616435 NR_039965 ENSG00000264319 MIR4801 - microRNA 4801 ncRNA 248246 chr10 88173526 88174911 + 439.217 NA Intergenic L1MA5|LINE|L1 310593 NM_001304718 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding 267571-3 chr8 85488104 85489227 + 439.217 NA Intergenic L1PB1|LINE|L1 -23750 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA 183417-7 chr8 138562219 138563186 + 439.217 NA Intergenic MLT1E3|LTR|ERVL-MaLR -64972 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 197472-2 chr10 82412161 82412883 + 439.217 NA intron (NR_163253, intron 3 of 10) Tigger1|DNA|TcMar-Tigger -179602 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 206871 chr11 47651540 47652351 + 439.217 NA Intergenic MER21C|LTR|ERVL -9291 NM_001317232 23788 Hs.269944 NM_014342 ENSG00000109919 MTCH2 HSPC032|MIMP|SLC25A50 mitochondrial carrier 2 protein-coding 390727 chr10 10183981 10185582 + 439.217 NA Intergenic Intergenic 126059 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA 252286-4 chr8 144934169 144935388 + 439.217 NA intron (NM_006958, intron 2 of 2) MER58C|DNA|hAT-Charlie 16102 NM_001029976 7564 Hs.493225 NM_006958 ENSG00000170631 ZNF16 HZF1|KOX9 zinc finger protein 16 protein-coding 244380-3 chr7 20853978 20854935 + 439.217 NA intron (NR_126381, intron 1 of 5) intron (NR_126381, intron 1 of 5) 19025 NR_126381 104355138 Hs.650722 NR_126381 ENSG00000232790 LINC01162 - long intergenic non-protein coding RNA 1162 ncRNA 181836-5 chr4 61001065 61002110 + 439.217 NA Intergenic L1M4|LINE|L1 78968 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 241745 chr5 46020930 46022091 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -325130 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 261685-2 chr3 45300608 45301795 + 439.217 NA Intergenic L1M4b|LINE|L1 -74914 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding 189215-3 chr17 33361535 33362326 + 439.217 NA intron (NM_001094, intron 1 of 9) intron (NM_001094, intron 1 of 9) -68942 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding 203270 chr16 79862067 79863064 + 439.217 NA Intergenic Intergenic 67316 NR_104661 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA 556224 chr7 55937946 55940954 + 439.217 NA exon (NM_001366796, exon 7 of 7) exon (NM_001366796, exon 7 of 7) -12427 NM_015969 51373 Hs.44298 NM_015969 ENSG00000239789 MRPS17 HSPC011|MRP-S17|RPMS17|S17mt mitochondrial ribosomal protein S17 protein-coding 188951-6 chr5 46252236 46253194 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -556335 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 356293 chr1 220948042 220949394 + 439.217 NA Intergenic L1ME3A|LINE|L1 -68578 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA 282680 chr12 34587674 34589378 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 566030 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 215304-4 chr3 19594975 19595805 + 439.217 NA Intergenic Intergenic -280459 NR_039954 100616291 NR_039954 ENSG00000271898 MIR4791 mir-4791 microRNA 4791 ncRNA 187809-10 chr4 31324191 31325178 + 439.217 NA Intergenic Intergenic 153540 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 231292-4 chr6 127371380 127372539 + 439.217 NA Intergenic L1MA6|LINE|L1 -28350 NM_001105545 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding 215919-6 chr9 133597006 133598039 + 439.217 NA Intergenic L1MEc|LINE|L1 -17276 NM_001080515 642968 Hs.173134 NM_001080515 ENSG00000196990 FAM163B C9orf166 family with sequence similarity 163 member B protein-coding 219960 chr16 8344094 8345184 + 439.217 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 245199 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 272490 chr10 82108202 82109528 + 439.217 NA intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 124055 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 230677-5 chr7 64401509 64402693 + 439.217 NA Intergenic MLT2A1|LTR|ERVL -31592 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo 257733 chr16 73445274 73446465 + 439.217 NA Intergenic LTR16C|LTR|ERVL 59064 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 187721-3 chr14 60609904 60610656 + 439.217 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -28936 NR_126480 104548971 NR_126480 SALRNA1 SAL-RNA1|XLOC_023166 senescence associated long non-coding RNA 1 ncRNA 195451-4 chr4 439896 440762 + 439.217 NA 3' UTR (NM_133474, exon 3 of 3) 3' UTR (NM_133474, exon 3 of 3) 33880 NR_002451 79963 Hs.677493 NM_024903 ENSG00000251595 ABCA11P ABCA11|EST1133530 ATP binding cassette subfamily A member 11, pseudogene pseudo 262827-2 chr5 169639335 169640484 + 439.217 NA intron (NR_156756, intron 1 of 52) MLT1B|LTR|ERVL-MaLR 2634 NR_156756 1794 Hs.586174 NM_004946 ENSG00000134516 DOCK2 IMD40 dedicator of cytokinesis 2 protein-coding 244907 chr14 49024405 49025542 + 439.217 NA Intergenic Intergenic 561407 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 180342-5 chr5 158666710 158667634 + 439.217 NA Intergenic L2|LINE|L2 -257399 NR_109888 101927697 Hs.483960 NR_109888 ENSG00000276778 LINC02227 - long intergenic non-protein coding RNA 2227 ncRNA 420770-2 chr4 32289670 32291400 + 439.217 NA Intergenic LOR1b|LTR|ERV1 -60503 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 286984 chr18 4889779 4891264 + 439.217 NA Intergenic Intergenic -190661 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 205553 chr10 102184760 102185698 + 439.217 NA Intergenic LOR1b|LTR|ERV1 32840 NM_004741 9221 Hs.523238 NM_004741 ENSG00000166197 NOLC1 NOPP130|NOPP140|NS5ATP13|P130 nucleolar and coiled-body phosphoprotein 1 protein-coding 195627-8 chr5 117266605 117267690 + 439.217 NA Intergenic L1M5|LINE|L1 -148365 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA 187721-5 chr19 52061991 52062850 + 439.217 NA intron (NM_001369829, intron 7 of 7) intron (NM_001369829, intron 7 of 7) -13582 NM_014650 9668 Hs.655934 NM_014650 ENSG00000256087 ZNF432 - zinc finger protein 432 protein-coding 218993-2 chrUn_GL000216v2 61015 62021 + 439.217 NA NA (TTCCATTCCA)n|Simple_repeat|Simple_repeat NA NA 240691-2 chr2 47578100 47579092 + 439.217 NA Intergenic L1ME4a|LINE|L1 -8265 NM_022055 56660 Hs.591586 NM_022055 ENSG00000184261 KCNK12 K2p12.1|THIK-2|THIK2 potassium two pore domain channel subfamily K member 12 protein-coding 188336 chr12 14351719 14352644 + 439.217 NA Intergenic THE1C-int|LTR|ERVL-MaLR -13451 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 286721-4 chr8 127554228 127555236 + 439.217 NA Intergenic MER44B|DNA|TcMar-Tigger -72593 NR_117100 727677 Hs.673248 NR_024393 ENSG00000246228 CASC8 CARLO1|CARLo-1|LINC00860 cancer susceptibility 8 ncRNA 189917-5 chr5 129789380 129790381 + 439.217 NA Intergenic L1M1|LINE|L1 41786 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding 358050 chr2 129258177 129259661 + 439.217 NA intron (NR_122042, intron 1 of 3) L1ME4a|LINE|L1 14972 NR_122040 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA 181045-3 chr13 61249784 61250340 + 439.217 NA Intergenic Intergenic -50182 NR_036128 100422973 NR_036128 ENSG00000266663 MIR3169 - microRNA 3169 ncRNA 332839 chr2 45913289 45915273 + 439.217 NA intron (NM_005400, intron 2 of 14) intron (NM_005400, intron 2 of 14) 262606 NM_005400 5581 Hs.580351 NM_005400 ENSG00000171132 PRKCE PKCE|nPKC-epsilon protein kinase C epsilon protein-coding 201601 chr10 43559198 43560263 + 439.217 NA intron (NM_001099283, intron 1 of 1) intron (NM_001099283, intron 1 of 1) 8729 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 290498 chr15 100477544 100478856 + 439.217 NA intron (NM_001290341, intron 9 of 13) L1MEg|LINE|L1 66086 NM_001290342 204219 Hs.662371 NM_178842 ENSG00000154227 CERS3 ARCI9|LASS3 ceramide synthase 3 protein-coding 198263-3 chr3 7899927 7900578 + 439.217 NA Intergenic L1M2|LINE|L1 116055 NR_110131 101927394 Hs.517767 NR_110131 ENSG00000227110 LOC101927394 - uncharacterized LOC101927394 ncRNA 192289 chr1 102847740 102848449 + 439.217 NA Intergenic L1MA2|LINE|L1 260402 NM_080629 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding 188951-5 chr2 62558707 62559575 + 439.217 NA Intergenic L1ME4a|LINE|L1 -52946 NM_198276 200728 Hs.308028 NM_198276 ENSG00000186889 TMEM17 - transmembrane protein 17 protein-coding 213899-3 chr10 97943172 97944257 + 439.217 NA intron (NM_001206528, intron 2 of 14) MER58A|DNA|hAT-Charlie -67817 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA 219081-2 chr4 36373432 36374478 + 439.217 NA Intergenic MER65-int|LTR|ERV1 52473 NR_031701 100313806 NR_031701 ENSG00000283207 MIR1255B1 MIR1255B-1|MIRN1255B1 microRNA 1255b-1 ncRNA 184032-6 chr8 67932705 67933958 + 439.217 NA Intergenic AluY|SINE|Alu -18715 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding 200019-5 chr7 53747073 53748045 + 439.217 NA intron (NR_038371, intron 4 of 5) L1PA15|LINE|L1 64372 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 190884-7 chr7 382703 383547 + 439.217 NA TTS (NR_033960) TTS (NR_033960) 3700 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA 180079-2 chr2 68699511 68700554 + 439.217 NA Intergenic AluJb|SINE|Alu -34779 NM_001007231 9938 Hs.531807 NM_014882 ENSG00000163219 ARHGAP25 HEL-S-308|KAIA0053 Rho GTPase activating protein 25 protein-coding 223737-2 chr19 43837924 43839080 + 439.217 NA intron (NM_181845, intron 6 of 6) AluJb|SINE|Alu 11181 NM_001297752 284349 Hs.652513 NM_181845 ENSG00000167637 ZNF283 HZF19|HZF41 zinc finger protein 283 protein-coding 184120-3 chr17 61116579 61117305 + 439.217 NA intron (NM_001330413, intron 23 of 25) L1MDa|LINE|L1 250762 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 192728-5 chr2 238932802 238933707 + 439.217 NA Intergenic L1MD1|LINE|L1 -6985 NR_034162 401039 Hs.516791 NM_001001698 ENSG00000227744 LINC01940 - long intergenic non-protein coding RNA 1940 ncRNA 205466-4 chr2 223255417 223256111 + 439.217 NA Intergenic L1ME3|LINE|L1 203834 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding 179727-2 chr20 19009732 19010532 + 439.217 NA Intergenic Intergenic -179929 NR_161342 100128496 Hs.664484 NR_161342 C20orf78 - chromosome 20 open reading frame 78 ncRNA 252111 chr4 124839911 124841112 + 439.217 NA Intergenic L1MA3|LINE|L1 -127779 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding 199404 chr12 17086275 17087254 + 439.217 NA Intergenic L1MEc|LINE|L1 98017 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo 188863-8 chr5 170578951 170579909 + 439.217 NA intron (NM_001278339, intron 1 of 7) intron (NM_001278339, intron 1 of 7) 75410 NM_014592 30820 Hs.484111 NM_014592 ENSG00000182132 KCNIP1 KCHIP1|VABP potassium voltage-gated channel interacting protein 1 protein-coding 227602-4 chr5 11029517 11030422 + 439.217 NA intron (NM_001288715, intron 15 of 20) L1M4c|LINE|L1 -268735 NM_001291963 1611 Hs.75189 NM_004394 ENSG00000112977 DAP - death associated protein protein-coding 278112-3 chr12 130668355 130669554 + 439.217 NA intron (NM_001351226, intron 1 of 21) LTR18B|LTR|ERVL -35034 NM_001351231 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding 228393-5 chr5 150937171 150938191 + 439.217 NA intron (NR_026867, intron 4 of 4) Tigger6a|DNA|TcMar-Tigger 8903 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 187282-5 chr6 170069482 170070393 + 439.217 NA Intergenic L1ME1|LINE|L1 -90705 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA 271524-4 chr8 144574388 144575439 + 439.217 NA intron (NM_025251, intron 2 of 10) Tigger3b|DNA|TcMar-Tigger 30782 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding 187897-11 chr6 161553223 161554051 + 439.217 NA intron (NM_004562, intron 8 of 11) L1MC5a|LINE|L1 82660 NR_134594 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA 211615-3 chr17 51587182 51588137 + 439.217 NA Intergenic Intergenic 152232 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA 197384-4 chr17 34846991 34847981 + 439.217 NA Intergenic MER72|LTR|ERV1 113974 NM_001193529 10693 Hs.73072 NM_006584 ENSG00000132141 CCT6B CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303 chaperonin containing TCP1 subunit 6B protein-coding 185964 chr10 107562363 107563157 + 439.217 NA Intergenic Intergenic -398054 NM_001206569 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding 343116 chr14 53840820 53842320 + 439.217 NA Intergenic Intergenic 106914 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA 178146-6 chr2 129267697 129268556 + 439.217 NA intron (NR_122042, intron 1 of 3) L1MA9|LINE|L1 5765 NR_122040 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA 227163 chr1 64293154 64294049 + 439.217 NA Intergenic Intergenic 89978 NM_001366233 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding 245698-3 chr15 81976139 81977287 + 439.217 NA Intergenic L1M3|LINE|L1 69305 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding 203709-2 chr16 87080122 87080995 + 439.217 NA Intergenic L1MCc|LINE|L1 22774 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA 210385-6 chr5 94534368 94535218 + 439.217 NA intron (NM_001145678, intron 3 of 20) intron (NM_001145678, intron 3 of 20) 83811 NM_173665 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding 277146 chr18 13200491 13202132 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR -17449 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 202040-6 chr5 5974339 5975124 + 439.217 NA Intergenic Intergenic 362561 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 216183-2 chr4 64019858 64021016 + 439.217 NA Intergenic Intergenic 389013 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 177531-2 chr14 70482783 70483547 + 439.217 NA intron (NR_037933, intron 1 of 1) (TA)n|Simple_repeat|Simple_repeat 591 NR_037933 317760 Hs.188369 NR_037933 ENSG00000259158 ADAM20P1 C14orf55 ADAM metallopeptidase domain 20 pseudogene 1 pseudo 192728-4 chr2 51049212 51050087 + 439.217 NA intron (NR_135237, intron 1 of 10) L1MA6|LINE|L1 17048 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 189215-4 chr2 13739190 13740223 + 439.217 NA Intergenic (TATATAT)n|Simple_repeat|Simple_repeat 661252 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA 211439 chr17 74627077 74627893 + 439.217 NA Intergenic MER58B|DNA|hAT-Charlie -3747 NM_181449 342510 Hs.158954 NM_181449 ENSG00000186407 CD300E CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2 CD300e molecule protein-coding 358928 chr4 17288955 17290449 + 439.217 NA Intergenic Intergenic 31180 NR_145770 109616994 NR_145770 ENSG00000206780 SNORA75B - small nucleolar RNA, H/ACA box 75B snoRNA 184120-7 chr6 163163657 163164567 + 439.217 NA intron (NM_001080379, intron 4 of 4) intron (NM_001080379, intron 4 of 4) 27890 NR_122120 729658 Hs.728991 NR_122120 PACRG-AS3 - PACRG antisense RNA 3 ncRNA 235157-5 chr8 126595005 126595998 + 439.217 NA Intergenic LTR101_Mam|LTR|ERVL -37023 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 234454-2 chr17 69659803 69661183 + 439.217 NA intron (NR_109972, intron 3 of 4) MER21C|LTR|ERVL 66506 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA 178146-9 chr22 33227225 33228122 + 439.217 NA Intergenic Intergenic 119144 NR_134617 105373006 Hs.637171 NR_134617 ENSG00000231253 LINC01640 - long intergenic non-protein coding RNA 1640 ncRNA 223210 chr11 85230509 85231523 + 439.217 NA intron (NM_001142699, intron 4 of 27) MLT1A1|LTR|ERVL-MaLR -307595 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 209067-4 chr7 4394070 4394866 + 439.217 NA Intergenic (TCTA)n|Simple_repeat|Simple_repeat -259631 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 190708-3 chr10 78883788 78884685 + 439.217 NA Intergenic L1ME1|LINE|L1 183212 NR_024431 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 532858 chr12 34485392 34487928 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 464164 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 214426-2 chr2 37788948 37789911 + 439.217 NA Intergenic L1M2|LINE|L1 40282 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA 296471 chr6 40219431 40220670 + 439.217 NA Intergenic ERVL-E-int|LTR|ERVL 135956 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 202655-2 chr10 75304475 75305563 + 439.217 NA intron (NR_038226, intron 2 of 3) Tigger13a|DNA|TcMar-Tigger 8636 NR_038225 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA 336001 chr11 54864848 54866240 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 158712 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 326514 chr8 135939268 135940884 + 439.217 NA Intergenic L1MCb|LINE|L1 482620 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 201425-5 chr7 62958966 62959771 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 344688 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 183768-2 chr2 86006024 86006932 + 439.217 NA Intergenic L1MA8|LINE|L1 99408 NM_015425 25885 Hs.531818 NM_015425 ENSG00000068654 POLR1A A190|AFDCIN|RPA1|RPA194|RPO1-4|RPO14 RNA polymerase I subunit A protein-coding 211175 chr2 5109632 5110690 + 439.217 NA Intergenic L1MB7|LINE|L1 -453939 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA 200546-2 chr8 141910314 141911250 + 439.217 NA Intergenic L2|LINE|L2 -124469 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 190532-6 chr21 24034016 24035005 + 439.217 NA Intergenic L1MEf|LINE|L1 286867 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA 296208-2 chr2 115701090 115702581 + 439.217 NA intron (NM_001321912, intron 8 of 25) L1M4c|LINE|L1 358020 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 230677-2 chr18 2811507 2812430 + 439.217 NA Intergenic L1M4b|LINE|L1 -35038 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding 197560-3 chr4 53830293 53831099 + 439.217 NA Intergenic Intergenic 134795 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA 191850-4 chr8 126216838 126217663 + 439.217 NA Intergenic Intergenic -108245 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 194397-4 chr6 153695823 153696675 + 439.217 NA Intergenic Intergenic -314247 NM_001145280 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding 236562 chr14 42783609 42784760 + 439.217 NA Intergenic L1M5|LINE|L1 1177328 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 191762-11 chr4 173625446 173626514 + 439.217 NA Intergenic L1M2|LINE|L1 95522 NR_003679 79804 Hs.61435 NR_003679 ENSG00000237125 HAND2-AS1 DEIN|NBLA00301|UPH HAND2 antisense RNA 1 ncRNA 206783-9 chr7 18247842 18248772 + 439.217 NA intron (NM_001321872, intron 2 of 11) intron (NM_001321872, intron 2 of 11) -41785 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 190093 chr1 237516560 237517481 + 439.217 NA intron (NM_001035, intron 24 of 104) L2b|LINE|L2 45901 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 334332 chr11 60671970 60673371 + 439.217 NA intron (NR_026946, intron 6 of 6) L1M4b|LINE|L1 -26942 NM_031457 83661 Hs.150878 NM_031457 ENSG00000166959 MS4A8 4SPAN4|CD20L5|MS4A4|MS4A8B membrane spanning 4-domains A8 protein-coding 248685-2 chr2 136532827 136533951 + 439.217 NA Intergenic Intergenic -232156 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 190444 chr12 31609300 31610082 + 439.217 NA intron (NR_046909, intron 2 of 2) intron (NR_046909, intron 2 of 2) -18555 NM_001366892 160518 Hs.118166 NM_144973 ENSG00000170456 DENND5B - DENN domain containing 5B protein-coding 186316 chr12 104233560 104234362 + 439.217 NA intron (NM_001093771, intron 1 of 16) HUERS-P3b-int|LTR|ERV1 18182 NM_001093771 7296 Hs.654922 NM_003330 ENSG00000198431 TXNRD1 GRIM-12|TR|TR1|TRXR1|TXNR thioredoxin reductase 1 protein-coding 187282 chr10 31680048 31681188 + 439.217 NA Intergenic MER44C|DNA|TcMar-Tigger 228308 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 209858-4 chr8 128507865 128508724 + 439.217 NA intron (NR_121672, intron 2 of 7) L1MEg2|LINE|L1 56385 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA 230413 chr1 54643325 54644166 + 439.217 NA intron (NM_001291332, intron 1 of 21) intron (NM_001291332, intron 1 of 21) 1959 NM_001039464 374977 Hs.412482 NM_198547 ENSG00000184313 MROH7 C1orf175|HEATR8 maestro heat like repeat family member 7 protein-coding 218027-2 chr4 175522725 175523668 + 439.217 NA Intergenic L1MA9|LINE|L1 264480 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding 228832 chr5 110229158 110230132 + 439.217 NA Intergenic L1MA4A|LINE|L1 284270 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA 379835 chr12 34656768 34658661 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 635218 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 178849 chr1 239224018 239225037 + 439.217 NA Intergenic L1M2|LINE|L1 -162041 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding 192728 chr10 21057154 21058429 + 439.217 NA intron (NM_001173484, intron 2 of 6) AluJb|SINE|Alu -116199 NR_046283 100128511 Hs.635827 NR_046283 ENSG00000231920 NEBL-AS1 - NEBL antisense RNA 1 ncRNA 200371 chr1 118370192 118370988 + 439.217 NA Intergenic L1PA16|LINE|L1 -185362 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 245786 chr1 247160380 247161447 + 439.217 NA intron (NM_003431, intron 1 of 3) intron (NM_003431, intron 1 of 3) 11104 NM_001243740 7678 Hs.421238 NM_003431 ENSG00000196418 ZNF124 HZF-16|HZF16|ZK7 zinc finger protein 124 protein-coding 226636-3 chr5 122738459 122739394 + 439.217 NA Intergenic MLT1A|LTR|ERVL-MaLR -8366 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA 202303-3 chr6 40225468 40226449 + 439.217 NA Intergenic Intergenic 130048 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 229710-2 chr1 247042463 247043473 + 439.217 NA intron (NM_033213, intron 1 of 3) intron (NM_033213, intron 1 of 3) -34911 NM_020394 57116 Hs.669893 NM_020394 ENSG00000197472 ZNF695 SBZF3 zinc finger protein 695 protein-coding 193958-4 chr19 51993222 51994245 + 439.217 NA exon (NM_001321317, exon 4 of 4) exon (NM_001321317, exon 4 of 4) -6893 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding 187809-6 chr16 52016038 52016819 + 439.217 NA Intergenic Intergenic 57507 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding 255888-3 chr8 103624514 103626118 + 439.217 NA intron (NM_001348497, intron 1 of 22) L2a|LINE|L2 -123406 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA 248684 chr2 144257757 144258697 + 439.217 NA intron (NM_001354354, intron 1 of 12) L1M7|LINE|L1 -9528 NR_148872 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding 186052-4 chr14 66932962 66933739 + 439.217 NA intron (NM_020806, intron 8 of 22) intron (NM_020806, intron 8 of 22) -256090 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 181396 chr12 38005706 38006371 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -310736 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 183153-4 chr3 13909739 13910348 + 439.217 NA Intergenic L1PB2|LINE|L1 -23013 NR_036481 100132526 Hs.637770 NR_036481 ENSG00000275340 FGD5P1 - FYVE, RhoGEF and PH domain containing 5 pseudogene 1 pseudo 179640-3 chr20 43807046 43807886 + 439.217 NA Intergenic L1MB7|LINE|L1 -80464 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding 418574 chr6 61514043 61516078 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -59070 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 217061-2 chr18 7745728 7746482 + 439.217 NA intron (NM_002845, intron 1 of 30) L1MEg|LINE|L1 178789 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding 288126-2 chr5 114826420 114827761 + 439.217 NA Intergenic Intergenic -53677 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA 180606-7 chr8 135949470 135950151 + 439.217 NA Intergenic MIR3|SINE|MIR 492354 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 225494 chr1 20017578 20018558 + 439.217 NA Intergenic L1MA5|LINE|L1 -37634 NM_000300 5320 Hs.466804 NM_000300 ENSG00000188257 PLA2G2A MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2 phospholipase A2 group IIA protein-coding 178322-9 chr6 40654689 40655561 + 439.217 NA Intergenic (TGA)n|Simple_repeat|Simple_repeat -67761 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 325987 chr1 187945085 187946778 + 439.217 NA Intergenic L1MCa|LINE|L1 502303 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 420594 chr6 27357929 27360140 + 439.217 NA non-coding (NR_002722, exon 4 of 4) non-coding (NR_002722, exon 4 of 4) 12491 NR_002722 7754 Hs.8198 NR_002722 ZNF204P ZNF184-Lp|ZNF204|ZNF315P|b24o18.1 zinc finger protein 204, pseudogene pseudo 355941 chr4 49057526 49059161 + 439.217 NA intron (NM_001286791, intron 15 of 15) L1MA8|LINE|L1 71701 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 188512-3 chr5 15990934 15991618 + 439.217 NA Intergenic L1MA9|LINE|L1 56094 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA 186667-2 chr2 124536021 124536814 + 439.217 NA intron (NM_130773, intron 10 of 23) MER5A|DNA|hAT-Charlie 511130 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 236123-4 chr8 71075526 71076601 + 439.217 NA Intergenic L1MA7|LINE|L1 280643 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding 385896 chr7 105951017 105952678 + 439.217 NA Intergenic L1MEd|LINE|L1 -11417 NM_152750 222256 Hs.150120 NM_152750 ENSG00000128536 CDHR3 CDH28 cadherin related family member 3 protein-coding 233400-2 chr18 1190131 1191220 + 439.217 NA Intergenic Intergenic 168954 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 184295-3 chr14 55993398 55994192 + 439.217 NA Intergenic L1ME1|LINE|L1 -124616 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding 181748-3 chr15 95693753 95694517 + 439.217 NA Intergenic L1MCc|LINE|L1 261042 NR_027133 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA 361651 chr5 167678270 167679789 + 439.217 NA intron (NM_001368145, intron 1 of 26) intron (NM_001368145, intron 1 of 26) -75900 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding 179552-5 chr20 42246973 42247916 + 439.217 NA intron (NM_133170, intron 15 of 31) LTR104_Mam|LTR|Gypsy -438039 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 191323-3 chr7 28967123 28967948 + 439.217 NA Intergenic Intergenic -9205 NM_014817 9865 Hs.744120 NM_014817 ENSG00000255690 TRIL - TLR4 interactor with leucine rich repeats protein-coding 213986-2 chr10 76170331 76171094 + 439.217 NA intron (NM_001305581, intron 5 of 6) intron (NM_001305581, intron 5 of 6) 387951 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 198438-7 chr8 127011161 127012178 + 439.217 NA Intergenic Intergenic -1485 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 206608 chr1 58826244 58827332 + 439.217 NA intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 41637 NR_034014 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA 293221-2 chr8 135101892 135103378 + 439.217 NA Intergenic HAL1|LINE|L1 -131496 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 259050-4 chr9 105224173 105225351 + 439.217 NA Intergenic L1M4b|LINE|L1 -19843 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding 194222-2 chr15 61264387 61265406 + 439.217 NA Intergenic L1MC4|LINE|L1 -35594 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding 240867 chr10 106327627 106328987 + 439.217 NA Intergenic THE1B|LTR|ERVL-MaLR 188142 NR_134331 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA 238934 chr10 31682694 31683768 + 439.217 NA Intergenic L1M4|LINE|L1 225695 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 222859-3 chr14 61375183 61376261 + 439.217 NA intron (NM_006255, intron 1 of 13) MSTA|LTR|ERVL-MaLR 54279 NM_006255 5583 Hs.333907 NM_006255 ENSG00000027075 PRKCH PKC-L|PKCL|PRKCL|nPKC-eta protein kinase C eta protein-coding 181924-7 chr8 125516162 125516877 + 439.217 NA Intergenic Intergenic 84310 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 239549-2 chr14 62437676 62438567 + 439.217 NA Intergenic L1M2a|LINE|L1 -298148 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 182802-4 chr6 66085314 66086129 + 439.217 NA Intergenic L1MA8|LINE|L1 297842 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 198087-3 chr20 57764751 57765664 + 439.217 NA Intergenic L1MEf|LINE|L1 -53671 NM_199171 56937 Hs.517155 NM_020182 ENSG00000124225 PMEPA1 STAG1|TMEPAI prostate transmembrane protein, androgen induced 1 protein-coding 178234-4 chr14 70444394 70445021 + 439.217 NA Intergenic LTR25-int|LTR|ERV1 -7467 NM_003813 8747 Hs.178748 NM_003813 ENSG00000139985 ADAM21 ADAM 21|ADAM31 ADAM metallopeptidase domain 21 protein-coding 241130-4 chr3 191980069 191981197 + 439.217 NA Intergenic L1M4|LINE|L1 -257997 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 224088 chr10 8530535 8531362 + 439.217 NA Intergenic Intergenic 63443 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA 208101-3 chr2 18266177 18267152 + 439.217 NA Intergenic MLT2A2|LTR|ERVL 293989 NM_020905 57665 Hs.120319 NM_020905 ENSG00000240857 RDH14 PAN2|SDR7C4 retinol dehydrogenase 14 protein-coding 229183-2 chr21 25166077 25167278 + 439.217 NA Intergenic Intergenic 265024 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA 209858-3 chr2 34651874 34652802 + 439.217 NA Intergenic Intergenic -25219 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 254834 chr19 27607826 27609164 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -184936 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 261510-4 chr8 58353665 58355128 + 439.217 NA Intergenic L2b|LINE|L2 -56868 NM_001330535 137886 Hs.155572 NM_001077619 ENSG00000215114 UBXN2B p37 UBX domain protein 2B protein-coding 179200-4 chr4 73953514 73954697 + 439.217 NA Intergenic MER11B|LTR|ERVK 27922 NM_002619 5196 Hs.81564 NM_002619 ENSG00000163737 PF4 CXCL4|PF-4|SCYB4 platelet factor 4 protein-coding 223386-3 chr14 76617150 76618302 + 439.217 NA Intergenic L1MEf|LINE|L1 -143742 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 513884 chr15 69935591 69937974 + 439.217 NA Intergenic L1M3c|LINE|L1 101548 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA 217676-4 chr8 46468639 46469601 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 148523 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 179815-9 chr7 33194329 33195405 + 439.217 NA intron (NM_198428, intron 5 of 22) intron (NM_198428, intron 5 of 22) 65303 NM_001348043 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding 246313 chr4 34405838 34406827 + 439.217 NA Intergenic L1ME3F|LINE|L1 -136585 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 181133 chr14 59062267 59063019 + 439.217 NA Intergenic L1M3|LINE|L1 -126024 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding 255361 chr3 11071471 11072518 + 439.217 NA Intergenic LOR1-int|LTR|ERV1 -52770 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA 267219 chr7 7073337 7074688 + 439.217 NA Intergenic SATR2|Satellite|Satellite -6967 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA 271173 chr8 46060307 46061830 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 556575 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 179815-11 chr8 139202876 139203529 + 439.217 NA Intergenic Intergenic -289161 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 199931-2 chr22 42056539 42057301 + 439.217 NA Intergenic L1MB7|LINE|L1 13892 NM_000262 4668 Hs.75372 NM_000262 ENSG00000198951 NAGA D22S674|GALB alpha-N-acetylgalactosaminidase protein-coding 214426-3 chr3 118148077 118149016 + 439.217 NA Intergenic L1ME1|LINE|L1 -457621 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 177795-5 chr3 80930149 80930729 + 439.217 NA Intergenic Intergenic -63429 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA 252725-3 chr6 40223981 40225077 + 439.217 NA Intergenic HAL1|LINE|L1 131477 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 349177 chr10 76259574 76261051 + 439.217 NA intron (NM_001305581, intron 5 of 6) L1MA5A|LINE|L1 477551 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 228744 chr14 81835496 81836602 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR -92911 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 251583 chr14 72257427 72258510 + 439.217 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -258852 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 269679-2 chr18 1177609 1178571 + 439.217 NA Intergenic L1MB1|LINE|L1 181539 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 221629-3 chrX 58345261 58346357 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -435176 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 469259 chr19 37068873 37071145 + 439.217 NA Intergenic L1ME3D|LINE|L1 -8213 NM_001329520 147923 Hs.444992 NM_144689 ENSG00000197050 ZNF420 APAK zinc finger protein 420 protein-coding 243590-4 chr19 29434406 29435624 + 439.217 NA intron (NR_040029, intron 1 of 9) AluJr4|SINE|Alu 90737 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA 255712-3 chr8 127147671 127148544 + 439.217 NA Intergenic LOR1-int|LTR|ERV1 49520 NR_120364 103021165 Hs.573407 NR_120364 CASC19 CARLO6|CARLo-6|LINC01245 cancer susceptibility 19 ncRNA 220223 chr12 4790821 4791766 + 439.217 NA Intergenic L1MB8|LINE|L1 -17883 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding 180518-6 chr21 21998215 21999064 + 439.217 NA Intergenic Intergenic 99820 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA 339954 chr8 132250270 132252132 + 439.217 NA intron (NM_004519, intron 1 of 14) AluJb|SINE|Alu -145936 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding 378956 chr10 17261711 17263330 + 439.217 NA Intergenic LTR10E|LTR|ERV1 -32535 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA 221717 chr10 75314381 75315732 + 439.217 NA intron (NR_038226, intron 2 of 3) L1M1|LINE|L1 18673 NR_038225 253264 Hs.662111 NR_038223 ENSG00000226051 ZNF503-AS1 - ZNF503 antisense RNA 1 ncRNA 212405-2 chr8 135928415 135929421 + 439.217 NA Intergenic Intergenic 471462 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 190532-15 chr9 38623937 38624845 + 439.217 NA Intergenic L1MCa|LINE|L1 3303 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA 195452-3 chr2 81030838 81031777 + 439.217 NA Intergenic L1M1|LINE|L1 435639 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 199580-6 chr5 45993724 45994470 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -297717 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 195803-10 chr8 134130347 134131495 + 439.217 NA Intergenic L1MEd|LINE|L1 244425 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 186140-7 chr2 202843512 202844306 + 439.217 NA intron (NM_001288622, intron 1 of 12) L1ME3B|LINE|L1 -14675 NM_001288624 130026 Hs.516629 NM_138468 ENSG00000163596 ICA1L ALS2CR14|ALS2CR15 islet cell autoantigen 1 like protein-coding 463462 chr12 133112767 133114996 + 439.217 NA Intergenic AluJb|SINE|Alu 16592 NM_001277291 101060200 Hs.614816 NM_001277291 ENSG00000214029 ZNF891 - zinc finger protein 891 protein-coding 181484-3 chr16 79088191 79089067 + 439.217 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 512108 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 311932 chr15 98057636 98059183 + 439.217 NA Intergenic L1MD1|LINE|L1 30344 NR_120325 101927332 NR_120325 LINC01582 - long intergenic non-protein coding RNA 1582 ncRNA 210209-5 chr5 6063183 6064119 + 439.217 NA Intergenic L1MC1|LINE|L1 273641 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 215216-6 chr8 144565126 144565910 + 439.217 NA intron (NM_025251, intron 2 of 10) AluSx1|SINE|Alu -36407 NM_001001795 414919 Hs.105685 NM_001001795 ENSG00000213563 C8orf82 - chromosome 8 open reading frame 82 protein-coding 271260 chr11 115450236 115451819 + 439.217 NA intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) 53388 NM_001301043 23705 Hs.370510 NM_014333 ENSG00000182985 CADM1 BL2|IGSF4|IGSF4A|NECL2|Necl-2|RA175|ST17|SYNCAM|TSLC1|sTSLC-1|sgIGSF|synCAM1 cell adhesion molecule 1 protein-coding 191411-4 chr2 65524638 65525622 + 439.217 NA Intergenic Intergenic -92531 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding 243765-5 chr8 136135543 136136865 + 439.217 NA Intergenic Intergenic -394594 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 178146-3 chr12 37949345 37950171 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -367016 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 212845-2 chr15 45960652 45961772 + 439.217 NA Intergenic L1MEg|LINE|L1 256017 NR_135680 105370802 Hs.447522 NR_135680 ENSG00000259200 LOC105370802 - uncharacterized LOC105370802 ncRNA 226372 chr12 1178445 1179340 + 439.217 NA intron (NR_027948, intron 7 of 19) L2a|LINE|L2 151144 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding 216710-4 chr3 4958794 4959688 + 439.217 NA intron (NR_125915, intron 1 of 3) L1ME2|LINE|L1 -20196 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|Clast5|DEC1|HLHB2|SHARP-2|SHARP2|STRA13|Stra14 basic helix-loop-helix family member e40 protein-coding 237001-2 chr19 34551537 34552612 + 439.217 NA Intergenic L1MEc|LINE|L1 -6688 NR_146880 100129800 NR_146880 ZNF807 ZNF181P1|ZNF807P zinc finger protein 807 pseudo 182538 chr8 89054313 89055350 + 439.217 NA Intergenic MIR|SINE|MIR 702880 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 210209 chr1 210960266 210961304 + 439.217 NA intron (NM_002238, intron 6 of 10) L1ME1|LINE|L1 172589 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA 317993-2 chr16 35447641 35448826 + 439.217 NA Intergenic Intergenic 32363 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 223386-2 chr12 40788170 40789051 + 439.217 NA intron (NM_001256063, intron 1 of 15) MamGypLTR3a|LTR|Gypsy -39328 NM_001256064 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding 209594-5 chr17 6768629 6769643 + 439.217 NA intron (NR_046398, intron 3 of 4) L1MEd|LINE|L1 -7079 NM_153230 162517 Hs.368364 NM_153230 ENSG00000177294 FBXO39 CT144|Fbx39 F-box protein 39 protein-coding 302269 chr2 228089267 228090718 + 439.217 NA intron (NM_030623, intron 3 of 10) MSTB-int|LTR|ERVL-MaLR 91653 NM_030623 80309 Hs.436306 NM_030623 ENSG00000153820 SPHKAP SKIP SPHK1 interactor, AKAP domain containing protein-coding 177707-6 chr21 34258918 34259741 + 439.217 NA Intergenic L2|LINE|L2 78652 NR_027266 114036 Hs.720230 NM_153751 ENSG00000227456 LINC00310 C21orf82|NCRNA00310 long intergenic non-protein coding RNA 310 ncRNA 181133-5 chr5 124135849 124137027 + 439.217 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 302082 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 375442 chr8 135106228 135107831 + 439.217 NA Intergenic L1MA1|LINE|L1 -127102 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 190884-6 chr5 110805301 110806222 + 439.217 NA Intergenic Intergenic 66754 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding 203621 chr16 31909974 31911067 + 439.217 NA intron (NR_049749, intron 4 of 4) L1M1|LINE|L1 36713 NM_001265588 10308 Hs.460645 NM_003414 ENSG00000185947 ZNF267 HZF2 zinc finger protein 267 protein-coding 395646-2 chr4 45420975 45422843 + 439.217 NA Intergenic L1PB1|LINE|L1 -695275 NM_001270880 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding 295066 chr7 45314159 45315406 + 439.217 NA Intergenic L1MDa|LINE|L1 156991 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding 230237 chr19 51946938 51947903 + 439.217 NA TTS (NM_024840) TTS (NM_024840) -1714 NR_103847 101669766 Hs.637744 NR_103847 ENSG00000269235 ZNF350-AS1 HCCAT3|uc002pyc ZNF350 antisense RNA 1 ncRNA 253252-2 chr2 104516965 104518054 + 439.217 NA Intergenic Intergenic -7000 NR_110113 101927360 Hs.650324 NR_110113 ENSG00000234781 LINC01103 - long intergenic non-protein coding RNA 1103 ncRNA 234542-3 chr8 139119859 139120961 + 439.217 NA Intergenic Intergenic -206369 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 227954 chr15 62216892 62218161 + 439.217 NA Intergenic MER4B-int|LTR|ERV1 -14208 NR_148210 107984784 Hs.591131 NR_148210 ENSG00000259697 LOC107984784 - uncharacterized LOC107984784 ncRNA 204148-5 chr9 27634331 27635436 + 439.217 NA Intergenic Intergenic -61017 NM_145005 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 189390-5 chr7 64349130 64349858 + 439.217 NA 3' UTR (NM_001170905, exon 4 of 4) 3' UTR (NM_001170905, exon 4 of 4) 35533 NM_001170905 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding 276619-5 chr6 129778560 129779804 + 439.217 NA Intergenic L1MEd|LINE|L1 -69005 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding 192641-4 chr2 172201585 172202555 + 439.217 NA Intergenic MamSINE1|SINE|tRNA-RTE 99064 NR_126376 104326193 Hs.600690 NR_126376 ENSG00000236651 DLX2-DT DLX2-AS1|TCONS_00003049 DLX2 divergent transcript ncRNA 209506-3 chr9 96816235 96816956 + 439.217 NA 3' UTR (NM_001346991, exon 5 of 5) 3' UTR (NM_001346991, exon 5 of 5) 37919 NM_001001662 158431 Hs.30567 NM_001001662 ENSG00000196597 ZNF782 - zinc finger protein 782 protein-coding 201864 chr11 45326494 45327535 + 439.217 NA Intergenic L1MB5|LINE|L1 -28357 NR_120557 101928812 Hs.444059 NR_120557 ENSG00000254427 LINC02696 - long intergenic non-protein coding RNA 2696 ncRNA 272578-2 chr13 26437811 26439312 + 439.217 NA Intergenic L1MA5A|LINE|L1 -119122 NM_006646 10810 Hs.618732 NM_006646 ENSG00000132970 WASF3 Brush-1|SCAR3|WAVE3 WASP family member 3 protein-coding 177795-3 chr2 128916955 128917668 + 439.217 NA Intergenic L1M4|LINE|L1 52711 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 271085 chr5 26161832 26163204 + 439.217 NA Intergenic L1MC3|LINE|L1 876068 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 186228-8 chr6 142936675 142937445 + 439.217 NA intron (NM_006734, intron 1 of 9) intron (NM_006734, intron 1 of 9) 8116 NM_006734 3097 Hs.510172 NM_006734 ENSG00000010818 HIVEP2 HIV-EP2|MBP-2|MIBP1|MRD43|SHN2|ZAS2|ZNF40B human immunodeficiency virus type I enhancer binding protein 2 protein-coding 203972-4 chr17 34470246 34471239 + 439.217 NA Intergenic L2b|LINE|L2 -107509 NM_002981 6346 Hs.72918 NM_002981 ENSG00000108702 CCL1 I-309|P500|SCYA1|SISe|TCA3 C-C motif chemokine ligand 1 protein-coding 177883 chr10 20699920 20700781 + 439.217 NA Intergenic L1MEf|LINE|L1 148380 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA 224791-5 chr7 16403346 16404116 + 439.217 NA intron (NM_001101426, intron 2 of 9) intron (NM_001101426, intron 2 of 9) 17807 NM_001368197 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding 266693 chr11 38826285 38827788 + 439.217 NA Intergenic L1PA17|LINE|L1 178178 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA 186228-6 chr3 31955397 31956261 + 439.217 NA intron (NM_001174060, intron 1 of 10) LTR67B|LTR|ERVL -25921 NM_001137674 344787 Hs.585139 NM_001137674 ENSG00000197385 ZNF860 - zinc finger protein 860 protein-coding 296120-2 chr8 115034910 115036239 + 439.217 NA Intergenic LTR78B|LTR|ERV1 632439 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 198438-6 chr7 64704520 64705360 + 439.217 NA intron (NM_016220, intron 6 of 6) AluSq|SINE|Alu 25876 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 182099 chr1 181881518 181882244 + 439.217 NA Intergenic L1MD|LINE|L1 179831 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding 201074-2 chr17 26829477 26830517 + 439.217 NA Intergenic Intergenic 259244 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 180606-5 chr5 145376770 145377733 + 439.217 NA Intergenic L1PA13|LINE|L1 458091 NM_205846 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding 294539-4 chr7 47767470 47768757 + 439.217 NA Intergenic AluSp|SINE|Alu 6637 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA 204587-6 chr5 141390388 141391490 + 439.217 NA promoter-TSS (NM_014004) promoter-TSS (NM_014004) -977 NM_014004 9708 Hs.368160 NM_014004 ENSG00000253767 PCDHGA8 PCDH-GAMMA-A8 protocadherin gamma subfamily A, 8 protein-coding 270294 chr12 10648262 10649681 + 439.217 NA intron (NM_018423, intron 1 of 10) intron (NM_018423, intron 1 of 10) 25081 NM_018423 55359 Hs.24979 NM_018423 ENSG00000060140 STYK1 NOK|SuRTK106 serine/threonine/tyrosine kinase 1 protein-coding 181924-6 chr5 28332003 28332860 + 439.217 NA Intergenic L1PA16|LINE|L1 -44766 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA 190884-9 chr8 87439560 87440501 + 439.217 NA Intergenic L1MEg|LINE|L1 433985 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 183066-6 chr8 142350353 142351206 + 439.217 NA intron (NM_001366903, intron 2 of 9) L1ME3E|LINE|L1 52403 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 192113 chr10 116130103 116130828 + 439.217 NA intron (NM_145793, intron 3 of 8) L1ME2z|LINE|L1 64324 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA 198702-2 chr19 57697488 57698706 + 439.217 NA non-coding (NR_110974, exon 4 of 4) non-coding (NR_110974, exon 4 of 4) 11107 NR_110974 7710 Hs.646378 NM_003444 ENSG00000179909 ZNF154 pHZ-92 zinc finger protein 154 protein-coding 195276-4 chr5 121601243 121602405 + 439.217 NA Intergenic L1MA8|LINE|L1 -250058 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding 216534-9 chr8 139720338 139721428 + 439.217 NA Intergenic L1ME3D|LINE|L1 -17760 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 219521-2 chr2 12284440 12285302 + 439.217 NA intron (NR_110196, intron 3 of 5) L1MB5|LINE|L1 85741 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA 249124 chr12 46616253 46617330 + 439.217 NA intron (NR_125377, intron 3 of 3) L1ME1|LINE|L1 209206 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding 187809-3 chr12 15435837 15436667 + 439.217 NA intron (NM_030667, intron 1 of 26) L1P1|LINE|L1 -110359 NM_030670 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding 204851-3 chr10 133447283 133448124 + 439.217 NA Intergenic L1MA5|LINE|L1 -6225 NR_149718 619207 Hs.659384 NM_001033584 ENSG00000214279 SCART1 - scavenger receptor family member expressed on T cells 1 pseudo 177356 chr10 85026741 85027669 + 439.217 NA Intergenic LOR1-int|LTR|ERV1 171700 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 244205-3 chr7 22617728 22618889 + 439.217 NA Intergenic L1MEg|LINE|L1 47225 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA 281450 chr11 54934767 54936079 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 228591 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 256503-2 chr11 34710042 34711014 + 439.217 NA Intergenic L1MEc|LINE|L1 77962 NM_001206616 26298 Hs.653859 NM_012153 ENSG00000135373 EHF ESE3|ESE3B|ESEJ ETS homologous factor protein-coding 277936-2 chr21 27764318 27765738 + 439.217 NA Intergenic Intergenic 42649 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 205641 chr11 50433572 50434502 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 24890 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 181221-6 chr2 185818208 185819164 + 439.217 NA intron (NM_173651, intron 19 of 22) L1MB3|LINE|L1 -18535 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA 190532-11 chr5 178975810 178976871 + 439.217 NA Intergenic L2a|LINE|L2 18980 NM_000843 2916 Hs.248131 NM_000843 ENSG00000113262 GRM6 CSNB1B|GPRC1F|MGLUR6|mGlu6 glutamate metabotropic receptor 6 protein-coding 179025-4 chr4 82763811 82764495 + 439.217 NA intron (NM_001037582, intron 1 of 4) MER3|DNA|hAT-Charlie -10723 NR_030301 693160 NR_030301 ENSG00000207746 MIR575 MIRN575|hsa-mir-575 microRNA 575 ncRNA 183593-7 chr22 28537401 28538222 + 439.217 NA intron (NM_001145418, intron 2 of 22) intron (NM_001145418, intron 2 of 22) 77942 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA 336879-2 chr5 42785171 42786759 + 439.217 NA intron (NM_001134848, intron 6 of 8) L1PA17|LINE|L1 25927 NM_005410 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding 208364-2 chr2 117587594 117588698 + 439.217 NA Intergenic Intergenic -226545 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 321595 chr2 126727654 126729014 + 439.217 NA Intergenic L1M4|LINE|L1 72176 NM_002101 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 188073-2 chr3 109576198 109577095 + 439.217 NA Intergenic L1ME1|LINE|L1 -26182 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA 235596 chr14 31982277 31983243 + 439.217 NA Intergenic L1PA16|LINE|L1 37907 NR_146544 105370439 NR_146544 ENSG00000258474 LINC02313 - long intergenic non-protein coding RNA 2313 ncRNA 201249 chr20 54709856 54710644 + 439.217 NA Intergenic Intergenic 234657 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 226021-2 chr14 80073747 80074953 + 439.217 NA Intergenic MIRc|SINE|MIR -137069 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA 223825-3 chr8 87075135 87076082 + 439.217 NA intron (NM_173538, intron 4 of 10) LOR1b|LTR|ERV1 209193 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 223122 chr15 80367591 80368425 + 439.217 NA Intergenic HUERS-P3b-int|LTR|ERV1 -26203 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA 333980 chr4 66994277 66995790 + 439.217 NA Intergenic Intergenic 426967 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA 203884-3 chr19 56577393 56578121 + 439.217 NA exon (NM_001001668, exon 6 of 6) exon (NM_001001668, exon 6 of 6) 10289 NM_001001668 388566 Hs.204449 NM_001001668 ENSG00000197016 ZNF470 CZF-1 zinc finger protein 470 protein-coding 255097-5 chr3 118270689 118271899 + 439.217 NA Intergenic L2c|LINE|L2 -370474 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 220487-3 chr20 42129071 42130096 + 439.217 NA intron (NM_133170, intron 19 of 31) intron (NM_133170, intron 19 of 31) -511206 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 222859-2 chr11 38356620 38357795 + 439.217 NA Intergenic Intergenic 289149 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA 205729-4 chr5 141260830 141261519 + 439.217 NA Intergenic Intergenic 15779 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 186491 chr1 63289289 63290004 + 439.217 NA intron (NR_038252, intron 3 of 11) L1M1|LINE|L1 27611 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA 193782-2 chr2 98680400 98681121 + 439.217 NA intron (NM_012214, intron 2 of 15) L1M5|LINE|L1 -17287 NM_001160154 11320 Hs.177576 NM_012214 ENSG00000071073 MGAT4A GNT-IV|GNT-IVA|GnT-4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A protein-coding 223386 chr1 166894107 166894963 + 439.217 NA Intergenic L1MC1|LINE|L1 -18271 NM_053053 117143 Hs.435967 NM_053053 ENSG00000152382 TADA1 ADA1|HFI1|STAF42|TADA1L|hADA1 transcriptional adaptor 1 protein-coding 196242 chr1 102299937 102301042 + 439.217 NA Intergenic MSTC|LTR|ERVL-MaLR -303255 NM_058170 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding 211790-3 chr11 112715501 112716336 + 439.217 NA Intergenic L1ME1|LINE|L1 -160116 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 302972 chr11 50470628 50471997 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 62165 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 214689-4 chr8 136390751 136391984 + 439.217 NA Intergenic Intergenic -139431 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 216710-2 chr10 120616916 120617681 + 439.217 NA Intergenic L1MEc|LINE|L1 19349 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA 255361-2 chr8 105183990 105184898 + 439.217 NA Intergenic L1PA16|LINE|L1 -133994 NM_012082 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 184998-3 chr10 90137296 90138009 + 439.217 NA Intergenic HUERS-P3b-int|LTR|ERV1 -180279 NR_110655 101926924 Hs.500498 NR_110655 ENSG00000226159 LINC01375 - long intergenic non-protein coding RNA 1375 ncRNA 179552-7 chr6 37600116 37601056 + 439.217 NA Intergenic MIRc|SINE|MIR -45164 NR_039669 100616413 NR_039669 ENSG00000263926 MIR4462 - microRNA 4462 ncRNA 221102-2 chr14 52397561 52398761 + 439.217 NA Intergenic Intergenic 83849 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding 194837-3 chr2 122479521 122480319 + 439.217 NA Intergenic Intergenic 593561 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 232082-3 chr8 83755185 83756379 + 439.217 NA Intergenic Intergenic 352024 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 181485 chr5 6242370 6243285 + 439.217 NA Intergenic LTR79|LTR|ERVL 94465 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 191059-4 chr3 44247179 44248037 + 439.217 NA intron (NM_001145030, intron 2 of 19) HAL1b|LINE|L1 5722 NM_001145030 375337 Hs.132125 NM_001145030 ENSG00000173769 TOPAZ1 C3orf77 testis and ovary specific PAZ domain containing 1 protein-coding 379396 chr1 11505278 11506864 + 439.217 NA intron (NM_020780, intron 3 of 20) L1MEg|LINE|L1 26916 NM_020780 57540 Hs.202355 NM_020780 ENSG00000204624 DISP3 PTCHD2 dispatched RND transporter family member 3 protein-coding 190796-2 chr12 34666359 34667089 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 644228 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 276004 chr20 45234171 45235473 + 439.217 NA Intergenic L1M2c|LINE|L1 13449 NM_003008 6407 Hs.537218 NM_003008 ENSG00000124157 SEMG2 SGII semenogelin 2 protein-coding 213108 chr14 77997324 77998439 + 439.217 NA Intergenic L1ME1|LINE|L1 -172492 NM_001366425 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 205290-2 chr5 9726683 9727703 + 439.217 NA intron (NR_027112, intron 5 of 12) intron (NR_027112, intron 5 of 12) -96842 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding 302708 chr11 109694644 109696143 + 439.217 NA Intergenic L1M2|LINE|L1 273203 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding 178234 chr1 67844327 67845042 + 439.217 NA intron (NR_040077, intron 1 of 9) MIRb|SINE|MIR -11217 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding 240691-3 chr5 96236452 96237805 + 439.217 NA intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 157990 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA 190971 chr2 98264373 98265106 + 439.217 NA intron (NM_001345864, intron 15 of 21) L1M3c|LINE|L1 -81416 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 225845-3 chr5 42206008 42206933 + 439.217 NA Intergenic L1MEc|LINE|L1 -31125 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 186140-3 chr19 44441794 44442626 + 439.217 NA intron (NM_001278510, intron 4 of 5) intron (NM_001278510, intron 4 of 5) 6262 NR_103551 7772 Hs.709348 NM_014518 ENSG00000278318 ZNF229 - zinc finger protein 229 protein-coding 213459-4 chr22 47957432 47958277 + 439.217 NA Intergenic L1MD3|LINE|L1 -316510 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 180694-6 chr2 102548981 102550049 + 439.217 NA Intergenic L1M4|LINE|L1 -70038 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding 184559-3 chr11 114622364 114623327 + 439.217 NA Intergenic Intergenic -27059 NM_017678 54827 Hs.179100 NM_017678 ENSG00000137634 NXPE4 C11orf33|FAM55D neurexophilin and PC-esterase domain family member 4 protein-coding 249739-4 chr8 89159709 89160952 + 439.217 NA Intergenic Intergenic 597381 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 194397-3 chr2 79429298 79430245 + 439.217 NA Intergenic Intergenic 71073 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 193958-3 chr17 52451158 52452156 + 439.217 NA intron (NR_146898, intron 1 of 3) intron (NR_146898, intron 1 of 3) 61135 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA 260104-3 chr9 118061644 118062790 + 439.217 NA Intergenic L1ME1|LINE|L1 357814 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding 187985-2 chr7 64107704 64108368 + 439.217 NA Intergenic Intergenic 62602 NM_001159522 442319 Hs.640774 NM_001159522 ENSG00000214652 ZNF727 ZNF727P zinc finger protein 727 protein-coding 188248-3 chr17 61571090 61572091 + 439.217 NA Intergenic Intergenic 19629 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 191850-2 chr7 45619563 45620346 + 439.217 NA intron (NM_001281768, intron 4 of 9) L1MA9|LINE|L1 45586 NM_021116 107 Hs.192215 NM_021116 ENSG00000164742 ADCY1 AC1|DFNB44 adenylate cyclase 1 protein-coding 195100-2 chr14 43000346 43001211 + 439.217 NA Intergenic Intergenic 1393922 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 188424-3 chr19 37545842 37546738 + 439.217 NA Intergenic Intergenic -2659 NR_038248 100507433 Hs.121283 NR_038247 ENSG00000267470 ZNF571-AS1 - ZNF571 antisense RNA 1 ncRNA 177444 chr10 80654020 80654737 + 439.217 NA TTS (NR_155749) TTS (NR_155749) 4581 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 188863-9 chr8 83924633 83925652 + 439.217 NA Intergenic L1M1|LINE|L1 -257645 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 196769 chr18 72047605 72048531 + 439.217 NA Intergenic L1M3|LINE|L1 -265842 NR_126324 102724913 NR_126324 ENSG00000265352 LINC01899 - long intergenic non-protein coding RNA 1899 ncRNA 179464 chr11 6583642 6584619 + 439.217 NA Intergenic L1MA3|LINE|L1 19486 NM_015324 23378 Hs.652255 NM_015324 ENSG00000132275 RRP8 KIAA0409|NML ribosomal RNA processing 8 protein-coding 243590-2 chr16 8267865 8268867 + 439.217 NA Intergenic L1PB1|LINE|L1 321472 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 289268-2 chr12 34540541 34541502 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 518525 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 188248-6 chr6 62100399 62101258 + 439.217 NA intron (NR_146874, intron 2 of 13) Tigger1|DNA|TcMar-Tigger 185397 NR_146873 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 180430-6 chr2 128914266 128915178 + 439.217 NA Intergenic L1MD3|LINE|L1 50122 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 186228-5 chr19 37444219 37445108 + 439.217 NA intron (NM_152484, intron 3 of 5) intron (NM_152484, intron 3 of 5) 22781 NM_001330482 148266 Hs.511848 NM_152484 ENSG00000196437 ZNF569 ZAP1|ZNF zinc finger protein 569 protein-coding 278376 chr8 144567871 144569377 + 439.217 NA intron (NM_025251, intron 2 of 10) L1ME1|LINE|L1 37071 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding 195627-7 chr5 46043463 46044654 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -347678 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 340481 chr8 46473780 46475419 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 143044 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 187370-5 chr19 36870868 36871800 + 439.217 NA intron (NM_001242476, intron 3 of 3) MLT1A0|LTR|ERVL-MaLR 19683 NM_001242476 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding 181572-8 chr3 187420566 187421381 + 439.217 NA Intergenic L1PA17|LINE|L1 -26073 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA 182978 chr11 63225447 63226266 + 439.217 NA intron (NM_199352, intron 2 of 8) L1MA3|LINE|L1 3796 NM_199352 387601 Hs.332119 NM_199352 ENSG00000196600 SLC22A25 HIMTP|UST6 solute carrier family 22 member 25 protein-coding 230589 chr2 24896274 24897326 + 439.217 NA intron (NM_001320613, intron 2 of 21) L1MEc|LINE|L1 23437 NM_004036 109 Hs.467898 NM_004036 ENSG00000138031 ADCY3 AC-III|AC3|BMIQ19 adenylate cyclase 3 protein-coding 208804-2 chr11 78240890 78242205 + 439.217 NA intron (NM_012296, intron 3 of 9) L1M2a|LINE|L1 52628 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding 217237-2 chr5 130439429 130440515 + 439.217 NA Intergenic Intergenic 535507 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding 179113-2 chr16 62892242 62893106 + 439.217 NA Intergenic L1M2|LINE|L1 -856236 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 187897-8 chr5 16342686 16343486 + 439.217 NA Intergenic MLT1A|LTR|ERVL-MaLR 98016 NR_104625 101929505 Hs.639360 NR_104625 ENSG00000248150 LINC02150 - long intergenic non-protein coding RNA 2150 ncRNA 209419-2 chr6 38734379 38735286 + 439.217 NA intron (NM_001371, intron 4 of 91) intron (NM_001371, intron 4 of 91) 19521 NM_001206927 1769 Hs.520106 NM_001371 ENSG00000124721 DNAH8 ATPase|hdhc9 dynein axonemal heavy chain 8 protein-coding 336089 chr10 111715350 111716774 + 439.217 NA Intergenic L1MCa|LINE|L1 467703 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding 188336-3 chr2 46711126 46711993 + 439.217 NA intron (NM_144949, intron 1 of 1) L1ME2|LINE|L1 12264 NM_144949 9655 Hs.468426 NM_014011 ENSG00000171150 SOCS5 CIS6|CISH6|Cish5|SOCS-5 suppressor of cytokine signaling 5 protein-coding 226548-2 chr2 80653321 80654291 + 439.217 NA Intergenic L1MB4|LINE|L1 340427 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 195188-6 chr8 86265503 86266366 + 439.217 NA Intergenic L3|LINE|CR1 -35553 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 229710-4 chr2 79655811 79656966 + 439.217 NA intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -7029 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA 201425-2 chr14 77942074 77943056 + 439.217 NA Intergenic Intergenic 142456 NR_158988 57143 Hs.413208 NM_020421 ENSG00000063761 ADCK1 - aarF domain containing kinase 1 protein-coding 222068-2 chr17 12327068 12328332 + 439.217 NA Intergenic L1ME3B|LINE|L1 -222268 NR_034145 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA 205729-6 chr9 94466174 94467054 + 439.217 NA Intergenic L1MDa|LINE|L1 -88431 NR_121568 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA 201688-5 chr5 60933862 60934515 + 439.217 NA intron (NM_001007234, intron 1 of 5) L1PB1|LINE|L1 10882 NM_001007234 1161 Hs.435237 NM_000082 ENSG00000049167 ERCC8 CKN1|CSA|UVSS2 ERCC excision repair 8, CSA ubiquitin ligase complex subunit protein-coding 186843 chr10 41731921 41732965 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 635602 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 200722-2 chr1 182046851 182048017 + 439.217 NA Intergenic AluSz6|SINE|Alu 14278 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding 408296 chr2 155792308 155794233 + 439.217 NA Intergenic Tigger2|DNA|TcMar-Tigger 461661 NR_110249 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 225845 chr18 6189727 6190785 + 439.217 NA intron (NM_001365769, intron 12 of 16) L1ME3|LINE|L1 -66488 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA 177883-3 chr15 25030365 25031289 + 439.217 NA intron (NR_146177, intron 23 of 147) intron (NR_146177, intron 23 of 147) -1046 NR_146168 100506965 Hs.592473 NR_146168 PWAR6 HBT8|PAR-6 Prader Willi/Angelman region RNA 6 ncRNA 274423-2 chr12 14338310 14339511 + 439.217 NA Intergenic ERVL-E-int|LTR|ERVL -26722 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 178586-4 chr18 5208065 5209098 + 439.217 NA Intergenic Intergenic -10829 NM_001330553 642597 Hs.437160 NM_001145194 ENSG00000231824 AKAIN1 C18orf42 A-kinase anchor inhibitor 1 protein-coding 588638 chr14 66317371 66319972 + 439.217 NA Intergenic L1MA5|LINE|L1 -167700 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 221190-4 chr8 87638414 87639693 + 439.217 NA Intergenic Intergenic 234962 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 190093-4 chr8 125943407 125944148 + 439.217 NA non-coding (NR_038446, exon 2 of 2) non-coding (NR_038446, exon 2 of 2) 7420 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 203884 chr10 86274681 86275476 + 439.217 NA intron (NM_017551, intron 2 of 15) L1M4|LINE|L1 -10290 NR_029907 442911 NR_029907 ENSG00000199104 MIR346 MIRN346|hsa-mir-346|miR-346|miRNA346 microRNA 346 ncRNA 202128-6 chr7 45307645 45308515 + 439.217 NA Intergenic MST-int|LTR|ERVL-MaLR 150289 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding 195012 chr1 45161381 45162305 + 439.217 NA intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 44762 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding 216270-2 chr16 86164163 86165151 + 439.217 NA Intergenic MIR1_Amn|SINE|MIR -31524 NR_103859 100506542 Hs.111902 NR_103859 ENSG00000269186 LINC01082 TCONS_00024492 long intergenic non-protein coding RNA 1082 ncRNA 216095-7 chr8 135369905 135370868 + 439.217 NA Intergenic Intergenic -87070 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 186492 chr16 47795421 47796358 + 439.217 NA Intergenic L1MA9|LINE|L1 -62692 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA 207662-4 chr5 9671134 9672047 + 439.217 NA intron (NR_027112, intron 9 of 12) L1PA15|LINE|L1 -41239 NM_019599 50834 Hs.567492 NM_019599 ENSG00000169777 TAS2R1 T2R1|TRB7 taste 2 receptor member 1 protein-coding 238407-2 chr20 72945 73870 + 439.217 NA Intergenic L1MDa|LINE|L1 -14265 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding 194134-6 chr7 111471189 111472171 + 439.217 NA intron (NM_001350961, intron 4 of 7) MER33|DNA|hAT-Charlie 90611 NM_032549 83943 Hs.655722 NM_032549 ENSG00000184903 IMMP2L IMMP2L-IT1|IMP2|IMP2-LIKE inner mitochondrial membrane peptidase subunit 2 protein-coding 203972-5 chr2 173518111 173518808 + 439.217 NA Intergenic L1MEc|LINE|L1 163587 NM_145810 83879 Hs.470654 NM_031942 ENSG00000144354 CDCA7 ICF3|JPO1 cell division cycle associated 7 protein-coding 212142-2 chr15 62262487 62263225 + 439.217 NA Intergenic LTR10E|LTR|ERV1 -14061 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo 252638 chr18 73220627 73222122 + 439.217 NA intron (NR_034133, intron 2 of 5) intron (NR_034133, intron 2 of 5) 43124 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA 221102 chr10 67441335 67442492 + 439.217 NA intron (NM_001127384, intron 5 of 17) L1M1|LINE|L1 -38503 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA 180430-8 chr5 42327928 42328853 + 439.217 NA Intergenic Intergenic -95049 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 450988 chr18 13196383 13198333 + 439.217 NA Intergenic L1MB3|LINE|L1 -21402 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 189039-6 chr7 40840990 40841911 + 439.217 NA intron (NM_024728, intron 14 of 14) MamRep434|DNA|TcMar-Tigger 138489 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 190796-10 chr9 26344184 26345011 + 439.217 NA Intergenic L1MA9|LINE|L1 277922 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding 190796-5 chr2 119501671 119502582 + 439.217 NA intron (NM_002980, intron 1 of 12) AluJb|SINE|Alu 22326 NM_002980 6344 Hs.42091 NM_002980 ENSG00000080293 SCTR SR secretin receptor protein-coding 216007-2 chr3 5663146 5664151 + 439.217 NA Intergenic Intergenic -413393 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 187019-3 chr4 38249447 38250579 + 439.217 NA Intergenic L1ME1|LINE|L1 -116901 NR_149123 105374410 NR_149123 ENSG00000248227 LINC02513 - long intergenic non-protein coding RNA 2513 ncRNA 179815-8 chr5 66485965 66486819 + 439.217 NA Intergenic BLACKJACK|DNA|hAT-Blackjack 25212 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA 205290 chr15 97538142 97539292 + 439.217 NA Intergenic Intergenic -16906 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA 241218-3 chr20 55218845 55220213 + 439.217 NA Intergenic L1MC3|LINE|L1 -203514 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA 217764-2 chr4 35271689 35272615 + 439.217 NA Intergenic Intergenic 971787 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 324230 chr1 241303467 241304875 + 439.217 NA intron (NM_001282778, intron 2 of 16) FLAM_A|SINE|Alu 51655 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding 241569 chr3 99488035 99488860 + 439.217 NA Intergenic L1MA8|LINE|L1 -150147 NM_001850 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding 187897-6 chr20 54542329 54543259 + 439.217 NA intron (NM_018431, intron 1 of 7) L2c|LINE|L2 67201 NM_177959 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 182011 chr2 98259186 98260052 + 439.217 NA intron (NM_001345864, intron 15 of 21) L1MB5|LINE|L1 -86536 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 190620 chr10 93269311 93270281 + 439.217 NA Intergenic Intergenic 195903 NM_000783 1592 Hs.150595 NM_000783 ENSG00000095596 CYP26A1 CP26|CYP26|P450RAI|P450RAI1 cytochrome P450 family 26 subfamily A member 1 protein-coding 288126-3 chr7 62924338 62925657 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 379059 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 213020-4 chr3 97149323 97150119 + 439.217 NA intron (NM_001080448, intron 3 of 17) intron (NM_001080448, intron 3 of 17) -289886 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 294715 chr2 89775781 89777341 + 439.217 NA Intergenic Intergenic -138654 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 195803-5 chr19 56535036 56536010 + 439.217 NA Intergenic Intergenic -3425 NM_001308440 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding 238758 chr12 46313675 46314877 + 439.217 NA Intergenic Intergenic -45233 NM_001278388 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding 195715 chr1 78462514 78463350 + 439.217 NA Intergenic L1PA15|LINE|L1 -28042 NM_001039585 5737 Hs.654365 NM_000959 ENSG00000122420 PTGFR FP prostaglandin F receptor protein-coding 178498 chr11 97869331 97870312 + 439.217 NA Intergenic L1MA2|LINE|L1 -1151128 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 209594-6 chr8 15248288 15249137 + 439.217 NA Intergenic Intergenic -10281 NM_001322879 137868 Hs.545526 NM_139167 ENSG00000185053 SGCZ ZSG1 sarcoglycan zeta protein-coding 177532-4 chr7 62579648 62580420 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 724022 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 237089 chr1 40518329 40519587 + 439.217 NA Intergenic Intergenic 10239 NM_001346956 64789 Hs.59584 NM_022774 ENSG00000164002 EXO5 C1orf176|DEM1|Exo V|hExo5 exonuclease 5 protein-coding 204587-3 chr18 4936181 4937056 + 439.217 NA Intergenic L1MEc|LINE|L1 -144564 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 271875 chr12 12647964 12649028 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR 36620 NM_001310 1389 Hs.591156 NM_001310 ENSG00000111269 CREBL2 - cAMP responsive element binding protein like 2 protein-coding 214865-3 chr8 83354027 83354973 + 439.217 NA Intergenic HUERS-P1-int|LTR|ERV1 -49258 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 181836-6 chr5 99143815 99144912 + 439.217 NA Intergenic L1MA3|LINE|L1 -214649 NR_157079 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding 494383 chr14 45256417 45259379 + 439.217 NA Intergenic L1M4|LINE|L1 -4696 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 179640-5 chr9 78482912 78483708 + 439.217 NA Intergenic L1MEf|LINE|L1 186185 NM_021154 29968 Hs.494261 NM_021154 ENSG00000135069 PSAT1 EPIP|NLS2|PSA|PSAT|PSATD phosphoserine aminotransferase 1 protein-coding 200986-2 chr10 80615965 80616729 + 439.217 NA intron (NM_207372, intron 6 of 6) intron (NM_207372, intron 6 of 6) -33450 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 177531-7 chr5 155184715 155185822 + 439.217 NA Intergenic Intergenic 171513 NM_001099293 285643 Hs.567824 NM_001099293 ENSG00000226650 KIF4B - kinesin family member 4B protein-coding 188600-2 chr10 57030693 57031668 + 439.217 NA Intergenic THE1A|LTR|ERVL-MaLR 273379 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 192465-3 chr17 34750935 34751559 + 439.217 NA Intergenic MIR|SINE|MIR 170498 NM_001304438 124842 Hs.310482 NM_207313 ENSG00000181291 TMEM132E DFNB99 transmembrane protein 132E protein-coding 191938-4 chr2 58828084 58829090 + 439.217 NA intron (NR_033873, intron 2 of 13) L1M1|LINE|L1 307834 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA 181221-7 chr2 225950789 225951578 + 439.217 NA Intergenic L1M2|LINE|L1 -191611 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 181660-4 chr5 25824013 25824875 + 439.217 NA Intergenic ERVL-E-int|LTR|ERVL 633491 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 192377 chr7 64272833 64273590 + 439.217 NA Intergenic Intergenic -40662 NM_001294255 728927 Hs.386162 NM_001170905 ENSG00000234444 ZNF736 - zinc finger protein 736 protein-coding 189742-3 chr2 65474839 65475913 + 439.217 NA Intergenic Intergenic -42777 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding 209682-3 chr16 71447165 71448090 + 439.217 NA TTS (NM_001304494) TTS (NM_001304494) -5573 NM_001367365 203533-2 chr20 57078624 57079306 + 439.217 NA Intergenic L1M3|LINE|L1 -134731 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA 181748-5 chr2 63164587 63165337 + 439.217 NA intron (NR_148704, intron 16 of 18) L1M4|LINE|L1 -45420 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 296296 chr5 56395485 56396764 + 439.217 NA Intergenic MLT1A0|LTR|ERVL-MaLR 85645 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA 313952 chr10 119355983 119357292 + 439.217 NA intron (NM_005308, intron 2 of 15) intron (NM_005308, intron 2 of 15) -21335 NR_039829 100616398 NR_039829 ENSG00000265719 MIR4681 - microRNA 4681 ncRNA 187897-5 chr2 118361097 118362081 + 439.217 NA Intergenic L1MB4|LINE|L1 -175203 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA 290586 chr10 62289833 62291042 + 439.217 NA Intergenic MLT1L|LTR|ERVL-MaLR -21593 NM_145307 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding 278727 chr10 73306552 73307779 + 439.217 NA intron (NM_001367801, intron 13 of 27) L1M4|LINE|L1 51589 NM_001350933 118491 Hs.591367 NM_145170 ENSG00000156042 CFAP70 TTC18 cilia and flagella associated protein 70 protein-coding 186579 chr10 36287925 36288911 + 439.217 NA Intergenic L1MA3|LINE|L1 510116 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 205905 chr1 191388987 191390188 + 439.217 NA Intergenic L1MA10|LINE|L1 -161089 NR_146892 105371660 Hs.127094 NR_146892 ENSG00000233882 LINC01680 - long intergenic non-protein coding RNA 1680 ncRNA 178586 chr10 81508837 81509653 + 439.217 NA Intergenic L2a|LINE|L2 -365949 NM_001010848 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 180430-3 chr14 22151700 22152505 + 439.217 NA Intergenic MIRb|SINE|MIR 280651 NR_148363 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA 227339-2 chr15 92215614 92216457 + 439.217 NA Intergenic L1MC|LINE|L1 -177846 NM_006011 8128 Hs.302341 NM_006011 ENSG00000140557 ST8SIA2 HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein-coding 199053-3 chr2 185837319 185838175 + 439.217 NA Intergenic L1MB4|LINE|L1 -37596 NR_144454 107985781 Hs.397593 NR_144453 ENSG00000231646 FSIP2-AS1 - FSIP2 antisense RNA 1 ncRNA 270558-2 chr8 87057742 87058860 + 439.217 NA intron (NM_173538, intron 4 of 10) THE1C-int|LTR|ERVL-MaLR 191886 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 190269-4 chr2 112991499 112992155 + 439.217 NA Intergenic L1MA8|LINE|L1 -13632 NM_014440 27179 Hs.278910 NM_014440 ENSG00000136694 IL36A FIL1|FIL1(EPSILON)|FIL1E|IL-1F6|IL1(EPSILON)|IL1F6 interleukin 36 alpha protein-coding 235684-3 chr3 3942948 3944138 + 439.217 NA Intergenic L1MA1|LINE|L1 -142668 NR_149025 100130207 Hs.587205 NR_149025 ENSG00000144455 LOC100130207 - uncharacterized LOC100130207 ncRNA 256063-2 chr11 48716812 48718046 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 228636 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding 246049-2 chr7 50072903 50074338 + 439.217 NA intron (NM_007009, intron 3 of 7) L1MA1|LINE|L1 19626 NM_007009 11055 Hs.388841 NM_007009 ENSG00000042813 ZPBP ZPBP1 zona pellucida binding protein protein-coding 209243 chr1 113566057 113567044 + 439.217 NA intron (NM_001142782, intron 2 of 20) L1ME3B|LINE|L1 176035 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 181397-3 chr22 10727131 10727822 + 439.217 NA Intergenic (TCCATTCCAT)n|Simple_repeat|Simple_repeat 234053 NR_132320 102723780 NR_132320 FRG1FP - FSHD region gene 1 family member F, pseudogene pseudo 218467-2 chr6 76064941 76065835 + 439.217 NA intron (NM_001563, intron 1 of 16) L1PB4|LINE|L1 7274 NM_001563 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 213899 chr10 67479481 67480379 + 439.217 NA intron (NM_001127384, intron 5 of 17) L1PA16|LINE|L1 -76520 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA 188600-3 chr10 117648995 117649790 + 439.217 NA Intergenic Intergenic -104324 NR_002791 196047 Hs.312592 NR_002791 ENSG00000229847 EMX2OS EMX2-AS1|NCRNA00045 EMX2 opposite strand/antisense RNA ncRNA 300688 chr19 37639231 37640861 + 439.217 NA intron (NM_001320666, intron 5 of 5) Tigger13a|DNA|TcMar-Tigger 15419 NM_014898 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 596544 chr19 51858529 51860980 + 439.217 NA intron (NM_001370456, intron 5 of 5) intron (NM_001370456, intron 5 of 5) 28182 NM_001135590 84765 Hs.723015 NM_032679 ENSG00000161551 ZNF577 - zinc finger protein 577 protein-coding 217237-3 chr7 94838487 94839381 + 439.217 NA Intergenic L1M4c|LINE|L1 -68660 NM_001166160 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding 178586-3 chr11 100484320 100485241 + 439.217 NA Intergenic Intergenic -202508 NM_001367945 143872 Hs.44004 NM_032021 ENSG00000165895 ARHGAP42 AD031|GRAF3|TMEM133 Rho GTPase activating protein 42 protein-coding 213547 chr14 45969332 45970316 + 439.217 NA Intergenic Intergenic -94335 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 195891-2 chr8 139556228 139556939 + 439.217 NA Intergenic Intergenic 146540 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 217412-2 chr6 40612875 40613955 + 439.217 NA Intergenic Intergenic -26051 NM_020737 57497 Hs.250015 NM_020737 ENSG00000156564 LRFN2 FIGLER2|KIAA1246|SALM1 leucine rich repeat and fibronectin type III domain containing 2 protein-coding 202215-4 chr9 112946299 112947575 + 439.217 NA Intergenic Intergenic -56061 NM_033051 57864 Hs.512668 NM_033051 ENSG00000119457 SLC46A2 Ly110|TSCOT solute carrier family 46 member 2 protein-coding 218642-3 chr15 86057027 86058146 + 439.217 NA Intergenic MLT1J1|LTR|ERVL-MaLR -22034 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding 214777 chr2 17394055 17395050 + 439.217 NA Intergenic Intergenic 123888 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding 221190-5 chr8 139535099 139536140 + 439.217 NA Intergenic Intergenic 167504 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 182626-6 chr5 141227046 141228013 + 439.217 NA Intergenic Intergenic 5203 NM_018934 56122 Hs.658497 NM_018934 ENSG00000120327 PCDHB14 PCDH-BETA14 protocadherin beta 14 protein-coding 241218 chr17 68810903 68811948 + 439.217 NA Intergenic Intergenic 143967 NM_001288986 10351 Hs.58351 NM_007168 ENSG00000141338 ABCA8 - ATP binding cassette subfamily A member 8 protein-coding 201600 chr15 87063242 87064010 + 439.217 NA Intergenic Intergenic -75200 NR_135683 102724452 Hs.128062 NR_135683 ENSG00000259620 LOC102724452 - uncharacterized LOC102724452 ncRNA 187721-2 chr12 48471426 48472350 + 439.217 NA promoter-TSS (NM_012404) promoter-TSS (NM_012404) -777 NM_012404 23519 Hs.532658 NM_012404 ENSG00000139223 ANP32D PP32R2 acidic nuclear phosphoprotein 32 family member D protein-coding 229974 chr22 34032478 34033625 + 439.217 NA Intergenic L1MA9|LINE|L1 -110163 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 262037-2 chr12 115939097 115940052 + 439.217 NA Intergenic L1MA4|LINE|L1 209080 NR_030351 693205 NR_030351 ENSG00000207967 MIR620 MIRN620|hsa-mir-620 microRNA 620 ncRNA 209243-2 chr1 116809096 116810128 + 439.217 NA Intergenic Charlie15b|DNA|hAT-Charlie 55182 NM_001767 914 Hs.523500 NM_001767 ENSG00000116824 CD2 LFA-2|SRBC|T11 CD2 molecule protein-coding 205729-3 chr4 87244329 87245250 + 439.217 NA Intergenic L1MB7|LINE|L1 -24171 NM_001292007 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding 192289-9 chr8 88936810 88937579 + 439.217 NA Intergenic MER33|DNA|hAT-Charlie -609711 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 290937-2 chr7 79732128 79733358 + 439.217 NA Intergenic L1M1|LINE|L1 278783 NR_038343 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA 217324 chr8 136069053 136070034 + 439.217 NA Intergenic MER58A|DNA|hAT-Charlie -461255 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 195100-7 chr8 121462129 121462824 + 439.217 NA Intergenic MSTB1|LTR|ERVL-MaLR -176870 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 183856 chr16 82398762 82399519 + 439.217 NA Intergenic L2c|LINE|L2 -227829 NM_001220492 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding 225582-2 chr8 127334421 127335457 + 439.217 NA intron (NR_117099, intron 2 of 3) LTR33|LTR|ERVL -65460 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA 180167-7 chr2 186880842 186881838 + 439.217 NA Intergenic L1MA8|LINE|L1 -32170 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding 206432-3 chr12 132922735 132923722 + 439.217 NA 3' UTR (NM_183238, exon 5 of 5) 3' UTR (NM_183238, exon 5 of 5) 33078 NM_001164715 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding 264584 chr7 88252977 88254045 + 439.217 NA Intergenic L1MA2|LINE|L1 -26518 NM_198901 6717 Hs.489040 NM_003130 ENSG00000075142 SRI CP-22|CP22|SCN|V19 sorcin protein-coding 246137 chr10 45028665 45029656 + 439.217 NA Intergenic Intergenic 28237 NM_006963 7570 Hs.462693 NM_006963 ENSG00000165512 ZNF22 HKR-T1|KOX15|ZNF422|Zfp422 zinc finger protein 22 protein-coding 312898 chr5 149765296 149767052 + 439.217 NA intron (NM_001172698, intron 1 of 10) intron (NM_001172698, intron 1 of 10) -5766 NM_001172699 133522 Hs.483816 NM_133263 ENSG00000155846 PPARGC1B ERRL1|PERC|PGC-1(beta)|PGC1B PPARG coactivator 1 beta protein-coding 298316 chr14 68073587 68075050 + 439.217 NA intron (NM_133509, intron 7 of 10) L1PA15|LINE|L1 250726 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 218379 chr21 35287286 35288320 + 439.217 NA Intergenic L1MA6|LINE|L1 -238505 NM_001754 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding 198262 chr2 37495509 37496343 + 439.217 NA Intergenic L1PA2|LINE|L1 151296 NM_012413 25797 Hs.79033 NM_012413 ENSG00000115828 QPCT GCT|QC|sQC glutaminyl-peptide cyclotransferase protein-coding 287951-2 chr2 114102996 114104119 + 439.217 NA Intergenic L1MB7|LINE|L1 -123573 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA 187809 chr1 74875736 74876551 + 439.217 NA Intergenic L1PB4|LINE|L1 -142735 NM_001130043 1429 Hs.83114 NM_001889 ENSG00000116791 CRYZ - crystallin zeta protein-coding 193607-4 chr11 112443934 112444863 + 439.217 NA Intergenic L1MB4|LINE|L1 -37834 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA 225669 chr20 39350325 39351132 + 439.217 NA Intergenic L1MA9|LINE|L1 -125980 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 251671-3 chr7 64522212 64523366 + 439.217 NA intron (NM_178558, intron 3 of 3) L1MB2|LINE|L1 40282 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding 216183-4 chrX 48058871 48059828 + 439.217 NA exon (NM_001282201, exon 5 of 5) exon (NM_001282201, exon 5 of 5) 3039 NR_046742 100874120 Hs.618606 NR_046742 ZNF630-AS1 - ZNF630 antisense RNA 1 ncRNA 232433-2 chr5 136600577 136601580 + 439.217 NA Intergenic THE1C-int|LTR|ERVL-MaLR -235602 NM_020389 57113 Hs.591263 NM_020389 ENSG00000069018 TRPC7 TRP7 transient receptor potential cation channel subfamily C member 7 protein-coding 217500-4 chr6 147497421 147498577 + 439.217 NA Intergenic Charlie1a|DNA|hAT-Charlie -10691 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 401796 chr14 74752610 74754499 + 439.217 NA Intergenic MLT1J|LTR|ERVL-MaLR -9762 NM_019589 56252 Hs.531111 NM_019589 ENSG00000119596 YLPM1 C14orf170|PPP1R169|ZAP113|ZAP3 YLP motif containing 1 protein-coding 243941-2 chr10 52691947 52692875 + 439.217 NA intron (NR_155748, intron 1 of 2) L1M5|LINE|L1 62993 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA 262915-2 chr4 98400934 98402210 + 439.217 NA intron (NM_021159, intron 6 of 14) HAL1|LINE|L1 140188 NM_001100429 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding 184295-5 chr4 186543348 186544234 + 439.217 NA intron (NM_005958, intron 1 of 1) ERVL-E-int|LTR|ERVL 11776 NM_005958 4543 Hs.243467 NM_005958 ENSG00000168412 MTNR1A MEL-1A-R|MT1 melatonin receptor 1A protein-coding 276619 chr1 171005066 171006218 + 439.217 NA intron (NM_001163629, intron 15 of 21) L1M3a|LINE|L1 70108 NM_025063 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding 208452-6 chr8 134238230 134239284 + 439.217 NA Intergenic L1MD2|LINE|L1 352261 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 233488 chr10 64023912 64025192 + 439.217 NA Intergenic Intergenic -502662 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 179991-3 chr12 130550262 130551021 + 439.217 NA intron (NM_001351226, intron 2 of 21) L1MC4a|LINE|L1 77815 NM_015347 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding 200459-3 chr10 16703197 16704019 + 439.217 NA intron (NM_152724, intron 6 of 7) L1ME4a|LINE|L1 113816 NM_012425 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding 183944-8 chr2 147549350 147550114 + 439.217 NA Intergenic L3|LINE|CR1 -294785 NM_001278580 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding 204587 chr10 43610083 43611313 + 439.217 NA intron (NM_145312, intron 4 of 4) intron (NM_145312, intron 4 of 4) 4260 NM_145312 220992 Hs.147440 NM_145312 ENSG00000198298 ZNF485 - zinc finger protein 485 protein-coding 181660 chr11 31134414 31135345 + 439.217 NA intron (NM_001367979, intron 10 of 38) AluJr|SINE|Alu -142193 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 300512-3 chr8 142365747 142367166 + 439.217 NA intron (NM_001366903, intron 1 of 9) L1MC4a|LINE|L1 36726 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 244380 chr12 34505814 34507022 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 483922 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 524249 chr2 160570930 160573188 + 439.217 NA Intergenic MLT1J|LTR|ERVL-MaLR -78252 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding 261158-3 chr8 103564538 103565595 + 439.217 NA intron (NM_001348497, intron 1 of 22) intron (NM_001348497, intron 1 of 22) -63156 NR_145698 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA 276794 chr3 180778834 180779913 + 439.217 NA intron (NR_109986, intron 4 of 13) L1PA15|LINE|L1 90805 NR_109986 101928882 Hs.734668 NR_109986 ENSG00000285336 LOC101928882 - uncharacterized LOC101928882 ncRNA 189742-2 chr12 39742848 39744039 + 439.217 NA intron (NR_135051, intron 13 of 18) L1MCa|LINE|L1 117260 NM_001319247 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding 206783-5 chr18 77935200 77936060 + 439.217 NA Intergenic L1M4b|LINE|L1 58097 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA 198526-2 chr8 115049012 115049988 + 439.217 NA Intergenic L1MB1|LINE|L1 618513 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 201776-4 chr3 60436430 60437452 + 439.217 NA intron (NM_001320900, intron 6 of 9) intron (NM_001320900, intron 6 of 9) 180929 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA 202040-3 chr18 1187093 1188235 + 439.217 NA Intergenic Intergenic 171965 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 336528-3 chr5 178595200 178596738 + 439.217 NA Intergenic L1MEc|LINE|L1 -5576 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding 211615 chr1 113995982 113997160 + 439.217 NA Intergenic L1M2c|LINE|L1 17097 NM_020190 56944 Hs.9315 NM_020190 ENSG00000116774 OLFML3 HNOEL-iso|OLF44 olfactomedin like 3 protein-coding 321243 chr2 6703109 6704702 + 439.217 NA Intergenic L1MB7|LINE|L1 -53386 NR_110497 102800314 Hs.258100 NR_110497 ENSG00000236172 MIR7515HG - MIR7515 host gene ncRNA 227602-5 chr6 165005198 165006536 + 439.217 NA Intergenic L1MCc|LINE|L1 -183804 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA 183505-7 chr4 91051483 91052488 + 439.217 NA intron (NM_001145065, intron 9 of 10) intron (NM_001145065, intron 9 of 10) 816954 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding 239461-3 chr7 398984 400239 + 439.217 NA Intergenic L1MEc|LINE|L1 20186 NR_033960 442497 Hs.704269 NR_033960 ENSG00000249574 LOC442497 - uncharacterized LOC442497 ncRNA 215831-2 chr1 246829255 246830304 + 439.217 NA Intergenic Intergenic 40162 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA 438602 chr5 89199982 89201923 + 439.217 NA intron (NR_136219, intron 6 of 9) MamRTE1|LINE|RTE-BovB -296847 NM_001193347 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding 190093-2 chr14 62832694 62833608 + 439.217 NA intron (NM_139318, intron 8 of 10) L1MB1|LINE|L1 212307 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 197648-2 chr10 116898515 116899272 + 439.217 NA intron (NM_018330, intron 14 of 14) intron (NM_018330, intron 14 of 14) -49171 NM_001330164 259217 Hs.648448 NM_025015 ENSG00000165868 HSPA12A - heat shock protein family A (Hsp70) member 12A protein-coding 383875 chr8 80943189 80945083 + 439.217 NA Intergenic MSTB2|LTR|ERVL-MaLR -69355 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding 259841 chr17 53308054 53309067 + 439.217 NA Intergenic L1M3|LINE|L1 323055 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding 248772 chr10 66229448 66230413 + 439.217 NA intron (NM_001127384, intron 13 of 17) L1MA5|LINE|L1 658505 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 200458 chr11 15266445 15267234 + 439.217 NA Intergenic Intergenic 117737 NM_001278316 387755 Hs.591997 NM_001031853 ENSG00000188487 INSC - INSC spindle orientation adaptor protein protein-coding 195715-4 chr22 49702257 49703072 + 439.217 NA Intergenic Intergenic -45145 NR_110523 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding 194397-5 chrUn_KI270442v1 29364 30162 + 439.217 NA NA (TGGAA)n|Simple_repeat|Simple_repeat NA NA 345049 chr14 71246277 71247610 + 439.217 NA Intergenic AluJo|SINE|Alu -73533 NM_001354286 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 226987-2 chr8 125944859 125945701 + 439.217 NA non-coding (NR_038446, exon 2 of 2) non-coding (NR_038446, exon 2 of 2) 5917 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 177971 chr14 61121590 61122576 + 439.217 NA Intergenic Charlie20a|DNA|hAT-Charlie -140393 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding 208979-4 chr6 142283989 142284813 + 439.217 NA Intergenic L1M4a1|LINE|L1 -17518 NM_001032394 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding 261334-3 chr8 139554205 139555462 + 439.217 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 148290 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 198263-2 chr16 50417285 50418238 + 439.217 NA Intergenic L1MB4|LINE|L1 -22628 NR_146572 105371248 NR_146572 ENSG00000261092 LINC02178 - long intergenic non-protein coding RNA 2178 ncRNA 200019-2 chr5 45928774 45929766 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -232890 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 256942 chr5 51262759 51263821 + 439.217 NA Intergenic (TCTA)n|Simple_repeat|Simple_repeat 120042 NR_046243 642366 Hs.544139 NR_046243 LOC642366 - uncharacterized LOC642366 ncRNA 253428 chr18 78890156 78891230 + 439.217 NA Intergenic MLT1E|LTR|ERVL-MaLR -89582 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding 399775 chr6 160192847 160194574 + 439.217 NA Intergenic L1MA5A|LINE|L1 65111 NM_003058 6582 Hs.436385 NM_003058 ENSG00000112499 SLC22A2 OCT2 solute carrier family 22 member 2 protein-coding 219696 chr17 73728206 73729196 + 439.217 NA Intergenic AluJb|SINE|Alu -9153 NM_001278587 100134391 Hs.694655 NM_001278587 LOC100134391 - uncharacterized LOC100134391 protein-coding 232170-6 chr8 54817321 54818656 + 439.217 NA Intergenic Intergenic 201892 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding 210034-2 chr10 111710517 111711703 + 439.217 NA Intergenic MIR|SINE|MIR 472655 NM_020918 57678 Hs.42586 NM_020918 ENSG00000119927 GPAM GPAT|GPAT1 glycerol-3-phosphate acyltransferase, mitochondrial protein-coding 197823 chr5 40958551 40959397 + 439.217 NA intron (NM_000587, intron 11 of 17) intron (NM_000587, intron 11 of 17) 49477 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding 200722 chr1 80600491 80601308 + 439.217 NA intron (NR_125940, intron 2 of 3) L1MB1|LINE|L1 -40388 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 246664-8 chr8 88631943 88633052 + 439.217 NA Intergenic Intergenic -305014 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 336791 chr6 53212648 53214005 + 439.217 NA Intergenic MER57E1|LTR|ERV1 -63667 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA 193958-8 chr5 115293124 115294257 + 439.217 NA intron (NM_001040440, intron 1 of 9) MLT1D|LTR|ERVL-MaLR 2600 NM_152549 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding 292958 chr7 6695686 6696924 + 439.217 NA intron (NM_006956, intron 4 of 5) intron (NM_006956, intron 4 of 5) 10642 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 236826-2 chr5 18497842 18498773 + 439.217 NA Intergenic Intergenic 691033 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 332487 chr8 117346035 117347598 + 439.217 NA Intergenic L1MA9|LINE|L1 -173897 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 205202-9 chr22 34059532 34060473 + 439.217 NA Intergenic Intergenic -137114 NM_001362951 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 291904 chr15 61385097 61386749 + 439.217 NA Intergenic Intergenic -156621 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding 272051 chr7 10757054 10758275 + 439.217 NA intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 22280 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA 214426 chr15 69683470 69684434 + 439.217 NA intron (NR_126438, intron 3 of 3) Tigger1|DNA|TcMar-Tigger 91752 NR_126437 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA 182451-7 chr8 122701885 122702824 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR -8248 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA 180430-4 chr16 61800766 61801565 + 439.217 NA intron (NM_001796, intron 7 of 11) intron (NM_001796, intron 7 of 11) 235273 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 187897-4 chr2 106208436 106209284 + 439.217 NA Intergenic Intergenic -14521 NR_045607 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding 178849-3 chr17 54262101 54262917 + 439.217 NA Intergenic Intergenic 439582 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding 272227-2 chr10 104150978 104152285 + 439.217 NA intron (NM_025145, intron 28 of 37) L1PREC2|LINE|L1 29460 NM_001002759 119392 Hs.93667 NM_145247 ENSG00000156384 SFR1 C10orf78|MEI5|MEIR5|bA373N18.1 SWI5 dependent homologous recombination repair protein 1 protein-coding 265550 chr5 15974793 15975792 + 439.217 NA Intergenic L1M4c|LINE|L1 40110 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA 184471-4 chr3 40952470 40953379 + 439.217 NA Intergenic L1MA9|LINE|L1 -246581 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding 181133-2 chr18 3976210 3977122 + 439.217 NA intron (NR_102696, intron 1 of 4) L1ME4c|LINE|L1 14313 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA 182626 chr1 44144548 44145217 + 439.217 NA Intergenic L1M3|LINE|L1 -3251 NM_001358438 105378952 NM_001358438 ENSG00000283039 KLF18 - Kruppel like factor 18 protein-coding 195539-2 chr14 52029451 52030284 + 439.217 NA intron (NM_007361, intron 9 of 21) Tigger19a|DNA|TcMar-Tigger 39192 NM_007361 22795 Hs.369840 NM_007361 ENSG00000087303 NID2 NID-2 nidogen 2 protein-coding 191762-5 chr19 37411518 37412419 + 439.217 NA 3' UTR (NM_001330482, exon 5 of 5) 3' UTR (NM_001330482, exon 5 of 5) 40869 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding 276004-2 chr4 31342094 31343538 + 439.217 NA Intergenic L1MB7|LINE|L1 -163728 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA 200634-6 chr7 50933145 50934076 + 439.217 NA Intergenic Intergenic -140157 NM_001371008 185086-4 chr4 59478786 59479457 + 439.217 NA Intergenic L1MB1|LINE|L1 465548 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 228744-3 chr5 46304926 46306269 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -609217 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 295769 chr11 50514223 50515733 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 105831 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 185086-2 chr12 20957271 20958098 + 439.217 NA intron (NM_001371097, intron 13 of 15) L1PA10|LINE|L1 -58012 NM_001009562 338821 Hs.729117 NM_001009562 ENSG00000205754 SLCO1B7 LST-3|LST-3TM12|LST3|SLC21A21 solute carrier organic anion transporter family member 1B7 (putative) protein-coding 200898-3 chr20 42311365 42312463 + 439.217 NA intron (NM_133170, intron 12 of 31) L1M6|LINE|L1 -373569 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 182890-5 chr21 30907892 30908737 + 439.217 NA Intergenic L1MA7|LINE|L1 -26734 NM_175858 337880 Hs.407654 NM_175858 ENSG00000182591 KRTAP11-1 HACL-1|HACL1|KAP11.1 keratin associated protein 11-1 protein-coding 485071 chr15 80329517 80331956 + 439.217 NA intron (NR_033833, intron 1 of 2) L1ME4a|LINE|L1 11069 NR_033833 283688 Hs.525933 NR_033833 ENSG00000259361 LINC00927 - long intergenic non-protein coding RNA 927 ncRNA 277936 chr10 85089456 85090689 + 439.217 NA Intergenic L1MB1|LINE|L1 108833 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 211790 chr10 41723430 41724312 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 644174 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 235596-5 chr5 178708199 178709252 + 439.217 NA Intergenic Intergenic 21934 NM_005649 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding 280220-2 chr11 98129745 98131032 + 439.217 NA Intergenic Intergenic -890561 NM_001243271 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 178058-3 chr7 98549819 98550581 + 439.217 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -67085 NM_002523 4885 Hs.3281 NM_002523 ENSG00000106236 NPTX2 NARP|NP-II|NP2 neuronal pentraxin 2 protein-coding 320716-3 chr19 37633755 37635360 + 439.217 NA 3' UTR (NM_001320671, exon 6 of 6) 3' UTR (NM_001320671, exon 6 of 6) 20908 NM_014898 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 252286-3 chr8 129348199 129349060 + 439.217 NA Intergenic L1MEf|LINE|L1 -107389 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 185701 chr1 71132294 71133157 + 439.217 NA intron (NR_046217, intron 2 of 3) L1MA9|LINE|L1 51401 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA 281714 chr21 45046810 45048410 + 439.217 NA Intergenic L1M7|LINE|L1 25601 NR_027292 728039 Hs.309203 NM_032653 ENSG00000235374 SSR4P1 C21orf122|PRED57|PRED90 signal sequence receptor subunit 4 pseudogene 1 pseudo 193607-2 chr10 39322170 39322958 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 625968 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 202128-2 chr16 20552569 20553728 + 439.217 NA intron (NM_182617, intron 6 of 14) intron (NM_182617, intron 6 of 14) 23219 NM_182617 348158 Hs.298252 NM_182617 ENSG00000066813 ACSM2B ACSM2|HXMA|HYST1046 acyl-CoA synthetase medium chain family member 2B protein-coding 228129-2 chr20 47995469 47996554 + 439.217 NA Intergenic L1MC1|LINE|L1 -5894 NR_110027 101927457 Hs.445823 NR_110027 LINC01522 - long intergenic non-protein coding RNA 1522 ncRNA 296647 chr1 227662587 227663955 + 439.217 NA TTS (NM_001367910) TTS (NM_001367910) 34436 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 281011-3 chr3 170939939 170941208 + 439.217 NA Intergenic Intergenic -31936 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding 205202-8 chr2 154564129 154564855 + 439.217 NA Intergenic L1MA4|LINE|L1 -107054 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA 207837-4 chr15 26473683 26474726 + 439.217 NA Intergenic MER4D|LTR|ERV1 154886 NM_001191321 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding 195452-4 chr4 127750134 127751036 + 439.217 NA intron (NM_001318467, intron 2 of 6) L1MA7|LINE|L1 20185 NM_031291 83447 Hs.149030 NM_031291 ENSG00000151475 SLC25A31 AAC4|ANT 4|ANT4|SFEC35kDa solute carrier family 25 member 31 protein-coding 243063-2 chr15 62154708 62155895 + 439.217 NA Intergenic Intergenic 9984 NM_001007595 388125 Hs.144372 NM_001007595 ENSG00000205502 C2CD4B FAM148B|NLF2 C2 calcium dependent domain containing 4B protein-coding 309121-2 chr2 29301097 29302164 + 439.217 NA intron (NM_004304, intron 8 of 28) intron (NM_004304, intron 8 of 28) -77730 NM_001353765 238 Hs.654469 NM_004304 ENSG00000171094 ALK CD246|NBLST3 ALK receptor tyrosine kinase protein-coding 241921 chr8 131593283 131594597 + 439.217 NA Intergenic Intergenic -310153 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 200107 chr5 123627632 123628439 + 439.217 NA Intergenic L1MA8|LINE|L1 82618 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 208277-3 chr20 39305862 39306854 + 439.217 NA Intergenic LTR16E2|LTR|ERVL -81610 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 279342 chr14 50455995 50457172 + 439.217 NA exon (NM_006575, exon 14 of 32) exon (NM_006575, exon 14 of 32) -59285 NM_001367064 8814 Hs.280881 NM_004196 ENSG00000100490 CDKL1 KKIALRE|P42 cyclin dependent kinase like 1 protein-coding 184559-4 chr2 89781781 89782730 + 439.217 NA Intergenic Intergenic -144348 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 247455 chr8 88662403 88663468 + 439.217 NA Intergenic L1MEf|LINE|L1 -335452 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 181221-5 chr19 52419477 52420437 + 439.217 NA Intergenic LTR52|LTR|ERVL -9191 NM_001351679 147658 Hs.447583 NM_182512 ENSG00000198633 ZNF534 KRBO3 zinc finger protein 534 protein-coding 217676-3 chr5 67702100 67703027 + 439.217 NA Intergenic L1MC3|LINE|L1 -55774 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA 229886-2 chr17 62910626 62911663 + 439.217 NA Intergenic LTR33B|LTR|ERVL -33071 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA 216095-3 chr11 50380295 50381042 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -28479 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 226812-2 chr14 66586736 66587769 + 439.217 NA intron (NM_001024218, intron 1 of 21) L1MA8|LINE|L1 79845 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 194573-2 chr2 57653936 57654852 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR -253257 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 254482-2 chr14 72818701 72819803 + 439.217 NA intron (NM_001280542, intron 1 of 10) L1ME2|LINE|L1 73397 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 420067 chr2 108223203 108224982 + 439.217 NA Intergenic MER61-int|LTR|ERV1 -6251 NR_131251 102724774 Hs.626744 NR_131251 ENSG00000225328 LINC01594 TCONS_l2_00015893 long intergenic non-protein coding RNA 1594 ncRNA 177444-4 chr2 160765464 160766490 + 439.217 NA Intergenic Intergenic -272170 NM_002897 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding 344697 chr18 13948761 13950195 + 439.217 NA Intergenic L1ME1|LINE|L1 -33771 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding 232521-2 chr3 96053524 96055039 + 439.217 NA Intergenic MSTA|LTR|ERVL-MaLR -305683 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA 198702-5 chr7 80169352 80170333 + 439.217 NA intron (NM_001256414, intron 1 of 7) L1MB8|LINE|L1 34058 NM_001256414 2770 Hs.134587 NM_002069 ENSG00000127955 GNAI1 Gi G protein subunit alpha i1 protein-coding 253780 chr19 9380949 9382124 + 439.217 NA exon (NM_003451, exon 9 of 9) exon (NM_003451, exon 9 of 9) 5220 NM_001172651 7730 Hs.728944 NM_003451 ENSG00000188629 ZNF177 PIGX zinc finger protein 177 protein-coding 211790-7 chr8 105235082 105236292 + 439.217 NA Intergenic L1MDa|LINE|L1 -82751 NM_012082 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 187370-2 chr11 76274142 76275367 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR -68252 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding 240252 chr2 95188059 95188985 + 439.217 NA Intergenic Intergenic 22713 NM_001017396 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding 340305 chr7 62780689 62782265 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 522579 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 257293 chr10 30770276 30771181 + 439.217 NA Intergenic MLT1H1|LTR|ERVL-MaLR 47509 NR_134497 105376480 Hs.461867 NR_134497 ENSG00000230720 LINC02644 - long intergenic non-protein coding RNA 2644 ncRNA 300512 chr16 73746845 73748497 + 439.217 NA Intergenic (TATATG)n|Simple_repeat|Simple_repeat 360866 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 195803-4 chr19 36865687 36866653 + 439.217 NA intron (NM_001242476, intron 3 of 3) L1M5|LINE|L1 14519 NM_001242476 25850 Hs.362324 NM_003419 ENSG00000251247 ZNF345 HZF10 zinc finger protein 345 protein-coding 197999-2 chr7 88031104 88031940 + 439.217 NA intron (NM_001324421, intron 3 of 28) MSTA-int|LTR|ERVL-MaLR 97271 NM_021723 53616 Hs.256398 NM_004194 ENSG00000008277 ADAM22 ADAM 22|EIEE61|MDC2 ADAM metallopeptidase domain 22 protein-coding 188688-5 chr9 138080667 138081383 + 439.217 NA intron (NM_001243812, intron 35 of 45) Charlie20a|DNA|hAT-Charlie -35954 NR_121582 101928786 Hs.678847 NR_121582 LOC101928786 - uncharacterized LOC101928786 ncRNA 233576 chr4 76316450 76317798 + 439.217 NA intron (NM_001042784, intron 23 of 23) L1PB1|LINE|L1 11098 NM_003943 8987 Hs.109590 NM_003943 ENSG00000118804 STBD1 GENEX3414|GENX-3414 starch binding domain 1 protein-coding 286721-2 chr2 95217419 95218754 + 439.217 NA Intergenic MLT1B-int|LTR|ERVL-MaLR 52277 NM_001017396 7549 Hs.590916 NM_021088 ENSG00000275111 ZNF2 A1-5|ZNF661|Zfp661 zinc finger protein 2 protein-coding 189302-3 chr14 25331403 25332163 + 439.217 NA Intergenic L1MA4A|LINE|L1 -281486 NM_001351942 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding 207047-4 chr2 63206568 63207449 + 439.217 NA intron (NR_148705, intron 13 of 16) L1MB2|LINE|L1 -87466 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 205378 chr11 79526868 79527728 + 439.217 NA Intergenic L1MB5|LINE|L1 -86268 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding 197384-2 chr15 27625868 27626678 + 439.217 NA Intergenic L1M5|LINE|L1 -464954 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 181221 chr1 175636697 175637363 + 439.217 NA intron (NM_003285, intron 1 of 22) intron (NM_003285, intron 1 of 22) 106565 NM_003285 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding 221980-3 chr2 161481331 161482111 + 439.217 NA Intergenic L1MA5A|LINE|L1 26181 NR_077058 285116 Hs.470435 NR_077058 AHCTF1P1 AHCTF1P|ELYS-like AT-hook containing transcription factor 1 pseudogene 1 pseudo 231467-4 chr7 46299360 46300804 + 439.217 NA Intergenic L1MDa|LINE|L1 -378810 NM_000598 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 205817-4 chr5 44155583 44156876 + 439.217 NA Intergenic MER61-int|LTR|ERV1 -232503 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 275213 chr12 37938991 37940455 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -377051 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 191762-4 chr19 29361490 29362194 + 439.217 NA intron (NR_040029, intron 9 of 9) L1MA8|LINE|L1 -148691 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 264409-2 chr2 31762319 31763354 + 439.217 NA Intergenic L1MC5|LINE|L1 41144 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 211088-2 chr6 124732403 124733398 + 439.217 NA intron (NM_001040214, intron 4 of 6) L1MC3|LINE|L1 -229645 NR_136734 154214 Hs.12876 NM_152553 ENSG00000146373 RNF217 C6orf172|IBRDC1|OSTL|dJ84N20.1 ring finger protein 217 protein-coding 205553-5 chr5 4237036 4237803 + 439.217 NA Intergenic Intergenic -536062 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 248509 chr1 213563350 213564539 + 439.217 NA Intergenic L1MEd|LINE|L1 -360805 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA 242711-2 chr12 37929578 37930797 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -386587 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 187282-2 chr14 20097866 20098512 + 439.217 NA Intergenic Intergenic -19279 NM_001004715 390436 NM_001004715 ENSG00000176230 OR4K17 OR14-29 olfactory receptor family 4 subfamily K member 17 protein-coding 215041-5 chr5 61894597 61895431 + 439.217 NA Intergenic Intergenic -159316 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA 236387 chr1 80738463 80739630 + 439.217 NA Intergenic L1MA3|LINE|L1 97759 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 296823 chr17 41138543 41139664 + 439.217 NA TTS (NM_030976) TTS (NM_030976) 1384 NM_030976 81871 Hs.307014 NM_030976 ENSG00000198090 KRTAP4-6 KAP4.15|KAP4.6|KRTAP4-15|KRTAP4.15 keratin associated protein 4-6 protein-coding 247631 chrX 83297083 83298260 + 439.217 NA Intergenic L1PREC2|LINE|L1 -210619 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding 189215-6 chr3 25991809 25992604 + 439.217 NA Intergenic LTR43|LTR|ERV1 -118511 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA 205378-9 chr3 5657382 5658588 + 439.217 NA Intergenic Intergenic -407730 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 196857-3 chr7 46963192 46964031 + 439.217 NA Intergenic L1MB5|LINE|L1 -266489 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 209507 chr4 155271274 155272482 + 439.217 NA Intergenic L1MEc|LINE|L1 63242 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding 230501-3 chr8 62807412 62808611 + 439.217 NA intron (NM_001304533, intron 4 of 6) intron (NM_001304533, intron 4 of 6) -169850 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA 177268 chr2 200601966 200602608 + 439.217 NA exon (NM_001159, exon 6 of 35) exon (NM_001159, exon 6 of 35) 16273 NM_001159 316 Hs.406238 NM_001159 ENSG00000138356 AOX1 AO|AOH1 aldehyde oxidase 1 protein-coding 224352 chr5 45345724 45346737 + 439.217 NA intron (NM_021072, intron 5 of 7) THE1C|LTR|ERVL-MaLR 350150 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 230677-4 chr5 92434499 92435650 + 439.217 NA Intergenic L1ME3A|LINE|L1 -1051757 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 279342-4 chr8 137385656 137386695 + 439.217 NA Intergenic Intergenic 27413 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 179288-2 chr13 100794020 100794758 + 439.217 NA intron (NR_047687, intron 2 of 7) LTR24|LTR|ERV1 86064 NR_047687 100885778 Hs.602949 NR_047687 ENSG00000233009 NALCN-AS1 - NALCN antisense RNA 1 ncRNA 249563 chr14 66793219 66794227 + 439.217 NA intron (NM_001024218, intron 3 of 21) L1M4b|LINE|L1 286316 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 206432-6 chr5 178955004 178955947 + 439.217 NA intron (NM_001178089, intron 4 of 4) L1MEc|LINE|L1 14277 NM_001323310 285676 Hs.259441 NM_182594 ENSG00000178187 ZNF454 - zinc finger protein 454 protein-coding 242711-6 chr4 32729051 32730166 + 439.217 NA Intergenic L1MA5|LINE|L1 378570 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 237353-3 chr4 106439224 106440351 + 439.217 NA intron (NR_147150, intron 2 of 3) L1MD2|LINE|L1 6163 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA 205202 chr1 37222084 37222942 + 439.217 NA Intergenic L1MB2|LINE|L1 60950 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA 306573 chr19 24339928 24341093 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -177063 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 418486 chr14 61956572 61958509 + 439.217 NA intron (NM_001367663, intron 1 of 7) L1MA10|LINE|L1 29845 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 432981 chr11 97274030 97276614 + 439.217 NA Intergenic L1M2|LINE|L1 766897 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 223561-3 chr8 138269179 138270262 + 439.217 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) -186175 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 205466-5 chr4 65102511 65103573 + 439.217 NA Intergenic Intergenic -98542 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA 253867 chr17 58801964 58803229 + 439.217 NA intron (NM_014906, intron 1 of 6) L1M3|LINE|L1 46727 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding 190708 chr1 41756077 41756775 + 439.217 NA intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 162496 NM_001127714 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 352340 chr11 13196937 13198467 + 439.217 NA Intergenic L1PA16|LINE|L1 -78950 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding 269416-2 chr8 131301793 131303134 + 439.217 NA Intergenic L1PB4|LINE|L1 -261554 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 244468 chr1 113524685 113525732 + 439.217 NA intron (NM_001142782, intron 1 of 20) L1MC4|LINE|L1 134693 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 178322-6 chr5 5967814 5968516 + 439.217 NA Intergenic Intergenic 369127 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 242360-3 chr7 54036722 54037725 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR -225292 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 179903-2 chr21 27551783 27552643 + 439.217 NA Intergenic THE1B-int|LTR|ERVL-MaLR -170166 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 210912 chr16 8441679 8442672 + 439.217 NA Intergenic MIRc|SINE|MIR 147663 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 194222 chr10 120697538 120698518 + 439.217 NA Intergenic L1MA6|LINE|L1 100079 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA 222859 chr11 11202929 11204047 + 439.217 NA Intergenic L1M7|LINE|L1 149762 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding 283910-3 chr9 6159908 6161091 + 439.217 NA Intergenic L1MEd|LINE|L1 -54650 NM_001314047 90865 Hs.731660 NM_033439 ENSG00000137033 IL33 C9orf26|DVS27|IL1F11|NF-HEV|NFEHEV interleukin 33 protein-coding 186228-2 chr11 112918885 112919541 + 439.217 NA Intergenic Intergenic -42207 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding 209858-5 chr9 134613523 134614430 + 439.217 NA Intergenic L1ME3|LINE|L1 -27829 NM_000093 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding 263179-2 chr2 136477947 136478973 + 439.217 NA Intergenic L1M2a1|LINE|L1 -287085 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 207310 chr12 10645613 10646966 + 439.217 NA intron (NM_018423, intron 1 of 10) THE1B-int|LTR|ERVL-MaLR 27763 NM_018423 55359 Hs.24979 NM_018423 ENSG00000060140 STYK1 NOK|SuRTK106 serine/threonine/tyrosine kinase 1 protein-coding 224088-2 chr8 14819105 14820069 + 439.217 NA intron (NM_139167, intron 1 of 7) L1MA6|LINE|L1 33923 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA 206432-8 chr7 54264611 54265500 + 439.217 NA Intergenic Intergenic -65642 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 284173 chr4 30405238 30406607 + 439.217 NA Intergenic Intergenic -314447 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 286545 chr8 72375444 72376573 + 439.217 NA Intergenic L1PA15-16|LINE|L1 -124374 NR_033867 392232 Hs.454043 NR_033867 LOC392232 - transient receptor potential cation channel subfamily A member 1 pseudogene pseudo 178410-2 chr10 30202022 30202923 + 439.217 NA Intergenic L1M5|LINE|L1 -9380 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA 209155-3 chr7 42984356 42985364 + 439.217 NA Intergenic Tigger1|DNA|TcMar-Tigger 52484 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding 208716-5 chr5 171603767 171604502 + 439.217 NA Intergenic L1ME3F|LINE|L1 -181738 NM_001289970 644994 Hs.591740 NM_001289970 ENSG00000185662 SMIM23 C5orf50 small integral membrane protein 23 protein-coding 306925-2 chr5 46063704 46065050 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -367997 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 222507-2 chr2 56845282 56846174 + 439.217 NA Intergenic L2|LINE|L2 -659958 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 191938-2 chr17 60964570 60965532 + 439.217 NA intron (NM_001330413, intron 14 of 25) L1MA4|LINE|L1 287200 NM_001320470 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 374213 chr10 117211428 117213001 + 439.217 NA Intergenic L1M1|LINE|L1 14725 NM_181840 338567 Hs.449650 NM_181840 ENSG00000186795 KCNK18 K2p18.1|MGR13|TRESK|TRESK-2|TRESK2|TRIK potassium two pore domain channel subfamily K member 18 protein-coding 345576-3 chr7 64473345 64475112 + 439.217 NA Intergenic AluSq2|SINE|Alu 40535 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo 302269-2 chr8 122114089 122115334 + 439.217 NA Intergenic Intergenic 453933 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 192992 chr10 48850074 48850912 + 439.217 NA intron (NM_020945, intron 39 of 61) intron (NM_020945, intron 39 of 61) 63742 NM_001006939 474354 Hs.202438 NM_001006939 ENSG00000165383 LRRC18 UNQ933|UNQ9338|VKGE9338 leucine rich repeat containing 18 protein-coding 202655-5 chr21 28585143 28586202 + 439.217 NA Intergenic L1MEd|LINE|L1 46354 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA 195539-9 chr9 93983883 93984877 + 439.217 NA Intergenic L1PA16|LINE|L1 28546 NR_144455 101928040 Hs.375820 NR_144455 ENSG00000235601 BARX1-DT BARX1-AS1 BARX1 divergent transcript ncRNA 192641-5 chr5 5853560 5854510 + 439.217 NA Intergenic Intergenic 431358 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding 286370 chr2 40061196 40062924 + 439.217 NA intron (NR_038441, intron 2 of 4) intron (NR_038441, intron 2 of 4) 144426 NR_038441 100128590 Hs.744988 NR_038441 ENSG00000227028 SLC8A1-AS1 - SLC8A1 antisense RNA 1 ncRNA 193870-5 chr8 46542358 46543211 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 74859 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 199844-3 chr9 137853266 137854130 + 439.217 NA Intergenic L1M2|LINE|L1 15279 NR_030333 693187 NR_030333 ENSG00000207693 MIR602 MIRN602|hsa-mir-602 microRNA 602 ncRNA 207662-2 chr12 133058763 133059709 + 439.217 NA 3' UTR (NM_003428, exon 5 of 5) 3' UTR (NM_003428, exon 5 of 5) -20967 NM_003440 7699 Hs.181552 NM_003440 ENSG00000196387 ZNF140 pHZ-39 zinc finger protein 140 protein-coding 205993-3 chr6 61780034 61781254 + 439.217 NA intron (NR_146874, intron 6 of 13) intron (NR_146874, intron 6 of 13) 206514 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 177268-5 chr6 145478182 145479263 + 439.217 NA Intergenic L1ME3F|LINE|L1 208155 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding 243853 chr10 76315548 76317148 + 439.217 NA intron (NM_001305581, intron 5 of 6) MER52A|LTR|ERV1 533587 NM_032024 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 198350-5 chr7 42332793 42333792 + 439.217 NA Intergenic L1MB8|LINE|L1 -96083 NM_000168 2737 Hs.21509 NM_000168 ENSG00000106571 GLI3 ACLS|GCPS|GLI3-190|GLI3FL|PAP-A|PAPA|PAPA1|PAPB|PHS|PPDIV GLI family zinc finger 3 protein-coding 186492-2 chr20 42374073 42374918 + 439.217 NA intron (NM_133170, intron 9 of 31) intron (NM_133170, intron 9 of 31) -310988 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 193870-6 chr8 124820902 124821832 + 439.217 NA promoter-TSS (NR_039806) promoter-TSS (NR_039806) -618 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA 231379-4 chr7 92899276 92900294 + 439.217 NA intron (NR_110087, intron 2 of 2) L1MB8|LINE|L1 -63158 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding 232961-2 chr13 20448117 20449226 + 439.217 NA intron (NM_015974, intron 3 of 7) L1MCa|LINE|L1 -14825 NR_039721 100616304 NR_039721 ENSG00000263978 MIR4499 - microRNA 4499 ncRNA 211966-2 chr3 27868971 27869938 + 439.217 NA Intergenic L1MA8|LINE|L1 -35318 NR_132438 100996624 Hs.275746 NR_132438 ENSG00000229243 LINC01981 - long intergenic non-protein coding RNA 1981 ncRNA 208277-2 chr2 128885298 128886421 + 439.217 NA Intergenic L1MB7|LINE|L1 21259 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 336879 chr16 81337980 81339558 + 439.217 NA intron (NM_022041, intron 1 of 10) intron (NM_022041, intron 1 of 10) 23803 NM_022041 8139 Hs.112569 NM_022041 ENSG00000261609 GAN GAN1|KLHL16 gigaxonin protein-coding 199492-2 chr19 37665565 37666635 + 439.217 NA Intergenic Intergenic -9839 NM_001320668 22835 Hs.668737 NM_014898 ENSG00000120784 ZFP30 ZNF745 ZFP30 zinc finger protein protein-coding 246225 chr7 62973762 62974659 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 329846 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 183505-6 chr20 43804368 43805303 + 439.217 NA Intergenic L1MB7|LINE|L1 -77833 NM_001008901 149699 Hs.447626 NM_176791 ENSG00000124196 GTSF1L C20orf65|FAM112A|dJ1028D15.4 gametocyte specific factor 1 like protein-coding 193870-2 chr2 191901175 191901910 + 439.217 NA Intergenic THE1B-int|LTR|ERVL-MaLR -54454 NM_004657 8436 Hs.26530 NM_004657 ENSG00000168497 CAVIN2 PS-p68|SDPR|SDR|cavin-2 caveolae associated protein 2 protein-coding 230150 chr11 50464405 50465452 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 55781 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 185262-2 chr12 126687175 126687984 + 439.217 NA intron (NR_110034, intron 1 of 2) L1PB1|LINE|L1 2739 NR_110035 100996671 Hs.121392 NR_110034 ENSG00000256732 LOC100996671 - uncharacterized LOC100996671 ncRNA 207135-8 chr9 9266298 9267613 + 439.217 NA intron (NM_002839, intron 9 of 45) L1MA9|LINE|L1 408937 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA 177268-4 chr5 7010798 7011754 + 439.217 NA Intergenic Intergenic -183355 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA 181660-3 chr2 79657617 79658619 + 439.217 NA intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -8759 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA 215831-3 chr12 38015279 38016093 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -301088 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 281362-2 chr3 114635984 114636953 + 439.217 NA intron (NM_001348803, intron 6 of 13) L1M4c|LINE|L1 -11523 NM_001164346 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding 179025-3 chr2 210511288 210512160 + 439.217 NA intron (NM_001122633, intron 1 of 38) intron (NM_001122633, intron 1 of 38) -7994 NM_001369256 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 201688-3 chr17_GL000205v2_random 13485 14347 + 439.217 NA Intergenic CER|Satellite|Satellite 44050 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 201952-5 chr2 137534736 137535531 + 439.217 NA intron (NM_001316349, intron 15 of 27) intron (NM_001316349, intron 15 of 27) 392799 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA 202742-4 chr3 51173345 51174149 + 439.217 NA intron (NM_004947, intron 12 of 52) L1MA9|LINE|L1 -211544 NM_006010 7873 Hs.436446 NM_006010 ENSG00000145050 MANF ARMET|ARP mesencephalic astrocyte derived neurotrophic factor protein-coding 345312 chr4 55283114 55284525 + 439.217 NA Intergenic L1MA9|LINE|L1 -62423 NM_024592 79644 Hs.39311 NM_024592 ENSG00000128039 SRD5A3 CDG1P|CDG1Q|KRIZI|SRD5A2L|SRD5A2L1 steroid 5 alpha-reductase 3 protein-coding 180430-10 chr8 135068321 135069141 + 439.217 NA Intergenic HAL1|LINE|L1 -165400 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 401796-2 chr3 25494259 25496022 + 439.217 NA intron (NR_110892, intron 2 of 6) intron (NR_110892, intron 2 of 6) 36830 NM_001290217 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding 189390-2 chr3 83929209 83930126 + 439.217 NA Intergenic MER61-int|LTR|ERV1 939908 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 245874 chr14 81877179 81878345 + 439.217 NA Intergenic L1MCa|LINE|L1 -134624 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 279693-3 chr6 160312334 160313807 + 439.217 NA Intergenic L1M3e|LINE|L1 -35308 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding 242184-5 chr8 129769580 129770842 + 439.217 NA intron (NM_031415, intron 3 of 13) L1MA9|LINE|L1 16413 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 178586-5 chr19 53214359 53215104 + 439.217 NA non-coding (NR_073396, exon 1 of 1) non-coding (NR_073396, exon 1 of 1) 1783 NR_073396 390963 Hs.444446 NM_001001675 ZNF818P ZNF818 zinc finger protein 818, pseudogene pseudo 194485-4 chr5 153940165 153941036 + 439.217 NA Intergenic MER4B|LTR|ERV1 -41613 NR_146729 105378238 Hs.590229 NR_146729 ENSG00000251183 LINC01861 - long intergenic non-protein coding RNA 1861 ncRNA 248685 chr2 83759827 83761132 + 439.217 NA Intergenic L1MA5|LINE|L1 237665 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA 210121-5 chr9 90651654 90652597 + 439.217 NA Intergenic L1MB3|LINE|L1 -9301 NM_017594 54769 Hs.165636 NM_017594 ENSG00000165023 DIRAS2 Di-Ras2 DIRAS family GTPase 2 protein-coding 196945-7 chr6 78744334 78745339 + 439.217 NA Intergenic L1MA4A|LINE|L1 -122715 NM_001010844 134728 Hs.656212 NM_001010844 ENSG00000146243 IRAK1BP1 AIP70|SIMPL interleukin 1 receptor associated kinase 1 binding protein 1 protein-coding 211263-3 chr8 123875409 123876301 + 439.217 NA intron (NM_001039112, intron 1 of 40) L2a|LINE|L2 23868 NM_001039112 654463 Hs.632058 NM_001039112 ENSG00000214814 FER1L6 C8ORFK23 fer-1 like family member 6 protein-coding 200634 chr15 69709095 69709923 + 439.217 NA Intergenic MIRc|SINE|MIR 117309 NR_126437 104472713 Hs.430824 NR_126437 ENSG00000245750 PCAT29 - prostate cancer associated transcript 29 ncRNA 269503 chr10 62346212 62347234 + 439.217 NA intron (NR_104162, intron 3 of 3) L1M4|LINE|L1 -27434 NM_199450 22891 Hs.22653 NM_014951 ENSG00000138311 ZNF365 Su48|UAN|ZNF365D zinc finger protein 365 protein-coding 215304-2 chr12 111072319 111073273 + 439.217 NA intron (NM_015267, intron 1 of 21) intron (NM_015267, intron 1 of 21) -27208 NM_001370598 23316 Hs.124953 NM_015267 ENSG00000111249 CUX2 CDP2|CUTL2|EIEE67 cut like homeobox 2 protein-coding 323527 chrUn_KI270442v1 96811 98358 + 439.217 NA NA ALR/Alpha|Satellite|centr NA NA 186404-5 chr4 67287382 67288272 + 439.217 NA Intergenic L2a|LINE|L2 134173 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA 280220-3 chr8 116274980 116276268 + 439.217 NA intron (NR_046215, intron 1 of 13) L1PA16|LINE|L1 49435 NR_046215 100859921 Hs.552281 NR_046215 ENSG00000249917 LINC00536 - long intergenic non-protein coding RNA 536 ncRNA 181748-4 chr18 22657289 22658003 + 439.217 NA Intergenic L1PA15-16|LINE|L1 129191 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 181484 chr11 111029219 111030158 + 439.217 NA Intergenic L1PB3|LINE|L1 67630 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA 370348 chr5 131245033 131246855 + 439.217 NA Intergenic L1M7|LINE|L1 -18065 NM_001038702 56990 Hs.508829 NM_020240 ENSG00000158985 CDC42SE2 SPEC2 CDC42 small effector 2 protein-coding 185964-5 chr4 34040927 34041774 + 439.217 NA Intergenic LTR82B|LTR|ERVL -1457 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 255888-4 chr8 135325054 135326698 + 439.217 NA Intergenic L1MEg|LINE|L1 91745 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 207398-2 chr14 51419922 51420769 + 439.217 NA Intergenic MLT1I-int|LTR|ERVL-MaLR -23210 NR_146549 105370496 Hs.578228 NR_146549 ENSG00000258808 LINC02310 - long intergenic non-protein coding RNA 2310 ncRNA 225406-5 chr6 48504185 48505210 + 439.217 NA Intergenic Intergenic -436008 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 186228-4 chr19 28996734 28997659 + 439.217 NA Intergenic MER58A|DNA|hAT-Charlie -5359 NR_040036 100505835 Hs.176539 NR_040036 ENSG00000267014 LINC01532 - long intergenic non-protein coding RNA 1532 ncRNA 383173 chr5 141254851 141256717 + 439.217 NA Intergenic Intergenic 10389 NM_018935 56121 Hs.130757 NM_018935 ENSG00000113248 PCDHB15 PCDH-BETA15 protocadherin beta 15 protein-coding 196681-4 chrUn_KI270517v1 2247 3223 + 439.217 NA NA ALR/Alpha|Satellite|centr NA NA 192728-3 chr14 68069720 68070520 + 439.217 NA intron (NM_133509, intron 7 of 10) L1PA15|LINE|L1 246528 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 246576-4 chr5 9575243 9576287 + 439.217 NA Intergenic Intergenic 26938 NR_003689 100113384 NR_003689 SNORD123 - small nucleolar RNA, C/D box 123 snoRNA 373861 chr10 41784430 41786206 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 582727 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 187546 chr11 99294430 99295071 + 439.217 NA intron (NM_001243270, intron 1 of 23) L1M4a2|LINE|L1 -261395 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 228481-4 chr8 59546071 59547231 + 439.217 NA Intergenic Intergenic 427441 NR_149031 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 184383-4 chr8 138058395 138059368 + 439.217 NA intron (NR_161374, intron 1 of 7) intron (NR_161374, intron 1 of 7) 24664 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 374125-2 chr2 240076881 240078365 + 439.217 NA Intergenic L1MEg|LINE|L1 -31551 NM_173351 150681 Hs.626616 NM_173351 ENSG00000178586 OR6B3 OR6B3P|OR6B3Q olfactory receptor family 6 subfamily B member 3 protein-coding 206695-2 chr17 71583043 71584044 + 439.217 NA Intergenic Intergenic -381364 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 179025-2 chr2 190742433 190743328 + 439.217 NA Intergenic MLT1J|LTR|ERVL-MaLR 83722 NM_001321315 4664 Hs.107474 NM_005966 ENSG00000138386 NAB1 - NGFI-A binding protein 1 protein-coding 265199-2 chr5 15244884 15246171 + 439.217 NA intron (NR_109944, intron 1 of 2) HAL1b|LINE|L1 21033 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA 183329-3 chr20 42266945 42267669 + 439.217 NA intron (NM_007050, intron 13 of 30) MER47A|DNA|TcMar-Tigger -418176 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 242184-3 chr3 104128893 104130134 + 439.217 NA Intergenic Tigger5b|DNA|TcMar-Tigger -605397 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 184910-6 chr3 168151998 168152826 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR -56488 NM_014498 27333 Hs.143600 NM_014498 ENSG00000173905 GOLIM4 GIMPC|GOLPH4|GPP130|P138 golgi integral membrane protein 4 protein-coding 183680-3 chr9 29819740 29820461 + 439.217 NA Intergenic L1M2c|LINE|L1 588354 NR_046204 401497 Hs.680131 NR_046204 LINC01242 - long intergenic non-protein coding RNA 1242 ncRNA 189039-3 chr14 43009523 43010586 + 439.217 NA Intergenic Intergenic 1403198 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 226021 chr14 66209897 66211015 + 439.217 NA Intergenic MER34C2|LTR|ERV1 -275915 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 192113-4 chr7 4442544 4443412 + 439.217 NA Intergenic L1M5|LINE|L1 -239317 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 233751-2 chr11 21212299 21213538 + 439.217 NA intron (NM_201551, intron 13 of 18) L1MD2|LINE|L1 543332 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding 288214 chr3 28749860 28751223 + 439.217 NA intron (NR_038840, intron 2 of 4) L1PA11|LINE|L1 175263 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA 246489-3 chr7 8478025 8479096 + 439.217 NA intron (NM_152745, intron 2 of 2) L1MC5|LINE|L1 44951 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding 381680 chr11 50366402 50368376 + 439.217 NA Intergenic AluYc3|SINE|Alu -41758 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 181045-5 chr8 79815590 79816463 + 439.217 NA intron (NR_110954, intron 3 of 5) MER5A|DNA|hAT-Charlie 47884 NR_125410 101927067 Hs.144030 NR_125410 ENSG00000272138 LINC01607 - long intergenic non-protein coding RNA 1607 ncRNA 214601-2 chr7 53208567 53209514 + 439.217 NA Intergenic Intergenic 173407 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 179728-5 chr6 1194949 1195836 + 439.217 NA Intergenic L1M5|LINE|L1 -94060 NR_027115 285768 Hs.209463 NR_027115 LINC01622 - long intergenic non-protein coding RNA 1622 ncRNA 207662 chr12 26523633 26524507 + 439.217 NA intron (NM_002223, intron 37 of 56) intron (NM_002223, intron 37 of 56) 309124 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding 210209-3 chr19 43976865 43977911 + 439.217 NA Intergenic Intergenic -6782 NM_001260488 7711 Hs.279567 NM_003445 ENSG00000204920 ZNF155 pHZ-96 zinc finger protein 155 protein-coding 343819-2 chr18 3911157 3913165 + 439.217 NA intron (NM_001242761, intron 3 of 11) intron (NM_001242761, intron 3 of 11) 26808 NR_106776 102465430 NR_106776 ENSG00000275518 MIR6718 hsa-mir-6718 microRNA 6718 ncRNA 363408 chr3 10906432 10908106 + 439.217 NA intron (NM_014229, intron 6 of 13) L1M8|LINE|L1 -85465 NM_001348250 6529 Hs.443874 NM_003042 ENSG00000157103 SLC6A1 GABATHG|GABATR|GAT1|MAE solute carrier family 6 member 1 protein-coding 201952-8 chr7 3500016 3500880 + 439.217 NA intron (NM_152744, intron 1 of 44) HAL1|LINE|L1 199196 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 219784-3 chr4 28815605 28817179 + 439.217 NA Intergenic L1MA6|LINE|L1 -3190 NR_036237 100422937 NR_036237 ENSG00000283275 MIR4275 - microRNA 4275 ncRNA 243151 chr19 56446445 56447774 + 439.217 NA intron (NM_022103, intron 4 of 4) intron (NM_022103, intron 4 of 4) 30236 NM_001321356 63934 Hs.676605 NM_022103 ENSG00000198046 ZNF667 MIPU1 zinc finger protein 667 protein-coding 198614-4 chr4 106860346 106861463 + 439.217 NA Intergenic L1MCc|LINE|L1 175409 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding 201776-3 chr3 917212 918156 + 439.217 NA Intergenic Intergenic -175340 NM_014461 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding 208365-3 chr2 104260104 104261030 + 439.217 NA Intergenic Intergenic 147765 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 208189 chr1 40456087 40457128 + 439.217 NA intron (NM_001369565, intron 3 of 5) intron (NM_001369565, intron 3 of 5) 6131 NM_023070 65243 Hs.133034 NM_023070 ENSG00000187801 ZFP69B ZKSCAN23B|ZNF643|ZSCAN54B ZFP69 zinc finger protein B protein-coding 202918-2 chr19 56551848 56552766 + 439.217 NA 3' UTR (NM_001308440, exon 7 of 7) 3' UTR (NM_001308440, exon 7 of 7) 13359 NM_020828 140612 Hs.14794 NM_020828 ENSG00000196867 ZFP28 mkr5 ZFP28 zinc finger protein protein-coding 225055 chr10 56963996 56965100 + 439.217 NA Intergenic L1PA16|LINE|L1 340011 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 225406-3 chr17 70964914 70966018 + 439.217 NA Intergenic AluJr4|SINE|Alu 236713 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 202303 chr12 41840420 41841253 + 439.217 NA Intergenic Intergenic 76647 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA 187018 chr8 101755842 101756795 + 439.217 NA intron (NM_001040625, intron 4 of 6) intron (NM_001040625, intron 4 of 6) 34651 NM_032041 83988 Hs.492427 NM_032041 ENSG00000104490 NCALD - neurocalcin delta protein-coding 199053 chr10 49350010 49350937 + 439.217 NA Intergenic MLT1G1|LTR|ERVL-MaLR 45616 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding 242711-3 chr14 55980890 55982186 + 439.217 NA Intergenic Tigger1|DNA|TcMar-Tigger -136873 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding 206695 chr15 56507918 56508851 + 439.217 NA Intergenic L1PA13|LINE|L1 -43247 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding 265199-3 chr8 126791091 126792096 + 439.217 NA Intergenic L1M|LINE|L1 -221561 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 204499-7 chr5 46320480 46321536 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -624628 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 302972-2 chr4 145511461 145512836 + 439.217 NA intron (NM_001354817, intron 1 of 6) L1MEg|LINE|L1 5046 NR_126371 104326058 Hs.714527 NR_126371 ENSG00000250902 SMAD1-AS1 - SMAD1 antisense RNA 1 ncRNA 482875 chr6 160308418 160310873 + 439.217 NA Intergenic L1M3e|LINE|L1 -38733 NM_021977 6581 Hs.567337 NM_021977 ENSG00000146477 SLC22A3 EMT|EMTH|OCT3 solute carrier family 22 member 3 protein-coding 190005-2 chr1 246531065 246531949 + 439.217 NA Intergenic HUERS-P3-int|LTR|ERV1 -7220 NR_040002 255654 Hs.407570 NR_040002 ENSG00000242042 LINC01743 - long intergenic non-protein coding RNA 1743 ncRNA 213723-5 chr8 138548646 138549507 + 439.217 NA Intergenic Intergenic -51346 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 208364-3 chr22 33751556 33752609 + 439.217 NA intron (NM_133642, intron 2 of 14) L1ME3|LINE|L1 27096 NR_038950 100506195 Hs.658872 NR_038949 ENSG00000224973 LARGE-AS1 - LARGE antisense RNA 1 ncRNA 232961 chr12 129020521 129021861 + 439.217 NA Intergenic L1ME4b|LINE|L1 -88499 NR_104173 283352 Hs.665667 NR_104172 ENSG00000249196 TMEM132D-AS1 - TMEM132D antisense RNA 1 ncRNA 201864-6 chr6 70725903 70726835 + 439.217 NA intron (NM_001281440, intron 1 of 10) L2c|LINE|L2 57839 NM_001281440 60682 Hs.485717 NM_021940 ENSG00000112305 SMAP1 SMAP-1 small ArfGAP 1 protein-coding 296647-3 chr4 56077281 56078417 + 439.217 NA Intergenic L2c|LINE|L2 -92346 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding 192904-3 chr8 137113073 137114037 + 439.217 NA Intergenic L1MB7|LINE|L1 300033 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 246137-2 chr8 138051130 138052385 + 439.217 NA intron (NR_161374, intron 1 of 7) MIRb|SINE|MIR 31788 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 268010-2 chr12 37876841 37878098 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -439305 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 259226-2 chr11 13193955 13195190 + 439.217 NA Intergenic L1M5|LINE|L1 -82080 NM_001351804 406 Hs.65734 NM_001178 ENSG00000133794 ARNTL BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5 aryl hydrocarbon receptor nuclear translocator like protein-coding 229535-2 chr2 67584954 67586001 + 439.217 NA Intergenic L1PA15-16|LINE|L1 188144 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding 209067-5 chr7 7484344 7485089 + 439.217 NA intron (NM_001037763, intron 13 of 34) L1MEd|LINE|L1 51157 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 213723 chr11 84000706 84001730 + 439.217 NA intron (NM_001142699, intron 11 of 27) L1MA4A|LINE|L1 272062 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 239022-2 chr2 77331994 77333058 + 439.217 NA intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 189850 NM_001282928 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding 324230-2 chr2 22335811 22337265 + 439.217 NA Intergenic Intergenic -199941 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 257118 chr2 89804159 89805634 + 439.217 NA Intergenic Intergenic -166989 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 180606 chr11 37250300 37251290 + 439.217 NA Intergenic Intergenic -652516 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding 354448 chr6 27355894 27357206 + 439.217 NA Intergenic Intergenic 14975 NR_002722 7754 Hs.8198 NR_002722 ZNF204P ZNF184-Lp|ZNF204|ZNF315P|b24o18.1 zinc finger protein 204, pseudogene pseudo 179376-9 chr5 17698147 17698769 + 439.217 NA Intergenic Intergenic -42820 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding 282943-3 chr9 96788587 96789795 + 439.217 NA Intergenic Intergenic -11062 NM_014930 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding 220399-2 chr2 72044904 72045856 + 439.217 NA Intergenic L1MB3|LINE|L1 102482 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 289444-2 chr8 138454377 138455700 + 439.217 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 42223 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 250969 chr11 24044861 24046165 + 439.217 NA Intergenic L1M4c|LINE|L1 -451540 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding 205993 chr2 34174552 34175404 + 439.217 NA intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 107752 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 181572-9 chr5 11781121 11781930 + 439.217 NA intron (NM_001288717, intron 1 of 20) intron (NM_001288717, intron 1 of 20) 122921 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 193870-3 chr5 29649297 29650468 + 439.217 NA Intergenic AluSg4|SINE|Alu -230678 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 410931 chr2 76025098 76026921 + 439.217 NA Intergenic L1PA16|LINE|L1 -315094 NM_001201335 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 191762 chr11 118020553 118021504 + 439.217 NA intron (NM_001354434, intron 3 of 5) L1ME3C|LINE|L1 34634 NR_026691 3587 Hs.504035 NM_001558 ENSG00000110324 IL10RA CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R interleukin 10 receptor subunit alpha protein-coding 181748 chr10 76583105 76583967 + 439.217 NA Intergenic HAL1b|LINE|L1 -304508 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 248333 chr1 40499867 40500978 + 439.217 NA Intergenic MLT1O|LTR|ERVL-MaLR -8297 NM_001346952 64789 Hs.59584 NM_022774 ENSG00000164002 EXO5 C1orf176|DEM1|Exo V|hExo5 exonuclease 5 protein-coding 183505-9 chr5 180187409 180188354 + 439.217 NA intron (NM_175062, intron 1 of 13) L1MB5|LINE|L1 21330 NM_175062 255426 Hs.190559 NM_175062 ENSG00000146090 RASGEF1C - RasGEF domain family member 1C protein-coding 197208-3 chr5 170285097 170286036 + 439.217 NA intron (NM_005565, intron 3 of 20) L1MEc|LINE|L1 12211 NM_005565 3937 Hs.304475 NM_005565 ENSG00000043462 LCP2 SLP-76|SLP76 lymphocyte cytosolic protein 2 protein-coding 196945-6 chr5 168597947 168598917 + 439.217 NA Intergenic MLT1F1-int|LTR|ERVL-MaLR -19064 NM_024594 79646 Hs.388400 NM_024594 ENSG00000120137 PANK3 - pantothenate kinase 3 protein-coding 194661-5 chr8 131486045 131486823 + 439.217 NA Intergenic Intergenic -417659 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 391166 chr10 52585669 52587371 + 439.217 NA intron (NR_155748, intron 1 of 2) L1MA3|LINE|L1 -115987 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA 268537 chr5 133375633 133376800 + 439.217 NA intron (NM_015082, intron 4 of 15) L1ME3B|LINE|L1 51490 NR_031621 100302134 NR_031621 ENSG00000221287 MIR1289-2 MIRN1289-2|hsa-mir-1289-2 microRNA 1289-2 ncRNA 227953 chrX 65276542 65277577 + 439.217 NA Intergenic L1M2c|LINE|L1 -211676 NM_001010888 340554 Hs.21249 NM_001010888 ENSG00000102053 ZC3H12B CXorf32|MCPIP2 zinc finger CCCH-type containing 12B protein-coding 589780 chr3 97216587 97218880 + 439.217 NA intron (NM_001080448, intron 3 of 17) intron (NM_001080448, intron 3 of 17) -221874 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 265814 chr2 95225440 95226832 + 439.217 NA Intergenic MSTD-int|LTR|ERVL-MaLR -48313 NM_001321070 150696 Hs.437376 NM_144707 ENSG00000155066 PROM2 PROML2 prominin 2 protein-coding 182626-4 chr12 130599007 130599921 + 439.217 NA intron (NM_001351226, intron 2 of 21) L1M4|LINE|L1 28992 NM_015347 23504 Hs.657441 NM_015347 ENSG00000060709 RIMBP2 PPP1R133|RBP2|RIM-BP2 RIMS binding protein 2 protein-coding 268801 chr6 65517894 65518957 + 439.217 NA intron (NM_001292009, intron 2 of 43) intron (NM_001292009, intron 2 of 43) 61379 NM_198283 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding 195979 chr11 28338906 28339918 + 439.217 NA Intergenic L1MEg|LINE|L1 138136 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA 183681-3 chr8 133614724 133615440 + 439.217 NA Intergenic Intergenic -43195 NM_003033 6482 Hs.374257 NM_003033 ENSG00000008513 ST3GAL1 Gal-NAc6S|SIAT4A|SIATFL|ST3GalA|ST3GalA.1|ST3GalIA|ST3GalIA,1|ST3O ST3 beta-galactoside alpha-2,3-sialyltransferase 1 protein-coding 316236 chr12 34500115 34501406 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 478264 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 241130-3 chr14 62785053 62786407 + 439.217 NA intron (NM_139318, intron 9 of 10) intron (NM_139318, intron 9 of 10) 259728 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 247103 chr18 1861520 1862950 + 439.217 NA Intergenic MER103C|DNA|hAT-Charlie -502606 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 208540-3 chr20 42285824 42286714 + 439.217 NA intron (NM_133170, intron 12 of 31) L1MA5A|LINE|L1 -399214 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 216973-3 chr2 176379082 176380121 + 439.217 NA Intergenic L1ME1|LINE|L1 110159 NM_001319097 10651 Hs.470728 NM_006554 ENSG00000128654 MTX2 - metaxin 2 protein-coding 193255 chr20 24196050 24196929 + 439.217 NA Intergenic L1MB8|LINE|L1 -3278 NR_040102 400839 Hs.651965 NR_040102 ENSG00000230133 LINC01721 - long intergenic non-protein coding RNA 1721 ncRNA 181572-10 chr5 58839967 58840711 + 439.217 NA intron (NM_138453, intron 4 of 4) L1MA5A|LINE|L1 159559 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 221892-4 chr6 40216453 40217675 + 439.217 NA Intergenic Intergenic 138942 NR_038887 401260 Hs.654837 NM_001001705 LINC00951 - long intergenic non-protein coding RNA 951 ncRNA 283910 chr1 23359782 23361457 + 439.217 NA 3' UTR (NM_001077195, exon 4 of 4) 3' UTR (NM_001077195, exon 4 of 4) 7767 NM_030634 80818 Hs.293798 NM_030634 ENSG00000125945 ZNF436 ZNF|Zfp46 zinc finger protein 436 protein-coding 188863 chr10 39185375 39186166 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 489174 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 182538-2 chr8 122631694 122632458 + 439.217 NA Intergenic MLT2C1|LTR|ERVL 62030 NR_126348 104266958 Hs.575540 NR_126348 ENSG00000253819 LINC01151 - long intergenic non-protein coding RNA 1151 ncRNA 209770-2 chr10 111226687 111227684 + 439.217 NA Intergenic Intergenic 112894 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 236387-4 chr5 150886471 150887580 + 439.217 NA intron (NM_001346557, intron 3 of 3) L1PREC2|LINE|L1 17958 NM_001172832 91975 Hs.134885 NM_052860 ENSG00000145908 ZNF300 - zinc finger protein 300 protein-coding 181748-7 chr4 98399846 98400665 + 439.217 NA intron (NM_021159, intron 6 of 14) L1MA5A|LINE|L1 138871 NM_001100429 5910 Hs.132858 NM_021159 ENSG00000138698 RAP1GDS1 GDS1|SmgGDS Rap1 GTPase-GDP dissociation stimulator 1 protein-coding 190532-13 chr8 85984885 85985724 + 439.217 NA Intergenic Intergenic 84364 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding 290322-2 chr2 65807946 65809307 + 439.217 NA Intergenic L1M5|LINE|L1 -376027 NM_181784 200734 Hs.59332 NM_181784 ENSG00000198369 SPRED2 Spred-2 sprouty related EVH1 domain containing 2 protein-coding 227690-2 chr7 41022115 41023231 + 439.217 NA Intergenic L1MEd|LINE|L1 -42734 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 224879-3 chr5 32883105 32884384 + 439.217 NA Intergenic L1MA5A|LINE|L1 -63699 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 218115-2 chr11 81983050 81984288 + 439.217 NA intron (NR_120571, intron 6 of 7) MLT1A|LTR|ERVL-MaLR -92833 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 278200-4 chr7 85503387 85504625 + 439.217 NA Intergenic L1MA2|LINE|L1 82884 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA 177795-2 chr11 56995802 56996610 + 439.217 NA Intergenic MER52-int|LTR|ERV1 7292 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding 194134-4 chr7 28660185 28660909 + 439.217 NA intron (NM_182899, intron 4 of 9) L2b|LINE|L2 -25586 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding 258523 chr5 66104829 66106062 + 439.217 NA Intergenic L1MB2|LINE|L1 -38855 NM_001323527 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding 178674 chr5 166136414 166137305 + 439.217 NA Intergenic L1M2|LINE|L1 789511 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA 333453 chr17 77704778 77706396 + 439.217 NA Intergenic Intergenic 22972 NR_104134 100132174 Hs.640110 NR_104134 ENSG00000267790 LINC01987 - long intergenic non-protein coding RNA 1987 ncRNA 363057-2 chr6 56115315 56117133 + 439.217 NA intron (NR_134851, intron 16 of 29) L1MA1|LINE|L1 -24562 NM_001318754 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 187721-9 chr8 136025809 136026798 + 439.217 NA Intergenic Intergenic -504495 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 236650 chr2 42868827 42869872 + 439.217 NA Intergenic L1ME3A|LINE|L1 -76766 NM_012205 23498 Hs.368805 NM_012205 ENSG00000162882 HAAO 3-HAO|HAO|VCRL1|h3HAO 3-hydroxyanthranilate 3,4-dioxygenase protein-coding 195803-7 chr3 110489381 110490180 + 439.217 NA Intergenic (TATGTT)n|Simple_repeat|Simple_repeat 580179 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA 231731 chr2 199145018 199146006 + 439.217 NA Intergenic Intergenic 312427 NR_134967 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding 188512-5 chr8 117492264 117493316 + 439.217 NA Intergenic Intergenic -27923 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 214953 chr14 37662945 37664090 + 439.217 NA intron (NM_001310135, intron 3 of 32) intron (NM_001310135, intron 3 of 32) 67888 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding 216797 chr11 50527251 50528223 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 118590 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 184032-4 chr5 146736985 146737666 + 439.217 NA intron (NM_001271899, intron 2 of 9) MIRb|SINE|MIR 141460 NM_001271948 5521 Hs.627618 NM_181674 ENSG00000156475 PPP2R2B B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12 protein phosphatase 2 regulatory subunit Bbeta protein-coding 181397-6 chr7 146512827 146513810 + 439.217 NA Intergenic L1M1|LINE|L1 -260953 NM_014141 26047 Hs.655684 NM_014141 ENSG00000174469 CNTNAP2 AUTS15|CASPR2|CDFE|NRXN4|PTHSL1 contactin associated protein like 2 protein-coding 245434-4 chr7 48736609 48737733 + 439.217 NA Intergenic Intergenic -187376 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 188161 chr1 193828749 193829821 + 439.217 NA Intergenic Intergenic 524540 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 192026-6 chr3 117321412 117322297 + 439.217 NA Intergenic L1M3d|LINE|L1 369071 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 197560-2 chr12 118586290 118587048 + 439.217 NA Intergenic MLT1F1|LTR|ERVL-MaLR 175010 NR_134999 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA 235245 chr5 53831326 53832728 + 439.217 NA Intergenic AluSx3|SINE|Alu -12345 NR_147167 105378966 Hs.570949 NR_147167 LINC02105 - long intergenic non-protein coding RNA 2105 ncRNA 246664-9 chr8 89456055 89457463 + 439.217 NA Intergenic L2|LINE|L2 300952 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 185789-4 chr15 39209303 39210082 + 439.217 NA Intergenic Intergenic -40977 NR_144508 400360 Hs.376109 NM_207445 ENSG00000175746 C15orf54 - chromosome 15 open reading frame 54 (putative) ncRNA 239461-2 chr2 31481157 31482408 + 439.217 NA Intergenic L1PA14|LINE|L1 -67040 NM_000379 7498 Hs.250 NM_000379 ENSG00000158125 XDH XAN1|XO|XOR xanthine dehydrogenase protein-coding 220399-3 chr21 43198655 43199882 + 439.217 NA Intergenic L1MEc|LINE|L1 29032 NM_001320719 102724652 Hs.184085 NM_001314050 ENSG00000276076 CRYAA2 CRYAA crystallin alpha A2 protein-coding 269064 chr2 50618662 50619757 + 439.217 NA intron (NM_001330093, intron 8 of 22) intron (NM_001330093, intron 8 of 22) 77053 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA 194310-6 chr6 69608058 69608924 + 439.217 NA Intergenic L1ME3|LINE|L1 187975 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding 182451-5 chr6 141507795 141508761 + 439.217 NA Intergenic Intergenic 580521 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding 182451-2 chr12 46876283 46877002 + 439.217 NA Intergenic Intergenic -50645 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding 187370-4 chr15 62227505 62228349 + 439.217 NA Intergenic Intergenic 20868 NR_136885 255180 Hs.370479 NM_173805 GOLGA2P11 - GOLGA2 pseudogene 11 pseudo 198438-8 chr9 82447932 82448830 + 439.217 NA Intergenic Intergenic 459609 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding 217764 chr4 33593262 33594079 + 439.217 NA Intergenic HUERS-P3b-int|LTR|ERV1 446223 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 228920 chr10 56047443 56048463 + 439.217 NA Intergenic Intergenic 313306 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 233751-3 chr14 62206084 62207029 + 439.217 NA Intergenic MSTD-int|LTR|ERVL-MaLR -66583 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 186492-3 chr22 28364500 28365552 + 439.217 NA intron (NM_001145418, intron 2 of 22) Tigger1|DNA|TcMar-Tigger -94843 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA 192465-8 chr5 16295020 16296136 + 439.217 NA Intergenic Intergenic 115337 NR_149044 401176 Hs.369777 NR_149044 LOC401176 - uncharacterized LOC401176 ncRNA 207135 chr10 69563921 69564908 + 439.217 NA Intergenic Intergenic 9008 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding 181309-3 chr10 31434312 31435045 + 439.217 NA intron (NM_001323646, intron 4 of 11) intron (NM_001323646, intron 4 of 11) -34923 NM_001368169 100505502 Hs.730227 NM_001368169 LOC100505502 - putative UPF0607 protein FLJ37424 protein-coding 189039-2 chr12 41004298 41005109 + 439.217 NA intron (NM_001843, intron 17 of 23) L1PA13|LINE|L1 96346 NM_175038 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding 230589-2 chr2 72071843 72072881 + 439.217 NA Intergenic L1ME1|LINE|L1 75500 NM_019885 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 200371-8 chr8 113700751 113701718 + 439.217 NA Intergenic L1MCc|LINE|L1 -264295 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 261158-4 chr8 140178712 140179630 + 439.217 NA intron (NM_001160372, intron 17 of 22) L1ME1|LINE|L1 -78636 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 236211 chr10 17448808 17449987 + 439.217 NA intron (NM_001004470, intron 2 of 7) LTR81B|LTR|Gypsy 5198 NM_001004470 338596 Hs.677766 NM_001004470 ENSG00000148488 ST8SIA6 SIA8F|SIAT8-F|SIAT8F|ST8SIA-VI|ST8SiaVI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 protein-coding 235420-3 chr5 60568323 60569236 + 439.217 NA Intergenic MSTA-int|LTR|ERVL-MaLR -72493 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 195276-2 chr3 104974772 104975905 + 439.217 NA Intergenic L1MEa|LINE|L1 -391375 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 240339 chr20 41897657 41899014 + 439.217 NA Intergenic MIR|SINE|MIR -279958 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 184735-2 chr16 74160373 74161395 + 439.217 NA Intergenic L1MEj|LINE|L1 54637 NR_104657 101928035 Hs.39557 NR_104657 ENSG00000261404 LOC101928035 - uncharacterized LOC101928035 ncRNA 245698-2 chr11 55010614 55011657 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -251020 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 182802-2 chr10 112865176 112866068 + 439.217 NA Intergenic L1MC5a|LINE|L1 42126 NR_120684 103344931 Hs.458447 NR_120684 ENSG00000260917 LOC103344931 - uncharacterized LOC103344931 ncRNA 214338-2 chr2 117531692 117532632 + 439.217 NA Intergenic Intergenic -282529 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 243765-6 chr8 138404124 138405276 + 439.217 NA intron (NM_001362965, intron 1 of 19) Tigger1|DNA|TcMar-Tigger 92561 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 187019 chr1 112281062 112282131 + 439.217 NA Intergenic Intergenic -114618 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding 190708-9 chr6 39996480 39997352 + 439.217 NA Intergenic HERV3-int|LTR|ERV1 -62454 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 341271 chr10 43952178 43953577 + 439.217 NA intron (NR_033846, intron 5 of 7) L1MB8|LINE|L1 40475 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 185964-6 chr8 118653132 118654047 + 439.217 NA intron (NR_038210, intron 2 of 4) intron (NR_038210, intron 2 of 4) -31626 NM_001363274 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding 179728-4 chr5 94229993 94230828 + 439.217 NA intron (NM_001145678, intron 20 of 20) HAL1|LINE|L1 -118711 NR_028080 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding 179728-6 chr6 60615818 60616809 + 439.217 NA Intergenic Intergenic -957817 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 268186 chr2 89815882 89817318 + 439.217 NA Intergenic (ATTCC)n|Simple_repeat|Simple_repeat -178693 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 208101-4 chr5 29481351 29482610 + 439.217 NA Intergenic L1PA15-16|LINE|L1 -86004 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA 185701-7 chr7 62614145 62615046 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 689461 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 222507 chr17 65801418 65802357 + 439.217 NA intron (NM_001353129, intron 21 of 26) L1MB7|LINE|L1 24564 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 238846-2 chr6 62687037 62688224 + 439.217 NA Intergenic Intergenic -401403 NM_001350622 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 196418-2 chr17 73960753 73961932 + 439.217 NA Intergenic MSTB-int|LTR|ERVL-MaLR -132805 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA 198789 chr12 59794365 59795079 + 439.217 NA Intergenic L1MC2|LINE|L1 105352 NR_073055 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 212581-2 chr20 42692340 42693429 + 439.217 NA intron (NM_133170, intron 6 of 31) L1ME3|LINE|L1 7401 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 188863-11 chr9 105222836 105223676 + 439.217 NA Intergenic MER41B|LTR|ERV1 -21349 NM_001330731 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding 407593 chr1 2957339 2959337 + 439.217 NA Intergenic AluSx|SINE|Alu -63129 NM_080431 140625 Hs.236635 NM_080431 ENSG00000169717 ACTRT2 ARPM2|ARPT2|Arp-T2|HARPM2 actin related protein T2 protein-coding 194661-4 chr8 117288401 117289232 + 439.217 NA Intergenic Intergenic 153821 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 250002 chr12 99047499 99048607 + 439.217 NA intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) -45306 NR_110095 101928937 Hs.555499 NR_110095 ENSG00000258039 LOC101928937 - uncharacterized LOC101928937 ncRNA 194046 chr12 34444624 34445541 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 422586 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 242975 chr1 241269171 241270726 + 439.217 NA intron (NM_001282778, intron 2 of 16) intron (NM_001282778, intron 2 of 16) 85878 NM_001350116 6000 Hs.655739 NM_002924 ENSG00000182901 RGS7 - regulator of G protein signaling 7 protein-coding 204499-2 chr12 132924091 132924969 + 439.217 NA 3' UTR (NM_183238, exon 5 of 5) 3' UTR (NM_183238, exon 5 of 5) 31776 NM_001164715 100289635 Hs.29698 NM_183238 ENSG00000196458 ZNF605 - zinc finger protein 605 protein-coding 225230 chr11 32634785 32635873 + 439.217 NA intron (NM_001008391, intron 14 of 17) L1MEc|LINE|L1 51498 NM_001307929 10480 Hs.502244 NM_006360 ENSG00000149100 EIF3M B5|GA17|PCID1|TANGO7|hfl-B5 eukaryotic translation initiation factor 3 subunit M protein-coding 235772 chr3 34122631 34123771 + 439.217 NA Intergenic L1M1|LINE|L1 324571 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 180167-11 chr8 46456328 46457062 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 160948 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 184032-5 chr7 62653843 62654612 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 649829 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 213811 chr1 98106753 98107631 + 439.217 NA Intergenic Intergenic -57499 NR_046105 400765 Hs.451802 NM_001001688 ENSG00000225206 MIR137HG - MIR137 host gene ncRNA 223561-2 chr5 42290537 42291740 + 439.217 NA Intergenic Intergenic -115793 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 189478-2 chr14 53983250 53984283 + 439.217 NA Intergenic Intergenic -26875 NM_130850 652 Hs.68879 NM_001202 ENSG00000125378 BMP4 BMP2B|BMP2B1|MCOPS6|OFC11|ZYME bone morphogenetic protein 4 protein-coding 249387 chr16 3223331 3224995 + 439.217 NA exon (NM_001145446, exon 5 of 5) exon (NM_001145446, exon 5 of 5) 8601 NR_002169 26184 Hs.651203 NR_002169 ENSG00000203581 OR1F2P OLFMF2|OR16-3|OR1F11|OR1F2|OR1F3P|hg91 olfactory receptor family 1 subfamily F member 2 pseudogene pseudo 204763 chr10 4443599 4444598 + 439.217 NA Intergenic L1MB7|LINE|L1 37629 NR_108056 100507059 Hs.158438 NR_108054 ENSG00000224382 LINC00703 - long intergenic non-protein coding RNA 703 ncRNA 250969-2 chr17 72767946 72769229 + 439.217 NA intron (NM_001352692, intron 6 of 9) intron (NM_001352692, intron 6 of 9) -128115 NR_033876 400619 Hs.447555 NR_033876 ENSG00000227036 LINC00511 LCAL5|onco-lncRNA-12 long intergenic non-protein coding RNA 511 ncRNA 272490-2 chr5 46238659 46239922 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -542910 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 189215-7 chr5 150926861 150927767 + 439.217 NA Intergenic L1M3b|LINE|L1 19270 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 240867-2 chr7 73386894 73388289 + 439.217 NA Intergenic AluJr|SINE|Alu -46187 NM_003508 8326 Hs.647029 NM_003508 ENSG00000188763 FZD9 CD349|FZD3 frizzled class receptor 9 protein-coding 224967-6 chr8 135207772 135208903 + 439.217 NA Intergenic MLT1A|LTR|ERVL-MaLR -25794 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 195188-5 chr4 40357680 40358603 + 439.217 NA Intergenic AluSz6|SINE|Alu 22808 NM_017581 55584 Hs.272278 NM_017581 ENSG00000174343 CHRNA9 HSA243342|NACHRA9 cholinergic receptor nicotinic alpha 9 subunit protein-coding 224791-3 chr19 37385300 37386360 + 439.217 NA intron (NM_032453, intron 4 of 4) intron (NM_032453, intron 4 of 4) 14731 NM_032453 84503 Hs.590940 NM_032453 ENSG00000189164 ZNF527 - zinc finger protein 527 protein-coding 334420 chr1 219260610 219262136 + 439.217 NA Intergenic Intergenic 86404 NM_001300772 127018 Hs.657617 NM_138794 ENSG00000143353 LYPLAL1 Q96AV0 lysophospholipase like 1 protein-coding 213811-2 chr2 21692135 21693005 + 439.217 NA intron (NR_038837, intron 2 of 2) intron (NR_038837, intron 2 of 2) 18082 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA 208540-2 chr19 27725759 27726613 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -67245 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 212054-2 chr19 24357237 24358211 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -194277 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 184471-2 chr11 112684348 112685238 + 439.217 NA Intergenic L1M5|LINE|L1 -128991 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 199141-2 chr17 60770616 60771586 + 439.217 NA intron (NM_001330413, intron 6 of 25) AluSz6|SINE|Alu 93250 NM_001320470 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 193168-5 chr2 239188401 239189569 + 439.217 NA intron (NM_006037, intron 4 of 26) MLT1F|LTR|ERVL-MaLR 6472 NR_026664 85009 Hs.744565 NM_032923 MGC16025 - uncharacterized LOC85009 ncRNA 187370-6 chr19 44436612 44437390 + 439.217 NA intron (NM_001278510, intron 4 of 5) intron (NM_001278510, intron 4 of 5) 11471 NR_103551 7772 Hs.709348 NM_014518 ENSG00000278318 ZNF229 - zinc finger protein 229 protein-coding 178673 chr14 52566947 52567604 + 439.217 NA intron (NM_001353361, intron 1 of 7) MIR|SINE|MIR 14439 NM_001353361 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding 190005-3 chr16 8741322 8741922 + 439.217 NA intron (NM_020686, intron 2 of 15) intron (NM_020686, intron 2 of 15) 20909 NM_001127448 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding 182978-4 chr8 33973586 33974325 + 439.217 NA Intergenic MLT1D|LTR|ERVL-MaLR -373849 NM_001305115 78986 Hs.8719 NM_024025 ENSG00000133878 DUSP26 DSP-4|DUSP24|LDP-4|LDP4|MKP-8|MKP8|NATA1|NEAP|SKRP3 dual specificity phosphatase 26 protein-coding 263179-3 chr3 71974274 71975516 + 439.217 NA Intergenic Tigger15a|DNA|TcMar-Tigger 125560 NR_104116 285286 Hs.559386 NR_104116 ENSG00000241163 LINC00877 - long intergenic non-protein coding RNA 877 ncRNA 181924-4 chr17 54100608 54101428 + 439.217 NA Intergenic Intergenic 278091 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding 179728-2 chr14 66441495 66442212 + 439.217 NA Intergenic L1MA10|LINE|L1 -44518 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 177707-2 chr13 47570807 47571616 + 439.217 NA Intergenic Tigger3b|DNA|TcMar-Tigger 361411 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA 189039-4 chr2 57015615 57016566 + 439.217 NA Intergenic U13_|snRNA|snRNA -830320 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 226636-2 chr3 28096852 28097599 + 439.217 NA Intergenic L1M4b|LINE|L1 -144394 NM_001331187 152100 Hs.444724 NM_182523 ENSG00000187118 CMC1 C3orf68 C-X9-C motif containing 1 protein-coding 231467-2 chr19 36452095 36453307 + 439.217 NA intron (NM_001145345, intron 4 of 4) L1MA9|LINE|L1 31527 NR_033748 644189 Hs.608412 NR_033748 LOC644189 - acyl-CoA thioesterase 4 pseudogene pseudo 298755 chr12 113626645 113627984 + 439.217 NA Intergenic MSTA|LTR|ERVL-MaLR 146369 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA 213899-2 chr10 78664672 78665590 + 439.217 NA Intergenic Intergenic 397789 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 215392-3 chr7 62917526 62918656 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 385965 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 264848-2 chr3 27052118 27053311 + 439.217 NA Intergenic L1PA17|LINE|L1 163809 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 235508 chr1 49930141 49930967 + 439.217 NA intron (NM_001323575, intron 1 of 12) L1MEc|LINE|L1 93400 NM_032785 84871 Hs.551844 NM_032785 ENSG00000186094 AGBL4 CCP6 ATP/GTP binding protein like 4 protein-coding 281802 chr2 110134505 110135765 + 439.217 NA intron (NM_207181, intron 16 of 19) L1M4c|LINE|L1 -18569 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding 216710-3 chr19 37706210 37707413 + 439.217 NA intron (NM_001172677, intron 4 of 4) AluJb|SINE|Alu 12377 NM_001172677 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding 232434-6 chr8 114982305 114983301 + 439.217 NA Intergenic L1MC3|LINE|L1 685210 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 211351 chr6 9881156 9881997 + 439.217 NA Intergenic L1M3b|LINE|L1 -522926 NR_145448 109729173 NR_145448 ENSG00000285278 TFAP2A-AS2 HIPSTR TFAP2A antisense RNA 2 ncRNA 194485-7 chr8 32881413 32882316 + 439.217 NA Intergenic L1MEc|LINE|L1 160029 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding 194046-2 chr19 33970298 33971193 + 439.217 NA Intergenic L1ME3Cz|LINE|L1 173875 NM_001129995 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding 182714-4 chr21 27618977 27619858 + 439.217 NA Intergenic L1MCa|LINE|L1 -102962 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 568171 chr11 54749977 54753070 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 44691 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 248685-4 chr3 87373825 87375191 + 439.217 NA Intergenic LTR16B2|LTR|ERVL -97924 NM_001122757 5449 Hs.591654 NM_000306 ENSG00000064835 POU1F1 CPHD1|GHF-1|PIT1|POU1F1a|Pit-1 POU class 1 homeobox 1 protein-coding 242711-5 chr22 49604647 49605489 + 439.217 NA intron (NR_110523, intron 1 of 4) L1ME4a|LINE|L1 52451 NM_001289922 348645 Hs.133159 NM_198851 ENSG00000188511 C22orf34 - chromosome 22 open reading frame 34 protein-coding 231379-2 chr11 21002048 21002973 + 439.217 NA intron (NM_201551, intron 12 of 18) intron (NM_201551, intron 12 of 18) 332924 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding 221717-2 chr14 51955458 51956709 + 439.217 NA intron (NM_001243773, intron 3 of 3) intron (NM_001243773, intron 3 of 3) -33463 NM_016039 51637 Hs.534457 NM_016039 ENSG00000087302 RTRAF C14orf166|CGI-99|CGI99|CLE|CLE7|LCRP369|RLLM1|hCLE|hCLE1 RNA transcription, translation and transport factor protein-coding 236123-2 chr10 85235980 85236948 + 439.217 NA Intergenic Intergenic -37526 NR_120667 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 297086 chr8 91683325 91684381 + 439.217 NA Intergenic L1MA9|LINE|L1 333827 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 298228 chr5 44217550 44219193 + 439.217 NA Intergenic Intergenic -170361 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 181045-6 chr8 138374971 138375721 + 439.217 NA intron (NM_001362965, intron 1 of 19) intron (NM_001362965, intron 1 of 19) 121915 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 201864-2 chr17_GL000205v2_random 10991 11974 + 439.217 NA Intergenic CER|Satellite|Satellite 46484 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 200283-2 chr20 48353332 48354092 + 439.217 NA Intergenic Intergenic -6199 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA 189302-6 chr7 10758602 10759334 + 439.217 NA intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 20976 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA 223561 chr11 50604821 50605845 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr 196186 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 177531-6 chr5 119698136 119698789 + 439.217 NA Intergenic L1M2|LINE|L1 68903 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding 207223-4 chr21 15236510 15237677 + 439.217 NA Intergenic Intergenic -172093 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding 208452 chr1 113511796 113512701 + 439.217 NA intron (NM_001142782, intron 1 of 20) intron (NM_001142782, intron 1 of 20) 121733 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 187370-10 chr8 137742857 137743690 + 439.217 NA Intergenic L1MA3|LINE|L1 -329685 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 275828 chr19 27362137 27363169 + 439.217 NA Intergenic ALR/Alpha|Satellite|centr -430778 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 184295 chr12 14528768 14529576 + 439.217 NA intron (NM_024829, intron 6 of 10) AluJo|SINE|Alu -38560 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA 207047-3 chr18 35306649 35307411 + 439.217 NA non-coding (NR_024565, exon 3 of 3) non-coding (NR_024565, exon 3 of 3) 16758 NR_024565 10778 Hs.314246 NM_006629 ENSG00000257267 ZNF271P CT-ZFP48|HZF7|ZNF-EB|ZNF-dp|ZNF271|ZNFEB zinc finger protein 271, pseudogene pseudo 212844-4 chr18 7814327 7815260 + 439.217 NA intron (NM_002845, intron 2 of 30) intron (NM_002845, intron 2 of 30) 247477 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding 232082-2 chr5 8603774 8605232 + 439.217 NA Intergenic Intergenic 143578 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA 426392 chr20 63077651 63079686 + 439.217 NA intron (NR_033370, intron 1 of 4) L1MB3|LINE|L1 -22624 NR_003244 768096 Hs.549606 NR_003244 HAR1A HAR1F|LINC00064|NCRNA00064 highly accelerated region 1A ncRNA 354887 chr4 30408037 30409536 + 439.217 NA Intergenic L1M2|LINE|L1 -311583 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 187897-9 chr5 25774010 25774628 + 439.217 NA Intergenic MER34C2|LTR|ERV1 583366 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 186755-3 chr3 195008728 195009509 + 439.217 NA Intergenic MIR3|SINE|MIR -85470 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA 345488 chr7 92940819 92942193 + 439.217 NA Intergenic L3|LINE|CR1 -104879 NM_001145306 1021 Hs.119882 NM_001259 ENSG00000105810 CDK6 MCPH12|PLSTIRE cyclin dependent kinase 6 protein-coding 348123 chr6 63338535 63340404 + 439.217 NA Intergenic L1M2|LINE|L1 -19486 NM_016571 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding 197560 chr11 114688500 114689467 + 439.217 NA intron (NM_182495, intron 2 of 5) L1PA17|LINE|L1 10456 NM_182495 120406 Hs.446760 NM_182495 ENSG00000204361 NXPE2 FAM55B neurexophilin and PC-esterase domain family member 2 protein-coding 212317 chr1 106305647 106306499 + 439.217 NA Intergenic L1MC2|LINE|L1 -277820 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA 205817 chr1 71386068 71386992 + 351.373 NA Intergenic L1M1|LINE|L1 305206 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA 205466 chr10 97960034 97961051 + 351.373 NA intron (NM_001206528, intron 2 of 14) L3|LINE|CR1 70079 NM_018058 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding 178410 chr1 194014599 194015447 + 351.373 NA Intergenic Intergenic 710278 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 252725-2 chr20 39346473 39347829 + 351.373 NA Intergenic L1ME3|LINE|L1 -122403 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 243502-3 chr8 143004171 143005413 + 351.373 NA intron (NR_026913, intron 1 of 1) L1PA13|LINE|L1 8964 NR_102426 100128627 NR_102426 CDC42P3 - cell division cycle 42 pseudogene 3 pseudo 232170 chr1 227688768 227690159 + 351.373 NA Intergenic L1M3de|LINE|L1 8244 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 212317-2 chr12 4001028 4002023 + 351.373 NA Intergenic FRAM|SINE|Alu -128077 NM_001286521 57097 Hs.657268 NM_020367 ENSG00000111224 PARP11 ARTD11|C12orf6|MIB006 poly(ADP-ribose) polymerase family member 11 protein-coding 186404-3 chr21 30966016 30967054 + 351.373 NA Intergenic MER5B|DNA|hAT-Charlie 71941 NM_001099219 728299 Hs.580875 NM_001099219 ENSG00000206102 KRTAP19-8 - keratin associated protein 19-8 protein-coding 179640-4 chr3 126304320 126305390 + 351.373 NA Intergenic Intergenic 52553 NM_014079 28999 Hs.272215 NM_014079 ENSG00000163884 KLF15 KKLF Kruppel like factor 15 protein-coding 205202-4 chr15 61347452 61348429 + 351.373 NA Intergenic L1ME4c|LINE|L1 -118638 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding 259226-3 chr3 11072955 11074479 + 351.373 NA Intergenic LOR1-int|LTR|ERV1 -54493 NR_046647 100874090 Hs.628542 NR_046647 ENSG00000232287 SLC6A1-AS1 - SLC6A1 antisense RNA 1 ncRNA 202040-8 chr8 112076969 112078003 + 351.373 NA Intergenic L1PB3|LINE|L1 -566007 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 197823-2 chr7 26883865 26884921 + 351.373 NA Intergenic AluJb|SINE|Alu -19803 NM_003930 8935 Hs.200770 NM_003930 ENSG00000005020 SKAP2 PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R src kinase associated phosphoprotein 2 protein-coding 211790-2 chr11 92071515 92072476 + 351.373 NA Intergenic L1MA4|LINE|L1 -153039 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding 239725-3 chr8 88906667 88907978 + 351.373 NA Intergenic L1MA6|LINE|L1 -579839 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 201074 chr10 42524796 42525898 + 351.373 NA intron (NR_026777, intron 5 of 7) intron (NR_026777, intron 5 of 7) 27523 NR_026777 100129482 Hs.278064 NR_026777 ENSG00000234420 ZNF37BP KOX21|ZNF37B zinc finger protein 37B, pseudogene pseudo 234542 chr1 36678869 36680584 + 351.373 NA Intergenic LTR16C|LTR|ERVL -196412 NM_156039 1441 Hs.524517 NM_000760 ENSG00000119535 CSF3R CD114|GCSFR|SCN7 colony stimulating factor 3 receptor protein-coding 241218-2 chr2 226450461 226451670 + 351.373 NA Intergenic Intergenic 207728 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA 178673-4 chr8 138198882 138199972 + 351.373 NA intron (NM_015912, intron 7 of 19) LTR16|LTR|ERVL -115882 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 358577 chr18 1782800 1784881 + 351.373 NA Intergenic Intergenic -424211 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 242096 chr1 233563465 233564748 + 351.373 NA Intergenic L1MA5|LINE|L1 -50000 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding 204851-5 chr22 32706245 32707289 + 351.373 NA intron (NM_003490, intron 6 of 13) intron (NM_003490, intron 6 of 13) -94049 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding 265902-3 chrUn_KI270589v1 42215 43726 + 351.373 NA NA (CATTC)n|Satellite|Satellite NA NA 361563 chr22 27226852 27228889 + 351.373 NA Intergenic L1MC5a|LINE|L1 -3191 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding 179552-3 chr19 43957076 43958070 + 351.373 NA intron (NM_001297589, intron 1 of 4) MER4B-int|LTR|ERV1 6328 NM_013359 7638 Hs.631598 NM_013359 ENSG00000159905 ZNF221 - zinc finger protein 221 protein-coding 196066-2 chr10 107183905 107185178 + 351.373 NA Intergenic L1PREC2|LINE|L1 -19835 NM_001206569 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding 197735 chr5 43901873 43902846 + 351.373 NA Intergenic L2a|LINE|L2 -299129 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA 218466-3 chr2 84231175 84232215 + 351.373 NA Intergenic Intergenic -58987 NR_003663 388965 Hs.664098 NM_001013648 FUNDC2P2 - FUN14 domain containing 2 pseudogene 2 pseudo 254570-3 chr2 43117608 43118775 + 351.373 NA Intergenic MLT1H2-int|LTR|ERVL-MaLR -15746 NR_151714 100506047 Hs.127112 NR_151714 LINC02580 - long intergenic non-protein coding RNA 2580 ncRNA 192201-3 chr14 72325571 72326704 + 351.373 NA intron (NM_001370288, intron 2 of 16) L1ME4b|LINE|L1 -190683 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 283383 chr5 46265041 46266513 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -569397 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 314655-3 chr7 62874666 62876459 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 428494 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 208452-5 chr5 66547471 66548649 + 351.373 NA Intergenic L1ME1|LINE|L1 -36456 NR_105001 101928769 Hs.97903 NR_105001 ENSG00000250313 LINC02229 - long intergenic non-protein coding RNA 2229 ncRNA 213899-6 chr3 97150261 97151548 + 351.373 NA intron (NM_001080448, intron 3 of 17) intron (NM_001080448, intron 3 of 17) -288703 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 288302-2 chr19 12271803 12273145 + 351.373 NA exon (NM_001164276, exon 5 of 5) exon (NM_001164276, exon 5 of 5) 22138 NM_001353551 51710 Hs.296731 NM_016264 ENSG00000197857 ZNF44 GIOT-2|KOX7|ZNF|ZNF504|ZNF55|ZNF58 zinc finger protein 44 protein-coding 285667 chr10 58460435 58461928 + 351.373 NA Intergenic Intergenic -51691 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 187809-8 chr20 39966463 39967501 + 351.373 NA Intergenic Intergenic -37479 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 177795-7 chr9 77522623 77523604 + 351.373 NA intron (NR_121184, intron 4 of 4) intron (NR_121184, intron 4 of 4) 75464 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA 184910-3 chr2 136669004 136670209 + 351.373 NA Intergenic Intergenic -95939 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 252286-2 chr8 115277730 115278908 + 351.373 NA Intergenic L1MB1|LINE|L1 389694 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 189127-3 chr6 164872928 164873845 + 351.373 NA Intergenic Intergenic -51323 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA 180167-12 chr8 91675605 91676466 + 351.373 NA Intergenic Intergenic 341645 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 235069 chr2 67104734 67106395 + 351.373 NA intron (NR_110564, intron 1 of 4) intron (NR_110564, intron 1 of 4) 19118 NR_110564 102800447 Hs.144196 NR_110564 LINC01828 - long intergenic non-protein coding RNA 1828 ncRNA 183593-4 chr17 31626275 31627366 + 351.373 NA Intergenic L1ME3B|LINE|L1 51409 NR_029856 100126356 NR_029856 ENSG00000283978 MIR365B MIR365-2|MIRN365-2|hsa-mir-365b|mir-365b microRNA 365b ncRNA 207047-7 chr3 63692623 63693684 + 351.373 NA Intergenic L1MEf|LINE|L1 40478 NM_001348756 132203 Hs.130704 NM_001080537 ENSG00000188817 SNTN S100A1L|S100AL|sentan sentan, cilia apical structure protein protein-coding 177532 chr13 88511330 88512393 + 351.373 NA Intergenic Intergenic -28968 NR_047021 100874168 Hs.126406 NR_047021 LINC00433 - long intergenic non-protein coding RNA 433 ncRNA 224879 chr10 43932882 43933984 + 351.373 NA intron (NR_033846, intron 2 of 7) L1MEg|LINE|L1 21031 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 210473-4 chr4 33597047 33598399 + 351.373 NA Intergenic HUERS-P3b-int|LTR|ERV1 442170 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 221717-4 chr7 29578415 29579617 + 351.373 NA Intergenic MLT1H|LTR|ERVL-MaLR 13483 NM_001329997 222171 Hs.91109 NM_175887 ENSG00000176532 PRR15 - proline rich 15 protein-coding 229535 chr10 21829540 21830849 + 351.373 NA intron (NM_022365, intron 8 of 11) L1MB4|LINE|L1 173536 NM_022365 64215 Hs.499000 NM_022365 ENSG00000136770 DNAJC1 DNAJL1|ERdj1|HTJ1|MTJ1 DnaJ heat shock protein family (Hsp40) member C1 protein-coding 183593-3 chr10 107108818 107109690 + 351.373 NA intron (NM_001206569, intron 1 of 25) MSTA-int|LTR|ERVL-MaLR 55452 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding 178498-3 chr19 31862075 31863004 + 351.373 NA Intergenic L1MEg|LINE|L1 -163323 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA 211703-5 chr5 94064445 94065628 + 351.373 NA intron (NM_001163418, intron 1 of 8) L1MA3|LINE|L1 46627 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding 184559-6 chr3 100220397 100221195 + 351.373 NA Intergenic L1M1|LINE|L1 34972 NR_028358 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo 181397-2 chr20 42130490 42131472 + 351.373 NA intron (NM_133170, intron 19 of 31) MIRb|SINE|MIR -512604 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 203445-2 chr19 1057152 1058333 + 351.373 NA intron (NM_019112, intron 35 of 46) FLAM_C|SINE|Alu -8217 NM_001258328 23526 Hs.465521 NM_012292 ENSG00000180448 ARHGAP45 HA-1|HLA-HA1|HMHA1 Rho GTPase activating protein 45 protein-coding 183505 chr1 63233891 63234826 + 351.373 NA intron (NR_038252, intron 4 of 11) L1MB2|LINE|L1 82899 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA 260104 chr12 61315340 61316610 + 351.373 NA Intergenic MamGypLTR2c|LTR|Gypsy 876864 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding 204763-2 chr5 125538328 125539460 + 351.373 NA intron (NR_109887, intron 3 of 3) L1M5|LINE|L1 45633 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA 213635-4 chr2 226490310 226491602 + 351.373 NA Intergenic MIR3|SINE|MIR 167837 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA 197648-6 chr22 39196343 39197403 + 351.373 NA Intergenic AluSc8|SINE|Alu 44036 NM_033016 5155 Hs.1976 NM_002608 ENSG00000100311 PDGFB IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis platelet derived growth factor subunit B protein-coding 212757-5 chr8 57614033 57615195 + 351.373 NA Intergenic L1MA3|LINE|L1 -131535 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA 198350-6 chr8 142315269 142316444 + 351.373 NA intron (NM_145003, intron 7 of 13) intron (NM_145003, intron 7 of 13) 87326 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 215919 chr1 105981602 105982723 + 351.373 NA intron (NR_146609, intron 5 of 5) THE1C-int|LTR|ERVL-MaLR 46091 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA 213372-3 chr20 37585564 37586785 + 351.373 NA Intergenic L1MB7|LINE|L1 36945 NR_047461 100861522 Hs.580680 NR_047461 ENSG00000225759 LINC00489 - long intergenic non-protein coding RNA 489 ncRNA 198702-6 chr8 98644871 98645837 + 351.373 NA intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 180317 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding 218291-2 chr5 105705022 105705998 + 351.373 NA Intergenic L1MA7|LINE|L1 606036 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 265902-2 chr5 45920190 45921634 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -224532 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 196506-2 chr5 107179619 107180586 + 351.373 NA Intergenic Intergenic -169088 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 193080-3 chr2 211472862 211473927 + 351.373 NA intron (NM_001042599, intron 20 of 26) MLT1D|LTR|ERVL-MaLR 855823 NR_002763 29034 Hs.658398 NR_002763 ENSG00000280837 CPS1-IT1 CPS1-IT|CPS1IT|CPS1IT1|PRO0132 CPS1 intronic transcript 1 ncRNA 179815-5 chr3 80912261 80913183 + 351.373 NA Intergenic Intergenic -81146 NR_132411 728290 Hs.563132 NR_132411 ENSG00000243694 LINC02027 - long intergenic non-protein coding RNA 2027 ncRNA 268362 chr14 48042684 48044153 + 351.373 NA Intergenic Intergenic -248404 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 198877-2 chr11 125717718 125718615 + 351.373 NA Intergenic Intergenic -28113 NM_138294 160065 Hs.148565 NM_138294 ENSG00000171053 PATE1 PATE prostate and testis expressed 1 protein-coding 194837 chr15 71821209 71822383 + 351.373 NA TTS (NM_006901) TTS (NM_006901) 11242 NM_014249 10002 Hs.187354 NM_014249 ENSG00000278570 NR2E3 ESCS|PNR|RNR|RP37|rd7 nuclear receptor subfamily 2 group E member 3 protein-coding 296383 chr2 149335520 149336816 + 351.373 NA intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 5581 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding 203972-3 chr16 72432720 72434097 + 351.373 NA intron (NR_159371, intron 3 of 5) L1MEg|LINE|L1 231562 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA 215568-2 chr7 62867675 62868687 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 435875 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 247367-3 chr8 142328148 142329575 + 351.373 NA intron (NM_001366903, intron 6 of 9) intron (NM_001366903, intron 6 of 9) 74321 NM_001366901 203062 Hs.370931 NM_145003 ENSG00000171045 TSNARE1 - t-SNARE domain containing 1 protein-coding 240603 chr18 6643167 6644373 + 351.373 NA Intergenic Intergenic -85946 NM_001366231 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding 189742-4 chr3 162440426 162441329 + 351.373 NA Intergenic Intergenic 862424 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA 212669-2 chr5 178710240 178711537 + 351.373 NA TTS (NM_001324339) TTS (NM_001324339) 19771 NM_005649 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding 191938-6 chr2 150502159 150503737 + 351.373 NA Intergenic L1M5|LINE|L1 -15253 NM_001254738 390 Hs.6838 NM_005168 ENSG00000115963 RND3 ARHE|Rho8|RhoE|memB Rho family GTPase 3 protein-coding 193519 chr1 228242007 228242907 + 351.373 NA intron (NM_052843, intron 9 of 80) L1MEd|LINE|L1 -28793 NR_073154 574407 Hs.650039 NM_001025495 ENSG00000162913 OBSCN-AS1 C1orf145 OBSCN antisense RNA 1 ncRNA 186140-4 chr2 30496998 30498190 + 351.373 NA intron (NM_001304445, intron 3 of 7) intron (NM_001304445, intron 3 of 7) 50348 NM_001002257 253558 Hs.468048 NM_182551 ENSG00000172954 LCLAT1 1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849 lysocardiolipin acyltransferase 1 protein-coding 254394 chr14 62782839 62783988 + 351.373 NA intron (NM_139318, intron 9 of 10) intron (NM_139318, intron 9 of 10) 262045 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 220135 chr3 39522933 39524102 + 351.373 NA intron (NR_003090, intron 4 of 5) L1MEd|LINE|L1 21451 NM_001278323 4336 Hs.121333 NM_182935 ENSG00000168314 MOBP - myelin associated oligodendrocyte basic protein protein-coding 178146-11 chr5 164134907 164135865 + 351.373 NA Intergenic Intergenic 332016 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA 235157-4 chr8 114038811 114040230 + 351.373 NA Intergenic L1MA4A|LINE|L1 -602581 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 229886-3 chr17 73915524 73916797 + 351.373 NA Intergenic AluJr|SINE|Alu -87623 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA 196330 chr10 44443810 44444928 + 351.373 NA Intergenic L1MC3|LINE|L1 -59272 NM_000609 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 190620-3 chr4 32530757 32531900 + 351.373 NA Intergenic L1MA1|LINE|L1 180290 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 189302-2 chr12 89189986 89190854 + 351.373 NA Intergenic L1MA8|LINE|L1 162081 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 195891 chr17 61613474 61614583 + 351.373 NA Intergenic Intergenic -22809 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 282944 chr2 24447416 24448976 + 351.373 NA Intergenic L1MEd|LINE|L1 -43058 NM_147223 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 195100-4 chr7 62725337 62726435 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 578170 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 224791 chr11 90738973 90740111 + 351.373 NA intron (NR_104190, intron 3 of 6) intron (NR_104190, intron 3 of 6) 129660 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 211088-5 chrX 58418290 58419664 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -508344 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 204939-2 chr11 116152675 116153867 + 351.373 NA Intergenic L1MD1|LINE|L1 -393071 NR_034148 283143 Hs.130499 NR_034148 LINC00900 - long intergenic non-protein coding RNA 900 ncRNA 202830-3 chr1 218582348 218583587 + 351.373 NA intron (NR_031644, intron 2 of 6) L1ME2|LINE|L1 72872 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA 177444-5 chr20 59122977 59123896 + 351.373 NA Intergenic Intergenic -67584 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding 355414-2 chr4 84259933 84261787 + 351.373 NA intron (NR_125909, intron 4 of 8) L1PB4|LINE|L1 38309 NR_125909 101928978 Hs.647977 NR_125909 ENSG00000250546 LOC101928978 - uncharacterized LOC101928978 ncRNA 229008 chr1 95029421 95030577 + 351.373 NA intron (NR_131032, intron 1 of 2) intron (NR_131032, intron 1 of 2) -31597 NR_132786 101928098 Hs.730090 NR_132786 ENSG00000230427 LOC101928098 - uncharacterized LOC101928098 ncRNA 202040-7 chr6 96789618 96790664 + 351.373 NA Intergenic Intergenic 47336 NM_001143957 81491 Hs.221364 NM_030784 ENSG00000112218 GPR63 PSP24(beta)|PSP24B G protein-coupled receptor 63 protein-coding 266868-2 chr4 274604 276118 + 351.373 NA intron (NM_001137608, intron 3 of 3) L1MB2|LINE|L1 30113 NM_001137608 654254 Hs.698668 NM_001137608 ENSG00000186777 ZNF732 - zinc finger protein 732 protein-coding 179640-2 chr2 19796223 19797180 + 351.373 NA Intergenic Intergenic -72153 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA 198350-7 chrX 88956850 88957672 + 351.373 NA Intergenic Intergenic 210036 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding 186228 chr10 43503047 43503942 + 351.373 NA Intergenic Tigger3b|DNA|TcMar-Tigger 64965 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 193080-5 chr8 77702409 77703241 + 351.373 NA Intergenic L1MB3|LINE|L1 252128 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA 186404 chr10 51260402 51261622 + 351.373 NA intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) -38561 NR_030336 693190 NR_030336 ENSG00000207813 MIR605 MIRN605|hsa-mir-605|mir-605 microRNA 605 ncRNA 190181-4 chr3 4765578 4766502 + 351.373 NA intron (NM_001168272, intron 43 of 60) intron (NM_001168272, intron 43 of 60) -14450 NR_004428 100126791 Hs.663059 NR_004428 ENSG00000235947 EGOT EGO|NCRNA00190 eosinophil granule ontogeny transcript ncRNA 187019-2 chr10 67165859 67166939 + 351.373 NA intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) 154133 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 243063 chr14 76687104 76688324 + 351.373 NA Intergenic MER50|LTR|ERV1 -73754 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 181133-6 chr8 127262758 127263631 + 351.373 NA intron (NR_117099, intron 1 of 3) L1MA7|LINE|L1 18557 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA 197911 chr10 9424022 9425506 + 351.373 NA Intergenic Intergenic -129171 NR_120635 101928272 Hs.650697 NR_120635 LOC101928272 - uncharacterized LOC101928272 ncRNA 202918-4 chr3 104532271 104533538 + 351.373 NA Intergenic L1PA13|LINE|L1 -833809 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 179288-4 chr8 129596907 129597712 + 351.373 NA intron (NR_130917, intron 1 of 3) L1MB7|LINE|L1 -22291 NR_130918 137196 Hs.679457 NR_130917 ENSG00000229140 CCDC26 RAM CCDC26 long non-coding RNA ncRNA 179815-3 chr11 10203563 10204632 + 351.373 NA intron (NM_030962, intron 1 of 39) L1MEc|LINE|L1 90110 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding 223825-4 chr8 88428721 88429768 + 351.373 NA Intergenic L1MA4|LINE|L1 -101761 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 245698-4 chr2 79413437 79414712 + 351.373 NA Intergenic Intergenic 86770 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 182802-3 chr5 150947573 150948764 + 351.373 NA Intergenic Tigger1|DNA|TcMar-Tigger -1584 NR_026867 134466 Hs.661876 NR_026867 ZNF300P1 - zinc finger protein 300 pseudogene 1 pseudo 462320 chr7 62745229 62747339 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 557772 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 178673-5 chr9 99088447 99089275 + 351.373 NA Intergenic Intergenic -16252 NM_001306210 7046 Hs.494622 NM_004612 ENSG00000106799 TGFBR1 AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TBR-i|TBRI|TGFR-1|tbetaR-I transforming growth factor beta receptor 1 protein-coding 293924 chr5 114716050 114717415 + 351.373 NA intron (NR_130785, intron 1 of 12) L1MC4|LINE|L1 56681 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA 340656 chr10 67590640 67592130 + 351.373 NA intron (NM_001127384, intron 3 of 17) L1MEg|LINE|L1 74275 NM_001291133 29119 Hs.21375 NM_013266 ENSG00000183230 CTNNA3 ARVD13|VR22 catenin alpha 3 protein-coding 178059-2 chr2 121668109 121668978 + 351.373 NA intron (NR_037857, intron 2 of 3) AluSz|SINE|Alu 18554 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 183944-11 chr7 39712479 39713670 + 351.373 NA Intergenic Intergenic -20494 NR_026999 349114 Hs.414183 NM_198284 LINC00265 NCRNA00265 long intergenic non-protein coding RNA 265 ncRNA 196593 chr15 27628413 27629299 + 351.373 NA Intergenic L1MEg|LINE|L1 -467537 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 184998-10 chr8 23600797 23601702 + 351.373 NA Intergenic L1MEf|LINE|L1 72293 NM_001317812 51312 Hs.596025 NM_016612 ENSG00000147454 SLC25A37 HT015|MFRN|MFRN1|MSC|MSCP|PRO1278|PRO1584|PRO2217 solute carrier family 25 member 37 protein-coding 179113-4 chr4 59232759 59233768 + 351.373 NA Intergenic L1PA13|LINE|L1 219690 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 181572-3 chr16 51267404 51268750 + 351.373 NA intron (NR_039672, intron 6 of 6) THE1D|LTR|ERVL-MaLR -116805 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding 190357-5 chr14 86344069 86344923 + 351.373 NA Intergenic L1PA13|LINE|L1 409818 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 179376-3 chr14 82127685 82128618 + 351.373 NA Intergenic Intergenic -385013 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 213459-3 chr14 48408455 48409530 + 351.373 NA Intergenic L1MA4|LINE|L1 -613978 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 214513-2 chr11 93974565 93975325 + 351.373 NA Intergenic HAL1|LINE|L1 -46409 NM_001098672 341208 Hs.669645 NM_001098672 ENSG00000181333 HEPHL1 ZP hephaestin like 1 protein-coding 221453 chr2 11034959 11036175 + 351.373 NA Intergenic L1PB3|LINE|L1 96609 NR_040080 285150 Hs.329841 NM_182586 ENSG00000145063 FLJ33534 - uncharacterized LOC285150 ncRNA 207223 chr14 62828999 62829948 + 351.373 NA intron (NM_139318, intron 8 of 10) THE1D-int|LTR|ERVL-MaLR 215985 NM_172375 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 188863-3 chr18 13169230 13170271 + 351.373 NA Intergenic L1PB1|LINE|L1 -49010 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 183856-5 chr4 30504913 30505862 + 351.373 NA Intergenic L1P4a|LINE|L1 -214982 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 226284-2 chr8 141675824 141676784 + 351.373 NA Intergenic Intergenic 110009 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 195803-9 chr8 130694468 130695552 + 351.373 NA Intergenic Kanga1c|DNA|TcMar-Tc2 -251336 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 221805-3 chr6 148992829 148993939 + 351.373 NA intron (NM_005715, intron 5 of 7) intron (NM_005715, intron 5 of 7) -28700 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA 190445 chr14 72146141 72147342 + 351.373 NA intron (NM_001370288, intron 2 of 16) MSTD-int|LTR|ERVL-MaLR 213214 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 190532 chr10 90492594 90493686 + 351.373 NA intron (NR_110657, intron 2 of 6) L1P4a|LINE|L1 47665 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA 206256-2 chr10 22941256 22942428 + 351.373 NA intron (NM_001282747, intron 2 of 15) L2a|LINE|L2 13789 NM_001282745 219681 Hs.659807 NM_173081 ENSG00000165309 ARMC3 CT81|KU-CT-1 armadillo repeat containing 3 protein-coding 186228-9 chr7 4294316 4295295 + 351.373 NA Intergenic Tigger7|DNA|TcMar-Tigger -159968 NR_158215 105375131 NR_158215 LOC105375131 - uncharacterized LOC105375131 ncRNA 217237-4 chr7 114113954 114115375 + 351.373 NA intron (NR_033766, intron 1 of 19) intron (NR_033766, intron 1 of 19) 28337 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding 211703-4 chr20 39313740 39315182 + 351.373 NA Intergenic L1MD3|LINE|L1 -89713 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 186843-2 chr18 55679142 55680261 + 351.373 NA Intergenic Intergenic -43744 NM_001243226 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding 202303-4 chr7 19184821 19185673 + 351.373 NA Intergenic L1MA4|LINE|L1 -39826 NM_152898 222894 Hs.592168 NM_152898 ENSG00000146618 FERD3L N-TWIST|NATO3|NTWIST|PTFB|bHLHa31 Fer3 like bHLH transcription factor protein-coding 189390-4 chr7 62882780 62883881 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 420726 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 183768 chr1 38683755 38684679 + 351.373 NA Intergenic L1ME3D|LINE|L1 175555 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding 210649 chr9 81449844 81451043 + 351.373 NA Intergenic MIRb|SINE|MIR 239092 NM_001303104 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding 205993-2 chr5 12147998 12149117 + 351.373 NA Intergenic L1M3|LINE|L1 -244111 NM_001288717 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 201161-3 chr5 36013292 36014152 + 351.373 NA Intergenic THE1D-int|LTR|ERVL-MaLR -12700 NM_001171873 133688 Hs.254699 NM_152404 ENSG00000145626 UGT3A1 - UDP glycosyltransferase family 3 member A1 protein-coding 194485 chr16 6477102 6478204 + 351.373 NA intron (NM_018723, intron 2 of 15) Tigger1|DNA|TcMar-Tigger -296156 NM_001142334 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding 199053-5 chrX 149409827 149410751 + 351.373 NA Intergenic L1MB8|LINE|L1 95017 NM_006123 3423 Hs.6795 NM_000202 ENSG00000010404 IDS MPS2|SIDS iduronate 2-sulfatase protein-coding 209858 chr10 38489920 38491164 + 351.373 NA Intergenic Intergenic 62396 NR_024497 399744 Hs.497951 NM_001013665 LINC00999 - long intergenic non-protein coding RNA 999 ncRNA 177356-8 chr8 79586300 79587305 + 351.373 NA Intergenic Intergenic -24315 NM_001199214 11075 Hs.521651 NM_007029 ENSG00000104435 STMN2 SCG10|SCGN10 stathmin 2 protein-coding 225318 chr11 55015503 55016412 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -246198 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 291464-2 chr11 50651760 50653195 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 243330 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 204499-4 chr14 71149657 71150664 + 351.373 NA Intergenic MER9a3|LTR|ERVK -170316 NM_001354286 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 231994-4 chr8 129428465 129429883 + 351.373 NA intron (NR_130920, intron 1 of 3) L1PB1|LINE|L1 54968 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA 207310-3 chr19 19838048 19838973 + 351.373 NA Intergenic Intergenic -16760 NM_001099269 440515 Hs.351906 NM_001099269 ENSG00000081665 ZNF506 - zinc finger protein 506 protein-coding 250968 chr22 47466568 47467936 + 351.373 NA intron (NR_109967, intron 1 of 2) L1MEi|LINE|L1 19859 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LINC01644 LL22NC03-75H12.2 long intergenic non-protein coding RNA 1644 ncRNA 183768-4 chr20 41992838 41994060 + 351.373 NA Intergenic L1M6|LINE|L1 -375072 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 273896 chr18 78040569 78041973 + 351.373 NA Intergenic L1MC5a|LINE|L1 -47544 NR_104127 101927715 Hs.385670 NR_104127 LINC01029 - long intergenic non-protein coding RNA 1029 ncRNA 219433-3 chr5 159300723 159301788 + 351.373 NA Intergenic Intergenic 29218 NM_002187 3593 Hs.674 NM_002187 ENSG00000113302 IL12B CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2 interleukin 12B protein-coding 194309 chr15 98269079 98269926 + 351.373 NA Intergenic L1MCc|LINE|L1 62056 NR_146566 105371011 NR_146566 LINC02351 - long intergenic non-protein coding RNA 2351 ncRNA 256064 chr14 37614449 37616147 + 351.373 NA intron (NM_001310135, intron 2 of 32) L1ME1|LINE|L1 19669 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding 216797-3 chr2 123055598 123056504 + 351.373 NA Intergenic L1M4c|LINE|L1 17430 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 184735-6 chr6 169403862 169404683 + 351.373 NA Intergenic AluSz|SINE|Alu -150158 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding 198702-4 chr5 42349233 42350440 + 351.373 NA Intergenic Intergenic -73603 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 207925-2 chr8 46368428 46369618 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 248620 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 218554-3 chr7 99938675 99939736 + 351.373 NA Intergenic HERV16-int|LTR|ERVL -9585 NM_181538 349149 Hs.647524 NM_181538 ENSG00000176402 GJC3 CX29|CX30.2|CX31.3|GJE1 gap junction protein gamma 3 protein-coding 242711 chr10 25091283 25092509 + 351.373 NA Intergenic L1MA2|LINE|L1 -21162 NR_120649 101929025 Hs.553324 NR_120649 ENSG00000231422 LINC01516 - long intergenic non-protein coding RNA 1516 ncRNA 180606-2 chr19 46100022 46101238 + 351.373 NA Intergenic PRIMA4_LTR|LTR|ERV1 -23001 NR_163177 444882 Hs.531310 NM_001002923 ENSG00000204869 IGFL4 - IGF like family member 4 protein-coding 224967-3 chr5 9839530 9840800 + 351.373 NA intron (NR_027112, intron 4 of 12) intron (NR_027112, intron 4 of 12) -14212 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA 218115-3 chr2 63265549 63266517 + 351.373 NA intron (NR_148704, intron 14 of 18) L1MA7|LINE|L1 -146491 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 193519-2 chr19 7084672 7085511 + 351.373 NA 3' UTR (NM_001044387, exon 8 of 8) 3' UTR (NM_001044387, exon 8 of 8) 15388 NM_001044387 79230 Hs.591380 NM_024341 ENSG00000130544 ZNF557 - zinc finger protein 557 protein-coding 177619-6 chr7 6679225 6680072 + 351.373 NA Intergenic AluJo|SINE|Alu 27299 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 255888-2 chr7 92982364 92983544 + 351.373 NA Intergenic L1M4|LINE|L1 135025 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding 195452-2 chr14 62506302 62507431 + 351.373 NA Intergenic L1PA15|LINE|L1 -366893 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 229623 chr12 118677775 118679153 + 351.373 NA Intergenic MLT1L|LTR|ERVL-MaLR 83215 NR_134999 105370014 Hs.550870 NR_134998 ENSG00000256750 LINC02423 - long intergenic non-protein coding RNA 2423 ncRNA 181836-7 chr8 81205344 81206333 + 351.373 NA Intergenic L1ME3G|LINE|L1 -74698 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding 188863-7 chr5 37280999 37281984 + 351.373 NA Intergenic Intergenic -32063 NM_023073 65250 Hs.586199 NM_023073 ENSG00000197603 CPLANE1 C5orf42|Hug|JBTS17|OFD6 ciliogenesis and planar polarity effector 1 protein-coding 217588-5 chr8 46069616 46070735 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 547468 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 180957-2 chr3 33289470 33290548 + 351.373 NA intron (NM_012157, intron 1 of 14) intron (NM_012157, intron 1 of 14) 12567 NM_001349325 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding 195364-2 chr14 84357618 84358654 + 351.373 NA Intergenic L1MA3|LINE|L1 -913796 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 223913-3 chr2 119503655 119504807 + 351.373 NA intron (NM_002980, intron 1 of 12) L1PA4|LINE|L1 20221 NM_002980 6344 Hs.42091 NM_002980 ENSG00000080293 SCTR SR secretin receptor protein-coding 180343 chr13 92454472 92455543 + 351.373 NA intron (NM_004466, intron 7 of 7) intron (NM_004466, intron 7 of 7) -35156 NR_049840 100847092 NR_049840 ENSG00000263741 MIR548AS - microRNA 548as ncRNA 198438-5 chr5 172511655 172512563 + 351.373 NA Intergenic L1MEg|LINE|L1 46905 NR_146726 105377728 Hs.131465 NR_146726 LINC01944 CTB-54I1.1 long intergenic non-protein coding RNA 1944 ncRNA 194046-3 chr2 122128376 122129559 + 351.373 NA Intergenic L1MA4A|LINE|L1 373316 NM_004622 7247 Hs.75066 NM_004622 ENSG00000211460 TSN BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN translin protein-coding 197296-2 chr2 238749674 238750750 + 351.373 NA Intergenic L1MEd|LINE|L1 97695 NR_157851 100287387 Hs.516864 NR_157851 LOC100287387 - uncharacterized LOC100287387 ncRNA 199229 chr2 18078587 18079723 + 351.373 NA Intergenic Intergenic 200488 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding 182187-6 chr2 83057332 83058181 + 351.373 NA Intergenic Intergenic 200953 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo 189830-5 chrX 75668407 75669359 + 351.373 NA Intergenic L1MDa|LINE|L1 74196 NR_030737 286495 Hs.567832 NR_030737 TTC3P1 RNF105L|TTC3L tetratricopeptide repeat domain 3 pseudogene 1 pseudo 222331 chr16 6320263 6321169 + 351.373 NA intron (NM_018723, intron 2 of 15) MER3|DNA|hAT-Charlie 301013 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding 187634-2 chr2 79274733 79275775 + 351.373 NA Intergenic Intergenic -115501 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 214338-5 chr6 82676369 82677425 + 351.373 NA Intergenic Intergenic 312653 NM_001166392 7162 Hs.71947 NM_006670 ENSG00000146242 TPBG 5T4|5T4AG|M6P1|WAIF1 trophoblast glycoprotein protein-coding 200371-7 chr8 43818033 43818974 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 526061 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 319750 chr8 133366879 133368642 + 351.373 NA Intergenic MLT1H2|LTR|ERVL-MaLR -70456 NM_001258433 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding 190269-5 chr3 43838122 43839171 + 351.373 NA Intergenic L1MEd|LINE|L1 -147052 NM_001346469 55129 Hs.656657 NM_018075 ENSG00000160746 ANO10 SCAR10|TMEM16K anoctamin 10 protein-coding 198350-4 chr5 113473346 113474772 + 351.373 NA intron (NM_001085377, intron 1 of 18) intron (NM_001085377, intron 1 of 18) 14394 NM_001085377 4163 Hs.593171 NM_002387 ENSG00000171444 MCC MCC1 MCC regulator of WNT signaling pathway protein-coding 185789-6 chr7 68912199 68913176 + 351.373 NA Intergenic Intergenic 684937 NR_148927 100507468 Hs.362492 NR_108105 CT66 - cancer/testis associated transcript 66 ncRNA 192641 chr10 54300916 54301881 + 351.373 NA intron (NM_001354411, intron 8 of 34) intron (NM_001354411, intron 8 of 34) -184832 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 182363-3 chr18 10502905 10504357 + 351.373 NA Intergenic L1MB5|LINE|L1 -22396 NM_003826 8774 Hs.464622 NM_003826 ENSG00000134265 NAPG GAMMASNAP NSF attachment protein gamma protein-coding 212230 chr10 131564839 131566072 + 351.373 NA Intergenic HAL1M8|LINE|L1 224744 NR_038365 399827 Hs.523353 NM_001001677 ENSG00000189275 LINC01164 - long intergenic non-protein coding RNA 1164 ncRNA 239812-2 chr3 114228607 114230128 + 351.373 NA Intergenic L1MEd|LINE|L1 8211 NM_007136 7634 Hs.271079 NM_007136 ENSG00000174255 ZNF80 pT17 zinc finger protein 80 protein-coding 259313 chr8 88766895 88768045 + 351.373 NA Intergenic MER73|LTR|ERVL -439987 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 211439-2 chr4 106089503 106090836 + 351.373 NA intron (NM_001290768, intron 26 of 26) MSTB-int|LTR|ERVL-MaLR -67691 NR_125928 101929577 Hs.631131 NR_125928 ENSG00000249635 LOC101929577 - uncharacterized LOC101929577 ncRNA 199580 chr2 79250009 79250976 + 351.373 NA Intergenic Intergenic -90739 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 200986 chr1 113559321 113560262 + 351.373 NA intron (NM_001142782, intron 2 of 20) AluSx1|SINE|Alu 169276 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 196418 chr1 36901603 36902417 + 351.373 NA intron (NM_000831, intron 1 of 15) L1MC1|LINE|L1 132505 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding 187370-7 chr2 51435471 51436309 + 351.373 NA intron (NR_135237, intron 4 of 10) L1MC2|LINE|L1 403289 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 214162-2 chr2 22722987 22724375 + 351.373 NA Intergenic L1MA7|LINE|L1 187202 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 185701-8 chr8 115308394 115309195 + 351.373 NA Intergenic Intergenic 359219 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 188073-5 chr4 42688968 42690134 + 351.373 NA Intergenic Intergenic -32446 NM_006095 10396 Hs.435052 NM_006095 ENSG00000124406 ATP8A1 ATPASEII|ATPIA|ATPP2 ATPase phospholipid transporting 8A1 protein-coding 196418-3 chr21 25414392 25415403 + 351.373 NA intron (NR_024027, intron 4 of 4) MSTB|LTR|ERVL-MaLR 16804 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA 185965-2 chr22 48732518 48733579 + 351.373 NA intron (NM_001082967, intron 3 of 3) Tigger1|DNA|TcMar-Tigger -47247 NR_039761 100616415 NR_039761 ENSG00000266887 MIR4535 - microRNA 4535 ncRNA 182451 chr12 40531919 40533001 + 351.373 NA intron (NM_173600, intron 121 of 173) intron (NM_173600, intron 121 of 173) 139066 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding 181572-13 chr7 62832258 62833321 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 471267 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 186052 chr10 39113959 39115014 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 417890 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 313864 chr10 64326563 64327985 + 351.373 NA Intergenic L1MEj|LINE|L1 -498254 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 187458-6 chr7 143166068 143167300 + 351.373 NA intron (NM_001130026, intron 8 of 10) intron (NM_001130026, intron 8 of 10) -16735 NM_176881 259285 Hs.553660 NM_176881 ENSG00000236398 TAS2R39 T2R39|T2R57 taste 2 receptor member 39 protein-coding 244380-2 chr5 153277351 153278689 + 351.373 NA Intergenic Intergenic -212504 NR_047578 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding 243238 chr17 55924312 55925654 + 351.373 NA Intergenic Tigger4b|DNA|TcMar-Tigger 173878 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding 211000-6 chr7 4658680 4659663 + 351.373 NA Intergenic AluSg|SINE|Alu -23124 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 182187-9 chr6 169375253 169376272 + 351.373 NA Intergenic Intergenic -121648 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding 182099-6 chr7 44316087 44316877 + 351.373 NA intron (NM_172081, intron 1 of 18) L1MB4|LINE|L1 9112 NM_172078 816 Hs.351887 NM_001220 ENSG00000058404 CAMK2B CAM2|CAMK2|CAMKB|MRD54 calcium/calmodulin dependent protein kinase II beta protein-coding 182275-4 chr16 78191064 78192122 + 351.373 NA intron (NM_001291997, intron 4 of 7) intron (NM_001291997, intron 4 of 7) 91939 NR_120435 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding 214074-5 chr8 133998731 133999983 + 351.373 NA Intergenic L1MA9|LINE|L1 112861 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 187809-4 chr14 72585152 72586020 + 351.373 NA Intergenic LTR16A|LTR|ERVL 68766 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 317290 chr10 94026564 94027969 + 351.373 NA intron (NM_001288989, intron 1 of 32) L2b|LINE|L2 33335 NM_016341 51196 Hs.655033 NM_016341 ENSG00000138193 PLCE1 NPHS3|PLCE|PPLC phospholipase C epsilon 1 protein-coding 223913-2 chr11 70750375 70751599 + 351.373 NA intron (NM_012309, intron 13 of 24) L1MEf|LINE|L1 -89146 NR_110766 22941 Hs.268726 NM_012309 ENSG00000162105 SHANK2 AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3 SH3 and multiple ankyrin repeat domains 2 protein-coding 225845-4 chr6 76163908 76165482 + 351.373 NA Intergenic L2|LINE|L2 -92017 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 288653-2 chr16 49158809 49160089 + 351.373 NA Intergenic MIRb|SINE|MIR 122389 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding 219960-3 chr8 64923009 64924244 + 351.373 NA Intergenic AluYc3|SINE|Alu -124889 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding 180079-4 chr3 54645154 54646071 + 351.373 NA intron (NM_018398, intron 11 of 37) intron (NM_018398, intron 11 of 37) -5755 NR_027122 790952 Hs.720658 NR_027122 ENSG00000265992 ESRG HESRG embryonic stem cell related ncRNA 199844-2 chr18 1832507 1833597 + 351.373 NA Intergenic L1MCa|LINE|L1 -473423 NR_110327 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 178937 chr12 13513519 13514442 + 351.373 NA Intergenic L1MB3|LINE|L1 -137235 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA 228305 chr7 53713580 53714662 + 351.373 NA intron (NR_038371, intron 4 of 5) MLT1E2|LTR|ERVL-MaLR 97810 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 226812-3 chr7 8459612 8460764 + 351.373 NA intron (NM_152745, intron 2 of 2) intron (NM_152745, intron 2 of 2) 26579 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding 256766 chr11 55082747 55083906 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -178829 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 187897-10 chr5 46303811 46304617 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -607834 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 301127-2 chr3 114770545 114772053 + 351.373 NA intron (NM_001164343, intron 4 of 11) intron (NM_001164343, intron 4 of 11) -12192 NM_001164344 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding 185437-3 chr12 30153354 30154189 + 351.373 NA Intergenic Charlie15b|DNA|hAT-Charlie -369012 NM_175861 83857 Hs.401954 NM_031920 ENSG00000133687 TMTC1 ARG99|OLF|TMTC1A transmembrane O-mannosyltransferase targeting cadherins 1 protein-coding 186931-2 chr10 56164051 56165257 + 351.373 NA Intergenic THE1D-int|LTR|ERVL-MaLR 196605 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 187370 chr11 50371932 50372678 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -36842 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 182187-7 chr4 106397081 106398001 + 351.373 NA Intergenic L1M4c|LINE|L1 -30106 NM_001195138 100507096 Hs.722750 NM_001195138 ENSG00000250298 GIMD1 - GIMAP family P-loop NTPase domain containing 1 protein-coding 220223-2 chr8 140030572 140031633 + 351.373 NA intron (NM_001160372, intron 17 of 22) intron (NM_001160372, intron 17 of 22) 69433 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 182099-3 chr3 59688341 59689419 + 351.373 NA Intergenic MER58A|DNA|hAT-Charlie -30383 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 237001 chr1 112117201 112118369 + 351.373 NA Intergenic L1M6|LINE|L1 127249 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 193695-8 chr21 21847046 21848339 + 351.373 NA Intergenic L1M2|LINE|L1 100707 NR_109958 101927821 Hs.334181 NR_109958 ENSG00000233997 LINC01425 - long intergenic non-protein coding RNA 1425 ncRNA 284700-2 chr16 35439274 35441097 + 351.373 NA Intergenic Intergenic 40411 NR_026980 146481 Hs.316564 NR_026980 FRG2DP - FSHD region gene 2 family member D, pseudogene pseudo 188424-2 chr16 80844166 80845064 + 351.373 NA intron (NR_131948, intron 1 of 2) L1M3c|LINE|L1 -40017 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding 193080 chr10 32598964 32600005 + 351.373 NA intron (NM_001321115, intron 19 of 43) L1M4c|LINE|L1 153344 NM_001321115 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding 180518-2 chr12 1899817 1900721 + 351.373 NA intron (NM_172364, intron 6 of 37).2 AluJr|SINE|Alu 18383 NM_172364 93589 Hs.13768 NM_172364 ENSG00000151062 CACNA2D4 RCD4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 protein-coding 200546-3 chrX 83025824 83026900 + 351.373 NA Intergenic L1MA2|LINE|L1 -481928 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding 238231 chr2 60152411 60153769 + 351.373 NA Intergenic Intergenic 229946 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 201688 chr10 96175126 96175924 + 351.373 NA intron (NR_138482, intron 3 of 4) ERV3-16A3_LTR|LTR|ERVL 44903 NM_001330734 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding 178937-5 chr20 48444684 48445649 + 351.373 NA Intergenic LTR45C|LTR|ERV1 85255 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA 191499 chr21 44386378 44387552 + 351.373 NA intron (NM_003307, intron 9 of 31) AluJb|SINE|Alu 33364 NM_001320351 7226 Hs.369759 NM_003307 ENSG00000142185 TRPM2 EREG1|KNP3|LTRPC2|LTrpC-2|NUDT9H|NUDT9L1|TRPC7 transient receptor potential cation channel subfamily M member 2 protein-coding 242448 chr19 48524063 48525459 + 351.373 NA Intergenic MLT1G1|LTR|ERVL-MaLR -11572 NM_001080434 114783 Hs.207426 NM_001080434 ENSG00000142235 LMTK3 LMR3|PPP1R101|TYKLM3 lemur tyrosine kinase 3 protein-coding 204324-4 chr8 36941173 36942254 + 351.373 NA Intergenic L1MA5|LINE|L1 157339 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding 206169 chr11 101289274 101290645 + 351.373 NA Intergenic Intergenic -160146 NM_001271162 5241 Hs.32405 NM_000926 ENSG00000082175 PGR NR3C3|PR progesterone receptor protein-coding 182890 chr10 36290371 36291193 + 351.373 NA Intergenic L1MA3|LINE|L1 512480 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 202040-4 chr19 36442043 36442966 + 351.373 NA Intergenic L1MA3|LINE|L1 21330 NR_033748 644189 Hs.608412 NR_033748 LOC644189 - acyl-CoA thioesterase 4 pseudogene pseudo 214953-4 chr8 79015519 79016561 + 351.373 NA Intergenic L1MA2|LINE|L1 178511 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA 193695-4 chr11 81728891 81729713 + 351.373 NA Intergenic L1MB8|LINE|L1 161534 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 187458-3 chr14 56764581 56765712 + 351.373 NA Intergenic Intergenic 40521 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding 261598 chr1 12668145 12669403 + 351.373 NA Intergenic MLT1E1A|LTR|ERVL-MaLR 24227 NM_001013630 343066 Hs.209954 NM_001013630 ENSG00000204518 AADACL4 - arylacetamide deacetylase like 4 protein-coding 178761-5 chr8 84315382 84316434 + 351.373 NA intron (NM_001354320, intron 2 of 9) intron (NM_001354320, intron 2 of 9) -99576 NM_001354308 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 263003-3 chr2 119852587 119853825 + 351.373 NA intron (NM_002830, intron 2 of 26) L1MDa|LINE|L1 93284 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding 213547-3 chr8 132265004 132266351 + 351.373 NA intron (NM_004519, intron 1 of 14) intron (NM_004519, intron 1 of 14) -160412 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding 202918-5 chr5 37596782 37598069 + 351.373 NA intron (NM_001345998, intron 9 of 17) L1ME1|LINE|L1 218107 NM_001345999 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding 208452-4 chr22 32940550 32941429 + 351.373 NA intron (NM_003490, intron 3 of 13) intron (NM_003490, intron 3 of 13) 65832 NM_133633 8224 Hs.608750 NM_003490 ENSG00000185666 SYN3 - synapsin III protein-coding 219345-2 chr2 116293005 116294003 + 351.373 NA Intergenic L1MB1|LINE|L1 949689 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 217852-2 chr17 71897880 71899235 + 351.373 NA Intergenic Intergenic 127422 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 191762-12 chr9 113000880 113002101 + 351.373 NA intron (NM_001101338, intron 3 of 4) intron (NM_001101338, intron 3 of 4) 10702 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding 206432-4 chr19 52330552 52331523 + 351.373 NA Intergenic L1MC3|LINE|L1 -5206 NM_001161425 162963 Hs.147025 NM_173530 ENSG00000167554 ZNF610 - zinc finger protein 610 protein-coding 201161-5 chr7 16386729 16387879 + 351.373 NA intron (NM_001101426, intron 2 of 9) L1M4b|LINE|L1 34234 NM_001368197 729920 Hs.636502 NM_001101417 ENSG00000214960 CRPPA ISPD|LGMDR20|MDDGA7|MDDGC7|Nip|hISPD CDP-L-ribitol pyrophosphorylase A protein-coding 253428-3 chr20 46983401 46984618 + 351.373 NA intron (NM_172110, intron 1 of 13) intron (NM_172110, intron 1 of 13) 89166 NM_005244 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding 261158-2 chr5 45455115 45456118 + 351.373 NA intron (NM_021072, intron 3 of 7) intron (NM_021072, intron 3 of 7) 240764 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 190181-8 chr8 81384907 81385904 + 351.373 NA Intergenic L1MA4A|LINE|L1 62034 NM_001348381 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding 211790-4 chr14 28361492 28362849 + 351.373 NA Intergenic L1M4|LINE|L1 403149 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA 178586-7 chr3 90580133 90581013 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 1472952 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 184559-2 chr10 67840689 67841836 + 351.373 NA Intergenic MSTA-int|LTR|ERVL-MaLR -3074 NM_021800 56521 Hs.260720 NM_021800 ENSG00000108176 DNAJC12 HPANBH4|JDP1 DnaJ heat shock protein family (Hsp40) member C12 protein-coding 246752 chr17 3352804 3354052 + 351.373 NA Intergenic L1M1|LINE|L1 43183 NR_024128 390756 Hs.632245 NM_001005334 ENSG00000180068 OR3A4P OLFRA05|OLFRA06|OR17-13|OR17-16|OR17-24|OR17-25|OR24|OR25|OR3A4|OR3A5P olfactory receptor family 3 subfamily A member 4 pseudogene pseudo 183768-7 chr5 123824061 123824984 + 351.373 NA Intergenic L1MA4A|LINE|L1 279105 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 239022 chr12 108259764 108260971 + 351.373 NA Intergenic L1M4|LINE|L1 60295 NM_001142345 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding 217500 chr16 13656585 13657843 + 351.373 NA Intergenic Intergenic -262943 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 177531-4 chr20 42814062 42814897 + 351.373 NA intron (NM_133170, intron 2 of 31) MIRc|SINE|MIR 128996 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 189302-5 chr7 6685126 6686083 + 351.373 NA Intergenic L1M5|LINE|L1 21343 NM_016265 7559 Hs.431471 NM_006956 ENSG00000164631 ZNF12 GIOT-3|HZF11|KOX3|ZNF325 zinc finger protein 12 protein-coding 193607-8 chr5 8553157 8554214 + 351.373 NA Intergenic Intergenic 92760 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA 224703-2 chr3 16525144 16526124 + 351.373 NA Intergenic MLT1K|LTR|ERVL-MaLR -10684 NR_103843 100996597 Hs.599432 NR_103843 ENSG00000233570 LINC00690 - long intergenic non-protein coding RNA 690 ncRNA 195803-6 chr2 172511913 172513218 + 351.373 NA Intergenic MER72|LTR|ERV1 -42808 NR_103731 5163 Hs.470633 NM_002610 ENSG00000152256 PDK1 - pyruvate dehydrogenase kinase 1 protein-coding 201952-6 chr5 20209503 20210586 + 351.373 NA intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -95507 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA 183153-11 chr8 26155318 26156273 + 351.373 NA Intergenic LTR16|LTR|ERVL -110382 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding 185701-2 chr1 75366830 75367845 + 351.373 NA intron (NM_001320283, intron 1 of 21) L1M3a|LINE|L1 232949 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding 181397-5 chr6 162934470 162935487 + 351.373 NA intron (NM_001080379, intron 2 of 4) L1MA4|LINE|L1 119183 NR_110872 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA 296911-2 chr9 32806527 32808049 + 351.373 NA Intergenic Intergenic 23748 NM_212558 401498 Hs.522063 NM_212558 ENSG00000188133 TMEM215 - transmembrane protein 215 protein-coding 233927-2 chr2 150899507 150900818 + 351.373 NA Intergenic Intergenic 271265 NR_110246 101929282 Hs.126866 NR_110244 ENSG00000224048 LINC02612 - long intergenic non-protein coding RNA 2612 ncRNA 200371-6 chr3 118371821 118372721 + 351.373 NA Intergenic Intergenic -269497 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 237001-4 chr5 11895698 11896793 + 351.373 NA intron (NM_001288717, intron 1 of 20) intron (NM_001288717, intron 1 of 20) 8201 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 183329 chr10 39037987 39038936 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 341865 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 183241-10 chr8 136050411 136051049 + 351.373 NA Intergenic MIR|SINE|MIR -480068 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 244205 chr11 19131197 19132478 + 351.373 NA intron (NM_001001483, intron 1 of 15) AluSx|SINE|Alu 14669 NM_019028 54503 Hs.188569 NM_019028 ENSG00000177054 ZDHHC13 HIP14L|HIP3RP zinc finger DHHC-type containing 13 protein-coding 229886-4 chr18 1037778 1038866 + 351.373 NA Intergenic Intergenic -110329 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 265639 chr3 127329359 127330772 + 351.373 NA intron (NR_110147, intron 3 of 4) L1MA8|LINE|L1 -42019 NM_001362810 100419008 NM_001362810 PRR20G - proline rich 20G protein-coding 179991-6 chr8 130992879 130993875 + 351.373 NA intron (NM_001115, intron 1 of 17) L1ME4a|LINE|L1 47532 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 184735 chr14 42713293 42714322 + 351.373 NA Intergenic L1PA15|LINE|L1 1106951 NM_001330106 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 181133-3 chr18 13966386 13967182 + 351.373 NA Intergenic L1MB8|LINE|L1 -51077 NM_001291911 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding 192992-3 chr4 163730194 163731415 + 351.373 NA intron (NM_001166373, intron 3 of 7) intron (NM_001166373, intron 3 of 7) -117270 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding 188512-7 chrX 67054701 67055723 + 351.373 NA Intergenic Intergenic -415914 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding 190884-2 chr21 28532371 28533621 + 351.373 NA Intergenic MSTB|LTR|ERVL-MaLR -6322 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA 191850-6 chr8 135317312 135318236 + 351.373 NA Intergenic L2c|LINE|L2 83643 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 203797-2 chr10 81807813 81808787 + 351.373 NA Intergenic L1MC1|LINE|L1 -66894 NM_001010848 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 227251-3 chr16 89026190 89027463 + 351.373 NA Intergenic L1MEc|LINE|L1 -49619 NM_005187 863 Hs.513811 NM_005187 ENSG00000129993 CBFA2T3 ETO2|MTG16|MTGR2|RUNX1T3|ZMYND4 CBFA2/RUNX1 partner transcriptional co-repressor 3 protein-coding 288829 chr14 47815406 47817231 + 351.373 NA Intergenic L1PB1|LINE|L1 -21304 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 183593-6 chr2 196128847 196129887 + 351.373 NA Intergenic LTR25-int|LTR|ERV1 42211 NM_004226 9262 Hs.88297 NM_004226 ENSG00000081320 STK17B DRAK2 serine/threonine kinase 17b protein-coding 178849-10 chr9 93876148 93876955 + 351.373 NA Intergenic L1M4|LINE|L1 57194 NR_036254 100422927 NR_036254 ENSG00000265347 MIR4291 - microRNA 4291 ncRNA 213723-4 chr3 105273179 105274226 + 351.373 NA Intergenic L1MEf|LINE|L1 -93011 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 266780 chr17 76646425 76647610 + 351.373 NA Intergenic L1M4b|LINE|L1 -3260 NR_110309 55808 Hs.105352 NM_018414 ENSG00000070526 ST6GALNAC1 HSY11339|SIAT7A|ST6GalNAcI|STYI ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 protein-coding 211527-3 chr19 58166593 58167697 + 351.373 NA Intergenic Intergenic -15844 NM_016325 10782 Hs.83761 NM_016324 ENSG00000171606 ZNF274 HFB101|ZF2|ZKSCAN19|ZSCAN51 zinc finger protein 274 protein-coding 214689-3 chr19 52321291 52322470 + 351.373 NA exon (NM_001297624, exon 4 of 4) exon (NM_001297624, exon 4 of 4) -14363 NM_001161425 162963 Hs.147025 NM_173530 ENSG00000167554 ZNF610 - zinc finger protein 610 protein-coding 189917 chr2 51177808 51178578 + 351.373 NA intron (NR_135237, intron 2 of 10) L1PBa|LINE|L1 145592 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 177444-3 chr2 35694333 35695044 + 351.373 NA Intergenic L1MA3|LINE|L1 223283 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 287951-3 chr2 127612769 127614530 + 351.373 NA intron (NM_001080527, intron 25 of 46) L1MEb|LINE|L1 -32215 NM_001161415 2840 Hs.46453 NM_005291 ENSG00000144230 GPR17 - G protein-coupled receptor 17 protein-coding 177883-9 chr4 100124565 100125464 + 351.373 NA Intergenic L1MCc|LINE|L1 -65019 NR_125924 101929353 Hs.147584 NR_125924 ENSG00000249710 LOC101929353 - uncharacterized LOC101929353 ncRNA 191411-5 chr7 53976707 53977891 + 351.373 NA Intergenic L1ME1|LINE|L1 -165368 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 190620-2 chr17 53403880 53405216 + 351.373 NA Intergenic L1MEc|LINE|L1 -418379 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding 205378-7 chr2 236881323 236882434 + 351.373 NA Intergenic L1M4a1|LINE|L1 174289 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA 191586-4 chr12 4478578 4479528 + 351.373 NA Intergenic L1MEf|LINE|L1 -33439 NM_020996 2251 Hs.166015 NM_020996 ENSG00000111241 FGF6 HBGF-6|HST2 fibroblast growth factor 6 protein-coding 207135-6 chr4 63340090 63341167 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 1068822 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 182890-10 chrX 89152095 89153100 + 351.373 NA Intergenic Intergenic 405372 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding 230413-2 chr12 69303700 69305036 + 351.373 NA Intergenic L1M4b|LINE|L1 -31150 NR_031692 100302182 NR_031692 ENSG00000283476 MIR1279 MIRN1279|hsa-mir-1279 microRNA 1279 ncRNA 197121-4 chr3 84197555 84198652 + 351.373 NA Intergenic L1M2|LINE|L1 671472 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 190708-4 chr10 130853212 130854452 + 351.373 NA Intergenic L1MC4|LINE|L1 108836 NR_036180 100422867 NR_036180 ENSG00000264803 MIR378C mir-378c microRNA 378c ncRNA 222244-3 chr9 79847730 79848934 + 351.373 NA intron (NR_121213, intron 1 of 2) intron (NR_121213, intron 1 of 2) 23802 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA 218027-4 chr9 25179579 25180643 + 351.373 NA Intergenic L1M4c|LINE|L1 498747 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 184998-2 chr10 31709570 31710700 + 351.373 NA Intergenic Intergenic 198791 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 197033-5 chr6 45747712 45748652 + 351.373 NA Intergenic MLT1F2|LTR|ERVL-MaLR 189415 NR_045674 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding 281187 chr12 5861732 5863255 + 351.373 NA intron (NM_001278596, intron 3 of 25) intron (NM_001278596, intron 3 of 25) 82766 NM_001364791 57101 Hs.148970 NM_020373 ENSG00000047617 ANO2 C12orf3|TMEM16B anoctamin 2 protein-coding 197648-3 chr12 125448056 125449445 + 351.373 NA intron (NM_052907, intron 3 of 8) L1ME2|LINE|L1 122134 NM_052907 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding 269591 chr12 14580659 14582305 + 351.373 NA intron (NR_120465, intron 2 of 5) Tigger3|DNA|TcMar-Tigger -13599 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding 184383-2 chr14 40717120 40718308 + 351.373 NA Intergenic THE1B-int|LTR|ERVL-MaLR -236997 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 181045-2 chr10 63814913 63815840 + 351.373 NA Intergenic L1PREC2|LINE|L1 -293486 NM_001322258 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 188688-2 chr18 61826795 61827748 + 351.373 NA intron (NM_173557, intron 1 of 1) intron (NM_173557, intron 1 of 1) 65736 NM_173557 220441 Hs.165062 NM_173557 ENSG00000176641 RNF152 - ring finger protein 152 protein-coding 251671-2 chr5 156601966 156603319 + 351.373 NA intron (NM_001128209, intron 5 of 7) L1MA6|LINE|L1 -247653 NM_206858 153743 Hs.567727 NM_206858 ENSG00000231989 PPP1R2B PPP1R2P3 PPP1R2 family member B protein-coding 232258-4 chr5 9921477 9922624 + 351.373 NA Intergenic L1PA8|LINE|L1 -18226 NR_027112 285692 Hs.651487 NR_027112 ENSG00000249781 LINC02112 - long intergenic non-protein coding RNA 2112 ncRNA 281011-2 chr3 121114713 121115978 + 351.373 NA intron (NR_145517, intron 6 of 8) intron (NR_145517, intron 6 of 8) 65705 NR_049861 100847043 NR_049861 ENSG00000264477 MIR5682 - microRNA 5682 ncRNA 306310 chr8 122015609 122017227 + 351.373 NA Intergenic Intergenic -374978 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 177883-2 chr10 48369778 48370625 + 351.373 NA intron (NM_001323302, intron 3 of 13) intron (NM_001323302, intron 3 of 13) -31411 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding 209946-4 chr3 41129525 41130652 + 351.373 NA Intergenic L1MEi|LINE|L1 -69417 NM_001098209 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding 215128-7 chr9 38265540 38266598 + 351.373 NA Intergenic L1MA4|LINE|L1 -126633 NM_000692 219 Hs.436219 NM_000692 ENSG00000137124 ALDH1B1 ALDH5|ALDHX aldehyde dehydrogenase 1 family member B1 protein-coding 235947 chr10 18814901 18816134 + 351.373 NA Intergenic L1MC|LINE|L1 156086 NM_178815 221079 Hs.25362 NM_178815 ENSG00000165997 ARL5B ARL8 ADP ribosylation factor like GTPase 5B protein-coding 180694-7 chr2 176870471 176871185 + 351.373 NA Intergenic L1MCb|LINE|L1 233074 NR_110599 102724224 Hs.663125 NR_110599 ENSG00000224577 LINC01117 - long intergenic non-protein coding RNA 1117 ncRNA 182714 chr1 111674063 111674989 + 351.373 NA intron (NM_001370217, intron 1 of 7) L2c|LINE|L2 9732 NM_001370217 5906 Hs.190334 NM_002884 ENSG00000116473 RAP1A C21KG|G-22K|KREV-1|KREV1|RAP1|SMGP21 RAP1A, member of RAS oncogene family protein-coding 301654-3 chr5 54335074 54336526 + 351.373 NA intron (NR_126379, intron 1 of 4) L1M2|LINE|L1 14856 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA 180782 chr20 5381882 5382791 + 351.373 NA Intergenic Intergenic 63412 NR_038240 100507629 Hs.121383 NR_038239 ENSG00000226995 LINC00658 - long intergenic non-protein coding RNA 658 ncRNA 216446 chr8 129435511 129436449 + 351.373 NA intron (NR_130920, intron 1 of 3) MLT1D-int|LTR|ERVL-MaLR 48162 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA 218818-3 chr18 6514795 6515983 + 351.373 NA intron (NR_120518, intron 2 of 5) L1MB2|LINE|L1 3973 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA 260280 chr6 39672595 39673757 + 351.373 NA intron (NM_001289020, intron 3 of 21) MLT1N2|LTR|ERVL-MaLR 52232 NM_145027 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding 194837-2 chr16 61075489 61076653 + 351.373 NA Intergenic Intergenic -20305 NR_039624 100616345 NR_039624 ENSG00000283795 MIR4426 - microRNA 4426 ncRNA 180957-3 chr3 134399782 134400731 + 351.373 NA Intergenic L1M2|LINE|L1 -24839 NM_001278683 51421 Hs.426312 NM_016201 ENSG00000114019 AMOTL2 LCCP angiomotin like 2 protein-coding 190796-9 chr8 138544470 138545274 + 351.373 NA Intergenic MLT1D|LTR|ERVL-MaLR -47142 NM_001362965 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 209155-4 chr8 123563016 123563965 + 351.373 NA Intergenic Intergenic -22284 NM_001242463 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding 240515-4 chr6 62502699 62503846 + 351.373 NA Intergenic Intergenic -217045 NM_001350622 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 272139-3 chr14_GL000225v1_random 25479 26580 + 351.373 NA NA BSR/Beta|Satellite|Satellite NA NA 246576 chr16 5390866 5392229 + 351.373 NA Intergenic Intergenic 224703 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA 196945-4 chr20 19299248 19300319 + 351.373 NA intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -15187 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA 232258 chr10 43771984 43772958 + 351.373 NA Intergenic L1M8|LINE|L1 6354 NR_134484 102724264 Hs.140667 NR_134483 ENSG00000234973 LINC02658 - long intergenic non-protein coding RNA 2658 ncRNA 199492 chr16 20231415 20232496 + 351.373 NA Intergenic Intergenic 95558 NM_001007240 2813 Hs.53985 NM_001502 ENSG00000169347 GP2 ZAP75 glycoprotein 2 protein-coding 184295-4 chr18 52136726 52137616 + 351.373 NA Intergenic L1M4b|LINE|L1 -203026 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding 211527 chr11 50503395 50504398 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 94749 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 183241-5 chr17 65808297 65809357 + 351.373 NA intron (NR_126542, intron 1 of 5) MSTA|LTR|ERVL-MaLR 17624 NM_001037325 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 232170-5 chr4 71995020 71995893 + 351.373 NA Intergenic MER65-int|LTR|ERV1 -36348 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding 225318-3 chr8 138356650 138357626 + 351.373 NA intron (NM_015912, intron 2 of 19) intron (NM_015912, intron 2 of 19) 140123 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 183329-2 chr14 46101484 46102575 + 351.373 NA intron (NR_102702, intron 1 of 3) intron (NR_102702, intron 1 of 3) 37870 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 261510-2 chr3 90269101 90270163 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 1162011 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 299722 chr8 46299802 46301478 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 317003 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 184998-6 chr21 25220660 25221588 + 351.373 NA Intergenic L1M1|LINE|L1 210577 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA 187634 chr10 66225434 66226498 + 351.373 NA intron (NM_001127384, intron 13 of 17) L1MA5|LINE|L1 654541 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 223034-4 chr3 31492411 31493948 + 351.373 NA Intergenic MER5A1|DNA|hAT-Charlie -39746 NM_178862 201595 Hs.475812 NM_178862 ENSG00000163527 STT3B CDG1X|SIMP|STT3-B STT3 oligosaccharyltransferase complex catalytic subunit B protein-coding 182714-5 chr22 24926542 24927667 + 351.373 NA TTS (NM_133454) TTS (NM_133454) 19591 NM_001001663 255349 Hs.329040 NM_001001663 ENSG00000206069 TMEM211 bA9F11.1 transmembrane protein 211 protein-coding 182099-7 chr8 91528359 91529795 + 351.373 NA Intergenic Intergenic 279758 NM_134266 115111 Hs.354013 NM_052832 ENSG00000147606 SLC26A7 SUT2 solute carrier family 26 member 7 protein-coding 362881 chr3 187422400 187424279 + 351.373 NA Intergenic U13|snRNA|snRNA -23707 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA 220838 chr1 38657643 38658872 + 351.373 NA Intergenic L1ME4a|LINE|L1 183061 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA 242184-4 chr4 38644607 38645647 + 351.373 NA intron (NR_026804, intron 1 of 7) intron (NR_026804, intron 1 of 7) -19072 NM_016531 51274 Hs.298658 NM_016531 ENSG00000109787 KLF3 BKLF Kruppel like factor 3 protein-coding 234893 chr14 68101348 68102766 + 351.373 NA intron (NM_133509, intron 7 of 10) THE1C-int|LTR|ERVL-MaLR 278465 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 186052-5 chr22 25855736 25856621 + 351.373 NA intron (NM_001318245, intron 21 of 43) L1MB3|LINE|L1 113990 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 223386-5 chr5 42262307 42263557 + 351.373 NA Intergenic MSTB|LTR|ERVL-MaLR -87587 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 217324-2 chrX 75953944 75955075 + 351.373 NA Intergenic L1PB1|LINE|L1 -169255 NM_138703 139599 Hs.356869 NM_138703 ENSG00000186675 MAGEE2 HCA3 MAGE family member E2 protein-coding 206520-5 chr4 30559957 30561194 + 351.373 NA Intergenic L2c|LINE|L2 -159794 NM_032457 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 187458-2 chr14 55935312 55936271 + 351.373 NA Intergenic Intergenic -139117 NR_026797 645687 Hs.569345 NR_026796 ENSG00000258791 LINC00520 C14orf34 long intergenic non-protein coding RNA 520 ncRNA 190884-5 chr5 8803587 8804948 + 351.373 NA Intergenic L1PB1|LINE|L1 -35465 NR_109932 101929284 Hs.403715 NR_109932 LINC02199 - long intergenic non-protein coding RNA 2199 ncRNA 190357-3 chr12 46112508 46113283 + 351.373 NA Intergenic L1PB3|LINE|L1 -122321 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding 373510 chr10 37830377 37832040 + 351.373 NA non-coding (NR_147991, exon 5 of 5) non-coding (NR_147991, exon 5 of 5) 26402 NR_147999 57209 Hs.528423 NM_021045 ENSG00000198105 ZNF248 bA162G10.3 zinc finger protein 248 protein-coding 178761-3 chr17 71349057 71350037 + 351.373 NA Intergenic Intergenic -147368 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 183681 chr12 9831442 9832420 + 351.373 NA intron (NR_120305, intron 1 of 3) intron (NR_120305, intron 1 of 3) 4450 NR_120305 51348 Hs.183125 NM_016523 ENSG00000150045 KLRF1 CLEC5C|NKp80 killer cell lectin like receptor F1 protein-coding 194749 chr10 111619264 111620379 + 351.373 NA Intergenic Intergenic 505530 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 205026-5 chr3 127500322 127501318 + 351.373 NA intron (NR_125397, intron 5 of 6) MER119|DNA|hAT-Charlie 36960 NR_125397 101927149 Hs.407798 NR_125397 ENSG00000239921 LINC01471 - long intergenic non-protein coding RNA 1471 ncRNA 191411 chr10 54260812 54261649 + 351.373 NA intron (NM_001354411, intron 8 of 34) intron (NM_001354411, intron 8 of 34) -225000 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 182626-2 chr10 44127781 44128794 + 351.373 NA Intergenic Intergenic -164463 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding 253428-4 chr3 25250741 25251896 + 351.373 NA intron (NM_001290216, intron 4 of 10) L1MB8|LINE|L1 -89484 NM_001290300 5915 Hs.543218 NM_000965 ENSG00000077092 RARB HAP|MCOPS12|NR1B2|RARbeta1|RRB2 retinoic acid receptor beta protein-coding 186931-6 chr7 93103330 93104270 + 351.373 NA exon (NM_001193307, exon 2 of 2) exon (NM_001193307, exon 2 of 2) 14179 NM_017654 54809 Hs.65641 NM_017654 ENSG00000205413 SAMD9 C7orf5|DRIF1|MIRAGE|NFTC|OEF1|OEF2 sterile alpha motif domain containing 9 protein-coding 207750-3 chr7 52624297 52625464 + 351.373 NA Intergenic L1PBa|LINE|L1 -410753 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 304290 chr5 46310674 46312439 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -615176 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 294890 chr8 134029875 134031179 + 351.373 NA Intergenic Intergenic 144031 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 184120-5 chr5 41976421 41977211 + 351.373 NA Intergenic MSTB-int|LTR|ERVL-MaLR 51535 NM_012176 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding 205466-6 chr9 79552241 79553298 + 351.373 NA Intergenic Intergenic -19004 NM_001351542 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding 201425-3 chr4 75008377 75009287 + 351.373 NA intron (NM_015393, intron 1 of 3) intron (NM_015393, intron 1 of 3) -38470 NR_121617 100507388 Hs.570765 NR_121617 ENSG00000249717 LOC100507388 - uncharacterized LOC100507388 ncRNA 186843-4 chr21 45774336 45775359 + 351.373 NA intron (NM_001348243, intron 3 of 15) L1MA4A|LINE|L1 26833 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding 203357 chr1 90879366 90880358 + 351.373 NA Intergenic L1M4|LINE|L1 28103 NR_146610 105378854 Hs.606283 NR_146610 LINC01763 - long intergenic non-protein coding RNA 1763 ncRNA 217588-2 chr2 4500701 4502004 + 351.373 NA Intergenic MLT1C|LTR|ERVL-MaLR 154870 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA 196418-5 chr8 117419634 117420812 + 351.373 NA Intergenic L1PA10|LINE|L1 -100490 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 329237 chr15 67353259 67354895 + 351.373 NA intron (NM_001031715, intron 6 of 20) L1M5|LINE|L1 -98879 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding 180518-7 chr22 49224268 49225223 + 351.373 NA Intergenic L1MB2|LINE|L1 318721 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA 184383 chr10 74340369 74341125 + 351.373 NA intron (NM_001369124, intron 4 of 9) intron (NM_001369124, intron 4 of 9) 163984 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding 191235-2 chr12 96343898 96344768 + 351.373 NA intron (NM_002595, intron 1 of 16) L1MB4|LINE|L1 56106 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding 201688-9 chr8 136783198 136784210 + 351.373 NA intron (NR_147196, intron 2 of 5) MSTA|LTR|ERVL-MaLR 252906 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 197472-3 chr11 57184507 57185661 + 351.373 NA intron (NM_001005210, intron 1 of 1) intron (NM_001005210, intron 1 of 1) 3131 NM_001005210 219527 Hs.199853 NM_001005210 ENSG00000183908 LRRC55 - leucine rich repeat containing 55 protein-coding 220575 chr20 43032916 43034087 + 351.373 NA intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) 64758 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA 211263 chr10 27424333 27425371 + 351.373 NA Intergenic ERVL-B4-int|LTR|ERVL -10484 NM_001034842 374308 Hs.631832 NM_001034842 ENSG00000182077 PTCHD3 PTR patched domain containing 3 protein-coding 206783 chr11 108439059 108440169 + 351.373 NA intron (NR_147053, intron 3 of 12) L1MB4|LINE|L1 27915 NM_001330368 160140 Hs.653180 NM_152587 ENSG00000166323 C11orf65 - chromosome 11 open reading frame 65 protein-coding 179464-6 chr3 180777531 180778542 + 351.373 NA intron (NR_109986, intron 4 of 13) L1PA15|LINE|L1 92142 NR_109986 101928882 Hs.734668 NR_109986 ENSG00000285336 LOC101928882 - uncharacterized LOC101928882 ncRNA 211527-5 chr4 60981538 60982703 + 351.373 NA Intergenic L1M4b|LINE|L1 59501 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 201513 chr2 15019243 15020565 + 351.373 NA Intergenic MLT1A0|LTR|ERVL-MaLR 387187 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding 202743 chr19 27688289 27689350 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -104612 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 221453-2 chr3 176265240 176266353 + 351.373 NA Intergenic L1MA6|LINE|L1 21245 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA 285315-2 chr17 61700270 61701556 + 351.373 NA intron (NM_032043, intron 17 of 19) L1MB7|LINE|L1 -109694 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 208628 chr1 180576029 180577020 + 351.373 NA Intergenic LTR26B|LTR|ERV1 17550 NR_125716 148756 NR_125716 ENSG00000236719 OVAAL LINC01131|OVAL ovarian adenocarcinoma amplified long non-coding RNA ncRNA 186755 chr16 8347366 8348302 + 351.373 NA Intergenic Intergenic 242004 NM_001290098 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 188248 chr14 46416900 46417780 + 351.373 NA intron (NR_102702, intron 3 of 3) L1MB1|LINE|L1 -54019 NR_102699 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 196506-3 chr7 26339894 26340888 + 351.373 NA intron (NM_001318199, intron 1 of 6) MER58A|DNA|hAT-Charlie -20493 NM_001199837 29887 Hs.741316 NM_013322 ENSG00000086300 SNX10 OPTB8 sorting nexin 10 protein-coding 221629-2 chr9 83171989 83173336 + 351.373 NA Intergenic L1MA4|LINE|L1 94606 NM_001244962 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding 232434 chr1 5204196 5205423 + 351.373 NA Intergenic MLT1L|LTR|ERVL-MaLR 550200 NM_001042478 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding 202040-5 chr20 16218572 16219700 + 351.373 NA Intergenic Intergenic -233254 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA 214162 chr1 107632395 107633503 + 351.373 NA intron (NM_006113, intron 20 of 26) intron (NM_006113, intron 20 of 26) 55550 NM_001079874 10451 Hs.267659 NM_006113 ENSG00000134215 VAV3 - vav guanine nucleotide exchange factor 3 protein-coding 191850-5 chr8 129080591 129081556 + 351.373 NA Intergenic Intergenic -115072 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA 198263 chr10 42315986 42317047 + 351.373 NA Intergenic Intergenic 51529 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 276267 chr8 88833520 88835095 + 351.373 NA Intergenic L1MB7|LINE|L1 -506824 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 231994-3 chr7 53889503 53891005 + 351.373 NA Intergenic Intergenic -78323 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 184295-7 chr6 103295719 103297012 + 351.373 NA Intergenic Intergenic 1563181 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding 194573-3 chr3 83832896 83833990 + 351.373 NA Intergenic L1M3b|LINE|L1 1036132 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 194924 chr4 124813308 124814317 + 351.373 NA Intergenic Intergenic -101080 NM_020337 57182 Hs.480694 NM_020337 ENSG00000151458 ANKRD50 - ankyrin repeat domain 50 protein-coding 478132 chr8 135319397 135321552 + 351.373 NA Intergenic Intergenic 86343 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 227866 chr7 5061265 5062436 + 351.373 NA intron (NM_001204513, intron 4 of 5) AluSx|SINE|Alu -10210 NR_015343 389458 Hs.733005 NM_203393 ENSG00000273313 RBAKDN - RBAK downstream neighbor ncRNA 198790 chr5 178713416 178714426 + 351.373 NA intron (NM_005649, intron 4 of 4) intron (NM_005649, intron 4 of 4) 16738 NM_005649 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding 178322-2 chr10 41899745 41900585 + 351.373 NA Intergenic (AATGG)n|Simple_repeat|Simple_repeat 467880 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 195276-5 chr7 51913769 51914740 + 351.373 NA Intergenic L2a|LINE|L2 -520998 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA 269679 chr10 69548307 69549653 + 351.373 NA Intergenic L1ME4a|LINE|L1 24442 NM_020999 50674 Hs.532682 NM_020999 ENSG00000122859 NEUROG3 Atoh5|Math4B|NGN-3|bHLHa7|ngn3 neurogenin 3 protein-coding 325108-2 chr9 31625812 31627476 + 351.373 NA Intergenic L1M4|LINE|L1 -245154 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 377024 chr5 3399746 3401921 + 351.373 NA Intergenic Intergenic -51983 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA 188863-4 chr2 145510555 145511808 + 351.373 NA Intergenic (AATAA)n|Simple_repeat|Simple_repeat 843214 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA 198965-5 chr8 79179911 79180696 + 351.373 NA Intergenic THE1B-int|LTR|ERVL-MaLR -151885 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 180782-3 chr5 96267528 96268496 + 351.373 NA intron (NR_130776, intron 1 of 4) L1MA4|LINE|L1 164147 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding 250529 chr4 42800104 42801757 + 351.373 NA Intergenic Intergenic -92336 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 181836-2 chr19 27577224 27578218 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -215710 NR_110691 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 195012-6 chr3 133729829 133730665 + 351.373 NA intron (NM_001354703, intron 7 of 22) intron (NM_001354703, intron 7 of 22) -16146 NM_001063 7018 Hs.518267 NM_001063 ENSG00000091513 TF HEL-S-71p|PRO1557|PRO2086|TFQTL1 transferrin protein-coding 266517 chr5 122255704 122257064 + 351.373 NA Intergenic L1PB3|LINE|L1 -55307 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding 207574-5 chr7 17228119 17229182 + 351.373 NA Intergenic Intergenic -70002 NM_001621 196 Hs.171189 NM_001621 ENSG00000106546 AHR RP85|bHLHe76 aryl hydrocarbon receptor protein-coding 230852-2 chr7 52676179 52677328 + 351.373 NA Intergenic MLT1A0|LTR|ERVL-MaLR -358880 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 184120-4 chr3 103185991 103187094 + 351.373 NA Intergenic MLT1A1|LTR|ERVL-MaLR 337574 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 222332 chr14 30171141 30172222 + 351.373 NA Intergenic HAL1|LINE|L1 -243834 NM_002742 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding 207398-6 chr8 133783313 133784408 + 351.373 NA Intergenic L1PB1|LINE|L1 -6508 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA 181221-3 chr19 29433338 29434283 + 351.373 NA intron (NR_040029, intron 1 of 9) intron (NR_040029, intron 1 of 9) 91942 NR_040029 284395 Hs.631601 NR_040029 ENSG00000264515 LOC284395 - uncharacterized LOC284395 ncRNA 199317-9 chr8 134419949 134420811 + 351.373 NA Intergenic ERVL-E-int|LTR|ERVL -177691 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 238495 chr1 95756824 95758508 + 351.373 NA Intergenic MER63C|DNA|hAT-Blackjack -234402 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA 236387-3 chr5 45982932 45984239 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -287205 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 230062-4 chr10 109187300 109188494 + 351.373 NA Intergenic L1MA5A|LINE|L1 735349 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 189303 chr2 35515886 35516839 + 351.373 NA Intergenic L1ME4a|LINE|L1 44957 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 189215-2 chr13 94281173 94282207 + 351.373 NA intron (NM_005708, intron 4 of 8) intron (NM_005708, intron 4 of 8) -93699 NR_046535 100873972 Hs.670344 NR_046535 ENSG00000236520 GPC6-AS1 - GPC6 antisense RNA 1 ncRNA 203709 chr14 30346574 30347797 + 351.373 NA Intergenic MIR|SINE|MIR -211938 NM_001308097 55632 Hs.509008 NM_017769 ENSG00000092140 G2E3 KIAA1333|PHF7B G2/M-phase specific E3 ubiquitin protein ligase protein-coding 182187-5 chr18 32184299 32185123 + 351.373 NA Intergenic L1MC1|LINE|L1 -5328 NM_005925 4225 Hs.194777 NM_005925 ENSG00000141434 MEP1B - meprin A subunit beta protein-coding 275477 chr6 140129624 140131102 + 351.373 NA Intergenic L1M2|LINE|L1 -74889 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA 194134-5 chr7 48063851 48064934 + 351.373 NA Intergenic L1MC4|LINE|L1 -24211 NM_001362774 7378 Hs.488240 NM_003364 ENSG00000183696 UPP1 UDRPASE|UP|UPASE|UPP uridine phosphorylase 1 protein-coding 187370-8 chr5 162719122 162720235 + 351.373 NA Intergenic Intergenic 652036 NM_198904 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 180167-10 chr5 5962650 5963605 + 351.373 NA Intergenic Kanga2_a|DNA|TcMar-Tc2 374165 NR_028351 401172 Hs.376760 NM_001001702 ENSG00000250490 LINC02145 - long intergenic non-protein coding RNA 2145 ncRNA 182539-4 chr7 17428023 17429263 + 351.373 NA intron (NR_110015, intron 1 of 2) AluJb|SINE|Alu 53726 NR_110015 102659288 Hs.559488 NR_110014 KCCAT333 - renal clear cell carcinoma-associated transcript 333 ncRNA 190269-3 chr15 98475937 98476764 + 351.373 NA intron (NM_182562, intron 4 of 6) L1M4a1|LINE|L1 37986 NM_182562 283777 Hs.668070 NM_182562 ENSG00000283597 FAM169B - family with sequence similarity 169 member B protein-coding 206783-3 chr14 49207770 49208673 + 351.373 NA Intergenic Intergenic 378159 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 202918 chr1 189125721 189126708 + 351.373 NA Intergenic L1MA4A|LINE|L1 1349796 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 244292-3 chr5 178886629 178887846 + 351.373 NA Intergenic L2c|LINE|L2 -8676 NM_030613 80108 Hs.654533 NM_030613 ENSG00000198939 ZFP2 ZNF751|zfp-2 ZFP2 zinc finger protein protein-coding 227163-3 chr18 5202780 5204048 + 351.373 NA Intergenic L1ME2|LINE|L1 -5662 NM_001330553 642597 Hs.437160 NM_001145194 ENSG00000231824 AKAIN1 C18orf42 A-kinase anchor inhibitor 1 protein-coding 203533-4 chr7 32107085 32108154 + 351.373 NA intron (NM_001322059, intron 3 of 17) L1MCa|LINE|L1 -36183 NM_001322056 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 184559 chr10 8787129 8787861 + 351.373 NA Intergenic L1MEd|LINE|L1 -110494 NR_131944 105755953 Hs.564146 NR_131944 ENSG00000234752 LINC02676 - long intergenic non-protein coding RNA 2676 ncRNA 178146-12 chr6 134780175 134781326 + 351.373 NA Intergenic Intergenic 169351 NM_170771 64577 Hs.486520 NM_022568 ENSG00000118514 ALDH8A1 ALDH12|DJ352A20.2 aldehyde dehydrogenase 8 family member A1 protein-coding 313337 chr2 99126930 99128181 + 351.373 NA intron (NM_001349013, intron 1 of 16) intron (NM_001349013, intron 1 of 16) 13625 NR_146001 80705 Hs.120267 NM_025244 ENSG00000135951 TSGA10 CEP4L|CT79|SPGF26 testis specific 10 protein-coding 178410-3 chr11 113653276 113654466 + 351.373 NA Intergenic THE1D|LTR|ERVL-MaLR 52437 NM_001288749 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding 183241-8 chr7 110822409 110823610 + 351.373 NA intron (NM_001350963, intron 5 of 5) intron (NM_001350963, intron 5 of 5) -267997 NM_001099660 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding 215304-5 chr8 132590410 132591635 + 351.373 NA intron (NR_135913, intron 9 of 10) L1M5|LINE|L1 -29543 NR_026684 93668 Hs.545218 NR_026684 ENSG00000253521 HPYR1 HPRG1|LINC00027|NCRNA00027 Helicobacter pylori responsive 1 ncRNA 234454-3 chr2 118258804 118259813 + 351.373 NA Intergenic L1ME1|LINE|L1 -72922 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA 193695-3 chr10 109334718 109335991 + 351.373 NA Intergenic L1MEf|LINE|L1 587892 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 177707-5 chr20 2367693 2368444 + 351.373 NA Intergenic HAL1|LINE|L1 -12833 NM_198994 343641 Hs.452039 NM_198994 ENSG00000166948 TGM6 SCA35|TG6|TGM3L|TGY|dJ734P14.3 transglutaminase 6 protein-coding 195979-2 chr12 37955738 37956994 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -360408 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 195539 chr12 110571288 110572239 + 351.373 NA intron (NR_138550, intron 1 of 4) intron (NR_138550, intron 1 of 4) 11555 NR_138550 160760 Hs.13854 NM_139283 ENSG00000196850 PPTC7 TA-PP2C|TAPP2C PTC7 protein phosphatase homolog protein-coding 184998-7 chr5 41959891 41960909 + 351.373 NA Intergenic L1MA8|LINE|L1 35119 NM_012176 26272 Hs.165575 NM_012176 ENSG00000151876 FBXO4 FBX4 F-box protein 4 protein-coding 230589-3 chr20 6291914 6293028 + 351.373 NA Intergenic MLT1H1|LTR|ERVL-MaLR -134261 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA 196945 chr1 210279086 210280025 + 351.373 NA Intergenic LTR59|LTR|ERV1 -45670 NR_024337 574036 Hs.446946 NR_024337 ENSG00000203706 SERTAD4-AS1 C1orf133 SERTAD4 antisense RNA 1 ncRNA 191147-6 chr5 151838781 151839949 + 351.373 NA intron (NM_000171, intron 7 of 8) L1MB7|LINE|L1 -67189 NR_132345 100652758 Hs.587054 NM_001278082 LOC100652758 - uncharacterized LOC100652758 ncRNA 184471-7 chr5 110951486 110952263 + 351.373 NA Intergenic A-rich|Low_complexity|Low_complexity -118206 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding 188863-6 chr3 33333281 33334263 + 351.373 NA intron (NR_146129, intron 4 of 15) intron (NR_146129, intron 4 of 15) 56330 NM_001349325 25827 Hs.475872 NM_012157 ENSG00000153558 FBXL2 FBL2|FBL3 F-box and leucine rich repeat protein 2 protein-coding 181221-2 chr16 49234424 49235412 + 351.373 NA Intergenic MLT1A0|LTR|ERVL-MaLR 46920 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding 205026-4 chr2 78329691 78330601 + 351.373 NA Intergenic MLT2B1|LTR|ERVL -39415 NR_110288 101927967 Hs.406952 NR_110288 LOC101927967 - uncharacterized LOC101927967 ncRNA 193958-10 chr8 81393663 81394563 + 351.373 NA Intergenic Intergenic 53326 NM_001348381 5375 Hs.571512 NM_002677 ENSG00000147588 PMP2 CMT1G|FABP8|M-FABP|MP2|P2 peripheral myelin protein 2 protein-coding 233663 chr1 34484522 34485488 + 351.373 NA Intergenic Intergenic 184689 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 177883-7 chr3 51828084 51829078 + 351.373 NA intron (NM_001207023, intron 2 of 6) L1PREC2|LINE|L1 1698 NM_001085479 401067 Hs.729443 NM_001085479 ENSG00000229972 IQCF3 - IQ motif containing F3 protein-coding 204851-6 chr4 79789958 79791039 + 351.373 NA Intergenic L1MA5|LINE|L1 -36973 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA 179991-2 chr10 114294961 114295990 + 351.373 NA TTS (NM_001320804) TTS (NM_001320804) 55861 NM_001320804 340706 Hs.197741 NM_198496 ENSG00000165816 VWA2 AMACO|CCSP-2|CCSP2|NET42 von Willebrand factor A domain containing 2 protein-coding 192026-5 chr21 20312719 20313721 + 351.373 NA Intergenic L1MEf|LINE|L1 -54535 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA 303675 chr2 126903648 126905445 + 351.373 NA Intergenic Intergenic 5656 NR_136239 101929926 Hs.98984 NM_001322244 ENSG00000237524 TEX51 - testis expressed 51 protein-coding 211790-8 chr8 135298248 135299348 + 351.373 NA intron (NR_120396, intron 4 of 4) L1ME2|LINE|L1 64667 NR_120395 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 191059-8 chrX 66829985 66830728 + 351.373 NA Intergenic L1M1|LINE|L1 -191058 NM_001199687 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding 197384-6 chr19 14718777 14719800 + 351.373 NA exon (NM_032433, exon 12 of 12) exon (NM_032433, exon 12 of 12) 29240 NM_001352241 84449 Hs.515215 NM_032433 ENSG00000160961 ZNF333 - zinc finger protein 333 protein-coding 211439-4 chr8 118569124 118570253 + 351.373 NA intron (NM_001101676, intron 2 of 4) MLT1A|LTR|ERVL-MaLR -51313 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 203533 chr11 50393661 50394641 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -14996 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 205817-2 chr12 44477279 44478537 + 351.373 NA Intergenic HUERS-P3-int|LTR|ERV1 397753 NM_001145109 4753 Hs.505326 NM_006159 ENSG00000184613 NELL2 NRP2 neural EGFL like 2 protein-coding 208892-2 chr8 84306750 84307853 + 351.373 NA intron (NM_001354320, intron 2 of 9) intron (NM_001354320, intron 2 of 9) -108183 NM_001354308 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 178322 chr1 227580524 227581202 + 351.373 NA intron (NM_001367909, intron 1 of 3) AluSp|SINE|Alu 17307 NM_001367910 339500 Hs.30323 NM_032755 ENSG00000181450 ZNF678 - zinc finger protein 678 protein-coding 250705-2 chr7 41666729 41667738 + 351.373 NA Intergenic Intergenic -26686 NR_027119 285954 Hs.656869 NR_027118 ENSG00000224116 INHBA-AS1 - INHBA antisense RNA 1 ncRNA 198350 chr1 55410938 55412087 + 351.373 NA Intergenic ERVL-E-int|LTR|ERVL 185871 NR_039618 100616272 NR_039618 ENSG00000265822 MIR4422 mir-4422 microRNA 4422 ncRNA 210297 chr8 143163967 143164996 + 351.373 NA Intergenic MER49|LTR|ERV1 -3827 NM_001130478 4062 Hs.159590 NM_002347 ENSG00000176956 LY6H NMLY6 lymphocyte antigen 6 family member H protein-coding 193343-4 chr5 119857621 119858402 + 351.373 NA Intergenic L1MA8|LINE|L1 228452 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding 188688-3 chr22 48162625 48163714 + 351.373 NA Intergenic AluY|SINE|Alu -111195 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 237880-3 chr6 61499846 61501041 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -73687 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 197296 chr1 95471878 95473227 + 351.373 NA Intergenic Intergenic -2185 NR_033966 440594 Hs.514123 NR_033966 ENSG00000233907 LINC01761 - long intergenic non-protein coding RNA 1761 ncRNA 219257 chr1 112274004 112275180 + 351.373 NA Intergenic ERVL-E-int|LTR|ERVL -121622 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding 210824 chr10 75446141 75447318 + 351.373 NA intron (NM_001305581, intron 2 of 6) intron (NM_001305581, intron 2 of 6) 15105 NM_001305581 83938 Hs.118161 NM_032024 ENSG00000148655 LRMDA C10orf11|CDA017 leucine rich melanocyte differentiation associated protein-coding 188424-5 chr2 123837957 123838882 + 351.373 NA Intergenic L1MA4A|LINE|L1 186755 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 196945-5 chr3 42279324 42280282 + 351.373 NA Intergenic THE1D-int|LTR|ERVL-MaLR -13618 NM_000729 885 Hs.458426 NM_000729 ENSG00000187094 CCK - cholecystokinin protein-coding 183153-12 chr8 79034267 79035253 + 351.373 NA Intergenic L1PA11|LINE|L1 197231 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA 262213 chr12 34582720 34584235 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 560981 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 180342-6 chr8 141880023 141880899 + 351.373 NA Intergenic Intergenic -94148 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 192289-6 chr4 107477241 107478423 + 351.373 NA Intergenic AluYa5|SINE|Alu 242402 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding 206608-4 chr8 138208134 138209061 + 351.373 NA intron (NM_015912, intron 7 of 19) intron (NM_015912, intron 7 of 19) -125052 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 188512 chr10 10638316 10639391 + 351.373 NA intron (NM_001326317, intron 1 of 14) intron (NM_001326317, intron 1 of 14) 156061 NR_027082 207107 Hs.31562 NR_027082 ENSG00000225383 SFTA1P SFTPF surfactant associated 1, pseudogene pseudo 239813 chr22 43637649 43638914 + 351.373 NA intron (NM_198856, intron 15 of 29) intron (NM_198856, intron 15 of 29) 122027 NR_046563 100874197 Hs.627997 NR_046563 EFCAB6-AS1 - EFCAB6 antisense RNA 1 ncRNA 180694 chr1 115390436 115391188 + 351.373 NA Intergenic ERVL-int|LTR|ERVL -52576 NM_002506 4803 Hs.2561 NM_002506 ENSG00000134259 NGF Beta-NGF|HSAN5|NGFB nerve growth factor protein-coding 205378-5 chr16 3570713 3572004 + 351.373 NA intron (NR_075083, intron 1 of 20) AluJo|SINE|Alu 6045 NM_178844 197358 Hs.592091 NM_178844 ENSG00000167984 NLRC3 CLR16.2|NOD3 NLR family CARD domain containing 3 protein-coding 202830-2 chr1 169634820 169635765 + 351.373 NA Intergenic L1MA8|LINE|L1 -5168 NM_003005 6403 Hs.73800 NM_003005 ENSG00000174175 SELP CD62|CD62P|GMP140|GRMP|LECAM3|PADGEM|PSEL selectin P protein-coding 241218-4 chr4 43472981 43474681 + 351.373 NA intron (NR_146993, intron 1 of 2) L1M1|LINE|L1 18712 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 183417-4 chr16 83125034 83125816 + 351.373 NA exon (NM_001257, exon 4 of 14) exon (NM_001257, exon 4 of 14) -135127 NR_110937 101928417 Hs.569538 NR_110937 ENSG00000260832 LOC101928417 - uncharacterized LOC101928417 ncRNA 203445-3 chr8 83741309 83742521 + 351.373 NA Intergenic Intergenic 338157 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 189039-5 chr5 79730498 79731690 + 351.373 NA exon (NM_153610, exon 2 of 13) exon (NM_153610, exon 2 of 13) 41258 NM_153610 202333 Hs.482625 NM_153610 ENSG00000164309 CMYA5 C5orf10|SPRYD2|TRIM76 cardiomyopathy associated 5 protein-coding 212054-3 chr2 102577051 102578479 + 351.373 NA Intergenic L1M3de|LINE|L1 -41788 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding 195539-3 chr16 56015492 56016359 + 351.373 NA Intergenic Intergenic -59894 NM_001190158 221223 Hs.350800 NM_145024 ENSG00000159398 CES5A CAUXIN|CES4C1|CES5|CES7|HEL126 carboxylesterase 5A protein-coding 228129-3 chr7 49564694 49565782 + 351.373 NA Intergenic L1PA16|LINE|L1 -208400 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding 207662-3 chr2 50803110 50804442 + 351.373 NA intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -107514 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA 179376 chr1 178978739 178979506 + 351.373 NA Intergenic L1MA4|LINE|L1 -46682 NM_001324310 9917 Hs.5737 NM_014864 ENSG00000116199 FAM20B gxk1 FAM20B glycosaminoglycan xylosylkinase protein-coding 189566 chr11 24103657 24104639 + 351.373 NA Intergenic L1PB4|LINE|L1 -392905 NM_001009909 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding 199492-3 chr4 31586259 31587512 + 351.373 NA Intergenic Intergenic 80341 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA 189654-2 chr7 68762371 68763339 + 351.373 NA Intergenic MER68|LTR|ERVL 742602 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA 259489-2 chr12 48885378 48887124 + 351.373 NA Intergenic L2c|LINE|L2 -17882 NM_033124 85478 Hs.512805 NM_033124 ENSG00000139537 CCDC65 CFAP250|DRC2|FAP250|NYD-SP28 coiled-coil domain containing 65 protein-coding 187809-11 chr4 123981749 123982592 + 351.373 NA Intergenic L1ME5|LINE|L1 207906 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA 220399 chr10 7448366 7449384 + 351.373 NA Intergenic L1M4a1|LINE|L1 -37389 NM_001029880 57713 Hs.407983 NM_001018039 ENSG00000198879 SFMBT2 - Scm like with four mbt domains 2 protein-coding 316675-2 chr17 79551958 79553686 + 351.373 NA intron (NM_001350451, intron 1 of 14) L1M5|LINE|L1 -36674 NM_001082575 146713 Hs.135229 NM_001025448 ENSG00000167281 RBFOX3 FOX-3|FOX3|HRNBP3|NEUN RNA binding fox-1 homolog 3 protein-coding 195451 chr19 29555262 29556209 + 351.373 NA intron (NM_001146339, intron 4 of 4) L1PA10|LINE|L1 29151 NM_001146339 342865 Hs.451618 NM_001146339 ENSG00000187135 VSTM2B - V-set and transmembrane domain containing 2B protein-coding 194310-4 chr3 73133376 73134464 + 351.373 NA Intergenic L1MD1|LINE|L1 72261 NM_018029 55096 Hs.658858 NM_018029 ENSG00000255423 EBLN2 EBLN-2 endogenous Bornavirus like nucleoprotein 2 protein-coding 206784 chr9 102549290 102550662 + 351.373 NA intron (NR_103830, intron 1 of 4) intron (NR_103830, intron 1 of 4) 30339 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA 199931 chr16 63631500 63632364 + 351.373 NA Intergenic L1MD1|LINE|L1 1490131 NM_001797 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding 353306 chr6 56976752 56978347 + 351.373 NA intron (NM_001318539, intron 1 of 3) Cheshire|DNA|hAT-Charlie 22442 NM_152731 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding 185789-5 chr4 43551464 43552515 + 351.373 NA Intergenic L1MA1|LINE|L1 -59446 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 230150-4 chr5 41079465 41080819 + 351.373 NA Intergenic Intergenic -8800 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding 182539-3 chr6 28189631 28190537 + 351.373 NA Intergenic Intergenic 28323 NR_103448 651302 Hs.172143 NM_001145129 ENSG00000226314 ZNF192P1 ZNF389|ZNF389P|dJ265C24.4 zinc finger protein 192 pseudogene 1 pseudo 180518-9 chr8 79582996 79583968 + 351.373 NA Intergenic THE1D-int|LTR|ERVL-MaLR -27635 NM_001199214 11075 Hs.521651 NM_007029 ENSG00000104435 STMN2 SCG10|SCGN10 stathmin 2 protein-coding 183856-2 chr19 36821861 36822507 + 351.373 NA intron (NM_206894, intron 4 of 4) intron (NM_206894, intron 4 of 4) 15843 NM_001242802 388536 Hs.282067 NM_206894 ENSG00000197863 ZNF790 - zinc finger protein 790 protein-coding 222244 chr1 161989598 161990752 + 351.373 NA intron (NM_001347700, intron 6 of 7) MER45B|DNA|hAT-Tip100 34290 NM_001297713 25903 Hs.507515 NM_015441 ENSG00000162745 OLFML2B - olfactomedin like 2B protein-coding 199404-3 chr6 102193921 102194989 + 351.373 NA Intergenic Intergenic 795470 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 202479 chr10 116034006 116034756 + 351.373 NA Intergenic L1M4b|LINE|L1 160408 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA 191674-4 chr8 123724272 123725257 + 351.373 NA intron (NM_004306, intron 1 of 10) MER113|DNA|hAT-Charlie 12629 NM_004306 312 Hs.181107 NM_004306 ENSG00000104537 ANXA13 ANX13|ISA annexin A13 protein-coding 183153-8 chr5 155791308 155792415 + 351.373 NA Intergenic L1PA16|LINE|L1 -534896 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding 177795-4 chr20 11020288 11021353 + 351.373 NA Intergenic L1PB3|LINE|L1 -5724 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA 268098-3 chr9 96696567 96697911 + 351.373 NA Intergenic L1MD2|LINE|L1 -28582 NR_026792 441455 Hs.229613 NR_026792 LOC441455 - makorin ring finger protein 1 pseudogene pseudo 237616-3 chr7 64702409 64703746 + 351.373 NA intron (NM_016220, intron 6 of 6) L1MB2|LINE|L1 24013 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 247630 chr14 63717918 63718973 + 351.373 NA intron (NM_030791, intron 1 of 2).2 L1MEc|LINE|L1 9620 NM_030791 81537 Hs.24678 NM_030791 ENSG00000126821 SGPP1 SPP-1|SPPase1 sphingosine-1-phosphate phosphatase 1 protein-coding 178146-8 chr20 41983955 41984841 + 351.373 NA Intergenic L3|LINE|CR1 -366021 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 191147 chr12 37946670 37947816 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -369531 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 184822-3 chr10 39299320 39300306 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 603217 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 275653 chr11 92796697 92798495 + 351.373 NA intron (NM_001008781, intron 8 of 24) intron (NM_001008781, intron 8 of 24) 118032 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA 216095-4 chr22 36173778 36174758 + 351.373 NA Intergenic Intergenic -8091 NM_145642 80833 Hs.474737 NM_014349 ENSG00000128284 APOL3 APOLIII|CG121|CG12_1|apoL-III apolipoprotein L3 protein-coding 214074-3 chr16 73438427 73439585 + 351.373 NA Intergenic Intergenic 52201 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 184910-5 chr20 22139165 22139876 + 351.373 NA Intergenic L1MB3|LINE|L1 85430 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA 286457 chr8 138280567 138282053 + 351.373 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) -197765 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 216885-4 chr5 56419446 56420631 + 351.373 NA Intergenic L2a|LINE|L2 61731 NR_104664 102467147 Hs.650177 NR_104664 ENSG00000248727 LINC01948 - long intergenic non-protein coding RNA 1948 ncRNA 181572-5 chr21 27515922 27516683 + 351.373 NA Intergenic Intergenic -206077 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 216095 chr10 25663117 25664286 + 351.373 NA intron (NR_108067, intron 2 of 4) L1ME1|LINE|L1 11989 NR_108069 101929052 Hs.128298 NR_108067 ENSG00000280809 LINC00836 - long intergenic non-protein coding RNA 836 ncRNA 249124-3 chr9 96792920 96793991 + 351.373 NA Intergenic L1PREC2|LINE|L1 -15326 NM_014930 22869 Hs.75264 NM_014930 ENSG00000081386 ZNF510 - zinc finger protein 510 protein-coding 270294-2 chr12 37849528 37851047 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -466487 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 192201 chr10 78608981 78610143 + 351.373 NA Intergenic L1MD2|LINE|L1 342220 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 182363-2 chr17 26834133 26835325 + 351.373 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat 254512 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 197208-4 chr7 37169399 37170759 + 351.373 NA intron (NM_001206480, intron 13 of 21) AluSq2|SINE|Alu 172283 NR_104120 100861514 Hs.627775 NR_104120 ENSG00000224101 ELMO1-AS1 - ELMO1 antisense RNA 1 ncRNA 294363 chr5 30462171 30463608 + 351.373 NA Intergenic Intergenic 582329 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 199580-5 chr4 52251367 52252415 + 351.373 NA Intergenic LOR1a|LTR|ERV1 200587 NM_145263 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding 180430-5 chr2 63633616 63634308 + 351.373 NA Intergenic AluSz|SINE|Alu 44811 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding 184120-2 chr16 60145973 60146873 + 351.373 NA Intergenic Intergenic 213370 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding 179991-4 chr16 76761966 76763011 + 351.373 NA Intergenic MSTB-int|LTR|ERVL-MaLR -106448 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA 194837-4 chr7 56532125 56533539 + 351.373 NA Intergenic L1MB3|LINE|L1 5298 NR_108099 101928401 Hs.385614 NR_108099 ENSG00000233288 LOC101928401 - uncharacterized LOC101928401 ncRNA 180694-5 chr18 1061171 1062221 + 351.373 NA Intergenic L1MA9|LINE|L1 -133703 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 177356-7 chr6 38001605 38002702 + 351.373 NA intron (NM_021943, intron 2 of 5) intron (NM_021943, intron 2 of 5) 182426 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding 281011 chr10 83752426 83754065 + 351.373 NA Intergenic THE1D-int|LTR|ERVL-MaLR -76156 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 257820 chr3 60971921 60972976 + 351.373 NA intron (NR_148922, intron 3 of 3) L1MEg|LINE|L1 279004 NM_002012 2272 Hs.655995 NM_002012 ENSG00000189283 FHIT AP3Aase|FRA3B fragile histidine triad diadenosine triphosphatase protein-coding 242975-2 chr20 42071377 42072662 + 351.373 NA TTS (NM_007050) TTS (NM_007050) -453642 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 182890-9 chr8 127156664 127157433 + 351.373 NA Intergenic L1PB1|LINE|L1 40579 NR_120364 103021165 Hs.573407 NR_120364 CASC19 CARLO6|CARLo-6|LINC01245 cancer susceptibility 19 ncRNA 190444-4 chr6 151156297 151157239 + 351.373 NA Intergenic AluJb|SINE|Alu 54093 NR_162145 113219461 NR_162145 MIR12131 - microRNA 12131 ncRNA 274071 chr16 62800802 62802405 + 351.373 NA Intergenic Intergenic -765165 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 188161-2 chr5 126259491 126260535 + 351.373 NA Intergenic L1M2|LINE|L1 25162 NR_105040 101927488 Hs.432319 NR_105039 LOC101927488 - uncharacterized LOC101927488 ncRNA 184295-2 chr12 89681814 89682894 + 351.373 NA intron (NM_001366520, intron 1 of 21) L1MC4a|LINE|L1 26484 NM_001366522 490 Hs.506276 NM_001682 ENSG00000070961 ATP2B1 PMCA1|PMCA1kb ATPase plasma membrane Ca2+ transporting 1 protein-coding 187721-6 chr2 128854107 128855215 + 351.373 NA Intergenic AluYa5|SINE|Alu -9939 NR_110278 101927881 Hs.570247 NR_110278 LOC101927881 - uncharacterized LOC101927881 ncRNA 189566-5 chr5 114968568 114970020 + 351.373 NA Intergenic L1MC4a|LINE|L1 -195881 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA 243414 chr3 43123658 43124990 + 351.373 NA Intergenic L1MEg|LINE|L1 -18245 NM_032806 84892 Hs.745002 NM_032806 ENSG00000144647 POMGNT2 AGO61|C3orf39|GTDC2|MDDGA8|MDDGC8 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) protein-coding 190884-4 chr4 33369691 33370737 + 351.373 NA Intergenic Intergenic 669679 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 188863-5 chr22 47984725 47985736 + 351.373 NA Intergenic L1MB7|LINE|L1 -289134 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 177531-5 chr3 44664601 44665573 + 351.373 NA intron (NR_157564, intron 1 of 2) HAL1|LINE|L1 16355 NM_003420 7584 Hs.288658 NM_003420 ENSG00000169981 ZNF35 HF.10|HF10|Zfp105 zinc finger protein 35 protein-coding 259489 chr11 54955634 54957274 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 249622 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 229710 chr1 189987960 189989131 + 351.373 NA Intergenic Intergenic 487465 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 226109-2 chr11 20898760 20900043 + 351.373 NA intron (NM_201551, intron 5 of 18) L1ME3C|LINE|L1 229815 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding 225494-3 chr2 75991067 75992101 + 351.373 NA Intergenic L1M2|LINE|L1 -280669 NM_001201335 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 184822-6 chr4 174095744 174096528 + 351.373 NA intron (NR_125896, intron 4 of 4) L1MA5A|LINE|L1 124262 NR_125896 101928509 Hs.147719 NR_125896 ENSG00000248174 LINC02268 - long intergenic non-protein coding RNA 2268 ncRNA 185174 chr2 79663707 79664886 + 351.373 NA intron (NM_001282598, intron 2 of 17) intron (NM_001282598, intron 2 of 17) -14937 NR_036231 100422888 NR_036231 ENSG00000266436 MIR4264 - microRNA 4264 ncRNA 178761 chr10 12521039 12521903 + 351.373 NA intron (NM_001351032, intron 3 of 11) L1MEf|LINE|L1 -57282 NR_039700 100616151 NR_039700 ENSG00000263584 MIR4480 - microRNA 4480 ncRNA 184910-2 chr2 66941342 66942234 + 351.373 NA intron (NR_110169, intron 3 of 4) MamRep137|DNA|TcMar-Tigger -19298 NR_110600 102724321 Hs.146803 NR_110600 ENSG00000232688 LINC01628 - long intergenic non-protein coding RNA 1628 ncRNA 199053-4 chr5 62984673 62985669 + 351.373 NA Intergenic L1PA16|LINE|L1 406352 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 242711-4 chr2 235297551 235298651 + 351.373 NA Intergenic Intergenic -195942 NM_001037131 116987 Hs.435039 NM_014914 ENSG00000157985 AGAP1 AGAP-1|CENTG2|GGAP1|cnt-g2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 protein-coding 218818-4 chr9 35505746 35506974 + 351.373 NA intron (NM_001330740, intron 1 of 10) MamRep4096|DNA|hAT-Tip100 16249 NM_001330740 9853 Hs.493796 NM_014806 ENSG00000198853 RUSC2 Iporin|MRT61 RUN and SH3 domain containing 2 protein-coding 196154-3 chr2 98322364 98323560 + 351.373 NA Intergenic L1M4a1|LINE|L1 -23193 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 183593-9 chr6 45137236 45138382 + 351.373 NA intron (NM_001350325, intron 2 of 10) L1M4a2|LINE|L1 59961 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA 211000-5 chr4 52083866 52085224 + 351.373 NA intron (NR_144359, intron 6 of 8) L2a|LINE|L2 33241 NM_145263 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding 262125 chr6 169415947 169417489 + 351.373 NA Intergenic L1ME3|LINE|L1 -162604 NM_003247 7058 Hs.371147 NM_003247 ENSG00000186340 THBS2 TSP2 thrombospondin 2 protein-coding 213987-2 chr21 32922693 32924004 + 351.373 NA Intergenic L1M6B|LINE|L1 -35540 NR_135522 102724502 Hs.130572 NR_135522 ENSG00000228961 LINC01690 - long intergenic non-protein coding RNA 1690 ncRNA 183154 chr2 29505218 29506427 + 351.373 NA intron (NM_004304, intron 4 of 28) intron (NM_004304, intron 4 of 28) -30445 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA 183417-2 chr11 2083633 2084535 + 351.373 NA Intergenic L1PA13|LINE|L1 50125 NR_030158 619552 NR_030158 ENSG00000207805 MIR483 MIRN483|hsa-mir-483|mir-483 microRNA 483 ncRNA 183329-5 chr5 26705514 26706397 + 351.373 NA Intergenic Intergenic 332631 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 204324 chr1 233965586 233966739 + 351.373 NA intron (NM_173508, intron 2 of 7) intron (NM_173508, intron 2 of 7) 61486 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding 178234-3 chr14 55469123 55470182 + 351.373 NA Intergenic HAL1b|LINE|L1 -29107 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding 226548 chr10 81538576 81539891 + 351.373 NA Intergenic L1PB1|LINE|L1 -335961 NM_001010848 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 182714-3 chr16 3320832 3321664 + 351.373 NA Intergenic Intergenic 15036 NM_001324041 7627 Hs.513292 NM_153028 ENSG00000162086 ZNF75A - zinc finger protein 75a protein-coding 180167 chr1 238715032 238716192 + 351.373 NA Intergenic Intergenic -229595 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 212493 chr2 168443992 168445013 + 351.373 NA Intergenic MIR|SINE|MIR -11770 NM_203463 253782 Hs.506829 NM_203463 ENSG00000172292 CERS6 CERS5|LASS6 ceramide synthase 6 protein-coding 207223-3 chr15 98819625 98820719 + 351.373 NA intron (NM_000875, intron 2 of 20) intron (NM_000875, intron 2 of 20) 35746 NR_039864 100616432 NR_039864 ENSG00000264480 MIR4714 - microRNA 4714 ncRNA 196066-3 chr3 48364470 48365527 + 351.373 NA Intergenic L1MD2|LINE|L1 -7221 NM_001159927 285231 Hs.288793 NM_207102 ENSG00000164049 FBXW12 FBW12|FBXO12|FBXO35 F-box and WD repeat domain containing 12 protein-coding 200810-2 chr5 105603587 105604894 + 351.373 NA Intergenic MER57E1|LTR|ERV1 504766 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 180079-7 chr9 74056307 74057393 + 351.373 NA Intergenic L1MEd|LINE|L1 -314681 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA 229096-2 chr6 68171853 68172876 + 351.373 NA Intergenic Intergenic 117013 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 264145 chr8 129017316 129018762 + 351.373 NA Intergenic MIRb|SINE|MIR -52038 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA 247806 chr7 30957276 30958552 + 351.373 NA Intergenic L1MEc|LINE|L1 -6039 NM_000823 2692 Hs.767 NM_000823 ENSG00000106128 GHRHR GHRFR|GRFR|IGHD1B|IGHD4 growth hormone releasing hormone receptor protein-coding 232521-3 chr4 31200774 31201833 + 351.373 NA intron (NR_125935, intron 4 of 4) L1ME2|LINE|L1 30159 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 239988-3 chr8 88439795 88441055 + 351.373 NA Intergenic Intergenic -112942 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 203885 chr18 8526245 8527397 + 351.373 NA Intergenic Intergenic -82624 NM_001025300 201475 Hs.270074 NM_001025300 ENSG00000206418 RAB12 - RAB12, member RAS oncogene family protein-coding 241833 chr8 101218839 101220172 + 351.373 NA Intergenic L1MA5|LINE|L1 -13441 NM_001267709 51123 Hs.374485 NM_016096 ENSG00000120963 ZNF706 HSPC038|PNAS-106|PNAS-113 zinc finger protein 706 protein-coding 267044-3 chr8 137469937 137471300 + 351.373 NA Intergenic MSTB|LTR|ERVL-MaLR -57030 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 188248-4 chr18 13143595 13144568 + 351.373 NA Intergenic MLT1E3|LTR|ERVL-MaLR -74679 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 208189-3 chr4 38998449 38999681 + 351.373 NA intron (NM_001303228, intron 1 of 6) intron (NM_001303228, intron 1 of 6) 33344 NM_024943 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding 234805-2 chr5 33384949 33386206 + 351.373 NA Intergenic MSTA-int|LTR|ERVL-MaLR -55119 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding 204675-3 chr16 73530214 73531549 + 351.373 NA Intergenic Intergenic 144076 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 194134-3 chr5 105702127 105702996 + 351.373 NA Intergenic L1MA7|LINE|L1 603087 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 194836-2 chr3 190471618 190472600 + 351.373 NA Intergenic L1MA4|LINE|L1 -22233 NM_207316 131920 Hs.335321 NM_207316 ENSG00000198398 TMEM207 UNQ846 transmembrane protein 207 protein-coding 279869-3 chr9 27236932 27238488 + 351.373 NA Intergenic L1MA8|LINE|L1 45083 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA 194661-3 chr11 80530959 80532189 + 351.373 NA Intergenic LTR1A2|LTR|ERV1 231229 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 187985 chr13 111930432 111931272 + 351.373 NA Intergenic L1MD2|LINE|L1 37356 NR_120401 101928616 Hs.528450 NR_046992 LINC00354 - long intergenic non-protein coding RNA 354 ncRNA 180606-3 chr3 192617510 192618523 + 351.373 NA intron (NM_004113, intron 2 of 5) LTR88b|LTR|Gypsy? 102994 NR_046598 100873987 Hs.628012 NR_046598 ENSG00000230126 FGF12-AS2 - FGF12 antisense RNA 2 ncRNA 263355 chr4 428982 430832 + 351.373 NA intron (NR_002451, intron 2 of 2) L1MB2|LINE|L1 44302 NR_002451 79963 Hs.677493 NM_024903 ENSG00000251595 ABCA11P ABCA11|EST1133530 ATP binding cassette subfamily A member 11, pseudogene pseudo 204851-2 chr10 25355778 25356952 + 351.373 NA intron (NM_020752, intron 2 of 10) L1M3f|LINE|L1 -180089 NR_027333 100128811 Hs.700407 NR_027333 ENSG00000233642 GPR158-AS1 - GPR158 antisense RNA 1 ncRNA 185877-2 chr2 120189589 120190460 + 351.373 NA Intergenic L1MB5|LINE|L1 33376 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding 197648 chr1 118523598 118524643 + 351.373 NA Intergenic L1M1|LINE|L1 -338892 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 180957-4 chr4 31989333 31990212 + 351.373 NA Intergenic Intergenic -7607 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 185086-3 chr2 102344986 102345929 + 351.373 NA non-coding (NR_104167, exon 9 of 9) non-coding (NR_104167, exon 9 of 9) 8200 NM_003856 9173 Hs.66 NM_003856 ENSG00000115602 IL1RL1 DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1 interleukin 1 receptor like 1 protein-coding 187809-12 chr6 61200975 61201894 + 351.373 NA Intergenic MER52-int|LTR|ERV1 -372696 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 213372 chr14 88898004 88899025 + 351.373 NA Intergenic Intergenic 73863 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 227514 chr15 97698696 97699852 + 351.373 NA Intergenic Intergenic -138576 NR_110756 101927310 Hs.560324 NR_110756 ENSG00000259582 LOC101927310 - uncharacterized LOC101927310 ncRNA 199580-4 chr3 56210726 56211993 + 351.373 NA intron (NR_132749, intron 3 of 17) L1PB1|LINE|L1 257108 NM_015576 26059 Hs.476389 NM_015576 ENSG00000187672 ERC2 CAST|CAST1|ELKSL|SPBC110|Spc110 ELKS/RAB6-interacting/CAST family member 2 protein-coding 265023-2 chr8 134749804 134751163 + 351.373 NA Intergenic L1ME3A|LINE|L1 -37452 NR_110323 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding 245874-2 chr2 129545100 129546735 + 351.373 NA Intergenic Intergenic -272026 NR_122042 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA 214074 chr12 17998427 17999622 + 351.373 NA Intergenic L1M3e|LINE|L1 91169 NM_024730 79785 Hs.732831 NM_024730 ENSG00000111404 RERGL - RERG like protein-coding 199141-3 chr17 61181766 61183058 + 351.373 NA intron (NM_001330413, intron 23 of 25) L1MC5|LINE|L1 185292 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 195803 chr10 14124379 14125378 + 351.373 NA intron (NR_134578, intron 2 of 3) intron (NR_134578, intron 2 of 3) 50594 NR_120638 101928453 Hs.650212 NR_120638 LOC101928453 - uncharacterized LOC101928453 ncRNA 200459-5 chr6 156604110 156604987 + 351.373 NA Intergenic Intergenic -173307 NM_001346813 57492 Hs.291587 NM_017519 ENSG00000049618 ARID1B 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R AT-rich interaction domain 1B protein-coding 200986-5 chr3 183558250 183559339 + 351.373 NA Intergenic L2|LINE|L2 -3088 NM_130446 89857 Hs.659147 NM_130446 ENSG00000172578 KLHL6 - kelch like family member 6 protein-coding 210209-4 chr3 43226946 43227904 + 351.373 NA Intergenic L1PB2|LINE|L1 -59087 NM_001330750 54861 Hs.476052 NM_017719 ENSG00000163788 SNRK HSNFRK SNF related kinase protein-coding 231292 chr19 9340794 9342063 + 351.373 NA intron (NM_001202407, intron 5 of 5) intron (NM_001202407, intron 5 of 5) 16733 NM_001202425 100529215 Hs.728944 NM_001172650 ENSG00000270011 ZNF559-ZNF177 - ZNF559-ZNF177 readthrough protein-coding 191586-3 chr12 1854882 1855704 + 351.373 NA intron (NM_172364, intron 22 of 37).2 intron (NM_172364, intron 22 of 37).2 34728 NM_001163926 654429 Hs.585579 NM_001039029 ENSG00000166159 LRTM2 - leucine rich repeats and transmembrane domains 2 protein-coding 186843-3 chr2 118519209 118520207 + 351.373 NA Intergenic MLT1K|LTR|ERVL-MaLR 83258 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA 188073 chr15 57876258 57877092 + 351.373 NA Intergenic L1M3f|LINE|L1 137348 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding 178849-9 chr7 51098493 51099460 + 351.373 NA intron (NM_015198, intron 6 of 12) L1MB2|LINE|L1 217833 NM_015198 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding 214250-3 chr19 36627065 36628079 + 351.373 NA 3' UTR (NM_032825, exon 5 of 5) 3' UTR (NM_032825, exon 5 of 5) 22259 NM_001256838 84911 Hs.631591 NM_032825 ENSG00000161298 ZNF382 KS1 zinc finger protein 382 protein-coding 272227 chr1 112172159 112173521 + 351.373 NA Intergenic MLT1J-int|LTR|ERVL-MaLR 182304 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 207398-5 chr7 54285841 54286814 + 351.373 NA Intergenic L1M3c|LINE|L1 -44370 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 177532-3 chr6 125408106 125409223 + 351.373 NA Intergenic L3|LINE|CR1 -106697 NM_016063 51020 Hs.32826 NM_016063 ENSG00000111906 HDDC2 C6orf74|CGI-130|NS5ATP2|dJ167O5.2 HD domain containing 2 protein-coding 236211-2 chr10 111464523 111465661 + 351.373 NA Intergenic Intergenic 350801 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 231994-2 chr2 11519851 11521030 + 351.373 NA Intergenic MLT1E2|LTR|ERVL-MaLR -13605 NM_014668 9687 Hs.467733 NM_014668 ENSG00000196208 GREB1 - growth regulating estrogen receptor binding 1 protein-coding 353394 chr12 37910837 37912566 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -405073 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 235420 chr17 52358687 52360239 + 351.373 NA Intergenic Intergenic -31059 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA 226021-4 chr19 37096886 37098562 + 351.373 NA non-coding (NR_138039, exon 6 of 6) non-coding (NR_138039, exon 6 of 6) 19291 NM_001329521 147923 Hs.444992 NM_144689 ENSG00000197050 ZNF420 APAK zinc finger protein 420 protein-coding 193958-7 chr4 43683042 43683928 + 351.373 NA Intergenic Arthur1|DNA|hAT-Tip100 -190942 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 178146-2 chr11 88067688 88068503 + 351.373 NA Intergenic Intergenic 107348 NM_022337 23682 Hs.591975 NM_022337 ENSG00000123892 RAB38 NY-MEL-1|rrGTPbp RAB38, member RAS oncogene family protein-coding 233136 chr3 4194775 4196055 + 351.373 NA Intergenic L4_B_Mam|LINE|RTE-X -107889 NM_001320678 6419 Hs.475300 NM_006515 ENSG00000170364 SETMAR METNASE|Mar1 SET domain and mariner transposase fusion gene protein-coding 267044 chr2 136850419 136851622 + 351.373 NA intron (NM_001316349, intron 1 of 27) L1MEi|LINE|L1 85475 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 206432-2 chr11 113604127 113605495 + 351.373 NA Intergenic L1PA6|LINE|L1 101497 NM_001288749 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding 197121-3 chr2 51614596 51615610 + 351.373 NA intron (NR_135237, intron 5 of 10) THE1C-int|LTR|ERVL-MaLR 582502 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 182363-4 chr22 49297583 49298403 + 351.373 NA Intergenic Intergenic 245473 NR_037440 100500882 NR_037440 ENSG00000264139 MIR3667 - microRNA 3667 ncRNA 178234-6 chr19 49258082 49258849 + 351.373 NA Intergenic L1MB5|LINE|L1 50403 NR_036209 100422979 NR_036209 ENSG00000265407 MIR4324 mir-4324 microRNA 4324 ncRNA 180167-5 chr2 49370767 49371749 + 351.373 NA Intergenic Intergenic -216731 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding 196945-8 chr8 137588981 137589874 + 351.373 NA Intergenic MLT2C2|LTR|ERVL -175839 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 210385-5 chr5 42293882 42294891 + 351.373 NA Intergenic Intergenic -119041 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 182890-3 chr14 72040986 72041942 + 351.373 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) 107937 NM_001370277 9628 Hs.509872 NM_004296 ENSG00000182732 RGS6 GAP|HA117|S914 regulator of G protein signaling 6 protein-coding 207398 chr10 109528987 109530181 + 351.373 NA Intergenic L1PA15-16|LINE|L1 393662 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 191762-6 chr2 49156415 49157371 + 351.373 NA Intergenic L1ME3F|LINE|L1 -2366 NM_000145 2492 Hs.1428 NM_000145 ENSG00000170820 FSHR FSHR1|FSHRO|LGR1|ODG1 follicle stimulating hormone receptor protein-coding 202303-2 chr5 178979386 178980579 + 351.373 NA 3' UTR (NM_000843, exon 11 of 11) 3' UTR (NM_000843, exon 11 of 11) 15338 NM_000843 2916 Hs.248131 NM_000843 ENSG00000113262 GRM6 CSNB1B|GPRC1F|MGLUR6|mGlu6 glutamate metabotropic receptor 6 protein-coding 254482 chr1 79525255 79526802 + 351.373 NA Intergenic Charlie15a|DNA|hAT-Charlie -519298 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding 252989 chr11 48207718 48209044 + 351.373 NA Intergenic Intergenic -8429 NM_001005470 119765 Hs.553566 NM_001005470 ENSG00000175619 OR4B1 OR11-106|OST208 olfactory receptor family 4 subfamily B member 1 protein-coding 195451-2 chr2 121679295 121680221 + 351.373 NA intron (NR_037857, intron 2 of 3) LTR23-int|LTR|ERV1 29769 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 192113-2 chr14 56918122 56918950 + 351.373 NA intron (NR_029385, intron 3 of 3) intron (NR_029385, intron 3 of 3) 105378 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA 199317-8 chr7 61941959 61943203 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 1361475 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 202391 chr1 147302656 147303626 + 351.373 NA Intergenic L1MEh|LINE|L1 59999 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding 211790-5 chr19 40032917 40034028 + 351.373 NA 3' UTR (NM_001005851, exon 5 of 5) 3' UTR (NM_001005851, exon 5 of 5) 22759 NM_001005851 163131 Hs.101139 NM_001005851 ENSG00000128000 ZNF780B ZNF779 zinc finger protein 780B protein-coding 195627 chr10 76491745 76492555 + 351.373 NA intron (NM_001305581, intron 6 of 6) L1M1|LINE|L1 -395894 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 219433-4 chr8 112398501 112399673 + 351.373 NA intron (NM_001363185, intron 31 of 66) AluSx|SINE|Alu -244406 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 184735-7 chr8 46472107 46473104 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 145038 NR_146077 389652 NR_146077 ENSG00000248498 ASNSP1 ASNSL1 asparagine synthetase pseudogene 1 pseudo 182890-4 chr18 2203724 2204641 + 351.373 NA Intergenic L2b|LINE|L2 367323 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 210121-3 chr7 33701391 33702680 + 351.373 NA Intergenic Intergenic -202880 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding 199668 chr17 83167872 83169095 + 351.373 NA Intergenic L1MC1|LINE|L1 -58414 NR_029406 388574 Hs.546918 NR_029406 ENSG00000232938 RPL23AP87 - ribosomal protein L23a pseudogene 87 pseudo 285842-2 chr15 76635560 76637006 + 351.373 NA intron (NR_148227, intron 21 of 32) L1MB4|LINE|L1 49636 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA 241569-2 chr7 33300328 33301643 + 351.373 NA intron (NM_198428, intron 9 of 22) L1MEg|LINE|L1 171421 NM_001348043 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding 195100-5 chr8 86250271 86251192 + 351.373 NA Intergenic L1MA1|LINE|L1 -20350 NM_138817 157724 Hs.149095 NM_138817 ENSG00000164893 SLC7A13 AGT-1|AGT1|XAT2 solute carrier family 7 member 13 protein-coding 196330-2 chr2 96436967 96437950 + 351.373 NA Intergenic LTR24C|LTR|ERV1 67899 NM_001285486 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding 186404-2 chr12 58431406 58432788 + 351.373 NA Intergenic Intergenic -159605 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA 183241-6 chr19 37541914 37542971 + 351.373 NA 3' UTR (NM_001013659, exon 8 of 8) 3' UTR (NM_001013659, exon 8 of 8) -6507 NR_038248 100507433 Hs.121283 NR_038247 ENSG00000267470 ZNF571-AS1 - ZNF571 antisense RNA 1 ncRNA 203006-3 chr5 92250094 92251252 + 351.373 NA Intergenic L1PA15|LINE|L1 -867356 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 272666-2 chr2 161809802 161811084 + 351.373 NA intron (NM_001354443, intron 4 of 25) L1PA16|LINE|L1 186027 NM_001354442 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding 212757-3 chr2 31036757 31037682 + 351.373 NA intron (NM_024572, intron 1 of 14) L1M4|LINE|L1 92421 NM_001253827 79623 Hs.468058 NM_024572 ENSG00000158089 GALNT14 GALNT15|GalNac-T10|GalNac-T14 polypeptide N-acetylgalactosaminyltransferase 14 protein-coding 216973-4 chr2 196650683 196651738 + 351.373 NA intron (NM_001353339, intron 2 of 22) L1MA7|LINE|L1 11495 NM_001353339 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding 297262 chr3 41664558 41666263 + 351.373 NA intron (NR_136342, intron 27 of 34) intron (NR_136342, intron 27 of 34) 296693 NR_136342 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding 182011-7 chr8 140032510 140033417 + 351.373 NA intron (NM_001160372, intron 17 of 22) L1ME4b|LINE|L1 67572 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 212405-3 chr8 136905398 136906530 + 351.373 NA Intergenic MLT1D|LTR|ERVL-MaLR 375166 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 231028-2 chr4 35711345 35712723 + 351.373 NA Intergenic Intergenic 531905 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 178410-4 chr9 73404303 73404949 + 351.373 NA Intergenic Intergenic 252761 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding 236562-4 chr4 31531354 31532448 + 351.373 NA intron (NR_149121, intron 1 of 2) L1MA4|LINE|L1 25357 NR_149121 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA 190181-3 chr17 55890967 55891969 + 351.373 NA Intergenic HAL1ME|LINE|L1 140363 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding 199844 chr12 13751257 13752398 + 351.373 NA intron (NM_000834, intron 3 of 12) L2c|LINE|L2 228529 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding 274335 chr5 45153845 45154967 + 351.373 NA Intergenic LTR16B|LTR|ERVL 345459 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 186316-3 chr14 58051048 58051956 + 351.373 NA intron (NM_001001872, intron 5 of 7) intron (NM_001001872, intron 5 of 7) 100711 NM_001001872 145407 Hs.26766 NM_001001872 ENSG00000139971 ARMH4 C14orf37|UT2|c14_5376 armadillo like helical domain containing 4 protein-coding 178234-5 chr16 5707802 5708749 + 351.373 NA Intergenic L2a|LINE|L2 75808 NR_107032 102465867 NR_107032 ENSG00000273648 MIR8065 hsa-mir-8065 microRNA 8065 ncRNA 236299-2 chr4 58328364 58329831 + 351.373 NA Intergenic Intergenic 207231 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA 183944-12 chr7 64495650 64496713 + 351.373 NA Intergenic AluSx1|SINE|Alu 62488 NR_029404 649395 Hs.728871 NR_029404 YWHAEP1 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 pseudo 178322-10 chr8 77083774 77084628 + 351.373 NA Intergenic Intergenic -83157 NM_001172086 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 185965 chr1 238133548 238134535 + 351.373 NA Intergenic Intergenic -243119 NM_021186 57829 Hs.136241 NM_021186 ENSG00000116996 ZP4 ZBP|ZP1|ZPB|Zp-4 zona pellucida glycoprotein 4 protein-coding 179376-8 chr4 45977847 45978965 + 351.373 NA Intergenic L1PA7|LINE|L1 145648 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding 240427-2 chr3 189551791 189552905 + 351.373 NA Intergenic L1MEc|LINE|L1 -44398 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding 213372-2 chr2 126417912 126419030 + 351.373 NA Intergenic L1M4c|LINE|L1 -237464 NM_001256584 2995 Hs.59138 NM_002101 ENSG00000136732 GYPC CD236|CD236R|GE|GE:GPC:GPD:GYPD|GPC|GPD|GYPD|PAS-2|PAS-2' glycophorin C (Gerbich blood group) protein-coding 257469 chr19 12187569 12189348 + 351.373 NA 3' UTR (NM_003437, exon 4 of 4) 3' UTR (NM_003437, exon 4 of 4) -6557 NR_104179 100289333 Hs.662603 NR_104179 LOC100289333 - uncharacterized LOC100289333 ncRNA 177532-2 chr18 4962848 4963845 + 351.373 NA Intergenic L1MA2|LINE|L1 -117836 NR_146900 105371969 Hs.599709 NR_146900 LINC01892 - long intergenic non-protein coding RNA 1892 ncRNA 186052-6 chr9 105569139 105570150 + 351.373 NA intron (NM_001351498, intron 1 of 9) intron (NM_001351498, intron 1 of 9) 11513 NR_147213 2218 Hs.55777 NM_006731 ENSG00000106692 FKTN CMD1X|FCMD|LGMD2M|LGMDR13|MDDGA4|MDDGB4|MDDGC4 fukutin protein-coding 245434-2 chr1 57528704 57529963 + 351.373 NA intron (NM_001353980, intron 4 of 5) L1MEg|LINE|L1 -104412 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 272139 chr1 113480044 113481977 + 351.373 NA intron (NM_001142782, intron 1 of 20) intron (NM_001142782, intron 1 of 20) 90495 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 213723-2 chr2 199808858 199809840 + 351.373 NA TTS (NM_001363886) TTS (NM_001363886) 41824 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding 213459-2 chr1 185010802 185012014 + 351.373 NA Intergenic L2a|LINE|L2 9881 NR_146489 101929069 Hs.497170 NR_146489 ENSG00000260976 LINC01633 GS1-120K12.4 long intergenic non-protein coding RNA 1633 ncRNA 186667-5 chr6 170120949 170121795 + 351.373 NA Intergenic L1MEf|LINE|L1 -39270 NR_125878 102724511 Hs.550045 NR_125878 LOC102724511 - uncharacterized LOC102724511 ncRNA 214250 chr1 164032757 164033649 + 351.373 NA Intergenic L1M4b|LINE|L1 -526157 NM_001204963 5087 Hs.557097 NM_002585 ENSG00000185630 PBX1 CAKUHED PBX homeobox 1 protein-coding 190971-2 chr7 71881926 71882711 + 351.373 NA intron (NM_001363460, intron 4 of 5) MLT1D|LTR|ERVL-MaLR 455073 NM_001017440 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding 180870-2 chr8 43855306 43856286 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 563354 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 195276-6 chr7 62843761 62844603 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 459874 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 217149-5 chr2 107145536 107146593 + 351.373 NA Intergenic Intergenic 203461 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA 211175-2 chr8 136913236 136914335 + 351.373 NA Intergenic MER41-int|LTR|ERV1 382987 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 180694-10 chr6 26643024 26643895 + 351.373 NA intron (NM_001242798, intron 2 of 2) L2a|LINE|L2 16287 NM_024639 79692 Hs.126280 NM_024639 ENSG00000181315 ZNF322 HCG12|ZNF322A|ZNF388|ZNF489 zinc finger protein 322 protein-coding 226197 chr16 78920736 78922006 + 351.373 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 679366 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 183241-2 chr1 73240556 73241599 + 351.373 NA Intergenic Intergenic -65093 NR_110676 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA 234103-2 chr5 125641768 125643001 + 351.373 NA Intergenic L1MA7|LINE|L1 149123 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA 244819-3 chr8 64946595 64947836 + 351.373 NA Intergenic Intergenic -148478 NM_004820 9420 Hs.657330 NM_004820 ENSG00000172817 CYP7B1 CBAS3|CP7B|SPG5A cytochrome P450 family 7 subfamily B member 1 protein-coding 192114 chr1 213939052 213940058 + 351.373 NA intron (NR_037850, intron 2 of 5) L1MEg|LINE|L1 14806 NR_046189 100861504 Hs.742586 NR_046189 LINC00538 PROX1UT|Yiya long intergenic non-protein coding RNA 538 ncRNA 196242-2 chr12 118802549 118803548 + 351.373 NA Intergenic L1MB7|LINE|L1 30488 NR_134997 105370016 Hs.550627 NR_134997 ENSG00000255814 LINC02439 - long intergenic non-protein coding RNA 2439 ncRNA 177444-6 chr5 12297097 12297934 + 351.373 NA Intergenic Intergenic -277342 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA 177883-6 chr3 42914242 42914991 + 351.373 NA exon (NM_001134656, exon 4 of 4) exon (NM_001134656, exon 4 of 4) 8474 NM_001134656 389114 Hs.720173 NM_207404 ENSG00000182983 ZNF662 - zinc finger protein 662 protein-coding 195539-6 chr21 19153399 19154249 + 351.373 NA Intergenic Intergenic -394012 NR_109925 101927797 Hs.551743 NR_109925 MIR548XHG - MIR548X host gene ncRNA 193870 chr17 52356620 52357996 + 351.373 NA Intergenic Intergenic -33214 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA 242711-7 chr6 159022685 159023908 + 351.373 NA Intergenic L1MEf|LINE|L1 19057 NM_001278733 117289 Hs.529984 NM_054114 ENSG00000164691 TAGAP ARHGAP47|FKSG15|IDDM21|TAGAP1 T cell activation RhoGTPase activating protein protein-coding 189039-8 chr8 124764684 124765800 + 351.373 NA Intergenic MIR3|SINE|MIR -36735 NM_014751 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding 190532-10 chr5 40366010 40366817 + 351.373 NA Intergenic MLT2B4|LTR|ERVL -313502 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding 185789 chr11 54782927 54783781 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 76522 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 193431 chr5 119726180 119727023 + 351.373 NA Intergenic THE1D|LTR|ERVL-MaLR 97042 NM_182761 340069 Hs.713304 NM_182761 ENSG00000164334 FAM170A ZNFD family with sequence similarity 170 member A protein-coding 183066 chr1 95836712 95837774 + 351.373 NA Intergenic L1MA4A|LINE|L1 -154825 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA 184735-5 chr3 105074615 105075600 + 351.373 NA Intergenic L1ME1|LINE|L1 -291606 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 180430-9 chr5 123940400 123941356 + 351.373 NA Intergenic Intergenic 395461 NM_001270572 1456 Hs.129206 NM_004384 ENSG00000151292 CSNK1G3 CKI-gamma 3|CSNK1G3L casein kinase 1 gamma 3 protein-coding 184471 chr1 247142310 247143086 + 351.373 NA intron (NM_001297567, intron 3 of 3) intron (NM_001297567, intron 3 of 3) 29319 NM_001243740 7678 Hs.421238 NM_003431 ENSG00000196418 ZNF124 HZF-16|HZF16|ZK7 zinc finger protein 124 protein-coding 183681-2 chr15 25126429 25127299 + 351.373 NA intron (NR_146177, intron 61 of 147) L1MC4a|LINE|L1 -8778 NR_022009 145624 Hs.612027 NR_022009 ENSG00000279050 PWAR1 D15S227E|PAR-1|PAR1 Prader Willi/Angelman region RNA 1 ncRNA 209243-3 chr11 29152451 29153711 + 351.373 NA Intergenic L1MB7|LINE|L1 -441332 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA 195276 chr22 30974689 30975808 + 351.373 NA non-coding (NR_152867, exon 4 of 4) non-coding (NR_152867, exon 4 of 4) 6037 NR_110492 55000 Hs.554829 NR_002323 ENSG00000253352 TUG1 LINC00080|NCRNA00080|TI-227H taurine up-regulated 1 ncRNA 221277-2 chr2 53529070 53529997 + 351.373 NA Intergenic HAL1|LINE|L1 -238250 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding 265024 chr15 61333324 61334983 + 351.373 NA Intergenic Intergenic -104851 NM_134261 6095 Hs.560343 NM_002943 ENSG00000069667 RORA IDDECA|NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA RAR related orphan receptor A protein-coding 180079 chr18 8896483 8897354 + 351.373 NA Intergenic Intergenic 179537 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding 215831 chr1 65735826 65736952 + 351.373 NA Intergenic Intergenic -56121 NM_001297440 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding 218115-6 chr5 23127714 23129105 + 351.373 NA Intergenic Intergenic -275065 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 256151-2 chr8 121217096 121218327 + 351.373 NA Intergenic Intergenic -405665 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 190796-8 chr8 134265668 134266949 + 351.373 NA Intergenic Intergenic -331763 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 179728-7 chr6 126672830 126673968 + 351.373 NA Intergenic L1MC4|LINE|L1 188768 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA 223386-4 chr22 48670059 48671354 + 351.373 NA intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) 94366 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding 217588-4 chr7 113961344 113962509 + 351.373 NA Intergenic MIR3|SINE|MIR -42917 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding 187546-3 chr20 55716372 55717441 + 351.373 NA Intergenic Intergenic 288613 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding 179815-7 chr5 46250100 46250864 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -554102 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 263354 chr11 79002710 79004188 + 351.373 NA intron (NM_001098816, intron 6 of 33) L1PA13|LINE|L1 398660 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA 214865-4 chr8 126663948 126665207 + 351.373 NA Intergenic MER110A|LTR|ERV1 -106099 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 181309-4 chr10 43974933 43975877 + 351.373 NA intron (NR_136147, intron 4 of 4) L1MD2|LINE|L1 63003 NR_136148 283033 Hs.178244 NR_033846 LINC00841 - long intergenic non-protein coding RNA 841 ncRNA 191147-3 chr14 66305968 66307176 + 351.373 NA Intergenic Intergenic -179799 NR_110308 440184 Hs.412138 NM_001004331 ENSG00000196553 CCDC196 C14orf53|LINC00238|NCRNA00238 coiled-coil domain containing 196 protein-coding 215041-4 chr4 79658205 79659149 + 351.373 NA Intergenic L1PA16|LINE|L1 166084 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA 269943 chr8 96682514 96684210 + 351.373 NA intron (NM_016134, intron 1 of 7) L1MA4|LINE|L1 38120 NM_016134 10404 Hs.156178 NM_016134 ENSG00000104324 CPQ LDP|PGCP carboxypeptidase Q protein-coding 208277 chr14 19864506 19865702 + 351.373 NA Intergenic Intergenic 4069 NR_145507 283617 NM_001348266 ENSG00000176290 OR4K3 OR14-10|OR4K3P olfactory receptor family 4 subfamily K member 3 (gene/pseudogene) protein-coding 192641-3 chr19 51994575 51995772 + 351.373 NA intron (NM_198480, intron 5 of 5) intron (NM_198480, intron 5 of 5) -8333 NM_021632 59348 Hs.407694 NM_021632 ENSG00000256683 ZNF350 ZBRK1|ZFQR zinc finger protein 350 protein-coding 182451-4 chr15 91840978 91842063 + 351.373 NA Intergenic Intergenic -12188 NM_013272 28232 Hs.311187 NM_013272 ENSG00000176463 SLCO3A1 OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11 solute carrier organic anion transporter family member 3A1 protein-coding 178322-8 chr5 122304621 122305877 + 351.373 NA Intergenic Intergenic -6442 NR_131762 9627 Hs.426463 NM_005460 ENSG00000064692 SNCAIP SYPH1|Sph1 synuclein alpha interacting protein protein-coding 185174-3 chr7 51828464 51829522 + 351.373 NA Intergenic Intergenic -435737 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA 183241 chr1 42516652 42517843 + 351.373 NA intron (NM_001355227, intron 6 of 18) AluJr4|SINE|Alu -15773 NM_001080850 728621 Hs.729640 NM_001080850 ENSG00000186409 CCDC30 PFD6L|PFDN6L coiled-coil domain containing 30 protein-coding 228129-4 chr8 110008749 110009644 + 351.373 NA Intergenic L1M1|LINE|L1 -33425 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 187546-4 chr4 32613255 32614326 + 351.373 NA Intergenic Intergenic 262752 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 272929-3 chr2 218086261 218087882 + 351.373 NA intron (NR_034176, intron 12 of 13) HAL1|LINE|L1 18056 NM_198483 285180 Hs.570069 NM_198483 ENSG00000188282 RUFY4 ZFYVE31 RUN and FYVE domain containing 4 protein-coding 181045 chr10 43638759 43639887 + 351.373 NA intron (NR_038867, intron 1 of 4) L1M5|LINE|L1 -4549 NR_047557 414197 Hs.605832 NR_047557 ENSG00000226245 ZNF32-AS1 ZNF32OS1|bA402L1.8 ZNF32 antisense RNA 1 ncRNA 178234-9 chr8 138365250 138365994 + 351.373 NA intron (NM_015912, intron 2 of 19) Charlie7|DNA|hAT-Charlie 131639 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 177971-4 chr4 35949866 35950711 + 351.373 NA Intergenic Intergenic 293651 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 262827-3 chr8 127371576 127372896 + 351.373 NA intron (NR_117099, intron 3 of 3) intron (NR_117099, intron 3 of 3) -28163 NR_109834 101805488 Hs.745578 NR_109834 ENSG00000280997 CCAT2 LINC00873|NCCP1 colon cancer associated transcript 2 ncRNA 220048-2 chr3 19656596 19657838 + 351.373 NA Intergenic L1M3de|LINE|L1 277000 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding 186667-7 chr8 118876949 118877785 + 351.373 NA Intergenic L2c|LINE|L2 74518 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding 206432-9 chr8 32949472 32950425 + 351.373 NA Intergenic L1M4|LINE|L1 228113 NM_001322197 3084 Hs.453951 NM_004495 ENSG00000157168 NRG1 ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF neuregulin 1 protein-coding 189917-2 chr2 51876668 51877424 + 351.373 NA intron (NR_135237, intron 7 of 10) L1MA2|LINE|L1 -493602 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 284525-2 chr16 62679573 62681154 + 351.373 NA Intergenic Intergenic -643925 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 221190-2 chr21 27332667 27333744 + 351.373 NA Intergenic Intergenic -366117 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 180167-6 chr2 133898674 133899872 + 351.373 NA Intergenic Intergenic -220662 NM_001371457 207574-3 chr19 56602846 56603713 + 351.373 NA intron (NR_163263, intron 2 of 4) L1MB8|LINE|L1 7977 NR_163262 114818278 NR_163262 ZNF71-SMIM17 - ZNF71-SMIM17 readthrough (NMD candidate) ncRNA 205641-4 chr8 118536559 118537755 + 351.373 NA intron (NM_001101676, intron 2 of 4) L1M1|LINE|L1 -83844 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 200898-4 chr5 3361080 3362258 + 351.373 NA Intergenic Intergenic -91147 NR_147000 105374624 Hs.518991 NR_147000 ENSG00000249830 LINC02162 - long intergenic non-protein coding RNA 2162 ncRNA 206871-2 chr13 99761657 99762798 + 351.373 NA intron (NR_120421, intron 3 of 4) L1MA4|LINE|L1 -33226 NR_120384 101927465 Hs.130690 NR_046525 CLYBL-AS1 - CLYBL antisense RNA 1 ncRNA 200986-4 chr2 80173275 80174344 + 351.373 NA intron (NM_001282598, intron 7 of 17) LTR41B|LTR|ERVL 130943 NM_178839 347730 Hs.591580 NM_178839 ENSG00000162951 LRRTM1 - leucine rich repeat transmembrane neuronal 1 protein-coding 180430-11 chr9 29293684 29294713 + 351.373 NA Intergenic L1M1|LINE|L1 -80597 NM_001354574 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 187106-6 chr8 50805248 50806147 + 351.373 NA Intergenic MER61-int|LTR|ERV1 641566 NM_001321778 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding 177619 chr10 10204502 10205415 + 351.373 NA Intergenic L1MA7|LINE|L1 146236 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA 180430-7 chr3 107176068 107177088 + 351.373 NA intron (NR_028303, intron 1 of 3) THE1D-int|LTR|ERVL-MaLR 64060 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA 205817-6 chr8 43663813 43664820 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 371874 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 183768-6 chr4 14236850 14237849 + 351.373 NA Intergenic MER44C|DNA|TcMar-Tigger 125381 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA 210385-7 chr6 65150325 65151289 + 351.373 NA intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -150611 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 239637-2 chr16 51314347 51315781 + 351.373 NA intron (NR_039672, intron 6 of 6) Tigger18a|DNA|TcMar-Tigger -163792 NM_002968 6299 Hs.135787 NM_002968 ENSG00000103449 SALL1 HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 spalt like transcription factor 1 protein-coding 180694-9 chr3 192236110 192237013 + 351.373 NA intron (NM_004113, intron 4 of 5) L1PA15|LINE|L1 -2069 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 190796-3 chr12 64352846 64353900 + 351.373 NA intron (NM_001099676, intron 1 of 10) AluSz|SINE|Alu 37385 NM_001099676 115749 Hs.535190 NM_001099676 ENSG00000185306 C12orf56 - chromosome 12 open reading frame 56 protein-coding 182187-8 chr5 24009696 24010705 + 351.373 NA intron (NR_131245, intron 4 of 4) L1PA15|LINE|L1 58852 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA 181924-3 chr11 10045667 10046653 + 351.373 NA intron (NM_030962, intron 2 of 39) MER2|DNA|TcMar-Tigger 207018 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA 189215-9 chr8 135140214 135141182 + 351.373 NA Intergenic MLT1K|LTR|ERVL-MaLR -93433 NR_026706 286094 Hs.440978 NR_026706 ENSG00000254083 LINC01591 - long intergenic non-protein coding RNA 1591 ncRNA 192728-6 chr6 148047626 148048675 + 351.373 NA Intergenic L1MEd|LINE|L1 -224178 NM_001346505 23328 Hs.193133 NM_015278 ENSG00000111961 SASH1 CAPOK|DUH1|SH3D6A|dJ323M4.1 SAM and SH3 domain containing 1 protein-coding 187809-7 chr2 226520103 226521209 + 351.373 NA Intergenic Intergenic 138137 NR_049887 100847053 NR_049887 ENSG00000263363 MIR5702 - microRNA 5702 ncRNA 192289-5 chr2 112108404 112109436 + 351.373 NA intron (NM_001329914, intron 17 of 18) L1M4|LINE|L1 -29465 NM_001128165 129804 Hs.437696 NM_153214 ENSG00000144152 FBLN7 TM14 fibulin 7 protein-coding 183856-8 chr7 41907957 41909219 + 351.373 NA Intergenic MER41B|LTR|ERV1 -205498 NM_002192 3624 Hs.28792 NM_002192 ENSG00000122641 INHBA EDF|FRP inhibin subunit beta A protein-coding 178849-8 chr4 52331591 52332538 + 351.373 NA Intergenic MLT1J|LTR|ERVL-MaLR 280760 NM_145263 132671 Hs.527090 NM_145263 ENSG00000163071 SPATA18 Mieap|SPETEX1 spermatogenesis associated 18 protein-coding 190972-2 chr5 62991135 62992035 + 351.373 NA Intergenic L1MC1|LINE|L1 412766 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 210385 chr10 39153288 39154301 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 457198 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 289268 chr11 50657484 50658857 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 249023 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 191147-7 chr8 139077517 139078790 + 351.373 NA Intergenic Intergenic -164112 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 185262-3 chr20 42131896 42133015 + 351.373 NA intron (NM_133170, intron 19 of 31) L1MC2|LINE|L1 -514078 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 195012-5 chr2 103198611 103199473 + 351.373 NA Intergenic Intergenic -214613 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 185964-4 chr20 58052013 58052960 + 351.373 NA Intergenic Intergenic 48582 NR_147083 105376992 Hs.736662 NR_147083 ENSG00000275852 LINC01742 - long intergenic non-protein coding RNA 1742 ncRNA 190181-5 chr3 89892409 89893423 + 351.373 NA Intergenic Intergenic 785295 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 214689 chr11 10043735 10044764 + 351.373 NA intron (NM_030962, intron 2 of 39) L1MC|LINE|L1 205107 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA 224264-5 chr6 130157630 130158507 + 351.373 NA intron (NM_001277185, intron 7 of 10) L1ME3F|LINE|L1 57817 NM_001277185 154075 Hs.440508 NM_152552 ENSG00000164483 SAMD3 - sterile alpha motif domain containing 3 protein-coding 192201-5 chr22 48675982 48677149 + 351.373 NA intron (NM_001082967, intron 2 of 3) intron (NM_001082967, intron 2 of 3) 100225 NM_015381 25817 Hs.436854 NM_015381 ENSG00000219438 TAFA5 FAM19A5|QLLK5208|TAFA-5|UNQ5208 TAFA chemokine like family member 5 protein-coding 213635 chr11 91988349 91989563 + 351.373 NA Intergenic L1PA16|LINE|L1 -236078 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding 181572-12 chr7 62825820 62826722 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr 477785 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 208364-4 chr5 110802259 110803186 + 351.373 NA Intergenic L1PA15-16|LINE|L1 63715 NM_138773 91137 Hs.75639 NM_138773 ENSG00000164209 SLC25A46 HMSN6B solute carrier family 25 member 46 protein-coding 181309-7 chr2 135326969 135327986 + 351.373 NA intron (NM_001286569, intron 6 of 21) HAL1|LINE|L1 190849 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA 189214 chr11 55047621 55048394 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -214148 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 232434-4 chr5 124013227 124014552 + 351.373 NA Intergenic L2c|LINE|L2 424631 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 183153-10 chr7 64519623 64520464 + 351.373 NA 3' UTR (NM_178558, exon 4 of 4) 3' UTR (NM_178558, exon 4 of 4) 43028 NM_178558 340252 Hs.520886 NM_178558 ENSG00000173041 ZNF680 - zinc finger protein 680 protein-coding 192816-3 chr9 79033617 79034822 + 351.373 NA Intergenic LTR28B|LTR|ERV1 111447 NR_109771 101927450 Hs.738041 NR_109771 ENSG00000260995 LOC101927450 - uncharacterized LOC101927450 ncRNA 210736-2 chr14 81897868 81899027 + 351.373 NA Intergenic L1MA8|LINE|L1 -155309 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 234015 chr10 91657333 91658464 + 351.373 NA Intergenic L1ME1|LINE|L1 -24827 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding 212230-2 chr18 61785538 61786501 + 351.373 NA Intergenic Intergenic 37843 NR_103449 100996669 Hs.586981 NR_103449 LINC01544 - long intergenic non-protein coding RNA 1544 ncRNA 189127 chr2 210504439 210505715 + 351.373 NA intron (NM_001122633, intron 1 of 38) intron (NM_001122633, intron 1 of 38) -14641 NM_001369256 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 221102-3 chr2 29646910 29648398 + 351.373 NA intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -172277 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA 204148-2 chr12 37810065 37811319 + 351.373 NA Intergenic ALR/Alpha|Satellite|centr -506082 NM_001013620 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 181309-2 chr1 218635026 218635992 + 263.53 NA intron (NR_031644, intron 3 of 6) L1PA16|LINE|L1 125414 NR_146760 440714 Hs.146774 NR_146760 ENSG00000228208 C1orf143 - chromosome 1 open reading frame 143 (putative) ncRNA 196857-2 chr2 72473062 72474350 + 263.53 NA intron (NM_001321730, intron 16 of 21) L1M2|LINE|L1 -325844 NM_001277742 56603 Hs.91546 NM_019885 ENSG00000003137 CYP26B1 CYP26A2|P450RAI-2|P450RAI2|RHFCA cytochrome P450 family 26 subfamily B member 1 protein-coding 191762-7 chr2 226068674 226069847 + 263.53 NA Intergenic Intergenic -73534 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 179201 chr10 83717988 83719253 + 263.53 NA Intergenic L1HS|LINE|L1 -41531 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 177268-2 chr20 13500602 13501529 + 263.53 NA intron (NR_136631, intron 10 of 13) L1MEg|LINE|L1 137867 NM_017714 55617 Hs.348297 NM_017714 ENSG00000089123 TASP1 C20orf13|dJ585I14.2 taspase 1 protein-coding 225670 chr18 1044087 1045744 + 263.53 NA Intergenic L1PB1|LINE|L1 -116922 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 221190 chr10 67122013 67123307 + 263.53 NA intron (NM_001127384, intron 7 of 17) intron (NM_001127384, intron 7 of 17) 110394 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 231819-3 chr8 136132507 136133974 + 263.53 NA Intergenic LTR33|LTR|ERVL -397558 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 185086 chr11 73025285 73026422 + 263.53 NA intron (NM_014824, intron 3 of 19) intron (NM_014824, intron 3 of 19) 116465 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding 256766-5 chr8 126124017 126125617 + 263.53 NA Intergenic Intergenic -173620 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 190357 chr1 40330142 40331264 + 263.53 NA Intergenic Intergenic -13417 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding 191059 chr15 24632730 24633940 + 263.53 NA Intergenic LTR10B|LTR|ERV1 -42059 NM_018958 23742 Hs.649663 NM_018958 ENSG00000185823 NPAP1 C15orf2 nuclear pore associated protein 1 protein-coding 200634-4 chr3 44724015 44725371 + 263.53 NA TTS (NM_001134442) TTS (NM_001134442) -4913 NM_145044 115560 Hs.401045 NM_145044 ENSG00000186446 ZNF501 ZNF|ZNF52 zinc finger protein 501 protein-coding 226987-3 chr8 136217709 136219029 + 263.53 NA Intergenic Intergenic -312429 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 184735-4 chr3 89785579 89786694 + 263.53 NA Intergenic L2c|LINE|L2 678515 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 212054-4 chr20 42412241 42413731 + 263.53 NA intron (NM_133170, intron 9 of 31) L1ME1|LINE|L1 -272497 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 221629 chr10 39271782 39273145 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 575867 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 215216 chr1 56148358 56149369 + 263.53 NA Intergenic Intergenic 203776 NR_147161 105378738 Hs.121473 NR_147161 ENSG00000233079 LINC01755 - long intergenic non-protein coding RNA 1755 ncRNA 193607-9 chr5 66938224 66939804 + 263.53 NA intron (NM_015183, intron 3 of 27) L1MEg|LINE|L1 -20059 NM_001290226 375449 Hs.595458 NM_015183 ENSG00000069020 MAST4 - microtubule associated serine/threonine kinase family member 4 protein-coding 196418-4 chr21 30938241 30939786 + 263.53 NA Intergenic Intergenic -57433 NM_175858 337880 Hs.407654 NM_175858 ENSG00000182591 KRTAP11-1 HACL-1|HACL1|KAP11.1 keratin associated protein 11-1 protein-coding 179815-2 chr1 211074185 211075182 + 263.53 NA intron (NM_002238, intron 5 of 10) MLT2C1|LTR|ERVL 58691 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA 192114-2 chr14 47810650 47811822 + 263.53 NA Intergenic L1MA3|LINE|L1 -16222 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 191323-2 chr19 37718270 37719646 + 263.53 NA intron (NM_032689, intron 1 of 4) MER31A|LTR|ERV1 230 NM_001172677 84775 Hs.116622 NM_032689 ENSG00000198182 ZNF607 - zinc finger protein 607 protein-coding 202391-4 chr16 60160151 60161385 + 263.53 NA Intergenic Intergenic 199025 NM_001282301 729159 NM_001282301 NPAP1L - nuclear pore associated protein 1 like protein-coding 207223-2 chr14 82284275 82285597 + 263.53 NA Intergenic Intergenic -357696 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 179376-2 chr13 36636994 36638118 + 263.53 NA Intergenic MSTA-int|LTR|ERVL-MaLR -36464 NM_203451 400120 Hs.422375 NM_203451 ENSG00000180440 SERTM1 C13orf36 serine rich and transmembrane domain containing 1 protein-coding 204148 chr11 54778551 54779727 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 72307 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 240515-2 chr15 24640126 24641959 + 263.53 NA Intergenic Intergenic -34352 NM_018958 23742 Hs.649663 NM_018958 ENSG00000185823 NPAP1 C15orf2 nuclear pore associated protein 1 protein-coding 187107 chr2 110896259 110897527 + 263.53 NA intron (NM_001371254, intron 10 of 18) L1MDa|LINE|L1 164320 NM_001142807 55289 Hs.253320 NM_018308 ENSG00000153093 ACOXL - acyl-CoA oxidase like protein-coding 228481-3 chr5 141368407 141369782 + 263.53 NA intron (NM_018918, intron 1 of 3) intron (NM_018918, intron 1 of 3) -1148 NM_018924 56102 Hs.368160 NM_018924 ENSG00000262209 PCDHGB3 PCDH-GAMMA-B3 protocadherin gamma subfamily B, 3 protein-coding 201601-2 chr2 137783432 137784937 + 263.53 NA Intergenic HERV35I-int|LTR|ERV1 143748 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA 213460 chr2 99231950 99233072 + 263.53 NA Intergenic L1PA15-16|LINE|L1 22596 NM_175735 254773 Hs.436468 NM_175735 ENSG00000185674 LYG2 LYGH|LYSG2 lysozyme g2 protein-coding 197911-2 chr10 37789240 37790610 + 263.53 NA intron (NR_147992, intron 6 of 8) intron (NR_147992, intron 6 of 8) 5250 NR_051997 100419868 Hs.741719 NR_051997 ZNF33BP1 - zinc finger protein 33B pseudogene 1 pseudo 216095-6 chr5 46076396 46077601 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -380618 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 178322-7 chr5 35564203 35565528 + 263.53 NA Intergenic L2a|LINE|L2 -52998 NM_024867 79925 Hs.298863 NM_024867 ENSG00000152582 SPEF2 CT122|KPL2 sperm flagellar 2 protein-coding 195627-2 chr17 434227 435104 + 263.53 NA Intergenic AluSx|SINE|Alu 11275 NM_182705 359845 Hs.345588 NM_182705 ENSG00000183688 RFLNB CFM1|FAM101B refilin B protein-coding 184559-9 chr6 40123334 40124346 + 263.53 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -189378 NM_001358529 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 188336-4 chr2 125912514 125913714 + 263.53 NA Intergenic Intergenic 204871 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 181660-2 chr19 8812091 8813577 + 263.53 NA intron (NM_001304350, intron 3 of 4) intron (NM_001304350, intron 3 of 4) 9229 NM_001304350 148156 Hs.349444 NM_144693 ENSG00000167785 ZNF558 - zinc finger protein 558 protein-coding 208101 chr10 32771761 32773237 + 263.53 NA intron (NM_001321115, intron 29 of 43) L1PBa|LINE|L1 128973 NR_132768 106633814 NR_132768 SNORA86 - small nucleolar RNA, H/ACA box 86 snoRNA 263794-3 chr8 112513141 112514824 + 263.53 NA intron (NM_001363185, intron 26 of 66) intron (NM_001363185, intron 26 of 66) -129511 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 183944-5 chr17 73620381 73621574 + 263.53 NA intron (NM_001144952, intron 1 of 44) L1MB5|LINE|L1 23468 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 179288-3 chr8 43811905 43812787 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 519904 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 183944 chr1 207384202 207385110 + 263.53 NA Intergenic Intergenic 62978 NM_001300903 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding 303411 chr1 237611284 237613130 + 263.53 NA intron (NM_001035, intron 36 of 104) L1MB8|LINE|L1 141088 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 210736 chr14 56722167 56723446 + 263.53 NA Intergenic L4_C_Mam|LINE|RTE-X 82861 NM_001270525 5015 Hs.288655 NM_021728 ENSG00000165588 OTX2 CPHD6|MCOPS5 orthodenticle homeobox 2 protein-coding 184823 chr18 4112980 4114022 + 263.53 NA intron (NM_001242761, intron 2 of 11) L1PA16|LINE|L1 -151101 NR_036489 284215 Hs.647594 NR_036489 ENSG00000261520 DLGAP1-AS5 - DLGAP1 antisense RNA 5 ncRNA 181484-2 chr14 80075539 80076588 + 263.53 NA Intergenic L2a|LINE|L2 -135356 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA 205817-5 chr7 89247886 89248988 + 263.53 NA intron (NM_181646, intron 2 of 3) L1PA16|LINE|L1 -452700 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding 195539-8 chr7 62765042 62766223 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 538424 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 178146-10 chr3 35096479 35097469 + 263.53 NA intron (NR_110817, intron 2 of 3) L1M1|LINE|L1 297049 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 187370-3 chr14 45585561 45586842 + 263.53 NA Intergenic L1M2|LINE|L1 129401 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 189215-8 chr7 94836118 94837245 + 263.53 NA Intergenic L1M4c|LINE|L1 -70913 NM_001166160 55607 Hs.21816 NM_017650 ENSG00000158528 PPP1R9A NRB1|NRBI|Neurabin-I protein phosphatase 1 regulatory subunit 9A protein-coding 179991 chr10 83736625 83737805 + 263.53 NA Intergenic Intergenic -60126 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 195188-4 chr3 87055227 87056507 + 263.53 NA Intergenic Intergenic -33413 NR_047469 100846978 Hs.570649 NR_047469 ENSG00000281392 LINC00506 - long intergenic non-protein coding RNA 506 ncRNA 187194-2 chr18 2176293 2177605 + 263.53 NA Intergenic AluSx|SINE|Alu 394556 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 223825-2 chr2 63629263 63630492 + 263.53 NA Intergenic L1MDa|LINE|L1 40726 NM_001199112 4190 Hs.526521 NM_005917 ENSG00000014641 MDH1 HEL-S-32|MDH-s|MDHA|MGC:1375|MOR2 malate dehydrogenase 1 protein-coding 244995-3 chr5 45974843 45976505 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -279294 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 178849-4 chr18 3978403 3979456 + 263.53 NA intron (NR_102696, intron 1 of 4) intron (NR_102696, intron 1 of 4) 16576 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA 179552-2 chr14 59807430 59808506 + 263.53 NA intron (NM_021136, intron 1 of 8) LTR24B|LTR|ERV1 62808 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding 180343-2 chr5 169239569 169240622 + 263.53 NA intron (NM_003062, intron 3 of 35) L1MC3|LINE|L1 23599 NR_030311 693170 NR_030311 ENSG00000207619 MIR585 MIRN585|hsa-mir-585|mir-585 microRNA 585 ncRNA 192465-2 chr17 26836872 26838164 + 263.53 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat 251723 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 183593-8 chr5 80307696 80308950 + 263.53 NA Intergenic L1MC4a|LINE|L1 -7845 NR_004845 644936 Hs.627173 NR_004845 LOC644936 - actin beta pseudogene pseudo 185086-6 chr5 44162071 44163533 + 263.53 NA Intergenic Intergenic -225930 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 177795 chr11 54898487 54899662 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 192242 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 182012-3 chr15 25077116 25078318 + 263.53 NA TTS (NR_003327) TTS (NR_003327) 667 NR_003327 100033424 NR_003327 ENSG00000207197 SNORD116-12 HBII-85-12 small nucleolar RNA, C/D box 116-12 snoRNA 253516 chr19 24344922 24346297 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -182162 NR_003603 100101266 Hs.149312 NR_003603 ENSG00000268442 HAVCR1P1 - hepatitis A virus cellular receptor 1 pseudogene 1 pseudo 184910-4 chr2 236553724 236554745 + 263.53 NA Intergenic Intergenic -15591 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding 194485-2 chr18 77237279 77238604 + 263.53 NA Intergenic AluY|SINE|Alu -11907 NM_001480 2587 Hs.272191 NM_001480 ENSG00000166573 GALR1 GALNR|GALNR1 galanin receptor 1 protein-coding 178849-2 chr12 113655696 113656761 + 263.53 NA Intergenic L1ME4c|LINE|L1 117455 NR_110025 100506465 Hs.211461 NR_110025 ENSG00000249550 LINC01234 LCAL84|onco-lncRNA-32 long intergenic non-protein coding RNA 1234 ncRNA 206783-7 chr2 24546154 24547542 + 263.53 NA intron (NM_001362952, intron 1 of 23) MLT1H1|LTR|ERVL-MaLR -37629 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 179376-7 chr3 122144116 122145180 + 263.53 NA Intergenic L4_A_Mam|LINE|RTE-X -39020 NM_000388 846 Hs.435615 NM_000388 ENSG00000036828 CASR CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1|hCasR calcium sensing receptor protein-coding 193695 chr10 76535531 76536569 + 263.53 NA intron (NM_001305581, intron 6 of 6) AluSq2|SINE|Alu -351994 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 208540 chr15 86597592 86598964 + 263.53 NA intron (NM_152336, intron 22 of 24) MER89-int|LTR|ERV1 -281310 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA 179815-4 chr19 52152789 52154004 + 263.53 NA TTS (NM_001102657) TTS (NM_001102657) -13458 NM_178523 90317 Hs.645225 NM_178523 ENSG00000204611 ZNF616 - zinc finger protein 616 protein-coding 181309-6 chr18 13766420 13767581 + 263.53 NA Intergenic L1PA15|LINE|L1 40327 NM_001308263 8731 Hs.592347 NM_003799 ENSG00000101654 RNMT CMT1|CMT1c|MET|Met|RG7MT1|cm1p|hCMT1|hMet RNA guanine-7 methyltransferase protein-coding 195276-3 chr5 46225014 46226548 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -529401 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 185701-3 chr2 11910968 11912185 + 263.53 NA Intergenic ERVL-B4-int|LTR|ERVL -74590 NR_036226 100422996 NR_036226 ENSG00000265172 MIR4262 - microRNA 4262 ncRNA 231292-5 chr7 29028813 29030189 + 263.53 NA intron (NM_001371256, intron 16 of 16) L1MA4|LINE|L1 49534 NR_038965 100506497 Hs.586328 NR_038965 ENSG00000272568 LOC100506497 - uncharacterized LOC100506497 ncRNA 197121 chr11 100021882 100023039 + 263.53 NA intron (NM_001243270, intron 8 of 23) L1ME1|LINE|L1 466315 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 187282-3 chr2 79403139 79404556 + 263.53 NA Intergenic L1M4|LINE|L1 96997 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 224264-2 chr3 90574853 90576378 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 1467994 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 184559-8 chr6 19505621 19507006 + 263.53 NA Intergenic L1PA13|LINE|L1 56492 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA 179376-10 chr6 39173537 39174626 + 263.53 NA Intergenic Tigger2a|DNA|TcMar-Tigger 55394 NM_003740 8645 Hs.444448 NM_003740 ENSG00000164626 KCNK5 K2p5.1|KCNK5b|TASK-2|TASK2 potassium two pore domain channel subfamily K member 5 protein-coding 183154-2 chr6 159371535 159372503 + 263.53 NA Intergenic Intergenic -11512 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA 193870-4 chr7 15583256 15584414 + 263.53 NA Intergenic L1MEc|LINE|L1 -21820 NM_001004320 392636 Hs.670634 NM_001004320 ENSG00000187546 AGMO TMEM195 alkylglycerol monooxygenase protein-coding 178937-7 chrUn_GL000216v2 155473 156598 + 263.53 NA NA BSR/Beta|Satellite|Satellite NA NA 213899-4 chr2 75127599 75128712 + 263.53 NA intron (NM_015727, intron 1 of 3) intron (NM_015727, intron 1 of 3) 37343 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA 209594-3 chr11 40906777 40908303 + 263.53 NA intron (NM_020929, intron 1 of 4) intron (NM_020929, intron 1 of 4) 552096 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 181748-2 chr11 82493405 82494369 + 263.53 NA Intergenic MER57B1|LTR|ERV1 -89974 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA 199317-2 chr11 55057245 55058712 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -204177 NM_024114 79097 Hs.195715 NM_024114 ENSG00000150244 TRIM48 RNF101 tripartite motif containing 48 protein-coding 180694-3 chr12 18783194 18784199 + 263.53 NA Intergenic L1M1|LINE|L1 45577 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding 194485-3 chr21 29783085 29784317 + 263.53 NA intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) 35526 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA 184471-6 chr5 96198564 96199891 + 263.53 NA intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) 120089 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA 222859-4 chr14 76685501 76686937 + 263.53 NA Intergenic Intergenic -75249 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 180430-2 chr11 50664094 50665242 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 255521 NR_024504 646813 Hs.684179 NR_024504 LOC646813 - DExH-box helicase 9 pseudogene pseudo 200810-3 chr8 134355701 134356969 + 263.53 NA Intergenic THE1B|LTR|ERVL-MaLR -241736 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 181572-2 chr14 62496964 62498235 + 263.53 NA Intergenic THE1D-int|LTR|ERVL-MaLR -357626 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 207574-4 chr5 92472887 92474102 + 263.53 NA Intergenic MSTA1-int|LTR|ERVL-MaLR -1090177 NR_138072 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 193607-7 chr2 79179579 79180685 + 263.53 NA Intergenic MSTB1|LTR|ERVL-MaLR -20379 NM_002580 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 183066-3 chr21 15113270 15114668 + 263.53 NA Intergenic Intergenic -48969 NM_003489 8204 Hs.155017 NM_003489 ENSG00000180530 NRIP1 CAKUT3|RIP140 nuclear receptor interacting protein 1 protein-coding 243853-2 chr16 79719918 79721510 + 263.53 NA TTS (NR_104663) TTS (NR_104663) -49757 NR_104660 101928248 Hs.659802 NR_104660 ENSG00000260876 LINC01229 - long intergenic non-protein coding RNA 1229 ncRNA 193607-3 chr10 66418789 66419896 + 263.53 NA intron (NM_001127384, intron 11 of 17) L1MA4A|LINE|L1 -506694 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 183856-4 chr20 6211475 6212522 + 263.53 NA Intergenic L1P4|LINE|L1 -88454 NM_017671 55612 Hs.472054 NM_017671 ENSG00000101311 FERMT1 C20orf42|DTGCU2|KIND1|UNC112A|URP1 fermitin family member 1 protein-coding 212757 chr10 97950576 97951849 + 263.53 NA intron (NM_001206528, intron 2 of 14) intron (NM_001206528, intron 2 of 14) -75315 NR_162124 113839520 NR_162124 MIR3085 - microRNA 3085 ncRNA 183944-4 chr13 32985621 32986916 + 263.53 NA Intergenic Tigger17a|DNA|TcMar-Tigger -30155 NM_004795 9365 Hs.524953 NM_004795 ENSG00000133116 KL HFTC3 klotho protein-coding 223034-3 chr2 17993417 17994492 + 263.53 NA Intergenic THE1D-int|LTR|ERVL-MaLR 115287 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding 200722-5 chr5 10092044 10093088 + 263.53 NA Intergenic MER58A|DNA|hAT-Charlie 157322 NM_199133 134145 Hs.481569 NM_199133 ENSG00000150756 ATPSCKMT FAM173B|JS-2|hFAM173B ATP synthase c subunit lysine N-methyltransferase protein-coding 181924-2 chr10 44216220 44217383 + 263.53 NA Intergenic L1MEg|LINE|L1 -75949 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding 196330-3 chr8 84491090 84492297 + 263.53 NA intron (NM_001354308, intron 2 of 9) intron (NM_001354308, intron 2 of 9) 76209 NM_001354308 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 191411-2 chr12 42954253 42955588 + 263.53 NA Intergenic L4_A_Mam|LINE|RTE-X -200395 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA 189654-3 chr8 141975817 141977229 + 263.53 NA Intergenic Intergenic -190210 NR_031636 100302147 NR_031636 ENSG00000221768 MIR1302-7 MIRN1302-7|hsa-mir-1302-7 microRNA 1302-7 ncRNA 192465-7 chr4 132695432 132696440 + 263.53 NA Intergenic L1MB7|LINE|L1 104847 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA 231292-3 chr5 72777707 72779354 + 263.53 NA Intergenic L1MA4|LINE|L1 -38061 NM_002270 3842 Hs.482497 NM_002270 ENSG00000083312 TNPO1 IPO2|KPNB2|MIP|MIP1|TRN transportin 1 protein-coding 184295-8 chr8 128153702 128154880 + 263.53 NA Intergenic Intergenic 4175 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 202040 chr10 64797103 64798543 + 263.53 NA Intergenic AluJo|SINE|Alu -27705 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 214162-3 chr5 7154790 7156047 + 263.53 NA Intergenic L1PA15-16|LINE|L1 113936 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 255624 chr19 31931303 31932953 + 263.53 NA Intergenic L1ME3A|LINE|L1 -93734 NR_110674 100996665 Hs.443685 NR_110673 ENSG00000267779 LINC01533 CTC-360P9.3 long intergenic non-protein coding RNA 1533 ncRNA 187194-3 chr4 41688938 41690177 + 263.53 NA exon (NM_001330792, exon 23 of 25) exon (NM_001330792, exon 23 of 25) 59413 NM_003924 8929 Hs.87202 NM_003924 ENSG00000109132 PHOX2B CCHS|NBLST2|NBPhox|PMX2B paired like homeobox 2B protein-coding 193695-11 chr7 62838753 62839986 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 464687 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 180255 chr1 110739925 110741154 + 263.53 NA Intergenic Intergenic -65599 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding 270294-5 chr8 112414006 112415795 + 263.53 NA intron (NM_052900, intron 31 of 68) THE1D-int|LTR|ERVL-MaLR -228593 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 187897-2 chr19 36753971 36754911 + 263.53 NA intron (NM_001267779, intron 3 of 3) L1MEd|LINE|L1 18366 NM_001193552 342892 Hs.406307 NM_001193552 ENSG00000267041 ZNF850 ZNF850P zinc finger protein 850 protein-coding 193256 chr14 63073630 63074720 + 263.53 NA Intergenic MER77|LTR|ERVL -28717 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 193256-2 chr2 107378317 107379419 + 263.53 NA Intergenic Intergenic -29343 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA 206783-8 chr2 212445837 212447125 + 263.53 NA intron (NM_001042599, intron 1 of 26) MLT2A1|LTR|ERVL -20121 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA 232961-3 chr14 52396032 52397370 + 263.53 NA Intergenic L1PA17|LINE|L1 82389 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding 209067 chr11 78995115 78996471 + 263.53 NA intron (NM_001098816, intron 6 of 33) MIRb|SINE|MIR 406316 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA 190708-10 chr8 131617190 131618340 + 263.53 NA Intergenic L1MC3|LINE|L1 -286328 NM_001323558 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 234191 chr11 83404200 83405736 + 263.53 NA Intergenic THE1D|LTR|ERVL-MaLR -118561 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 191147-4 chr20 45605689 45606880 + 263.53 NA Intergenic L1MA9|LINE|L1 -23455 NM_080753 140832 Hs.199380 NM_080753 ENSG00000180305 WFDC10A C20orf146|WAP10|dJ688G8.3 WAP four-disulfide core domain 10A protein-coding 183768-3 chr20 31065149 31066269 + 263.53 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -191955 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 191938-3 chr2 37790829 37791939 + 263.53 NA Intergenic HAL1|LINE|L1 38327 NR_110011 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA 192026 chr10 42394726 42395934 + 263.53 NA Intergenic Intergenic -27285 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 179113-5 chr5 141298307 141299386 + 263.53 NA Intergenic Intergenic 5203 NM_031947 83884 Hs.97647 NM_031947 ENSG00000120329 SLC25A2 ORC2|ORNT2 solute carrier family 25 member 2 protein-coding 196154-4 chr22 45851533 45852780 + 263.53 NA Intergenic MLT1B|LTR|ERVL-MaLR 91632 NR_039919 100616253 NR_039919 ENSG00000264160 MIR4762 - microRNA 4762 ncRNA 205114-3 chr5 46347383 46348734 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr -651678 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 189566-3 chr3 150484143 150485183 + 263.53 NA Intergenic L1MB1|LINE|L1 61833 NM_014445 27230 Hs.518326 NM_014445 ENSG00000120742 SERP1 RAMP4 stress associated endoplasmic reticulum protein 1 protein-coding 186404-7 chr8 131115878 131116918 + 263.53 NA Intergenic L1MA1|LINE|L1 -75489 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 193783-2 chr5 2877908 2879356 + 263.53 NA Intergenic Intergenic -39222 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA 194310 chr1 218966966 218968093 + 263.53 NA intron (NR_031644, intron 6 of 6) MLT1H|LTR|ERVL-MaLR -49018 NR_146917 105372925 Hs.666318 NR_146917 LINC01710 - long intergenic non-protein coding RNA 1710 ncRNA 195364-5 chr8 134938172 134939349 + 263.53 NA Intergenic Intergenic 88825 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 178937-6 chr8 128530940 128532401 + 263.53 NA intron (NR_121672, intron 2 of 7) intron (NR_121672, intron 2 of 7) 33009 NR_121673 101927774 Hs.628730 NR_121672 LINC00824 LINC01263 long intergenic non-protein coding RNA 824 ncRNA 235420-5 chr9 112952671 112954129 + 263.53 NA Intergenic L1MEc|LINE|L1 58792 NM_001101338 169834 Hs.192877 NM_001101338 ENSG00000285447 ZNF883 - zinc finger protein 883 protein-coding 203797-4 chr9 28238800 28239906 + 263.53 NA intron (NM_152570, intron 5 of 6) L1M1|LINE|L1 479952 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 177971-2 chr15 100805588 100806565 + 263.53 NA Intergenic L1MD|LINE|L1 -43676 NR_160702 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA 205114 chr1 238277671 238278877 + 263.53 NA Intergenic L1MCa|LINE|L1 207743 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 185525-5 chr3 157827100 157828139 + 263.53 NA Intergenic Intergenic 278544 NM_003030 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding 213108-2 chr2 79837869 79839191 + 263.53 NA intron (NM_001282598, intron 3 of 17) intron (NM_001282598, intron 3 of 17) 28053 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA 195012-4 chr2 30856191 30857181 + 263.53 NA Intergenic L1MA3|LINE|L1 -49240 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding 235157-3 chr2 10939097 10940397 + 263.53 NA Intergenic Intergenic 27813 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding 179025-5 chr5 30884660 30885623 + 263.53 NA Intergenic MIR3|SINE|MIR -308545 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 246664-2 chr11 54791722 54793164 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 85611 NM_001005272 81318 Hs.554531 NM_001005272 ENSG00000221840 OR4A5 OR11-111 olfactory receptor family 4 subfamily A member 5 protein-coding 211527-6 chr8 43595512 43597120 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 303874 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 184647-3 chr5 58379520 58380592 + 263.53 NA Intergenic MER41-int|LTR|ERV1 80030 NM_006622 10769 Hs.398157 NM_006622 ENSG00000145632 PLK2 SNK|hPlk2|hSNK polo like kinase 2 protein-coding 177356-2 chr12 59251514 59252405 + 263.53 NA Intergenic Charlie2b|DNA|hAT-Charlie -331421 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding 290323 chr10 43484634 43486370 + 263.53 NA Intergenic Intergenic 48391 NM_001355450 642819 Hs.719657 NM_001355444 ENSG00000243660 ZNF487 KRBO1|ZNF487P zinc finger protein 487 protein-coding 215041-2 chr15 100148969 100150251 + 263.53 NA intron (NM_139057, intron 10 of 21) LTR10A|LTR|ERV1 192365 NM_139057 170691 Hs.513200 NM_139057 ENSG00000140470 ADAMTS17 WMS4 ADAM metallopeptidase with thrombospondin type 1 motif 17 protein-coding 192026-4 chr2 197858665 197859954 + 263.53 NA intron (NM_006226, intron 1 of 5) intron (NM_006226, intron 1 of 5) 54716 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding 200722-3 chr18 2268139 2269644 + 263.53 NA Intergenic Intergenic 302614 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 199756-3 chr8 29903892 29905145 + 263.53 NA Intergenic L1ME4c|LINE|L1 -16995 NR_024473 286135 Hs.376840 NR_024473 ENSG00000253279 LINC02209 FAM183CP long intergenic non-protein coding RNA 2209 ncRNA 180957-5 chr5 158034472 158035423 + 263.53 NA Intergenic THE1D-int|LTR|ERVL-MaLR -175802 NM_001195555 9685 Hs.644000 NM_014666 ENSG00000113282 CLINT1 CLINT|ENTH|EPN4|EPNR clathrin interactor 1 protein-coding 181836 chr17 57688559 57689677 + 263.53 NA Intergenic Intergenic 56181 NM_001282544 101927581 Hs.540784 NM_001282544 ENSG00000166329 CCDC182 - coiled-coil domain containing 182 protein-coding 217676-2 chr2 89795493 89796786 + 263.53 NA Intergenic Intergenic -158232 NR_136329 101927050 Hs.578075 NR_136329 LOC101927050 - lysine methyltransferase 2C pseudogene pseudo 177268-8 chr8 122429247 122430172 + 263.53 NA intron (NR_131202, intron 2 of 3) L1PA16|LINE|L1 138935 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 196067-2 chr7 65487159 65488511 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 67230 NR_157837 101929322 NR_157837 LOC101929322 - integrator complex subunit 4 pseudogene pseudo 190445-2 chr3 76468175 76469460 + 263.53 NA Intergenic Intergenic -571282 NM_001290039 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding 180694-8 chr20 59693585 59694783 + 263.53 NA intron (NM_001199506, intron 1 of 12) intron (NM_001199506, intron 1 of 12) 17523 NM_001199506 116154 Hs.473218 NM_080672 ENSG00000087495 PHACTR3 C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ phosphatase and actin regulator 3 protein-coding 202830-6 chr20 45696703 45697849 + 263.53 NA intron (NM_172006, intron 2 of 3) L1MB5|LINE|L1 -4762 NM_172005 164237 Hs.406733 NM_172005 ENSG00000168634 WFDC13 C20orf138|WAP13|dJ601O1.3 WAP four-disulfide core domain 13 protein-coding 182187-4 chr14 58932417 58933494 + 263.53 NA intron (NR_110547, intron 3 of 5) L1M2a|LINE|L1 104667 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA 198790-2 chr8 139138840 139140204 + 263.53 NA Intergenic Intergenic -225481 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 228305-2 chr7 62627577 62629072 + 263.53 NA Intergenic ALR/Alpha|Satellite|centr 675732 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 207838 chr2 32974283 32975361 + 263.53 NA intron (NM_206943, intron 2 of 33) L1PA15|LINE|L1 27869 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding 183944-13 chr8 134300335 134301533 + 175.687 NA Intergenic Intergenic -297137 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 178322-5 chr4 31816607 31817833 + 175.687 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -180159 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 177620 chr1 209474397 209475622 + 175.687 NA Intergenic Intergenic 42876 NR_029622 406988 NR_029622 ENSG00000284485 MIR205 MIRN205|mir-205 microRNA 205 ncRNA 209507-2 chr8 83647919 83649512 + 175.687 NA Intergenic L1ME2|LINE|L1 244957 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 181133-4 chr2 34198980 34200546 + 175.687 NA intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 132537 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA