PeakID (cmd=annotatePeaks.pl S20_S20_SEACR.relaxed.bed hg38 -annStats S20_S20_SEACR.relaxed.log) Chr Start End Strand Peak Score Focus Ratio/Region Size Annotation Detailed Annotation Distance to TSS Nearest PromoterID Entrez ID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description Gene Type chr9 102650146 102650530 192 - chr9:102650243-102650419 NA NA NA NA NA chr8 50061681 50062039 221 - chr8:50061866-50062010 NA NA NA NA NA chr8-4 130979606 130979951 195 - chr8:130979788-130979821 NA NA NA NA NA chr8-3 119073865 119074277 169 - chr8:119073910-119073998 NA NA NA NA NA chr8-2 104739220 104739630 158 - chr8:104739383-104739520 NA NA NA NA NA chr6 97810091 97810567 253 - chr6:97810384-97810443 NA NA NA NA NA chr6-2 116568856 116569089 178 - chr6:116568891-116568989 NA NA NA NA NA chr5 23259706 23259955 152 - chr5:23259886-23259906 NA NA NA NA NA chr5-2 109082412 109082826 284 - chr5:109082669-109082767 NA NA NA NA NA chr4 28369338 28369722 173 - chr4:28369624-28369631 NA NA NA NA NA chr3-3 95957180 95957630 286 - chr3:95957533-95957628 NA NA NA NA NA chr3-2 61287260 61287754 206 - chr3:61287438-61287446 NA NA NA NA NA chr3 44070332 44070623 162 - chr3:44070441-44070462 NA NA NA NA NA chr3-5 179125653 179126132 255 - chr3:179125739-179125857 NA NA NA NA NA chr3-4 107830396 107830598 169 - chr3:107830414-107830515 NA NA NA NA NA chr21-2 40357741 40358010 209 - chr21:40357887-40358000 NA NA NA NA NA chr21 36124469 36124760 175 - chr21:36124561-36124590 NA NA NA NA NA chr1 32983203 32983397 154 - chr1:32983273-32983366 NA NA NA NA NA chr1-3 111522897 111523134 152 - chr1:111522974-111523017 NA NA NA NA NA chr1-2 105895196 105895464 186 - chr1:105895236-105895346 NA NA NA NA NA chr18-2 69710297 69710635 206 - chr18:69710423-69710475 NA NA NA NA NA chr18 5544613 5545011 278 - chr18:5544915-5545001 NA NA NA NA NA chr17_KI270729v1_random 2765 3407 298 - chr17_KI270729v1_random:2857-3028 NA NA NA NA NA chr15-2 96924692 96925025 221 - chr15:96924867-96924941 NA NA NA NA NA chr15 58653479 58653770 211 - chr15:58653641-58653724 NA NA NA NA NA chr14-4 86021827 86022307 207 - chr14:86022058-86022078 NA NA NA NA NA chr14-3 73027962 73028274 193 - chr14:73028103-73028159 NA NA NA NA NA chr14-2 67041108 67041352 204 - chr14:67041179-67041319 NA NA NA NA NA chr14 65276744 65277120 227 - chr14:65276977-65277043 NA NA NA NA NA chr12-3 85857843 85858069 183 - chr12:85857851-85857996 NA NA NA NA NA chr12-2 71719291 71719592 200 - chr12:71719410-71719551 NA NA NA NA NA chr12 48513722 48513955 187 - chr12:48513778-48513925 NA NA NA NA NA chr11 123421501 123421963 232 - chr11:123421759-123421887 NA NA NA NA NA chr10-2 51433422 51433715 189 - chr10:51433584-51433637 NA NA NA NA NA chr10 16031599 16031857 236 - chr10:16031606-16031811 NA NA NA NA NA 287.461 chr12 14555529 14555711 + 2.07692 NA intron (NM_024829, intron 1 of 10) L2c|LINE|L2 -12112 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA 284.923 chr17_KI270729v1_random 27488 27887 + 2.07692 NA NA (GAATG)n|Satellite|Satellite NA NA 213.846 chr17_KI270729v1_random 3449 3692 + 2 NA NA (TTCCA)n|Simple_repeat|Simple_repeat NA NA 380.923 chr10 44218449 44218747 + 2 NA Intergenic L1M2|LINE|L1 -74152 NM_001258000 100130539 Hs.694626 NM_001258000 ENSG00000277288 C10orf142 - chromosome 10 open reading frame 142 protein-coding 347.616 chr14 85012428 85012772 + 1.92308 NA Intergenic Intergenic -259332 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 204.461-3 chr8 137441279 137441433 + 1.84615 NA Intergenic Intergenic -27768 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 219.077-2 chr8 81290185 81290347 + 1.84615 NA Intergenic Intergenic 9730 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding 197.077-5 chr2 144133936 144134138 + 1.84615 NA intron (NM_001354350, intron 6 of 14) intron (NM_001354350, intron 6 of 14) 77542 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding 408.923 chr7 39162452 39162817 + 1.84615 NA intron (NM_001370959, intron 2 of 9) MER103C|DNA|hAT-Charlie -149067 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA 316.846 chr17 61466132 61466353 + 1.76923 NA intron (NM_001321120, intron 4 of 8) intron (NM_001321120, intron 4 of 8) 9754 NM_018488 9496 Hs.143907 NM_018488 ENSG00000121075 TBX4 ICPPS|SPS T-box transcription factor 4 protein-coding 246.615 chr4 81263875 81264073 + 1.76923 NA Intergenic L1M5|LINE|L1 -48752 NM_001282485 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding 386.616 chr5 110642181 110642588 + 1.76923 NA intron (NM_001039763, intron 2 of 13) intron (NM_001039763, intron 2 of 13) 84287 NM_001039763 642987 Hs.729154 NM_001039763 ENSG00000186952 TMEM232 - transmembrane protein 232 protein-coding 367 chr1 237651456 237651870 + 1.76923 NA intron (NM_001035, intron 51 of 104) intron (NM_001035, intron 51 of 104) 180544 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 183.692 chr15 64512356 64512557 + 1.76923 NA intron (NM_015042, intron 1 of 8) Tigger19b|DNA|TcMar-Tigger 13036 NM_015042 23060 Hs.595451 NM_015042 ENSG00000180357 ZNF609 - zinc finger protein 609 protein-coding 305.231 chr5 105682557 105682875 + 1.76923 NA Intergenic Intergenic 583242 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 266.538 chr6 132648176 132648334 + 1.76923 NA Intergenic Intergenic -2229 NM_138327 134864 Hs.375030 NM_138327 ENSG00000146399 TAAR1 TA1|TAR1|TRAR1 trace amine associated receptor 1 protein-coding 278.923 chr17 73585696 73586017 + 1.76923 NA intron (NM_001144952, intron 1 of 44) MIR|SINE|MIR 58589 NM_001144952 54549 Hs.435719 NM_019064 ENSG00000069188 SDK2 - sidekick cell adhesion molecule 2 protein-coding 209.923 chr8 48655152 48655334 + 1.76923 NA intron (NR_105002, intron 2 of 3) intron (NR_105002, intron 2 of 3) 34840 NR_105004 101929217 Hs.547790 NR_105004 ENSG00000253455 LOC101929217 - uncharacterized LOC101929217 ncRNA 253.461 chr20 38507033 38507237 + 1.76923 NA intron (NM_001282917, intron 5 of 29) L1ME4a|LINE|L1 -9428 NR_039605 100616190 NR_039605 ENSG00000275453 MIR548O2 - microRNA 548o-2 ncRNA 372.538 chr5 49599431 49599996 + 1.76923 NA Intergenic BSR/Beta|Satellite|Satellite 841575 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding 206.692-2 chr7 27136042 27136180 + 1.76923 NA Intergenic Intergenic -4253 NR_038832 100133311 Hs.610216 NR_038831 ENSG00000254369 HOXA-AS3 HOXA6as HOXA cluster antisense RNA 3 ncRNA 303 chr1 62618392 62618668 + 1.76923 NA intron (NM_001367561, intron 14 of 49) MIRb|SINE|MIR 21010 NM_014495 27329 Hs.209153 NM_014495 ENSG00000132855 ANGPTL3 ANG-5|ANGPT5|ANL3|FHBL2 angiopoietin like 3 protein-coding 334.769 chr1 82284349 82284823 + 1.69231 NA Intergenic Intergenic 482133 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding 552.077 chr16 34587937 34588401 + 1.69231 NA Intergenic Intergenic -206689 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo 218.154 chr18 21105145 21105378 + 1.69231 NA intron (NM_005406, intron 1 of 32) intron (NM_005406, intron 1 of 32) 6552 NM_005406 6093 Hs.306307 NM_005406 ENSG00000067900 ROCK1 P160ROCK|ROCK-I Rho associated coiled-coil containing protein kinase 1 protein-coding 183.231-9 chr7 45357517 45357747 + 1.69231 NA Intergenic L1MC3|LINE|L1 199841 NM_005856 10268 Hs.25691 NM_005856 ENSG00000122679 RAMP3 - receptor activity modifying protein 3 protein-coding 264.846 chr14 53236419 53236642 + 1.69231 NA Intergenic Intergenic 83176 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA 294.001 chr15 63752669 63752885 + 1.69231 NA intron (NM_003922, intron 8 of 77) intron (NM_003922, intron 8 of 77) 81171 NM_003922 8925 Hs.210385 NM_003922 ENSG00000103657 HERC1 MDFPMR|p532|p619 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 protein-coding 223.231 chr3 127730422 127730652 + 1.69231 NA intron (NM_001003794, intron 3 of 7) intron (NM_001003794, intron 3 of 7) 57585 NM_172027 80325 Hs.107812 NM_032548 ENSG00000114626 ABTB1 BPOZ|BTB3|BTBD21|EF1ABP|PP2259 ankyrin repeat and BTB domain containing 1 protein-coding 161.692-10 chr8 108790559 108790669 + 1.69231 NA Intergenic Intergenic -3020 NM_153015 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding 192.923-6 chr7 9576581 9576808 + 1.69231 NA Intergenic Intergenic -57576 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo 417.539 chr8 76359145 76359549 + 1.69231 NA Intergenic L1MC5a|LINE|L1 -47307 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA 165.846 chr1 171580529 171580672 + 1.69231 NA intron (NM_015172, intron 28 of 33) MIR|SINE|MIR -39163 NM_001368164 110806290 NM_001368164 MYOCOS - myocilin opposite strand protein-coding 263.846-2 chr2 4195559 4195884 + 1.69231 NA Intergenic L1M5|LINE|L1 221560 NR_136322 105373394 Hs.742693 NR_136322 LOC105373394 - uncharacterized LOC105373394 ncRNA 283.846 chr2 118659670 118660021 + 1.69231 NA Intergenic Intergenic -56879 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA 318.538 chr7 17599396 17599717 + 1.61538 NA Intergenic MIR|SINE|MIR -40647 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA 204.154-2 chr5 66987856 66988201 + 1.61538 NA intron (NM_001290226, intron 1 of 26) intron (NM_001290226, intron 1 of 26) 16126 NR_111908 101928794 Hs.672435 NR_111908 MAST4-AS1 - MAST4 antisense RNA 1 ncRNA 238.153-2 chr9 38713781 38713972 + 1.61538 NA Intergenic Intergenic 92788 NR_027294 158228 Hs.632652 NR_027294 FAM201A C9orf122 family with sequence similarity 201 member A ncRNA 276.23 chr16 81798696 81798954 + 1.61538 NA intron (NM_002661, intron 2 of 32) intron (NM_002661, intron 2 of 32) 19534 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding 348.231 chr9 100163333 100163867 + 1.61538 NA intron (NR_134606, intron 3 of 16) L2a|LINE|L2 64357 NM_014425 27130 Hs.558477 NM_014425 ENSG00000119509 INVS INV|NPH2|NPHP2 inversin protein-coding 261.692 chr8 134903587 134903808 + 1.61538 NA Intergenic MIRb|SINE|MIR 53762 NR_125427 101927845 Hs.559609 NR_125427 ENSG00000251218 LOC101927845 - uncharacterized LOC101927845 ncRNA 207.538-2 chr1 150890886 150891133 + 1.61538 NA intron (NR_148929, intron 1 of 1) intron (NR_148929, intron 1 of 1) 3756 NR_148929 100996521 Hs.208452 NR_148929 CTXND2 - cortexin domain containing 2 ncRNA 335.999 chr15 43302955 43303199 + 1.61538 NA promoter-TSS (NM_052955) promoter-TSS (NM_052955) -822 NM_052955 116179 Hs.164661 NM_052955 ENSG00000159495 TGM7 TGMZ transglutaminase 7 protein-coding 271.923 chr9 26831040 26831327 + 1.61538 NA Intergenic HAL1M8|LINE|L1 61619 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 165.231-6 chr2 168297469 168297633 + 1.61538 NA Intergenic L1MC4|LINE|L1 -49956 NM_013233 27347 Hs.276271 NM_013233 ENSG00000198648 STK39 DCHT|PASK|SPAK serine/threonine kinase 39 protein-coding 356.999 chr5 11408512 11408931 + 1.61538 NA intron (NM_001288715, intron 4 of 20) intron (NM_001288715, intron 4 of 20) 180196 NM_001288715 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 225.692-7 chr3 62275209 62275449 + 1.61538 NA intron (NM_002841, intron 23 of 29) intron (NM_002841, intron 23 of 29) 43618 NR_038283 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA 206.769-3 chr20 44570646 44570826 + 1.61538 NA intron (NM_007066, intron 1 of 3) L2a|LINE|L2 -11843 NM_001281445 11142 Hs.472831 NM_007066 ENSG00000168734 PKIG PKI-gamma cAMP-dependent protein kinase inhibitor gamma protein-coding 232.846 chr8 43680040 43680253 + 1.61538 NA Intergenic ALR/Alpha|Satellite|centr 387704 NM_001002920 340441 Hs.531579 NM_001002920 ENSG00000188877 POTEA A26A1|CT104.3|POTE-8|POTE8 POTE ankyrin domain family member A protein-coding 261.153 chr21 30199992 30200250 + 1.61538 NA Intergenic Intergenic 11662 NR_038855 266919 Hs.561028 NR_038855 ENSG00000227342 LINC00307 D21S2091E|NCRNA00307 long intergenic non-protein coding RNA 307 ncRNA 471.001 chr8 80695145 80695857 + 1.61538 NA intron (NM_001033723, intron 2 of 8) intron (NM_001033723, intron 2 of 8) 178967 NM_001367783 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding 222.692 chr19 27861434 27861747 + 1.61538 NA intron (NR_146734, intron 1 of 7) HSAT4|Satellite|centr -67650 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA 260.23 chr16 34593407 34593638 + 1.61538 NA Intergenic Intergenic -212042 NR_158158 102724928 Hs.692710 NR_158158 CCNYL3 - cyclin Y like 3 (pseudogene) pseudo 301.385 chr6 150972817 150973165 + 1.61538 NA intron (NM_001350486, intron 20 of 27) intron (NM_001350486, intron 20 of 27) -34017 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding 329.538 chr15 47680621 47680905 + 1.61538 NA intron (NM_001198999, intron 4 of 19) L1MB1|LINE|L1 -36742 NM_001358351 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding 213.461-2 chr9 105298661 105298820 + 1.61538 NA intron (NM_001330731, intron 1 of 15) intron (NM_001330731, intron 1 of 15) 54089 NM_080546 23446 Hs.573495 NM_022109 ENSG00000070214 SLC44A1 CD92|CDW92|CHTL1|CTL1 solute carrier family 44 member 1 protein-coding 306.384 chr14 67126142 67126559 + 1.61538 NA intron (NM_001024218, intron 16 of 21) intron (NM_001024218, intron 16 of 21) -63090 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 159.769-7 chr4 33535629 33535789 + 1.53846 NA Intergenic Intergenic 504184 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 284.23 chr9 102213644 102214122 + 1.53846 NA Intergenic Intergenic -305754 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA 302.231 chr5 156184466 156184739 + 1.53846 NA Intergenic Intergenic -142155 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding 187.231-2 chr9 125895978 125896203 + 1.53846 NA intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 147907 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding 327.692 chr7 83141401 83141743 + 1.53846 NA intron (NM_033026, intron 2 of 24) intron (NM_033026, intron 2 of 24) 21312 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding 154.461-7 chr3 28813181 28813292 + 1.53846 NA Intergenic L1ME3|LINE|L1 237958 NR_038840 645206 Hs.376725 NR_038840 LINC00693 - long intergenic non-protein coding RNA 693 ncRNA 259.769 chr11 117870853 117871074 + 1.53846 NA intron (NM_001164836, intron 1 of 9) intron (NM_001164836, intron 1 of 9) 5695 NM_001204268 100533181 Hs.744850 NM_001204268 ENSG00000255245 FXYD6-FXYD2 FXYD6 FXYD6-FXYD2 readthrough protein-coding 249.615 chr12 14656058 14656367 + 1.53846 NA intron (NM_004963, intron 12 of 26) intron (NM_004963, intron 12 of 26) 40387 NM_004963 2984 Hs.524278 NM_004963 ENSG00000070019 GUCY2C DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR guanylate cyclase 2C protein-coding 217.154-2 chr12 81140092 81140350 + 1.53846 NA intron (NM_024560, intron 4 of 15) intron (NM_024560, intron 4 of 15) -18167 NR_039848 100616133 NR_039848 ENSG00000265227 MIR4699 - microRNA 4699 ncRNA 313.769 chr15 89937341 89937626 + 1.53846 NA Intergenic MLT1L|LTR|ERVL-MaLR -24531 NM_182616 348110 Hs.6734 NM_182616 ENSG00000242498 ARPIN C15orf38 actin related protein 2/3 complex inhibitor protein-coding 199.539 chr3 62968684 62968821 + 1.53846 NA Intergenic MLT1K|LTR|ERVL-MaLR -93336 NM_183394 8618 Hs.654933 NM_003716 ENSG00000163618 CADPS CADPS1|CAPS|CAPS1|UNC-31 calcium dependent secretion activator protein-coding 230.692-2 chr11 107073545 107073832 + 1.53846 NA Intergenic Intergenic -55212 NM_001256424 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding 176.616 chr2 101618156 101618372 + 1.53846 NA Intergenic Intergenic -79439 NM_145686 9448 Hs.701013 NM_004834 ENSG00000071054 MAP4K4 FLH21957|HEL-S-31|HGK|MEKKK4|NIK mitogen-activated protein kinase kinase kinase kinase 4 protein-coding 358.308 chr7 112261555 112261977 + 1.53846 NA intron (NM_021994, intron 1 of 11) intron (NM_021994, intron 1 of 11) 55071 NM_021994 11179 Hs.655904 NM_021994 ENSG00000198839 ZNF277 NRIF4|ZNF277P zinc finger protein 277 protein-coding 263.615 chr3 168690534 168690728 + 1.53846 NA intron (NR_021485, intron 5 of 15) intron (NR_021485, intron 5 of 15) 138777 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA 325 chr1 80263073 80263345 + 1.53846 NA Intergenic L1PA16|LINE|L1 -272546 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 261.538 chr12 116775968 116776318 + 1.53846 NA intron (NM_001109903, intron 6 of 11) intron (NM_001109903, intron 6 of 11) 37828 NM_032814 84900 Hs.437195 NM_032814 ENSG00000135119 RNFT2 TMEM118 ring finger protein, transmembrane 2 protein-coding 232.154-2 chr5 37853066 37853276 + 1.53846 NA intron (NR_103441, intron 1 of 3) intron (NR_103441, intron 1 of 3) 12733 NR_103441 100861519 Hs.536820 NM_001278094 GDNF-AS1 GDNFOS GDNF antisense RNA 1 ncRNA 234.154-2 chr14 26619131 26619422 + 1.53846 NA intron (NR_147061, intron 1 of 6) intron (NR_147061, intron 1 of 6) 20629 NR_147061 102725045 Hs.143441 NR_147061 LINC02588 C14orf22|NOVA1-AS1 long intergenic non-protein coding RNA 2588 ncRNA 208.231-2 chr1 121490061 121490257 + 1.53846 NA Intergenic MLT1N2|LTR|ERVL-MaLR -28953 NR_003955 647121 Hs.697682 NR_003955 ENSG00000231752 EMBP1 - embigin pseudogene 1 pseudo 174.923-7 chr3 116306270 116306485 + 1.53846 NA intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) -53647 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA 235.538 chr9 102398827 102399042 + 1.53846 NA Intergenic Tigger2|DNA|TcMar-Tigger -120703 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA 220.769-2 chr8 114699350 114699567 + 1.53846 NA Intergenic Intergenic 968555 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 308.538 chr17 70094462 70094879 + 1.53846 NA intron (NM_001270422, intron 1 of 5) intron (NM_001270422, intron 1 of 5) -10175 NM_170742 3773 Hs.463985 NM_018658 ENSG00000153822 KCNJ16 BIR9|KIR5.1 potassium voltage-gated channel subfamily J member 16 protein-coding 243.615 chr4 30906277 30906546 + 1.53846 NA intron (NM_032457, intron 1 of 2) MIR3|SINE|MIR 186042 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 385.231 chr20 41298881 41299503 + 1.53846 NA intron (NM_015035, intron 1 of 3) intron (NM_015035, intron 1 of 3) 928 NM_015035 23051 Hs.380133 NM_015035 ENSG00000174306 ZHX3 TIX1 zinc fingers and homeoboxes 3 protein-coding 250.154 chr3 135354019 135354330 + 1.53846 NA Intergenic L1ME1|LINE|L1 558914 NM_004441 2047 Hs.116092 NM_004441 ENSG00000154928 EPHB1 ELK|EPHT2|Hek6|NET EPH receptor B1 protein-coding 191.538-4 chr4 123858135 123858337 + 1.53846 NA intron (NR_027105, intron 4 of 5) intron (NR_027105, intron 4 of 5) 83972 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA 250.153 chr1 5057742 5058013 + 1.53846 NA Intergenic L1MB8|LINE|L1 403268 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding 189.154 chr14 22952740 22952886 + 1.53846 NA intron (NM_017815, intron 2 of 9) intron (NM_017815, intron 2 of 9) 4216 NR_039856 100616424 NR_039856 ENSG00000284118 MIR4707 mir-4707 microRNA 4707 ncRNA 232.769-3 chr5 16584764 16584986 + 1.53846 NA intron (NM_001034850, intron 1 of 8) intron (NM_001034850, intron 1 of 8) -31051 NR_109946 101929524 Hs.734029 NR_109946 ENSG00000246214 LOC101929524 - uncharacterized LOC101929524 ncRNA 191.231-6 chr8 103233255 103233400 + 1.53846 NA Intergenic L2b|LINE|L2 -61187 NR_109954 100499183 Hs.654812 NR_034092 ENSG00000247081 BAALC-AS1 FZD6-DT|lncFZD6 BAALC antisense RNA 1 ncRNA 1358.31 chr5 49657225 49660346 + 1.53846 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 782503 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding 161.077-9 chr4 121361616 121361803 + 1.53846 NA intron (NM_198179, intron 1 of 5) intron (NM_198179, intron 1 of 5) 19309 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding 202.154-7 chr3 141020323 141020508 + 1.53846 NA Intergenic Intergenic -30932 NM_080862 92369 Hs.655112 NM_080862 ENSG00000175093 SPSB4 SSB-4|SSB4 splA/ryanodine receptor domain and SOCS box containing 4 protein-coding 213.692-4 chr19 27672788 27672999 + 1.53846 NA Intergenic HSAT4|Satellite|centr -120538 NR_146733 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 244.231 chr4 78226308 78226515 + 1.46154 NA intron (NM_001166133, intron 2 of 41) L1MEg|LINE|L1 -62574 NR_145782 109623453 NR_145782 SNORD161 - small nucleolar RNA, C/D box 161 snoRNA 172.769-4 chr17 69599292 69599507 + 1.46154 NA intron (NR_109972, intron 2 of 4) intron (NR_109972, intron 2 of 4) 5412 NR_109971 101928122 Hs.579342 NR_109971 ENSG00000227517 LINC01483 - long intergenic non-protein coding RNA 1483 ncRNA 206.616 chr2 49627439 49627933 + 1.46154 NA Intergenic Intergenic 346517 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 271.539 chr10 115877615 115877992 + 1.46154 NA intron (NM_207303, intron 28 of 28) intron (NM_207303, intron 28 of 28) 316986 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA 293.385-2 chr4 115353798 115354071 + 1.46154 NA Intergenic L1PA7|LINE|L1 -240314 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding 212.539 chr8 126985921 126986228 + 1.46154 NA Intergenic Intergenic -27080 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 225.846-2 chr1 222816720 222817145 + 1.46154 NA intron (NM_032890, intron 1 of 9) intron (NM_032890, intron 1 of 9) 1893 NM_032890 84976 Hs.528817 NM_032890 ENSG00000154309 DISP1 DISPA dispatched RND transporter family member 1 protein-coding 163.692 chr1 208380890 208381105 + 1.46154 NA Intergenic MLT1J2|LTR|ERVL-MaLR -136613 NM_025179 5362 Hs.497626 NM_025179 ENSG00000076356 PLXNA2 OCT|PLXN2 plexin A2 protein-coding 156.154-6 chr3 23410066 23410215 + 1.46154 NA intron (NM_001370225, intron 3 of 5) intron (NM_001370225, intron 3 of 5) 206813 NM_001370228 7325 Hs.475688 NM_152653 ENSG00000182247 UBE2E2 UBCH8 ubiquitin conjugating enzyme E2 E2 protein-coding 262.692 chr1 218391854 218392088 + 1.46154 NA intron (NR_138149, intron 2 of 7) L3|LINE|CR1 -45662 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA 353.154 chr15 35611543 35611832 + 1.46154 NA intron (NR_038251, intron 1 of 2) L1MEc|LINE|L1 65492 NR_038251 100507466 Hs.536420 NR_038251 ENSG00000248079 DPH6-DT ATPBD4-AS1|DPH6-AS1 DPH6 divergent transcript ncRNA 217.538 chr3 189502249 189502629 + 1.46154 NA Intergenic Intergenic -94307 NM_001329964 8626 Hs.137569 NM_003722 ENSG00000073282 TP63 AIS|B(p51A)|B(p51B)|EEC3|KET|LMS|NBP|OFC8|RHS|SHFM4|TP53CP|TP53L|TP73L|p40|p51|p53CP|p63|p73H|p73L tumor protein p63 protein-coding 280.077 chrX 88672814 88673066 + 1.46154 NA Intergenic Intergenic -74285 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding 317.462 chr4 53858524 53858902 + 1.46154 NA Intergenic L1MEg|LINE|L1 128569 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo 293.385 chr4 83908034 83908452 + 1.46154 NA Intergenic Intergenic 372135 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding 334.846 chr11 39176629 39177100 + 1.46154 NA Intergenic Intergenic 528006 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA 266.385 chr8 112138211 112138471 + 1.46154 NA Intergenic L2a|LINE|L2 -505152 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 323.769 chr5 36893332 36893858 + 1.46154 NA intron (NM_015384, intron 1 of 45) intron (NM_015384, intron 1 of 45) 16826 NM_015384 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding 331.539 chr14 83145426 83145693 + 1.46154 NA Intergenic L1ME3A|LINE|L1 502927 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 299.769 chr11 41706869 41707161 + 1.46154 NA Intergenic Intergenic -7553 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA 269.693 chr2 158169549 158169823 + 1.46154 NA intron (NR_038850, intron 1 of 4) L1ME3B|LINE|L1 3036 NR_038850 554201 Hs.570262 NR_038850 ENSG00000227480 CCDC148-AS1 - CCDC148 antisense RNA 1 ncRNA 338.308 chr4 65964385 65964831 + 1.46154 NA Intergenic Intergenic -294113 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding 232.154-4 chr9 90113697 90113962 + 1.46154 NA Intergenic Intergenic -72330 NR_038882 286370 Hs.407589 NR_038882 ENSG00000227555 MIR4290HG - MIR4290 host gene ncRNA 230.692-3 chr3 105058131 105058496 + 1.46154 NA Intergenic Intergenic -308400 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 160.846-9 chr7 47754379 47754564 + 1.46154 NA Intergenic L1MA4|LINE|L1 -7005 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA 197.385-3 chr14 41125271 41125539 + 1.46154 NA intron (NR_109758, intron 3 of 3) intron (NR_109758, intron 3 of 3) 170694 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 320.385 chr11 83987973 83988357 + 1.46154 NA intron (NM_001142699, intron 11 of 27) L1PA11|LINE|L1 285115 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 179.154 chr1 184262566 184262804 + 1.46154 NA Intergenic L1M4a1|LINE|L1 -124344 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding 304.769 chr8 131337292 131337677 + 1.46154 NA Intergenic Intergenic -296575 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 239.308-2 chr15 33240177 33240407 + 1.46154 NA intron (NR_046005, intron 7 of 8) L1ME3|LINE|L1 7263 NR_046005 100652857 Hs.439998 NR_046005 TMCO5B - transmembrane and coiled-coil domains 5B (pseudogene) pseudo 294 chr6 56109069 56109362 + 1.46154 NA intron (NR_134851, intron 16 of 29) L1MC4|LINE|L1 -17553 NM_001318754 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 196.231-2 chr2 4962581 4962778 + 1.46154 NA Intergenic Intergenic -306457 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA 181.539-5 chr7 966382 966662 + 1.46154 NA 3' UTR (NM_001031617, exon 3 of 3) 3' UTR (NM_001031617, exon 3 of 3) 9027 NM_001031617 90639 Hs.121593 NM_001031617 ENSG00000240230 COX19 - cytochrome c oxidase assembly factor COX19 protein-coding 196.231 chr11 27014467 27014720 + 1.46154 NA Intergenic Intergenic 20481 NM_203371 387758 Hs.712718 NM_203371 ENSG00000176971 FIBIN - fin bud initiation factor homolog protein-coding 166.231-4 chr7 8251264 8251444 + 1.46154 NA intron (NM_001350826, intron 1 of 14) intron (NM_001350826, intron 1 of 14) 10698 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding 237.385-2 chr8 138388430 138388647 + 1.46154 NA intron (NM_001362965, intron 1 of 19) L1MC1|LINE|L1 108723 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 154.846-4 chr4 32243541 32243683 + 1.46154 NA Intergenic Intergenic -107426 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 177.615-2 chr12 86482388 86482556 + 1.46154 NA intron (NM_013244, intron 1 of 6) intron (NM_013244, intron 1 of 6) -225173 NM_001351287 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding 252.769-2 chr16 76080997 76081204 + 1.46154 NA Intergenic Intergenic -196301 NM_001322178 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding 199.923-3 chr5 56871668 56871875 + 1.46154 NA intron (NM_005921, intron 6 of 19) intron (NM_005921, intron 6 of 19) -37489 NR_136556 133383 Hs.85950 NM_153706 ENSG00000155542 SETD9 C5orf35 SET domain containing 9 protein-coding 178.385-13 chr5 98373477 98373640 + 1.46154 NA Intergenic L1MEf|LINE|L1 -212319 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA 202.769-4 chr4 21978654 21978837 + 1.46154 NA Intergenic Intergenic -29994 NM_147182 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding 247.077-2 chr3 44613543 44613777 + 1.46154 NA intron (NM_001351734, intron 2 of 6).2 L1MA5|LINE|L1 11137 NR_046658 100874094 NR_046658 ENSG00000233509 ZNF197-AS1 - ZNF197 antisense RNA 1 ncRNA 270.308 chr14 30660916 30661230 + 1.46154 NA intron (NM_016106, intron 10 of 24) intron (NM_016106, intron 10 of 24) 38754 NM_016106 23256 Hs.369168 NM_016106 ENSG00000092108 SCFD1 C14orf163|RA410|SLY1|SLY1P|STXBP1L2 sec1 family domain containing 1 protein-coding 246.616 chr2 182134045 182134268 + 1.46154 NA Intergenic Intergenic 107907 NM_001258314 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding 166.154-10 chr8 125679362 125679527 + 1.38462 NA Intergenic Intergenic 247235 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 178.462 chr10 23283594 23283845 + 1.38462 NA intron (NM_001365862, intron 7 of 15) L2c|LINE|L2 -60238 NR_155752 105376453 NR_155752 LOC105376453 - uncharacterized LOC105376453 ncRNA 174.462-3 chr5 39638006 39638171 + 1.38462 NA Intergenic Intergenic 117657 NR_104632 101926940 Hs.436359 NR_104632 ENSG00000271334 LINC02104 - long intergenic non-protein coding RNA 2104 ncRNA 175.846-2 chr10 114481578 114481720 + 1.38462 NA intron (NM_001352440, intron 8 of 20) intron (NM_001352440, intron 8 of 20) 45264 NM_001322891 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding 166.846-3 chr14 74832980 74833202 + 1.38462 NA intron (NM_019589, intron 19 of 20) MamSINE1|SINE|tRNA-RTE 30743 NM_001080408 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding 389.232 chr8 92589447 92589829 + 1.38462 NA intron (NR_125827, intron 3 of 4) intron (NR_125827, intron 3 of 4) 65856 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 254.462 chr11 114153541 114154258 + 1.38462 NA intron (NM_006006, intron 2 of 6) MIR3|SINE|MIR 90688 NM_001354752 7704 Hs.591945 NM_006006 ENSG00000109906 ZBTB16 PLZF|ZNF145 zinc finger and BTB domain containing 16 protein-coding 334.385 chr7 31764764 31765095 + 1.38462 NA intron (NM_001191059, intron 18 of 18) intron (NM_001191059, intron 18 of 18) 77714 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding 208-3 chr18 76040922 76041156 + 1.38462 NA Intergenic Intergenic -81959 NR_040034 339298 Hs.151215 NR_040034 ENSG00000263547 LOC339298 - uncharacterized LOC339298 ncRNA 211.077-5 chr5 37131137 37131467 + 1.38462 NA intron (NM_023073, intron 45 of 51) intron (NM_023073, intron 45 of 51) -117744 NR_134263 105374727 Hs.170993 NR_134263 ENSG00000286193 LOC105374727 - uncharacterized LOC105374727 ncRNA 237.231-2 chr21 26960710 26961029 + 1.38462 NA intron (NM_007038, intron 1 of 7) L2c|LINE|L2 6219 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 287.538 chr14 66821312 66821626 + 1.38462 NA intron (NM_001024218, intron 3 of 21) intron (NM_001024218, intron 3 of 21) 314062 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 207.231-8 chr5 91727073 91727445 + 1.38462 NA Intergenic Intergenic -343942 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 301.847 chr7 27933987 27934347 + 1.38462 NA intron (NM_175061, intron 2 of 4) intron (NM_175061, intron 2 of 4) 194072 NM_001362794 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding 158.077-6 chr3 114053052 114053190 + 1.38462 NA intron (NM_001353766, intron 1 of 15) L3|LINE|CR1 3405 NM_001353766 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding 194.231 chr1 236572355 236572646 + 1.38462 NA exon (NM_018072, exon 26 of 45) exon (NM_018072, exon 26 of 45) 32016 NM_018072 55127 Hs.708114 NM_018072 ENSG00000119285 HEATR1 BAP28|UTP10 HEAT repeat containing 1 protein-coding 315.461-2 chr7 43132962 43133443 + 1.38462 NA intron (NR_135295, intron 3 of 6) intron (NR_135295, intron 3 of 6) 15306 NR_135295 100127950 Hs.666610 NR_135295 ENSG00000181211 HECW1-IT1 - HECW1 intronic transcript 1 ncRNA 241.847 chr8 129345882 129346081 + 1.38462 NA Intergenic Intergenic -104741 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 182.154-9 chrX 33798327 33798559 + 1.38462 NA Intergenic Intergenic 333887 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding 217.693 chr5 24700382 24700660 + 1.38462 NA Intergenic L1M1|LINE|L1 -55543 NM_001317224 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding 276.462 chr2 52257124 52257515 + 1.38462 NA intron (NR_135237, intron 7 of 10) intron (NR_135237, intron 7 of 10) -113329 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 236.769 chr9 106356576 106356898 + 1.38462 NA Intergenic L1PA15|LINE|L1 -244191 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA 260.769-2 chr21 23156293 23156550 + 1.38462 NA Intergenic Intergenic 77137 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA 191.308-7 chr8 142072468 142072727 + 1.38462 NA Intergenic Intergenic -103742 NR_039682 100616268 NR_039682 ENSG00000265247 MIR4472-1 - microRNA 4472-1 ncRNA 181.385 chr17 62344455 62344693 + 1.38462 NA Intergenic Intergenic -25644 NM_001144933 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding 230.769-3 chr9 29248853 29249128 + 1.38462 NA Intergenic Intergenic -35389 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 213.231-6 chr8 77548725 77549031 + 1.38462 NA Intergenic L1PA16|LINE|L1 98181 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA 170.231 chr1 40322146 40322381 + 1.38462 NA Intergenic Intergenic -4977 NM_001852 1298 Hs.418012 NM_001852 ENSG00000049089 COL9A2 DJ39G22.4|EDM2|MED|STL5 collagen type IX alpha 2 chain protein-coding 231.385-4 chr7 104508526 104508764 + 1.38462 NA intron (NM_199000, intron 1 of 2) intron (NM_199000, intron 1 of 2) 179989 NM_199000 375612 Hs.659164 NM_199000 ENSG00000187416 LHFPL3 LHFPL4 LHFPL tetraspan subfamily member 3 protein-coding 269.693-2 chr8 112670850 112671099 + 1.38462 NA intron (NM_001363185, intron 14 of 66) intron (NM_001363185, intron 14 of 66) 27481 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 346.462 chr11 28120627 28121200 + 1.38462 NA intron (NM_001113528, intron 3 of 6) L1MA3|LINE|L1 12525 NM_001113528 196074 Hs.243326 NM_152636 ENSG00000169519 METTL15 METT5D1 methyltransferase like 15 protein-coding 169.539 chr11 59726382 59726629 + 1.38462 NA Intergenic Intergenic -12660 NM_001005324 390201 Hs.589001 NM_001005324 ENSG00000172289 OR10V1 OR11-256 olfactory receptor family 10 subfamily V member 1 protein-coding 223.385 chr14 70758907 70759101 + 1.38462 NA intron (NM_033141, intron 3 of 12) L1MB7|LINE|L1 24448 NM_001284231 4293 Hs.445496 NM_033141 ENSG00000006432 MAP3K9 MEKK9|MLK1|PRKE1 mitogen-activated protein kinase kinase kinase 9 protein-coding 227 chr15 37972410 37972702 + 1.38462 NA intron (NM_001370737, intron 12 of 13) L1PA15|LINE|L1 37914 NM_001370736 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding 193.846 chr13 48984350 48984621 + 1.38462 NA intron (NR_103528, intron 1 of 25) L1ME3G|LINE|L1 7823 NR_103528 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding 284.539 chr11 111919818 111920090 + 1.38462 NA intron (NM_080659, intron 1 of 3) AluY|SINE|Alu 1041 NM_080659 91894 Hs.97013 NM_080659 ENSG00000149300 C11orf52 - chromosome 11 open reading frame 52 protein-coding 179.231-6 chr3 164434701 164434849 + 1.38462 NA Intergenic Intergenic -263219 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA 189.693 chr10 19740610 19740776 + 1.38462 NA Intergenic Intergenic -12143 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA 181.385-3 chr5 99320821 99320981 + 1.38462 NA Intergenic Intergenic -213089 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA 230.616 chr6 20386061 20386312 + 1.38462 NA Intergenic Intergenic -15693 NM_001949 1871 Hs.269408 NM_001949 ENSG00000112242 E2F3 E2F-3 E2F transcription factor 3 protein-coding 198.231-2 chr18 71602375 71602606 + 1.38462 NA Intergenic L1MB4|LINE|L1 -23534 NR_038325 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA 172.462-2 chr14 57553471 57553697 + 1.38462 NA Intergenic L1M3f|LINE|L1 -59727 NM_001283058 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding 204.231-6 chr6 106429771 106429991 + 1.38462 NA intron (NM_001371242, intron 1 of 21) intron (NM_001371242, intron 1 of 21) 27367 NR_134603 105377924 Hs.741855 NR_134603 ENSG00000282408 LOC105377924 - uncharacterized LOC105377924 ncRNA 277 chr14 49231643 49232175 + 1.38462 NA Intergenic L1MB7|LINE|L1 354471 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 186.923-5 chr2 41855723 41855910 + 1.38462 NA Intergenic Intergenic -21739 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 318.308 chr1 244631490 244631946 + 1.38462 NA intron (NM_001130957, intron 20 of 21) L1MC|LINE|L1 -21330 NR_123735 51029 Hs.498317 NM_016076 ENSG00000121644 DESI2 C1orf121|CGI-146|DESI|DESI1|DeSI-2|FAM152A|PNAS-4|PPPDE1 desumoylating isopeptidase 2 protein-coding 250.308 chr1 27819928 27820175 + 1.38462 NA intron (NM_177424, intron 8 of 8) intron (NM_177424, intron 8 of 8) -10731 NM_138558 5511 Hs.533474 NM_002713 ENSG00000117751 PPP1R8 ARD-1|ARD1|NIPP-1|NIPP1|PRO2047 protein phosphatase 1 regulatory subunit 8 protein-coding 252.924 chr1 151468276 151468596 + 1.38462 NA Intergenic AluJr|SINE|Alu -8942 NM_001194938 23126 Hs.489873 NM_015100 ENSG00000143442 POGZ MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m pogo transposable element derived with ZNF domain protein-coding 156.923-6 chr17 61872358 61872502 + 1.38462 NA exon (NM_020748, exon 20 of 25) exon (NM_020748, exon 20 of 25) -8871 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding 203.539 chr17 77878228 77878486 + 1.38462 NA TTS (NR_028337) TTS (NR_028337) 5730 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA 277.462 chr5 121987015 121987490 + 1.38462 NA intron (NM_152546, intron 3 of 7) intron (NM_152546, intron 3 of 7) 25277 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding 283.154 chr14 54419215 54419524 + 1.38462 NA intron (NM_001330173, intron 8 of 8) intron (NM_001330173, intron 8 of 8) 22005 NM_005776 10175 Hs.294603 NM_005776 ENSG00000100528 CNIH1 CNIH|CNIH-1|CNIL|TGAM77 cornichon family AMPA receptor auxiliary protein 1 protein-coding 214 chr2 73708843 73709222 + 1.38462 NA Intergenic L2a|LINE|L2 -7692 NM_016347 51471 Hs.278983 NM_016347 ENSG00000204872 NAT8B CML2|Hcml2|NAT8BP N-acetyltransferase 8B (putative, gene/pseudogene) protein-coding 158-6 chr7 18445283 18445407 + 1.38462 NA intron (NM_001321896, intron 1 of 12) intron (NM_001321896, intron 1 of 12) -50365 NM_001204146 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 159.385 chr1 22040520 22040701 + 1.38462 NA Intergenic AluJo|SINE|Alu -12099 NM_001039802 998 Hs.467637 NM_001791 ENSG00000070831 CDC42 CDC42Hs|G25K|TKS cell division cycle 42 protein-coding 211.154 chr16 50790061 50790254 + 1.38462 NA intron (NM_015247, intron 15 of 19) L1ME4a|LINE|L1 -16515 NR_146573 105371252 NR_146573 ENSG00000261703 LINC02168 - long intergenic non-protein coding RNA 2168 ncRNA 240.923 chr3 103031119 103031364 + 1.38462 NA Intergenic MER104|DNA|TcMar-Tc2 492875 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 251.077 chr5 20669793 20670232 + 1.38462 NA intron (NR_149120, intron 2 of 11) L1ME3|LINE|L1 -54477 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA 168.77 chr5 166681226 166681403 + 1.38462 NA Intergenic Intergenic 245056 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA 164.923-7 chr4 47762093 47762503 + 1.38462 NA intron (NM_006587, intron 4 of 21) L1MA8|LINE|L1 -69047 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA 181.308-4 chr2 109090937 109091112 + 1.38462 NA Intergenic MER96B|DNA|hAT-Tip100 -38181 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding 267.231 chr2 13668174 13668513 + 1.38462 NA Intergenic L1MCc|LINE|L1 -661330 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 243.001-2 chr14 82282681 82282905 + 1.38462 NA Intergenic Intergenic -359839 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 239.693 chr2 210124044 210124340 + 1.38462 NA intron (NM_001307976, intron 3 of 13) L1MB3|LINE|L1 47217 NM_001307976 151050 Hs.282260 NM_152519 ENSG00000144445 KANSL1L C2orf67|MSL1v2 KAT8 regulatory NSL complex subunit 1 like protein-coding 202.615-2 chr2 35062751 35063004 + 1.38462 NA Intergenic Intergenic 385320 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 339.385 chr5 51814069 51814731 + 1.38462 NA Intergenic Intergenic -193631 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA 204.231-3 chr2 106103477 106103680 + 1.38462 NA intron (NM_025076, intron 11 of 14) intron (NM_025076, intron 11 of 14) 35303 NM_001253876 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding 217.847 chr3 17934416 17934665 + 1.38462 NA Intergenic MER3|DNA|hAT-Charlie -28012 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA 232.077-2 chr6 99755860 99756245 + 1.38462 NA Intergenic Intergenic 149278 NM_021620 59336 Hs.287386 NM_021620 ENSG00000112238 PRDM13 MU-MB-20.220|PFM10 PR/SET domain 13 protein-coding 221.539 chr12 873235 873457 + 1.38462 NA intron (NM_014823, intron 9 of 25) intron (NM_014823, intron 9 of 25) 59730 NM_001297420 5893 Hs.410355 NM_134422 ENSG00000002016 RAD52 - RAD52 homolog, DNA repair protein protein-coding 243.692 chr20 20569687 20569992 + 1.30769 NA intron (NM_020343, intron 23 of 39) intron (NM_020343, intron 23 of 39) 142805 NM_020343 57186 Hs.472285 NM_020343 ENSG00000188559 RALGAPA2 AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220 Ral GTPase activating protein catalytic alpha subunit 2 protein-coding 191.538-2 chr2 38634146 38634316 + 1.30769 NA Intergenic Intergenic -31195 NM_001142650 92906 Hs.445497 NM_138394 ENSG00000143889 HNRNPLL HNRPLL|SRRF heterogeneous nuclear ribonucleoprotein L like protein-coding 291.077 chr8 112949954 112950444 + 1.30769 NA intron (NM_001363185, intron 6 of 66) intron (NM_001363185, intron 6 of 66) 306706 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 233.692-2 chr7 4964380 4964627 + 1.30769 NA Intergenic MER67A|LTR|ERV1 -5316 NM_001100600 221938 Hs.558694 NM_198403 ENSG00000136297 MMD2 PAQR10 monocyte to macrophage differentiation associated 2 protein-coding 218 chr21 30178309 30178558 + 1.30769 NA Intergenic Intergenic -11628 NM_012131 26285 Hs.258589 NM_012131 ENSG00000156282 CLDN17 - claudin 17 protein-coding 260.692 chr7 8200475 8200695 + 1.30769 NA intron (NM_001350836, intron 7 of 14) intron (NM_001350836, intron 7 of 14) 61467 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding 252.923 chr7 53093994 53094321 + 1.30769 NA Intergenic Intergenic 58524 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 207.461 chr8 121366655 121366856 + 1.30769 NA Intergenic MamRep434|DNA|TcMar-Tigger -272591 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 184.846-8 chr2 38141296 38141500 + 1.30769 NA intron (NR_027252, intron 2 of 2) L1MC4|LINE|L1 10293 NR_027252 285154 Hs.353894 NM_173652 ENSG00000232973 CYP1B1-AS1 C2orf58 CYP1B1 antisense RNA 1 ncRNA 285.384 chr4 141256719 141257010 + 1.30769 NA Intergenic L2a|LINE|L2 35969 NM_014487 27309 Hs.120766 NM_014487 ENSG00000109445 ZNF330 HSA6591|NOA36 zinc finger protein 330 protein-coding 304.462 chr12 43133439 43133932 + 1.30769 NA Intergenic MLT1J|LTR|ERVL-MaLR -21630 NR_146866 105369740 Hs.577746 NR_146866 ENSG00000258331 LINC02461 - long intergenic non-protein coding RNA 2461 ncRNA 165.154-6 chr7 70075010 70075460 + 1.30769 NA intron (NM_015570, intron 2 of 18) intron (NM_015570, intron 2 of 18) 476760 NM_001127232 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding 212.769 chr10 29984635 29984929 + 1.30769 NA Intergenic Intergenic 74804 NM_001350001 57608 Hs.533953 NM_020848 ENSG00000165757 JCAD KIAA1462 junctional cadherin 5 associated protein-coding 245.923 chr10 97264487 97264730 + 1.30769 NA intron (NM_032900, intron 3 of 11) intron (NM_032900, intron 3 of 11) 6049 NM_001256423 84986 Hs.80305 NM_032900 ENSG00000213390 ARHGAP19 - Rho GTPase activating protein 19 protein-coding 184.461-2 chr7 156587852 156588150 + 1.30769 NA intron (NR_026865, intron 2 of 3) Charlie15b|DNA|hAT-Charlie 15194 NR_103858 100506380 Hs.647014 NM_032625 ENSG00000182648 LINC01006 C7orf13|MY040 long intergenic non-protein coding RNA 1006 ncRNA 233.615-2 chr2 182470547 182470759 + 1.30769 NA intron (NM_005019, intron 1 of 14) L2c|LINE|L2 -43605 NM_001258313 5136 Hs.191046 NM_005019 ENSG00000115252 PDE1A CAM-PDE 1A|CAM-PDE-1A|HCAM-1|HCAM1|HSPDE1A phosphodiesterase 1A protein-coding 256.615 chr2 191149632 191149864 + 1.30769 NA intron (NM_001243835, intron 1 of 23) intron (NM_001243835, intron 1 of 23) 1246 NM_003151 6775 Hs.80642 NM_003151 ENSG00000138378 STAT4 SLEB11 signal transducer and activator of transcription 4 protein-coding 179-4 chr6 74075828 74076039 + 1.30769 NA intron (NR_110856, intron 1 of 3) intron (NR_110856, intron 1 of 3) 6482 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 154.769-7 chrX 40552225 40552351 + 1.30769 NA Intergenic MER33|DNA|hAT-Charlie -28682 NM_005765 10159 Hs.495960 NM_005765 ENSG00000182220 ATP6AP2 APT6M8-9|ATP6IP2|ATP6M8-9|ELDF10|HT028|M8-9|MRXE|MRXSH|MSTP009|PRR|RENR|XMRE|XPDS ATPase H+ transporting accessory protein 2 protein-coding 190.077 chr1 24008716 24008885 + 1.30769 NA Intergenic Intergenic -28337 NR_034035 10772 Hs.3530 NM_006625 ENSG00000188529 SRSF10 FUSIP1|FUSIP2|NSSR|PPP1R149|SFRS13|SFRS13A|SRp38|SRrp40|TASR|TASR1|TASR2 serine and arginine rich splicing factor 10 protein-coding 212.846-3 chr7 26407259 26407481 + 1.30769 NA intron (NR_148503, intron 2 of 6) intron (NR_148503, intron 2 of 6) -7952 NR_136272 105375304 Hs.735352 NR_136270 ENSG00000225792 LOC105375304 - uncharacterized LOC105375304 ncRNA 207.231-3 chr12 97717078 97717557 + 1.30769 NA intron (NR_077241, intron 6 of 6) Charlie1|DNA|hAT-Charlie 36281 NR_077241 643711 Hs.585557 NR_077240 ENSG00000257501 LOC643711 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 pseudogene pseudo 173.077-4 chr4 85601149 85601358 + 1.30769 NA intron (NM_001025616, intron 2 of 9) L2a|LINE|L2 -121215 NR_039656 100616349 NR_039656 ENSG00000266421 MIR4451 mir-4451 microRNA 4451 ncRNA 166.769-8 chr7 30988230 30988397 + 1.30769 NA Intergenic Intergenic 24360 NM_000823 2692 Hs.767 NM_000823 ENSG00000106128 GHRHR GHRFR|GRFR|IGHD1B|IGHD4 growth hormone releasing hormone receptor protein-coding 180.538-2 chr1 79506389 79506601 + 1.30769 NA Intergenic Intergenic -499765 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding 202.615-4 chr2 187247951 187248144 + 1.30769 NA Intergenic Intergenic 200205 NM_001271751 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding 276.615 chr1 119707976 119708260 + 1.30769 NA Intergenic L2a|LINE|L2 -3816 NM_006623 26227 Hs.487296 NM_006623 ENSG00000092621 PHGDH 3-PGDH|3PGDH|HEL-S-113|NLS|NLS1|PDG|PGAD|PGD|PGDH|PHGDHD|SERA phosphoglycerate dehydrogenase protein-coding 201.231 chr2 13782334 13782637 + 1.30769 NA Intergenic Intergenic 618473 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA 183.308 chr1 73883168 73883514 + 1.30769 NA Intergenic L1MC2|LINE|L1 208662 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA 199.462 chr1 222544292 222544582 + 1.30769 NA intron (NM_024746, intron 1 of 8) intron (NM_024746, intron 1 of 8) 3667 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding 155.538 chr1 152539924 152540369 + 1.30769 NA Intergenic Intergenic 25664 NM_019060 54544 Hs.110196 NM_019060 ENSG00000169509 CRCT1 C1orf42|NICE-1|NICE1 cysteine rich C-terminal 1 protein-coding 244.385 chr1 51425942 51426174 + 1.30769 NA intron (NM_001981, intron 12 of 24) intron (NM_001981, intron 12 of 24) -3963 NM_001159969 2060 Hs.83722 NM_001981 ENSG00000085832 EPS15 AF-1P|AF1P|MLLT5 epidermal growth factor receptor pathway substrate 15 protein-coding 221.615-3 chr8 127274166 127274428 + 1.30769 NA intron (NR_117099, intron 1 of 3) MLT1E1A|LTR|ERVL-MaLR 29660 NR_117099 103021164 Hs.571531 NR_117099 CASC21 CARLO2|CARLo-2|LINC01244 cancer susceptibility 21 ncRNA 200.923-3 chr6 150967698 150967863 + 1.30769 NA intron (NM_001350486, intron 19 of 27) L2a|LINE|L2 -39228 NM_001350490 25902 Hs.591343 NM_015440 ENSG00000120254 MTHFD1L FTHFSDC1|MTC1THFS|dJ292B18.2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like protein-coding 215.307-2 chr10 65131379 65131606 + 1.30769 NA Intergenic L1ME2z|LINE|L1 -206974 NR_134456 101928887 Hs.463900 NR_134456 ENSG00000224714 LINC02671 - long intergenic non-protein coding RNA 2671 ncRNA 214.692 chr18 71578564 71578751 + 1.30769 NA intron (NR_038326, intron 1 of 4) intron (NR_038326, intron 1 of 4) 299 NR_038326 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA 386.077 chr4 61286890 61287336 + 1.30769 NA intron (NM_001371342, intron 1 of 20) intron (NM_001371342, intron 1 of 20) 84941 NM_001371342 344.154 chr14 64467076 64467529 + 1.30769 NA intron (NM_004857, intron 1 of 1) MIRb|SINE|MIR 1803 NM_004857 9495 Hs.656683 NM_004857 ENSG00000179841 AKAP5 AKAP75|AKAP79|H21 A-kinase anchoring protein 5 protein-coding 248.692 chr4 121544167 121544505 + 1.30769 NA Intergenic L1M5|LINE|L1 152644 NM_001154 308 Hs.480653 NM_001154 ENSG00000164111 ANXA5 ANX5|ENX2|HEL-S-7|PP4|RPRGL3 annexin A5 protein-coding 195.923-2 chr2 4979760 4980059 + 1.30769 NA Intergenic L2|LINE|L2 -323687 NR_034134 727982 Hs.444391 NR_034134 ENSG00000231532 LINC01249 - long intergenic non-protein coding RNA 1249 ncRNA 202.231 chr3 95167836 95168122 + 1.30769 NA Intergenic L1ME1|LINE|L1 229716 NR_015400 255025 Hs.130994 NR_015400 ENSG00000239589 LINC00879 - long intergenic non-protein coding RNA 879 ncRNA 241.538 chr2 197136481 197136760 + 1.30769 NA exon (NM_001195144, exon 4 of 28) exon (NM_001195144, exon 4 of 28) -61371 NR_135584 101927596 NR_135584 ENSG00000231621 LOC101927596 - uncharacterized LOC101927596 ncRNA 236.154-2 chr11 72867395 72867862 + 1.30769 NA intron (NM_014824, intron 13 of 19) intron (NM_014824, intron 13 of 19) 53217 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding 223.077 chr14 74868362 74868645 + 1.30769 NA Intergenic L1ME4a|LINE|L1 -4669 NM_001243007 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding 260.385 chr10 29147274 29147980 + 1.30769 NA Intergenic L4_B_Mam|LINE|RTE-X -141443 NM_032517 84569 Hs.558572 NM_032517 ENSG00000120563 LYZL1 KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1 lysozyme like 1 protein-coding 223.692-2 chr8 90131480 90131721 + 1.30769 NA Intergenic Intergenic -48721 NM_001366795 793 Hs.65425 NM_004929 ENSG00000104327 CALB1 CALB|D-28K calbindin 1 protein-coding 187.384-4 chr18 11036062 11036351 + 1.30769 NA intron (NM_022068, intron 2 of 51) L4_A_Mam|LINE|RTE-X 112556 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding 200 chr2 59544846 59545091 + 1.30769 NA Intergenic Intergenic 327260 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 321.615 chr8 79339022 79339397 + 1.30769 NA Intergenic Intergenic 7021 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 156.231-2 chr18 22794141 22794279 + 1.30769 NA Intergenic L1MD|LINE|L1 -7373 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 266.692-3 chr21 28168013 28168340 + 1.30769 NA intron (NR_126012, intron 4 of 5) intron (NR_126012, intron 4 of 5) 60491 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 213.692-3 chr17 67517919 67518160 + 1.30769 NA intron (NM_181671, intron 1 of 9) intron (NM_181671, intron 1 of 9) -46454 NR_030385 693131 NR_030385 ENSG00000263690 MIR548D2 MIRN548D2 microRNA 548d-2 ncRNA 237.615-2 chr5 175191092 175191315 + 1.30769 NA Intergenic MIRb|SINE|MIR -195472 NR_046113 441116 Hs.533036 NM_001004348 ENSG00000204754 LINC01951 - long intergenic non-protein coding RNA 1951 ncRNA 237.769 chr7 30367879 30368160 + 1.30769 NA TTS (NM_147128) TTS (NM_147128) -2031 NR_002186 222161 Hs.112423 NR_002186 DKFZP586I1420 - uncharacterized protein DKFZp586I1420 pseudo 255.692 chr1 111924354 111924724 + 1.30769 NA intron (NM_172198, intron 2 of 6) intron (NM_172198, intron 2 of 6) 14882 NR_046619 100873995 Hs.535274 NR_046619 ENSG00000237556 KCND3-AS1 - KCND3 antisense RNA 1 ncRNA 190.23 chr18 74985309 74985493 + 1.30769 NA intron (NM_017757, intron 7 of 7) intron (NM_017757, intron 7 of 7) 220112 NM_001306093 284273 Hs.465433 NM_175907 ENSG00000180011 ZADH2 PRG-3 zinc binding alcohol dehydrogenase domain containing 2 protein-coding 242.538-2 chr7 13065016 13065456 + 1.30769 NA Intergenic Intergenic 377603 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding 223.615-2 chr5 20019102 20019312 + 1.30769 NA intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -31007 NM_001349561 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 229.077 chr15 97968854 97969218 + 1.30769 NA intron (NM_183376, intron 4 of 7) intron (NM_183376, intron 4 of 7) 8333 NM_183376 91947 Hs.6093 NM_183376 ENSG00000140450 ARRDC4 - arrestin domain containing 4 protein-coding 206.385-3 chr2 41162828 41163073 + 1.30769 NA Intergenic L1MEc|LINE|L1 -650515 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 241 chr11 78604981 78605239 + 1.30769 NA Intergenic L1MC4|LINE|L1 -30246 NM_024678 79731 Hs.503389 NM_024678 ENSG00000137513 NARS2 DFNB94|SLM5|asnRS asparaginyl-tRNA synthetase 2, mitochondrial protein-coding 169 chr1 62964927 62965090 + 1.30769 NA Intergenic Tigger15a|DNA|TcMar-Tigger 45917 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA 162-14 chr9 8914323 8914498 + 1.30769 NA intron (NM_002839, intron 11 of 45) MER97a|DNA|hAT-Tip100 56392 NR_121599 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA 218.615-4 chr5 17662174 17662576 + 1.30769 NA Intergenic L1PB1|LINE|L1 -6737 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding 218.923 chr17 66151530 66152033 + 1.30769 NA intron (NM_001353129, intron 4 of 26) MLT1F2|LTR|ERVL-MaLR 40111 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 273.308 chr3 189922668 189923015 + 1.30769 NA Intergenic L1MC3|LINE|L1 92919 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA 198.615-2 chr5 161221465 161221785 + 1.30769 NA Intergenic L1MEg|LINE|L1 -282999 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA 229.153 chr11 47002688 47003051 + 1.30769 NA intron (NR_103472, intron 2 of 7) intron (NR_103472, intron 2 of 7) 66108 NM_001003678 79096 Hs.368296 NM_024113 ENSG00000149179 C11orf49 - chromosome 11 open reading frame 49 protein-coding 214.923-2 chr6 64879080 64879282 + 1.30769 NA intron (NM_001292009, intron 19 of 43) intron (NM_001292009, intron 19 of 43) -422237 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 229.692 chr5 178711397 178711767 + 1.30769 NA TTS (NM_001324339) TTS (NM_001324339) 19077 NM_001324339 6940 Hs.484324 NM_005649 ENSG00000169131 ZNF354A EZNF|HEL104|HKL1|KID-1|KID1|TCF17 zinc finger protein 354A protein-coding 258.154-3 chr5 84793308 84793580 + 1.30769 NA Intergenic Intergenic -408564 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 410.923 chrUn_KI270438v1 104656 106017 + 1.30769 NA NA (GGAATGGAAT)n|Simple_repeat|Simple_repeat NA NA 276.077 chr10 111624280 111624635 + 1.30769 NA Intergenic Intergenic 510166 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 196.615-5 chr8 126778440 126778601 + 1.30769 NA Intergenic L1MEg|LINE|L1 -220042 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 197.077-2 chr12 53034277 53034498 + 1.30769 NA intron (NM_001330654, intron 8 of 13) L1MC4|LINE|L1 -12639 NM_198316 23371 Hs.6147 NM_015319 ENSG00000111077 TNS2 C1-TEN|C1TEN|TENC1 tensin 2 protein-coding 202.692 chr5 103397789 103398282 + 1.30769 NA Intergenic Intergenic 138611 NM_001316968 90355 Hs.482976 NM_033211 ENSG00000181751 C5orf30 - chromosome 5 open reading frame 30 protein-coding 158.461 chr16 64695971 64696141 + 1.30769 NA Intergenic Intergenic 426007 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding 169.461 chr6 53026451 53026594 + 1.30769 NA intron (NM_014920, intron 5 of 13) MIRc|SINE|MIR 30902 NR_001445 125050 NR_001445 ENSG00000202198 RN7SK 7SK RNA component of 7SK nuclear ribonucleoprotein snRNA 173.077-3 chr3 115070762 115070953 + 1.30769 NA intron (NM_015642, intron 1 of 9) intron (NM_015642, intron 1 of 9) 557 NM_001164343 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding 279.154 chr7 144112697 144113096 + 1.30769 NA Intergenic Intergenic 3313 NM_001005480 442361 Hs.553841 NM_001005480 ENSG00000221989 OR2A2 OR2A17P|OR2A2P|OR7-11|OST008 olfactory receptor family 2 subfamily A member 2 protein-coding 288.692 chr8 129418280 129418764 + 1.30769 NA intron (NR_130920, intron 1 of 3) intron (NR_130920, intron 1 of 3) 65620 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA 261.231 chr1 66834650 66834982 + 1.30769 NA intron (NM_024763, intron 11 of 16) Charlie4z|DNA|hAT-Charlie -33557 NM_005478 10022 Hs.251380 NM_005478 ENSG00000172410 INSL5 PRO182|UNQ156 insulin like 5 protein-coding 177.769-7 chr8 122423332 122423504 + 1.30769 NA intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 145226 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 216 chr10 12193556 12193771 + 1.30769 NA intron (NM_001321648, intron 1 of 10) intron (NM_001321648, intron 1 of 10) 2228 NM_014142 11164 Hs.555956 NM_014142 ENSG00000165609 NUDT5 YSA1|YSA1H|YSAH1|hNUDT5 nudix hydrolase 5 protein-coding 178.154-8 chr9 15238634 15238933 + 1.30769 NA intron (NM_001168340, intron 2 of 18) AluJb|SINE|Alu 11435 NM_001168342 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding 156.769-11 chr7 33327943 33328089 + 1.30769 NA intron (NM_198428, intron 9 of 22) L2|LINE|L2 198452 NM_198428 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding 169.077-6 chr8 121262524 121262757 + 1.30769 NA Intergenic Intergenic -376706 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 227.615 chr16 76342072 76342300 + 1.30769 NA intron (NM_001322191, intron 2 of 22) intron (NM_001322191, intron 2 of 22) 32334 NM_138994 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding 194.538 chr10 57702329 57702535 + 1.30769 NA Intergenic Intergenic -397873 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 230.384 chr6 44649552 44649839 + 1.30769 NA Intergenic L1MC3|LINE|L1 -97814 NR_134609 105375075 Hs.123393 NR_134609 LOC105375075 - uncharacterized LOC105375075 ncRNA 265.923 chr10 62014590 62014998 + 1.30769 NA intron (NM_032199, intron 4 of 9) intron (NM_032199, intron 4 of 9) -34563 NM_001244638 84159 Hs.535297 NM_032199 ENSG00000150347 ARID5B DESRT|MRF-2|MRF2 AT-rich interaction domain 5B protein-coding 204.384 chr12 5131523 5131845 + 1.30769 NA Intergenic Intergenic 87805 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding 171.154-8 chr7 37898820 37899456 + 1.30769 NA intron (NM_016616, intron 17 of 17) L1PA11|LINE|L1 17679 NM_003014 6424 Hs.658169 NM_003014 ENSG00000106483 SFRP4 FRP-4|FRPHE|FRZB-2|PYL|sFRP-4 secreted frizzled related protein 4 protein-coding 242.846-2 chr21 32853005 32853278 + 1.30769 NA Intergenic L1ME4a|LINE|L1 -39438 NM_019596 56245 Hs.517235 NM_019596 ENSG00000205929 C21orf62 B37|C21orf120|PRED81 chromosome 21 open reading frame 62 protein-coding 190.308-4 chr20 50926182 50926440 + 1.30769 NA intron (NM_001347511, intron 1 of 4) intron (NM_001347511, intron 1 of 4) -4673 NR_110008 101927631 Hs.301898 NR_110007 ENSG00000259456 ADNP-AS1 - ADNP antisense RNA 1 ncRNA 318.308-2 chr8 129002667 129003170 + 1.30769 NA Intergenic MIR3|SINE|MIR -36917 NR_145483 106144608 NR_145483 ENSG00000229140 LINC00976 - long intergenic non-protein coding RNA 976 ncRNA 303.538 chr3 16248601 16248866 + 1.30769 NA Intergenic Intergenic 16210 NM_001047434 285381 Hs.388087 NM_206831 ENSG00000154813 DPH3 DELGIP|DELGIP1|DESR1|DPH3A|KTI11|ZCSL2 diphthamide biosynthesis 3 protein-coding 229.538 chr1 159250482 159250793 + 1.30769 NA Intergenic L1MCb|LINE|L1 -39077 NM_002001 2205 Hs.897 NM_002001 ENSG00000179639 FCER1A FCE1A|FcERI Fc fragment of IgE receptor Ia protein-coding 216.769 chr22 25793507 25793795 + 1.30769 NA intron (NM_001318245, intron 11 of 43) MIRb|SINE|MIR 51463 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 201.769-3 chr4 57678471 57678629 + 1.30769 NA Intergenic Intergenic 252678 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 185.461-2 chr5 115383446 115383626 + 1.30769 NA Intergenic Intergenic -86882 NM_001040440 153733 Hs.436121 NM_152549 ENSG00000164221 CCDC112 MBC1 coiled-coil domain containing 112 protein-coding 295.077 chr4 96317454 96317877 + 1.30769 NA intron (NR_147149, intron 1 of 3) intron (NR_147149, intron 1 of 3) 6962 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA 229.923-2 chr2 161183835 161184132 + 1.30769 NA intron (NM_001199135, intron 2 of 7) L2c|LINE|L2 23555 NM_001199135 10010 Hs.132257 NM_004180 ENSG00000136560 TANK I-TRAF|ITRAF|TRAF2 TRAF family member associated NFKB activator protein-coding 182.462-6 chr4 47120156 47120398 + 1.30769 NA intron (NM_000812, intron 3 of 8) L1M1|LINE|L1 88710 NM_000812 2560 Hs.27283 NM_000812 ENSG00000163288 GABRB1 EIEE45 gamma-aminobutyric acid type A receptor beta1 subunit protein-coding 163.308 chr1 60040447 60040743 + 1.30769 NA intron (NM_152377, intron 4 of 11) L2|LINE|L2 33175 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding 201.308-7 chr3 130407157 130407462 + 1.30769 NA intron (NM_001278298, intron 17 of 40) L2c|LINE|L2 61793 NM_001278298 256076 Hs.205403 NM_153264 ENSG00000172752 COL6A5 COL29A1|VWA4 collagen type VI alpha 5 chain protein-coding 171.384 chr10 51157137 51157300 + 1.30769 NA intron (NM_001098512, intron 2 of 17) intron (NM_001098512, intron 2 of 17) 82731 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding 224.077 chr11 22868805 22869053 + 1.30769 NA Intergenic Intergenic -8455 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding 243.384-2 chr8 140836492 140836736 + 1.30769 NA intron (NM_001352746, intron 4 of 30) intron (NM_001352746, intron 4 of 30) -103961 NR_029892 442893 NR_029892 ENSG00000254324 MIR151A MIR151|MIRN151|hsa-mir-151|hsa-mir-151a microRNA 151a ncRNA 187 chr2 53541937 53542246 + 1.30769 NA Intergenic L1PB2|LINE|L1 -225692 NM_001346127 494143 Hs.585944 NM_001008708 ENSG00000143942 CHAC2 GCG1 ChaC cation transport regulator homolog 2 protein-coding 239.692-3 chr9 76913370 76913561 + 1.30769 NA Intergenic MIR|SINE|MIR -7351 NM_015225 158471 Hs.262857 NM_015225 ENSG00000106772 PRUNE2 BMCC1|BNIPXL|C9orf65|KIAA0367 prune homolog 2 with BCH domain protein-coding 165.077-4 chr2 43515382 43515610 + 1.30769 NA intron (NM_001083953, intron 22 of 37) intron (NM_001083953, intron 22 of 37) 80478 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding 168.077-2 chr15 86505077 86505300 + 1.30769 NA intron (NM_152336, intron 18 of 24) L1MB7|LINE|L1 -188220 NR_046012 727915 Hs.451281 NR_046012 ENSG00000260125 AGBL1-AS1 - AGBL1 antisense RNA 1 ncRNA 163.846-11 chr5 34540990 34541361 + 1.30769 NA Intergenic MIR|SINE|MIR -115153 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding 218.077-6 chr6 110586243 110586560 + 1.30769 NA Intergenic MER31-int|LTR|ERV1 -109788 NM_033125 85413 Hs.520319 NM_033125 ENSG00000004809 SLC22A16 CT2|FLIPT2|HEL-S-18|OAT6|OCT6|OKB1|dJ261K5.1 solute carrier family 22 member 16 protein-coding 189.307 chr2 194512612 194512827 + 1.30769 NA Intergenic Intergenic 168450 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA 168.385-4 chr13 105776758 105776988 + 1.30769 NA Intergenic (GCTTTT)n|Simple_repeat|Simple_repeat 70043 NR_120418 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA 194.154 chr1 63480978 63481174 + 1.30769 NA intron (NM_001347145, intron 3 of 7) intron (NM_001347145, intron 3 of 7) 42197 NR_045147 23421 Hs.166539 NM_014288 ENSG00000142856 ITGB3BP CENP-R|CENPR|HSU37139|NRIF3|TAP20 integrin subunit beta 3 binding protein protein-coding 212.231 chr20 19344152 19344399 + 1.30769 NA intron (NM_020689, intron 2 of 16) intron (NM_020689, intron 2 of 16) -59679 NR_024564 100130264 Hs.683814 NR_024564 ENSG00000179447 LOC100130264 - uncharacterized LOC100130264 ncRNA 205.385 chr14 68037818 68038079 + 1.30769 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 214356 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 218.384 chr5 98930684 98930907 + 1.30769 NA non-coding (NR_036530, exon 1 of 1) non-coding (NR_036530, exon 1 of 1) -1081 NR_157078 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding 226.615 chr1 43765441 43765707 + 1.30769 NA intron (NM_001270465, intron 2 of 7) intron (NM_001270465, intron 2 of 7) -38231 NR_125986 101929592 NR_125986 ENSG00000229444 LOC101929592 - uncharacterized LOC101929592 ncRNA 181.462 chr14 57465802 57466199 + 1.30769 NA Intergenic Intergenic 27857 NM_001283057 55195 Hs.659706 NM_018168 ENSG00000100557 CCDC198 C14orf105 coiled-coil domain containing 198 protein-coding 155.077-7 chr12 84565833 84565975 + 1.30769 NA Intergenic Intergenic 346895 NM_001146335 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding 164.154-5 chr7 137150476 137150645 + 1.30769 NA intron (NR_046103, intron 1 of 3) intron (NR_046103, intron 1 of 3) 13781 NR_046103 349160 Hs.660713 NR_046103 ENSG00000234352 LOC349160 - uncharacterized LOC349160 ncRNA 178.615-3 chr2 202204468 202204683 + 1.30769 NA intron (NM_001277372, intron 23 of 23) intron (NM_001277372, intron 23 of 23) 34022 NM_001371392 258.154 chr12 80859700 80860006 + 1.30769 NA intron (NR_136887, intron 1 of 5) L1ME4a|LINE|L1 -27224 NR_030348 693202 NR_030348 ENSG00000207763 MIR617 MIRN617|hsa-mir-617 microRNA 617 ncRNA 200.692 chr2 20789925 20790201 + 1.30769 NA intron (NM_001282722, intron 1 of 4) intron (NM_001282722, intron 1 of 4) 33038 NM_001282720 60526 Hs.187823 NM_021925 ENSG00000118961 LDAH C2orf43|hLDAH lipid droplet associated hydrolase protein-coding 243.538-2 chrX 83524669 83524958 + 1.30769 NA Intergenic Intergenic 16523 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding 183.384 chr10 81661987 81662170 + 1.30769 NA Intergenic Intergenic -213116 NM_001370084 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 163.077-3 chr2 41176526 41176807 + 1.30769 NA Intergenic Intergenic -664231 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 601.077 chrUn_KI270466v1 181 1218 + 1.30769 NA NA SAR|Satellite|Satellite NA NA 166.923 chr11 24135274 24135415 + 1.30769 NA Intergenic Intergenic -361709 NM_001252008 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding 196.23-2 chr9 28281270 28281454 + 1.30769 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 437943 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 245.461 chr1 170389747 170390036 + 1.30769 NA Intergenic L1MB3|LINE|L1 -105683 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA 304.308 chr12 29244057 29244634 + 1.30769 NA intron (NM_001271784, intron 1 of 10) intron (NM_001271784, intron 1 of 10) 20679 NM_018099 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 199.615-2 chr10 87585191 87585394 + 1.30769 NA Intergenic L1MC5a|LINE|L1 -74586 NM_001015880 9060 Hs.524491 NM_004670 ENSG00000198682 PAPSS2 ATPSK2|BCYM4|SK2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding 220.154 chr1 39949923 39950143 + 1.30769 NA Intergenic MER21-int|LTR|ERVL -5079 NM_001287808 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding 260.769 chr15 42761325 42761581 + 1.30769 NA intron (NM_173500, intron 13 of 14) L1MA5A|LINE|L1 -24325 NM_138477 146059 Hs.599232 NM_138477 ENSG00000140326 CDAN1 CDA1|CDAI|CDAN1A|DLT|PRO1295 codanin 1 protein-coding 212.077-3 chrX 18598905 18599141 + 1.30769 NA intron (NM_001037343, intron 12 of 21) intron (NM_001037343, intron 12 of 21) 73080 NM_000330 6247 Hs.715725 NM_000330 ENSG00000102104 RS1 RS|XLRS1 retinoschisin 1 protein-coding 282.538 chr8 88279566 88279845 + 1.30769 NA intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 47778 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 215.231-5 chr8 129857617 129857823 + 1.30769 NA intron (NM_001353282, intron 4 of 10) intron (NM_001353282, intron 4 of 10) -71096 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 176.154-7 chr5 82546213 82546445 + 1.30769 NA Intergenic L2a|LINE|L2 266867 NM_001017971 92270 Hs.676227 NM_001017971 ENSG00000205464 ATP6AP1L - ATPase H+ transporting accessory protein 1 like protein-coding 223.153 chr4 59034413 59034585 + 1.30769 NA intron (NR_133942, intron 1 of 1) L1MB7|LINE|L1 20926 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 224.461 chr2 188991117 188991357 + 1.30769 NA intron (NM_000090, intron 11 of 50) intron (NM_000090, intron 11 of 50) -4393 NR_037401 100500837 NR_037401 ENSG00000284180 MIR3606 mir-3606 microRNA 3606 ncRNA 177.154-3 chr14 81983920 81984163 + 1.30769 NA Intergenic Intergenic -240903 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 226.154 chr2 108593121 108593432 + 1.30769 NA intron (NM_001193488, intron 1 of 9) intron (NM_001193488, intron 1 of 9) 4970 NM_004987 3987 Hs.597715 NM_004987 ENSG00000169756 LIMS1 PINCH|PINCH-1|PINCH1 LIM zinc finger domain containing 1 protein-coding 154.231-4 chr2 44450148 44450332 + 1.30769 NA intron (NM_024766, intron 3 of 10) intron (NM_024766, intron 3 of 10) 88293 NM_024766 79823 Hs.468349 NM_024766 ENSG00000143919 CAMKMT C2orf34|CLNMT|CaM KMT|Cam|KMT calmodulin-lysine N-methyltransferase protein-coding 181.539-3 chr4 62058262 62058479 + 1.23077 NA intron (NM_001371343, intron 23 of 23) intron (NM_001371343, intron 23 of 23) 103395 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 195.538-2 chr2 145848413 145848879 + 1.23077 NA Intergenic L1ME4b|LINE|L1 -738411 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 199.077-2 chr20 50584382 50584828 + 1.23077 NA 3' UTR (NM_001278618, exon 9 of 9) 3' UTR (NM_001278618, exon 9 of 9) -1181 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA 281.769 chr4 103985838 103986221 + 1.23077 NA Intergenic MLT-int|LTR|ERVL-MaLR -266044 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding 165.539-2 chr3 114040764 114040927 + 1.23077 NA intron (NR_148531, intron 2 of 14) L1M4|LINE|L1 15681 NM_001353766 57577 Hs.477159 NM_020817 ENSG00000163617 CCDC191 KIAA1407 coiled-coil domain containing 191 protein-coding 173.846-6 chr3 115457416 115457637 + 1.23077 NA Intergenic L1MC3|LINE|L1 -165984 NM_001130064 2596 Hs.134974 NM_002045 ENSG00000172020 GAP43 B-50|PP46 growth associated protein 43 protein-coding 172.077-2 chr2 159421649 159421863 + 1.23077 NA intron (NM_001329858, intron 12 of 36) L1PA16|LINE|L1 -135053 NM_152528 151525 Hs.20848 NM_152528 ENSG00000196151 WDSUB1 UBOX6|WDSAM1 WD repeat, sterile alpha motif and U-box domain containing 1 protein-coding 205.462-2 chr3 184959093 184959356 + 1.23077 NA intron (NM_001009921, intron 36 of 46) LTR49-int|LTR|ERV1 146717 NM_001349295 23355 Hs.269263 NM_015303 ENSG00000156931 VPS8 KIAA0804 VPS8 subunit of CORVET complex protein-coding 309.231 chr5 95961929 95962394 + 1.23077 NA promoter-TSS (NM_012081) promoter-TSS (NM_012081) 160 NR_130776 101929710 NR_130776 ENSG00000251314 LOC101929710 - uncharacterized LOC101929710 ncRNA 155.385-7 chr2 41672974 41673230 + 1.23077 NA Intergenic Intergenic -204453 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 184.615-5 chr6 149780715 149780887 + 1.23077 NA intron (NM_001252050, intron 3 of 6) L1MB7|LINE|L1 31060 NM_001360456 5110 Hs.279257 NM_005389 ENSG00000120265 PCMT1 PIMT protein-L-isoaspartate (D-aspartate) O-methyltransferase protein-coding 219.769 chr7 111258088 111258331 + 1.23077 NA intron (NM_032549, intron 3 of 5) intron (NM_032549, intron 3 of 5) 167082 NM_001099658 54674 Hs.3781 NM_018334 ENSG00000173114 LRRN3 FIGLER5|NLRR-3|NLRR3 leucine rich repeat neuronal 3 protein-coding 188.539-2 chr19 12938744 12938983 + 1.23077 NA intron (NM_004343, intron 1 of 8) CpG 263 NM_004343 811 Hs.515162 NM_004343 ENSG00000179218 CALR CRT|HEL-S-99n|RO|SSA|cC1qR calreticulin protein-coding 218.769-3 chr7 112175340 112175632 + 1.23077 NA intron (NM_001363540, intron 1 of 52) Charlie2b|DNA|hAT-Charlie 30913 NM_014705 9732 Hs.654652 NM_014705 ENSG00000128512 DOCK4 - dedicator of cytokinesis 4 protein-coding 190.308 chr14 51697617 51697824 + 1.23077 NA intron (NM_001042481, intron 3 of 14) L1MA8|LINE|L1 -19563 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding 278.077 chrX 66607002 66607468 + 1.23077 NA intron (NM_021783, intron 2 of 6) L1M4c|LINE|L1 8795 NM_001242310 60401 Hs.302017 NM_021783 ENSG00000131080 EDA2R EDA-A2R|EDAA2R|TNFRSF27|XEDAR ectodysplasin A2 receptor protein-coding 152.923 chr10 36285299 36285666 + 1.23077 NA Intergenic Intergenic 507180 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 243.846 chr5 105876947 105877332 + 1.23077 NA Intergenic MSTC|LTR|ERVL-MaLR 777665 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 167.154 chr17 68756421 68756628 + 1.23077 NA Intergenic Intergenic 128370 NR_110825 101928104 Hs.569826 NR_110825 ENSG00000267659 LINC01482 - long intergenic non-protein coding RNA 1482 ncRNA 178.385-6 chr15 100795507 100795733 + 1.23077 NA Intergenic L1ME1|LINE|L1 -54132 NR_160704 105369201 Hs.612155 NR_160702 ENSG00000272808 LOC105369201 - uncharacterized LOC105369201 ncRNA 263.231 chr6 83913622 83914135 + 1.23077 NA intron (NM_016230, intron 4 of 15) intron (NM_016230, intron 4 of 15) 54189 NM_016230 51167 Hs.5741 NM_016230 ENSG00000065615 CYB5R4 NCB5OR|cb5/cb5R|dJ676J13.1 cytochrome b5 reductase 4 protein-coding 201.846-8 chr6 102892487 102892673 + 1.23077 NA Intergenic Intergenic 1493595 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 226-2 chr2 204183124 204183739 + 1.23077 NA Intergenic L1ME4a|LINE|L1 246683 NM_012092 29851 Hs.56247 NM_012092 ENSG00000163600 ICOS AILIM|CD278|CVID1 inducible T cell costimulator protein-coding 212.923-3 chr7 19811957 19812265 + 1.23077 NA Intergenic MLT2B4|LTR|ERVL -38494 NM_001366627 256130 Hs.487670 NM_152774 ENSG00000173452 TMEM196 - transmembrane protein 196 protein-coding 184 chr3 89231366 89231662 + 1.23077 NA intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 123893 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 225.462-3 chr2 135851048 135851323 + 1.23077 NA intron (NM_005915, intron 13 of 16) intron (NM_005915, intron 13 of 16) -14001 NM_002299 3938 Hs.551506 NM_002299 ENSG00000115850 LCT LAC|LPH|LPH1 lactase protein-coding 224-2 chr7 42596162 42596405 + 1.23077 NA Intergenic L1ME4a|LINE|L1 110164 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA 283.308 chr10 85917440 85917858 + 1.23077 NA intron (NM_017551, intron 4 of 15) intron (NM_017551, intron 4 of 15) 339918 NR_038986 100507470 Hs.585483 NR_038986 ENSG00000234942 GRID1-AS1 - GRID1 antisense RNA 1 ncRNA 171.077-2 chr12 20267114 20267375 + 1.23077 NA Intergenic Intergenic -102001 NM_000921 5139 Hs.386791 NM_000921 ENSG00000172572 PDE3A CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB phosphodiesterase 3A protein-coding 170 chr11 56530294 56530619 + 1.23077 NA Intergenic Intergenic 12801 NM_001005245 219487 Hs.553632 NM_001005245 ENSG00000255223 OR5M11 OR11-199 olfactory receptor family 5 subfamily M member 11 protein-coding 236.385 chr1 168692440 168692765 + 1.23077 NA Intergenic Intergenic 36604 NM_001937 1805 Hs.80552 NM_001937 ENSG00000143196 DPT TRAMP dermatopontin protein-coding 227.923-4 chr5 26824164 26824372 + 1.23077 NA Intergenic Intergenic 214318 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 235.077 chr1 200620932 200621276 + 1.23077 NA promoter-TSS (NM_014875) promoter-TSS (NM_014875) -353 NM_014875 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding 294.462 chr10 71014342 71014780 + 1.23077 NA Intergenic Intergenic 75508 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA 203.154-3 chr5 78160132 78160340 + 1.23077 NA intron (NM_003664, intron 13 of 26) intron (NM_003664, intron 13 of 26) 134462 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding 198.154-2 chr4 167795544 167795962 + 1.23077 NA Intergenic MIR|SINE|MIR -296784 NM_007193 11199 Hs.188401 NM_007193 ENSG00000109511 ANXA10 ANX14 annexin A10 protein-coding 182.231 chr14 48213551 48213817 + 1.23077 NA Intergenic Intergenic -418670 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 312.923 chr2 16714648 16715095 + 1.23077 NA Intergenic Intergenic -49037 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding 259.692 chr6 164606924 164607215 + 1.23077 NA Intergenic L1MEd|LINE|L1 214994 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA 197.692 chr14 72922125 72922461 + 1.23077 NA Intergenic Intergenic -4171 NM_181340 26094 Hs.331491 NM_015604 ENSG00000119599 DCAF4 WDR21|WDR21A DDB1 and CUL4 associated factor 4 protein-coding 192.769-3 chr4 157913935 157914132 + 1.23077 NA Intergenic MLT1N2|LTR|ERVL-MaLR -256719 NR_147409 285505 NR_147407 ENSG00000248429 FAM198B-AS1 - FAM198B antisense RNA 1 ncRNA 195.539 chr14 63933432 63933790 + 1.23077 NA intron (NM_015180, intron 2 of 114) intron (NM_015180, intron 2 of 114) 80607 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding 178.154-5 chr22 48264133 48264368 + 1.23077 NA Intergenic Intergenic -10114 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 231.692 chr18 6197965 6198318 + 1.23077 NA intron (NM_001365769, intron 12 of 16) intron (NM_001365769, intron 12 of 16) -58603 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA 222.846 chr1 110773045 110773356 + 1.23077 NA Intergenic L1MB3|LINE|L1 -97999 NM_001040033 963 Hs.443057 NM_000560 ENSG00000143119 CD53 MOX44|TSPAN25 CD53 molecule protein-coding 242.923-2 chr5 97585921 97586268 + 1.23077 NA intron (NR_105028, intron 2 of 3) intron (NR_105028, intron 2 of 3) 81398 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA 241.385 chr14 64291966 64292166 + 1.23077 NA intron (NR_073496, intron 1 of 7) intron (NR_073496, intron 1 of 7) 2344 NM_001040275 2100 Hs.660607 NM_001437 ENSG00000140009 ESR2 ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8 estrogen receptor 2 protein-coding 167.385-8 chr6 147342084 147342294 + 1.23077 NA intron (NM_001127715, intron 21 of 27) intron (NM_001127715, intron 21 of 27) -137575 NR_034115 729178 Hs.557608 NR_034115 STXBP5-AS1 - STXBP5 antisense RNA 1 ncRNA 154.462-4 chr9 94502530 94502687 + 1.23077 NA Intergenic Intergenic -52437 NR_121569 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA 156.923-11 chr2 139063796 139064027 + 1.23077 NA Intergenic Intergenic 166587 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 225.538 chr14 27895607 27895893 + 1.23077 NA Intergenic (ATATTT)n|Simple_repeat|Simple_repeat -222529 NR_148991 728755 Hs.652058 NR_148991 ENSG00000258932 LOC728755 - uncharacterized LOC728755 ncRNA 180.308-3 chr3 65654032 65654218 + 1.23077 NA intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -239691 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA 241.384 chr14 72307752 72308264 + 1.23077 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -208812 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 216.385 chr6 56863281 56863532 + 1.23077 NA intron (NR_125866, intron 3 of 3) intron (NR_125866, intron 3 of 3) -11490 NM_001144770 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding 210.385 chr8 127701224 127701413 + 1.23077 NA intron (NR_117102, intron 3 of 3) intron (NR_117102, intron 3 of 3) 32649 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA 190.769-5 chr5 180542657 180542851 + 1.23077 NA intron (NM_001370474, intron 1 of 10) intron (NM_001370474, intron 1 of 10) 1100 NM_001370474 57472 Hs.608380 NM_015455 ENSG00000113300 CNOT6 CCR4|Ccr4a CCR4-NOT transcription complex subunit 6 protein-coding 262.923 chr1 90312880 90313190 + 1.23077 NA Intergenic Intergenic 317925 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding 225.692-6 chr2 143520272 143520636 + 1.23077 NA intron (NM_018460, intron 10 of 13) intron (NM_018460, intron 10 of 13) 391035 NM_018460 55843 Hs.171011 NM_018460 ENSG00000075884 ARHGAP15 BM046 Rho GTPase activating protein 15 protein-coding 244.923-2 chr3 15617707 15618040 + 1.23077 NA intron (NM_001281725, intron 1 of 3) L1MC4|LINE|L1 15904 NM_001281725 686 Hs.444197 NM_001281723 ENSG00000169814 BTD - biotinidase protein-coding 285.077 chr6 23782885 23783164 + 1.23077 NA Intergenic Intergenic -343191 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding 153.154-6 chr6 73767762 73767992 + 1.23077 NA intron (NM_001159588, intron 12 of 31) intron (NM_001159588, intron 12 of 31) 71674 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding 306.462 chr4 94678989 94679360 + 1.23077 NA Intergenic Intergenic 78359 NR_121610 100507012 Hs.128612 NR_121610 BMPR1B-DT BMPR1B-AS1 BMPR1B divergent transcript ncRNA 207.308 chr10 64081250 64081679 + 1.23077 NA Intergenic Intergenic -559574 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 184.615-4 chr19 28688402 28688698 + 1.23077 NA intron (NR_110759, intron 5 of 9) intron (NR_110759, intron 5 of 9) 39144 NR_110759 100420587 Hs.569956 NR_110759 ENSG00000283403 LOC100420587 - SHC binding and spindle associated 1 pseudogene pseudo 255.846 chr2 77310833 77311143 + 1.23077 NA intron (NR_146416, intron 1 of 1) (AT)n|Simple_repeat|Simple_repeat 211388 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding 210 chr1 188617061 188617373 + 1.23077 NA Intergenic Intergenic 1173589 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 192.616 chr12 58589398 58589685 + 1.23077 NA intron (NR_120452, intron 3 of 7) intron (NR_120452, intron 3 of 7) -2161 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA 235.692 chr11 98797886 98798175 + 1.23077 NA Intergenic Intergenic -222919 NM_014361 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 252.462 chr5 20962816 20963138 + 1.23077 NA Intergenic Intergenic -347442 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA 202.462-2 chr15 58091459 58091656 + 1.23077 NA Intergenic L1M5|LINE|L1 -25634 NM_001206897 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding 258.154-2 chr2 44779228 44779755 + 1.23077 NA Intergenic Intergenic 159397 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA 153.154-4 chr5 63168666 63168826 + 1.23077 NA Intergenic Intergenic 589927 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 203.923 chr11 81961620 81961801 + 1.23077 NA intron (NR_120571, intron 6 of 7) (TA)n|Simple_repeat|Simple_repeat -70874 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 231.769-3 chr7 8125597 8125832 + 1.23077 NA intron (NR_146928, intron 13 of 14) L2a|LINE|L2 136338 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding 165-3 chr19 4360201 4360382 + 1.23077 NA TTS (NM_001199944) TTS (NM_001199944) 16764 NM_001159846 84954 Hs.321689 NM_032868 ENSG00000008382 MPND - MPN domain containing protein-coding 257.538-2 chr7 53727937 53728697 + 1.23077 NA intron (NR_038371, intron 4 of 5) L1ME3Cz|LINE|L1 83614 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 180.308-2 chr2 199990978 199991152 + 1.23077 NA Intergenic LTR85b|LTR|Gypsy? -35574 NM_001039693 129450 Hs.204619 NM_152382 ENSG00000162971 TYW5 C2orf60|hTYW5 tRNA-yW synthesizing protein 5 protein-coding 231.538 chr4 176678933 176679235 + 1.23077 NA Intergenic Intergenic 113838 NM_005429 7424 Hs.435215 NM_005429 ENSG00000150630 VEGFC Flt4-L|LMPH1D|LMPHM4|VRP vascular endothelial growth factor C protein-coding 242.769 chr14 40599466 40599848 + 1.23077 NA Intergenic (TTTAATA)n|Simple_repeat|Simple_repeat -355054 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 258.385 chr4 32371856 32372253 + 1.23077 NA Intergenic Intergenic 21016 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 259.077 chr8 51569104 51569541 + 1.23077 NA intron (NM_144651, intron 3 of 22) intron (NM_144651, intron 3 of 22) 240123 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding 224.154 chr3 65225868 65226162 + 1.23077 NA Intergenic Intergenic -538015 NM_001318781 56999 Hs.656071 NM_182920 ENSG00000163638 ADAMTS9 - ADAM metallopeptidase with thrombospondin type 1 motif 9 protein-coding 160.154-15 chr8 124104073 124104236 + 1.23077 NA intron (NM_001039112, intron 39 of 40) intron (NM_001039112, intron 39 of 40) -63372 NR_040044 439941 Hs.683919 NM_001038706 ENSG00000181171 FER1L6-AS1 C8orf54 FER1L6 antisense RNA 1 ncRNA 271.154 chr2 137893358 137893718 + 1.23077 NA intron (NR_120402, intron 2 of 2) intron (NR_120402, intron 2 of 2) 34394 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA 206.615 chr1 105135186 105135726 + 1.23077 NA Intergenic Intergenic 483479 NR_125954 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA 269.692-2 chr8 137927567 137927821 + 1.23077 NA intron (NR_161374, intron 2 of 7) L2a|LINE|L2 155851 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 237.538 chr10 90715376 90715762 + 1.23077 NA Intergenic Intergenic 142470 NM_019859 3363 Hs.73739 NM_000872 ENSG00000148680 HTR7 5-HT7 5-hydroxytryptamine receptor 7 protein-coding 322.923 chr17 55683363 55683721 + 1.23077 NA Intergenic Intergenic 39322 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding 256.846 chr12 123248206 123248551 + 1.23077 NA intron (NM_001194995, intron 1 of 2) L1PBa1|LINE|L1 14634 NM_001143905 91574 Hs.319128 NM_152269 ENSG00000130921 C12orf65 COXPD7|SPG55 chromosome 12 open reading frame 65 protein-coding 271 chr11 103812950 103813425 + 1.23077 NA Intergenic Intergenic -36719 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA 242.154-2 chr5 58045492 58045748 + 1.23077 NA Intergenic Intergenic 76721 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA 266.231 chr10 4630157 4630413 + 1.23077 NA Intergenic Intergenic -25871 NR_015425 338588 Hs.121365 NR_015425 LINC00705 - long intergenic non-protein coding RNA 705 ncRNA 190.769-3 chr17 71350369 71350745 + 1.23077 NA Intergenic MER20|DNA|hAT-Charlie -148378 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 231.385-3 chr4 64938923 64939170 + 1.23077 NA intron (NR_033976, intron 4 of 6) intron (NR_033976, intron 4 of 6) 65454 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA 220.154-5 chr4 109281764 109282012 + 1.23077 NA intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 20770 NM_032518 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding 214.615 chr16 52238433 52238770 + 1.23077 NA Intergenic MER5B|DNA|hAT-Charlie -19963 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA 233.539 chr20 18205076 18205391 + 1.23077 NA Intergenic L1MC|LINE|L1 60134 NR_028402 57325 Hs.488051 NM_020536 ENSG00000149474 KAT14 ATAC2|CRP2BP|CSRP2BP|PRO1194|dJ717M23.1 lysine acetyltransferase 14 protein-coding 194.462 chr1 37200355 37200580 + 1.23077 NA Intergenic L1MA9|LINE|L1 38904 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA 364.923 chr4 66394209 66394646 + 1.23077 NA Intergenic L1MC5a|LINE|L1 117603 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 167.538-6 chr2 203444799 203445174 + 1.23077 NA exon (NM_213589, exon 13 of 14) exon (NM_213589, exon 13 of 14) 78102 NM_001282927 10152 Hs.471156 NM_005759 ENSG00000138443 ABI2 ABI-2|ABI2B|AIP-1|AIP1|AblBP3|SSH3BP2|argBP1|argBPIA|argBPIB abl interactor 2 protein-coding 188.308-5 chr5 30419162 30419390 + 1.23077 NA Intergenic Intergenic 538716 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 254.154 chr3 107276822 107277208 + 1.23077 NA intron (NR_028302, intron 1 of 3) L1ME1|LINE|L1 36323 NR_028301 344595 Hs.543039 NR_028301 ENSG00000243701 DUBR DUM|LINC00883|LINC0883 DPPA2 upstream binding RNA ncRNA 287.231 chr8 86411218 86411508 + 1.23077 NA intron (NM_007013, intron 8 of 24) intron (NM_007013, intron 8 of 24) 68816 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding 187.923-4 chr18 2947536 2947832 + 1.23077 NA intron (NM_014646, intron 4 of 19) intron (NM_014646, intron 4 of 19) -1061 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo 238.923 chr14 22167469 22167934 + 1.23077 NA Intergenic L2c|LINE|L2 265052 NR_148362 105370401 Hs.435144 NR_148361 LOC105370401 - uncharacterized LOC105370401 ncRNA 253.308 chr2 206779813 206780130 + 1.23077 NA intron (NM_001136193, intron 7 of 11) L1MB1|LINE|L1 -3263 NR_036078 100423002 NR_036078 ENSG00000263468 MIR3130-2 MIR3130-4|mir-3130-2 microRNA 3130-2 ncRNA 254.077 chr17 65900880 65901282 + 1.23077 NA intron (NM_001353129, intron 20 of 26) intron (NM_001353129, intron 20 of 26) -74538 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 170.385-4 chr3 117345932 117346196 + 1.23077 NA Intergenic L2c|LINE|L2 344861 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 256.385 chr17 8119827 8120299 + 1.23077 NA TTS (NM_001165967) TTS (NM_001165967) -1147 NM_001165960 59344 Hs.232770 NM_021628 ENSG00000179148 ALOXE3 ARCI3|E-LOX|eLOX-3|eLOX3 arachidonate lipoxygenase 3 protein-coding 233.616 chr14 75624395 75624749 + 1.23077 NA intron (NM_017791, intron 2 of 9) intron (NM_017791, intron 2 of 9) 19032 NM_001195283 55640 Hs.509966 NM_017791 ENSG00000119686 FLVCR2 C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH|SLC49A2 feline leukemia virus subgroup C cellular receptor family member 2 protein-coding 306.923-2 chr8 62723223 62723583 + 1.23077 NA intron (NM_001304533, intron 3 of 6) intron (NM_001304533, intron 3 of 6) -254458 NR_027378 643763 Hs.491856 NM_001039769 ENSG00000274956 NKAIN3-IT1 UG0898H09 NKAIN3 intronic transcript ncRNA 247.462-3 chr5 45408972 45409402 + 1.23077 NA intron (NM_021072, intron 3 of 7) intron (NM_021072, intron 3 of 7) 287193 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 173.539 chr3 20763698 20763947 + 1.23077 NA Intergenic Intergenic 421354 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA 171.692-4 chr2 37201074 37201256 + 1.23077 NA TTS (NM_005760) TTS (NM_005760) 4669 NM_001322373 100505876 Hs.666958 NM_001322373 ENSG00000218739 CEBPZOS CEBPZ-AS1 CEBPZ opposite strand protein-coding 202.769 chr15 65819941 65820225 + 1.23077 NA Intergenic L2c|LINE|L2 -27790 NM_001320835 10260 Hs.654567 NM_005848 ENSG00000174485 DENND4A IRLB|MYCPBP DENN domain containing 4A protein-coding 228.769-3 chr4 122085576 122085936 + 1.23077 NA Intergenic Intergenic -84847 NM_015312 84162 Hs.408142 NM_015312 ENSG00000138688 KIAA1109 ALKKUCS|FSA|Tweek KIAA1109 protein-coding 205.385-4 chr4 39323654 39323877 + 1.23077 NA intron (NM_001204747, intron 6 of 24) intron (NM_001204747, intron 6 of 24) 42597 NM_001363495 5981 Hs.507475 NM_002913 ENSG00000035928 RFC1 A1|CANVAS|MHCBFB|PO-GA|RECC1|RFC|RFC140 replication factor C subunit 1 protein-coding 238.769 chr7 119852448 119852746 + 1.23077 NA intron (NR_131960, intron 1 of 4) intron (NR_131960, intron 1 of 4) 54778 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA 184.769-2 chr13 51153319 51153529 + 1.23077 NA intron (NR_102431, intron 1 of 4) MER45C|DNA|hAT-Tip100 18798 NR_102432 647166 Hs.195052 NM_001351589 ENSG00000226792 C13orf42 LINC00371|LINC00372 chromosome 13 open reading frame 42 protein-coding 190-2 chr11 60282952 60283470 + 1.23077 NA intron (NM_024021, intron 2 of 7) AluJb|SINE|Alu 2545 NM_001243266 51338 Hs.325960 NM_024021 ENSG00000110079 MS4A4A 4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7 membrane spanning 4-domains A4A protein-coding 303.538-2 chr4 63696096 63696506 + 1.23077 NA Intergenic Intergenic 713149 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 216.846-3 chr9 29097004 29097284 + 1.23077 NA intron (NM_001354574, intron 1 of 5) Charlie21a|DNA|hAT-Charlie 115155 NM_001354575 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 185.615-2 chr10 48544920 48545186 + 1.23077 NA intron (NR_144642, intron 3 of 9) Charlie5|DNA|hAT-Charlie -33464 NR_146782 100689073 Hs.667964 NR_146782 ARHGAP22-IT1 - ARHGAP22 intronic transcript 1 ncRNA 194.615-2 chr2 22724476 22724826 + 1.23077 NA Intergenic L1MA7|LINE|L1 188172 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 308.923 chr4 120158773 120159048 + 1.23077 NA Intergenic Intergenic -92062 NM_002358 4085 Hs.591697 NM_002358 ENSG00000164109 MAD2L1 HSMAD2|MAD2 mitotic arrest deficient 2 like 1 protein-coding 217.154-4 chr5 122094044 122094241 + 1.23077 NA Intergenic Intergenic -15883 NM_002317 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding 193.615-7 chr9 86973298 86973593 + 1.23077 NA intron (NR_049794, intron 2 of 6) intron (NR_049794, intron 2 of 6) 24747 NR_049794 100506834 Hs.553987 NR_049794 ENSG00000226237 GAS1RR LncRNA-Hh GAS1 adjacent regulatory RNA ncRNA 166.923-2 chr13 74896902 74897171 + 1.23077 NA Intergenic Charlie7|DNA|hAT-Charlie 343345 NR_027466 647288 Hs.567920 NR_027466 ENSG00000214249 CTAGE11P - CTAGE family member 11, pseudogene pseudo 168.308-11 chr9 77527360 77527574 + 1.23077 NA TTS (NR_121184) TTS (NR_121184) 79818 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA 269.692 chr12 74993146 74993552 + 1.23077 NA Intergenic Intergenic 216399 NM_139136 3747 Hs.27214 NM_139136 ENSG00000166006 KCNC2 KV3.2 potassium voltage-gated channel subfamily C member 2 protein-coding 175.769-4 chr2 110152638 110152875 + 1.23077 NA intron (NM_207181, intron 11 of 19) L1MEi|LINE|L1 -36190 NM_005434 7851 Hs.185055 NM_005434 ENSG00000144063 MALL BENE mal, T cell differentiation protein like protein-coding 157.539-3 chr2 15107504 15107698 + 1.23077 NA Intergenic Intergenic 453733 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 197.231 chr10 20130742 20130942 + 1.23077 NA intron (NM_032812, intron 4 of 13) L1MA9|LINE|L1 314410 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding 189.077-6 chr8 62435404 62435695 + 1.23077 NA intron (NM_001304533, intron 1 of 6) intron (NM_001304533, intron 1 of 6) 186695 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding 171.154-4 chr20 10467597 10467795 + 1.23077 NA intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 32391 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding 243.462 chr5 15323170 15323513 + 1.23077 NA Intergenic L1MEf|LINE|L1 -56781 NR_109944 101929454 Hs.453273 NR_109944 LINC02149 - long intergenic non-protein coding RNA 2149 ncRNA 245.308 chr12 119805628 119805892 + 1.23077 NA intron (NM_007174, intron 9 of 46) intron (NM_007174, intron 9 of 46) 71560 NM_007174 11113 Hs.119594 NM_007174 ENSG00000122966 CIT CITK|CRIK|MCPH17|STK21 citron rho-interacting serine/threonine kinase protein-coding 194.308-5 chr7 43093412 43093659 + 1.23077 NA Intergenic L1M5|LINE|L1 -19112 NM_001287059 23072 Hs.164453 NM_015052 ENSG00000002746 HECW1 NEDL1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 protein-coding 173.154-4 chr17 66100685 66100872 + 1.23077 NA intron (NM_001353129, intron 6 of 26) MER2|DNA|TcMar-Tigger 91114 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 211.462 chr8 67090624 67090976 + 1.23077 NA intron (NM_001363133, intron 4 of 27) L2c|LINE|L2 6952 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding 297.231 chr21 30604804 30605686 + 1.23077 NA Intergenic L1M1|LINE|L1 4158 NM_181620 337979 Hs.553700 NM_181620 ENSG00000186924 KRTAP22-1 KAP22.1 keratin associated protein 22-1 protein-coding 251.154 chr21 27058997 27059417 + 1.23077 NA Intergenic Intergenic -92119 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 183.231-5 chr15 70567930 70568190 + 1.23077 NA Intergenic Zaphod|DNA|hAT-Tip100 18546 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA 152.615-4 chr3 85480011 85480413 + 1.23077 NA intron (NM_001167674, intron 1 of 9) intron (NM_001167674, intron 1 of 9) -24847 NM_001256504 253559 Hs.164578 NM_153184 ENSG00000175161 CADM2 IGSF4D|NECL3|Necl-3|SynCAM 2|synCAM2 cell adhesion molecule 2 protein-coding 260.616 chr12 18667337 18667604 + 1.23077 NA Intergenic Intergenic 70039 NM_001330769 89869 Hs.97542 NM_033123 ENSG00000139151 PLCZ1 NYD-SP27|PLC-zeta-1|PLCzeta|SPGF17 phospholipase C zeta 1 protein-coding 221.615 chr10 51995028 51995398 + 1.23077 NA intron (NM_001098512, intron 5 of 17) intron (NM_001098512, intron 5 of 17) -295618 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding 243.385 chr7 129963324 129963637 + 1.23077 NA Intergenic L2a|LINE|L2 -10520 NM_001202498 7328 Hs.643548 NM_003344 ENSG00000186591 UBE2H E2-20K|GID3|UBC8|UBCH|UBCH2 ubiquitin conjugating enzyme E2 H protein-coding 181.231-2 chr14 44294650 44294929 + 1.23077 NA Intergenic Intergenic 212494 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 303.231 chr11 76171432 76171718 + 1.23077 NA Intergenic Intergenic 34927 NM_004626 7481 Hs.108219 NM_004626 ENSG00000085741 WNT11 HWNT11 Wnt family member 11 protein-coding 164.539-2 chr4 121511973 121512126 + 1.23077 NA Intergenic L1P4|LINE|L1 -131031 NM_198179 84109 Hs.368977 NM_198179 ENSG00000186867 QRFPR AQ27|GPR103|SP9155 pyroglutamylated RFamide peptide receptor protein-coding 181.539-2 chr2 156488287 156488527 + 1.23077 NA intron (NM_000408, intron 2 of 16) intron (NM_000408, intron 2 of 16) 52028 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding 321.846 chr11 31920255 31920606 + 1.23077 NA Intergenic Intergenic 93863 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA 268.769 chr12 110104585 110104869 + 1.23077 NA Intergenic MLT1K|LTR|ERVL-MaLR -19630 NM_031473 28981 Hs.528382 NM_014055 ENSG00000122970 IFT81 CDV-1|CDV-1R|CDV1|CDV1R|DV1|SRTD19 intraflagellar transport 81 protein-coding 193.462 chr2 125598547 125598751 + 1.23077 NA Intergenic L1PB4|LINE|L1 519336 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 285.538 chr21 36795223 36795704 + 1.23077 NA intron (NM_001352515, intron 6 of 10) intron (NM_001352515, intron 6 of 10) 96348 NM_009586 6493 Hs.146186 NM_005069 ENSG00000159263 SIM2 HMC13F06|HMC29C01|SIM|bHLHe15 SIM bHLH transcription factor 2 protein-coding 218.077-5 chr20 34756710 34756943 + 1.23077 NA intron (NM_001242539, intron 5 of 11) intron (NM_001242539, intron 5 of 11) 25578 NM_001242539 23054 Hs.368971 NM_014071 ENSG00000198646 NCOA6 AIB3|ASC2|NRC|PRIP|RAP250|TRBP nuclear receptor coactivator 6 protein-coding 210.462-2 chr2 124748241 124748539 + 1.23077 NA intron (NM_130773, intron 14 of 23) intron (NM_130773, intron 14 of 23) 723103 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 153.231-12 chr3 120671071 120671248 + 1.23077 NA intron (NM_000187, intron 3 of 13) intron (NM_000187, intron 3 of 13) 11080 NM_000187 3081 Hs.368254 NM_000187 ENSG00000113924 HGD AKU|HGO homogentisate 1,2-dioxygenase protein-coding 161.154-9 chr7 50300656 50300913 + 1.23077 NA Intergenic Intergenic -3280 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 227.769 chr10 34152121 34152323 + 1.23077 NA intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -379542 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 177.23-2 chr5 165033401 165033625 + 1.23077 NA Intergenic (AGT)n|Simple_repeat|Simple_repeat 563234 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA 194.462-2 chr1 105704007 105704238 + 1.23077 NA Intergenic L2|LINE|L2 -85187 NR_125955 101928476 Hs.563856 NR_125954 ENSG00000230768 LINC01676 - long intergenic non-protein coding RNA 1676 ncRNA 296.692 chr2 109055095 109055348 + 1.23077 NA Intergenic L1ME2z|LINE|L1 -66001 NM_022336 10913 Hs.171971 NM_022336 ENSG00000135960 EDAR DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1 ectodysplasin A receptor protein-coding 190.154-6 chr3 103127903 103128120 + 1.23077 NA Intergenic Intergenic 396105 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 169.923-3 chr19 36182749 36182947 + 1.23077 NA exon (NM_152477, exon 5 of 5) exon (NM_152477, exon 5 of 5) -30401 NM_001864 1346 Hs.421621 NM_001864 ENSG00000161281 COX7A1 COX7A|COX7AH|COX7AM cytochrome c oxidase subunit 7A1 protein-coding 156.538-6 chrX 122163718 122163952 + 1.23077 NA Intergenic L1M2a|LINE|L1 792863 NR_037444 100500869 NR_037444 ENSG00000265456 MIR3672 - microRNA 3672 ncRNA 216.923 chr1 183847154 183847405 + 1.23077 NA intron (NM_001297671, intron 2 of 17) AluJo|SINE|Alu 42159 NM_001297671 23179 Hs.497148 NM_015149 ENSG00000143344 RGL1 RGL ral guanine nucleotide dissociation stimulator like 1 protein-coding 173.846-9 chr8 132155382 132155692 + 1.23077 NA intron (NM_001204824, intron 9 of 14) MIR|SINE|MIR -50272 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding 218.231-2 chr12 42094733 42095008 + 1.23077 NA intron (NM_173601, intron 7 of 7) L1MB7|LINE|L1 50004 NM_001099650 283464 Hs.259347 NM_173601 ENSG00000151233 GXYLT1 GLT8D3 glucoside xylosyltransferase 1 protein-coding 159.385-5 chr5 148784539 148784734 + 1.23077 NA Intergenic MLT1C-int|LTR|ERVL-MaLR -41957 NM_000024 154 Hs.2551 NM_000024 ENSG00000169252 ADRB2 ADRB2R|ADRBR|B2AR|BAR|BETA2AR adrenoceptor beta 2 protein-coding 201.308-5 chr2 33923825 33923991 + 1.23077 NA intron (NR_126403, intron 2 of 5) intron (NR_126403, intron 2 of 5) -143318 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 227.846-2 chr3 120270823 120271257 + 1.23077 NA Intergenic L1MEg|LINE|L1 -26745 NM_153002 165829 Hs.333358 NM_153002 ENSG00000175697 GPR156 GABABL|PGR28 G protein-coupled receptor 156 protein-coding 191.231-4 chr21 24479607 24479904 + 1.23077 NA intron (NR_135520, intron 4 of 5) L1MB1|LINE|L1 51015 NR_135521 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA 205.385-2 chr2 63270206 63270414 + 1.23077 NA intron (NR_148704, intron 14 of 18) L1M5|LINE|L1 -150768 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 157.769-3 chr4 65502832 65502994 + 1.23077 NA intron (NM_001281767, intron 3 of 16) L1PA16|LINE|L1 166575 NM_001318761 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding 259.538 chr2 33616151 33616590 + 1.23077 NA Intergenic HUERS-P1-int|LTR|ERV1 -17008 NM_001304538 25940 Hs.468140 NM_015475 ENSG00000119812 FAM98A - family with sequence similarity 98 member A protein-coding 196.462-3 chr21 30342425 30342651 + 1.23077 NA Intergenic Intergenic -4844 NM_001077711 643812 Hs.580881 NM_001077711 ENSG00000206107 KRTAP27-1 - keratin associated protein 27-1 protein-coding 276.615-2 chr11 26047258 26047615 + 1.23077 NA Intergenic Intergenic -141687 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding 208-4 chr7 52677763 52677976 + 1.23077 NA Intergenic L1MEd|LINE|L1 -357764 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 250.846 chr18 1428408 1428774 + 1.23077 NA Intergenic Arthur1|DNA|hAT-Tip100 -68962 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 241-2 chr18 7972962 7973233 + 1.23077 NA intron (NM_002845, intron 7 of 30) L1ME3G|LINE|L1 393937 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA 242.539 chr8 83432220 83432420 + 1.23077 NA Intergenic Intergenic 28562 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 152.154-15 chr8 134600031 134600277 + 1.23077 NA intron (NR_002438, intron 1 of 1) intron (NR_002438, intron 1 of 1) 2083 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 177.769-6 chr4 161536626 161537033 + 1.23077 NA intron (NM_020116, intron 10 of 15) intron (NM_020116, intron 10 of 15) -485904 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA 213.462 chr1 147900421 147900739 + 1.23077 NA Intergenic Intergenic -2215 NM_005267 2703 Hs.632441 NM_005267 ENSG00000121634 GJA8 CAE|CAE1|CTRCT1|CX50|CZP1|MP70 gap junction protein alpha 8 protein-coding 286.154 chr4 91622265 91622616 + 1.23077 NA Intergenic Intergenic 654862 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 313.539 chr5 87310306 87310649 + 1.23077 NA TTS (NM_001364075) TTS (NM_001364075) 13151 NR_130929 644285 Hs.709256 NR_130929 LOC644285 - uncharacterized LOC644285 ncRNA 175.077-8 chr6 48146273 48146630 + 1.23077 NA Intergenic Intergenic -77762 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 260.231 chr1 248612540 248612862 + 1.23077 NA Intergenic L1PREC2|LINE|L1 14427 NM_001001964 127077 Hs.626619 NM_001001964 ENSG00000279301 OR2T11 OR2T11Q olfactory receptor family 2 subfamily T member 11 (gene/pseudogene) protein-coding 252.307-2 chr22 38555146 38555591 + 1.23077 NA exon (NM_001278208, exon 5 of 11) exon (NM_001278208, exon 5 of 11) 13041 NM_001278208 11144 Hs.339396 NM_007068 ENSG00000100206 DMC1 DMC1H|LIM15|dJ199H16.1 DNA meiotic recombinase 1 protein-coding 233.462 chr12 22659411 22659682 + 1.23077 NA intron (NM_018638, intron 3 of 7) MIR|SINE|MIR 34375 NM_018638 55500 Hs.29464 NM_018638 ENSG00000139163 ETNK1 EKI|EKI 1|EKI1|Nbla10396 ethanolamine kinase 1 protein-coding 249.692 chr11 80635099 80635370 + 1.23077 NA Intergenic Intergenic 127569 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 199.385-3 chr2 23745586 23745783 + 1.23077 NA Intergenic MIR|SINE|MIR 181439 NR_125717 54454 Hs.467862 NM_017552 ENSG00000119778 ATAD2B - ATPase family AAA domain containing 2B protein-coding 356 chr2 187448877 187449297 + 1.23077 NA promoter-TSS (NM_001271751) promoter-TSS (NM_001271751) -835 NM_005795 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding 162.231-3 chr15 52042160 52042350 + 1.15385 NA intron (NM_002748, intron 1 of 5) intron (NM_002748, intron 1 of 5) 23036 NM_002748 5597 Hs.411847 NM_002748 ENSG00000069956 MAPK6 ERK3|HsT17250|PRKM6|p97MAPK mitogen-activated protein kinase 6 protein-coding 205.385-5 chr8 105748079 105748493 + 1.15385 NA intron (NM_001362837, intron 5 of 7) intron (NM_001362837, intron 5 of 7) 312217 NR_125796 102723356 Hs.571413 NR_125796 ZFPM2-AS1 SCAT3 ZFPM2 antisense RNA 1 ncRNA 170.769-3 chr12 25492976 25493266 + 1.15385 NA intron (NM_152590, intron 8 of 8) intron (NM_152590, intron 8 of 8) 60162 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding 195.001 chr8 9768933 9769130 + 1.15385 NA intron (NM_003747, intron 25 of 26) intron (NM_003747, intron 25 of 26) 27359 NR_030327 693182 NR_030327 ENSG00000207701 MIR597 MIRN597|hsa-mir-597|mir-597 microRNA 597 ncRNA 184.615 chr11 68739184 68739485 + 1.15385 NA intron (NM_001039656, intron 5 of 5) intron (NM_001039656, intron 5 of 5) 12186 NM_004923 9633 Hs.145932 NM_004923 ENSG00000132749 TESMIN CXCDC2|MTL5|MTLT testis expressed metallothionein like protein protein-coding 236.231-2 chr6 162354538 162354910 + 1.15385 NA intron (NM_004562, intron 2 of 11) intron (NM_004562, intron 2 of 11) -372408 NM_152410 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding 225.462 chr14 53871514 53871780 + 1.15385 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 76837 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA 298.078 chr3 122033033 122033373 + 1.15385 NA Intergenic L1ME3A|LINE|L1 -10956 NM_001199800 286676 Hs.98484 NM_175924 ENSG00000145103 ILDR1 DFNB42|ILDR1alpha|ILDR1alpha'|ILDR1beta immunoglobulin like domain containing receptor 1 protein-coding 204.231-7 chr9 82797797 82798001 + 1.15385 NA Intergenic Intergenic 265243 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 312.693 chr17 60058662 60059108 + 1.15385 NA intron (NM_022070, intron 11 of 19) intron (NM_022070, intron 11 of 19) -15780 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA 231.616-3 chr8 70605654 70605918 + 1.15385 NA intron (NM_001317804, intron 2 of 11) intron (NM_001317804, intron 2 of 11) 1883 NM_001317805 23471 Hs.491988 NM_014294 ENSG00000067167 TRAM1 PNAS8|TRAM|TRAMP translocation associated membrane protein 1 protein-coding 240.155 chr22 27770944 27771174 + 1.15385 NA intron (NM_002430, intron 1 of 1) MIR|SINE|MIR 30697 NM_002430 4330 Hs.268515 NM_002430 ENSG00000169184 MN1 MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 MN1 proto-oncogene, transcriptional regulator protein-coding 200.847 chr15 62697290 62697520 + 1.15385 NA intron (NM_015059, intron 11 of 55) AluJr|SINE|Alu 50094 NM_015059 83660 Hs.569438 NM_015059 ENSG00000171914 TLN2 ILWEQ talin 2 protein-coding 176.077-7 chr6 136314837 136315058 + 1.15385 NA Intergenic AluJb|SINE|Alu -25096 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding 170.539 chr16 77213859 77214017 + 1.15385 NA TTS (NM_001348924) TTS (NM_001348924) 14530 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding 177.616 chr12 38984919 38985204 + 1.15385 NA Intergenic Intergenic -79470 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding 166.923-4 chr4 31870015 31870221 + 1.15385 NA Intergenic Intergenic -127261 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 176.77 chr9 97731647 97731844 + 1.15385 NA intron (NR_147055, intron 5 of 10) AluJb|SINE|Alu -34336 NM_001354975 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding 155.538-14 chr7 10916705 10916950 + 1.15385 NA Intergenic MLT1I|LTR|ERVL-MaLR 23326 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding 187.847 chr2 193990337 193990558 + 1.15385 NA Intergenic Intergenic -353822 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA 170.077-8 chr6 143160661 143160866 + 1.15385 NA intron (NM_001366353, intron 2 of 4) intron (NM_001366353, intron 2 of 4) -4019 NM_001366361 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding 171.385 chr1 8754548 8754920 + 1.15385 NA intron (NM_001042681, intron 1 of 22) intron (NM_001042681, intron 1 of 22) 62906 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding 175.385 chr1 212744261 212744496 + 1.15385 NA intron (NM_015471, intron 4 of 5) L1M4|LINE|L1 -44538 NM_018664 55509 Hs.62919 NM_018664 ENSG00000123685 BATF3 JDP1|JUNDM1|SNFT basic leucine zipper ATF-like transcription factor 3 protein-coding 207.538 chr1 102614158 102614655 + 1.15385 NA Intergenic L1P4a|LINE|L1 494090 NM_001190709 1301 Hs.523446 NM_001854 ENSG00000060718 COL11A1 CO11A1|COLL6|STL2 collagen type XI alpha 1 chain protein-coding 203.769-3 chr18 68135845 68136162 + 1.15385 NA Intergenic Intergenic -321181 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA 188.231-7 chr8 132806327 132806799 + 1.15385 NA intron (NM_198513, intron 7 of 7) intron (NM_198513, intron 7 of 7) 31175 NM_016018 51105 Hs.304362 NM_016018 ENSG00000129292 PHF20L1 CGI-72|TDRD20B|URLC1 PHD finger protein 20 like 1 protein-coding 152.539-3 chr5 97099929 97100081 + 1.15385 NA intron (NM_153234, intron 4 of 5) intron (NM_153234, intron 4 of 5) 42606 NM_153234 167410 Hs.656702 NM_153234 ENSG00000145721 LIX1 C5orf11|Lft limb and CNS expressed 1 protein-coding 296.385 chr7 113457938 113458362 + 1.15385 NA Intergenic Intergenic -339568 NM_001352687 401397 Hs.117929 NM_001352687 ENSG00000214194 SMIM30 LINC00998 small integral membrane protein 30 protein-coding 257.769 chr2 111510 111959 + 1.15385 NA Intergenic MIRb|SINE|MIR -65229 NM_001077710 642273 Hs.8379 NM_001077710 ENSG00000184731 FAM110C - family with sequence similarity 110 member C protein-coding 166.231-3 chr5 33365875 33366143 + 1.15385 NA Intergenic MIR3|SINE|MIR -74687 NM_001258437 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding 227.847 chr6 2056438 2056669 + 1.15385 NA intron (NM_001253846, intron 4 of 10) intron (NM_001253846, intron 4 of 10) 119438 NM_001253846 2762 Hs.144496 NM_001500 ENSG00000112699 GMDS GMD|SDR3E1 GDP-mannose 4,6-dehydratase protein-coding 195.308-3 chr8 112013667 112013940 + 1.15385 NA Intergenic L1ME1|LINE|L1 -629690 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 248.231-2 chr9 101653761 101654111 + 1.15385 NA intron (NM_133445, intron 3 of 8) intron (NM_133445, intron 3 of 8) -58967 NM_147180 5535 Hs.151167 NM_147180 ENSG00000188386 PPP3R2 PPP3RL protein phosphatase 3 regulatory subunit B, beta protein-coding 182.616-2 chr4 61183359 61183603 + 1.15385 NA Intergenic Intergenic -17749 NM_001371346 220.846 chr10 126365854 126366230 + 1.15385 NA intron (NM_001288974, intron 1 of 18) L1M5|LINE|L1 22435 NM_001288973 8038 Hs.594351 NM_003474 ENSG00000148848 ADAM12 ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA ADAM metallopeptidase domain 12 protein-coding 226.539 chr4 36769121 36769458 + 1.15385 NA Intergenic Intergenic -127389 NR_149124 105374400 Hs.570781 NR_149124 ENSG00000248215 LINC02505 - long intergenic non-protein coding RNA 2505 ncRNA 197.616 chr8 144255752 144256069 + 1.15385 NA intron (NM_001288814, intron 33 of 41) intron (NM_001288814, intron 33 of 41) 6827 NR_107057 102465906 NR_107057 ENSG00000284054 MIR7112 MIR7112-1|MIR7112-2|hsa-mir-7112|hsa-mir-7112-1|hsa-mir-7112-2 microRNA 7112 ncRNA 182.924 chr2 143569570 143569861 + 1.15385 NA intron (NM_018460, intron 11 of 13) L2a|LINE|L2 -367352 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 211.154-2 chr17 51932332 51932612 + 1.15385 NA intron (NM_001082533, intron 3 of 9) intron (NM_001082533, intron 3 of 9) 226242 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding 174.693 chr9 16886764 16887072 + 1.15385 NA Intergenic Intergenic -16248 NM_017637 54796 Hs.656581 NM_017637 ENSG00000173068 BNC2 BSN2 basonuclin 2 protein-coding 232.616 chr4 44359277 44359486 + 1.15385 NA intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 89428 NM_198353 386617 Hs.479644 NM_198353 ENSG00000183783 KCTD8 - potassium channel tetramerization domain containing 8 protein-coding 162.616 chr2 33425121 33425309 + 1.15385 NA Intergenic Intergenic 6699 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA 165.846-5 chr3 17109871 17110112 + 1.15385 NA Intergenic MER2|DNA|TcMar-Tigger 176795 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA 209.615-2 chr20 44513455 44513796 + 1.15385 NA intron (NM_006811, intron 2 of 9) intron (NM_006811, intron 2 of 9) 8445 NM_006811 10955 Hs.272168 NM_006811 ENSG00000132824 SERINC3 AIGP1|DIFF33|SBBI99|TDE|TDE1|TMS-1 serine incorporator 3 protein-coding 224.539-2 chr3 157657759 157657977 + 1.15385 NA Intergenic MER2B|DNA|TcMar-Tigger 114524 NM_001130002 152078 Hs.259046 NM_001099777 ENSG00000174899 SLC66A1L C3orf55|PQLC2L|SLC66A2L solute carrier family 66 member 1 like protein-coding 199.846 chr11 38329522 38329806 + 1.15385 NA Intergenic Intergenic 316692 NR_120554 103312105 Hs.641711 NR_120554 ENSG00000255175 LINC02759 - long intergenic non-protein coding RNA 2759 ncRNA 176.077-8 chr8 38963412 38963656 + 1.15385 NA intron (NM_021623, intron 10 of 11) Charlie4z|DNA|hAT-Charlie -10694 NM_153692 203100 Hs.661014 NM_153692 ENSG00000169495 HTRA4 - HtrA serine peptidase 4 protein-coding 184.616-2 chr8 131703246 131703540 + 1.15385 NA Intergenic L2b|LINE|L2 -200700 NM_015137 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 167.769-3 chr2 188809666 188809925 + 1.15385 NA Intergenic ERVL-E-int|LTR|ERVL -19672 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA 170.693 chr16 10153250 10153516 + 1.15385 NA intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 28684 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding 224.693 chr1 109384241 109384676 + 1.15385 NA intron (NM_002959, intron 1 of 19) Tigger15a|DNA|TcMar-Tigger 8899 NM_001205228 6272 Hs.485195 NM_002959 ENSG00000134243 SORT1 Gp95|LDLCQ6|NT3|NTR3 sortilin 1 protein-coding 207.846 chr10 14420788 14421093 + 1.15385 NA Intergenic L1MC4|LINE|L1 -15636 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA 260.231-2 chr2 121458671 121459073 + 1.15385 NA exon (NM_001142274, exon 13 of 38) exon (NM_001142274, exon 13 of 38) -72008 NR_023343 100151683 Hs.689638 NR_023343 ENSG00000264229 RNU4ATAC MOPD1|RFMN|RNU4ATAC1|TALS|U4ATAC RNA, U4atac small nuclear (U12-dependent splicing) snRNA 158.462-7 chr4 54146191 54146414 + 1.15385 NA Intergenic Intergenic 46139 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding 160.923 chr1 104248574 104248906 + 1.15385 NA Intergenic Intergenic 175717 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo 199.231-5 chr5 13911209 13911536 + 1.15385 NA intron (NM_001369, intron 12 of 78) intron (NM_001369, intron 12 of 78) 33108 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 181.308-6 chr9 31582060 31582312 + 1.15385 NA Intergenic Intergenic -200696 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 162.231-8 chr7 11297774 11297968 + 1.15385 NA Intergenic MLT1E2|LTR|ERVL-MaLR 323999 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding 195.462-4 chr7 30044748 30044982 + 1.15385 NA promoter-TSS (NM_001363474) promoter-TSS (NM_001363474) -220 NM_001363474 84725 Hs.233495 NM_032639 ENSG00000106086 PLEKHA8 FAPP2 pleckstrin homology domain containing A8 protein-coding 179.231-2 chr10 120550255 120550463 + 1.15385 NA intron (NM_001030059, intron 5 of 6) L1ME2|LINE|L1 -47590 NR_103717 404216 Hs.196578 NM_001012711 ENSG00000177234 LINC01561 C10orf85 long intergenic non-protein coding RNA 1561 ncRNA 161.692-9 chr6 150524990 150525133 + 1.15385 NA Intergenic Intergenic -74824 NM_001329799 57480 Hs.189781 NM_001029884 ENSG00000120278 PLEKHG1 ARHGEF41 pleckstrin homology and RhoGEF domain containing G1 protein-coding 153.616 chr8 123223065 123223296 + 1.15385 NA intron (NM_032847, intron 5 of 5) L1ME4a|LINE|L1 -7317 NR_039808 100616260 NR_039808 ENSG00000266324 MIR4663 - microRNA 4663 ncRNA 191.924 chr8 131628786 131628963 + 1.15385 NA Intergenic L1MA9|LINE|L1 -275219 NM_015137 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 162.308-4 chr3 111992183 111992444 + 1.15385 NA non-coding (NR_073570, exon 4 of 4) non-coding (NR_073570, exon 4 of 4) -6426 NM_013259 29114 Hs.169330 NM_013259 ENSG00000144834 TAGLN3 NP22|NP24|NP25 transgelin 3 protein-coding 188.231-2 chr12 23395099 23395487 + 1.15385 NA Intergenic Intergenic 189293 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 193.231 chr1 107313392 107313789 + 1.15385 NA intron (NM_001113226, intron 1 of 6) L2|LINE|L2 165521 NM_001113226 22854 Hs.133046 NM_014917 ENSG00000162631 NTNG1 Lmnt1 netrin G1 protein-coding 207.154 chr11 96899496 96899841 + 1.15385 NA Intergenic L1MC3|LINE|L1 391243 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 230 chr12 42879497 42879822 + 1.15385 NA Intergenic L1PA3|LINE|L1 187443 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA 213.923-3 chr8 118770510 118770741 + 1.15385 NA Intergenic L4_C_Mam|LINE|RTE-X -148662 NM_001101676 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding 153.385-5 chr5 51547710 51547939 + 1.15385 NA Intergenic MLT1C|LTR|ERVL-MaLR 164376 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding 185.616 chr2 146691612 146691909 + 1.15385 NA Intergenic MER34B-int|LTR|ERV1 104703 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 340.154 chr6 73408873 73409437 + 1.15385 NA intron (NM_018665, intron 9 of 16) intron (NM_018665, intron 9 of 16) 14327 NM_018665 55510 Hs.125507 NM_018665 ENSG00000080007 DDX43 CT13|HAGE DEAD-box helicase 43 protein-coding 199.231-4 chr4 105215788 105215964 + 1.15385 NA intron (NM_001127208, intron 2 of 10) intron (NM_001127208, intron 2 of 10) 69191 NM_001127208 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 253.154 chr1 225508227 225508650 + 1.15385 NA intron (NM_001008493, intron 10 of 14) intron (NM_001008493, intron 10 of 14) -79583 NM_194442 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding 295.847 chr3 58216820 58217317 + 1.15385 NA Intergenic MER96B|DNA|hAT-Tip100 -6065 NM_001256560 1776 Hs.476453 NM_004944 ENSG00000163687 DNASE1L3 DHP2|DNAS1L3|LSD|SLEB16 deoxyribonuclease 1 like 3 protein-coding 189.231-4 chr5 181253235 181253425 + 1.15385 NA intron (NR_109909, intron 2 of 2) AluSp|SINE|Alu 6789 NR_109909 101928649 Hs.723307 NR_109909 CTC-338M12.4 - uncharacterized LOC101928649 ncRNA 156.77 chr3 45280049 45280249 + 1.15385 NA Intergenic L1MA4|LINE|L1 -53862 NM_015444 25907 Hs.740403 NM_015444 ENSG00000249992 TMEM158 BBP|RIS1|p40BBP transmembrane protein 158 (gene/pseudogene) protein-coding 170.769-10 chr21 23616554 23616771 + 1.15385 NA Intergenic Intergenic -231827 NR_040254 266917 Hs.145622 NR_040254 ENSG00000228592 D21S2088E - D21S2088E ncRNA 179.231-3 chr14 70377428 70377718 + 1.15385 NA intron (NM_001202549, intron 2 of 4) intron (NM_001202549, intron 2 of 4) -17890 NM_016468 51241 Hs.709581 NM_016468 ENSG00000133983 COX16 C14orf112|HSPC203|hCOX16 cytochrome c oxidase assembly factor COX16 protein-coding 193.847 chr8 134221550 134221750 + 1.15385 NA Intergenic L1PB3|LINE|L1 335154 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 220.154-4 chr2 26784961 26785246 + 1.15385 NA promoter-TSS (NM_001809) promoter-TSS (NM_001809) -912 NM_001042426 1058 Hs.1594 NM_001809 ENSG00000115163 CENPA CENP-A|CenH3 centromere protein A protein-coding 221.539-2 chr20 45834034 45834305 + 1.15385 NA intron (NM_001042633, intron 1 of 4) CpG 370 NM_001042633 90203 Hs.472854 NM_033421 ENSG00000124104 SNX21 C20orf161|PP3993|SNX-L|dJ337O18.4 sorting nexin family member 21 protein-coding 249.001 chr10 74293596 74293863 + 1.15385 NA intron (NM_001369124, intron 3 of 9) intron (NM_001369124, intron 3 of 9) 116966 NM_001369124 132 Hs.656586 NM_001123 ENSG00000156110 ADK AK adenosine kinase protein-coding 177.616-2 chr8 139933766 139934070 + 1.15385 NA intron (NM_001160372, intron 19 of 22) MIRb|SINE|MIR 166617 NR_144431 359809 Hs.26814 NR_144431 ENSG00000282164 PEG13 - paternally expressed 13 ncRNA 180.385-6 chr8 72968217 72968401 + 1.15385 NA Intergenic Intergenic -40555 NM_003218 7013 Hs.442707 NM_003218 ENSG00000147601 TERF1 PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1 telomeric repeat binding factor 1 protein-coding 160.923-4 chr5 123297709 123297905 + 1.15385 NA Intergenic Intergenic 125785 NM_153223 153241 Hs.483209 NM_153223 ENSG00000168944 CEP120 CCDC100|JBTS31|SRTD13 centrosomal protein 120 protein-coding 161.154 chr22 34934404 34934640 + 1.15385 NA intron (NR_138042, intron 1 of 4) intron (NR_138042, intron 1 of 4) 63394 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 199.231-7 chr8 82320070 82320299 + 1.15385 NA Intergenic Intergenic -477898 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 200.385 chr10 104420783 104421103 + 1.15385 NA intron (NM_001008723, intron 15 of 17) AluJo|SINE|Alu 59332 NR_120624 101927523 Hs.407539 NR_120624 ENSG00000225768 LINC02620 - long intergenic non-protein coding RNA 2620 ncRNA 191.923-3 chr8 86997851 86998125 + 1.15385 NA intron (NM_173538, intron 4 of 10) intron (NM_173538, intron 4 of 10) 131573 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 266.923 chr10 31198423 31198821 + 1.15385 NA intron (NR_134478, intron 1 of 2) intron (NR_134478, intron 1 of 2) 10739 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA 166.847 chr17 73321644 73321832 + 1.15385 NA Intergenic Charlie15a|DNA|hAT-Charlie -9737 NM_012121 23580 Hs.3903 NM_012121 ENSG00000179604 CDC42EP4 BORG4|CEP4|KAIA1777 CDC42 effector protein 4 protein-coding 199.154 chr10 117280011 117280288 + 1.15385 NA TTS (NM_003054) TTS (NM_003054) 39035 NM_003054 6571 Hs.596992 NM_003054 ENSG00000165646 SLC18A2 PKDYS2|SVAT|SVMT|VAT2|VMAT2 solute carrier family 18 member A2 protein-coding 170.154-4 chr5 81878157 81878606 + 1.15385 NA Intergenic L2c|LINE|L2 -93642 NM_001131028 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding 179.77 chr6 138159522 138159771 + 1.15385 NA Intergenic L1ME4a|LINE|L1 -2293 NM_020340 57221 Hs.194408 NM_020340 ENSG00000112379 ARFGEF3 A7322|BIG3|C6orf92|KIAA1244|PPP1R33|dJ171N11.1 ARFGEF family member 3 protein-coding 262.154 chr8 59981318 59981709 + 1.15385 NA Intergenic Tigger1|DNA|TcMar-Tigger 299887 NR_135821 767 Hs.654388 NM_004056 ENSG00000178538 CA8 CA-RP|CA-VIII|CALS|CAMRQ3|CARP carbonic anhydrase 8 protein-coding 157.231-2 chr14 35672571 35672768 + 1.15385 NA intron (NM_014990, intron 24 of 40) intron (NM_014990, intron 24 of 40) 90262 NR_135620 107399303 Hs.742611 NR_135620 SNORA101B ZL4 small nucleolar RNA, H/ACA box 101B snoRNA 180.77 chr18 34355356 34355559 + 1.15385 NA Intergenic Intergenic -131906 NM_001353233 8715 Hs.514795 NM_003787 ENSG00000101746 NOL4 CT125|HRIHFB2255|NOLP nucleolar protein 4 protein-coding 197.539 chr17 62386882 62387097 + 1.15385 NA intron (NM_001144933, intron 4 of 11) AluJo|SINE|Alu 6436 NM_173503 146779 Hs.152670 NM_173503 ENSG00000172421 EFCAB3 - EF-hand calcium binding domain 3 protein-coding 204.462 chr2 32969328 32969607 + 1.15385 NA intron (NM_206943, intron 2 of 33) L1PA15|LINE|L1 22514 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding 302.308 chr1 52494892 52495301 + 1.15385 NA intron (NM_001009881, intron 6 of 29) MIRb|SINE|MIR 57994 NM_015269 23318 Hs.655407 NM_015269 ENSG00000134744 TUT4 PAPD3|TENT3A|ZCCHC11 terminal uridylyl transferase 4 protein-coding 154.616 chr13 78183972 78184121 + 1.15385 NA intron (NR_047001, intron 1 of 5) intron (NR_047001, intron 1 of 5) 129191 NR_047001 100874222 Hs.493062 NR_047001 ENSG00000234377 OBI1-AS1 POU4F1-AS1|RNF219-AS1 OBI1 antisense RNA 1 ncRNA 178.154-7 chr8 124964158 124964345 + 1.15385 NA Intergenic MER21C|LTR|ERVL -9044 NM_152412 137209 Hs.175350 NM_152412 ENSG00000180938 ZNF572 - zinc finger protein 572 protein-coding 229.616 chr2 53134197 53134665 + 1.15385 NA Intergenic Intergenic -431816 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 222.769-3 chr5 92535602 92535956 + 1.15385 NA Intergenic L1ME3Cz|LINE|L1 1035564 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 234.924 chr4 92583552 92583785 + 1.15385 NA intron (NM_001286838, intron 1 of 14) (AT)n|Simple_repeat|Simple_repeat 279269 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding 265.846 chr14 43158102 43158610 + 1.15385 NA Intergenic L2a|LINE|L2 1348927 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 163.154 chr15 63418993 63419191 + 1.15385 NA intron (NR_120375, intron 4 of 6) MER5A|DNA|hAT-Charlie 28862 NR_120375 102723344 Hs.569500 NR_120375 LINC02568 - long intergenic non-protein coding RNA 2568 ncRNA 200.385-4 chr7 16119783 16119993 + 1.15385 NA intron (NM_001101426, intron 9 of 9) L2a|LINE|L2 -90598 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA 229.539 chr10 90881788 90882049 + 1.15385 NA intron (NM_006413, intron 5 of 10) intron (NM_006413, intron 5 of 10) 9944 NM_001104546 10556 Hs.139120 NM_006413 ENSG00000148688 RPP30 TSG15 ribonuclease P/MRP subunit p30 protein-coding 167.308-4 chr18 1062621 1062817 + 1.15385 NA Intergenic L1MA9|LINE|L1 -134726 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 196.385-5 chr9 98153837 98154089 + 1.15385 NA intron (NM_003389, intron 2 of 11) L1MEd|LINE|L1 18929 NM_003389 7464 Hs.113094 NM_003389 ENSG00000106789 CORO2A CLIPINB|IR10|WDR2 coronin 2A protein-coding 188.847 chr1 60713343 60713551 + 1.15385 NA intron (NR_110628, intron 4 of 5) L1MA3|LINE|L1 -90762 NR_146508 105378763 Hs.551175 NR_146508 ENSG00000226476 LINC01748 - long intergenic non-protein coding RNA 1748 ncRNA 250 chr14 39915303 39915718 + 1.15385 NA Intergenic Intergenic -483010 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 220.154-3 chr14 48333570 48333949 + 1.15385 NA Intergenic Intergenic -538745 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 232.769 chr4 78543986 78544335 + 1.15385 NA 3' UTR (NM_025074, exon 74 of 74) 3' UTR (NM_025074, exon 74 of 74) -7610 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding 297.616 chr16 12956418 12957016 + 1.15385 NA intron (NM_001145204, intron 2 of 4) L1PB4|LINE|L1 55119 NM_001145205 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding 196.616 chr1 67986044 67986308 + 1.15385 NA intron (NR_040077, intron 1 of 9) intron (NR_040077, intron 1 of 9) 65455 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding 220.616 chr5 23298136 23298391 + 1.15385 NA Intergenic Intergenic -209346 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding 210.77 chr5 40547605 40547826 + 1.15385 NA Intergenic MIR|SINE|MIR -132200 NM_000958 5734 Hs.199248 NM_000958 ENSG00000171522 PTGER4 EP4|EP4R prostaglandin E receptor 4 protein-coding 194.077-2 chr5 131540150 131540629 + 1.15385 NA intron (NM_016340, intron 6 of 27) AluJr4|SINE|Alu 94840 NM_001164386 51735 Hs.483329 NM_016340 ENSG00000158987 RAPGEF6 KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Rap guanine nucleotide exchange factor 6 protein-coding 159.308-5 chr4 74554863 74555056 + 1.15385 NA Intergenic Intergenic 109823 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding 175.847 chr1 175519037 175519228 + 1.15385 NA intron (NM_003285, intron 2 of 22) intron (NM_003285, intron 2 of 22) 224463 NM_001328635 7143 Hs.659864 NM_003285 ENSG00000116147 TNR TN-R tenascin R protein-coding 196.923 chr2 123251945 123252204 + 1.15385 NA Intergenic L1MC3|LINE|L1 -178593 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 189.923-3 chr17 29490841 29491119 + 1.15385 NA intron (NM_025142, intron 9 of 17) MLT1A1|LTR|ERVL-MaLR 76057 NM_198147 116236 Hs.106510 NM_198147 ENSG00000168792 ABHD15 - abhydrolase domain containing 15 protein-coding 214.847 chr1 65434174 65434438 + 1.15385 NA 3' UTR (NM_001198681, exon 5 of 5) 3' UTR (NM_001198681, exon 5 of 5) 13590 NM_001198681 54741 Hs.23581 NM_017526 ENSG00000213625 LEPROT LEPR|OB-RGRP|OBRGRP|VPS55 leptin receptor overlapping transcript protein-coding 186.308-4 chr7 31522537 31522746 + 1.15385 NA intron (NR_047565, intron 1 of 13) intron (NR_047565, intron 1 of 13) 5277 NR_047565 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding 215.308 chr22 32003143 32003436 + 1.15385 NA intron (NR_149128, intron 4 of 4) L1MA4|LINE|L1 32466 NR_149128 105372999 Hs.512525 NR_149128 LINC02558 - long intergenic non-protein coding RNA 2558 ncRNA 159.462-2 chr20 21250010 21250319 + 1.15385 NA Intergenic Intergenic -31875 NR_109956 101929591 Hs.656066 NR_109956 ENSG00000232712 KIZ-AS1 - KIZ antisense RNA 1 ncRNA 176.539 chr3 41591702 41591958 + 1.15385 NA intron (NR_136342, intron 29 of 34) Tigger6b|DNA|TcMar-Tigger 370273 NM_001322500 54986 Hs.656192 NM_017886 ENSG00000168038 ULK4 FAM7C1|REC01035 unc-51 like kinase 4 protein-coding 216.077 chr4 33739090 33739522 + 1.15385 NA Intergenic Intergenic 300587 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 161.923-5 chr3 111620680 111620878 + 1.15385 NA intron (NR_134917, intron 8 of 14) intron (NR_134917, intron 8 of 14) -25433 NM_024508 79413 Hs.136912 NM_024508 ENSG00000177494 ZBED2 - zinc finger BED-type containing 2 protein-coding 239.616 chr1 37187580 37187895 + 1.15385 NA Intergenic Intergenic 26174 NR_036217 100422898 NR_036217 ENSG00000264698 MIR4255 - microRNA 4255 ncRNA 199.616 chr2 225003615 225003885 + 1.15385 NA intron (NM_014689, intron 1 of 55) intron (NM_014689, intron 1 of 55) 6790 NR_039641 100616207 NR_039641 ENSG00000263828 MIR4439 - microRNA 4439 ncRNA 155.308-7 chr7 46324146 46324479 + 1.15385 NA Intergenic Intergenic 372810 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 167.77 chr8 77050529 77050703 + 1.15385 NA Intergenic MLT1J2|LTR|ERVL-MaLR -49572 NM_001172086 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 228.462-2 chr8 104483834 104484164 + 1.15385 NA TTS (NR_030330) TTS (NR_030330) 466 NR_030330 693127 NR_030330 ENSG00000208032 MIR548A3 MIRN548A3 microRNA 548a-3 ncRNA 183.923-4 chr20 805152 805447 + 1.15385 NA Intergenic MER4-int|LTR|ERV1 -28416 NM_001289146 83541 Hs.574822 NM_031424 ENSG00000125898 FAM110A C20orf55|F10|bA371L19.3 family with sequence similarity 110 member A protein-coding 204.231 chr14 66548656 66548953 + 1.15385 NA intron (NM_001024218, intron 1 of 21) Tigger1|DNA|TcMar-Tigger 41397 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 151.616 chr9 25324400 25324541 + 1.15385 NA Intergenic L1MB8|LINE|L1 354388 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 161.077-5 chr2 12189487 12189650 + 1.15385 NA intron (NR_110196, intron 3 of 5) intron (NR_110196, intron 3 of 5) -9562 NR_037452 100500884 NR_037452 ENSG00000264089 MIR3681 - microRNA 3681 ncRNA 163.077-6 chr5 72969337 72969563 + 1.15385 NA intron (NM_001146032, intron 2 of 24) L2|LINE|L2 13409 NM_001146032 115548 Hs.165762 NM_138782 ENSG00000157107 FCHO2 - FCH domain only 2 protein-coding 214.077 chr15 50110459 50110807 + 1.15385 NA intron (NR_073597, intron 1 of 26) intron (NR_073597, intron 1 of 26) 2746 NR_073598 79895 Hs.511311 NM_024837 ENSG00000104043 ATP8B4 ATPIM ATPase phospholipid transporting 8B4 (putative) protein-coding 203.385 chr11 92787318 92787625 + 1.15385 NA intron (NM_001008781, intron 6 of 24) L1MC5|LINE|L1 128157 NR_135091 105369431 Hs.532389 NR_135091 LINC02746 - long intergenic non-protein coding RNA 2746 ncRNA 253.154-3 chr3 167160427 167160958 + 1.15385 NA Intergenic Intergenic 219591 NM_001199202 79740 Hs.478143 NM_024687 ENSG00000169064 ZBBX - zinc finger B-box domain containing protein-coding 162.692-10 chrX 44373817 44374066 + 1.15385 NA Intergenic MIR|SINE|MIR -30269 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding 253.154-2 chr2 101511221 101511725 + 1.15385 NA Intergenic Intergenic -36361 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding 205.385-3 chr3 22209161 22209469 + 1.15385 NA Intergenic Intergenic 252176 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA 173.308-2 chr10 96164440 96164676 + 1.15385 NA TTS (NM_001330737) TTS (NM_001330737) 33936 NM_001330734 9849 Hs.600823 NM_014803 ENSG00000177853 ZNF518A ZNF518 zinc finger protein 518A protein-coding 152.385-3 chr2 227027946 227028155 + 1.15385 NA intron (NM_000092, intron 41 of 47) intron (NM_000092, intron 41 of 47) 136509 NM_000092 1286 Hs.591645 NM_000092 ENSG00000081052 COL4A4 ATS2|BFH|CA44 collagen type IV alpha 4 chain protein-coding 543.539 chr19 27859433 27860453 + 1.15385 NA intron (NR_146734, intron 1 of 7) HSAT4|Satellite|centr -66003 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA 309.231-2 chr6 140510244 140510581 + 1.15385 NA Intergenic L1MD2|LINE|L1 -173402 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA 154.154-5 chr14 91184835 91185151 + 1.15385 NA intron (NM_001102368, intron 8 of 13) AluSz6|SINE|Alu 58567 NR_003709 100124539 Hs.693444 NR_003709 ENSG00000221102 SNORA11B - small nucleolar RNA, H/ACA box 11B snoRNA 174.462 chr2 57932875 57933118 + 1.15385 NA intron (NM_001288838, intron 1 of 15) L1MA9|LINE|L1 25345 NM_001288837 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 240.001 chr14 47819963 47820178 + 1.15385 NA Intergenic L1MA3|LINE|L1 -25056 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 241.924 chr4 116754648 116754881 + 1.15385 NA Intergenic Intergenic 330812 NM_152402 133022 Hs.570737 NM_152402 ENSG00000174599 TRAM1L1 - translocation associated membrane protein 1 like 1 protein-coding 168.308-3 chr3 5551659 5551833 + 1.15385 NA Intergenic Intergenic -301491 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 165.692 chr11 104714586 104714821 + 1.15385 NA Intergenic L1PA16|LINE|L1 -105401 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA 165.462-2 chr5 44221510 44221709 + 1.15385 NA Intergenic Intergenic -167123 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 161.539-4 chr20 57232581 57232779 + 1.15385 NA intron (NM_001719, intron 1 of 6) intron (NM_001719, intron 1 of 6) 18984 NR_110631 102723590 Hs.667674 NR_110631 BMP7-AS1 - BMP7 antisense RNA 1 ncRNA 169.154-6 chr12 58572208 58572398 + 1.15385 NA intron (NR_120452, intron 3 of 7) MLT1H|LTR|ERVL-MaLR -19399 NR_126341 100506869 Hs.290456 NR_126341 ENSG00000258231 LOC100506869 - uncharacterized LOC100506869 ncRNA 181.923-2 chr11 109651382 109651547 + 1.15385 NA Intergenic Intergenic 229274 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding 242.769-3 chr3 31726482 31726886 + 1.15385 NA intron (NM_001174060, intron 5 of 10) intron (NM_001174060, intron 5 of 10) 22471 NR_049771 100874206 Hs.662428 NR_049771 ENSG00000232490 OSBPL10-AS1 - OSBPL10 antisense RNA 1 ncRNA 190-4 chr14 56986253 56986479 + 1.15385 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 173208 NR_029385 100309464 Hs.637962 NR_029385 ENSG00000248550 OTX2-AS1 OTX2OS1 OTX2 antisense RNA 1 (head to head) ncRNA 207.539 chr3 188363237 188363506 + 1.15385 NA intron (NM_001167671, intron 2 of 10) intron (NM_001167671, intron 2 of 10) 137966 NM_001167671 4026 Hs.720220 NM_005578 ENSG00000145012 LPP - LIM domain containing preferred translocation partner in lipoma protein-coding 212.462-2 chr2 58033704 58034085 + 1.15385 NA intron (NM_001288838, intron 3 of 15) intron (NM_001288838, intron 3 of 15) -12748 NM_001288839 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 215.846-3 chr5 36944649 36945305 + 1.15385 NA intron (NM_015384, intron 1 of 45) intron (NM_015384, intron 1 of 45) 68208 NM_015384 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding 190.385-4 chr5 105485120 105485336 + 1.15385 NA Intergenic Intergenic 385754 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 207.231-5 chr2 151270544 151270737 + 1.15385 NA 3' UTR (NM_004688, exon 8 of 8) 3' UTR (NM_004688, exon 8 of 8) -8777 NM_198557 375287 Hs.302442 NM_198557 ENSG00000184898 RBM43 C2orf38 RNA binding motif protein 43 protein-coding 222.692-2 chr6 43570820 43571185 + 1.15385 NA intron (NR_144392, intron 3 of 32) intron (NR_144392, intron 3 of 32) 5036 NM_020750 57510 Hs.203206 NM_020750 ENSG00000124571 XPO5 exp5 exportin 5 protein-coding 170.308-2 chr1 214886644 214886850 + 1.15385 NA Intergenic L2c|LINE|L2 -118795 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding 155.077 chr1 99478955 99479106 + 1.15385 NA intron (NR_125951, intron 2 of 2) L1PA16|LINE|L1 8774 NR_125951 101928270 Hs.576048 NR_125951 ENSG00000224445 LINC01708 - long intergenic non-protein coding RNA 1708 ncRNA 211.077 chr1 45447546 45447839 + 1.15385 NA intron (NM_001320800, intron 1 of 9) Tigger3b|DNA|TcMar-Tigger 43471 NM_001320800 10420 Hs.591499 NM_007170 ENSG00000070759 TESK2 - testis associated actin remodelling kinase 2 protein-coding 215.77 chr7 16207871 16208143 + 1.15385 NA intron (NM_001101426, intron 9 of 9) intron (NM_001101426, intron 9 of 9) -2479 NR_038946 100506025 Hs.649029 NR_038946 ENSG00000229688 CRPPA-AS1 ISPD-AS1 CRPPA antisense RNA 1 ncRNA 225.692-4 chr11 76548393 76548776 + 1.15385 NA intron (NM_001300942, intron 21 of 21) MIR3|SINE|MIR 103559 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding 221.077-3 chr6 34654676 34654915 + 1.15385 NA intron (NM_022758, intron 1 of 3) intron (NM_022758, intron 1 of 3) -41359 NR_134625 101929243 Hs.643498 NR_134625 ENSG00000272288 LOC101929243 - uncharacterized LOC101929243 ncRNA 157.385-5 chr6 140061687 140061915 + 1.15385 NA intron (NR_121623, intron 1 of 1) intron (NR_121623, intron 1 of 1) -70540 NR_121624 103352541 Hs.582647 NR_121624 LOC103352541 - uncharacterized LOC103352541 ncRNA 196-5 chr12 60629841 60630066 + 1.15385 NA Intergenic Intergenic 940583 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 208.308-4 chr6 28097204 28097511 + 1.15385 NA Intergenic Intergenic 6550 NR_024063 221584 Hs.634723 NR_024063 ZSCAN12P1 ZNF187p1|ZNF305P1|ZNF96L1|ZNF96P1|ZSCAN12L1|dJ313I6.7 zinc finger and SCAN domain containing 12 pseudogene 1 pseudo 172.616 chr15 73612743 73612951 + 1.15385 NA intron (NM_012428, intron 1 of 8) intron (NM_012428, intron 1 of 8) 20542 NM_001161364 27020 Hs.744867 NM_012428 ENSG00000156642 NPTN GP55|GP65|SDFR1|SDR1|np55|np65 neuroplastin protein-coding 174.615-2 chr11 43498605 43498871 + 1.15385 NA Intergenic Intergenic -60918 NR_031577 100313777 NR_031577 ENSG00000211568 MIR670 hsa-mir-670 microRNA 670 ncRNA 157.231-4 chr18 38804021 38804266 + 1.15385 NA Intergenic L1MEd|LINE|L1 818032 NR_030628 100126323 NR_030628 ENSG00000283615 MIR924 MIRN924|hsa-mir-924 microRNA 924 ncRNA 166.462-6 chr8 68072061 68072432 + 1.15385 NA intron (NM_024870, intron 13 of 39) intron (NM_024870, intron 13 of 39) 120200 NM_025170 80243 Hs.169943 NM_024870 ENSG00000046889 PREX2 DEP.2|DEPDC2|P-REX2|PPP1R129 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 protein-coding 237 chr4 73449514 73449956 + 1.15385 NA intron (NM_001354717, intron 9 of 14) intron (NM_001354717, intron 9 of 14) 13514 NM_001354717 174 Hs.518808 NM_001134 ENSG00000081051 AFP AFPD|FETA|HPAFP alpha fetoprotein protein-coding 248.77 chr4 83820145 83820431 + 1.15385 NA Intergenic Intergenic 284180 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding 214-2 chr5 34554350 34554582 + 1.15385 NA Intergenic Intergenic -101862 NM_001145522 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding 168.077-3 chr17 66805257 66805457 + 1.15385 NA 3' UTR (NM_002737, exon 17 of 17) 3' UTR (NM_002737, exon 17 of 17) 18285 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA 161.077-7 chr4 69797550 69797718 + 1.15385 NA Intergenic Intergenic -37014 NM_014465 27284 Hs.129742 NM_014465 ENSG00000173597 SULT1B1 ST1B1|ST1B2|SULT1B2 sulfotransferase family 1B member 1 protein-coding 202.616 chr1 240465802 240466080 + 1.15385 NA intron (NM_020066, intron 16 of 17) intron (NM_020066, intron 16 of 17) 146214 NM_022469 64388 Hs.98206 NM_022469 ENSG00000180875 GREM2 CKTSF1B2|DAND3|PRDC|STHAG9 gremlin 2, DAN family BMP antagonist protein-coding 293.847 chr1 147689870 147690272 + 1.15385 NA Intergenic Intergenic -19547 NM_016361 51205 Hs.562154 NM_016361 ENSG00000162836 ACP6 ACPL1|LPAP|PACPL1 acid phosphatase 6, lysophosphatidic protein-coding 175.077-6 chr5 110920532 110920764 + 1.15385 NA Intergenic Intergenic -149432 NR_045089 85480 Hs.389874 NM_033035 ENSG00000145777 TSLP - thymic stromal lymphopoietin protein-coding 243.001 chr1 68701665 68701964 + 1.15385 NA Intergenic L2b|LINE|L2 -204732 NM_001114120 55635 Hs.445098 NM_017779 ENSG00000024526 DEPDC1 DEP.8|DEPDC1-V2|DEPDC1A|SDP35 DEP domain containing 1 protein-coding 294.693 chr10 55242075 55242474 + 1.15385 NA intron (NM_001354404, intron 2 of 34) intron (NM_001354404, intron 2 of 34) -356768 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding 255.616 chr11 47941826 47942233 + 1.15385 NA Intergenic MIR1_Amn|SINE|MIR -38530 NM_002843 5795 Hs.318547 NM_002843 ENSG00000149177 PTPRJ CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1 protein tyrosine phosphatase receptor type J protein-coding 164.616-2 chr8 124495497 124495665 + 1.15385 NA intron (NM_001146160, intron 7 of 9) intron (NM_001146160, intron 7 of 9) 12995 NR_106903 102466200 NR_106903 ENSG00000284087 MIR6844 hsa-mir-6844 microRNA 6844 ncRNA 165.769-6 chr14 60989702 60989912 + 1.15385 NA intron (NR_033344, intron 3 of 16) L2a|LINE|L2 -8117 NM_001350253 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding 174.923-12 chr7 43957294 43957551 + 1.15385 NA intron (NR_003655, intron 13 of 15) L1M2|LINE|L1 30986 NM_015983 51619 Hs.19196 NM_015983 ENSG00000078967 UBE2D4 HBUCE1 ubiquitin conjugating enzyme E2 D4 (putative) protein-coding 179-6 chr8 122590835 122591213 + 1.15385 NA Intergenic Intergenic -22380 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 269.462-2 chr8 105243028 105243429 + 1.15385 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -75210 NM_001362836 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 231.231 chr14 42081343 42081846 + 1.15385 NA Intergenic Intergenic 474738 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 262.385 chr6 65016302 65016737 + 1.15385 NA intron (NM_001292009, intron 13 of 43) intron (NM_001292009, intron 13 of 43) -284899 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 186.923-11 chr5 90951802 90952091 + 1.15385 NA intron (NR_003149, intron 83 of 89) intron (NR_003149, intron 83 of 89) 362456 NR_103549 100505994 Hs.628363 NR_103548 ENSG00000248323 LUCAT1 SCAL1|SCAT5 lung cancer associated transcript 1 ncRNA 163.154-2 chr19 43317539 43317735 + 1.15385 NA Intergenic L1M3|LINE|L1 -31419 NR_026881 23574 Hs.721578 NR_026881 PRG1 - p53-responsive gene 1 ncRNA 319.847 chr11 40009083 40009406 + 1.15385 NA Intergenic L2a|LINE|L2 283886 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 234.308-2 chr22 28076441 28076789 + 1.15385 NA intron (NM_001145418, intron 12 of 22) AluJo|SINE|Alu -156003 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 171.231-5 chr6 45766938 45767351 + 1.15385 NA Intergenic L1MEf|LINE|L1 170453 NR_045672 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding 225.308-2 chr17 78049149 78049368 + 1.15385 NA exon (NM_001142640, exon 4 of 22) exon (NM_001142640, exon 4 of 22) 45021 NM_001142640 57690 Hs.406810 NM_018996 ENSG00000078687 TNRC6C - trinucleotide repeat containing adaptor 6C protein-coding 179.231-7 chr9 90252478 90252812 + 1.15385 NA Intergenic L1M5|LINE|L1 180844 NR_109795 101927873 Hs.598482 NR_109795 ENSG00000231107 LINC01508 - long intergenic non-protein coding RNA 1508 ncRNA 307.385 chr11 20199721 20200152 + 1.15385 NA Intergenic Intergenic -39461 NM_001029865 120237 NM_001029865 ENSG00000109851 DBX1 - developing brain homeobox 1 protein-coding 170.077-4 chr2 64710249 64710541 + 1.15385 NA Intergenic Intergenic -56482 NM_014755 9792 Hs.591569 NM_014755 ENSG00000179833 SERTAD2 Sei-2|TRIP-Br2|TRIPBR2 SERTA domain containing 2 protein-coding 193.385-4 chr5 57983951 57984138 + 1.15385 NA Intergenic Intergenic -84882 NR_109900 101928539 Hs.639385 NR_109900 ENSG00000249584 LINC02225 - long intergenic non-protein coding RNA 2225 ncRNA 223.154 chr5 54348795 54349097 + 1.15385 NA intron (NR_126379, intron 1 of 4) MER57-int|LTR|ERV1 28002 NR_126379 104355136 Hs.559024 NR_126379 ENSG00000249069 LINC01033 - long intergenic non-protein coding RNA 1033 ncRNA 237.539 chr2 221688552 221689245 + 1.15385 NA Intergenic Intergenic -114696 NM_001304536 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding 266.154 chr1 239632554 239632905 + 1.15385 NA intron (NM_001347716, intron 4 of 7) intron (NM_001347716, intron 4 of 7) 3656 NM_000740 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding 214.385 chr2 26607665 26608030 + 1.15385 NA intron (NM_001029881, intron 3 of 6) intron (NM_001029881, intron 3 of 6) 33519 NM_001029881 130106 Hs.591579 NM_001029881 ENSG00000157884 CIB4 KIP4 calcium and integrin binding family member 4 protein-coding 371.155 chr16 64382543 64383045 + 1.15385 NA Intergenic Intergenic 739269 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding 155-4 chr16 8367646 8367873 + 1.15385 NA Intergenic Intergenic 222079 NM_001146336 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 185.77 chr20 14397340 14397536 + 1.15385 NA intron (NM_001351663, intron 3 of 17) L1MEc|LINE|L1 -59771 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding 275.077 chr4 104463739 104464085 + 1.15385 NA Intergenic Intergenic -27053 NR_125926 101929468 Hs.480435 NR_125926 ENSG00000245384 CXXC4-AS1 - CXXC4 antisense RNA 1 ncRNA 167.846-3 chr12 39684991 39685238 + 1.15385 NA intron (NM_001031748, intron 10 of 12) intron (NM_001031748, intron 10 of 12) 58931 NM_001031748 283461 Hs.648205 NM_001031748 ENSG00000180116 C12orf40 HEL-206|HEL-S-94 chromosome 12 open reading frame 40 protein-coding 202.616-2 chr10 24130579 24130764 + 1.15385 NA intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -78120 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 156.539 chr5 126638803 126639027 + 1.15385 NA Intergenic Intergenic 7210 NM_207408 389320 Hs.177983 NM_207408 ENSG00000196900 TEX43 C5orf48|Tseg7 testis expressed 43 protein-coding 213.77 chr12 18885091 18885334 + 1.15385 NA Intergenic MSTC|LTR|ERVL-MaLR 147093 NM_033328 93661 Hs.131288 NM_033328 ENSG00000177938 CAPZA3 CAPPA3|Gsg3|HEL-S-86 capping actin protein of muscle Z-line subunit alpha 3 protein-coding 232 chr9 4324300 4324724 + 1.15385 NA Intergenic Intergenic -24444 NM_001042413 169792 Hs.162125 NM_152629 ENSG00000107249 GLIS3 NDH|ZNF515 GLIS family zinc finger 3 protein-coding 218.154-2 chr20 39766946 39767245 + 1.15385 NA Intergenic L1MCb|LINE|L1 -237366 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 174.692 chr2 39483087 39483308 + 1.15385 NA intron (NR_037875, intron 3 of 5) intron (NR_037875, intron 3 of 5) 45781 NR_037875 728730 Hs.655344 NR_037875 ENSG00000231312 MAP4K3-DT - MAP4K3 divergent transcript ncRNA 216.231 chr2 31863596 31863991 + 1.15385 NA Intergenic Intergenic -59813 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 173.308 chr10 82049251 82049452 + 1.15385 NA intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 171664 NR_163252 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 222.001 chr4 42351473 42351749 + 1.15385 NA intron (NR_134668, intron 1 of 1) intron (NR_134668, intron 1 of 1) 39657 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA 219.924 chr2 141619717 141619958 + 1.15385 NA intron (NM_018557, intron 2 of 90) intron (NM_018557, intron 2 of 90) 511864 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding 196.923-4 chr8 83647723 83647940 + 1.15385 NA Intergenic L1ME2|LINE|L1 244073 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 196.385 chr12 20738181 20738566 + 1.15385 NA intron (NM_017435, intron 11 of 14) intron (NM_017435, intron 11 of 14) 42908 NM_001145944 53919 Hs.47261 NM_017435 ENSG00000139155 SLCO1C1 OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14 solute carrier organic anion transporter family member 1C1 protein-coding 187.846-3 chr7 17796893 17797158 + 1.15385 NA intron (NM_001350862, intron 24 of 25) intron (NM_001350862, intron 24 of 25) 143469 NM_001350866 23161 Hs.487648 NM_015132 ENSG00000071189 SNX13 RGS-PX1 sorting nexin 13 protein-coding 225.462-2 chr16 48493143 48493503 + 1.15385 NA Intergenic Intergenic -107910 NM_003031 6477 Hs.706828 NM_003031 ENSG00000196470 SIAH1 SIAH1A siah E3 ubiquitin protein ligase 1 protein-coding 155.77 chr18 63255186 63255372 + 1.15385 NA intron (NM_000633, intron 2 of 2) MamRTE1|LINE|RTE-BovB 64101 NM_000657 596 Hs.150749 NM_000633 ENSG00000171791 BCL2 Bcl-2|PPP1R50 BCL2 apoptosis regulator protein-coding 172.154-2 chr11 10269057 10269310 + 1.15385 NA intron (NM_030962, intron 1 of 39) intron (NM_030962, intron 1 of 39) 25024 NM_030962 81846 Hs.577252 NM_030962 ENSG00000133812 SBF2 CMT4B2|DENND7B|MTMR13 SET binding factor 2 protein-coding 214.539 chr10 108930852 108931186 + 1.15385 NA Intergenic Intergenic -861726 NR_125760 103695365 Hs.648991 NR_125760 ENSG00000229981 LINC01435 TCONS_00018040 long intergenic non-protein coding RNA 1435 ncRNA 153.769-6 chrX 108621200 108621585 + 1.15385 NA intron (NM_033380, intron 31 of 50) AluJr|SINE|Alu 114985 NM_003604 8471 Hs.407141 NM_003604 ENSG00000133124 IRS4 IRS-4|PY160 insulin receptor substrate 4 protein-coding 176.077-5 chr17 60676898 60677107 + 1.15385 NA promoter-TSS (NM_001353146) promoter-TSS (NM_001353146) -849 NM_001320470 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 189.539 chr1 66716302 66716525 + 1.15385 NA intron (NM_001350218, intron 16 of 22) L3b|LINE|CR1 -36046 NM_152665 200132 Hs.479226 NM_152665 ENSG00000152760 TCTEX1D1 - Tctex1 domain containing 1 protein-coding 191.154-4 chr20 53240313 53240515 + 1.15385 NA intron (NM_001193421, intron 1 of 2) intron (NM_001193421, intron 1 of 2) 55131 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding 192.924 chr1 202905165 202905390 + 1.15385 NA intron (NM_021633, intron 6 of 11) intron (NM_021633, intron 6 of 11) -16128 NM_002871 5877 Hs.90875 NM_002871 ENSG00000183155 RABIF MSS4|RASGFR3|RASGRF3 RAB interacting factor protein-coding 254.231 chr10 52248214 52248859 + 1.15385 NA intron (NM_001098512, intron 9 of 17) intron (NM_001098512, intron 9 of 17) 65592 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA 170-2 chr14 59400447 59400835 + 1.15385 NA Intergenic AluY|SINE|Alu 64739 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding 163.846-13 chr6 24093549 24093745 + 1.15385 NA Intergenic Intergenic -32568 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding 178.077-5 chr2 44189035 44189294 + 1.15385 NA intron (NM_177969, intron 1 of 4) AluJb|SINE|Alu 20289 NM_001033557 5495 Hs.416769 NM_002706 ENSG00000138032 PPM1B PP2C-beta|PP2C-beta-X|PP2CB|PP2CBETA|PPC2BETAX protein phosphatase, Mg2+/Mn2+ dependent 1B protein-coding 229.847 chr5 33722895 33723221 + 1.15385 NA intron (NM_001324512, intron 3 of 21) intron (NM_001324512, intron 3 of 21) 168932 NM_001324511 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding 270.769 chr8 127616638 127617061 + 1.15385 NA Intergenic MIR|SINE|MIR 117118 NR_117102 100270680 Hs.333720 NR_117101 ENSG00000249375 CASC11 CARLO7|CARLo-7|LINC00990|TCONS_00014535 cancer susceptibility 11 ncRNA 299.231 chr15 62752664 62753104 + 1.15385 NA intron (NM_015059, intron 32 of 55) intron (NM_015059, intron 32 of 55) -71073 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA 200.924 chr11 89516692 89516923 + 1.15385 NA intron (NM_001143837, intron 2 of 20) L1ME1|LINE|L1 -24588 NM_001300995 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding 158.077-8 chr5 62465321 62465524 + 1.15385 NA intron (NM_016338, intron 5 of 29) intron (NM_016338, intron 5 of 29) 46538 NM_001134779 51194 Hs.482269 NM_016338 ENSG00000086200 IPO11 RanBP11 importin 11 protein-coding 173.308-3 chr6 87388689 87388923 + 1.15385 NA Intergenic Intergenic -8318 NR_026784 63914 Hs.645177 NM_022084 ENSG00000111850 LINC01590 C6orf164|dJ102H19.4 long intergenic non-protein coding RNA 1590 ncRNA 253.385-2 chr7 6322217 6322485 + 1.15385 NA Intergenic AluJb|SINE|Alu 26616 NM_001037163 84792 Hs.696146 NM_001037163 ENSG00000286075 FAM220A ACPIN1|C7orf70|SIPAR family with sequence similarity 220 member A protein-coding 288.308 chr8 139591187 139591621 + 1.15385 NA Intergenic Intergenic 111719 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 254.77 chr4 69676935 69677166 + 1.15385 NA Intergenic L1MA1|LINE|L1 -23803 NM_001252274 10941 Hs.225950 NM_006798 ENSG00000173610 UGT2A1 UDPGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus protein-coding 228.847 chr7 8059737 8059953 + 1.15385 NA intron (NM_138426, intron 4 of 7) MamRep137|DNA|TcMar-Tigger 91049 NM_138426 113263 Hs.131673 NM_138426 ENSG00000106415 GLCCI1 FAM117C|GCTR|GIG18|TSSN1 glucocorticoid induced 1 protein-coding 156.923-15 chr3 117932118 117932302 + 1.15385 NA Intergenic Intergenic -241285 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 189.77 chr3 118769463 118769772 + 1.15385 NA intron (NR_135547, intron 1 of 3) Charlie10|DNA|hAT-Charlie 41216 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA 202.616-3 chr2 225178968 225179256 + 1.15385 NA Intergenic Intergenic -136644 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding 161.923-3 chr21 28525549 28525761 + 1.15385 NA Intergenic Intergenic -13663 NR_026553 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA 174.462-2 chr5 31339776 31340068 + 1.15385 NA Intergenic Intergenic 146236 NM_004932 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 219.693 chr3 178038594 178038882 + 1.15385 NA Intergenic Intergenic 221873 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA 196-3 chr11 124047551 124047752 + 1.15385 NA Intergenic L1MA3|LINE|L1 -8650 NM_001004463 390265 Hs.553761 NM_001004463 ENSG00000182634 OR10G7 OR11-283 olfactory receptor family 10 subfamily G member 7 protein-coding 277.616 chr2 40678383 40678730 + 1.15385 NA Intergenic Intergenic -166121 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 248.539 chr6 104856332 104856576 + 1.15385 NA intron (NR_146792, intron 1 of 24) AluSq|SINE|Alu 3092 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding 299.308 chr21 19884044 19884470 + 1.15385 NA Intergenic Intergenic 15498 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA 167.231-9 chr8 79221174 79221626 + 1.15385 NA Intergenic L1MA1|LINE|L1 -110788 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 186.462-6 chr8 144010209 144010570 + 1.15385 NA Intergenic Intergenic -1891 NM_198572 375686 Hs.97726 NM_198572 ENSG00000186583 SPATC1 SPATA15 spermatogenesis and centriole associated 1 protein-coding 154.923-6 chr2 148089921 148090251 + 1.15385 NA intron (NM_018328, intron 2 of 14) L1PB1|LINE|L1 -68482 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding 180-7 chr7 6077076 6077406 + 1.15385 NA Intergenic Intergenic -18012 NM_001134335 27102 Hs.520205 NM_014413 ENSG00000086232 EIF2AK1 HCR|HRI eukaryotic translation initiation factor 2 alpha kinase 1 protein-coding 206.846 chr18 2795851 2796146 + 1.15385 NA exon (NM_015295, exon 46 of 48) exon (NM_015295, exon 46 of 48) -51008 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding 159.231-7 chr3 139625477 139625914 + 1.15385 NA intron (NM_001320510, intron 3 of 6) L1ME1|LINE|L1 52277 NM_001320510 349565 Hs.208673 NM_178177 ENSG00000163864 NMNAT3 FKSG76|PNAT-3|PNAT3 nicotinamide nucleotide adenylyltransferase 3 protein-coding 212.231-2 chr3 119848290 119848626 + 1.15385 NA intron (NM_002093, intron 10 of 11) L1MB5|LINE|L1 65748 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding 234.231-2 chr6 142428870 142429188 + 1.15385 NA intron (NM_198569, intron 22 of 24) intron (NM_198569, intron 22 of 24) 127022 NM_198569 57211 Hs.743302 NM_020455 ENSG00000112414 ADGRG6 APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR adhesion G protein-coupled receptor G6 protein-coding 200.385-2 chr2 133298630 133298846 + 1.15385 NA intron (NM_207481, intron 4 of 17) intron (NM_207481, intron 4 of 17) 32543 NR_110294 101928161 Hs.661917 NR_110294 ENSG00000226953 NCKAP5-AS2 - NCKAP5 antisense RNA 2 ncRNA 183.923-7 chr9 119033356 119033544 + 1.15385 NA Intergenic Intergenic 335985 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding 191.847 chr8 120895711 120896188 + 1.15385 NA Intergenic MLT1F-int|LTR|ERVL-MaLR -83903 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 165.769-11 chr4 150888308 150888576 + 1.15385 NA intron (NM_001367550, intron 17 of 56) L1MEf|LINE|L1 126825 NM_001199282 987 Hs.480938 NM_006726 ENSG00000198589 LRBA BGL|CDC4L|CVID8|LAB300|LBA LPS responsive beige-like anchor protein protein-coding 262.847 chr14 84061744 84062390 + 1.15385 NA Intergenic Arthur1|DNA|hAT-Tip100 -1209865 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 250.154-3 chr9 75501876 75502259 + 1.15385 NA Intergenic Intergenic -388577 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding 227.616 chr14 40918999 40919359 + 1.15385 NA Intergenic Intergenic -35532 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 229.847-2 chrX 57353135 57353369 + 1.15385 NA intron (NR_148564, intron 5 of 11) L1PB4|LINE|L1 66398 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding 224.769-2 chr2 187004296 187004569 + 1.15385 NA Intergenic L1ME3Cz|LINE|L1 -155262 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding 192.231-2 chr7 48631043 48631333 + 1.15385 NA intron (NM_152701, intron 59 of 61) L1PA15|LINE|L1 -293359 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 157.308-2 chr11 58522679 58522951 + 1.15385 NA Intergenic Intergenic -14710 NM_001005218 219968 Hs.553647 NM_001005218 ENSG00000198283 OR5B21 - olfactory receptor family 5 subfamily B member 21 protein-coding 251.001 chr11 72922447 72922682 + 1.15385 NA intron (NM_014824, intron 8 of 19) intron (NM_014824, intron 8 of 19) 108153 NM_033388 89849 Hs.653186 NM_033388 ENSG00000168010 ATG16L2 ATG16B|WDR80 autophagy related 16 like 2 protein-coding 210-2 chr3 183462571 183462969 + 1.07692 NA Intergenic Intergenic 8956 NR_145763 109617007 NR_145763 ENSG00000199363 SNORA63E - small nucleolar RNA, H/ACA box 63E snoRNA 166.308 chr1 79852683 79852933 + 1.07692 NA Intergenic Intergenic -682947 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 209.461 chr9 73902816 73903064 + 1.07692 NA Intergenic Intergenic -468591 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA 204.307 chr12 89930441 89930760 + 1.07692 NA Intergenic Intergenic -17093 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA 190.154-4 chr2 174512890 174513132 + 1.07692 NA Intergenic Intergenic -25923 NM_001267051 151556 Hs.516604 NM_152529 ENSG00000163328 GPR155 DEP.7|DEPDC3|PGR22 G protein-coupled receptor 155 protein-coding 271.846 chr11 13649102 13649476 + 1.07692 NA Intergenic MER21-int|LTR|ERVL -19379 NM_032228 84188 Hs.501991 NM_032228 ENSG00000197601 FAR1 MLSTD2|PFCRD|SDR10E1 fatty acyl-CoA reductase 1 protein-coding 155.308-3 chr12 106457748 106458033 + 1.07692 NA intron (NM_001160708, intron 21 of 27) L2b|LINE|L2 99808 NM_001160708 55703 Hs.62696 NM_018082 ENSG00000013503 POLR3B C128|HLD8|INMAP|RPC2 RNA polymerase III subunit B protein-coding 174.461-3 chr9 72038334 72038543 + 1.07692 NA Intergenic AluSz|SINE|Alu 22167 NM_001128618 138240 Hs.371235 NM_001128618 ENSG00000204669 C9orf57 - chromosome 9 open reading frame 57 protein-coding 216.462-2 chr7 115803503 115803863 + 1.07692 NA Intergenic Intergenic 164630 NM_001244583 22797 Hs.125962 NM_012252 ENSG00000105967 TFEC TCFEC|TFE-C|TFEC-L|TFECL|bHLHe34|hTFEC-L transcription factor EC protein-coding 164.846-2 chr11 82987219 82987478 + 1.07692 NA intron (NM_001286059, intron 4 of 4) intron (NM_001286059, intron 4 of 4) 46926 NM_001286059 27314 Hs.40758 NM_014488 ENSG00000137502 RAB30 - RAB30, member RAS oncogene family protein-coding 158.923-2 chr11 114452446 114452637 + 1.07692 NA Intergenic Intergenic 13074 NM_015523 25996 Hs.677190 NM_015523 ENSG00000076043 REXO2 CGI-114|REX2|RFN|SFN RNA exonuclease 2 protein-coding 218.077 chr1 163449128 163449438 + 1.07692 NA Intergenic Intergenic -26092 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo 189.846-3 chr12 5631089 5631314 + 1.07692 NA intron (NM_001278596, intron 17 of 25) intron (NM_001278596, intron 17 of 25) 137069 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding 248.077 chr2 142317404 142317839 + 1.07692 NA Intergenic L1MD3|LINE|L1 -185920 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding 170.692-2 chr14 51782532 51782755 + 1.07692 NA Intergenic L1ME1|LINE|L1 65360 NM_001267047 122786 Hs.434914 NM_152330 ENSG00000139926 FRMD6 C14orf31|EX1|Willin|c14_5320 FERM domain containing 6 protein-coding 280.538 chr11 112398221 112398553 + 1.07692 NA Intergenic MIRb|SINE|MIR -83845 NR_120559 101928823 Hs.126118 NR_120559 ENSG00000254968 LINC02763 - long intergenic non-protein coding RNA 2763 ncRNA 208.23 chr10 64521577 64522361 + 1.07692 NA Intergenic L2|LINE|L2 -303559 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 192.692 chr2 116999015 116999672 + 1.07692 NA Intergenic Intergenic -815348 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 330 chr15 60530903 60531529 + 1.07692 NA TTS (NR_120339) TTS (NR_120339) 52038 NR_120340 101928784 Hs.655155 NR_120339 ENSG00000245534 RORA-AS1 - RORA antisense RNA 1 ncRNA 200.153 chr2 9335065 9335327 + 1.07692 NA intron (NM_003887, intron 9 of 27) intron (NM_003887, intron 9 of 27) 87395 NM_001319068 9270 Hs.467662 NM_004763 ENSG00000119185 ITGB1BP1 ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B integrin subunit beta 1 binding protein 1 protein-coding 276.23-2 chr2 98857525 98857877 + 1.07692 NA intron (NM_207362, intron 1 of 9) L1MB7|LINE|L1 78524 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding 196.23 chr4 176543952 176544189 + 1.07692 NA Intergenic MIRb|SINE|MIR 224104 NM_021928 60559 Hs.42194 NM_021928 ENSG00000129128 SPCS3 PRO3567|SPC22/23|SPC3|YLR066W signal peptidase complex subunit 3 protein-coding 165.538-4 chr3 109553496 109553772 + 1.07692 NA Intergenic Intergenic -49194 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA 152.384-2 chr2 51831670 51831858 + 1.07692 NA intron (NR_135237, intron 6 of 10) intron (NR_135237, intron 6 of 10) -538884 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 156.923-2 chr11 42193973 42194200 + 1.07692 NA intron (NR_038309, intron 4 of 5) intron (NR_038309, intron 4 of 5) 59604 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA 227.154 chr12 66319676 66319952 + 1.07692 NA intron (NM_001370285, intron 7 of 12) intron (NM_001370285, intron 7 of 12) 17269 NM_033647 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding 279.846 chr2 109059453 109059758 + 1.07692 NA Intergenic Intergenic -69600 NM_001099289 344558 Hs.171244 NM_001099289 ENSG00000172985 SH3RF3 POSH2|SH3MD4 SH3 domain containing ring finger 3 protein-coding 203.846-2 chr14 71243800 71244023 + 1.07692 NA Intergenic Intergenic -76565 NM_001284245 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 187.154-3 chr5 43221046 43221291 + 1.07692 NA intron (NR_072980, intron 1 of 3) intron (NR_072980, intron 1 of 3) 28316 NR_072980 167359 Hs.25845 NM_153361 ENSG00000177453 NIM1K NIM1 NIM1 serine/threonine protein kinase protein-coding 219.538 chr2 15528318 15528705 + 1.07692 NA intron (NR_052013, intron 9 of 50) (TA)n|Simple_repeat|Simple_repeat 32823 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 197.461 chr5 106613477 106613860 + 1.07692 NA Intergenic Intergenic 397346 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 175.538-6 chr7 86330630 86330963 + 1.07692 NA Intergenic L1M5|LINE|L1 -313113 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding 157.846-6 chr11 81965343 81965532 + 1.07692 NA intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -74601 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 163.23 chr12 87220454 87220648 + 1.07692 NA Intergenic Intergenic -110188 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA 192.538-3 chr6 48174241 48174494 + 1.07692 NA Intergenic L1MC5a|LINE|L1 -105678 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 233.692 chr2 70247658 70247976 + 1.07692 NA intron (NM_001351511, intron 1 of 12) intron (NM_001351511, intron 1 of 12) 811 NM_001351514 7072 Hs.413123 NM_022037 ENSG00000116001 TIA1 TIA-1|WDM TIA1 cytotoxic granule associated RNA binding protein protein-coding 267.076 chr12 13047273 13047596 + 1.07692 NA intron (NM_020853, intron 1 of 12) intron (NM_020853, intron 1 of 12) 3053 NM_020853 57613 Hs.132660 NM_020853 ENSG00000084444 FAM234B KIAA1467 family with sequence similarity 234 member B protein-coding 176.923-8 chr4 30369046 30369260 + 1.07692 NA Intergenic Intergenic -351216 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 223.999 chr4 81796300 81796511 + 1.07692 NA Intergenic Intergenic -324498 NM_152545 153020 Hs.591696 NM_152545 ENSG00000138670 RASGEF1B GPIG4 RasGEF domain family member 1B protein-coding 189.461 chr13 87104506 87104681 + 1.07692 NA Intergenic L1M1|LINE|L1 192673 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA 399.23 chr17 61838798 61839316 + 1.07692 NA intron (NM_032043, intron 6 of 19) intron (NM_032043, intron 6 of 19) 24502 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding 185.154-4 chr6 42623812 42624058 + 1.07692 NA intron (NM_001363705, intron 11 of 46) L1MEg1|LINE|L1 59906 NM_001184801 23304 Hs.529925 NM_015255 ENSG00000024048 UBR2 C6orf133|bA49A4.1|dJ242G1.1|dJ392M17.3 ubiquitin protein ligase E3 component n-recognin 2 protein-coding 161.692 chr1 34619302 34619526 + 1.07692 NA Intergenic MLT1F2|LTR|ERVL-MaLR 50280 NR_030278 693137 NR_030278 ENSG00000207941 MIR552 MIRN552|hsa-mir-552 microRNA 552 ncRNA 274.153 chr8 80491426 80491882 + 1.07692 NA intron (NM_001105539, intron 1 of 5) intron (NM_001105539, intron 1 of 5) 5428 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding 155.538-16 chr8 77685963 77686136 + 1.07692 NA Intergenic MSTA-int|LTR|ERVL-MaLR 235352 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA 178.615-2 chr12 47548131 47548391 + 1.07692 NA Intergenic Tigger1|DNA|TcMar-Tigger 133253 NR_149087 111082992 Hs.380659 NR_149087 LINC02156 - long intergenic non-protein coding RNA 2156 ncRNA 248-2 chrX 87861024 87861494 + 1.07692 NA Intergenic L1MC4a|LINE|L1 343457 NM_057162 56062 Hs.49075 NM_019117 ENSG00000102271 KLHL4 DKELCHL|KHL4 kelch like family member 4 protein-coding 270.615 chr22 26511090 26511667 + 1.07692 NA intron (NM_001346858, intron 2 of 15) MLT2A1|LTR|ERVL 1095 NM_012143 24144 Hs.20225 NM_012143 ENSG00000100109 TFIP11 NTR1|STIP|STIP-1|Spp382|TIP39|bK445C9.6 tuftelin interacting protein 11 protein-coding 160.154-3 chr1 166767709 166767985 + 1.07692 NA Intergenic Intergenic -71628 NM_001314014 57645 Hs.432752 NM_017542 ENSG00000143157 POGK BASS2|KRBOX2|LST003 pogo transposable element derived with KRAB domain protein-coding 215.23 chr9 76395807 76396118 + 1.07692 NA Intergenic MER34|LTR|ERV1 -1536 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding 179-3 chr19 53356189 53356523 + 1.07692 NA TTS (NM_001321522) TTS (NM_001321522) -9349 NR_145447 170958 Hs.352638 NM_001348156 ENSG00000203326 ZNF525 - zinc finger protein 525 protein-coding 193.307 chr17 54982159 54982412 + 1.07692 NA intron (NM_178509, intron 1 of 17) intron (NM_178509, intron 1 of 17) -13500 NM_001162861 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding 187.153 chr8 76959760 76960111 + 1.07692 NA Intergenic Intergenic 6915 NR_130460 100422921 NR_130460 ENSG00000266712 MIR3149 - microRNA 3149 ncRNA 173.385-2 chr14 88965241 88965511 + 1.07692 NA Intergenic MIR3|SINE|MIR 140725 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 238.615 chr2 125207237 125207697 + 1.07692 NA Intergenic Intergenic 910518 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 220.154-2 chr14 20468250 20468864 + 1.07692 NA promoter-TSS (NM_000270) promoter-TSS (NM_000270) -822 NM_000270 4860 Hs.75514 NM_000270 ENSG00000198805 PNP NP|PRO1837|PUNP purine nucleoside phosphorylase protein-coding 266.154-2 chr15 63040928 63041577 + 1.07692 NA Intergenic Intergenic -1495 NM_001018006 7168 Hs.133892 NM_000366 ENSG00000140416 TPM1 C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA tropomyosin 1 protein-coding 218.461-2 chr14 68407122 68407539 + 1.07692 NA intron (NM_133509, intron 8 of 10) Tigger3b|DNA|TcMar-Tigger 221457 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 171.538-8 chr6 116889223 116889516 + 1.07692 NA intron (NM_173560, intron 4 of 18) intron (NM_173560, intron 4 of 18) 12127 NM_173560 222546 Hs.352276 NM_173560 ENSG00000185002 RFX6 MTCHRS|MTFS|RFXDC1|dJ955L16.1 regulatory factor X6 protein-coding 220.846-2 chr11 19202298 19202683 + 1.07692 NA promoter-TSS (NM_001369404) promoter-TSS (NM_001369404) -507 NM_001369404 8048 Hs.83577 NM_003476 ENSG00000129170 CSRP3 CLP|CMD1M|CMH12|CRP3|LMO4|MLP cysteine and glycine rich protein 3 protein-coding 205.846-2 chr18 13753912 13754155 + 1.07692 NA intron (NM_003799, intron 10 of 11) intron (NM_003799, intron 10 of 11) 27360 NM_003799 8731 Hs.592347 NM_003799 ENSG00000101654 RNMT CMT1|CMT1c|MET|Met|RG7MT1|cm1p|hCMT1|hMet RNA guanine-7 methyltransferase protein-coding 164.231-7 chr20 62182021 62182262 + 1.07692 NA promoter-TSS (NM_015666) promoter-TSS (NM_015666) -884 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding 184.923-2 chr10 55905902 55906226 + 1.07692 NA Intergenic MER20B|DNA|hAT-Charlie -278122 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 178.154 chr1 180661992 180662232 + 1.07692 NA intron (NR_137330, intron 1 of 12) L1MA3|LINE|L1 30090 NM_001328662 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding 195.846 chr14 32896627 32896854 + 1.07692 NA Intergenic Intergenic -42139 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 189.615-2 chr3 95965798 95966134 + 1.07692 NA Intergenic Intergenic -282773 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 160.615-9 chr2 41732224 41732478 + 1.07692 NA Intergenic Intergenic -145204 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 264.923 chr9 33199950 33200418 + 1.07692 NA Intergenic MER4D|LTR|ERV1 32325 NR_108108 101929639 Hs.545818 NR_108108 ENSG00000233554 B4GALT1-AS1 - B4GALT1 antisense RNA 1 ncRNA 168.923-5 chr4 173920603 173920920 + 1.07692 NA intron (NR_146487, intron 1 of 2) intron (NR_146487, intron 1 of 2) 23488 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA 208.769 chr12 45746417 45746722 + 1.07692 NA intron (NM_152641, intron 3 of 20) intron (NM_152641, intron 3 of 20) 16860 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding 237.615 chr11 42672237 42672588 + 1.07692 NA Intergenic L1MC3|LINE|L1 -418722 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA 191.846-3 chr7 138099497 138099818 + 1.07692 NA intron (NM_001190906, intron 4 of 7) L1MEh|LINE|L1 23198 NM_001190906 6718 Hs.201667 NM_005989 ENSG00000122787 AKR1D1 3o5bred|CBAS2|SRD5B1 aldo-keto reductase family 1 member D1 protein-coding 164.308-11 chr5 85857219 85857422 + 1.07692 NA Intergenic Tigger1|DNA|TcMar-Tigger -425124 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 239-2 chr7 123569238 123569627 + 1.07692 NA intron (NR_111926, intron 4 of 7) intron (NR_111926, intron 4 of 7) -11528 NM_001282422 4698 Hs.651219 NM_005000 ENSG00000128609 NDUFA5 B13|CI-13KD-B|CI-13kB|NUFM|UQOR13 NADH:ubiquinone oxidoreductase subunit A5 protein-coding 233.384 chr1 97570124 97570400 + 1.07692 NA intron (NM_000110, intron 11 of 22) intron (NM_000110, intron 11 of 22) -226659 NR_046591 100873933 Hs.568669 NR_046591 ENSG00000235777 DPYD-AS2 - DPYD antisense RNA 2 ncRNA 234-3 chr8 80328859 80329311 + 1.07692 NA Intergenic Intergenic 87696 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA 239.384 chr4 58746056 58746665 + 1.07692 NA Intergenic Intergenic -210032 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA 186.923 chr1 108169663 108169994 + 1.07692 NA intron (NM_013386, intron 3 of 9).2 L1MEd|LINE|L1 23007 NM_213651 29957 Hs.656870 NM_013386 ENSG00000085491 SLC25A24 APC1|SCAMC-1|SCAMC1 solute carrier family 25 member 24 protein-coding 182.846-4 chr9 15292856 15293058 + 1.07692 NA intron (NM_001168341, intron 1 of 17) Tigger3b|DNA|TcMar-Tigger 14403 NM_152574 158219 Hs.563630 NM_152574 ENSG00000155158 TTC39B C9orf52 tetratricopeptide repeat domain 39B protein-coding 190.615-4 chr22 26553668 26553868 + 1.07692 NA intron (NM_001362923, intron 1 of 7) MER2|DNA|TcMar-Tigger 1555 NR_031615 100313914 NR_031615 ENSG00000221760 MIR548J MIRN548J|hsa-mir-548j microRNA 548j ncRNA 241.23 chr2 35731965 35732269 + 1.07692 NA Intergenic Intergenic 260712 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 232.769-2 chr4 170414039 170414384 + 1.07692 NA Intergenic Tigger13a|DNA|TcMar-Tigger 187620 NR_125889 101928223 Hs.254617 NR_125889 LINC01612 - long intergenic non-protein coding RNA 1612 ncRNA 201.076 chr8 141568618 141568873 + 1.07692 NA Intergenic Intergenic -61515 NR_102363 389690 Hs.689547 NM_207414 ENSG00000226807 MROH5 - maestro heat like repeat family member 5 (gene/pseudogene) protein-coding 205.23 chr2 120882527 120882732 + 1.07692 NA intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 90348 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding 236-2 chr18 66507536 66507899 + 1.07692 NA intron (NM_001271028, intron 9 of 9) intron (NM_001271028, intron 9 of 9) 96373 NM_021153 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding 230.307 chr12 71238024 71238346 + 1.07692 NA Intergenic MLT1J1|LTR|ERVL-MaLR -80186 NM_004616 7103 Hs.170563 NM_004616 ENSG00000127324 TSPAN8 CO-029|TM4SF3 tetraspanin 8 protein-coding 252.307 chr10 80311314 80311651 + 1.07692 NA Intergenic L1MB5|LINE|L1 -21824 NM_000429 4143 Hs.282670 NM_000429 ENSG00000151224 MAT1A MAT|MATA1|SAMS|SAMS1 methionine adenosyltransferase 1A protein-coding 184.538-3 chr6 48948464 48948781 + 1.07692 NA Intergenic Intergenic 514631 NM_000255 4594 Hs.485527 NM_000255 ENSG00000146085 MMUT MCM|MUT methylmalonyl-CoA mutase protein-coding 166.154-7 chr3 26420036 26420332 + 1.07692 NA Intergenic Intergenic -202622 NM_052953 116135 Hs.517868 NM_052953 ENSG00000179796 LRRC3B LRP15 leucine rich repeat containing 3B protein-coding 163.154-5 chr8 102867933 102868122 + 1.07692 NA intron (NR_126338, intron 1 of 3) MER6C|DNA|TcMar-Tigger 3756 NR_126339 100506753 Hs.602901 NR_126338 AZIN1-AS1 - AZIN1 antisense RNA 1 ncRNA 224.846 chr1 5075237 5075563 + 1.07692 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 420791 NM_018836 55966 Hs.12473 NM_018836 ENSG00000196581 AJAP1 MOT8|SHREW-1|SHREW1 adherens junctions associated protein 1 protein-coding 225.077 chr12 84179992 84180250 + 1.07692 NA Intergenic Intergenic 732678 NM_001146335 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding 272.769 chr20 9281601 9282078 + 1.07692 NA intron (NM_182797, intron 1 of 35) intron (NM_182797, intron 1 of 35) -25961 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding 212.923-2 chr4 146278767 146279155 + 1.07692 NA intron (NM_001029998, intron 10 of 11) intron (NM_001029998, intron 10 of 11) 64423 NM_001371071 159.384-3 chr4 57191867 57192126 + 1.07692 NA intron (NR_034081, intron 2 of 4) MER5A1|DNA|hAT-Charlie -81611 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding 163.307 chr5 68850587 68850864 + 1.07692 NA Intergenic Tigger2|DNA|TcMar-Tigger 179202 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA 193.769-2 chr11 89166391 89166714 + 1.07692 NA Intergenic L1M2|LINE|L1 -11323 NM_000372 7299 Hs.503555 NM_000372 ENSG00000077498 TYR ATN|CMM8|OCA1|OCA1A|OCAIA|SHEP3 tyrosinase protein-coding 187.23-2 chr5 120315664 120315920 + 1.07692 NA Intergenic Intergenic -148486 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding 223.538-3 chr4 32933648 32933988 + 1.07692 NA Intergenic MLT1E1A|LTR|ERVL-MaLR 582780 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 169.538-6 chr2 81776247 81776454 + 1.07692 NA Intergenic L1MC2|LINE|L1 -309404 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 204.923-5 chr6 62982622 62982865 + 1.07692 NA Intergenic L1MEc|LINE|L1 337234 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding 161.154-8 chr7 16894184 16894338 + 1.07692 NA Intergenic Intergenic -12278 NM_176813 155465 Hs.100686 NM_176813 ENSG00000173467 AGR3 AG-3|AG3|BCMP11|HAG3|PDIA18|hAG-3 anterior gradient 3, protein disulphide isomerase family member protein-coding 163.846-9 chr20 40757021 40757467 + 1.07692 NA Intergenic Intergenic -42621 NR_145814 109623474 NR_145814 SNORD154 - small nucleolar RNA, C/D box 154 snoRNA 184.846-12 chr9 26503200 26503424 + 1.07692 NA Intergenic Intergenic 389490 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 169.538-2 chr11 130469980 130470155 + 1.07692 NA intron (NM_139055, intron 5 of 7) Charlie4a|DNA|hAT-Charlie 21093 NM_139055 170689 Hs.534221 NM_139055 ENSG00000166106 ADAMTS15 - ADAM metallopeptidase with thrombospondin type 1 motif 15 protein-coding 185.385 chr14 52433034 52433347 + 1.07692 NA intron (NM_001160047, intron 20 of 20) intron (NM_001160047, intron 20 of 20) 118878 NM_000956 5732 Hs.2090 NM_000956 ENSG00000125384 PTGER2 EP2 prostaglandin E receptor 2 protein-coding 249.153 chr5 103847548 103847850 + 1.07692 NA Intergenic Intergenic -284910 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding 211.384 chr2 136881201 136881530 + 1.07692 NA intron (NM_001316349, intron 1 of 27) intron (NM_001316349, intron 1 of 27) 115820 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 270.846 chr10 64157005 64157413 + 1.07692 NA Intergenic Intergenic -635319 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 178.23 chr15 86009019 86009219 + 1.07692 NA Intergenic A-rich|Low_complexity|Low_complexity -70501 NM_152336 123624 Hs.31795 NM_152336 ENSG00000273540 AGBL1 CCP4|FECD8 ATP/GTP binding protein like 1 protein-coding 246.384 chr15 85908482 85908795 + 1.07692 NA Intergenic Intergenic 83003 NR_049805 100847084 NR_049805 ENSG00000264406 MIR548AP - microRNA 548ap ncRNA 182.769-5 chr2 7698130 7698604 + 1.07692 NA Intergenic Intergenic 201288 NR_110256 101929551 Hs.116006 NR_110256 ENSG00000226506 LOC101929551 - uncharacterized LOC101929551 ncRNA 179.692-8 chr9 29631765 29631973 + 1.07692 NA Intergenic L1MCa|LINE|L1 -418268 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 177.384 chr7 38782607 38782951 + 1.07692 NA intron (NM_014396, intron 10 of 28) intron (NM_014396, intron 10 of 28) -95690 NR_028347 340286 Hs.144075 NM_001105282 ENSG00000164556 FAM183BP FAM183B|THEG6 acyloxyacyl hydrolase (neutrophil) pseudo 163.769 chr1 57834702 57835101 + 1.07692 NA intron (NM_001353980, intron 3 of 5) intron (NM_001353980, intron 3 of 5) -25680 NR_104365 101926890 Hs.662207 NR_104362 ENSG00000226759 DAB1-AS1 - DAB1 antisense RNA 1 ncRNA 182.077-5 chr8 109460700 109461125 + 1.07692 NA intron (NM_177531, intron 47 of 77) MLT1I|LTR|ERVL-MaLR -78788 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding 197.538-2 chr19 29347549 29348131 + 1.07692 NA intron (NR_040029, intron 9 of 9) L1MB3|LINE|L1 -134689 NM_006003 7386 Hs.743307 NM_006003 ENSG00000169021 UQCRFS1 RIP1|RIS1|RISP|UQCR5 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein-coding 160.154-2 chr1 119892165 119892478 + 1.07692 NA Intergenic Intergenic 4194 NM_021794 11085 Hs.283011 NM_021794 ENSG00000134249 ADAM30 svph4 ADAM metallopeptidase domain 30 protein-coding 250.923-3 chr5 85127539 85127989 + 1.07692 NA Intergenic Intergenic -742884 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 215.923 chr14 40393867 40394233 + 1.07692 NA Intergenic Intergenic -560661 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 173.307 chr6 53534993 53535303 + 1.07692 NA intron (NM_001498, intron 1 of 15) FLAM_A|SINE|Alu 9953 NM_001498 2729 Hs.654465 NM_001498 ENSG00000001084 GCLC GCL|GCS|GLCL|GLCLC glutamate-cysteine ligase catalytic subunit protein-coding 218.462-4 chr8 136256060 136256454 + 1.07692 NA Intergenic LTR16A|LTR|ERVL -274541 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 175.231 chr16 24821347 24821692 + 1.07692 NA intron (NM_014494, intron 22 of 24) intron (NM_014494, intron 22 of 24) -24344 NM_001258411 115584 Hs.164118 NM_052944 ENSG00000158865 SLC5A11 KST1|RKST1|SGLT6|SMIT2 solute carrier family 5 member 11 protein-coding 163.538 chr10 79332147 79332383 + 1.07692 NA Intergenic L1ME2|LINE|L1 -15204 NM_005729 10105 Hs.381072 NM_005729 ENSG00000108179 PPIF CYP3|CyP-M|Cyp-D|CypD peptidylprolyl isomerase F protein-coding 164.385-2 chr15 37784608 37784862 + 1.07692 NA Intergenic Intergenic -149872 NM_001330255 145942 Hs.179646 NM_152453 ENSG00000166069 TMCO5A TMCO5 transmembrane and coiled-coil domains 5A protein-coding 314.769 chr2 81901147 81901806 + 1.07692 NA Intergenic L1MC3|LINE|L1 -434530 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 152.153 chr17 17972728 17972887 + 1.07692 NA promoter-TSS (NM_001288789) promoter-TSS (NM_001288789) -6 NM_001130090 83450 Hs.579264 NM_031294 ENSG00000171962 DRC3 CFAP134|LRRC48 dynein regulatory complex subunit 3 protein-coding 187.538-3 chr14 68820761 68821239 + 1.07692 NA Intergenic Intergenic -24757 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding 242.461 chrX 76189659 76190027 + 1.07692 NA Intergenic L1MA10|LINE|L1 16781 NM_016500 51260 Hs.370100 NM_016500 ENSG00000102390 PBDC1 CXorf26 polysaccharide biosynthesis domain containing 1 protein-coding 239.231-2 chr5 107930797 107931245 + 1.07692 NA intron (NM_001163315, intron 7 of 8) intron (NM_001163315, intron 7 of 8) -260084 NM_001962 1946 Hs.288741 NM_001962 ENSG00000184349 EFNA5 AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS ephrin A5 protein-coding 154.154-14 chr4 5944050 5944314 + 1.07692 NA Intergenic Intergenic -20854 NR_039608 100616201 NR_039608 ENSG00000263631 MIR378D1 mir-378d-1 microRNA 378d-1 ncRNA 185.154-3 chr4 60143392 60143753 + 1.07692 NA Intergenic Intergenic -779047 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 221.384 chrX 98781022 98781316 + 1.07692 NA Intergenic Intergenic -1216634 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA 290.769 chr1 29032788 29033290 + 1.07692 NA intron (NM_001166007, intron 8 of 17) intron (NM_001166007, intron 8 of 17) 89462 NM_001171868 399474 Hs.712722 NM_001003682 ENSG00000253304 TMEM200B TTMB transmembrane protein 200B protein-coding 246.154 chr17 55032015 55032380 + 1.07692 NA intron (NM_178509, intron 9 of 17) intron (NM_178509, intron 9 of 17) -63412 NM_001162861 1353 Hs.591171 NM_004375 ENSG00000166260 COX11 COX11P cytochrome c oxidase copper chaperone COX11 protein-coding 230.538 chr11 98888170 98888488 + 1.07692 NA Intergenic L1MC1|LINE|L1 -132620 NM_014361 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 171.538-6 chr3 192229398 192229589 + 1.07692 NA intron (NM_004113, intron 4 of 5) intron (NM_004113, intron 4 of 5) -9137 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 206.615-3 chr17 59696360 59696648 + 1.07692 NA TTS (NM_016077) TTS (NM_016077) 11094 NM_016077 51651 Hs.12677 NM_016077 ENSG00000141378 PTRH2 BIT1|CFAP37|CGI-147|IMNEPD|PTH|PTH 2|PTH2 peptidyl-tRNA hydrolase 2 protein-coding 193.153 chr17 31383346 31383539 + 1.07692 NA Intergenic L1ME4b|LINE|L1 -8233 NM_032932 84440 Hs.406788 NM_032932 ENSG00000131242 RAB11FIP4 FIP4-Rab11|RAB11-FIP4 RAB11 family interacting protein 4 protein-coding 173.923-2 chr12 55238217 55238405 + 1.07692 NA Intergenic L1MB5|LINE|L1 -8977 NM_001005490 254783 Hs.554556 NM_001005490 ENSG00000197706 OR6C74 - olfactory receptor family 6 subfamily C member 74 protein-coding 230.154 chr3 98439237 98439767 + 1.07692 NA Intergenic L1MC4|LINE|L1 -29978 NM_001004736 26339 Hs.621533 NM_001004736 ENSG00000232382 OR5K1 HSHTPCRX10|HTPCRX10|OR3-8 olfactory receptor family 5 subfamily K member 1 protein-coding 152.615-5 chr6 55526860 55527099 + 1.07692 NA intron (NM_001287746, intron 4 of 9) intron (NM_001287746, intron 4 of 9) 52235 NM_001287741 54511 Hs.147054 NM_019036 ENSG00000146151 HMGCLL1 bA418P12.1|er-cHL 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 protein-coding 160.692-2 chr17 32660863 32661166 + 1.07692 NA intron (NM_015194, intron 16 of 21) intron (NM_015194, intron 16 of 21) 174021 NM_003885 8851 Hs.500015 NM_003885 ENSG00000176749 CDK5R1 CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a cyclin dependent kinase 5 regulatory subunit 1 protein-coding 197-4 chr9 14929426 14929739 + 1.07692 NA Intergenic L1ME3|LINE|L1 -18587 NR_163238 158326 Hs.50850 NM_144966 ENSG00000164946 FREM1 BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 FRAS1 related extracellular matrix 1 protein-coding 181.692 chr1 58812049 58812371 + 1.07692 NA intron (NR_108106, intron 1 of 1) intron (NR_108106, intron 1 of 1) 27059 NR_108106 100131060 Hs.680604 NR_034014 ENSG00000234807 LINC01135 - long intergenic non-protein coding RNA 1135 ncRNA 190.154-8 chr4 106450040 106450751 + 1.07692 NA intron (NR_147150, intron 3 of 3) MER68|LTR|ERVL 16771 NR_147150 105377355 Hs.253188 NR_147150 ENSG00000249613 LINC02173 - long intergenic non-protein coding RNA 2173 ncRNA 301.846 chr15 93621367 93621747 + 1.07692 NA Intergenic L1ME3C|LINE|L1 -235003 NR_120321 101927153 Hs.371900 NR_120321 LINC02207 - long intergenic non-protein coding RNA 2207 ncRNA 212.461 chr20 10962021 10962357 + 1.07692 NA Intergenic Intergenic -52917 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA 167.23 chr1 100439475 100439879 + 1.07692 NA intron (NM_001319212, intron 5 of 13) MIR|SINE|MIR 87171 NM_001319210 8556 Hs.127411 NM_003672 ENSG00000079335 CDC14A DFNB105|DFNB32|DFNB35|cdc14|hCDC14 cell division cycle 14A protein-coding 268.692 chr2 78553801 78554103 + 1.07692 NA intron (NR_136311, intron 2 of 2) intron (NR_136311, intron 2 of 2) 8421 NR_136312 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA 182.923-3 chr21 32267933 32268183 + 1.07692 NA TTS (NM_018944) TTS (NM_018944) 10991 NM_018944 54069 Hs.190518 NM_018944 ENSG00000159055 MIS18A B28|C21orf45|C21orf46|FASP1|MIS18alpha|hMis18alpha MIS18 kinetochore protein A protein-coding 215.307 chr1 82688464 82688783 + 1.07692 NA Intergenic Tigger2|DNA|TcMar-Tigger -214560 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA 180.846-4 chr8 130713307 130713654 + 1.07692 NA Intergenic L1MA10|LINE|L1 -269806 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 202-2 chr5 73170075 73170553 + 1.07692 NA Intergenic LTR50|LTR|ERVL -2879 NM_153217 134288 Hs.508588 NM_153217 ENSG00000164325 TMEM174 - transmembrane protein 174 protein-coding 226.922 chr2 201098674 201098989 + 1.07692 NA Intergenic AluY|SINE|Alu -17273 NM_001127184 8837 Hs.390736 NM_003879 ENSG00000003402 CFLAR CASH|CASP8AP1|CLARP|Casper|FLAME|FLAME-1|FLAME1|FLIP|I-FLICE|MRIT|c-FLIP|c-FLIPL|c-FLIPR|c-FLIPS|cFLIP CASP8 and FADD like apoptosis regulator protein-coding 172.153 chr9 75286867 75287235 + 1.07692 NA Intergenic L1PA13|LINE|L1 198537 NM_012383 26578 Hs.494192 NM_012383 ENSG00000134996 OSTF1 OSF|SH3P2|bA235O14.1 osteoclast stimulating factor 1 protein-coding 203.077-5 chr3 121447602 121447969 + 1.07692 NA intron (NM_199420, intron 26 of 29) L1MA3|LINE|L1 98203 NM_199420 10721 Hs.241517 NM_199420 ENSG00000051341 POLQ PRO0327 DNA polymerase theta protein-coding 238.461 chr5 125943511 125943850 + 1.07692 NA Intergenic Intergenic -235897 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA 242.308 chr6 56041103 56041521 + 1.07692 NA Intergenic Intergenic 50350 NM_001318753 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 154.846-2 chr10 54956465 54956787 + 1.07692 NA intron (NM_001354404, intron 3 of 34) intron (NM_001354404, intron 3 of 34) -155335 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 207.538-4 chr8 82932346 82932612 + 1.07692 NA intron (NR_134295, intron 2 of 3) intron (NR_134295, intron 2 of 3) 20375 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA 164.23 chr6 94256986 94257170 + 1.07692 NA Intergenic Intergenic 538775 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA 156.615-7 chr4 32225415 32225696 + 1.07692 NA Intergenic MIR3|SINE|MIR -125483 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 157.231-10 chr7 37246899 37247092 + 1.07692 NA intron (NM_001206480, intron 6 of 21) LTR37A|LTR|ERV1 106673 NM_001206482 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding 261.077 chr4 113756452 113756887 + 1.07692 NA intron (NM_001321592, intron 2 of 2) intron (NM_001321592, intron 2 of 2) 5069 NM_001321572 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding 182.154-5 chr2 6634222 6634637 + 1.07692 NA promoter-TSS (NR_110500) promoter-TSS (NR_110500) 277 NR_110498 102800315 Hs.729713 NR_110498 ENSG00000236172 LINC01246 - long intergenic non-protein coding RNA 1246 ncRNA 203.154-2 chr3 95886743 95887175 + 1.07692 NA Intergenic Intergenic -203766 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 151.923 chr1 41739805 41740038 + 1.07692 NA intron (NM_024503, intron 1 of 8) intron (NM_024503, intron 1 of 8) 179001 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 211.076 chr3 110278791 110279109 + 1.07692 NA Intergenic L1MEg|LINE|L1 676122 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA 265.615-2 chr5 91999846 92000301 + 1.07692 NA Intergenic Intergenic -616756 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 164-5 chr2 99437446 99437636 + 1.07692 NA intron (NR_135652, intron 6 of 21) intron (NR_135652, intron 6 of 21) 52476 NR_135649 51455 Hs.443077 NM_016316 ENSG00000135945 REV1 AIBP80|REV1L REV1 DNA directed polymerase protein-coding 162.615-3 chr12 45028431 45028599 + 1.07692 NA intron (NM_001004329, intron 2 of 3) intron (NM_001004329, intron 2 of 3) 22584 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding 152-2 chr10 118742203 118742396 + 1.07692 NA intron (NM_153810, intron 1 of 8) intron (NM_153810, intron 1 of 8) 12671 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding 198.461-3 chr9 71186376 71186825 + 1.07692 NA intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) -64979 NM_001366150 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding 213.538 chr4 70099999 70100344 + 1.07692 NA Intergenic Intergenic 32785 NR_003720 286828 Hs.631945 NR_003720 ENSG00000234124 CSN1S2AP CSN1S2A casein alpha s2 like A, pseudogene pseudo 161.539 chr14 26844524 26844811 + 1.07692 NA Intergenic Intergenic -22547 NR_110033 101927062 NR_110033 ENSG00000257845 LINC02294 - long intergenic non-protein coding RNA 2294 ncRNA 207.231-2 chr10 56114591 56115004 + 1.07692 NA Intergenic L1MEf|LINE|L1 246462 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 164.231-6 chr2 182741544 182741770 + 1.07692 NA intron (NR_073367, intron 11 of 22) intron (NR_073367, intron 11 of 22) 25400 NR_073367 54431 Hs.516632 NM_018981 ENSG00000077232 DNAJC10 ERdj5|JPDI|MTHr|PDIA19 DnaJ heat shock protein family (Hsp40) member C10 protein-coding 286.538 chr8 118414274 118414824 + 1.07692 NA intron (NM_001349811, intron 3 of 4) intron (NM_001349811, intron 3 of 4) -206452 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 164.923-2 chr12 10470877 10471185 + 1.07692 NA Intergenic THE1C|LTR|ERVL-MaLR -16346 NM_001304448 3821 Hs.512576 NM_002259 ENSG00000134545 KLRC1 CD159A|NKG2|NKG2A killer cell lectin like receptor C1 protein-coding 192.461-3 chr7 102410640 102411039 + 1.07692 NA intron (NR_038967, intron 8 of 8) L1MD|LINE|L1 -4984 NR_031669 100313829 NR_031669 ENSG00000221510 MIR548O MIRN548O microRNA 548o ncRNA 199.846-3 chr17 52256945 52257163 + 1.07692 NA Intergenic MER4B-int|LTR|ERV1 -97037 NM_001082534 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding 158.846-4 chr3 168634363 168634561 + 1.07692 NA intron (NR_021485, intron 4 of 15) intron (NR_021485, intron 4 of 15) 82608 NR_030294 693136 NR_030294 ENSG00000207717 MIR551B MIRN551B|mir-551b microRNA 551b ncRNA 186.923-14 chrX 81526789 81527192 + 1.07692 NA Intergenic L1PA16|LINE|L1 324888 NM_003022 6451 Hs.108029 NM_003022 ENSG00000131171 SH3BGRL HEL-S-115|SH3BGR SH3 domain binding glutamate rich protein like protein-coding 192.692-2 chr3 119514355 119514599 + 1.07692 NA intron (NM_016589, intron 5 of 6) L1MC4|LINE|L1 15930 NM_016589 51300 Hs.477287 NM_016589 ENSG00000113845 TIMMDC1 C3orf1|MC1DN31 translocase of inner mitochondrial membrane domain containing 1 protein-coding 222.538-2 chr7 144387831 144388203 + 1.07692 NA Intergenic Intergenic 22210 NM_001080413 135935 Hs.558628 NM_001080413 ENSG00000106410 NOBOX OG-2|OG2|OG2X|POF5|TCAG_12042 NOBOX oogenesis homeobox protein-coding 206.538 chr16 79202960 79203226 + 1.07692 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 397644 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 163.615 chr1 73365762 73366222 + 1.07692 NA Intergenic Intergenic 59822 NR_110677 101927295 Hs.436589 NR_110676 ENSG00000233973 LINC01360 - long intergenic non-protein coding RNA 1360 ncRNA 191.692-4 chr7 9869943 9870229 + 1.07692 NA Intergenic Tigger3c|DNA|TcMar-Tigger 235816 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo 248.615 chr3 158221183 158221493 + 1.07692 NA intron (NM_001271838, intron 4 of 9) intron (NM_001271838, intron 4 of 9) 111249 NM_001271838 51319 Hs.591283 NM_016625 ENSG00000174891 RSRC1 BM-011|MRT70|SFRS21|SRrp53 arginine and serine rich coiled-coil 1 protein-coding 158.077-4 chr2 195839236 195839587 + 1.07692 NA intron (NM_018897, intron 47 of 64) L1MEf|LINE|L1 182185 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding 314.846 chr3 171933424 171933899 + 1.07692 NA Intergenic Intergenic -32921 NR_046852 100874219 Hs.730556 NR_046852 ENSG00000234717 TMEM212-AS1 - TMEM212 antisense RNA 1 ncRNA 190.308-2 chr2 27112332 27112639 + 1.07692 NA intron (NM_006569, intron 1 of 5) L1M5|LINE|L1 6642 NM_001166240 10669 Hs.159525 NM_006569 ENSG00000138028 CGREF1 CGR11 cell growth regulator with EF-hand domain 1 protein-coding 177.23 chr2 241370670 241370970 + 1.07692 NA intron (NM_014808, intron 1 of 26) intron (NM_014808, intron 1 of 26) 14535 NM_001282984 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding 242.923-3 chr8 136538677 136538972 + 1.07692 NA intron (NR_147196, intron 2 of 5) Charlie1a|DNA|hAT-Charlie 8026 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 201.538-2 chr4 97241392 97241614 + 1.07692 NA Intergenic L1MC1|LINE|L1 -125423 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA 156.077-4 chr7 120920323 120920598 + 1.07692 NA Intergenic Tigger20a|DNA|TcMar-Tigger -30317 NM_198267 54556 Hs.489811 NM_019071 ENSG00000071243 ING3 Eaf4|ING2|MEAF4|p47ING3 inhibitor of growth family member 3 protein-coding 225.692-9 chr7 9626648 9626913 + 1.07692 NA Intergenic Intergenic -7490 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo 210.923 chr15 99463324 99463694 + 1.07692 NA Intergenic L1MD1|LINE|L1 -101908 NM_001352617 4205 Hs.268675 NM_005587 ENSG00000068305 MEF2A ADCAD1|RSRFC4|RSRFC9|mef2 myocyte enhancer factor 2A protein-coding 248.154 chr2 135285737 135286215 + 1.07692 NA intron (NM_001286569, intron 8 of 21) intron (NM_001286569, intron 8 of 21) 149348 NR_145723 109616967 NR_145723 ENSG00000208308 SNORA40B - small nucleolar RNA, H/ACA box 40B snoRNA 168.538-4 chrX 88322685 88323091 + 1.07692 NA Intergenic AluSx1|SINE|Alu -424337 NM_033048 53336 Hs.458292 NM_033048 ENSG00000147183 CPXCR1 CT77 CPX chromosome region candidate 1 protein-coding 186-2 chr12 20744368 20744653 + 1.07692 NA intron (NM_017435, intron 13 of 14) L1MC5|LINE|L1 49045 NM_001145944 53919 Hs.47261 NM_017435 ENSG00000139155 SLCO1C1 OATP-F|OATP1|OATP14|OATP1C1|OATPF|OATPRP5|SLC21A14 solute carrier organic anion transporter family member 1C1 protein-coding 181.153 chr15 62776496 62776804 + 1.07692 NA intron (NM_015059, intron 39 of 55) intron (NM_015059, intron 39 of 55) -47307 NR_029709 406965 NR_029709 ENSG00000211137 MIR190A MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a microRNA 190a ncRNA 264.461 chr17 59818245 59818857 + 1.07692 NA intron (NM_001329400, intron 8 of 9) AluSp|SINE|Alu -22715 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 161.231-5 chr21 20694685 20694919 + 1.07692 NA Intergenic L1MEc|LINE|L1 108306 NR_024090 387486 Hs.576551 NR_024090 ENSG00000224924 LINC00320 C21orf131|NCRNA00320|PRED14 long intergenic non-protein coding RNA 320 ncRNA 211.077-4 chr15 76079985 76080228 + 1.07692 NA intron (NM_152335, intron 1 of 10) AluSx1|SINE|Alu 20121 NM_152335 123591 Hs.661411 NM_152335 ENSG00000169758 TMEM266 C15orf27|HVRP1|HsHVRP1|hTMEM266 transmembrane protein 266 protein-coding 248.769 chr15 66849045 66849349 + 1.07692 NA Intergenic Intergenic 107318 NR_135687 102723481 Hs.512978 NR_135687 ENSG00000259289 LINC02206 - long intergenic non-protein coding RNA 2206 ncRNA 166.615-5 chr3 44475401 44475693 + 1.07692 NA intron (NM_181489, intron 1 of 7) intron (NM_181489, intron 1 of 7) 2123 NM_001369454 353274 Hs.250481 NM_181489 ENSG00000185219 ZNF445 ZKSCAN15|ZNF168|ZSCAN47 zinc finger protein 445 protein-coding 157.923-3 chr8 13954314 13954474 + 1.07692 NA Intergenic Tigger1|DNA|TcMar-Tigger 324704 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 157.385-2 chr10 66583624 66583850 + 1.07692 NA intron (NM_001127384, intron 10 of 17) L1PB3|LINE|L1 -342299 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 213.077-3 chr8 118934148 118934482 + 1.07692 NA intron (NM_002546, intron 1 of 4) intron (NM_002546, intron 1 of 4) 17570 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding 175.461 chr8 41012754 41013006 + 1.07692 NA Intergenic Tigger5b|DNA|TcMar-Tigger -115054 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding 168.769-4 chr13 78825666 78825983 + 1.07692 NA intron (NR_046869, intron 1 of 4) MIRb|SINE|MIR 14226 NR_046869 100874126 Hs.577893 NR_046869 LINC00331 NCRNA00331 long intergenic non-protein coding RNA 331 ncRNA 218.077-3 chr11 37877850 37878218 + 1.07692 NA Intergenic L1MC1|LINE|L1 -60567 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA 168.538 chr1 162864346 162864562 + 1.07692 NA intron (NM_178550, intron 1 of 3) L1ME1|LINE|L1 4361 NM_178550 339512 Hs.407631 NM_178550 ENSG00000185860 CCDC190 C1orf110 coiled-coil domain containing 190 protein-coding 264.461-2 chr3 79646259 79646959 + 1.07692 NA intron (NM_002941, intron 1 of 30) L1MA4|LINE|L1 121389 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding 165.077-2 chr12 42854364 42854585 + 1.07692 NA Intergenic Intergenic 162258 NR_135028 105369739 Hs.126660 NR_135028 ENSG00000257114 LINC02450 - long intergenic non-protein coding RNA 2450 ncRNA 201.923 chr1 217058868 217059197 + 1.07692 NA intron (NM_001243509, intron 1 of 8) (ATAGAAT)n|Simple_repeat|Simple_repeat 17960 NM_001243507 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding 236.999 chr4 95871389 95871627 + 1.07692 NA Intergenic Intergenic 31415 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding 193.154-3 chr6 140300264 140300495 + 1.07692 NA Intergenic Intergenic 95127 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA 234.922 chr7 90443353 90443622 + 1.07692 NA Intergenic Intergenic -26152 NM_001365443 102723899 Hs.731917 NM_001365443 LOC102723899 - uncharacterized LOC102723899 protein-coding 164.154-2 chr16 29702578 29702834 + 1.07692 NA Intergenic Intergenic 23526 NM_014298 23475 Hs.513484 NM_014298 ENSG00000103485 QPRT HEL-S-90n|QPRTase quinolinate phosphoribosyltransferase protein-coding 215.692-2 chr20 59872347 59872636 + 1.07692 NA intron (NM_014258, intron 35 of 44) MER44B|DNA|TcMar-Tigger 61146 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding 195.231 chr1 31638460 31638762 + 1.07692 NA intron (NM_012392, intron 1 of 4) intron (NM_012392, intron 1 of 4) 6006 NM_001359651 553115 Hs.470417 NM_012392 ENSG00000162517 PEF1 ABP32|PEF1A penta-EF-hand domain containing 1 protein-coding 253.384 chr2 33843856 33844116 + 1.07692 NA intron (NR_126403, intron 1 of 5) L1M5|LINE|L1 -115769 NR_003143 151325 Hs.528847 NM_207329 ENSG00000239649 MYADML - myeloid associated differentiation marker like (pseudogene) pseudo 184.154-2 chr13 82350290 82350579 + 1.07692 NA Intergenic L1MC3|LINE|L1 -1123451 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA 320.923 chr1 98417957 98418413 + 1.07692 NA Intergenic L1M5|LINE|L1 207474 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA 191.615-2 chr12 46492254 46492582 + 1.07692 NA intron (NR_125380, intron 3 of 3) intron (NR_125380, intron 3 of 3) 108311 NR_125381 100288798 Hs.525922 NR_125377 LOC100288798 - uncharacterized LOC100288798 ncRNA 229.923-3 chr4 66665576 66665889 + 1.07692 NA Intergenic L1ME3G|LINE|L1 388908 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 159.384 chr1 40276648 40276854 + 1.07692 NA intron (NM_005857, intron 6 of 9) Tigger3a|DNA|TcMar-Tigger 18515 NM_005857 10269 Hs.132642 NM_005857 ENSG00000084073 ZMPSTE24 FACE-1|FACE1|HGPS|PRO1|STE24|Ste24p zinc metallopeptidase STE24 protein-coding 172.154-4 chr13 65230960 65231252 + 1.07692 NA Intergenic L1MC5a|LINE|L1 -634941 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA 180.307 chr10 88383179 88383407 + 1.07692 NA intron (NM_018363, intron 4 of 6) Cheshire|DNA|hAT-Charlie 200025 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding 193.23 chr2 50074289 50074615 + 1.07692 NA intron (NM_001330093, intron 19 of 22) intron (NM_001330093, intron 19 of 22) -100249 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 188.231-3 chr13 74852039 74852467 + 1.07692 NA Intergenic Intergenic 299410 NR_034024 338864 Hs.97408 NR_034024 ENSG00000236678 LINC00347 - long intergenic non-protein coding RNA 347 ncRNA 186.461 chr1 221130863 221131220 + 1.07692 NA Intergenic L1MC3|LINE|L1 205255 NR_024236 400804 Hs.722626 NR_024236 ENSG00000234754 C1orf140 - uncharacterized LOC400804 ncRNA 261.384 chr1 110728071 110728551 + 1.07692 NA Intergenic Intergenic -53371 NM_002232 3738 Hs.169948 NM_002232 ENSG00000177272 KCNA3 HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3 potassium voltage-gated channel subfamily A member 3 protein-coding 197.384 chr2 176544135 176544398 + 1.07692 NA Intergenic Intergenic 56786 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA 194.461-2 chr16 4891239 4891638 + 1.07692 NA intron (NM_002705, intron 16 of 21) intron (NM_002705, intron 16 of 21) 43058 NM_001288656 29855 Hs.440219 NM_016936 ENSG00000118900 UBN1 VT|VT4 ubinuclein 1 protein-coding 293.692 chr5 122452214 122452629 + 1.07692 NA intron (NR_051996, intron 3 of 5) intron (NR_051996, intron 3 of 5) 26666 NR_051996 153163 Hs.679757 NR_051996 ENSG00000250328 MGC32805 - uncharacterized LOC153163 ncRNA 216.615-3 chr7 42984118 42984539 + 1.07692 NA Intergenic Tigger1|DNA|TcMar-Tigger 51952 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding 205.846-3 chr18 22741302 22741630 + 1.07692 NA intron (NR_110782, intron 1 of 1) intron (NR_110782, intron 1 of 1) 45371 NR_110782 101927571 Hs.335020 NR_110782 ENSG00000266850 LOC101927571 - uncharacterized LOC101927571 ncRNA 239.692-2 chr11 37262037 37262456 + 1.07692 NA Intergenic Intergenic -663967 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding 184.846-4 chr13 111374775 111374957 + 1.07692 NA Intergenic L1MC5a|LINE|L1 54224 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding 156.23 chr7 32221545 32221811 + 1.07692 NA intron (NM_001322059, intron 1 of 17) intron (NM_001322059, intron 1 of 17) 77650 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 181.307 chr4 30827784 30827997 + 1.07692 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 107521 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 300.769 chr3 102635843 102636149 + 1.07692 NA Intergenic Intergenic 200981 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 212.769-2 chr20 45768626 45768864 + 1.07692 NA Intergenic L1MB5|LINE|L1 23138 NM_080614 140686 Hs.419126 NM_080614 ENSG00000124116 WFDC3 WAP14|dJ447F3.3 WAP four-disulfide core domain 3 protein-coding 160.154-11 chr5 77735035 77735207 + 1.07692 NA intron (NM_004607, intron 1 of 3) Tigger1|DNA|TcMar-Tigger 41218 NM_001297738 6902 Hs.291212 NM_004607 ENSG00000171530 TBCA - tubulin folding cofactor A protein-coding 319.154 chr18 73355094 73355819 + 1.07692 NA Intergenic Intergenic 30515 NR_038340 100505817 Hs.197042 NR_038340 ENSG00000261780 LINC02582 - long intergenic non-protein coding RNA 2582 ncRNA 224.615-2 chr20 12595492 12595756 + 1.07692 NA Intergenic Intergenic 341339 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA 178.307 chr11 76417575 76417828 + 1.07692 NA Intergenic Intergenic -27317 NM_001300942 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding 241.076 chr10 78479936 78480276 + 1.07692 NA Intergenic Intergenic 212764 NR_073447 414243 Hs.55047 NR_073447 ENSG00000230417 LINC00595 C10orf101 long intergenic non-protein coding RNA 595 ncRNA 197.846-2 chr1 210145209 210145474 + 1.07692 NA intron (NM_153262, intron 6 of 7) intron (NM_153262, intron 6 of 7) -87455 NM_001354173 56256 Hs.600545 NM_019605 ENSG00000082497 SERTAD4 DJ667H12.2 SERTA domain containing 4 protein-coding 179.231-4 chr2 139901239 139901504 + 1.07692 NA Intergenic L2b|LINE|L2 685314 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA 182.923-2 chr2 223390046 223390385 + 1.07692 NA Intergenic L1M5|LINE|L1 212146 NM_003469 7857 Hs.516726 NM_003469 ENSG00000171951 SCG2 CHGC|EM66|SN|SgII secretogranin II protein-coding 222.615 chr20 16159374 16159707 + 1.07692 NA Intergenic Intergenic -173658 NR_130924 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA 200.23 chr1 37353515 37353752 + 1.07692 NA Intergenic L1ME4a|LINE|L1 120810 NR_038842 728431 Hs.380738 NR_038842 ENSG00000233621 LINC01137 - long intergenic non-protein coding RNA 1137 ncRNA 181.692-6 chr5 166423000 166423285 + 1.07692 NA Intergenic Intergenic 503228 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA 159.307 chr6 127323541 127323716 + 1.07692 NA intron (NM_001002030, intron 3 of 5) MIRb|SINE|MIR 18779 NM_001139510 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding 256.153 chr14 86407611 86407935 + 1.07692 NA Intergenic MER4A1|LTR|ERV1 473095 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 234.308 chr15 55430599 55430910 + 1.07692 NA exon (NM_130810, exon 10 of 10) exon (NM_130810, exon 10 of 10) -22244 NM_001204451 9236 Hs.285051 NM_004748 ENSG00000260916 CCPG1 CPR8 cell cycle progression 1 protein-coding 243.23 chr14 63764007 63764318 + 1.07692 NA Intergenic Intergenic -36097 NM_030791 81537 Hs.24678 NM_030791 ENSG00000126821 SGPP1 SPP-1|SPPase1 sphingosine-1-phosphate phosphatase 1 protein-coding 230.153 chr2 108236348 108236717 + 1.07692 NA Intergenic LTR76|LTR|ERV1 -3436 NM_001320878 442038 NM_001008743 ENSG00000196228 SULT1C3 ST1C3 sulfotransferase family 1C member 3 protein-coding 201.384 chr2 153205329 153205643 + 1.07692 NA Intergenic Intergenic 273276 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding 175.923-2 chr2 155852660 155852976 + 1.07692 NA Intergenic Intergenic 402113 NR_110249 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 158.846 chr11 81219094 81219293 + 1.07692 NA Intergenic Intergenic -456390 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 215.077 chr14 84612265 84612557 + 1.07692 NA Intergenic Intergenic -659521 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 187.076 chr20 49151767 49152003 + 1.07692 NA intron (NM_004602, intron 4 of 13) intron (NM_004602, intron 4 of 13) 36485 NM_017453 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding 190.615 chr14 62604515 62604877 + 1.07692 NA Intergenic Intergenic 440762 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 202.153 chr11 5546223 5546438 + 1.07692 NA promoter-TSS (NM_001005289) promoter-TSS (NM_001005289) -807 NM_001005289 390067 Hs.554540 NM_001005289 ENSG00000181616 OR52H1 OR11-41|OR11-45 olfactory receptor family 52 subfamily H member 1 protein-coding 174.769 chr13 87852449 87852657 + 1.07692 NA Intergenic Intergenic -42033 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA 311.461 chr17 63074714 63075207 + 1.07692 NA intron (NM_025185, intron 3 of 25) intron (NM_025185, intron 3 of 25) 108725 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 175.923-5 chr6 48458597 48458953 + 1.07692 NA Intergenic Intergenic -390086 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 239.846-2 chr18 13099629 13099913 + 1.07692 NA intron (NM_032142, intron 37 of 44) MER2|DNA|TcMar-Tigger 108409 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding 195.153 chr12 483680 483905 + 1.07692 NA intron (NM_173593, intron 1 of 19) MIRb|SINE|MIR 23853 NM_173593 283358 Hs.504416 NM_173593 ENSG00000139044 B4GALNT3 - beta-1,4-N-acetyl-galactosaminyltransferase 3 protein-coding 173.154-6 chr5 108595894 108596375 + 1.07692 NA Intergenic Intergenic 132127 NR_046368 100652853 Hs.133009 NR_046368 ENSG00000272523 LINC01023 HP07349 long intergenic non-protein coding RNA 1023 ncRNA 226.769-5 chr8 56347742 56348093 + 1.07692 NA Intergenic L1ME3|LINE|L1 -27141 NM_001318049 195814 Hs.170673 NM_138969 ENSG00000170786 SDR16C5 EPHD-2|RDH#2|RDH-E2|RDHE2|retSDR2 short chain dehydrogenase/reductase family 16C member 5 protein-coding 244.154 chr14 24725031 24725316 + 1.07692 NA Intergenic Intergenic -90983 NR_144343 3002 Hs.1051 NM_004131 ENSG00000100453 GZMB C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT granzyme B protein-coding 228.769 chr1 168935445 168935858 + 1.07692 NA intron (NR_104091, intron 3 of 4) L1PB1|LINE|L1 148710 NR_024160 79100 Hs.250624 NR_024160 ENSG00000225826 LINC00626 - long intergenic non-protein coding RNA 626 ncRNA 154.153 chr16 52292631 52292787 + 1.07692 NA Intergenic Kanga1d|DNA|TcMar-Tc2 34145 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA 214.846 chr8 88126149 88126781 + 1.07692 NA intron (NM_005941, intron 4 of 9) L1MA9|LINE|L1 201018 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 193.692-4 chr8 97715679 97715930 + 1.07692 NA intron (NM_001363139, intron 7 of 9) intron (NM_001363139, intron 7 of 9) -59984 NM_018407 55353 Hs.492314 NM_018407 ENSG00000104341 LAPTM4B LAPTM4beta|LC27 lysosomal protein transmembrane 4 beta protein-coding 254.461 chr22 28380513 28380931 + 1.07692 NA intron (NM_001145418, intron 2 of 22) MIRb|SINE|MIR -79147 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA 169.384-4 chr4 83427767 83428007 + 1.07692 NA intron (NM_001297757, intron 11 of 16) L1ME3G|LINE|L1 27936 NM_133636 113510 Hs.480101 NM_133636 ENSG00000163312 HELQ HEL308 helicase, POLQ like protein-coding 186.308 chr10 28126099 28126362 + 1.07692 NA intron (NR_134518, intron 5 of 16) intron (NR_134518, intron 5 of 16) -52852 NR_132973 106635548 NR_132973 SNORD130 - small nucleolar RNA, C/D box 130 snoRNA 238.077 chr20 14280042 14280347 + 1.07692 NA intron (NM_001351663, intron 3 of 17) intron (NM_001351663, intron 3 of 17) 57418 NM_198391 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding 314.692 chr17 58936218 58936885 + 1.07692 NA intron (NM_014906, intron 1 of 6) intron (NM_014906, intron 1 of 6) 170329 NM_001320989 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding 154.154-10 chr2 26226857 26227190 + 1.07692 NA intron (NM_000182, intron 7 of 19) L1ME1|LINE|L1 17609 NM_000182 3030 Hs.516032 NM_000182 ENSG00000084754 HADHA ECHA|GBP|HADH|LCEH|LCHAD|MTPA|TP-ALPHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha protein-coding 190.923-2 chr12 17487174 17487510 + 1.07692 NA Intergenic Intergenic 101736 NR_146522 105369678 NR_146522 LINC02378 - long intergenic non-protein coding RNA 2378 ncRNA 170.076 chr14 69891141 69891298 + 1.07692 NA intron (NM_001034852, intron 1 of 11) L1ME3E|LINE|L1 11803 NM_001034852 64093 Hs.497349 NM_022137 ENSG00000198732 SMOC1 OAS SPARC related modular calcium binding 1 protein-coding 171.538 chr10 58507947 58508242 + 1.07692 NA Intergenic Intergenic -4778 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 266.307 chr11 13968166 13968490 + 1.07692 NA intron (NM_006108, intron 1 of 15) MLT1J|LTR|ERVL-MaLR 5605 NM_006108 10418 Hs.643864 NM_006108 ENSG00000262655 SPON1 VSGP/F-spondin|f-spondin spondin 1 protein-coding 153.461-2 chr5 97387339 97387543 + 1.07692 NA Intergenic Intergenic -117255 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA 203.692-3 chr15 63391408 63391735 + 1.07692 NA intron (NR_120375, intron 1 of 6) L1ME4c|LINE|L1 1341 NR_120375 102723344 Hs.569500 NR_120375 LINC02568 - long intergenic non-protein coding RNA 2568 ncRNA 234.461 chr11 110924904 110925217 + 1.07692 NA Intergenic Intergenic 172258 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA 154.538-5 chr3 174229890 174230104 + 1.07692 NA intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) -309201 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA 253.769 chr14 66520167 66520650 + 1.07692 NA intron (NM_001024218, intron 1 of 21) MLT1K|LTR|ERVL-MaLR 13001 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 164.308-7 chr15 50887349 50887612 + 1.07692 NA Intergenic L1MB8|LINE|L1 -21203 NM_007347 23431 Hs.413366 NM_007347 ENSG00000081014 AP4E1 CPSQ4|SPG51|STUT1 adaptor related protein complex 4 subunit epsilon 1 protein-coding 217 chr22 25923632 25923910 + 1.07692 NA intron (NM_001318245, intron 34 of 43) intron (NM_001318245, intron 34 of 43) 181583 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 175.384-5 chr9 99169129 99169389 + 1.07692 NA Intergenic Intergenic 52683 NM_033087 85365 Hs.40919 NM_033087 ENSG00000119523 ALG2 CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 ALG2 alpha-1,3/1,6-mannosyltransferase protein-coding 187.23 chr10 99593293 99593575 + 1.07692 NA Intergenic Intergenic 27005 NM_031212 81894 Hs.403790 NM_031212 ENSG00000155287 SLC25A28 MFRN2|MRS3/4|MRS4L|NPD016 solute carrier family 25 member 28 protein-coding 209.538-5 chr6 136340842 136341239 + 1.07692 NA Intergenic Intergenic -51189 NM_001077440 9774 Hs.486542 NM_014739 ENSG00000029363 BCLAF1 BTF|bK211L9.1 BCL2 associated transcription factor 1 protein-coding 174.153 chr3 89376303 89376720 + 1.07692 NA intron (NM_182644, intron 5 of 6) intron (NM_182644, intron 5 of 6) 268890 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 179.384 chr4 36067603 36067871 + 1.07692 NA non-coding (NR_146894, exon 33 of 33) non-coding (NR_146894, exon 33 of 33) 176202 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 264.231 chr10 52692294 52692752 + 1.07692 NA intron (NR_155748, intron 1 of 2) AluSp|SINE|Alu 62881 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA 266.692-2 chr10 18882320 18882634 + 1.07692 NA Intergenic Intergenic -166324 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding 175.307 chr6 50085203 50085396 + 1.07692 NA Intergenic Intergenic -35370 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding 155.077-16 chrX 9244881 9245062 + 1.07692 NA Intergenic Intergenic -210844 NM_205849 171483 Hs.733351 NM_173696 ENSG00000177138 FAM9B TEX39B family with sequence similarity 9 member B protein-coding 235.231 chr3 108148697 108149055 + 1.07692 NA Intergenic L1ME4b|LINE|L1 23055 NR_110028 101929623 Hs.570653 NR_110028 ENSG00000271856 LINC01215 - long intergenic non-protein coding RNA 1215 ncRNA 218.615-2 chr14 61736470 61736780 + 1.07692 NA intron (NM_181054, intron 8 of 13) L1PA16|LINE|L1 12464 NR_045406 100750247 Hs.597216 NR_045406 HIF1A-AS2 3'aHIF-1A|aHIF HIF1A antisense RNA 2 ncRNA 210.538 chr18 22119391 22119805 + 1.07692 NA Intergenic L1MA4|LINE|L1 49370 NR_102763 100128893 Hs.514745 NR_102763 ENSG00000266010 GATA6-AS1 BM742401|locus5689 GATA6 antisense RNA 1 (head to head) ncRNA 221.077-2 chr13 64896534 64896904 + 1.07692 NA Intergenic L1MC3|LINE|L1 -820708 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA 261.461 chr20 10537423 10537903 + 1.07692 NA intron (NM_001009608, intron 2 of 7) intron (NM_001009608, intron 2 of 7) 102358 NM_001009608 128710 Hs.668782 NM_001009608 ENSG00000149346 SLX4IP C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3 SLX4 interacting protein protein-coding 238.307 chr5 55152377 55153149 + 1.07692 NA intron (NM_001145734, intron 2 of 10) intron (NM_001145734, intron 2 of 10) -7408 NR_131337 493869 Hs.289044 NM_001008397 ENSG00000164294 GPX8 EPLA847|GPx-8|GSHPx-8|UNQ847 glutathione peroxidase 8 (putative) protein-coding 267.23 chr10 66024525 66024948 + 1.07692 NA intron (NM_001127384, intron 15 of 17) intron (NM_001127384, intron 15 of 17) 453311 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 287.692 chr1 64824962 64825384 + 1.07692 NA intron (NM_001366165, intron 11 of 11) intron (NM_001366165, intron 11 of 11) 80098 NM_018211 55225 Hs.591443 NM_018211 ENSG00000162437 RAVER2 - ribonucleoprotein, PTB binding 2 protein-coding 279.231 chr17 69061362 69061902 + 1.07692 NA promoter-TSS (NM_080283) promoter-TSS (NM_080283) -705 NM_080283 10350 Hs.131686 NM_080283 ENSG00000154258 ABCA9 EST640918 ATP binding cassette subfamily A member 9 protein-coding 178.769-6 chr4 91455626 91455847 + 1.07692 NA intron (NM_001145065, intron 10 of 10) intron (NM_001145065, intron 10 of 10) 821566 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 218.077-4 chr2 39570797 39571158 + 1.07692 NA intron (NR_037875, intron 5 of 5) intron (NR_037875, intron 5 of 5) -94521 NM_001167959 130733 Hs.40808 NM_152390 ENSG00000152154 TMEM178A TMEM178 transmembrane protein 178A protein-coding 216.923-4 chr14 59327010 59327259 + 1.07692 NA intron (NM_001270520, intron 12 of 24) intron (NM_001270520, intron 12 of 24) 63693 NM_014992 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding 163.846-5 chr12 15717934 15718362 + 1.07692 NA intron (NM_004447, intron 1 of 20) MIRc|SINE|MIR 71240 NM_004447 2059 Hs.591160 NM_004447 ENSG00000151491 EPS8 DFNB102 epidermal growth factor receptor pathway substrate 8 protein-coding 183.615-9 chr7 19623652 19623844 + 1.07692 NA Intergenic L1M8|LINE|L1 81688 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA 157.538-7 chr3 5543723 5543967 + 1.07692 NA Intergenic L1MA8|LINE|L1 -293590 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 183.615-7 chr20 23247977 23248250 + 1.07692 NA Intergenic Intergenic -102678 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding 162-12 chr6 132875811 132876044 + 1.07692 NA Intergenic L1MC5|LINE|L1 58708 NR_002436 594839 Hs.671378 NR_002436 ENSG00000200534 SNORA33 ACA33 small nucleolar RNA, H/ACA box 33 snoRNA 197.769-6 chr3 102331943 102332458 + 1.07692 NA Intergenic Intergenic -102815 NM_001329788 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 212.692 chr18 6187950 6188419 + 1.07692 NA intron (NM_001365769, intron 12 of 16) intron (NM_001365769, intron 12 of 16) -68560 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA 158-5 chr15 76955902 76956207 + 1.07692 NA Intergenic Intergenic 24305 NM_002902 5955 Hs.79088 NM_002902 ENSG00000117906 RCN2 E6BP|ERC-55|ERC55|TCBP49 reticulocalbin 2 protein-coding 193.692-3 chr5 21090531 21090741 + 1.07692 NA Intergenic L1MC5|LINE|L1 -368844 NR_027027 728411 Hs.88181 NM_207331 ENSG00000183666 GUSBP1 - GUSB pseudogene 1 pseudo 154.923-13 chr9 83619407 83619797 + 1.07692 NA Intergenic L1MB7|LINE|L1 -3447 NM_001256915 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding 194.462-3 chr2 88120353 88120599 + 1.07692 NA Intergenic Intergenic 7586 NM_001443 2168 Hs.380135 NM_001443 ENSG00000163586 FABP1 FABPL|L-FABP fatty acid binding protein 1 protein-coding 274.461 chr3 159476291 159476693 + 1.07692 NA intron (NM_001197108, intron 1 of 6) intron (NM_001197108, intron 1 of 6) 193846 NR_037483 100500803 NR_037483 ENSG00000263634 MIR3919 - microRNA 3919 ncRNA 165.385-9 chr21 19990996 19991279 + 1.07692 NA Intergenic L1MC3|LINE|L1 -91382 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA 299.846 chr5 85255053 85255594 + 1.07692 NA Intergenic Intergenic -870443 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 174.615-9 chr5 106895418 106895602 + 1.07692 NA intron (NR_104671, intron 2 of 3) MLT2B2|LTR|ERVL 115504 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 154.461-3 chr12 64876286 64876482 + 1.07692 NA 3' UTR (NM_015279, exon 12 of 12) 3' UTR (NM_015279, exon 12 of 12) -7390 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 LINC02389 - long intergenic non-protein coding RNA 2389 ncRNA 224.539 chr18 11069382 11069762 + 1.07692 NA intron (NM_022068, intron 1 of 51) L1M1|LINE|L1 79190 NM_022068 63895 Hs.436902 NM_022068 ENSG00000154864 PIEZO2 C18orf30|C18orf58|DA3|DA5|DAIPT|FAM38B|FAM38B2|HsT748|HsT771|MWKS piezo type mechanosensitive ion channel component 2 protein-coding 197.077-3 chr13 58866888 58867162 + 1.07692 NA Intergenic L1MB2|LINE|L1 -633908 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA 172.307 chr7 11627603 11627812 + 1.07692 NA intron (NM_015204, intron 2 of 26) intron (NM_015204, intron 2 of 26) 204491 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding 176.692 chr11 101902834 101903131 + 1.07692 NA intron (NM_178127, intron 5 of 8) intron (NM_178127, intron 5 of 8) -12028 NM_020802 57562 Hs.156352 NM_020802 ENSG00000110318 CEP126 KIAA1377 centrosomal protein 126 protein-coding 187.384-3 chr15 54427560 54427830 + 1.07692 NA intron (NM_001329919, intron 18 of 31) intron (NM_001329919, intron 18 of 31) 415047 NM_001080534 440279 Hs.657273 NM_001080534 ENSG00000137766 UNC13C - unc-13 homolog C protein-coding 236.923-2 chr2 128580018 128580415 + 1.07692 NA Intergenic Intergenic -261348 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding 173.923-7 chr9 113771972 113772204 + 1.07692 NA Intergenic Intergenic -104194 NM_133374 114991 Hs.349208 NM_133374 ENSG00000157657 ZNF618 FP13169|NEDD10 zinc finger protein 618 protein-coding 269.23 chr2 22405015 22405465 + 1.07692 NA Intergenic Intergenic -131239 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 266.307-2 chr7 88375676 88376025 + 1.07692 NA Intergenic Intergenic -68956 NM_001205315 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding 160.462-2 chr1 182303664 182303918 + 1.07692 NA intron (NR_104175, intron 2 of 2) intron (NR_104175, intron 2 of 2) 10270 NR_104175 400799 Hs.634884 NR_104175 ENSG00000228918 LINC01344 GS1-122H1.2 long intergenic non-protein coding RNA 1344 ncRNA 183.615 chr1 57196337 57196540 + 1.07692 NA intron (NM_001353980, intron 5 of 5) intron (NM_001353980, intron 5 of 5) 226674 NM_001365793 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 255.23 chr14 47077575 47077875 + 1.07692 NA intron (NM_001113498, intron 6 of 16) L4_A_Mam|LINE|RTE-X 265521 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 156.923-5 chr15 72891704 72891988 + 1.07692 NA Intergenic L1MC4|LINE|L1 -108088 NM_001365228 83440 Hs.562587 NM_031284 ENSG00000159322 ADPGK 2610017G09Rik|ADP-GK ADP dependent glucokinase protein-coding 176-4 chr4 163750810 163751021 + 1.07692 NA intron (NM_001166373, intron 3 of 7) L1MEd|LINE|L1 -137381 NM_017923 55016 Hs.592804 NM_017923 ENSG00000145416 MARCH1 MARCH-I|RNF171 membrane associated ring-CH-type finger 1 protein-coding 213.615 chr15 88301412 88301946 + 1.07692 NA Intergenic Intergenic -44940 NM_002530 4916 Hs.185701 NM_002530 ENSG00000140538 NTRK3 GP145-TrkC|TRKC|gp145(trkC) neurotrophic receptor tyrosine kinase 3 protein-coding 204.769 chr17 71395482 71395730 + 1.07692 NA Intergenic AluJb|SINE|Alu -193427 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 152.384 chr19 30288722 30288922 + 1.07692 NA Intergenic Intergenic -83562 NM_001352260 9745 Hs.378901 NM_014717 ENSG00000198597 ZNF536 - zinc finger protein 536 protein-coding 187.769-4 chr6 126526428 126526801 + 1.07692 NA Intergenic Intergenic 41983 NR_030316 693173 NR_030316 ENSG00000207632 MIR588 MIRN588|hsa-mir-588 microRNA 588 ncRNA 202.307 chr17 51552553 51552857 + 1.07692 NA Intergenic MER33|DNA|hAT-Charlie 117278 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA 203.23 chr2 74776589 74776792 + 1.07692 NA Intergenic Intergenic -55965 NM_000189 3099 Hs.406266 NM_000189 ENSG00000159399 HK2 HKII|HXK2 hexokinase 2 protein-coding 166.615-4 chr14 87380413 87380873 + 1.07692 NA Intergenic Intergenic 274651 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA 218.307 chr1 75286767 75287017 + 1.07692 NA intron (NM_001320283, intron 3 of 21) L1PB1|LINE|L1 152504 NM_001256114 431707 Hs.403934 NM_001001933 ENSG00000162624 LHX8 LHX7 LIM homeobox 8 protein-coding 180.384-2 chr3 187527012 187527259 + 1.07692 NA Intergenic Intergenic 80089 NR_146716 105374261 Hs.535726 NR_146716 LINC02041 - long intergenic non-protein coding RNA 2041 ncRNA 198.769 chr4 88069678 88069877 + 1.07692 NA intron (NR_156488, intron 12 of 13) L1M4b|LINE|L1 62142 NM_000297 5311 Hs.181272 NM_000297 ENSG00000118762 PKD2 APKD2|PC2|PKD4|Pc-2|TRPP2 polycystin 2, transient receptor potential cation channel protein-coding 166.923-7 chr7 11263567 11263758 + 1.07692 NA Intergenic Intergenic 289790 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding 189.384 chr6 45388141 45388477 + 1.07692 NA intron (NM_001015051, intron 2 of 7) intron (NM_001015051, intron 2 of 7) -10375 NM_001261823 8464 Hs.368325 NM_003599 ENSG00000196284 SUPT3H SPT3|SPT3L SPT3 homolog, SAGA and STAGA complex component protein-coding 154.385-4 chr17 41828199 41828417 + 1.07692 NA intron (NR_033465, intron 6 of 7) intron (NR_033465, intron 6 of 7) -7377 NM_001329595 317719 Hs.127510 NM_152467 ENSG00000161594 KLHL10 SPGF11 kelch like family member 10 protein-coding 247.692-2 chr7 136647168 136647467 + 1.07692 NA Intergenic L2b|LINE|L2 -221335 NM_001006627 1129 Hs.535891 NM_000739 ENSG00000181072 CHRM2 HM2 cholinergic receptor muscarinic 2 protein-coding 202.308 chr13 85933378 85933698 + 1.07692 NA Intergenic L1PA13|LINE|L1 -134119 NM_032229 84189 Hs.525105 NM_032229 ENSG00000184564 SLITRK6 DFNMYP SLIT and NTRK like family member 6 protein-coding 212.615-3 chr8 106774150 106774518 + 1.07692 NA Intergenic L1MA10|LINE|L1 -4090 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding 198.384 chr10 121065649 121065955 + 1.07692 NA Intergenic L1MB7|LINE|L1 214440 NM_018117 55717 Hs.144447 NM_018117 ENSG00000120008 WDR11 BRWD2|DR11|HH14|SRI1|WDR15 WD repeat domain 11 protein-coding 318.307 chr3 8508258 8508684 + 1.07692 NA intron (NM_001278233, intron 1 of 4) intron (NM_001278233, intron 1 of 4) 6648 NM_001278233 29995 Hs.475353 NM_014583 ENSG00000071282 LMCD1 - LIM and cysteine rich domains 1 protein-coding 195.076 chr14 87506762 87507060 + 1.07692 NA Intergenic L2|LINE|L2 148383 NR_146551 105370611 Hs.691123 NR_146551 ENSG00000258770 LINC02330 - long intergenic non-protein coding RNA 2330 ncRNA 203.538-5 chr6 135242524 135242843 + 1.07692 NA Intergenic L1ME4c|LINE|L1 3523 NR_030317 693126 NR_030317 ENSG00000207689 MIR548A2 MIRN548A2 microRNA 548a-2 ncRNA 238.153 chr15 94263077 94263360 + 1.07692 NA Intergenic Intergenic -34983 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding 155.846-4 chr12 59089990 59090222 + 1.07692 NA Intergenic (ATTC)n|Simple_repeat|Simple_repeat -169568 NM_153377 121227 Hs.253736 NM_153377 ENSG00000139263 LRIG3 LIG3 leucine rich repeats and immunoglobulin like domains 3 protein-coding 154.923-10 chr4 32280232 32280432 + 1.07692 NA Intergenic Intergenic -70706 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 214.077-2 chr2 115697352 115697701 + 1.07692 NA intron (NM_001321912, intron 8 of 25) L1M4c|LINE|L1 353711 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 223.538 chr1 225840796 225841241 + 1.07692 NA intron (NM_001136018, intron 6 of 8) intron (NM_001136018, intron 6 of 8) 15664 NM_000120 2052 Hs.89649 NM_000120 ENSG00000143819 EPHX1 EPHX|EPOX|HYL1|MEH epoxide hydrolase 1 protein-coding 192.308-7 chr8 117431249 117431512 + 1 NA Intergenic Intergenic -89333 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 270.231 chr14 32763852 32764232 + 1 NA intron (NM_004274, intron 11 of 13) intron (NM_004274, intron 11 of 13) -174837 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 160.462-4 chr18 60486855 60487086 + 1 NA Intergenic Intergenic -114195 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding 289.154-2 chr9 27495427 27495902 + 1 NA intron (NM_024761, intron 1 of 3) intron (NM_024761, intron 1 of 3) -28650 NM_020124 56832 Hs.591083 NM_020124 ENSG00000147896 IFNK IFNT1|INFE1 interferon kappa protein-coding 169.846-4 chr17 25920116 25920314 + 1 NA Intergenic ALR/Alpha|Satellite|centr 1169026 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 173.769-4 chr3 50999473 50999817 + 1 NA intron (NM_004947, intron 5 of 52) L2|LINE|L2 324565 NR_039950 100616138 NR_039950 ENSG00000272543 MIR4787 mir-4787 microRNA 4787 ncRNA 169.462-3 chr17 78886528 78886850 + 1 NA intron (NM_003255, intron 1 of 4) intron (NM_003255, intron 1 of 4) 16512 NM_001243540 100653515 Hs.734636 NM_001243540 ENSG00000178404 CEP295NL DDC8|KIAA1731NL CEP295 N-terminal like protein-coding 201.846-4 chr12 8959691 8960010 + 1 NA intron (NR_137427, intron 1 of 2) L1ME2|LINE|L1 9806 NR_137426 10219 Hs.558446 NM_005810 ENSG00000139187 KLRG1 2F1|CLEC15A|MAFA|MAFA-2F1|MAFA-L|MAFA-LIKE killer cell lectin like receptor G1 protein-coding 160.385-5 chr3 21853121 21853366 + 1 NA Intergenic Intergenic -102033 NM_024697 79750 Hs.21026 NM_024697 ENSG00000151789 ZNF385D ZNF659 zinc finger protein 385D protein-coding 155.461 chr18 8713157 8713389 + 1 NA Intergenic Intergenic -4108 NM_015210 23255 Hs.707920 NM_015210 ENSG00000168502 MTCL1 CCDC165|KIAA0802|SOGA2 microtubule crosslinking factor 1 protein-coding 159.385-2 chr16 82698880 82699135 + 1 NA intron (NM_001220488, intron 2 of 14) MER58C|DNA|hAT-Charlie 10076 NR_107025 102465863 NR_107025 ENSG00000277387 MIR8058 hsa-mir-8058 microRNA 8058 ncRNA 153.077-7 chr6 26662530 26662768 + 1 NA Intergenic Intergenic -2897 NM_001242798 79692 Hs.126280 NM_024639 ENSG00000181315 ZNF322 HCG12|ZNF322A|ZNF388|ZNF489 zinc finger protein 322 protein-coding 292.461 chr10 52132834 52133463 + 1 NA intron (NM_001098512, intron 7 of 17) intron (NM_001098512, intron 7 of 17) 180980 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA 227.385-2 chr6 55758313 55758673 + 1 NA intron (NM_001329756, intron 4 of 4) intron (NM_001329756, intron 4 of 4) 117097 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding 186.923-6 chr2 184418787 184419048 + 1 NA Intergenic L1PB3|LINE|L1 39942 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA 219.538-2 chr4 37515858 37516419 + 1 NA intron (NM_001104629, intron 1 of 3) intron (NM_001104629, intron 1 of 3) 62213 NM_001104629 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding 254.538 chr10 85151142 85151575 + 1 NA Intergenic MIRc|SINE|MIR 47547 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 154.462 chr4 71928814 71929143 + 1 NA Intergenic Intergenic -102826 NM_004885 10886 Hs.99231 NM_004885 ENSG00000056291 NPFFR2 GPR74|HLWAR77|NPFF2|NPGPR neuropeptide FF receptor 2 protein-coding 189.385-4 chr8 33101558 33101818 + 1 NA Intergenic MLT1L|LTR|ERVL-MaLR 371458 NM_032664 84750 Hs.458713 NM_032664 ENSG00000172728 FUT10 FUCTX fucosyltransferase 10 protein-coding 199.923-4 chr6 130775045 130775244 + 1 NA Intergenic Intergenic -52261 NM_001195597 100507203 Hs.388715 NM_001195597 ENSG00000256162 SMLR1 - small leucine rich protein 1 protein-coding 170.539-3 chr5 25277918 25278164 + 1 NA intron (NR_136209, intron 1 of 3) (AT)n|Simple_repeat|Simple_repeat 87088 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 213.385 chr11 82007127 82007432 + 1 NA intron (NR_120571, intron 6 of 7) intron (NR_120571, intron 6 of 7) -116443 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 212.308 chr10 14430888 14431146 + 1 NA Intergenic L1MA4|LINE|L1 -5559 NR_031668 100302116 NR_031668 ENSG00000221371 MIR1265 MIRN1265|hsa-mir-1265 microRNA 1265 ncRNA 308.769 chr6 17459541 17460083 + 1 NA intron (NM_001363534, intron 3 of 11) HAL1b|LINE|L1 51453 NR_110855 101928491 Hs.622876 NR_110855 LOC101928491 - uncharacterized LOC101928491 ncRNA 187.385-6 chr9 99932822 99933081 + 1 NA intron (NM_017919, intron 3 of 7) L1M5|LINE|L1 26297 NM_017919 55014 Hs.704031 NM_017919 ENSG00000136874 STX17 - syntaxin 17 protein-coding 289.154 chr3 18458552 18459127 + 1 NA intron (NR_125803, intron 1 of 6) intron (NR_125803, intron 1 of 6) -13247 NM_001322874 6304 Hs.517717 NM_002971 ENSG00000182568 SATB1 - SATB homeobox 1 protein-coding 188.308-6 chr6 21829264 21829767 + 1 NA intron (NR_015410, intron 4 of 11) intron (NR_015410, intron 4 of 11) 163102 NR_015410 401237 Hs.712707 NR_015410 CASC15 CANT|LINC00340|lnc-SOX4-1 cancer susceptibility 15 ncRNA 167.385 chr10 50527618 50527808 + 1 NA intron (NM_147156, intron 2 of 10) intron (NM_147156, intron 2 of 10) 96243 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 227.846 chr20 9361405 9361670 + 1 NA intron (NM_000933, intron 4 of 35) L1MB3|LINE|L1 53737 NM_000933 5332 Hs.472101 NM_000933 ENSG00000101333 PLCB4 ARCND2|PI-PLC phospholipase C beta 4 protein-coding 246.231-3 chr9 34896104 34896442 + 1 NA promoter-TSS (NM_001309426) promoter-TSS (NM_001309426) -509 NM_001309427 100129969 Hs.571602 NM_001309426 ENSG00000187791 FAM205C FAM205CP family with sequence similarity 205 member C protein-coding 170.385-5 chr3 179625024 179625265 + 1 NA TTS (NM_001199958) TTS (NM_001199958) 20350 NM_002492 4711 Hs.730674 NM_002492 ENSG00000136521 NDUFB5 CISGDH|SGDH NADH:ubiquinone oxidoreductase subunit B5 protein-coding 173.538 chr1 192296736 192296909 + 1 NA Intergenic Intergenic -20170 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding 215.231-6 chr9 79650516 79650806 + 1 NA intron (NM_001351541, intron 7 of 20) intron (NM_001351541, intron 7 of 20) 77484 NM_001351546 7091 Hs.444213 NM_007005 ENSG00000106829 TLE4 BCE-1|BCE1|E(spI)|E(spl)|ESG|ESG4|GRG4|Grg-4 TLE family member 4, transcriptional corepressor protein-coding 187.538 chr10 50468077 50468309 + 1 NA intron (NM_147156, intron 3 of 10) MIRb|SINE|MIR 155763 NM_147156 259230 Hs.654698 NM_147156 ENSG00000198964 SGMS1 MOB|MOB1|SMS1|TMEM23|hmob33 sphingomyelin synthase 1 protein-coding 183.308-4 chr4 54112419 54112823 + 1 NA Intergenic LTR47B4|LTR|ERVL 12458 NM_133267 170825 Hs.371899 NM_133267 ENSG00000180613 GSX2 GSH2 GS homeobox 2 protein-coding 194.846 chr2 24254190 24254550 + 1 NA exon (NM_001348186, exon 23 of 29) exon (NM_001348186, exon 23 of 29) 79317 NM_001040710 653140 Hs.741736 NM_001040710 ENSG00000186453 FAM228A C2orf84 family with sequence similarity 228 member A protein-coding 216.154 chr2 76425570 76425902 + 1 NA Intergenic THE1C|LTR|ERVL-MaLR -560229 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 152.923-3 chr10 72842057 72842264 + 1 NA intron (NM_138357, intron 2 of 7) AluSx3|SINE|Alu -51579 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding 224.154-2 chr4 54019689 54020132 + 1 NA intron (NM_012110, intron 3 of 5) intron (NM_012110, intron 3 of 5) -32628 NR_027153 402176 Hs.452943 NM_001011538 RPL21P44 RPL21_17_477 ribosomal protein L21 pseudogene 44 pseudo 185.231 chr1 229772786 229772977 + 1 NA Intergenic Intergenic 112937 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA 178.154-4 chr2 218482282 218482592 + 1 NA intron (NM_020935, intron 16 of 25) intron (NM_020935, intron 16 of 25) 63314 NM_007127 7429 Hs.654595 NM_007127 ENSG00000127831 VIL1 D2S1471|VIL villin 1 protein-coding 159.538-6 chr2 29164014 29164419 + 1 NA intron (NM_001287528, intron 13 of 14) intron (NM_001287528, intron 13 of 14) 48801 NM_024692 79745 Hs.122927 NM_024692 ENSG00000115295 CLIP4 RSNL2 CAP-Gly domain containing linker protein family member 4 protein-coding 169.692-3 chr10 63653814 63654186 + 1 NA Intergenic Intergenic -132110 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 183.539 chr10 32937763 32938030 + 1 NA intron (NM_002211, intron 1 of 15) intron (NM_002211, intron 1 of 15) -2338 NM_033668 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding 203.538 chr10 106763234 106763676 + 1 NA intron (NM_001206569, intron 4 of 25) intron (NM_001206569, intron 4 of 25) 401251 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding 162.385-2 chr14 49610889 49611161 + 1 NA intron (NM_152329, intron 3 of 3) intron (NM_152329, intron 3 of 3) 9601 NM_001001 6166 Hs.444749 NM_001001 ENSG00000165502 RPL36AL RPL36A ribosomal protein L36a like protein-coding 184.231-2 chr2 43479248 43479560 + 1 NA intron (NM_001083953, intron 26 of 37) MIR3|SINE|MIR 116570 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding 178.462-6 chr9 36372516 36372732 + 1 NA intron (NM_194328, intron 3 of 11) intron (NM_194328, intron 3 of 11) 27645 NM_022781 152006 Hs.333503 NM_022781 ENSG00000137075 RNF38 - ring finger protein 38 protein-coding 168.385 chr10 55287861 55288104 + 1 NA intron (NM_001354404, intron 2 of 34) intron (NM_001354404, intron 2 of 34) -311060 NM_001190478 100463289 NM_001190478 ENSG00000249860 MTRNR2L5 HN5 MT-RNR2 like 5 protein-coding 287.461-2 chr6 162828607 162828978 + 1 NA intron (NM_001080379, intron 2 of 4) intron (NM_001080379, intron 2 of 4) 100822 NM_001080379 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding 197.769-4 chr15 59094873 59095218 + 1 NA 3' UTR (NM_001330331, exon 14 of 14) 3' UTR (NM_001330331, exon 14 of 14) -10101 NM_004701 9133 Hs.194698 NM_004701 ENSG00000157456 CCNB2 HsT17299 cyclin B2 protein-coding 173.461-3 chr5 14827445 14827823 + 1 NA intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) -1622 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA 191.308 chr12 23946991 23947230 + 1 NA intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) 2560 NM_001330785 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 196.923-3 chr5 26038880 26039291 + 1 NA Intergenic Intergenic 848132 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 219.077 chr6 69334702 69334946 + 1 NA intron (NM_001704, intron 24 of 31) MIRb|SINE|MIR 461642 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding 199.769-5 chr2 63103765 63104123 + 1 NA Intergenic L1MA4A|LINE|L1 15598 NR_036635 100169989 Hs.606147 NR_036635 ENSG00000242412 DBIL5P2 ELP1P diazepam binding inhibitor-like 5 pseudogene 2 pseudo 171.308-3 chr20 54441818 54442036 + 1 NA Intergenic LTR37A|LTR|ERV1 -33666 NM_018431 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 171.154 chr11 106719389 106719602 + 1 NA intron (NM_000855, intron 6 of 7) intron (NM_000855, intron 6 of 7) 298981 NM_000855 2977 Hs.24321 NM_000855 ENSG00000152402 GUCY1A2 GC-SA2|GUC1A2 guanylate cyclase 1 soluble subunit alpha 2 protein-coding 163.154-4 chr6 120126831 120127003 + 1 NA Intergenic Intergenic 111738 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA 165.769-4 chr14 32919196 32919433 + 1 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -19565 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 190.385-3 chr5 90119859 90120174 + 1 NA Intergenic Intergenic -103296 NR_037433 100500825 NR_037433 ENSG00000264342 MIR3660 mir-3660 microRNA 3660 ncRNA 163.846-7 chr2 38360852 38361065 + 1 NA intron (NM_001330462, intron 1 of 13) L1ME3Cz|LINE|L1 15572 NM_001330459 64225 Hs.594950 NM_022374 ENSG00000119787 ATL2 ARL3IP2|ARL6IP2|aip-2|atlastin2 atlastin GTPase 2 protein-coding 164.538-9 chr7 64841096 64841336 + 1 NA intron (NR_160269, intron 2 of 3) intron (NR_160269, intron 2 of 3) 46788 NM_001271649 7697 Hs.184080 NM_006524 ENSG00000197008 ZNF138 pHZ-32 zinc finger protein 138 protein-coding 156.538-4 chr3 59807385 59807579 + 1 NA intron (NM_001354590, intron 7 of 8) MIR3|SINE|MIR -148985 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 157.077-3 chr14 41295212 41295437 + 1 NA Intergenic Intergenic -311532 NM_152447 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 155.846 chr1 80652515 80652849 + 1 NA Intergenic X8_LINE|LINE|CR1 11395 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 205.077 chr2 193135600 193135827 + 1 NA Intergenic Intergenic 385868 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA 168.692 chr10 5066730 5066940 + 1 NA intron (NM_001253908, intron 1 of 8) MER51-int|LTR|ERV1 18069 NM_001253908 8644 Hs.78183 NM_003739 ENSG00000196139 AKR1C3 DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS aldo-keto reductase family 1 member C3 protein-coding 167.538 chr1 189374593 189374868 + 1 NA Intergenic Intergenic 1101280 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 230.846 chr3 110706678 110707109 + 1 NA Intergenic L1MA3|LINE|L1 363066 NR_045114 100506555 Hs.535689 NR_045114 NECTIN3-AS1 PVRL3-AS1 NECTIN3 antisense RNA 1 ncRNA 234.615 chr4 30281533 30281864 + 1 NA Intergenic Intergenic -438671 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 157.462 chr18 69101875 69102128 + 1 NA Intergenic L2b|LINE|L2 -298887 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding 159.923-10 chr9 30976052 30976211 + 1 NA Intergenic L1MD1|LINE|L1 405359 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 355.692 chr8 140511078 140511804 + 1 NA promoter-TSS (NR_040712) promoter-TSS (NR_040712) 119 NM_017444 54108 Hs.279704 NM_017444 ENSG00000104472 CHRAC1 CHARC1|CHARC15|CHRAC-1|CHRAC-15|CHRAC15|YCL1 chromatin accessibility complex subunit 1 protein-coding 222.615-2 chr3 57189580 57189955 + 1 NA Intergenic L1ME1|LINE|L1 10211 NM_003865 8820 Hs.171980 NM_003865 ENSG00000163666 HESX1 ANF|CPHD5|RPX HESX homeobox 1 protein-coding 257.769-2 chr9 80261702 80262058 + 1 NA Intergenic L1MA9|LINE|L1 286857 NR_121212 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA 177.846-4 chr6 53051642 53052131 + 1 NA intron (NM_014920, intron 1 of 13) intron (NM_014920, intron 1 of 13) 9916 NM_016513 22858 Hs.417022 NM_014920 ENSG00000112144 ICK ECO|EJM10|LCK2|MRK intestinal cell kinase protein-coding 183.615-2 chr1 80041292 80041678 + 1 NA Intergenic Intergenic -494270 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 182.231-4 chr3 154337279 154337643 + 1 NA 3' UTR (NM_001038705, exon 4 of 4) 3' UTR (NM_001038705, exon 4 of 4) -12964 NM_001114397 170506 Hs.446270 NM_020865 ENSG00000174953 DHX36 DDX36|G4R1|MLEL1|RHAU DEAH-box helicase 36 protein-coding 182.154 chr1 189661721 189662096 + 1 NA Intergenic Intergenic 814102 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 217.615 chr14 80073798 80074259 + 1 NA Intergenic L1MC5a|LINE|L1 -137391 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA 200.385-3 chr3 157457074 157457306 + 1 NA intron (NM_024621, intron 4 of 13) L1PA13|LINE|L1 20340 NM_002852 5806 Hs.591286 NM_002852 ENSG00000163661 PTX3 TNFAIP5|TSG-14 pentraxin 3 protein-coding 189.692-5 chr8 88274038 88274323 + 1 NA intron (NM_005941, intron 1 of 9) L2|LINE|L2 53303 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 241.077 chr3 53097186 53097734 + 1 NA intron (NM_052859, intron 11 of 12) intron (NM_052859, intron 11 of 12) 32975 NM_052859 91869 Hs.631910 NM_052859 ENSG00000163933 RFT1 CDG1N RFT1 homolog protein-coding 212.769-3 chr3 109986544 109986940 + 1 NA Intergenic Intergenic 383914 NR_039647 100616129 NR_039647 ENSG00000265956 MIR4445 - microRNA 4445 ncRNA 204.385 chr12 32697383 32698042 + 1 NA intron (NM_001330380, intron 1 of 18) intron (NM_001330380, intron 1 of 18) 18411 NM_012062 10059 Hs.556296 NM_005690 ENSG00000087470 DNM1L DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV|OPA5 dynamin 1 like protein-coding 153.154-5 chr5 87842771 87843155 + 1 NA Intergenic Intergenic 180921 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA 212.923-5 chrX 108030180 108030471 + 1 NA Intergenic Intergenic -14645 NM_001170553 340547 Hs.177164 NM_182607 ENSG00000101842 VSIG1 1700062D20Rik|GPA34|dJ889N15.1 V-set and immunoglobulin domain containing 1 protein-coding 171.769-3 chr3 156261375 156261591 + 1 NA intron (NM_003471, intron 1 of 13) L1ME1|LINE|L1 -29504 NM_172159 7881 Hs.654519 NM_003471 ENSG00000169282 KCNAB1 AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 protein-coding 203.308-4 chr9 108373569 108373809 + 1 NA Intergenic L1PB1|LINE|L1 482297 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding 241.769 chr10 94640834 94641304 + 1 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -42660 NM_000772 1562 Hs.511872 NM_000772 ENSG00000108242 CYP2C18 CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 cytochrome P450 family 2 subfamily C member 18 protein-coding 175.769-6 chr22 47257712 47257946 + 1 NA Intergenic Intergenic -87742 NR_144462 339685 Hs.434351 NR_038922 ENSG00000224715 LOC339685 - uncharacterized LOC339685 ncRNA 266.692 chr1 49272723 49273145 + 1 NA intron (NR_136623, intron 2 of 12) LTR49-int|LTR|ERV1 15523 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA 168.077 chr14 72977866 72978197 + 1 NA exon (NM_021260, exon 8 of 12) exon (NM_021260, exon 8 of 12) 8925 NM_178441 53349 Hs.335106 NM_021260 ENSG00000165861 ZFYVE1 DFCP1|PPP1R172|SR3|TAFF1|ZNFN2A1 zinc finger FYVE-type containing 1 protein-coding 155.615-7 chr6 139131991 139132363 + 1 NA Intergenic Intergenic -2903 NM_016217 51696 Hs.197644 NM_016217 ENSG00000112406 HECA HDC|HDCL|HHDC|dJ225E12.1 hdc homolog, cell cycle regulator protein-coding 220.462-2 chr5 43536289 43536746 + 1 NA intron (NM_006451, intron 6 of 10) intron (NM_006451, intron 6 of 10) 20560 NM_006451 10605 Hs.482038 NM_006451 ENSG00000172239 PAIP1 - poly(A) binding protein interacting protein 1 protein-coding 159.462-3 chr3 180615611 180615902 + 1 NA intron (NM_181426, intron 19 of 19) intron (NM_181426, intron 19 of 19) 13593 NM_001288582 151613 Hs.43213 NM_133462 ENSG00000163728 TTC14 DRDL5813|PRO19630 tetratricopeptide repeat domain 14 protein-coding 229.385 chr13 84737924 84738419 + 1 NA Intergenic ERVL-E-int|LTR|ERVL -45483 NR_132852 106635542 NR_132852 SNORA107 - small nucleolar RNA, H/ACA box 107 snoRNA 264.154 chr18 13153316 13153717 + 1 NA Intergenic L1MA4|LINE|L1 -65244 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 197.154 chr1 73840930 73841292 + 1 NA Intergenic L1MA9|LINE|L1 166432 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA 180.692-8 chr2 120178959 120179184 + 1 NA TTS (NM_020909) TTS (NM_020909) 44329 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding 259.308 chr4 61396452 61396786 + 1 NA intron (NM_001371343, intron 2 of 23) intron (NM_001371343, intron 2 of 23) 194447 NM_001371342 162.077-4 chr14 54614109 54614386 + 1 NA intron (NM_015589, intron 1 of 11) Charlie1a|DNA|hAT-Charlie 46635 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding 171.077-7 chr2 161272601 161272853 + 1 NA Intergenic Tigger15a|DNA|TcMar-Tigger -18084 NR_110593 101929512 Hs.666488 NR_110593 LOC101929512 - uncharacterized LOC101929512 ncRNA 211.923-4 chr8 99816432 99816817 + 1 NA intron (NM_017890, intron 44 of 61) AluJb|SINE|Alu 77083 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding 188.923-3 chr5 96072985 96073346 + 1 NA intron (NR_130776, intron 1 of 4) intron (NR_130776, intron 1 of 4) -5973 NR_030309 693168 NR_030309 ENSG00000207578 MIR583 MIRN583|hsa-mir-583 microRNA 583 ncRNA 178.846 chr15 61556248 61556472 + 1 NA Intergenic L2c|LINE|L2 -173558 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA 197.769 chr12 46241753 46241983 + 1 NA intron (NM_001278388, intron 1 of 15) intron (NM_001278388, intron 1 of 15) 24648 NM_001278389 81539 Hs.533770 NM_030674 ENSG00000111371 SLC38A1 ATA1|NAT2|SAT1|SNAT1 solute carrier family 38 member 1 protein-coding 188.462-2 chr10 112331788 112332181 + 1 NA intron (NR_028134, intron 10 of 18) MER33|DNA|hAT-Charlie 24611 NR_028134 390003 Hs.534691 NR_028134 ENSG00000243316 GUCY2GP GUCY2G guanylate cyclase 2G, pseudogene pseudo 242.846 chr1 81849453 81849892 + 1 NA intron (NM_001366002, intron 3 of 20) intron (NM_001366002, intron 3 of 20) 47219 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding 214.769 chr6 154574199 154574452 + 1 NA Intergenic Intergenic -63640 NM_173515 154043 Hs.16064 NM_173515 ENSG00000153721 CNKSR3 CNK3|CNK3/IPCEF1|MAGI1 CNKSR family member 3 protein-coding 179.077-6 chr2 129187061 129187314 + 1 NA Intergenic Intergenic 86704 NR_122040 151121 Hs.531687 NM_001033657 ENSG00000204460 LINC01854 - long intergenic non-protein coding RNA 1854 ncRNA 187.308 chr10 127449218 127449589 + 1 NA intron (NM_001290223, intron 51 of 51) intron (NM_001290223, intron 51 of 51) -99946 NM_001030013 594857 Hs.643423 NM_001030013 ENSG00000214285 NPS - neuropeptide S protein-coding 193.231-5 chr4 32166821 32167142 + 1 NA Intergenic Intergenic -144559 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA 164.923-6 chr3 54131002 54131260 + 1 NA intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 8579 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding 234.231 chr2 64148240 64148562 + 1 NA Intergenic AluJb|SINE|Alu -3981 NM_020651 57162 Hs.7886 NM_020651 ENSG00000197329 PELI1 - pellino E3 ubiquitin protein ligase 1 protein-coding 171.077-4 chr14 32096494 32096832 + 1 NA intron (NM_001173, intron 2 of 6) L1MD|LINE|L1 19359 NM_001173 394 Hs.592313 NM_001173 ENSG00000100852 ARHGAP5 GFI2|RhoGAP5|p190-B|p190BRhoGAP Rho GTPase activating protein 5 protein-coding 253.385 chr22 46177996 46178434 + 1 NA intron (NM_001362872, intron 3 of 8) intron (NM_001362872, intron 3 of 8) 27420 NM_001362873 5465 Hs.103110 NM_005036 ENSG00000186951 PPARA NR1C1|PPAR|PPARalpha|hPPAR peroxisome proliferator activated receptor alpha protein-coding 199.923-5 chr9 24285923 24286353 + 1 NA Intergenic L1ME3A|LINE|L1 259538 NM_001271706 100129669 Hs.573530 NM_001271706 ENSG00000205442 IZUMO3 C9orf134|bA20A20.1 IZUMO family member 3 protein-coding 242.385 chr12 40027334 40027782 + 1 NA intron (NM_052885, intron 3 of 9) intron (NM_052885, intron 3 of 9) 78523 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding 162.077-2 chr10 75695691 75695980 + 1 NA intron (NR_131178, intron 1 of 7) intron (NR_131178, intron 1 of 7) -16620 NR_132791 105378367 Hs.464836 NR_132791 LOC105378367 - uncharacterized LOC105378367 ncRNA 197.154-4 chr9 119425178 119425679 + 1 NA Intergenic L1MB8|LINE|L1 -55993 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding 199.385 chr13 51248246 51248501 + 1 NA intron (NM_145019, intron 3 of 4) intron (NM_145019, intron 3 of 4) 25975 NM_145019 220108 Hs.71913 NM_145019 ENSG00000150510 FAM124A - family with sequence similarity 124 member A protein-coding 240.231-2 chr7 115042070 115042320 + 1 NA Intergenic Intergenic -36763 NR_120521 102724386 Hs.352357 NR_120521 ENSG00000225535 LINC01393 - long intergenic non-protein coding RNA 1393 ncRNA 318.231 chr8 137317884 137318303 + 1 NA Intergenic L1MDa|LINE|L1 95495 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 165.923 chr10 46003495 46003683 + 1 NA non-coding (NR_073029, exon 8 of 8) non-coding (NR_073029, exon 8 of 8) 15948 NM_001145262 8031 Hs.643658 NM_005437 ENSG00000266412 NCOA4 ARA70|ELE1|PTC3|RFG nuclear receptor coactivator 4 protein-coding 230.769 chr1 216880978 216881347 + 1 NA intron (NM_001243507, intron 2 of 7) intron (NM_001243507, intron 2 of 7) 58511 NM_001243512 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding 211.769 chr5 125785821 125786271 + 1 NA Intergenic L1MC2|LINE|L1 292785 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA 158.538-2 chr10 31937057 31937245 + 1 NA Intergenic MER101-int|LTR|ERV1 -8275 NM_001270697 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 237.461 chr11 37296584 37297292 + 1 NA Intergenic Intergenic -641663 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA 220.308 chr10 44531770 44532182 + 1 NA Intergenic L1MB5|LINE|L1 -146879 NM_199168 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 234.154 chr11 14753009 14753399 + 1 NA intron (NM_000922, intron 1 of 15) intron (NM_000922, intron 1 of 15) 109400 NM_000922 5140 Hs.445711 NM_000922 ENSG00000152270 PDE3B HcGIP1|cGIPDE1 phosphodiesterase 3B protein-coding 172.308-4 chr4 77966290 77966558 + 1 NA Intergenic Intergenic -90899 NM_025074 80144 Hs.369448 NM_020875 ENSG00000138759 FRAS1 FRASRS1 Fraser extracellular matrix complex subunit 1 protein-coding 172.846-4 chr8 81161776 81162094 + 1 NA Intergenic L2a|LINE|L2 -49867 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding 245.154 chr7 79793859 79794221 + 1 NA Intergenic L1MC4|LINE|L1 340080 NR_038344 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA 199.154-4 chr4 86735556 86735818 + 1 NA exon (NM_006264, exon 15 of 47) exon (NM_006264, exon 15 of 47) 113697 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding 237.462 chr3 79588329 79588876 + 1 NA intron (NM_002941, intron 2 of 30) intron (NM_002941, intron 2 of 30) 80715 NR_037488 100500877 NR_037488 ENSG00000265193 MIR3923 - microRNA 3923 ncRNA 291.462 chr10 110967071 110967538 + 1 NA intron (NM_001269039, intron 2 of 7) MIRb|SINE|MIR -21622 NR_031614 100313921 NR_031614 ENSG00000221214 MIR548E MIRN548E|hsa-mir-548e microRNA 548e ncRNA 164.846-5 chr4 45559485 45559759 + 1 NA Intergenic Intergenic 564432 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding 165.308-5 chr4 34414450 34414871 + 1 NA Intergenic Intergenic -144913 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 202.923-2 chr16 22812958 22813219 + 1 NA Intergenic Intergenic -1074 NM_006043 9956 Hs.115830 NM_006043 ENSG00000122254 HS3ST2 30ST2|3OST2 heparan sulfate-glucosamine 3-sulfotransferase 2 protein-coding 159.154-6 chr8 47443040 47443266 + 1 NA intron (NM_001080394, intron 8 of 19) intron (NM_001080394, intron 8 of 19) 182215 NM_001080394 23514 Hs.381058 NM_001080394 ENSG00000164808 SPIDR KIAA0146 scaffold protein involved in DNA repair protein-coding 236.154 chr11 29570267 29570843 + 1 NA Intergenic MSTA-int|LTR|ERVL-MaLR -23858 NR_149107 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA 198.154 chr16 11948084 11948324 + 1 NA intron (NM_001355514, intron 3 of 8) MER81|DNA|hAT-Blackjack 16234 NM_001355514 729978 Hs.730028 NM_001355514 ENSG00000234719 NPIPB2 - nuclear pore complex interacting protein family, member B2 protein-coding 306.308 chr14 20000386 20001009 + 1 NA Intergenic Intergenic -1365 NR_145508 390432 NM_001348271 ENSG00000196383 OR4Q2 OR4Q2P olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene) protein-coding 156.462-5 chr3 39085857 39086036 + 1 NA intron (NR_144400, intron 14 of 19) MARNA|DNA|TcMar-Mariner 21681 NM_001278789 64689 Hs.721946 NM_031899 ENSG00000114745 GORASP1 GOLPH5|GRASP65|P65 golgi reassembly stacking protein 1 protein-coding 154.154-4 chr14 51607716 51607960 + 1 NA intron (NM_001042481, intron 2 of 14) intron (NM_001042481, intron 2 of 14) -7886 NR_051990 100874185 Hs.578226 NR_047477 ENSG00000258537 FRMD6-AS2 - FRMD6 antisense RNA 2 ncRNA 265.231 chr2 72969849 72970156 + 1 NA intron (NR_138476, intron 11 of 14) intron (NR_138476, intron 11 of 14) 52483 NM_004097 2016 Hs.516090 NM_004097 ENSG00000135638 EMX1 - empty spiracles homeobox 1 protein-coding 191.615-3 chr6 90944887 90945202 + 1 NA Intergenic MamGypLTR1b|LTR|Gypsy -357972 NM_003188 6885 Hs.594838 NM_003188 ENSG00000135341 MAP3K7 CSCF|FMD2|MEKK7|TAK1|TGF1a mitogen-activated protein kinase kinase kinase 7 protein-coding 218.538 chr2 55042113 55042534 + 1 NA intron (NM_001321904, intron 2 of 9) L1ME4b|LINE|L1 5003 NM_001321863 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding 160.461-4 chr7 7378344 7378709 + 1 NA intron (NM_001037763, intron 30 of 34) intron (NM_001037763, intron 30 of 34) 123372 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA 154.308 chr1 85507242 85507420 + 1 NA intron (NM_001134445, intron 1 of 6) AluJb|SINE|Alu -42172 NM_012137 23576 Hs.713411 NM_012137 ENSG00000153904 DDAH1 DDAH|DDAH-1|DDAHI|HEL-S-16 dimethylarginine dimethylaminohydrolase 1 protein-coding 174.615-3 chr11 110857288 110857686 + 1 NA Intergenic Intergenic -144298 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding 240.538 chr3 68305652 68305980 + 1 NA intron (NM_001252216, intron 2 of 4) MIR|SINE|MIR -194821 NR_135532 105377146 Hs.567895 NR_135532 LOC105377146 - uncharacterized LOC105377146 ncRNA 202.923-3 chr18 65782597 65782836 + 1 NA intron (NM_001362438, intron 2 of 11) Tigger17a|DNA|TcMar-Tigger 31704 NM_004361 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding 192.385 chr4 75507722 75508025 + 1 NA intron (NR_037914, intron 3 of 8) L1ME3A|LINE|L1 1423 NR_103725 25898 Hs.48297 NM_015436 ENSG00000163743 RCHY1 ARNIP|CHIMP|PIRH2|PRO1996|RNF199|ZCHY|ZNF363 ring finger and CHY zinc finger domain containing 1 protein-coding 206.077-6 chr5 112774825 112775168 + 1 NA intron (NM_001354895, intron 4 of 15) intron (NM_001354895, intron 4 of 15) 37111 NM_001354905 324 Hs.158932 NM_000038 ENSG00000134982 APC BTPS2|DP2|DP2.5|DP3|GS|PPP1R46 APC regulator of WNT signaling pathway protein-coding 214.308-2 chr6 46399520 46399796 + 1 NA intron (NM_001251973, intron 2 of 4) MLT1C|LTR|ERVL-MaLR -73766 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding 197.846-4 chr20 53247927 53248454 + 1 NA intron (NM_001193421, intron 1 of 2) AluJr|SINE|Alu 62907 NM_001193421 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding 154.538-4 chr2 80052009 80052284 + 1 NA intron (NM_001282598, intron 7 of 17) MIR3|SINE|MIR -185563 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA 177.308 chr10 26150473 26150763 + 1 NA intron (NM_017433, intron 23 of 34) L1MA10|LINE|L1 -65689 NM_000818 2572 Hs.231829 NM_000818 ENSG00000136750 GAD2 GAD65 glutamate decarboxylase 2 protein-coding 199.308-2 chr22 36378769 36379046 + 1 NA intron (NM_002473, intron 1 of 40) MIR3|SINE|MIR 9160 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding 159.769 chr1 79580192 79580459 + 1 NA Intergenic L1MA7|LINE|L1 -573595 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding 162.538-3 chr5 7942598 7942895 + 1 NA Intergenic Intergenic 73598 NM_001364441 4552 Hs.481551 NM_002454 ENSG00000124275 MTRR MSR|cblE 5-methyltetrahydrofolate-homocysteine methyltransferase reductase protein-coding 164.154 chr12 50237027 50237316 + 1 NA intron (NM_016357, intron 2 of 10) L1ME4b|LINE|L1 -2959 NR_031625 100302220 NR_031625 ENSG00000221604 MIR1293 MIRN1293|hsa-mir-1293|mir-1293 microRNA 1293 ncRNA 161.077-3 chr16 5598137 5598313 + 1 NA Intergenic AluSz6|SINE|Alu 18025 NR_110902 101926950 Hs.613285 NR_110902 ENSG00000260338 LINC01570 - long intergenic non-protein coding RNA 1570 ncRNA 190.615-6 chr4 155012221 155012522 + 1 NA Intergenic L4_A_Mam|LINE|RTE-X -196265 NM_001370180 4887 Hs.37125 NM_000910 ENSG00000185149 NPY2R NPY2-R neuropeptide Y receptor Y2 protein-coding 206.923 chr11 96393438 96393747 + 1 NA TTS (NM_001261833) TTS (NM_001261833) 3579 NM_003772 8690 Hs.105940 NM_003772 ENSG00000183340 JRKL HHMJG JRK like protein-coding 213.846-3 chr3 27249286 27249628 + 1 NA intron (NM_199347, intron 24 of 24) L1M1|LINE|L1 -32934 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 229.308 chr3 190857684 190858007 + 1 NA exon (NM_001146686, exon 4 of 5) exon (NM_001146686, exon 4 of 5) 4849 NM_001146686 647309 Hs.518490 NM_001146686 ENSG00000205835 GMNC GEMC1 geminin coiled-coil domain containing protein-coding 185.385-4 chr8 109894312 109894573 + 1 NA Intergenic Intergenic 81329 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 210.462-3 chr5 24528859 24529111 + 1 NA intron (NM_001362460, intron 5 of 9) MADE1|DNA|TcMar-Mariner 115993 NM_001317222 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding 157.308-10 chr8 87959098 87959425 + 1 NA Intergenic Intergenic -85246 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 234.462 chr4 48408904 48409207 + 1 NA intron (NM_020846, intron 6 of 7) L1MA1|LINE|L1 67526 NM_020846 57606 Hs.479677 NM_020846 ENSG00000109171 SLAIN2 KIAA1458 SLAIN motif family member 2 protein-coding 196.692-2 chr6 167014311 167014670 + 1 NA intron (NM_007045, intron 7 of 12) intron (NM_007045, intron 7 of 12) 15093 NM_007045 11116 Hs.487175 NM_007045 ENSG00000213066 FGFR1OP FOP FGFR1 oncogene partner protein-coding 250.462 chr1 71282452 71282846 + 1 NA Intergenic MER99|DNA|hAT? 201325 NR_046217 100852410 Hs.535534 NR_046217 ENSG00000229956 ZRANB2-AS2 - ZRANB2 antisense RNA 2 (head to head) ncRNA 195.077 chr2 67204993 67205248 + 1 NA intron (NR_038844, intron 2 of 7) intron (NR_038844, intron 2 of 7) -8288 NR_110568 101927661 Hs.580508 NR_110568 ENSG00000235885 LOC101927661 - uncharacterized LOC101927661 ncRNA 225.692-10 chr7 31337425 31337742 + 1 NA 3' UTR (NM_022728, exon 2 of 2) 3' UTR (NM_022728, exon 2 of 2) 3143 NM_022728 63974 Hs.45152 NM_022728 ENSG00000164600 NEUROD6 Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2 neuronal differentiation 6 protein-coding 155.385-12 chr5 97800183 97800417 + 1 NA Intergenic HAL1b|LINE|L1 -40458 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA 178.385-7 chr18 60373848 60374114 + 1 NA Intergenic Intergenic -1206 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding 167.308 chr10 15953794 15953983 + 1 NA Intergenic Intergenic -93355 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding 201.538 chr15 56634236 56634579 + 1 NA intron (NM_001002843, intron 20 of 20) intron (NM_001002843, intron 20 of 20) 99679 NM_001288588 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding 217.692 chr8 103766707 103767080 + 1 NA intron (NM_001348497, intron 3 of 22) intron (NM_001348497, intron 3 of 22) -52327 NM_001348499 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 205.923-5 chr2 204379911 204380292 + 1 NA Intergenic Intergenic -165374 NM_001302769 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding 174.846-3 chrX 57349334 57349703 + 1 NA intron (NR_148564, intron 5 of 11) (AT)n|Simple_repeat|Simple_repeat 62664 NR_148564 158584 Hs.496205 NM_174912 ENSG00000165591 FAAH2 AMDD fatty acid amide hydrolase 2 protein-coding 155.846-2 chr1 224846866 224847186 + 1 NA Intergenic MER4D|LTR|ERV1 -82628 NM_144989 127602 Hs.133977 NM_001373 ENSG00000185842 DNAH14 C1orf67|Dnahc14|HL-18|HL18 dynein axonemal heavy chain 14 protein-coding 200.923 chr4 10684875 10685377 + 1 NA promoter-TSS (NM_052964) promoter-TSS (NM_052964) -358 NM_052964 116449 Hs.62772 NM_052964 ENSG00000109684 CLNK MIST cytokine dependent hematopoietic cell linker protein-coding 187.615-3 chr4 33365478 33366075 + 1 NA Intergenic Intergenic 674117 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 178.154-2 chr10 98889939 98890224 + 1 NA intron (NM_021828, intron 3 of 11) intron (NM_021828, intron 3 of 11) 34487 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA 190.615-3 chr20 6522298 6522495 + 1 NA intron (NR_109953, intron 3 of 3) intron (NR_109953, intron 3 of 3) 95664 NR_109953 101929244 Hs.542488 NR_109953 ENSG00000229876 CASC20 - cancer susceptibility 20 ncRNA 223.538-2 chr1 241892650 241893016 + 1 NA Intergenic HAL1M8|LINE|L1 44102 NM_003686 9156 Hs.498248 NM_003686 ENSG00000174371 EXO1 HEX1|hExoI exonuclease 1 protein-coding 189.308-3 chr9 76172434 76172642 + 1 NA intron (NR_120409, intron 12 of 19) intron (NR_120409, intron 12 of 19) 221888 NM_018339 55312 Hs.37558 NM_018339 ENSG00000135002 RFK RIFK riboflavin kinase protein-coding 170.923-2 chr12 29339158 29339446 + 1 NA 3' UTR (NM_016570, exon 14 of 14) 3' UTR (NM_016570, exon 14 of 14) -21454 NR_103860 100506606 Hs.298851 NR_103860 ENSG00000257176 LOC100506606 - uncharacterized LOC100506606 ncRNA 157.538-3 chr15 26487483 26487727 + 1 NA Intergenic L1MC1|LINE|L1 141485 NM_001191321 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding 162.231-6 chr4 31347596 31347848 + 1 NA Intergenic Intergenic -158822 NR_149122 105374565 Hs.112715 NR_149121 LINC02501 - long intergenic non-protein coding RNA 2501 ncRNA 154.385-3 chr1 197033492 197033741 + 1 NA Intergenic L1ME3G|LINE|L1 33651 NM_001994 2165 Hs.435782 NM_001994 ENSG00000143278 F13B FXIIIB coagulation factor XIII B chain protein-coding 252.538-2 chr9 82617303 82617723 + 1 NA Intergenic MSTB|LTR|ERVL-MaLR 445629 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 203.154-4 chr5 95788313 95788541 + 1 NA intron (NM_014899, intron 10 of 11) intron (NM_014899, intron 10 of 11) 34299 NM_002064 2745 Hs.28988 NM_002064 ENSG00000173221 GLRX GRX|GRX1 glutaredoxin protein-coding 193.692-2 chr14 67074759 67074998 + 1 NA intron (NM_001024218, intron 10 of 21) Tigger1|DNA|TcMar-Tigger -114562 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 192.846-2 chr8 106525233 106525557 + 1 NA intron (NM_018002, intron 3 of 15) MIRb|SINE|MIR 77471 NM_001198532 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding 169.308-2 chr18 72295346 72295614 + 1 NA Intergenic Intergenic 248862 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding 157.538 chr11 133512990 133513202 + 1 NA intron (NM_001012393, intron 1 of 7) MamGypsy2-I|LTR|Gypsy 19405 NM_001012393 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding 197.846 chr1 101550798 101551170 + 1 NA Intergenic Intergenic 227147 NR_126402 104355286 Hs.568671 NR_126402 ENSG00000231671 LINC01307 - long intergenic non-protein coding RNA 1307 ncRNA 245.923-2 chr14 60265785 60266221 + 1 NA intron (NM_177951, intron 2 of 3) L1M6|LINE|L1 16782 NM_021003 5494 Hs.130036 NM_021003 ENSG00000100614 PPM1A PP2C-ALPHA|PP2CA|PP2Calpha protein phosphatase, Mg2+/Mn2+ dependent 1A protein-coding 211.308 chr1 225344283 225344575 + 1 NA intron (NM_001367479, intron 69 of 85) L1PA13|LINE|L1 83609 NM_002296 3930 Hs.435166 NM_002296 ENSG00000143815 LBR C14SR|DHCR14B|LMN2R|PHA|PHASK|TDRD18 lamin B receptor protein-coding 178.538-2 chr3 25834837 25835132 + 1 NA Intergenic (TG)n|Simple_repeat|Simple_repeat 38711 NR_034055 285326 Hs.145246 NR_034055 ENSG00000230891 LINC00692 - long intergenic non-protein coding RNA 692 ncRNA 176.769-4 chr17 72004599 72004812 + 1 NA Intergenic Intergenic 21274 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 166.462-2 chr12 32864367 32864579 + 1 NA intron (NM_001005242, intron 4 of 12) L1ME1|LINE|L1 32373 NM_004572 5318 Hs.164384 NM_004572 ENSG00000057294 PKP2 ARVD9 plakophilin 2 protein-coding 155.077-15 chr8 57166845 57167039 + 1 NA Intergenic L2c|LINE|L2 -51334 NR_038235 100507651 Hs.371831 NR_038235 ENSG00000253301 LINC01606 - long intergenic non-protein coding RNA 1606 ncRNA 250.308-2 chr8 129505030 129505409 + 1 NA intron (NR_130917, intron 1 of 3) L1MDa|LINE|L1 -21077 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA 183.692-2 chr16 81800522 81800782 + 1 NA intron (NM_002661, intron 2 of 32) L1PA10|LINE|L1 21361 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding 204.461-2 chr4 87170088 87170435 + 1 NA intron (NM_001292006, intron 7 of 9) intron (NM_001292006, intron 7 of 9) 50007 NM_001292003 57563 Hs.106601 NM_020803 ENSG00000145332 KLHL8 - kelch like family member 8 protein-coding 188.154-3 chr3 181577726 181578077 + 1 NA intron (NR_075091, intron 4 of 7) intron (NR_075091, intron 4 of 7) -32433 NR_004053 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA 169.231-9 chr8 131109604 131109811 + 1 NA Intergenic Tigger1|DNA|TcMar-Tigger -68798 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 177.154 chr12 44161157 44161415 + 1 NA intron (NM_001286213, intron 3 of 6) MIRc|SINE|MIR 325205 NM_032256 84216 Hs.444668 NM_032256 ENSG00000139173 TMEM117 - transmembrane protein 117 protein-coding 260.615 chr20 55817379 55818060 + 1 NA Intergenic Intergenic 187800 NM_080617 140689 Hs.126141 NM_080617 ENSG00000054803 CBLN4 CBLNL1 cerebellin 4 precursor protein-coding 171.769-7 chrX 135322544 135322888 + 1 NA intron (NM_007131, intron 1 of 6) LTR52-int|LTR|ERVL 13236 NM_001358449 110806299 NM_001358449 ENSG00000283644 ETDC - embryonic testis differentiation homolog C protein-coding 189.769-2 chr8 61734678 61735021 + 1 NA Intergenic Intergenic 20061 NR_039680 100616484 NR_039680 ENSG00000264408 MIR4470 mir-4470 microRNA 4470 ncRNA 191.846 chr2 227448077 227448378 + 1 NA Intergenic Intergenic -23905 NR_049888 100847081 NR_049888 ENSG00000284092 MIR5703 mir-5703 microRNA 5703 ncRNA 156.615-8 chr6 141321162 141321382 + 1 NA Intergenic L1M3d|LINE|L1 637458 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA 195.692-3 chr4 55433100 55433487 + 1 NA 3' UTR (NM_001267843, exon 24 of 24) 3' UTR (NM_001267843, exon 24 of 24) 37336 NM_018475 55858 Hs.479766 NM_018475 ENSG00000134851 TMEM165 CDG2K|FT27|GDT1|TMPT27|TPARL transmembrane protein 165 protein-coding 155.385-8 chr20 44928104 44928421 + 1 NA intron (NR_134983, intron 7 of 13) AluSx1|SINE|Alu -3300 NR_134984 80336 Hs.641481 NM_001124756 ENSG00000101104 PABPC1L C20orf119|EPAB|PABPC1L1|dJ1069P2.3 poly(A) binding protein cytoplasmic 1 like protein-coding 193.231-4 chr12 28822380 28822952 + 1 NA Intergenic MER3|DNA|hAT-Charlie -326612 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 201.308-2 chr14 45909351 45909743 + 1 NA Intergenic L1MA6|LINE|L1 -154612 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 206.538-4 chr3 118494844 118495126 + 1 NA Intergenic Intergenic -146783 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 239.154 chr17 43081444 43081726 + 1 NA intron (NM_007300, intron 12 of 23) intron (NM_007300, intron 12 of 23) 42530 NM_007298 672 Hs.194143 NM_007294 ENSG00000012048 BRCA1 BRCAI|BRCC1|BROVCA1|FANCS|IRIS|PNCA4|PPP1R53|PSCP|RNF53 BRCA1 DNA repair associated protein-coding 200.308-3 chr8 126716250 126716575 + 1 NA Intergenic Intergenic -157934 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 249.923 chr7 87886661 87887112 + 1 NA exon (NM_006716, exon 4 of 12) exon (NM_006716, exon 4 of 12) 10393 NM_001318060 10926 Hs.485380 NM_006716 ENSG00000006634 DBF4 ASK|CHIF|DBF4A|ZDBF1 DBF4 zinc finger protein-coding 175.154 chr10 24839606 24839890 + 1 NA Intergenic L1MEc|LINE|L1 112858 NM_001282786 56952 Hs.405619 NM_020200 ENSG00000099256 PRTFDC1 HHGP phosphoribosyl transferase domain containing 1 protein-coding 195.692 chr2 51144197 51144432 + 1 NA intron (NR_135237, intron 2 of 10) Zaphod|DNA|hAT-Tip100 111713 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 210.154 chr8 88317959 88318347 + 1 NA intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 9330 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 174.923-5 chr3 103908978 103909234 + 1 NA Intergenic Intergenic -384990 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 227.461 chr5 25487458 25488046 + 1 NA Intergenic L1MC3|LINE|L1 296799 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 272.231 chr5 85010410 85010793 + 1 NA Intergenic L1ME2|LINE|L1 -625721 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 154.692-5 chr5 83911215 83911415 + 1 NA Intergenic Intergenic -190460 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding 264.538 chr1 32134811 32135125 + 1 NA intron (NM_012316, intron 1 of 13) AluSz|SINE|Alu 26912 NM_012316 23633 Hs.470588 NM_012316 ENSG00000025800 KPNA6 IPOA7|KPNA7 karyopherin subunit alpha 6 protein-coding 161.154-3 chr3 153031990 153032649 + 1 NA Intergenic Intergenic -129907 NM_002886 5912 Hs.98643 NM_002886 ENSG00000181467 RAP2B - RAP2B, member of RAS oncogene family protein-coding 165.462-3 chr8 25276022 25276310 + 1 NA intron (NM_024940, intron 4 of 51) intron (NM_024940, intron 4 of 51) -69236 NR_106936 102465527 NR_106936 ENSG00000274988 MIR6876 hsa-mir-6876 microRNA 6876 ncRNA 207.385 chr16 7725276 7725955 + 1 NA Intergenic L1PBa|LINE|L1 392770 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding 207.692-7 chr7 7360991 7361334 + 1 NA intron (NM_001037763, intron 33 of 34) intron (NM_001037763, intron 33 of 34) 106008 NR_108073 101927354 Hs.520664 NR_108073 LOC101927354 - uncharacterized LOC101927354 ncRNA 176.846-2 chr16 8679603 8679918 + 1 NA intron (NM_020686, intron 1 of 15) intron (NM_020686, intron 1 of 15) 5143 NM_020686 18 Hs.336768 NM_000663 ENSG00000183044 ABAT GABA-AT|GABAT|NPD009 4-aminobutyrate aminotransferase protein-coding 174.769-8 chr5 106890091 106890323 + 1 NA intron (NR_104671, intron 2 of 3) intron (NR_104671, intron 2 of 3) 120807 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 192.308-4 chr2 177704020 177704248 + 1 NA intron (NR_136171, intron 4 of 4) L2c|LINE|L2 30812 NR_136171 105373764 Hs.666361 NR_136171 ENSG00000229941 LOC105373764 - uncharacterized LOC105373764 ncRNA 189.846 chr11 28083888 28084214 + 1 NA intron (NM_031217, intron 7 of 16) intron (NM_031217, intron 7 of 16) 24105 NM_031217 81930 Hs.301052 NM_031217 ENSG00000121621 KIF18A MS-KIF18A|PPP1R99 kinesin family member 18A protein-coding 231.539 chr10 114842543 114842852 + 1 NA intron (NM_001135051, intron 5 of 16) intron (NM_001135051, intron 5 of 16) 20917 NM_001135051 57700 Hs.192619 NM_020940 ENSG00000151553 FAM160B1 KIAA1600|bA106M7.3 family with sequence similarity 160 member B1 protein-coding 210.615-3 chr8 129272774 129273260 + 1 NA Intergenic Intergenic -31777 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 163.462-4 chr17 82652224 82652462 + 1 NA Intergenic MLT1D|LTR|ERVL-MaLR -3899 NM_019613 56270 Hs.132161 NM_019613 ENSG00000141580 WDR45B NEDSBAS|WDR45L|WIPI-3|WIPI3 WD repeat domain 45B protein-coding 181.538-2 chr2 62699127 62699329 + 1 NA intron (NM_001142615, intron 1 of 22) MamGypsy2-I|LTR|Gypsy -6396 NM_001354212 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding 227.308-2 chr9 101726860 101727271 + 1 NA intron (NM_133445, intron 1 of 8) intron (NM_133445, intron 1 of 8) 11515 NM_133445 116443 Hs.654783 NM_133445 ENSG00000198785 GRIN3A GluN3A|NMDAR-L|NR3A glutamate ionotropic receptor NMDA type subunit 3A protein-coding 160.769 chr1 106277668 106278023 + 1 NA Intergenic HERVL-int|LTR|ERVL -249592 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA 162.231-2 chr15 26331880 26332214 + 1 NA Intergenic L1M5|LINE|L1 216234 NR_038852 503519 Hs.371380 NR_038851 ENSG00000259150 LINC00929 - long intergenic non-protein coding RNA 929 ncRNA 216.308-2 chr6 20929228 20929541 + 1 NA intron (NM_017774, intron 9 of 15) intron (NM_017774, intron 9 of 15) 394927 NM_017774 54901 Hs.657604 NM_017774 ENSG00000145996 CDKAL1 - CDK5 regulatory subunit associated protein 1 like 1 protein-coding 171.769-5 chr7 17748374 17748631 + 1 NA Intergenic Intergenic -189593 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA 247.308 chr20 8527878 8528309 + 1 NA intron (NM_182734, intron 3 of 32) L1ME4c|LINE|L1 279389 NR_046809 100874337 Hs.662218 NR_046809 ENSG00000225479 PLCB1-IT1 - PLCB1 intronic transcript 1 ncRNA 174.231-6 chr3 173083055 173083373 + 1 NA intron (NM_031955, intron 2 of 10) intron (NM_031955, intron 2 of 10) 58021 NM_031955 83893 Hs.444236 NM_031955 ENSG00000144962 SPATA16 NYD-SP12|SPGF6 spermatogenesis associated 16 protein-coding 217.846-3 chr4 154582505 154582842 + 1 NA TTS (NM_000508) TTS (NM_000508) 8069 NM_000508 2243 Hs.351593 NM_000508 ENSG00000171560 FGA Fib2 fibrinogen alpha chain protein-coding 256.538 chr17 71822108 71822759 + 1 NA Intergenic THE1B|LTR|ERVL-MaLR 203546 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 227.231 chr5 37022533 37023030 + 1 NA intron (NM_015384, intron 29 of 45) intron (NM_015384, intron 29 of 45) 146012 NM_015384 25836 Hs.481927 NM_015384 ENSG00000164190 NIPBL CDLS|CDLS1|IDN3|IDN3-B|Scc2 NIPBL cohesin loading factor protein-coding 187.923-5 chr18 62311361 62311644 + 1 NA Intergenic Intergenic -13785 NM_001270950 8792 Hs.204044 NM_003839 ENSG00000141655 TNFRSF11A CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER TNF receptor superfamily member 11a protein-coding 287.462 chr9 75006676 75007426 + 1 NA intron (NM_001320497, intron 3 of 7) intron (NM_001320497, intron 3 of 7) 20100 NM_001320497 138199 Hs.567688 NM_152420 ENSG00000156017 CARNMT1 C9orf41|UPF0586 carnosine N-methyltransferase 1 protein-coding 182.846-2 chr13 78434912 78435293 + 1 NA intron (NR_047001, intron 3 of 5) intron (NR_047001, intron 3 of 5) -161020 NR_158457 780529 Hs.587755 NR_158457 LOC780529 - uncharacterized LOC780529 ncRNA 183.385-3 chr8 137119384 137119757 + 1 NA Intergenic THE1C|LTR|ERVL-MaLR 294018 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 308.385 chr1 114758920 114759292 + 1 NA Intergenic Intergenic -1056 NM_001242891 7812 Hs.69855 NM_007158 ENSG00000009307 CSDE1 D1S155E|UNR cold shock domain containing E1 protein-coding 193.923-3 chr5 162208362 162208685 + 1 NA Intergenic Intergenic 140881 NM_000816 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 217.231 chr11 59463038 59463404 + 1 NA Intergenic Intergenic 6260 NM_001004708 219983 Hs.553650 NM_001004708 ENSG00000166884 OR4D6 OR11-250 olfactory receptor family 4 subfamily D member 6 protein-coding 242.154 chr13 82357021 82357401 + 1 NA Intergenic Intergenic -1130228 NR_047494 100861546 Hs.539621 NR_047494 ENSG00000260094 LINC00564 - long intergenic non-protein coding RNA 564 ncRNA 276.692 chr3 45966791 45967176 + 1 NA exon (NM_024513, exon 8 of 18) exon (NM_024513, exon 8 of 18) 23519 NM_006564 10663 Hs.34526 NM_006564 ENSG00000172215 CXCR6 BONZO|CD186|STRL33|TYMSTR C-X-C motif chemokine receptor 6 protein-coding 164.923-3 chr12 61524915 61525102 + 1 NA Intergenic MIRb|SINE|MIR 667831 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding 181.615-2 chr14 49907012 49907353 + 1 NA Intergenic Intergenic 14100 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding 204.538-2 chr18 2143970 2144381 + 1 NA Intergenic MIR|SINE|MIR 427330 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 168.846-5 chr6 23838746 23838998 + 1 NA Intergenic Intergenic -287343 NM_080723 140767 Hs.726270 NM_080723 ENSG00000152954 NRSN1 VMP|p24 neurensin 1 protein-coding 171.923-5 chr5 54531029 54531335 + 1 NA intron (NM_001145427, intron 1 of 1) intron (NM_001145427, intron 1 of 1) 13423 NM_052870 112574 Hs.432755 NM_052870 ENSG00000178996 SNX18 SH3PX2|SH3PXD3B|SNAG1 sorting nexin 18 protein-coding 209.077 chr1 188210783 188211067 + 1 NA Intergenic AluJb|SINE|Alu 767297 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 169.538 chr11 129347489 129347879 + 1 NA Intergenic L1MB7|LINE|L1 -28164 NM_003658 8538 Hs.591944 NM_003658 ENSG00000043039 BARX2 - BARX homeobox 2 protein-coding 205.692 chr1 225659280 225659596 + 1 NA Intergenic Intergenic -6315 NM_018212 55740 Hs.497893 NM_018212 ENSG00000154380 ENAH ENA|MENA|NDPP1 ENAH actin regulator protein-coding 206.231-2 chr8 75233069 75233400 + 1 NA intron (NR_103849, intron 1 of 1) intron (NR_103849, intron 1 of 1) 45247 NR_103850 101805492 Hs.571424 NR_103848 CASC9 ESCCAL-1|ESSCAL1|LINC00981|linc-JPH1 cancer susceptibility 9 ncRNA 164.231-5 chr2 60901961 60902385 + 1 NA intron (NM_002908, intron 4 of 10) intron (NM_002908, intron 4 of 10) 20599 NM_002908 5966 Hs.631886 NM_002908 ENSG00000162924 REL C-Rel REL proto-oncogene, NF-kB subunit protein-coding 182.231-2 chr20 55443229 55443520 + 1 NA Intergenic Intergenic -16177 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA 256.615-2 chr5 6901545 6901900 + 1 NA Intergenic Intergenic -73801 NR_036242 100422999 NR_036242 ENSG00000283420 MIR4278 - microRNA 4278 ncRNA 168.692-2 chr10 72865962 72866238 + 1 NA intron (NM_001270679, intron 5 of 7) intron (NM_001270679, intron 5 of 7) -27639 NR_130125 170392 Hs.8366 NM_152635 ENSG00000138315 OIT3 LZP oncoprotein induced transcript 3 protein-coding 219.462 chr4 30784233 30784604 + 1 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 64049 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 228.538 chr3 80567021 80567524 + 1 NA Intergenic L2|LINE|L2 -197625 NR_147143 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA 157.077-11 chr3 193292664 193292963 + 1 NA intron (NM_198505, intron 25 of 29) intron (NM_198505, intron 25 of 29) -14431 NR_046758 100874218 Hs.407490 NR_046758 ATP13A5-AS1 - ATP13A5 antisense RNA 1 ncRNA 246.846 chr2 122932617 122933024 + 1 NA Intergenic Intergenic 140661 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 193.538-6 chr9 34956679 34956990 + 1 NA promoter-TSS (NR_136307) promoter-TSS (NR_136307) -653 NM_001347982 23349 Hs.7989 NM_015297 ENSG00000122733 PHF24 - PHD finger protein 24 protein-coding 204.846-2 chr8 85967171 85967416 + 1 NA Intergenic Intergenic 102375 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding 215.769 chr4 134819161 134819575 + 1 NA Intergenic Intergenic 304191 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA 224.231-2 chr8 140934484 140934746 + 1 NA intron (NM_001352699, intron 1 of 35) L2|LINE|L2 66389 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding 208.231-3 chr3 94288206 94288530 + 1 NA Intergenic Tigger1|DNA|TcMar-Tigger 225307 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding 169.154-7 chr7 93194003 93194321 + 1 NA intron (NM_001346642, intron 8 of 9) intron (NM_001346642, intron 8 of 9) 25409 NM_198151 253012 Hs.443169 NM_198151 ENSG00000188175 HEPACAM2 MIKI HEPACAM family member 2 protein-coding 180.769 chr10 100841333 100841573 + 1 NA Intergenic L1MC5|LINE|L1 -71510 NM_001243770 55719 Hs.447458 NM_018121 ENSG00000119906 SLF2 C10orf6|FAM178A SMC5-SMC6 complex localization factor 2 protein-coding 202.385 chr2 27429638 27430001 + 1 NA intron (NM_001321359, intron 1 of 18) intron (NM_001321359, intron 1 of 18) 1188 NM_001321363 29959 Hs.515876 NM_013392 ENSG00000115216 NRBP1 BCON3|MADM|MUDPNP|NRBP nuclear receptor binding protein 1 protein-coding 161.538-6 chr12 51319552 51319892 + 1 NA intron (NM_001290007, intron 1 of 12) L1MC4|LINE|L1 4452 NM_001364779 51411 Hs.14770 NM_016293 ENSG00000110934 BIN2 BRAP-1 bridging integrator 2 protein-coding 166.308-6 chr5 106968320 106968616 + 1 NA intron (NR_104671, intron 2 of 3) intron (NR_104671, intron 2 of 3) 42546 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 228.923 chr1 219074799 219075446 + 1 NA intron (NR_031644, intron 6 of 6) intron (NR_031644, intron 6 of 6) 98666 NR_038845 643723 Hs.519774 NR_038845 LYPLAL1-DT LYPLAL1-AS1 LYPLAL1 divergent transcript ncRNA 188.846 chr19 33973335 33973557 + 1 NA Intergenic Intergenic 176576 NM_024076 79047 Hs.221873 NM_024076 ENSG00000153885 KCTD15 - potassium channel tetramerization domain containing 15 protein-coding 179.846 chr2 78476529 78476851 + 1 NA Intergenic Kanga1|DNA|TcMar-Tc2 -68841 NR_136311 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA 258.539 chr5 42379197 42379742 + 1 NA Intergenic AluSz|SINE|Alu -43970 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 225.385 chr14 42833086 42833456 + 1 NA Intergenic Kanga1|DNA|TcMar-Tc2 1226415 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 158.231-5 chr18 47496213 47496467 + 1 NA intron (NR_147192, intron 1 of 2) MER103C|DNA|hAT-Charlie 115844 NR_039753 100616264 NR_039753 ENSG00000266582 MIR4527 - microRNA 4527 ncRNA 200.308-2 chr5 108036318 108036926 + 1 NA intron (NM_001163315, intron 6 of 8) intron (NM_001163315, intron 6 of 8) 345476 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding 174.615-6 chr2 42995384 42995653 + 1 NA Intergenic Intergenic 44025 NR_110585 102723854 Hs.570165 NR_110585 ENSG00000231826 LINC01819 - long intergenic non-protein coding RNA 1819 ncRNA 226.385 chr3 102748412 102748776 + 1 NA Intergenic Intergenic 313579 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 161.769-7 chr7 37824016 37824257 + 1 NA Intergenic MIR|SINE|MIR -24461 NM_016616 51314 Hs.723454 NM_016616 ENSG00000086288 NME8 CILD6|HEL-S-99|NM23-H8|SPTRX2|TXNDC3|sptrx-2 NME/NM23 family member 8 protein-coding 218.077-2 chr1 214882348 214882702 + 1 NA Intergenic L1MB7|LINE|L1 -123017 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding 205.769 chr11 84411431 84411906 + 1 NA intron (NM_001142699, intron 7 of 27) intron (NM_001142699, intron 7 of 27) -94329 NM_001206769 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 176.461-4 chr2 35773893 35774288 + 1 NA Intergenic LTR81B|LTR|Gypsy 302685 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 167.846-8 chr6 143770008 143770310 + 1 NA intron (NM_001100165, intron 5 of 11) L1MB3|LINE|L1 -73114 NM_001329953 84946 Hs.185675 NM_032860 ENSG00000135521 LTV1 C6orf93|dJ468K18.4 LTV1 ribosome biogenesis factor protein-coding 211.385-3 chr4 99868859 99869296 + 1 NA 3' UTR (NM_014395, exon 9 of 9) 3' UTR (NM_014395, exon 9 of 9) 25350 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding 161.231 chr12 1981081 1981422 + 1 NA intron (NM_152640, intron 3 of 8) intron (NM_152640, intron 3 of 8) 23206 NM_001319292 196513 Hs.130934 NM_152640 ENSG00000151065 DCP1B DCP1 decapping mRNA 1B protein-coding 186.308-6 chr8 116554405 116554901 + 1 NA Intergenic Intergenic -97447 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA 246.231-2 chr5 90825952 90826398 + 1 NA intron (NR_003149, intron 76 of 89) intron (NR_003149, intron 76 of 89) 267378 NR_003149 84059 Hs.591777 NM_032119 ENSG00000164199 ADGRV1 FEB4|GPR98|MASS1|USH2B|USH2C|VLGR1|VLGR1b adhesion G protein-coupled receptor V1 protein-coding 206.308 chr3 141594951 141595354 + 1 NA intron (NM_001303246, intron 20 of 24) L1MB8|LINE|L1 -68047 NR_136190 646730 Hs.570677 NR_136190 LINC02618 - long intergenic non-protein coding RNA 2618 ncRNA 190.077-3 chr8 84047763 84048089 + 1 NA Intergenic Intergenic -134861 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 217.308 chr12 46837822 46838310 + 1 NA Intergenic Intergenic -12069 NM_018018 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding 188.846-3 chr5 52797450 52797710 + 1 NA intron (NM_181501, intron 1 of 28) intron (NM_181501, intron 1 of 28) 9664 NM_015946 53918 Hs.644352 NM_015946 ENSG00000152684 PELO CGI-17|PRO1770 pelota mRNA surveillance and ribosome rescue factor protein-coding 190.154-11 chr9 111331472 111331853 + 1 NA Intergenic L1MC4|LINE|L1 -1438 NM_205859 26248 Hs.381312 NM_205859 ENSG00000171133 OR2K2 HSHTPCRH06|HTPCRH06|OR2AN1P|OR2AR1P olfactory receptor family 2 subfamily K member 2 protein-coding 165.385-4 chr15 56204639 56204935 + 1 NA intron (NM_001370561, intron 4 of 11) intron (NM_001370561, intron 4 of 11) -14855 NM_001368074 64864 Hs.745089 NM_022841 ENSG00000181827 RFX7 RFXDC2 regulatory factor X7 protein-coding 155.846-11 chr8 99769958 99770405 + 1 NA intron (NM_017890, intron 40 of 61) intron (NM_017890, intron 40 of 61) 123526 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding 188.462-3 chr14 78233172 78233473 + 1 NA intron (NR_073547, intron 1 of 20) intron (NR_073547, intron 1 of 20) 62949 NR_158974 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 185.077-4 chr6 129231911 129232306 + 1 NA intron (NM_000426, intron 12 of 64) intron (NM_000426, intron 12 of 64) 348967 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding 170.538-6 chr2 123043049 123043330 + 1 NA Intergenic Intergenic 30292 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 252.769 chr1 189273573 189274078 + 1 NA Intergenic Intergenic 1202185 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 162.846-6 chr21 30831956 30832177 + 1 NA Intergenic MIR|SINE|MIR -2307 NM_181606 337878 Hs.407656 NM_181606 ENSG00000274749 KRTAP7-1 KAP7.1 keratin associated protein 7-1 (gene/pseudogene) protein-coding 174.154-3 chr1 221578387 221578592 + 1 NA Intergenic L1MEc|LINE|L1 158411 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 259.154 chr1 198763138 198763726 + 1 NA Intergenic Intergenic 95550 NR_029612 406955 NR_029612 ENSG00000207975 MIR181B1 MIRN181B1|mir-181b-1 microRNA 181b-1 ncRNA 196.692 chr3 11079648 11079982 + 1 NA Intergenic Arthur1B|DNA|hAT-Tip100 -57423 NM_001098213 3269 Hs.1570 NM_000861 ENSG00000196639 HRH1 H1-R|H1R|HH1R|hisH1 histamine receptor H1 protein-coding 169.077-4 chr7 133352631 133352806 + 1 NA intron (NM_021807, intron 5 of 17) L1MB3|LINE|L1 61837 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA 226.077-2 chr3 114911180 114911518 + 1 NA intron (NM_001348805, intron 3 of 10) L1M2|LINE|L1 -10724 NR_121662 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding 207.308-6 chr8 135738755 135738972 + 1 NA Intergenic Intergenic 281407 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 199.308-3 chr7 83768143 83768355 + 1 NA Intergenic Intergenic -119110 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding 158.923-11 chr8 137681641 137682227 + 1 NA Intergenic LTR16|LTR|ERVL -268346 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 189.923-6 chr8 81247631 81247987 + 1 NA Intergenic MER44A|DNA|TcMar-Tigger -32727 NM_001444 2171 Hs.408061 NM_001444 ENSG00000164687 FABP5 E-FABP|EFABP|KFABP|PA-FABP|PAFABP fatty acid binding protein 5 protein-coding 158.077-5 chr21 31714002 31714175 + 1 NA intron (NM_020706, intron 1 of 19) MIRb|SINE|MIR 18030 NM_001145444 57466 Hs.17255 NM_020706 ENSG00000156304 SCAF4 SFRS15|SRA4 SR-related CTD associated factor 4 protein-coding 170.385-2 chr15 69804643 69804908 + 1 NA Intergenic Intergenic -30459 NR_026764 414926 Hs.569502 NR_026764 ENSG00000245750 LINC00593 C15orf50 long intergenic non-protein coding RNA 593 ncRNA 228.769-2 chr2 169383662 169384095 + 1 NA Intergenic L1MB4|LINE|L1 -21344 NM_004525 4036 Hs.657729 NM_004525 ENSG00000081479 LRP2 DBS|GP330|LRP-2 LDL receptor related protein 2 protein-coding 175.308 chr2 13770568 13770946 + 1 NA Intergenic Intergenic 630201 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA 165.385-10 chr3 54363754 54364008 + 1 NA intron (NM_018398, intron 3 of 37) MLT1O|LTR|ERVL-MaLR 241329 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding 248.077-2 chr5 117594891 117595376 + 1 NA Intergenic Intergenic -135228 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA 155.692-5 chr21 20214093 20214292 + 1 NA Intergenic MLT1J|LTR|ERVL-MaLR 44493 NR_151724 111216285 Hs.561034 NR_151724 LINC02573 - long intergenic non-protein coding RNA 2573 ncRNA 167.615-3 chr2 240486238 240486435 + 1 NA intron (NM_017844, intron 11 of 13) L1M4b|LINE|L1 -29636 NR_161169 100130449 Hs.655753 NR_024014 LOC100130449 - uncharacterized LOC100130449 ncRNA 165.923-4 chr18 1079540 1080108 + 1 NA Intergenic Intergenic -151831 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 183.154-3 chr12 60425293 60425612 + 1 NA Intergenic Intergenic 736082 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 184.154-3 chr14 49921345 49921734 + 1 NA Intergenic Intergenic 28457 NM_001663 382 Hs.525330 NM_001663 ENSG00000165527 ARF6 - ADP ribosylation factor 6 protein-coding 213.308-2 chr13 107522205 107522481 + 1 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) 8905 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA 182.385 chr12 111516559 111517122 + 1 NA intron (NR_132311, intron 9 of 23) intron (NR_132311, intron 9 of 23) 81978 NM_001291424 10019 Hs.506784 NM_005475 ENSG00000111252 SH2B3 IDDM20|LNK SH2B adaptor protein 3 protein-coding 183.923-6 chr8 78742097 78742543 + 1 NA intron (NM_001199886, intron 2 of 4) AluSx3|SINE|Alu -17946 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo 232.615 chr18 52697661 52698030 + 1 NA intron (NM_005215, intron 1 of 28) intron (NM_005215, intron 1 of 28) 357648 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding 208.154-6 chr6 68080718 68080995 + 1 NA Intergenic L1ME5|LINE|L1 25505 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 204.385-2 chr5 86976492 86976744 + 1 NA Intergenic Intergenic 138336 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA 162.385-3 chr5 121328736 121329059 + 1 NA Intergenic MIR|SINE|MIR 6347 NR_104999 102467226 NR_104999 LOC102467226 - uncharacterized LOC102467226 ncRNA 192.231 chr20 10929028 10929406 + 1 NA Intergenic Intergenic -19945 NR_109866 101929413 Hs.385604 NR_109866 ENSG00000232900 LOC101929413 - uncharacterized LOC101929413 ncRNA 161.692-11 chrX 28802021 28802259 + 1 NA intron (NM_014271, intron 2 of 10) intron (NM_014271, intron 2 of 10) 214694 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding 206.385-5 chr8 121500531 121500816 + 1 NA Intergenic L1MA7|LINE|L1 -138673 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 163.846-6 chr14 77230833 77231012 + 1 NA intron (NM_020431, intron 6 of 23) L1ME3A|LINE|L1 -35296 NR_031661 100302236 NR_031661 ENSG00000221754 MIR1260A MIR1260|MIRN1260|hsa-mir-1260|hsa-mir-1260a|mir-1260a microRNA 1260a ncRNA 223.077-2 chr7 36849881 36850271 + 1 NA Intergenic Tigger2a|DNA|TcMar-Tigger 69356 NR_031604 100302113 NR_031604 ENSG00000221325 MIR1200 MIRN1200|hsa-mir-1200 microRNA 1200 ncRNA 155.462-6 chr7 51333671 51334043 + 1 NA Intergenic ERVL-B4-int|LTR|ERVL -16996 NM_001287436 23242 Hs.99141 NM_015198 ENSG00000106078 COBL - cordon-bleu WH2 repeat protein protein-coding 258.462 chr7 27864334 27864691 + 1 NA intron (NM_175061, intron 3 of 4) intron (NM_175061, intron 3 of 4) 124417 NM_001362794 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding 206.615-4 chr2 114257165 114257499 + 1 NA Intergenic Intergenic -185309 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 257.385 chr20 42088471 42088810 + 1 NA intron (NM_133170, intron 28 of 31) MER58A|DNA|hAT-Charlie -470263 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 212.462-3 chr4 126364123 126364498 + 1 NA Intergenic Intergenic 857051 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA 201.769 chr1 63742226 63742556 + 1 NA Intergenic L1P4|LINE|L1 -31626 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding 195.077-2 chr6 151852157 151852400 + 1 NA intron (NM_001291230, intron 3 of 8) intron (NM_001291230, intron 3 of 8) 43171 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding 182.154-8 chr8 90723051 90723350 + 1 NA Intergenic MIR|SINE|MIR -68575 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding 189.308-2 chr11 28892734 28892932 + 1 NA Intergenic MER94|DNA|hAT-Blackjack -415285 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA 162.385 chr12 101667189 101667506 + 1 NA intron (NM_206820, intron 21 of 29) intron (NM_206820, intron 21 of 29) -30293 NM_020244 56994 Hs.293077 NM_020244 ENSG00000111666 CHPT1 CPT|CPT1 choline phosphotransferase 1 protein-coding 152.154-14 chr8 130416895 130417187 + 1 NA intron (NM_001362925, intron 1 of 29) intron (NM_001362925, intron 1 of 29) 26619 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 247.462 chr14 56621404 56621703 + 1 NA exon (NM_017799, exon 11 of 16) exon (NM_017799, exon 11 of 16) 41755 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding 220.231 chr6 162141144 162141567 + 1 NA intron (NM_004562, intron 4 of 11) intron (NM_004562, intron 4 of 11) -585777 NM_152410 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding 227.385 chr12 28515709 28516184 + 1 NA intron (NM_001352082, intron 13 of 13) L1ME3A|LINE|L1 -325208 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA 168.461 chr12 130065139 130065465 + 1 NA Intergenic Intergenic -6033 NR_146538 105370078 NR_146538 LINC02419 - long intergenic non-protein coding RNA 2419 ncRNA 215.077-2 chr17 60387185 60387642 + 1 NA intron (NM_032582, intron 1 of 33) intron (NM_032582, intron 1 of 33) 4720 NM_032582 84669 Hs.132868 NM_032582 ENSG00000170832 USP32 NY-REN-60|USP10 ubiquitin specific peptidase 32 protein-coding 189.538-3 chr5 85155373 85155722 + 1 NA Intergenic L1ME5|LINE|L1 -770667 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 201.308-4 chr18 13893513 13893893 + 1 NA intron (NM_001291911, intron 1 of 1) intron (NM_001291911, intron 1 of 1) 21833 NM_000529 4158 Hs.248144 NM_000529 ENSG00000185231 MC2R ACTHR melanocortin 2 receptor protein-coding 339.538 chr12 15540448 15541033 + 1 NA intron (NM_030667, intron 12 of 26) intron (NM_030667, intron 12 of 26) -5871 NM_030668 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding 191.077-2 chr14 47286166 47286405 + 1 NA intron (NM_001113498, intron 2 of 16) L1MA4|LINE|L1 56961 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 193.923-2 chr2 41760324 41760662 + 1 NA Intergenic Intergenic -117062 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 174.846-2 chr2 159562096 159562354 + 1 NA intron (NM_001329857, intron 1 of 36) intron (NM_001329857, intron 1 of 36) -53069 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA 162.154-4 chr7 89716195 89716431 + 1 NA Intergenic Intergenic -403087 NR_003551 442523 Hs.406964 NR_003551 ENSG00000235436 DPY19L2P4 - DPY19L2 pseudogene 4 pseudo 231.462 chr5 27843804 27844187 + 1 NA Intergenic L3|LINE|CR1 371703 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA 185.154-2 chr2 80430401 80430714 + 1 NA intron (NM_001282599, intron 3 of 11) intron (NM_001282599, intron 3 of 11) 117178 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 164.231-2 chr1 171005280 171005530 + 1 NA intron (NM_001163629, intron 15 of 21) L1M3a|LINE|L1 69871 NM_025063 80133 Hs.591489 NM_025063 ENSG00000117501 MROH9 ARMC11|C1orf129 maestro heat like repeat family member 9 protein-coding 160.462-3 chr13 64148053 64148248 + 1 NA Intergenic Intergenic -72139 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA 186.923-12 chr6 50523875 50524196 + 1 NA Intergenic Tigger17a|DNA|TcMar-Tigger -189509 NM_172238 83741 Hs.434107 NM_172238 ENSG00000008197 TFAP2D TFAP2BL1 transcription factor AP-2 delta protein-coding 191.231 chr1 212651761 212652127 + 1 NA Intergenic MLT1L|LTR|ERVL-MaLR 27470 NM_153606 149647 Hs.129293 NM_153606 ENSG00000162771 FAM71A GARI-L4 family with sequence similarity 71 member A protein-coding 171.615 chr3 95522991 95523296 + 1 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 160050 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 227.308 chr2 165558362 165558618 + 1 NA intron (NM_001172173, intron 3 of 6) intron (NM_001172173, intron 3 of 6) -13846 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding 213.769 chr9 27086191 27086410 + 1 NA Intergenic AluSg|SINE|Alu -22841 NM_001290078 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding 153.923-8 chr3 126647204 126647409 + 1 NA intron (NM_001173513, intron 1 of 14) intron (NM_001173513, intron 1 of 14) 7818 NM_001173513 114112 Hs.477475 NM_052883 ENSG00000197763 TXNRD3 TGR|TR2|TR2IT1|TRXR3|TXNRD3IT1|TXNRD3NB|TXNRD3NT1 thioredoxin reductase 3 protein-coding 193.462-2 chr6 66138904 66139246 + 1 NA Intergenic LTR1D|LTR|ERV1 351196 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 269.923 chr5 14314147 14314626 + 1 NA intron (NM_007118, intron 8 of 56) MER20B|DNA|hAT-Charlie -149597 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA 203.846 chr14 65056738 65057030 + 1 NA intron (NM_002028, intron 11 of 11) MSTB2|LTR|ERVL-MaLR 12196 NR_039855 100616490 NR_039855 ENSG00000266531 MIR4706 mir-4706 microRNA 4706 ncRNA 184.538-2 chr2 146062544 146062738 + 1 NA Intergenic L1ME1|LINE|L1 -524416 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 172.308-2 chr2 230447677 230447916 + 1 NA intron (NM_001080391, intron 5 of 28) MER21C|LTR|ERVL 31040 NM_001206704 6672 Hs.369056 NM_003113 ENSG00000067066 SP100 lysp100b SP100 nuclear antigen protein-coding 157.769 chr12 41758230 41758420 + 1 NA Intergenic L1MC4a|LINE|L1 -5864 NR_135040 101927038 Hs.98588 NR_135040 ENSG00000257784 LINC02400 - long intergenic non-protein coding RNA 2400 ncRNA 210.692 chr10 63779129 63779418 + 1 NA Intergenic MamRep564|Unknown|Unknown -257383 NM_001318154 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 208.154 chr1 189118682 189119030 + 1 NA Intergenic Intergenic 1357154 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 240.308-2 chr8 67410117 67410661 + 1 NA intron (NR_136224, intron 1 of 4) intron (NR_136224, intron 1 of 4) 66555 NR_136224 102724708 Hs.636330 NR_136223 LOC102724708 - uncharacterized LOC102724708 ncRNA 241.615-2 chr8 125565820 125566300 + 1 NA Intergenic L1MEd|LINE|L1 133851 NM_001282985 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 235.923 chr8 107495361 107495815 + 1 NA intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) 2330 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding 183.154-2 chr10 109205000 109205382 + 1 NA Intergenic MIRc|SINE|MIR 718055 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 174.385-3 chr15 58397348 58397696 + 1 NA Intergenic Intergenic -34469 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding 221.308 chr20 14399728 14400036 + 1 NA intron (NM_001351663, intron 3 of 17) L1MEc|LINE|L1 -62215 NM_013281 23767 Hs.41296 NM_013281 ENSG00000125848 FLRT3 HH21 fibronectin leucine rich transmembrane protein 3 protein-coding 168.692-7 chr7 52811610 52811921 + 1 NA Intergenic L1MC3|LINE|L1 -223868 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 205.538 chr16 82649665 82650062 + 1 NA intron (NM_001220488, intron 2 of 14) MIR|SINE|MIR 22894 NM_001220490 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding 248.308 chr4 35643458 35643818 + 1 NA Intergenic MIR|SINE|MIR 600301 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 236.923 chr1 187656197 187656524 + 1 NA Intergenic Intergenic 212732 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 221.615-2 chr5 143936495 143936976 + 1 NA Intergenic L1MA2|LINE|L1 124574 NM_021182 57824 Hs.158320 NM_021182 ENSG00000158497 HMHB1 HB-1|HB-1Y|HLA-HB1 histocompatibility minor HB-1 protein-coding 161.615-3 chr10 71055423 71055649 + 1 NA Intergenic L1MC1|LINE|L1 116483 NR_134313 105378349 Hs.119164 NR_134313 ENSG00000259267 LINC02622 - long intergenic non-protein coding RNA 2622 ncRNA 240.462 chr14 19919296 19919942 + 1 NA promoter-TSS (NM_001005483) promoter-TSS (NM_001005483) -988 NM_001005483 79317 Hs.554585 NM_001005483 ENSG00000176281 OR4K5 OR14-16 olfactory receptor family 4 subfamily K member 5 protein-coding 166.077-6 chr7 54199582 54199795 + 1 NA Intergenic Intergenic -131009 NR_120516 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 165.692-7 chr4 41487282 41487588 + 1 NA intron (NM_001289122, intron 1 of 25) intron (NM_001289122, intron 1 of 25) -50722 NM_001330672 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding 230.385 chr20 17756023 17756503 + 1 NA Intergenic L2b|LINE|L2 56315 NM_178477 140836 Hs.115366 NM_178477 ENSG00000125888 BANF2 BAF-L|BAF2|BAFL|C20orf179 barrier to autointegration factor 2 protein-coding 169.538-9 chr5 55340277 55340500 + 1 NA intron (NM_015360, intron 6 of 26) intron (NM_015360, intron 6 of 26) 32399 NM_015360 23517 Hs.274531 NM_015360 ENSG00000039123 MTREX Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118 Mtr4 exosome RNA helicase protein-coding 171.154-7 chr5 162314839 162315064 + 1 NA Intergenic L1ME1|LINE|L1 247309 NM_000816 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 158.615-9 chr5 34776371 34776588 + 1 NA intron (NM_015577, intron 3 of 17) L1MA3|LINE|L1 -62685 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding 162.538-4 chr5 165548116 165548354 + 1 NA Intergenic L2c|LINE|L2 1077956 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA 206.692 chr10 522213 522429 + 1 NA intron (NM_014974, intron 1 of 36) L1MC1|LINE|L1 -106243 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA 183.538 chr11 26146475 26146796 + 1 NA Intergenic Intergenic -42488 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding 192.769-5 chr9 25454045 25454425 + 1 NA Intergenic Intergenic 224623 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 189.077-3 chr18 2284714 2285047 + 1 NA Intergenic Intergenic 286625 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 249.308-2 chr9 99696291 99696633 + 1 NA intron (NR_109802, intron 3 of 6) Tigger1|DNA|TcMar-Tigger 123427 NR_109802 101928438 Hs.637767 NR_109802 ENSG00000237461 LOC101928438 - uncharacterized LOC101928438 ncRNA 188.308-4 chr20 41068472 41068866 + 1 NA intron (NM_003286, intron 3 of 20) AluJo|SINE|Alu 39847 NM_003286 7150 Hs.472737 NM_003286 ENSG00000198900 TOP1 TOPI DNA topoisomerase I protein-coding 179.538-2 chr10 72445493 72445872 + 1 NA intron (NM_001195519, intron 3 of 6) MIRb|SINE|MIR 78304 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding 270.538 chr7 1379086 1379556 + 1 NA Intergenic (AGAT)n|Simple_repeat|Simple_repeat 80149 NM_182924 79778 Hs.376617 NM_024723 ENSG00000164877 MICALL2 JRAB|MICAL-L2 MICAL like 2 protein-coding 274.615 chr4 134946274 134946822 + 1 NA Intergenic MSTC|LTR|ERVL-MaLR 177011 NR_147187 105377439 Hs.570727 NR_147187 LINC02485 - long intergenic non-protein coding RNA 2485 ncRNA 190.231-2 chr2 189219103 189219343 + 1 NA Intergenic Arthur1|DNA|hAT-Tip100 -39462 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding 187.692-3 chr4 33043570 33043780 + 1 NA Intergenic Intergenic 692637 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 199.154-2 chr17 71884198 71884450 + 1 NA Intergenic Intergenic 141655 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 204.923 chr10 52487772 52488059 + 1 NA Intergenic Intergenic -17382 NR_120641 101928687 Hs.380362 NR_120641 ENSG00000231131 LNCAROD A-ROD|LINC01468|lnc-MBL2-4 lncRNA activating regulator of DKK1 ncRNA 153.692-2 chr19 39985625 39986002 + 1 NA Intergenic L1MA4A|LINE|L1 -11247 NM_178544 339327 Hs.125008 NM_178544 ENSG00000187187 ZNF546 ZNF49 zinc finger protein 546 protein-coding 153.846-11 chr9 72230528 72230753 + 1 NA intron (NM_001351573, intron 9 of 14) intron (NM_001351573, intron 9 of 14) -74796 NR_110952 100507540 Hs.54957 NR_110952 ENSG00000225434 LINC01504 - long intergenic non-protein coding RNA 1504 ncRNA 207.692-6 chr5 62878235 62878509 + 1 NA Intergenic L1ME4a|LINE|L1 299553 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 155.231 chr10 92607728 92608080 + 1 NA intron (NM_004523, intron 4 of 21) AluSx|SINE|Alu 14774 NM_004523 3832 Hs.8878 NM_004523 ENSG00000138160 KIF11 EG5|HKSP|KNSL1|MCLMR|TRIP5 kinesin family member 11 protein-coding 222.538 chr1 181555461 181555884 + 1 NA intron (NM_001205293, intron 3 of 47) intron (NM_001205293, intron 3 of 47) 72155 NM_001205293 777 Hs.437444 NM_000721 ENSG00000198216 CACNA1E BII|CACH6|CACNL1A6|Cav2.3|EIEE69|gm139 calcium voltage-gated channel subunit alpha1 E protein-coding 174.154-9 chr9 74349114 74349459 + 1 NA Intergenic L1ME1|LINE|L1 -22245 NR_121182 101927358 Hs.559523 NR_121182 ENSG00000227809 LOC101927358 - uncharacterized LOC101927358 ncRNA 331.769 chr6 45146426 45147154 + 1 NA intron (NM_001350325, intron 2 of 10) intron (NM_001350325, intron 2 of 10) 50980 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA 217.923-3 chr8 117962002 117962390 + 1 NA intron (NM_000127, intron 1 of 10) intron (NM_000127, intron 1 of 10) -41283 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA 176.385-4 chr9 111767744 111768069 + 1 NA intron (NM_173521, intron 3 of 25) L1MA4|LINE|L1 -8370 NM_001080551 158401 Hs.428209 NM_173521 ENSG00000165181 SHOC1 C9orf84|ZIP2|ZIP2H shortage in chiasmata 1 protein-coding 155.692-8 chr6 102137029 102137306 + 0.923077 NA Intergenic MSTB-int|LTR|ERVL-MaLR 738182 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 173.231-6 chr4 79436941 79437203 + 0.923077 NA Intergenic L1M5|LINE|L1 -28844 NM_033214 2712 Hs.98008 NM_033214 ENSG00000196475 GK2 GKP2|GKTA glycerol kinase 2 protein-coding 204.461 chr1 150626896 150627267 + 0.923077 NA TTS (NM_207168) TTS (NM_207168) 2052 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding 159.538-8 chr8 117400921 117401397 + 0.923077 NA Intergenic Intergenic -119554 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 207.769 chr7 77777127 77777403 + 0.923077 NA intron (NM_198467, intron 6 of 7) L1MEc|LINE|L1 21169 NM_032936 85025 Hs.19025 NM_032936 ENSG00000135211 TMEM60 C7orf35|DC32 transmembrane protein 60 protein-coding 188.692 chr1 51924284 51924672 + 0.923077 NA intron (NM_002867, intron 4 of 4) intron (NM_002867, intron 4 of 4) -45541 NM_002525 4898 Hs.584782 NM_002525 ENSG00000078618 NRDC NRD1|hNRD1|hNRD2 nardilysin convertase protein-coding 228.615 chr2 172091401 172091740 + 0.923077 NA Intergenic Intergenic 6063 NM_001038493 1745 Hs.407015 NM_178120 ENSG00000144355 DLX1 - distal-less homeobox 1 protein-coding 219 chr10 17241981 17242317 + 0.923077 NA Intergenic MLT1B|LTR|ERVL-MaLR -12164 NR_108061 100507347 Hs.740502 NR_108060 ENSG00000229124 VIM-AS1 - VIM antisense RNA 1 ncRNA 175.231-4 chr5 27906349 27906617 + 0.923077 NA Intergenic Intergenic 381182 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA 152.538-7 chrX 47689775 47690061 + 0.923077 NA Intergenic Intergenic -17273 NR_033924 392459 Hs.562045 NR_033924 ENSG00000187893 CXXC1P1 CXorf25|NCRNA00236 CXXC finger protein 1 pseudogene 1 pseudo 208.154-5 chr5 58548591 58548957 + 0.923077 NA intron (NR_109904, intron 1 of 3) MIR|SINE|MIR 9469 NR_109904 101928600 Hs.694699 NR_109904 ENSG00000250127 LINC02108 - long intergenic non-protein coding RNA 2108 ncRNA 201.231-2 chr2 104988151 104988458 + 0.923077 NA intron (NR_110603, intron 1 of 2) intron (NR_110603, intron 1 of 2) -49765 NM_182640 64965 Hs.590900 NM_182640 ENSG00000135972 MRPS9 MRP-S9|RPMS9|S9mt mitochondrial ribosomal protein S9 protein-coding 218.462-2 chr20 33572867 33573306 + 0.923077 NA intron (NM_001039709, intron 1 of 10) L2a|LINE|L2 10721 NM_001039709 9139 Hs.153934 NM_005093 ENSG00000078699 CBFA2T2 EHT|MTGR1|ZMYND3|p85 CBFA2/RUNX1 partner transcriptional co-repressor 2 protein-coding 358.615 chr8 137555365 137555999 + 0.923077 NA Intergenic L1M5|LINE|L1 -142094 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 197.231-3 chr4 60939741 60940017 + 0.923077 NA Intergenic OldhAT1|DNA|hAT-Ac 17260 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 156.923-16 chr3 196330590 196330839 + 0.923077 NA intron (NM_138461, intron 1 of 4) L1ME1|LINE|L1 7674 NM_001204897 116211 Hs.733264 NM_138461 ENSG00000145107 TM4SF19 OCTM4 transmembrane 4 L six family member 19 protein-coding 172.615-9 chr4 115564691 115565011 + 0.923077 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -451231 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding 269.538 chr3 88109839 88110229 + 0.923077 NA intron (NM_001350135, intron 2 of 6) intron (NM_001350135, intron 2 of 6) 39832 NM_001195308 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding 217.539 chr14 46691653 46692030 + 0.923077 NA Intergenic Intergenic -40060 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding 178 chr1 188455346 188455671 + 0.923077 NA Intergenic PRIMAX-int|LTR|ERV1 1011880 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 179.077-11 chr7 46307660 46307888 + 0.923077 NA Intergenic L1PB1|LINE|L1 -386502 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 193.538-2 chr11 4372546 4372936 + 0.923077 NA Intergenic L1MA8|LINE|L1 -4355 NM_001005161 143496 Hs.447463 NM_001005161 ENSG00000221996 OR52B4 OR11-3 olfactory receptor family 52 subfamily B member 4 (gene/pseudogene) protein-coding 166.462-4 chr5 137297225 137297506 + 0.923077 NA intron (NM_004598, intron 2 of 10) intron (NM_004598, intron 2 of 10) 169168 NR_134246 105379192 Hs.124611 NR_134246 LOC105379192 - uncharacterized LOC105379192 ncRNA 218.462-3 chr5 14172223 14172532 + 0.923077 NA intron (NM_007118, intron 1 of 56) intron (NM_007118, intron 1 of 56) 29035 NM_007118 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding 182.462 chr17 41138478 41138782 + 0.923077 NA TTS (NM_030976) TTS (NM_030976) 1857 NM_030976 81871 Hs.307014 NM_030976 ENSG00000198090 KRTAP4-6 KAP4.15|KAP4.6|KRTAP4-15|KRTAP4.15 keratin associated protein 4-6 protein-coding 169-7 chr4 123900764 123901184 + 0.923077 NA intron (NR_027105, intron 4 of 5) MER53|DNA|hAT 126710 NR_027106 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA 280.846 chr2 139381612 139382301 + 0.923077 NA Intergenic Intergenic 484632 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 202.154 chr1 216419950 216420319 + 0.923077 NA intron (NM_206933, intron 2 of 71) intron (NM_206933, intron 2 of 71) 3262 NM_007123 7399 Hs.655974 NM_007123 ENSG00000042781 USH2A RP39|US2|USH2|dJ1111A8.1 usherin protein-coding 172.615-2 chr13 73756096 73756469 + 0.923077 NA intron (NM_007249, intron 6 of 7) intron (NM_007249, intron 6 of 7) 192038 NR_047009 100874155 Hs.672679 NR_047009 LINC00392 - long intergenic non-protein coding RNA 392 ncRNA 202.846 chr15 94639567 94639977 + 0.923077 NA Intergenic L1M5|LINE|L1 -215591 NR_077061 440311 Hs.745156 NR_077061 ENSG00000277654 LOC440311 - NOP53 ribosome biogenesis factor pseudogene pseudo 207.308-5 chr8 90779251 90779687 + 0.923077 NA Intergenic AluJb|SINE|Alu -12306 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding 192.846 chr1 86868202 86868595 + 0.923077 NA intron (NR_144512, intron 3 of 4) intron (NR_144512, intron 3 of 4) 45728 NM_004261 9403 Hs.362728 NM_004261 ENSG00000183291 SELENOF SEP15 selenoprotein F protein-coding 198.692 chr2 61480674 61481022 + 0.923077 NA intron (NM_003400, intron 24 of 24) intron (NM_003400, intron 24 of 24) -9761 NM_014709 9736 Hs.644708 NM_014709 ENSG00000115464 USP34 - ubiquitin specific peptidase 34 protein-coding 172.462 chr10 83505182 83505497 + 0.923077 NA Intergenic L1MEc|LINE|L1 171750 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 247.692 chr19 27953670 27954192 + 0.923077 NA intron (NR_146733, intron 2 of 6) intron (NR_146733, intron 2 of 6) -159991 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA 166.539 chr18 32557277 32557547 + 0.923077 NA Intergenic L2|LINE|L2 45749 NR_003558 441818 Hs.549773 NR_003558 ENSG00000260389 WBP11P1 HsT3017 WW domain binding protein 11 pseudogene 1 pseudo 162.154 chr14 72879891 72880185 + 0.923077 NA intron (NM_001280543, intron 1 of 10) intron (NM_001280543, intron 1 of 10) 12611 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 248.385 chr6 55002459 55002802 + 0.923077 NA Intergenic L2a|LINE|L2 -103830 NM_001526 3062 Hs.151624 NM_001526 ENSG00000137252 HCRTR2 OX2R hypocretin receptor 2 protein-coding 245.846 chr2 54581327 54581694 + 0.923077 NA intron (NM_178313, intron 1 of 30) intron (NM_178313, intron 1 of 30) 23116 NM_178313 6711 Hs.503178 NM_003128 ENSG00000115306 SPTBN1 ELF|HEL102|SPTB2|betaSpII spectrin beta, non-erythrocytic 1 protein-coding 181.154-7 chr5 141165872 141166453 + 0.923077 NA Intergenic Intergenic -6482 NM_018940 56129 Hs.203830 NM_018940 ENSG00000113212 PCDHB7 PCDH-BETA7 protocadherin beta 7 protein-coding 202.538-3 chr3 143131787 143132063 + 0.923077 NA Intergenic MLT1J|LTR|ERVL-MaLR 12154 NM_004267 9435 Hs.8786 NM_004267 ENSG00000175040 CHST2 C6ST|GST-2|GST2|Gn6ST-1|HEL-S-75|glcNAc6ST-1 carbohydrate sulfotransferase 2 protein-coding 204.231-5 chr5 7116859 7117202 + 0.923077 NA Intergenic L1PA15|LINE|L1 152324 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 215.231-4 chr5 84370318 84370893 + 0.923077 NA intron (NM_001278642, intron 1 of 9) intron (NM_001278642, intron 1 of 9) 14262 NM_001278642 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 178.538 chr2 143634432 143634836 + 0.923077 NA intron (NM_018460, intron 12 of 13) intron (NM_018460, intron 12 of 13) -302433 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 196.923-2 chr3 139361378 139361700 + 0.923077 NA intron (NR_023350, intron 16 of 21) intron (NR_023350, intron 16 of 21) 16988 NM_001363857 56945 Hs.745001 NM_020191 ENSG00000175110 MRPS22 C3orf5|COXPD5|GIBT|GK002|MRP-S22|ODG7|RPMS22 mitochondrial ribosomal protein S22 protein-coding 152.539-4 chr8 120853308 120853536 + 0.923077 NA Intergenic THE1D-int|LTR|ERVL-MaLR -41376 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 154.154-18 chr6 46099905 46100166 + 0.923077 NA intron (NM_001370650, intron 1 of 6) intron (NM_001370650, intron 1 of 6) -19687 NM_001114086 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding 228.462 chr5 58821875 58822321 + 0.923077 NA intron (NM_138453, intron 3 of 4) intron (NM_138453, intron 3 of 4) 177800 NM_001197223 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 164.923-10 chr8 20100713 20101011 + 0.923077 NA Intergenic Intergenic 82274 NM_001142324 6570 Hs.158322 NM_003053 ENSG00000036565 SLC18A1 CGAT|VAT1|VMAT1 solute carrier family 18 member A1 protein-coding 167.077-6 chr3 102774597 102774785 + 0.923077 NA Intergenic Intergenic 339676 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 232.154-3 chr8 115898064 115898361 + 0.923077 NA Intergenic Intergenic -229237 NM_001282903 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 167.692-5 chr4 47886167 47886364 + 0.923077 NA intron (NR_103795, intron 12 of 23) L1ME3|LINE|L1 -27962 NR_125879 101927157 Hs.134190 NR_125879 LOC101927157 - uncharacterized LOC101927157 ncRNA 160-5 chr3 5828697 5829021 + 0.923077 NA Intergenic Intergenic -578604 NR_039953 100616334 NR_039953 ENSG00000265180 MIR4790 - microRNA 4790 ncRNA 336.923 chr2 163412040 163412641 + 0.923077 NA Intergenic Intergenic 323668 NM_001321825 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding 215.308-3 chr8 99905151 99905446 + 0.923077 NA Intergenic UCON4|Unknown|Unknown -11591 NM_004374 1345 Hs.351875 NM_004374 ENSG00000164919 COX6C - cytochrome c oxidase subunit 6C protein-coding 202.769-5 chr4 170884531 170884933 + 0.923077 NA Intergenic Intergenic -140997 NR_134683 100506107 Hs.380602 NR_134683 ENSG00000250968 LINC02382 - long intergenic non-protein coding RNA 2382 ncRNA 202.154-3 chr11 18295590 18295871 + 0.923077 NA intron (NM_181507, intron 13 of 22) intron (NM_181507, intron 13 of 22) 26410 NM_007216 11234 Hs.437599 NM_007216 ENSG00000110756 HPS5 AIBP63|BLOC2S2 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 protein-coding 161.154-6 chr6 51902237 51902456 + 0.923077 NA intron (NM_138694, intron 43 of 66) intron (NM_138694, intron 43 of 66) 185267 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding 184.154-5 chr3 20848642 20848877 + 0.923077 NA Intergenic Intergenic 506291 NR_110814 101927829 Hs.639381 NR_110814 ENSG00000231304 LOC101927829 - uncharacterized LOC101927829 ncRNA 172.846 chr14 50650326 50650646 + 0.923077 NA intron (NM_021818, intron 2 of 4) MLT1F|LTR|ERVL-MaLR 17820 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding 201.846 chr1 102373962 102374288 + 0.923077 NA Intergenic Intergenic -376891 NM_058170 118427 Hs.484475 NM_058170 ENSG00000118733 OLFM3 NOE3|NOELIN3|OPTIMEDIN olfactomedin 3 protein-coding 166.077-5 chr5 20220862 20221107 + 0.923077 NA intron (NM_001291956, intron 2 of 14) L1MA3|LINE|L1 -84567 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA 202.846-2 chr2 22767367 22767890 + 0.923077 NA Intergenic L1MEf|LINE|L1 231149 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 294.231 chr10 118717149 118717688 + 0.923077 NA intron (NM_153810, intron 3 of 8) intron (NM_153810, intron 3 of 8) 37552 NM_153810 143384 Hs.420024 NM_153810 ENSG00000151893 CACUL1 C10orf46|CAC1 CDK2 associated cullin domain 1 protein-coding 157.846-4 chr1 222766154 222766468 + 0.923077 NA Intergenic AluSz6|SINE|Alu 26627 NM_001324080 400823 Hs.697608 NM_207468 ENSG00000197520 FAM177B - family with sequence similarity 177 member B protein-coding 177.231-10 chrX 86157855 86158155 + 0.923077 NA intron (NM_001139514, intron 1 of 11) intron (NM_001139514, intron 1 of 11) 9554 NM_001139514 117154 Hs.86603 NM_053281 ENSG00000126733 DACH2 - dachshund family transcription factor 2 protein-coding 224.923 chr11 86467213 86467642 + 0.923077 NA intron (NM_001014811, intron 6 of 13) intron (NM_001014811, intron 6 of 13) 92540 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding 173.769 chr1 162183232 162183566 + 0.923077 NA intron (NM_014697, intron 2 of 9) Tigger1|DNA|TcMar-Tigger 26292 NR_039798 100616386 NR_039798 ENSG00000266144 MIR4654 mir-4654 microRNA 4654 ncRNA 177.385-2 chr10 85017143 85017460 + 0.923077 NA Intergenic L1MA7|LINE|L1 181604 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 260.462 chr2 115756214 115756554 + 0.923077 NA intron (NM_001321907, intron 10 of 23) L1MA5|LINE|L1 412569 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 222.923-2 chr4 30956105 30956611 + 0.923077 NA intron (NM_001173523, intron 2 of 2) intron (NM_001173523, intron 2 of 2) -214786 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 220.615 chr10 73467909 73468263 + 0.923077 NA intron (NM_001142353, intron 8 of 13) intron (NM_001142353, intron 8 of 13) -27666 NR_132104 101929145 Hs.434502 NR_132103 ENSG00000221817 PPP3CB-AS1 USP54-AS1 PPP3CB antisense RNA 1 (head to head) ncRNA 177.231-8 chr8 117527790 117528001 + 0.923077 NA intron (NM_001282986, intron 1 of 2) intron (NM_001282986, intron 1 of 2) 7182 NM_080651 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 201.077 chr14 70737240 70737598 + 0.923077 NA intron (NM_033141, intron 8 of 12) MIR|SINE|MIR 38721 NR_125769 103695436 Hs.572296 NR_125769 ENSG00000258689 LINC01269 - long intergenic non-protein coding RNA 1269 ncRNA 182.769-7 chr21 24007721 24007984 + 0.923077 NA Intergenic Intergenic 313525 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA 163.231-7 chr5 156295039 156295242 + 0.923077 NA Intergenic L1MB3|LINE|L1 -31617 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding 210.615-2 chr5 148461830 148462203 + 0.923077 NA intron (NM_001040169, intron 5 of 5) L1MC1|LINE|L1 78058 NM_205836 81545 Hs.483772 NM_030793 ENSG00000145868 FBXO38 Fbx38|HMN2D|MOKA|SP329 F-box protein 38 protein-coding 269.462 chr10 63224182 63224663 + 0.923077 NA intron (NM_001322252, intron 2 of 24) intron (NM_001322252, intron 2 of 24) 44801 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 157.077-9 chr22 33940489 33940763 + 0.923077 NA Intergenic Intergenic -17738 NM_001362953 9215 Hs.474667 NM_004737 ENSG00000133424 LARGE1 LARGE|MDC1D|MDDGA6|MDDGB6 LARGE xylosyl- and glucuronyltransferase 1 protein-coding 166.846 chr12 45515347 45515624 + 0.923077 NA Intergenic L1MC4|LINE|L1 212436 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA 178.077-3 chr17 63033655 63033982 + 0.923077 NA intron (NM_025185, intron 2 of 25) L2b|LINE|L2 67583 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 216.923-7 chr6 51874125 51874446 + 0.923077 NA intron (NM_138694, intron 46 of 66) MER94|DNA|hAT-Blackjack 213328 NM_138694 5314 Hs.662050 NM_138694 ENSG00000170927 PKHD1 ARPKD|FCYT|FPC|PKD4|TIGM1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin protein-coding 167.385-5 chr3 131357690 131357953 + 0.923077 NA intron (NR_038976, intron 2 of 3) MER5B|DNA|hAT-Charlie -4024 NR_002949 152195 Hs.380350 NM_194289 ENSG00000246082 NUDT16P1 NUDT16P nudix hydrolase 16 pseudogene 1 pseudo 183.385 chr2 113710313 113710558 + 0.923077 NA non-coding (NR_104470, exon 17 of 17) non-coding (NR_104470, exon 17 of 17) 10933 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA 242.077 chr2 155631790 155632195 + 0.923077 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 622939 NR_110249 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 232.308 chr4 93027785 93028184 + 0.923077 NA intron (NM_001286838, intron 2 of 14) intron (NM_001286838, intron 2 of 14) 723585 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding 234.462-2 chr6 102955216 102955516 + 0.923077 NA Intergenic (ATCTTCT)n|Simple_repeat|Simple_repeat 1556381 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 189.077-2 chr13 102676716 102677093 + 0.923077 NA intron (NM_001330588, intron 29 of 29) intron (NM_001330588, intron 29 of 29) 17617 NM_001010977 196541 Hs.508623 NM_001010977 ENSG00000139780 METTL21C C13orf39 methyltransferase like 21C protein-coding 271.077 chr2 63005619 63006154 + 0.923077 NA intron (NM_001142615, intron 19 of 22) intron (NM_001142615, intron 19 of 22) 41825 NR_027069 100132215 Hs.656781 NR_027069 ENSG00000231609 LOC100132215 - uncharacterized LOC100132215 ncRNA 284.615 chr4 132876038 132876570 + 0.923077 NA Intergenic L1MA2|LINE|L1 272812 NR_125885 101927359 Hs.649960 NR_125885 ENSG00000250241 LOC101927359 - uncharacterized LOC101927359 ncRNA 177.692-2 chr11 22669260 22669478 + 0.923077 NA intron (NM_177553, intron 1 of 7) intron (NM_177553, intron 1 of 7) 1261 NM_177553 2620 Hs.711297 NM_005256 ENSG00000148935 GAS2 GAS-2 growth arrest specific 2 protein-coding 159.769-6 chr3 47271180 47271514 + 0.923077 NA exon (NM_182902, exon 5 of 21) exon (NM_182902, exon 5 of 21) 11452 NM_001134878 64147 Hs.373947 NM_022342 ENSG00000088727 KIF9 - kinesin family member 9 protein-coding 164-2 chr16 72678363 72678618 + 0.923077 NA Intergenic L1MB4|LINE|L1 -13520 NR_159371 101927957 Hs.637253 NR_126330 ENSG00000261008 LINC01572 - long intergenic non-protein coding RNA 1572 ncRNA 178.308-3 chr7 66203026 66203442 + 0.923077 NA Intergenic Intergenic -2100 NM_003596 8460 Hs.421194 NM_003596 ENSG00000169902 TPST1 TANGO13A tyrosylprotein sulfotransferase 1 protein-coding 173.923-5 chr5 125704689 125705197 + 0.923077 NA Intergenic L1M4|LINE|L1 211682 NR_109887 101927460 Hs.407582 NR_109887 ENSG00000260192 LINC02240 - long intergenic non-protein coding RNA 2240 ncRNA 168.615-7 chr6 147390846 147391037 + 0.923077 NA TTS (NM_001127715) TTS (NM_001127715) -117749 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 156.231 chr11 42233665 42233868 + 0.923077 NA intron (NR_038309, intron 4 of 5) intron (NR_038309, intron 4 of 5) 19924 NR_038309 100507205 Hs.99310 NR_038309 LINC02740 - long intergenic non-protein coding RNA 2740 ncRNA 170.538-3 chr12 89301218 89301530 + 0.923077 NA Intergenic L1ME3B|LINE|L1 51127 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 208.923-2 chr2 44899780 44900097 + 0.923077 NA Intergenic MIRc|SINE|MIR 38950 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA 202.769-2 chr18 50957356 50957613 + 0.923077 NA Intergenic LTR82A|LTR|ERVL -10556 NM_018696 55520 Hs.657360 NM_018696 ENSG00000141642 ELAC1 D29 elaC ribonuclease Z 1 protein-coding 245.385 chr15 38841413 38841913 + 0.923077 NA Intergenic AluY|SINE|Alu 145065 NR_160786 226.615-2 chr11 5558799 5559222 + 0.923077 NA Intergenic L1PA13|LINE|L1 -13487 NM_001005289 390067 Hs.554540 NM_001005289 ENSG00000181616 OR52H1 OR11-41|OR11-45 olfactory receptor family 52 subfamily H member 1 protein-coding 189-5 chr6 74194494 74194808 + 0.923077 NA intron (NR_110856, intron 1 of 3) L1PREC2|LINE|L1 125200 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 170.692-3 chr2 229222118 229222487 + 0.923077 NA intron (NM_001100818, intron 1 of 2) L1ME4c|LINE|L1 9790 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 207 chr9 27603604 27604117 + 0.923077 NA Intergenic Intergenic -29994 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 194.308-3 chr17 30021951 30022387 + 0.923077 NA intron (NR_026738, intron 7 of 15) intron (NR_026738, intron 7 of 15) 80535 NR_026738 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding 236.539 chr8 126538359 126538824 + 0.923077 NA Intergenic MIRc|SINE|MIR 19887 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 197.538 chr16 82107619 82108151 + 0.923077 NA Intergenic Intergenic 62339 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 161.385-3 chr3 156609390 156609644 + 0.923077 NA Intergenic ORSL-2b|DNA|hAT-Tip100 -54317 NM_001308197 6747 Hs.518346 NM_007107 ENSG00000114850 SSR3 TRAPG signal sequence receptor subunit 3 protein-coding 193.615-2 chr3 96010506 96010771 + 0.923077 NA Intergenic Intergenic -327445 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 177.231-2 chr17 73234752 73235113 + 0.923077 NA intron (NR_110105, intron 2 of 4) intron (NR_110105, intron 2 of 4) 2271 NM_001351265 55028 Hs.12929 NM_017941 ENSG00000141219 C17orf80 HLC-8|MIG3|SPEP1 chromosome 17 open reading frame 80 protein-coding 219.308 chr3 35740420 35740722 + 0.923077 NA intron (NM_016300, intron 17 of 19) intron (NM_016300, intron 17 of 19) -3905 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA 216-2 chr7 43525011 43525457 + 0.923077 NA intron (NM_001287059, intron 22 of 27) intron (NM_001287059, intron 22 of 27) -2692 NR_038276 100506895 Hs.676047 NR_038276 ENSG00000231638 LUARIS SCAT6|lncRNA32 lncRNA upregulator of antiviral response interferon signaling ncRNA 167.538-10 chr7 14190434 14190638 + 0.923077 NA intron (NM_001350717, intron 22 of 24) L1MA6|LINE|L1 -199111 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding 195.692-7 chr8 120259868 120260257 + 0.923077 NA intron (NM_021110, intron 23 of 47) Charlie21a|DNA|hAT-Charlie 134960 NM_021110 7373 Hs.409662 NM_021110 ENSG00000187955 COL14A1 UND collagen type XIV alpha 1 chain protein-coding 164.077-3 chr6 17214326 17214509 + 0.923077 NA Intergenic MIR|SINE|MIR -66944 NM_001143942 221662 Hs.519904 NM_153020 ENSG00000112183 RBM24 RNPC6|dJ259A10.1 RNA binding motif protein 24 protein-coding 194.923 chr6 120185053 120185284 + 0.923077 NA Intergenic L1MA7|LINE|L1 169989 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA 168.615-6 chr6 84400954 84401280 + 0.923077 NA Intergenic MIR|SINE|MIR 73812 NR_132100 105377880 Hs.171384 NR_132100 ENSG00000231776 LINC01611 TCONS_l2_00025430 long intergenic non-protein coding RNA 1611 ncRNA 187.692-5 chr5 27257255 27257685 + 0.923077 NA Intergenic MIR3|SINE|MIR -214822 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA 204.615-4 chr8 101900722 101900977 + 0.923077 NA intron (NM_001040624, intron 4 of 7) L1MD2|LINE|L1 -83583 NR_126152 104054148 Hs.683917 NR_126152 LOC104054148 - uncharacterized LOC104054148 ncRNA 187.615-2 chr2 166016207 166016460 + 0.923077 NA intron (NR_110598, intron 2 of 3) intron (NR_110598, intron 2 of 3) 58915 NR_110598 102724058 Hs.570269 NR_110598 ENSG00000236107 LOC102724058 - uncharacterized LOC102724058 ncRNA 216.308 chr4 76468239 76468602 + 0.923077 NA intron (NM_020859, intron 1 of 10) L1ME4b|LINE|L1 33191 NM_020859 57619 Hs.683808 NM_020859 ENSG00000138771 SHROOM3 APXL3|MSTP013|SHRM|ShrmL shroom family member 3 protein-coding 215.231-2 chr14 81867019 81867426 + 0.923077 NA Intergenic MIR|SINE|MIR -124084 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 255.692-2 chr6 63143420 63144075 + 0.923077 NA Intergenic L1M1|LINE|L1 176230 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding 200.615-4 chr4 83045677 83045943 + 0.923077 NA intron (NM_001258006, intron 2 of 8) intron (NM_001258006, intron 2 of 8) 10627 NM_001258006 51138 Hs.190384 NM_016129 ENSG00000138663 COPS4 CSN4|SGN4 COP9 signalosome subunit 4 protein-coding 165.692-8 chr4 55069804 55070173 + 0.923077 NA Intergenic FLAM_C|SINE|Alu 55607 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding 174.231 chr1 33681242 33681476 + 0.923077 NA intron (NM_052896, intron 25 of 69) L1M6|LINE|L1 -179116 NM_145205 127540 Hs.568628 NM_145205 ENSG00000176256 HMGB4 dJ1007G16.5 high mobility group box 4 protein-coding 175.154-4 chr11 79174255 79174454 + 0.923077 NA intron (NM_001098816, intron 3 of 33) intron (NM_001098816, intron 3 of 33) 227755 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA 166.154-8 chr5 27545628 27546061 + 0.923077 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 73552 NR_038848 643401 Hs.533212 NR_038848 ENSG00000250337 PURPL LINC01021 p53 upregulated regulator of p53 levels ncRNA 194.538-2 chr6 18690310 18690828 + 0.923077 NA intron (NR_149116, intron 6 of 7) intron (NR_149116, intron 6 of 7) 118785 NR_030312 693125 NR_030312 ENSG00000207775 MIR548A1 MIRN548A1 microRNA 548a-1 ncRNA 192.308-5 chr3 192088304 192088579 + 0.923077 NA Intergenic Intergenic -150189 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 173.538-7 chr4 96543196 96543616 + 0.923077 NA intron (NR_147149, intron 2 of 3) intron (NR_147149, intron 2 of 3) 232703 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA 208.231 chr1 112053742 112054196 + 0.923077 NA Intergenic L1MC4|LINE|L1 63433 NR_145438 643355 Hs.279714 NR_145438 ENSG00000231437 LINC01750 - long intergenic non-protein coding RNA 1750 ncRNA 224.538 chr14 66999756 67000126 + 0.923077 NA intron (NM_001024218, intron 8 of 21) intron (NM_001024218, intron 8 of 21) -189499 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 169.077-3 chr2 60534385 60534705 + 0.923077 NA intron (NM_138559, intron 2 of 4) intron (NM_138559, intron 2 of 4) 18953 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding 163.846-14 chr7 82971562 82971780 + 0.923077 NA intron (NM_033026, intron 3 of 24) intron (NM_033026, intron 3 of 24) 191213 NM_033026 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding 178.308-2 chr21 27245964 27246306 + 0.923077 NA Intergenic Intergenic -279047 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 188.308-8 chr7 108078206 108078607 + 0.923077 NA intron (NM_001318048, intron 15 of 17) intron (NM_001318048, intron 15 of 17) 51955 NM_001318046 22798 Hs.62022 NM_007356 ENSG00000091128 LAMB4 - laminin subunit beta 4 protein-coding 176.923-2 chr13 84382134 84382465 + 0.923077 NA intron (NR_046871, intron 3 of 6) intron (NR_046871, intron 3 of 6) 241697 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA 172.154 chr1 96014608 96014885 + 0.923077 NA intron (NR_125991, intron 4 of 4) intron (NR_125991, intron 4 of 4) 22678 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA 204.692 chr2 75578014 75578283 + 0.923077 NA Intergenic MLT1A0|LTR|ERVL-MaLR -8429 NM_032181 84141 Hs.302346 NM_032181 ENSG00000115363 EVA1A FAM176A|TMEM166 eva-1 homolog A, regulator of programmed cell death protein-coding 172.462-3 chr3 198024750 198025135 + 0.923077 NA intron (NR_026786, intron 15 of 16) intron (NR_026786, intron 15 of 16) 14525 NR_046669 100873947 Hs.637166 NR_046669 ENSG00000232832 LMLN-AS1 - LMLN antisense RNA 1 ncRNA 171.692-8 chr6 54552736 54553082 + 0.923077 NA Intergenic L1PREC2|LINE|L1 244468 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding 197.077 chr10 19315785 19316102 + 0.923077 NA intron (NM_001142308, intron 21 of 39) intron (NM_001142308, intron 21 of 39) 267142 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding 176.846-5 chr5 81600724 81601098 + 0.923077 NA intron (NM_012446, intron 4 of 16) intron (NM_012446, intron 4 of 16) 150342 NM_001256733 23635 Hs.102735 NM_012446 ENSG00000145687 SSBP2 HSPC116|SOSS-B2 single stranded DNA binding protein 2 protein-coding 205.231-5 chrX 98611724 98612073 + 0.923077 NA Intergenic Intergenic -1047363 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA 167.538-7 chr2 236609176 236609409 + 0.923077 NA Intergenic Intergenic 39467 NM_020311 57007 Hs.471751 NM_020311 ENSG00000144476 ACKR3 CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1 atypical chemokine receptor 3 protein-coding 205.077-2 chr3 59557796 59558153 + 0.923077 NA Intergenic Intergenic 100523 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 175.077 chr12 45362974 45363266 + 0.923077 NA intron (NM_001025356, intron 8 of 19) Tigger4a|DNA|TcMar-Tigger 70430 NM_001142678 196527 Hs.505339 NM_001025356 ENSG00000177119 ANO6 BDPLT7|SCTS|TMEM16F anoctamin 6 protein-coding 226.231 chr5 25283393 25283821 + 0.923077 NA intron (NR_136209, intron 1 of 3) L1MEg|LINE|L1 92654 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 203-2 chr8 81628100 81628695 + 0.923077 NA intron (NR_146081, intron 1 of 7) intron (NR_146081, intron 1 of 7) 2880 NR_146081 650747 NR_146081 IMPA1P1 IMPA1P inositol monophosphatase 1 pseudogene 1 pseudo 186.154-2 chr22 32724385 32724749 + 0.923077 NA intron (NM_003490, intron 6 of 13) MIR|SINE|MIR -76249 NM_000362 7078 Hs.644633 NM_000362 ENSG00000100234 TIMP3 HSMRK222|K222|K222TA2|SFD TIMP metallopeptidase inhibitor 3 protein-coding 195.692-2 chr3 38794418 38794780 + 0.923077 NA promoter-TSS (NM_001293306) promoter-TSS (NM_001293306) -589 NM_006514 6336 Hs.250443 NM_006514 ENSG00000185313 SCN10A FEPS2|Nav1.8|PN3|SNS|hPN3 sodium voltage-gated channel alpha subunit 10 protein-coding 193.538-3 chr11 27619253 27619695 + 0.923077 NA intron (NR_102708, intron 2 of 3) MLT2C2|LTR|ERVL 15153 NR_102708 101410541 Hs.471439 NR_102708 ENSG00000254934 LINC00678 - long intergenic non-protein coding RNA 678 ncRNA 165.231-10 chr3 133781387 133781667 + 0.923077 NA 3' UTR (NM_001354703, exon 23 of 23) 3' UTR (NM_001354703, exon 23 of 23) -2496 NM_021203 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding 211.077-2 chr1 180838177 180838604 + 0.923077 NA 3' UTR (NM_001328662, exon 11 of 11) 3' UTR (NM_001328662, exon 11 of 11) -74507 NM_020950 57710 Hs.734816 NM_020950 ENSG00000135835 KIAA1614 - KIAA1614 protein-coding 211.231-2 chr6 38459664 38460130 + 0.923077 NA intron (NM_001172418, intron 5 of 10) MamRTE1|LINE|RTE-BovB -21699 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 162.462-3 chr14 58734625 58734810 + 0.923077 NA Intergenic AluJb|SINE|Alu -93571 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA 211.692 chr1 233197839 233198302 + 0.923077 NA intron (NM_014801, intron 15 of 33) HAL1|LINE|L1 97655 NM_014801 80003 Hs.370605 NM_014801 ENSG00000135749 PCNX2 PCNXL2 pecanex 2 protein-coding 246.538 chr7 122185673 122185990 + 0.923077 NA Intergenic L1MA2|LINE|L1 -41582 NM_005763 10157 Hs.156738 NM_005763 ENSG00000008311 AASS LKR/SDH|LKRSDH|LORSDH aminoadipate-semialdehyde synthase protein-coding 158.385-2 chr22 42442632 42442914 + 0.923077 NA Intergenic Arthur1B|DNA|hAT-Tip100 -4787 NM_001371362 204.077 chr14 26393683 26393959 + 0.923077 NA Intergenic Intergenic 159609 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding 173.231-3 chr17 39933871 39934251 + 0.923077 NA Intergenic Intergenic -6460 NM_139280 94103 Hs.514151 NM_016471 ENSG00000172057 ORMDL3 - ORMDL sphingolipid biosynthesis regulator 3 protein-coding 158.462-5 chr18 2751877 2752433 + 0.923077 NA intron (NM_015295, intron 33 of 47) intron (NM_015295, intron 33 of 47) -94851 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding 160.846-8 chr7 34286247 34286449 + 0.923077 NA Intergenic L2b|LINE|L2 -371870 NM_207172 387129 Hs.652373 NM_207172 ENSG00000187258 NPSR1 ASRT2|GPR154|GPRA|NPSR|PGR14|VRR1 neuropeptide S receptor 1 protein-coding 263.846 chr17 53701289 53701913 + 0.923077 NA Intergenic Intergenic -121326 NM_032559 84643 Hs.226805 NM_032559 ENSG00000141200 KIF2B - kinesin family member 2B protein-coding 220.615-3 chr16 24424302 24424842 + 0.923077 NA Intergenic Intergenic -114994 NM_018703 5930 Hs.188553 NM_006910 ENSG00000122257 RBBP6 MY038|P2P-R|PACT|RBQ-1|SNAMA RB binding protein 6, ubiquitin ligase protein-coding 190.154-10 chr7 8253485 8253839 + 0.923077 NA intron (NM_001350826, intron 1 of 14) MER8|DNA|TcMar-Tigger 8390 NM_001350825 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding 203.077-2 chr2 102593222 102593680 + 0.923077 NA Intergenic Intergenic -26102 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding 155.308-4 chr16 13114572 13114820 + 0.923077 NA intron (NM_001145204, intron 2 of 4) L1ME3Cz|LINE|L1 213098 NM_001145205 729993 Hs.130661 NM_001145204 ENSG00000237515 SHISA9 CKAMP44 shisa family member 9 protein-coding 239.385 chr1 43869028 43869798 + 0.923077 NA intron (NR_073021, intron 6 of 9) intron (NR_073021, intron 6 of 9) 30791 NR_106727 102464830 NR_106727 ENSG00000283477 MIR6079 hsa-mir-6079 microRNA 6079 ncRNA 378.923 chr7 93852341 93853198 + 0.923077 NA Intergenic L1ME1|LINE|L1 37984 NM_001271003 7980 Hs.438231 NM_006528 ENSG00000105825 TFPI2 PP5|REF1|TFPI-2 tissue factor pathway inhibitor 2 protein-coding 248.769-2 chr5 38840035 38840552 + 0.923077 NA intron (NR_109951, intron 1 of 3) L1MEf|LINE|L1 5536 NR_109951 101929768 Hs.546623 NR_109951 OSMR-AS1 CTD-2127H9.1 OSMR antisense RNA 1 (head to head) ncRNA 169.846-2 chr1 65901842 65902054 + 0.923077 NA intron (NM_002600, intron 1 of 16) L1PA16|LINE|L1 -11297 NM_001297441 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding 160.154-14 chr7 107956339 107956581 + 0.923077 NA intron (NM_002291, intron 20 of 33) LTR79|LTR|ERVL 46701 NM_002291 3912 Hs.650585 NM_002291 ENSG00000091136 LAMB1 CLM|LIS5 laminin subunit beta 1 protein-coding 179.077-5 chr14 77774863 77775108 + 0.923077 NA Intergenic MIR|SINE|MIR -13829 NM_001318844 22938 Hs.445498 NM_012245 ENSG00000100603 SNW1 Bx42|FUN20|NCOA-62|PRPF45|Prp45|SKIIP|SKIP|SKIP1 SNW domain containing 1 protein-coding 193.615-3 chr4 171513027 171513428 + 0.923077 NA Intergenic Intergenic 125536 NR_147157 105377536 Hs.550719 NR_147157 ENSG00000249297 LINC02174 - long intergenic non-protein coding RNA 2174 ncRNA 250.923-2 chr5 44810549 44811011 + 0.923077 NA intron (NM_016640, intron 1 of 4) intron (NM_016640, intron 1 of 4) 1833 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 155.077-6 chr11 104975670 104975997 + 0.923077 NA Intergenic Intergenic -7259 NM_001225 837 Hs.138378 NM_001225 ENSG00000196954 CASP4 ICE(rel)II|ICEREL-II|ICH-2|Mih1|Mih1/TX|TX caspase 4 protein-coding 182.154-6 chr2 56346104 56346405 + 0.923077 NA intron (NM_001348515, intron 3 of 3) intron (NM_001348515, intron 3 of 3) -160484 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 192.769-4 chr8 143398016 143398296 + 0.923077 NA Intergenic Intergenic -19523 NR_126358 104326051 Hs.202140 NR_126358 ENSG00000254338 MAFA-AS1 TCONS_00014882 MAFA antisense RNA 1 ncRNA 157.615 chr11 30165986 30166224 + 0.923077 NA Intergenic Intergenic -64909 NM_000510 2488 Hs.36975 NM_000510 ENSG00000131808 FSHB HH24 follicle stimulating hormone subunit beta protein-coding 179.923-2 chr6 144984018 144984248 + 0.923077 NA Intergenic L1MA7|LINE|L1 578478 NR_132778 106635530 NR_132778 SNORA98 - small nucleolar RNA, H/ACA box 98 snoRNA 207.231-4 chr15 80096127 80096445 + 0.923077 NA intron (NM_001242912, intron 2 of 6) L3b|LINE|CR1 -2130 NM_001242919 54469 Hs.596679 NM_019006 ENSG00000086666 ZFAND6 AWP1|ZA20D3|ZFAND5B zinc finger AN1-type containing 6 protein-coding 204.308-2 chr2 198274131 198274456 + 0.923077 NA Intergenic Intergenic 100804 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA 307.692 chr8 126402503 126403012 + 0.923077 NA Intergenic MER44A|DNA|TcMar-Tigger 77262 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 176.769 chr1 154176359 154176641 + 0.923077 NA intron (NM_152263, intron 2 of 9) intron (NM_152263, intron 2 of 9) 1704 NM_001278191 7170 Hs.535581 NM_152263 ENSG00000143549 TPM3 CAPM1|CFTD|HEL-189|HEL-S-82p|NEM1|OK/SW-cl.5|TM-5|TM3|TM30|TM30nm|TM5|TPM3nu|TPMsk3|TRK|hscp30 tropomyosin 3 protein-coding 170.538 chr10 31125712 31126096 + 0.923077 NA Intergenic Charlie13a|DNA|hAT-Charlie -61979 NR_134478 101929352 Hs.209289 NR_134478 LINC02664 - long intergenic non-protein coding RNA 2664 ncRNA 224.615 chr11 61615948 61616273 + 0.923077 NA intron (NR_002775, intron 1 of 4) Zaphod|DNA|hAT-Tip100 1074 NR_002775 113157 Hs.502733 NR_002775 ENSG00000243742 RPLP0P2 RPLP0L2|RPLP0_3_1146 ribosomal protein lateral stalk subunit P0 pseudogene 2 pseudo 183.231 chr1 18528174 18528685 + 0.923077 NA Intergenic AluJb|SINE|Alu 47499 NM_152375 127707 Hs.406913 NM_152375 ENSG00000179023 KLHDC7A - kelch domain containing 7A protein-coding 217.154-3 chr2 24345018 24345455 + 0.923077 NA intron (NM_001348182, intron 1 of 38) intron (NM_001348182, intron 1 of 38) 15300 NM_001348185 50618 Hs.432562 NM_006277 ENSG00000198399 ITSN2 PRO2015|SH3D1B|SH3P18|SWA|SWAP intersectin 2 protein-coding 217.231-4 chr7 113943149 113943477 + 0.923077 NA Intergenic L1ME3A|LINE|L1 -24304 NM_002711 5506 Hs.458309 NM_002711 ENSG00000154415 PPP1R3A GM|PP1G|PPP1R3 protein phosphatase 1 regulatory subunit 3A protein-coding 160.692-3 chr18 63415704 63416058 + 0.923077 NA intron (NM_004869, intron 1 of 10) intron (NM_004869, intron 1 of 10) 6595 NM_004869 9525 Hs.126550 NM_004869 ENSG00000119541 VPS4B MIG1|SKD1|SKD1B|VPS4-2 vacuolar protein sorting 4 homolog B protein-coding 200.769-3 chr3 70355010 70355391 + 0.923077 NA Intergenic HAL1|LINE|L1 -42562 NM_001364676 107986096 NM_001364676 ENSG00000242120 MDFIC2 - MyoD family inhibitor domain containing 2 protein-coding 171.692-2 chr11 39942930 39943214 + 0.923077 NA Intergenic L1MA8|LINE|L1 350058 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 165.692-2 chr12 58842446 58842782 + 0.923077 NA Intergenic L1ME4a|LINE|L1 -60898 NR_120452 101927653 Hs.130744 NR_120452 ENSG00000257259 LINC02388 - long intergenic non-protein coding RNA 2388 ncRNA 207.692 chr1 77453487 77453812 + 0.923077 NA intron (NM_012093, intron 8 of 13) intron (NM_012093, intron 8 of 13) 170562 NM_012093 26289 Hs.559718 NM_012093 ENSG00000154027 AK5 AK6 adenylate kinase 5 protein-coding 182.308-3 chr10 132804347 132804663 + 0.923077 NA Intergenic Intergenic -18358 NM_177400 84504 Hs.134013 NM_177400 ENSG00000148826 NKX6-2 GTX|NKX6.2|NKX6B|SPAX8 NK6 homeobox 2 protein-coding 156.538-2 chr12 25406195 25406659 + 0.923077 NA Intergenic L1MD1|LINE|L1 146856 NM_001145728 160492 Hs.44647 NM_152590 ENSG00000152936 LMNTD1 IFLTD1|LMNARS1|PAS1C1 lamin tail domain containing 1 protein-coding 171.769 chr1 184508522 184508790 + 0.923077 NA intron (NM_030806, intron 3 of 5) intron (NM_030806, intron 3 of 5) 121627 NM_030806 81563 Hs.497159 NM_030806 ENSG00000116667 C1orf21 PIG13 chromosome 1 open reading frame 21 protein-coding 209.077-3 chr4 8665876 8666324 + 0.923077 NA Intergenic Intergenic 73335 NM_001014447 8532 Hs.61995 NM_003652 ENSG00000109625 CPZ - carboxypeptidase Z protein-coding 187.308-2 chr8 61833749 61833951 + 0.923077 NA Intergenic Intergenic -55989 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA 156.308-8 chr4 87314001 87314440 + 0.923077 NA intron (NM_178135, intron 4 of 6) intron (NM_178135, intron 4 of 6) 8662 NM_178135 345275 Hs.284414 NM_178135 ENSG00000170509 HSD17B13 HMFN0376|NIIL497|SCDR9|SDR16C3 hydroxysteroid 17-beta dehydrogenase 13 protein-coding 161-5 chr3 4953011 4953265 + 0.923077 NA intron (NR_125915, intron 1 of 3) intron (NR_125915, intron 1 of 3) -26299 NM_003670 8553 Hs.744856 NM_003670 ENSG00000134107 BHLHE40 BHLHB2|Clast5|DEC1|HLHB2|SHARP-2|SHARP2|STRA13|Stra14 basic helix-loop-helix family member e40 protein-coding 180.692-9 chr5 59222092 59222382 + 0.923077 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 53878 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 178.385-8 chr19 28371042 28371362 + 0.923077 NA Intergenic L1PB3|LINE|L1 -235486 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA 237.231 chr17 55871056 55871642 + 0.923077 NA Intergenic LTR85b|LTR|Gypsy? 120244 NM_001102402 58488 Hs.285218 NM_021213 ENSG00000141179 PCTP PC-TP|STARD2 phosphatidylcholine transfer protein protein-coding 185.538-4 chr20 24526541 24526881 + 0.923077 NA intron (NM_001323606, intron 2 of 4) L1MEd|LINE|L1 56750 NR_147606 79953 Hs.124638 NM_024893 ENSG00000101463 SYNDIG1 C20orf39|DSPC2|IFITMD5|TMEM90B synapse differentiation inducing 1 protein-coding 195.231-3 chr10 14911873 14912465 + 0.923077 NA intron (NR_110297, intron 15 of 16) MLT1A|LTR|ERVL-MaLR 33269 NM_024670 79723 Hs.554883 NM_024670 ENSG00000152455 SUV39H2 KMT1B suppressor of variegation 3-9 homolog 2 protein-coding 178.769 chr1 116968608 116968976 + 0.923077 NA intron (NM_020440, intron 6 of 8) L1MB7|LINE|L1 -32958 NM_001256109 9398 Hs.654598 NM_004258 ENSG00000134256 CD101 EWI-101|IGSF2|V7 CD101 molecule protein-coding 179.538-5 chr18 63609988 63610296 + 0.923077 NA Intergenic L1ME2|LINE|L1 22799 NM_012397 5275 Hs.241407 NM_012397 ENSG00000197641 SERPINB13 HSHUR7SEQ|HUR7|PI13|headpin serpin family B member 13 protein-coding 239.462 chr20 46404660 46405158 + 0.923077 NA intron (NM_133171, intron 1 of 21) MER33|DNA|hAT-Charlie 1706 NM_001318253 63916 Hs.210469 NM_022086 ENSG00000062598 ELMO2 CED-12|CED12|Ced-12A|ELMO-2|VMPI engulfment and cell motility 2 protein-coding 152-9 chr21 34659666 34659886 + 0.923077 NA Intergenic L1MA4A|LINE|L1 -9218 NM_001317009 54102 Hs.473695 NM_053277 ENSG00000159212 CLIC6 CLIC1L chloride intracellular channel 6 protein-coding 166.462-7 chr8 105460642 105460861 + 0.923077 NA intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 141208 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 153.154-8 chrX 111192504 111192946 + 0.923077 NA intron (NM_001128172, intron 10 of 14) intron (NM_001128172, intron 10 of 14) 69648 NM_001128172 5063 Hs.593599 NM_002578 ENSG00000077264 PAK3 ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK p21 (RAC1) activated kinase 3 protein-coding 160.308-5 chr2 225085679 225086111 + 0.923077 NA Intergenic Tigger2a|DNA|TcMar-Tigger -43427 NM_014689 55619 Hs.46578 NM_014689 ENSG00000135905 DOCK10 DRIP2|Nbla10300|ZIZ3 dedicator of cytokinesis 10 protein-coding 309.923-2 chr14 32684549 32684911 + 0.923077 NA intron (NM_004274, intron 8 of 13) MIRc|SINE|MIR -254149 NM_173159 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 154.154-6 chr16 13936379 13936610 + 0.923077 NA intron (NM_005236, intron 8 of 10) intron (NM_005236, intron 8 of 10) 16337 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 241.308 chr8 133971982 133972515 + 0.923077 NA Intergenic L1ME3Cz|LINE|L1 85752 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 183.846 chr1 104668986 104669340 + 0.923077 NA Intergenic L1MC4|LINE|L1 596140 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo 179-2 chr14 47319008 47319344 + 0.923077 NA intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) 24070 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 154-9 chr7 122644520 122644880 + 0.923077 NA intron (NM_001167940, intron 3 of 29) intron (NM_001167940, intron 3 of 29) 54417 NM_139175 168433 Hs.126730 NM_139175 ENSG00000188050 RNF133 - ring finger protein 133 protein-coding 176.308-4 chr2 163788447 163788818 + 0.923077 NA Intergenic Intergenic -52624 NM_018086 55137 Hs.593650 NM_018086 ENSG00000182263 FIGN - fidgetin, microtubule severing factor protein-coding 236.154-3 chr13 49035332 49035707 + 0.923077 NA intron (NM_001079673, intron 2 of 25) MIRc|SINE|MIR 58857 NR_103528 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding 184.154-9 chr8 120820906 120821136 + 0.923077 NA Intergenic Intergenic -8975 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 172.615-3 chr14 73223700 73223967 + 0.923077 NA TTS (NM_007318) TTS (NM_007318) -13673 NR_158678 89932 Hs.509909 NM_173462 ENSG00000100767 PAPLN PPN papilin, proteoglycan like sulfated glycoprotein protein-coding 165-2 chr18 4589049 4589243 + 0.923077 NA Intergenic Intergenic -133839 NM_004746 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding 206.923-2 chr5 114788936 114789451 + 0.923077 NA Intergenic Intergenic -15780 NR_130785 101927078 Hs.160027 NR_130785 LOC101927078 - uncharacterized LOC101927078 ncRNA 328.538 chr11 66304624 66305201 + 0.923077 NA Intergenic MIR|SINE|MIR 12132 NM_020404 57124 Hs.195727 NM_020404 ENSG00000174807 CD248 CD164L1|TEM1 CD248 molecule protein-coding 153.846-3 chr11 73275917 73276218 + 0.923077 NA intron (NM_001277207, intron 2 of 2) intron (NM_001277207, intron 2 of 2) 3925 NM_001277208 5031 Hs.16362 NM_004154 ENSG00000171631 P2RY6 P2Y6 pyrimidinergic receptor P2Y6 protein-coding 187.385-2 chr10 8479539 8479749 + 0.923077 NA Intergenic Intergenic 114747 NR_134492 105376398 Hs.63158 NR_134492 LOC105376398 - uncharacterized LOC105376398 ncRNA 163.538-3 chr14 53379455 53379645 + 0.923077 NA Intergenic L1PA6|LINE|L1 226196 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA 186.385 chr1 118657046 118657289 + 0.923077 NA Intergenic L1MEd|LINE|L1 331176 NM_001330677 6913 Hs.146196 NM_152380 ENSG00000092607 TBX15 TBX14 T-box transcription factor 15 protein-coding 183.846-6 chr7 33740201 33740431 + 0.923077 NA Intergenic Intergenic -164599 NM_133468 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding 156.923-19 chr6 70912762 70913042 + 0.923077 NA intron (NM_080742, intron 1 of 3) L1PA15|LINE|L1 44158 NM_080742 135152 Hs.713609 NM_080742 ENSG00000112309 B3GAT2 GLCATS beta-1,3-glucuronyltransferase 2 protein-coding 156.923-10 chr2 112671949 112672171 + 0.923077 NA Intergenic Intergenic 26121 NM_005415 6574 Hs.187946 NM_005415 ENSG00000144136 SLC20A1 GLVR1|Glvr-1|PIT1|PiT-1 solute carrier family 20 member 1 protein-coding 216.462 chr1 65905135 65905463 + 0.923077 NA intron (NM_002600, intron 1 of 16) L2b|LINE|L2 -7946 NM_001297441 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding 172.923-2 chr16 82162501 82162762 + 0.923077 NA intron (NM_005792, intron 2 of 4) LTR33|LTR|ERVL 7593 NM_005792 10200 Hs.344400 NM_005792 ENSG00000135698 MPHOSPH6 MPP|MPP-6|MPP6 M-phase phosphoprotein 6 protein-coding 183.385-2 chr22 44675281 44675763 + 0.923077 NA intron (NM_001017529, intron 1 of 7) intron (NM_001017529, intron 1 of 7) -1286 NM_001017530 55615 Hs.102336 NM_015366 ENSG00000186654 PRR5 FLJ20185k|PP610|PROTOR-1|PROTOR1 proline rich 5 protein-coding 162.769-2 chr13 33617048 33617452 + 0.923077 NA intron (NM_001243476, intron 3 of 17) MIR|SINE|MIR 59544 NM_001243476 90627 Hs.156551 NM_052851 ENSG00000133121 STARD13 ARHGAP37|DLC2|GT650|LINC00464 StAR related lipid transfer domain containing 13 protein-coding 193.846-2 chr14 62774853 62775321 + 0.923077 NA intron (NM_172375, intron 9 of 9) Charlie4a|DNA|hAT-Charlie 270371 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 161.231-2 chr14 42024486 42024989 + 0.923077 NA Intergenic MLT1A0-int|LTR|ERVL-MaLR 417881 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 211.231-4 chr8 126954734 126955083 + 0.923077 NA Intergenic Intergenic -58246 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 175.692 chr14 60025776 60026052 + 0.923077 NA intron (NR_075071, intron 27 of 32) L2|LINE|L2 -65997 NM_022495 64430 Hs.509499 NM_022495 ENSG00000126773 PCNX4 C14orf135|FBP2|PCNXL4 pecanex 4 protein-coding 182.769-6 chr2 114563307 114563679 + 0.923077 NA intron (NM_001321908, intron 2 of 25) intron (NM_001321908, intron 2 of 25) 101916 NM_001321905 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 157-5 chr16 68756171 68756616 + 0.923077 NA intron (NM_001317185, intron 2 of 15) intron (NM_001317185, intron 2 of 15) 19101 NM_001317186 999 Hs.461086 NM_004360 ENSG00000039068 CDH1 Arc-1|BCDS1|CD324|CDHE|ECAD|LCAM|UVO cadherin 1 protein-coding 206.769 chr10 6023111 6023498 + 0.923077 NA intron (NM_000417, intron 3 of 7) intron (NM_000417, intron 3 of 7) 39063 NM_001308242 3559 Hs.231367 NM_000417 ENSG00000134460 IL2RA CD25|IDDM10|IL2R|IMD41|TCGFR|p55 interleukin 2 receptor subunit alpha protein-coding 164.077-6 chr8 134735426 134735654 + 0.923077 NA Intergenic Intergenic -22509 NR_110323 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding 152.538-6 chr8 125868208 125868392 + 0.923077 NA Intergenic Intergenic 82897 NR_038447 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 161.462-3 chr3 107016859 107017089 + 0.923077 NA Intergenic L1MB1|LINE|L1 223664 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA 233.231-2 chr14 28946850 28947348 + 0.923077 NA Intergenic L2a|LINE|L2 -161312 NR_135255 105370424 Hs.375809 NR_135255 ENSG00000257056 LINC02282 - long intergenic non-protein coding RNA 2282 ncRNA 156 chr1 198042412 198042755 + 0.923077 NA Intergenic L2a|LINE|L2 -114415 NM_133494 140609 Hs.24119 NM_133494 ENSG00000151414 NEK7 - NIMA related kinase 7 protein-coding 177.462-5 chr8 59474129 59474423 + 0.923077 NA Intergenic Intergenic 355066 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 250.923 chr2 41594162 41594728 + 0.923077 NA Intergenic L1ME4b|LINE|L1 -283110 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 198.923-7 chr9 74813589 74813931 + 0.923077 NA intron (NM_017662, intron 11 of 38) HAL1|LINE|L1 73587 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding 228.308 chr8 117302706 117303220 + 0.923077 NA Intergenic L2c|LINE|L2 167968 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 217-2 chr4 102086730 102087048 + 0.923077 NA Intergenic Intergenic 237423 NM_001135148 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding 252.615 chr17 41539280 41539861 + 0.923077 NA Intergenic Intergenic -11262 NM_002276 3880 Hs.654568 NM_002276 ENSG00000171345 KRT19 CK19|K19|K1CS keratin 19 protein-coding 176.846-4 chr5 37577993 37578261 + 0.923077 NA intron (NM_001345998, intron 9 of 17) intron (NM_001345998, intron 9 of 17) 198809 NM_018034 55100 Hs.213690 NM_018034 ENSG00000082068 WDR70 - WD repeat domain 70 protein-coding 276.846-3 chr2 164170557 164171073 + 0.923077 NA Intergenic AluJb|SINE|Alu 397680 NM_001303422 2888 Hs.411881 NM_004490 ENSG00000115290 GRB14 - growth factor receptor bound protein 14 protein-coding 180-6 chr6 37141593 37141814 + 0.923077 NA Intergenic Intergenic -28449 NM_002648 5292 Hs.81170 NM_002648 ENSG00000137193 PIM1 PIM Pim-1 proto-oncogene, serine/threonine kinase protein-coding 192.923-4 chr22 25671703 25672114 + 0.923077 NA intron (NM_001362778, intron 5 of 19) MER33|DNA|hAT-Charlie -70280 NM_032608 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 181.154-5 chr3 180363134 180363382 + 0.923077 NA Intergenic L1MC1|LINE|L1 -50915 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA 160.923-2 chr13 23898163 23898463 + 0.923077 NA promoter-TSS (NR_104426) promoter-TSS (NR_104426) -811 NR_104426 387911 Hs.740810 NM_001007537 ENSG00000205863 C1QTNF9B CTRP9B C1q and TNF related 9B protein-coding 170.769-12 chr3 113977245 113977554 + 0.923077 NA intron (NR_148531, intron 14 of 14) intron (NR_148531, intron 14 of 14) 29386 NM_001320467 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding 244 chr18 72250688 72251131 + 0.923077 NA Intergenic L1ME1|LINE|L1 293433 NM_182511 147381 Hs.569851 NM_182511 ENSG00000141668 CBLN2 - cerebellin 2 precursor protein-coding 155.077-4 chr10 33583362 33583623 + 0.923077 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 189188 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 200-3 chr4 14005056 14005325 + 0.923077 NA Intergenic Intergenic -106778 NR_033931 152742 Hs.135435 NR_033931 ENSG00000248698 LINC01085 - long intergenic non-protein coding RNA 1085 ncRNA 246.231 chr5 22832267 22832652 + 0.923077 NA intron (NM_001364105, intron 1 of 15) intron (NM_001364105, intron 1 of 15) 20885 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 160.846-3 chr14 58467239 58467547 + 0.923077 NA intron (NM_001329944, intron 15 of 31) MIR|SINE|MIR 27712 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding 228 chr8 86829754 86830215 + 0.923077 NA Intergenic Intergenic -36431 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 214.462-2 chr4 94524579 94524859 + 0.923077 NA intron (NM_001011516, intron 3 of 9) MER5A|DNA|hAT-Charlie 72777 NM_001256429 10611 Hs.480311 NM_006457 ENSG00000163110 PDLIM5 ENH|ENH1|L9|LIM PDZ and LIM domain 5 protein-coding 183.077-6 chr4 32993968 32994190 + 0.923077 NA Intergenic Intergenic 643041 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 179-5 chr8 110715506 110715765 + 0.923077 NA Intergenic Intergenic 311798 NR_125417 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA 190.692-5 chr7 31543822 31544079 + 0.923077 NA intron (NM_001257968, intron 1 of 14) L1MC1|LINE|L1 -9052 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding 182.846-5 chrX 63984398 63984638 + 0.923077 NA Intergenic L1M1|LINE|L1 -198431 NR_031567 100302115 NR_031567 ENSG00000222532 MIR1468 MIRN1468|hsa-mir-1468|mir-1468 microRNA 1468 ncRNA 216.923-6 chr5 178604039 178604490 + 0.923077 NA intron (NM_020666, intron 11 of 12) MER5B|DNA|hAT-Charlie -13871 NM_173465 91522 Hs.660026 NM_173465 ENSG00000050767 COL23A1 - collagen type XXIII alpha 1 chain protein-coding 190.154-5 chr20 32282224 32282660 + 0.923077 NA intron (NM_004798, intron 1 of 8) intron (NM_004798, intron 1 of 8) 4791 NM_004798 9371 Hs.369670 NM_004798 ENSG00000101350 KIF3B FLA8|HH0048|KLP-11 kinesin family member 3B protein-coding 160.154-4 chr10 36123475 36123824 + 0.923077 NA Intergenic L1PB1|LINE|L1 345347 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 180.692-5 chr17 42710230 42710512 + 0.923077 NA intron (NM_001321079, intron 11 of 19) intron (NM_001321079, intron 11 of 19) -2220 NR_106838 102466195 NR_106838 ENSG00000275273 MIR6780A hsa-mir-6780a microRNA 6780a ncRNA 173.385 chr1 246393011 246393416 + 0.923077 NA intron (NM_001167740, intron 1 of 11) L1MB8|LINE|L1 24199 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding 234-2 chr2 149872384 149872877 + 0.923077 NA Intergenic MER113|DNA|hAT-Charlie -13439 NR_145421 150596 Hs.470217 NM_153041 ENSG00000162947 LINC01931 - long intergenic non-protein coding RNA 1931 ncRNA 203.539-2 chr3 182129992 182130315 + 0.923077 NA Intergenic Intergenic 177789 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA 154.923-7 chr2 181918466 181918802 + 0.923077 NA exon (NM_001130445, exon 12 of 18) exon (NM_001130445, exon 12 of 18) 26904 NM_001287503 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding 241.923 chr5 94723177 94723510 + 0.923077 NA intron (NM_001297777, intron 16 of 19) intron (NM_001297777, intron 16 of 19) 104674 NM_032290 84250 Hs.657315 NM_032290 ENSG00000133302 SLF1 ANKRD32|BRCTD1|BRCTx SMC5-SMC6 complex localization factor 1 protein-coding 155.231-2 chr13 71858298 71858653 + 0.923077 NA intron (NM_080759, intron 1 of 10) intron (NM_080759, intron 1 of 10) 8717 NM_080760 1602 Hs.129452 NM_004392 ENSG00000276644 DACH1 DACH dachshund family transcription factor 1 protein-coding 176.769-6 chr22 20887597 20887970 + 0.923077 NA exon (NM_004782, exon 5 of 5) exon (NM_004782, exon 5 of 5) 28776 NM_004782 9342 Hs.108002 NM_004782 ENSG00000099940 SNAP29 CEDNIK|SNAP-29 synaptosome associated protein 29 protein-coding 193.154-5 chr8 92700716 92701275 + 0.923077 NA Intergenic Intergenic -45501 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 153.077-6 chr5 102500962 102501219 + 0.923077 NA Intergenic Intergenic -2089 NM_001308014 133482 Hs.388874 NM_173488 ENSG00000205359 SLCO6A1 CT48|GST|OATP-I|OATP6A1|OATPY solute carrier organic anion transporter family member 6A1 protein-coding 229.769-2 chr7 95580123 95580423 + 0.923077 NA Intergenic Intergenic 16243 NM_002612 5166 Hs.8364 NM_002612 ENSG00000004799 PDK4 - pyruvate dehydrogenase kinase 4 protein-coding 153.769-2 chr18 32878618 32878996 + 0.923077 NA Intergenic Intergenic -105784 NM_020805 57565 Hs.446164 NM_020805 ENSG00000197705 KLHL14 - kelch like family member 14 protein-coding 199-3 chr9 117718457 117718773 + 0.923077 NA 3' UTR (NM_003266, exon 4 of 4) 3' UTR (NM_003266, exon 4 of 4) 14212 NM_138554 7099 Hs.174312 NM_003266 ENSG00000136869 TLR4 ARMD10|CD284|TLR-4|TOLL toll like receptor 4 protein-coding 167.077-5 chr20 52817624 52817932 + 0.923077 NA Intergenic Intergenic -154580 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding 228.615-2 chr9 72128134 72128589 + 0.923077 NA intron (NM_001242507, intron 1 of 13) intron (NM_001242507, intron 1 of 13) 13766 NM_001242507 9615 Hs.494163 NM_004293 ENSG00000119125 GDA CYPIN|GAH|GUANASE|NEDASIN guanine deaminase protein-coding 172.308-3 chr4 25632357 25632648 + 0.923077 NA Intergenic MIR|SINE|MIR -23349 NM_001177998 10568 Hs.479372 NM_006424 ENSG00000157765 SLC34A2 NAPI-3B|NAPI-IIb|NPTIIb solute carrier family 34 member 2 protein-coding 212.461-2 chr8 80335003 80335616 + 0.923077 NA Intergenic Intergenic 93920 NR_049894 100847056 NR_049894 ENSG00000265588 MIR5708 - microRNA 5708 ncRNA 176.154-8 chr7 82188366 82188590 + 0.923077 NA intron (NM_000722, intron 3 of 38) intron (NM_000722, intron 3 of 38) 179301 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA 167.692-11 chrX 44192753 44193077 + 0.923077 NA intron (NM_025184, intron 11 of 14) MER4B|LTR|ERV1 150757 NM_025184 80258 Hs.521953 NM_025184 ENSG00000183690 EFHC2 MRX74|dJ1158H2.1 EF-hand domain containing 2 protein-coding 194.308 chr1 49512050 49512315 + 0.923077 NA intron (NR_136623, intron 2 of 12) intron (NR_136623, intron 2 of 12) -40097 NR_046839 100874313 Hs.551277 NR_046839 ENSG00000225623 AGBL4-IT1 - AGBL4 intronic transcript 1 ncRNA 169.846 chr1 64334546 64334784 + 0.923077 NA Intergenic MIR|SINE|MIR 131042 NR_158769 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding 187.077-2 chr12 86100709 86101085 + 0.923077 NA intron (NM_001351286, intron 4 of 7) intron (NM_001351286, intron 4 of 7) 155494 NM_001351284 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding 235 chr3 197883054 197883383 + 0.923077 NA non-coding (NR_158582, exon 21 of 21) non-coding (NR_158582, exon 21 of 21) 66707 NM_001134435 84223 Hs.591675 NM_032263 ENSG00000114473 IQCG CFAP122|DRC9 IQ motif containing G protein-coding 181.692-4 chr2 23372560 23373062 + 0.923077 NA Intergenic Intergenic -12368 NM_052920 114818 Hs.130593 NM_025067 ENSG00000119771 KLHL29 KBTBD9 kelch like family member 29 protein-coding 256.077 chr6 46081810 46082319 + 0.923077 NA intron (NM_001370650, intron 1 of 6) MER106A|DNA|hAT-Charlie -1716 NM_001114086 53405 Hs.485489 NM_016929 ENSG00000112782 CLIC5 DFNB102|DFNB103|MST130|MSTP130 chloride intracellular channel 5 protein-coding 160.769-5 chr16 82089523 82089777 + 0.923077 NA intron (NM_002153, intron 3 of 4) MLT1C|LTR|ERVL-MaLR 54397 NM_002153 3294 Hs.162795 NM_002153 ENSG00000086696 HSD17B2 EDH17B2|HSD17|SDR9C2 hydroxysteroid 17-beta dehydrogenase 2 protein-coding 192.462-3 chr5 128740916 128741232 + 0.923077 NA Intergenic Intergenic -202829 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding 262.539 chr19 15099587 15099926 + 0.923077 NA Intergenic MER30|DNA|hAT-Charlie -7645 NM_033025 85360 Hs.528701 NM_033025 ENSG00000105137 SYDE1 7h3|SYD1 synapse defective Rho GTPase homolog 1 protein-coding 195.462-3 chr20 46648174 46648722 + 0.923077 NA intron (NM_001193340, intron 2 of 12) intron (NM_001193340, intron 2 of 12) 3011 NM_022829 64849 Hs.655498 NM_022829 ENSG00000158296 SLC13A3 ARLIAK|NADC3|SDCT2 solute carrier family 13 member 3 protein-coding 174.308 chr10 32424784 32425312 + 0.923077 NA Intergenic L1MEc|LINE|L1 21008 NR_120660 101929431 Hs.639819 NR_120660 LOC101929431 - uncharacterized LOC101929431 ncRNA 198.923-2 chr16 31295432 31295836 + 0.923077 NA intron (NM_001145808, intron 12 of 29) L1M3|LINE|L1 35659 NM_001145808 3684 Hs.172631 NM_000632 ENSG00000169896 ITGAM CD11B|CR3A|MAC-1|MAC1A|MO1A|SLEB6 integrin subunit alpha M protein-coding 196.615 chr1 43711549 43711780 + 0.923077 NA intron (NR_125986, intron 3 of 3) Tigger15a|DNA|TcMar-Tigger 4128 NM_006279 6487 Hs.597915 NM_006279 ENSG00000126091 ST3GAL3 EIEE15|MRT12|SIAT6|ST3GALII|ST3Gal III|ST3GalIII|ST3N ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein-coding 153.231-9 chr2 226824975 226825360 + 0.923077 NA intron (NM_001349069, intron 3 of 8) intron (NM_001349069, intron 3 of 8) -10887 NM_032276 84236 Hs.471514 NM_032276 ENSG00000144468 RHBDD1 RHBDL4|RRP4 rhomboid domain containing 1 protein-coding 284.769 chr5 93626244 93626660 + 0.923077 NA intron (NM_032042, intron 10 of 10) intron (NM_032042, intron 10 of 10) -5664 NR_031754 100313887 NR_031754 ENSG00000284336 MIR2277 mir-2277 microRNA 2277 ncRNA 204.539 chr1 58207845 58208111 + 0.923077 NA intron (NM_001353980, intron 1 of 5) THE1C|LTR|ERVL-MaLR 42525 NM_021080 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 188.308 chr11 23644070 23644306 + 0.923077 NA Intergenic Intergenic -224998 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA 208.769-2 chr15 87709148 87709624 + 0.923077 NA Intergenic Intergenic 132457 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA 158.538 chr1 239313752 239313984 + 0.923077 NA Intergenic Intergenic -72700 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding 156-12 chr3 22982720 22982959 + 0.923077 NA Intergenic Intergenic 219739 NR_136177 100505877 Hs.125904 NR_136176 ENSG00000233153 UBE2E2-AS1 - UBE2E2 antisense RNA 1 (head to head) ncRNA 188.077-2 chr2 32787236 32787650 + 0.923077 NA intron (NM_017735, intron 16 of 19) intron (NM_017735, intron 16 of 19) -37990 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA 225.692-5 chr2 66935976 66936346 + 0.923077 NA intron (NR_110169, intron 3 of 4) intron (NR_110169, intron 3 of 4) -13671 NR_110600 102724321 Hs.146803 NR_110600 ENSG00000232688 LINC01628 - long intergenic non-protein coding RNA 1628 ncRNA 201.231-4 chr3 117709094 117709378 + 0.923077 NA Intergenic Intergenic -18311 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 179.769-4 chr6 64295735 64295935 + 0.923077 NA intron (NM_001292009, intron 30 of 43) Charlie1a|DNA|hAT-Charlie 488999 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA 173.539-3 chr7 88491055 88491343 + 0.923077 NA Intergenic Intergenic -184305 NM_001205315 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding 196.154-2 chr19 44315007 44315422 + 0.923077 NA Intergenic Intergenic -10189 NM_004234 9310 Hs.613424 NM_004234 ENSG00000159917 ZNF235 ANF270|HZF6|ZFP93|ZNF270 zinc finger protein 235 protein-coding 166.769-5 chr15 80753454 80753844 + 0.923077 NA intron (NM_021214, intron 2 of 2) AluSx|SINE|Alu -25721 NM_001293304 57214 Hs.459088 NM_018689 ENSG00000103888 CEMIP CCSP1|HYBID|KIAA1199|TMEM2L cell migration inducing hyaluronidase 1 protein-coding 207.692-2 chr10 56543355 56543991 + 0.923077 NA Intergenic Intergenic -182400 NM_032997 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 197.769-2 chr13 30659257 30659524 + 0.923077 NA 3' UTR (NM_001321532, exon 8 of 8) 3' UTR (NM_001321532, exon 8 of 8) 25175 NM_001321534 10208 Hs.533831 NM_005800 ENSG00000132952 USPL1 C13orf22|D13S106E|bA121O19.1 ubiquitin specific peptidase like 1 protein-coding 226.923-2 chr5 77854519 77854892 + 0.923077 NA Intergenic Intergenic -29951 NR_105012 101929154 Hs.252895 NR_105012 LOC101929154 - uncharacterized LOC101929154 ncRNA 185.769-3 chr6 145162560 145162913 + 0.923077 NA Intergenic Intergenic 524141 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding 183-2 chr18 65221819 65222206 + 0.923077 NA Intergenic Intergenic -528240 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding 151.538 chr12 106790568 106790842 + 0.923077 NA intron (NR_147137, intron 2 of 10) intron (NR_147137, intron 2 of 10) -15874 NR_040246 100287944 Hs.742087 NR_040246 ENSG00000257545 LOC100287944 - uncharacterized LOC100287944 ncRNA 177.231 chr12 65992724 65993074 + 0.923077 NA Intergenic Intergenic 30827 NR_106722 102464827 NR_106722 ENSG00000276878 MIR6074 hsa-mir-6074 microRNA 6074 ncRNA 218.154-3 chr9 31922074 31922434 + 0.923077 NA Intergenic Intergenic -462349 NM_001278352 48 Hs.567229 NM_002197 ENSG00000122729 ACO1 ACONS|HEL60|IREB1|IREBP|IREBP1|IRP1 aconitase 1 protein-coding 164.308-10 chr5 71617536 71617801 + 0.923077 NA intron (NM_001363147, intron 6 of 15) intron (NM_001363147, intron 6 of 15) 30328 NM_022132 64087 Hs.604789 NM_022132 ENSG00000131844 MCCC2 MCCB methylcrotonoyl-CoA carboxylase 2 protein-coding 256.385-2 chr3 103941434 103942064 + 0.923077 NA Intergenic L1MA5|LINE|L1 -417633 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 162.692-4 chr16 14377195 14377384 + 0.923077 NA Intergenic Intergenic -7023 NR_131191 105447648 Hs.554151 NR_131191 ENSG00000260009 LINC02130 - long intergenic non-protein coding RNA 2130 ncRNA 173.769-5 chr5 67483565 67483802 + 0.923077 NA Intergenic Intergenic 163106 NR_147169 105379006 NR_147169 ENSG00000249736 LINC02242 - long intergenic non-protein coding RNA 2242 ncRNA 167.538-9 chr5 122744974 122745326 + 0.923077 NA Intergenic Intergenic -14590 NR_109881 101927379 Hs.536399 NR_109881 ENSG00000251538 LINC02201 - long intergenic non-protein coding RNA 2201 ncRNA 152.077-12 chr7 31802001 31802221 + 0.923077 NA intron (NM_001322057, intron 17 of 17) L1MEc|LINE|L1 114896 NM_006658 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding 222.769-2 chr4 42806800 42807322 + 0.923077 NA Intergenic Intergenic -86205 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 180.923-3 chr2 166343983 166344307 + 0.923077 NA intron (NM_001365536, intron 1 of 26) MamSINE1|SINE|tRNA-RTE 31799 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding 180.923-5 chr7 43721188 43721544 + 0.923077 NA intron (NM_001371314, intron 1 of 7) intron (NM_001371314, intron 1 of 7) 8157 NR_146943 55744 Hs.268887 NM_018224 ENSG00000106603 COA1 C7orf44|MITRAC15 cytochrome c oxidase assembly factor 1 homolog protein-coding 192.692-4 chr4 104881889 104882170 + 0.923077 NA Intergenic Intergenic -263846 NM_017628 54790 Hs.367639 NM_017628 ENSG00000168769 TET2 KIAA1546|MDS tet methylcytosine dioxygenase 2 protein-coding 200.846-2 chr14 82712954 82713367 + 0.923077 NA Intergenic Intergenic 70528 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 180.462 chr14 79204270 79204473 + 0.923077 NA intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) 4389 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA 168.769-9 chr5 121977697 121978013 + 0.923077 NA intron (NM_152546, intron 3 of 7) intron (NM_152546, intron 3 of 7) 15880 NM_152546 153443 Hs.107622 NM_152546 ENSG00000151304 SRFBP1 BUD22|P49|Rlb1|STRAP|p49/STRAP serum response factor binding protein 1 protein-coding 216.846-2 chr16 62325888 62326344 + 0.923077 NA Intergenic Intergenic -289678 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 227.692-2 chr8 114803336 114803689 + 0.923077 NA Intergenic Intergenic 864501 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 158.077-2 chr16 78756148 78756364 + 0.923077 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 656602 NM_001291997 51741 Hs.461453 NM_016373 ENSG00000186153 WWOX D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 WW domain containing oxidoreductase protein-coding 172.769 chr10 32283999 32284321 + 0.923077 NA intron (NM_001272004, intron 10 of 13) intron (NM_001272004, intron 10 of 13) 62998 NM_001272019 80314 Hs.167805 NM_025209 ENSG00000120616 EPC1 Epl1 enhancer of polycomb homolog 1 protein-coding 215 chr5 113382994 113383278 + 0.923077 NA intron (NM_001085377, intron 2 of 18) intron (NM_001085377, intron 2 of 18) 51853 NM_032028 83942 Hs.519507 NM_032028 ENSG00000212122 TSSK1B FKSG81|SPOGA4|STK22D|TSK1|TSSK1 testis specific serine kinase 1B protein-coding 159.231 chr10 85021552 85021916 + 0.923077 NA Intergenic Intergenic 177171 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 163.538-2 chr12 108355136 108355372 + 0.923077 NA Intergenic Intergenic -15943 NM_001142344 1240 Hs.197143 NM_004072 ENSG00000174600 CMKLR1 CHEMERINR|ChemR23|DEZ|RVER1 chemerin chemokine-like receptor 1 protein-coding 153.231-18 chr8 112051367 112051612 + 0.923077 NA Intergenic L2-1_AMi|LINE|L2 -592004 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 177.615-3 chr18 13275805 13276092 + 0.923077 NA intron (NM_181482, intron 1 of 5) intron (NM_181482, intron 1 of 5) -2157 NM_181481 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 165.154-3 chr14 57382897 57383075 + 0.923077 NA Intergenic Intergenic -7600 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding 183.692-3 chr20 34062204 34062578 + 0.923077 NA intron (NM_007367, intron 2 of 8) intron (NM_007367, intron 2 of 8) 13272 NR_039911 100616434 NR_039911 ENSG00000264616 MIR4755 mir-4755 microRNA 4755 ncRNA 156.308-4 chr2 11213551 11213866 + 0.923077 NA intron (NM_001321643, intron 17 of 32) intron (NM_001321643, intron 17 of 32) 58241 NM_001282712 130814 Hs.274415 NM_152391 ENSG00000162976 SLC66A3 C2orf22|PQLC3 solute carrier family 66 member 3 protein-coding 166.538 chr11 106158556 106158770 + 0.923077 NA Intergenic Intergenic -26547 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA 255.385 chr4 162320497 162320879 + 0.923077 NA Intergenic Intergenic -156654 NM_001128427 56884 Hs.32452 NM_020116 ENSG00000168843 FSTL5 - follistatin like 5 protein-coding 190.462-4 chr21 27026715 27027109 + 0.923077 NA Intergenic MLT2B1|LTR|ERVL -59824 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 208.154-7 chrX 37433636 37434085 + 0.923077 NA intron (NM_000950, intron 4 of 4) intron (NM_000950, intron 4 of 4) 84496 NM_001173486 5638 Hs.190341 NM_000950 ENSG00000130962 PRRG1 PRGP1 proline rich and Gla domain 1 protein-coding 208.538 chr1 79553123 79553636 + 0.923077 NA Intergenic Intergenic -546649 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding 173.538-6 chr2 59358351 59358840 + 0.923077 NA Intergenic Intergenic 140887 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 166.615-11 chr7 14310211 14310477 + 0.923077 NA intron (NM_001350717, intron 22 of 24) ERV3-16A3_I-int|LTR|ERVL -318919 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding 191.231-7 chr8 117048888 117049294 + 0.923077 NA intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) -85904 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 179.538-6 chr3 59464358 59464597 + 0.923077 NA Intergenic Intergenic 194020 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 166.846-4 chr2 70051397 70051763 + 0.923077 NA intron (NR_033872, intron 5 of 10) intron (NR_033872, intron 5 of 10) 35435 NR_033872 400960 Hs.683864 NR_033872 ENSG00000179818 PCBP1-AS1 - PCBP1 antisense RNA 1 ncRNA 158.538-4 chr13 35124486 35124700 + 0.923077 NA intron (NM_015678, intron 17 of 57) (AT)n|Simple_repeat|Simple_repeat 182306 NM_015678 26960 Hs.491172 NM_015678 ENSG00000172915 NBEA BCL8B|LYST2 neurobeachin protein-coding 226.385-2 chr8 118143731 118144338 + 0.923077 NA intron (NR_146234, intron 5 of 5) MLT1D|LTR|ERVL-MaLR -32215 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 177.462-2 chr3 19167383 19167917 + 0.923077 NA intron (NM_144633, intron 1 of 15) intron (NM_144633, intron 1 of 15) 19140 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding 171.154-6 chr3 83946542 83947153 + 0.923077 NA Intergenic MLT1D|LTR|ERVL-MaLR 922728 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 171.538-2 chr12 28532511 28533006 + 0.923077 NA intron (NM_001352082, intron 13 of 13) Charlie2b|DNA|hAT-Charlie -342020 NR_148936 729291 Hs.129278 NR_148936 LOC729291 - uncharacterized LOC729291 ncRNA 180.769-3 chr3 78343248 78343529 + 0.923077 NA Intergenic Intergenic -294425 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA 184.077-2 chr2 167614245 167614586 + 0.923077 NA Intergenic L1M5|LINE|L1 -204257 NM_020981 8708 Hs.735833 NM_020981 ENSG00000172318 B3GALT1 beta3Gal-T1 beta-1,3-galactosyltransferase 1 protein-coding 157.308-5 chr2 15243899 15244069 + 0.923077 NA intron (NR_052013, intron 44 of 50) MLT1J1-int|LTR|ERVL-MaLR 317350 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 190.692-4 chr7 11302620 11302908 + 0.923077 NA Intergenic L1MEg|LINE|L1 328892 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding 161.538-4 chr10 36197861 36198283 + 0.923077 NA Intergenic L1MD1|LINE|L1 419770 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 226.769-2 chr2 58791394 58791665 + 0.923077 NA intron (NR_033873, intron 2 of 13) intron (NR_033873, intron 2 of 13) 270776 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA 179.692-5 chr2 15261922 15262148 + 0.923077 NA intron (NR_052013, intron 44 of 50) MLT1K|LTR|ERVL-MaLR 299299 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 238.846 chr5 17843849 17844375 + 0.923077 NA intron (NR_134286, intron 2 of 7) (AT)n|Simple_repeat|Simple_repeat 36838 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 219.692 chr5 1530529 1530993 + 0.923077 NA Intergenic L1MEc|LINE|L1 -6801 NM_024830 79888 Hs.368853 NM_024830 ENSG00000153395 LPCAT1 AGPAT10|AGPAT9|AYTL2|LPCAT-1|PFAAP3|lpcat|lysoPAFAT lysophosphatidylcholine acyltransferase 1 protein-coding 161.462-4 chr6 25179474 25179800 + 0.923077 NA Intergenic Intergenic -41245 NR_027626 8418 Hs.484918 NR_002174 ENSG00000168405 CMAHP CMAH|CSAH cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene pseudo 287.385 chr3 190405719 190406339 + 0.923077 NA intron (NM_006580, intron 3 of 4) intron (NM_006580, intron 3 of 4) 18157 NM_006580 10686 Hs.251391 NM_006580 ENSG00000113946 CLDN16 HOMG3|PCLN1 claudin 16 protein-coding 300 chr4 30780400 30781028 + 0.923077 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 60345 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 192.538-2 chr14 73171902 73172213 + 0.923077 NA intron (NM_000021, intron 4 of 11) intron (NM_000021, intron 4 of 11) 35550 NM_000021 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding 222.154-2 chr8 120799173 120799456 + 0.923077 NA intron (NM_021021, intron 1 of 6) intron (NM_021021, intron 1 of 6) 12732 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 239.077 chr4 109274388 109274825 + 0.923077 NA intron (NM_198721, intron 3 of 36) intron (NM_198721, intron 3 of 36) 28052 NM_032518 84570 Hs.658842 NM_032518 ENSG00000188517 COL25A1 AMY|CFEOM5|CLAC|CLAC-P|CLACP collagen type XXV alpha 1 chain protein-coding 192.923 chr11 40815890 40816283 + 0.923077 NA intron (NM_020929, intron 1 of 4) intron (NM_020929, intron 1 of 4) -522956 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 210.615 chr21 32172395 32172708 + 0.923077 NA Intergenic L1MB7|LINE|L1 -86256 NR_038033 100551499 Hs.224449 NR_038033 LINC00159 C21orf44|NCRNA00159 long intergenic non-protein coding RNA 159 ncRNA 193.385 chr1 176069442 176069715 + 0.923077 NA intron (NM_022457, intron 11 of 19) intron (NM_022457, intron 11 of 19) -101038 NR_002998 677679 NR_002998 ENSG00000252906 SCARNA3 HBI-100 small Cajal body-specific RNA 3 ncRNA 237.846 chr14 80485684 80485963 + 0.923077 NA Intergenic Intergenic -254766 NM_000793 1734 Hs.202354 NM_000793 ENSG00000211448 DIO2 5DII|D2|DIOII|SelY|TXDI2 iodothyronine deiodinase 2 protein-coding 239.846 chr17 71028256 71028748 + 0.923077 NA Intergenic Intergenic 173677 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 175.384-2 chr1 80058826 80059198 + 0.923077 NA Intergenic L1ME3B|LINE|L1 -476743 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 154.615-17 chrX 79578345 79578616 + 0.923077 NA Intergenic Intergenic -210928 NM_001171581 9452 Hs.17109 NM_004867 ENSG00000078596 ITM2A BRICD2A|E25A integral membrane protein 2A protein-coding 165.692-5 chr14 44811503 44811741 + 0.923077 NA Intergenic Intergenic -12496 NR_146457 101927351 Hs.196842 NR_146457 LINC02302 - long intergenic non-protein coding RNA 2302 ncRNA 176.308-6 chr20 23329287 23329613 + 0.923077 NA Intergenic Intergenic -21341 NM_013248 29107 Hs.516933 NM_013248 ENSG00000132661 NXT1 MTR2|P15 nuclear transport factor 2 like export factor 1 protein-coding 165.769 chr1 212241200 212241526 + 0.923077 NA intron (NR_125984, intron 1 of 3) intron (NR_125984, intron 1 of 3) -6627 NR_125982 101929541 Hs.632493 NR_125982 ENSG00000226251 LINC02608 - long intergenic non-protein coding RNA 2608 ncRNA 211.385 chr3 102768095 102768475 + 0.923077 NA Intergenic Tigger1|DNA|TcMar-Tigger 333270 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 185.538-3 chr2 189631660 189631890 + 0.923077 NA Intergenic L2a|LINE|L2 -29624 NM_001353493 110599588 Hs.101364 NM_001353493 ENSG00000286053 ASDURF ASNSD1|ASNSD1-SEP|NS3TP1 ASNSD1 upstream reading frame protein-coding 215.308-2 chr5 54413362 54413852 + 0.923077 NA intron (NR_126379, intron 4 of 4) intron (NR_126379, intron 4 of 4) -42092 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding 182.769-2 chr14 42040038 42040486 + 0.923077 NA Intergenic L1M1|LINE|L1 433406 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 190.385-5 chr5 128773244 128773505 + 0.923077 NA Intergenic Intergenic -191753 NM_014031 28965 Hs.49765 NM_014031 ENSG00000113396 SLC27A6 ACSVL2|FACVL2|FATP6|VLCS-H1 solute carrier family 27 member 6 protein-coding 211.692-2 chr8 136725115 136725529 + 0.923077 NA intron (NR_147196, intron 2 of 5) intron (NR_147196, intron 2 of 5) 194524 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 159.077-3 chr13 68491379 68491687 + 0.923077 NA Intergenic Intergenic 393792 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA 163.077-7 chr7 94100567 94100859 + 0.923077 NA Intergenic Intergenic -96358 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding 186.923-3 chr15 56635879 56636113 + 0.923077 NA intron (NM_001002843, intron 19 of 20) MIRb|SINE|MIR 98090 NM_001288588 54816 Hs.511477 NM_017661 ENSG00000137871 ZNF280D SUHW4|ZNF634 zinc finger protein 280D protein-coding 167.846-5 chr22 26379632 26379912 + 0.923077 NA intron (NM_001184776, intron 14 of 14) intron (NM_001184776, intron 14 of 14) -49488 NM_020437 57168 Hs.567547 NM_020437 ENSG00000128203 ASPHD2 - aspartate beta-hydroxylase domain containing 2 protein-coding 186.846-2 chr14 61815225 61815627 + 0.923077 NA intron (NM_001367656, intron 1 of 7) intron (NM_001367656, intron 1 of 7) 2723 NM_001367652 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 225.923 chr10 43559608 43559972 + 0.923077 NA intron (NM_001099283, intron 1 of 1) HAL1ME|LINE|L1 8669 NM_005674 8187 Hs.25040 NM_005674 ENSG00000196793 ZNF239 HOK-2|MOK2 zinc finger protein 239 protein-coding 202.385-4 chr8 85557531 85557876 + 0.923077 NA Intergenic AluJb|SINE|Alu -92788 NR_121630 100996348 Hs.606624 NR_121630 ENSG00000253549 CA3-AS1 - CA3 antisense RNA 1 ncRNA 184.154-11 chr9 103440389 103440775 + 0.923077 NA Intergenic Charlie1a|DNA|hAT-Charlie -115549 NR_121578 101928496 Hs.410860 NR_121578 ENSG00000225564 LINC01492 - long intergenic non-protein coding RNA 1492 ncRNA 170.923-6 chr5 92186632 92186892 + 0.923077 NA Intergenic Intergenic -803445 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 344.538 chr7 83379385 83380236 + 0.923077 NA intron (NM_001178129, intron 16 of 16) MIR|SINE|MIR -216926 NM_014510 27445 Hs.12376 NM_014510 ENSG00000186472 PCLO ACZ|PCH3 piccolo presynaptic cytomatrix protein protein-coding 242.692 chr8 26904754 26905157 + 0.923077 NA Intergenic MamGypLTR3a|LTR|Gypsy -37677 NM_000680 148 Hs.52931 NM_000680 ENSG00000120907 ADRA1A ADRA1C|ADRA1L1|ALPHA1AAR adrenoceptor alpha 1A protein-coding 170.077-6 chr5 28654551 28654997 + 0.923077 NA Intergenic Intergenic -272096 NR_033961 729862 Hs.646006 NR_033961 LSP1P3 - LSP1 pseudogene 3 pseudo 154.154-23 chr9 20853655 20853955 + 0.923077 NA intron (NM_017794, intron 17 of 45) intron (NM_017794, intron 17 of 45) 66878 NR_145762 109616992 NR_145762 ENSG00000202189 SNORA30B - small nucleolar RNA, H/ACA box 30B snoRNA 158.538-3 chr11 41543865 41544283 + 0.923077 NA Intergenic MIRb|SINE|MIR -84422 NM_001258419 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 220.615-4 chr18 4241339 4241779 + 0.923077 NA intron (NM_001242761, intron 1 of 11) intron (NM_001242761, intron 1 of 11) -23043 NR_036489 284215 Hs.647594 NR_036489 ENSG00000261520 DLGAP1-AS5 - DLGAP1 antisense RNA 5 ncRNA 199.769-6 chr2 144026743 144027211 + 0.923077 NA intron (NM_001354355, intron 7 of 13) intron (NM_001354355, intron 7 of 13) 89910 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 190.154-2 chr12 131779510 131779821 + 0.923077 NA intron (NM_004592, intron 14 of 17) intron (NM_004592, intron 14 of 17) -48728 NM_016155 4326 Hs.709245 NM_016155 ENSG00000198598 MMP17 MMP-17|MT4-MMP|MT4MMP|MTMMP4 matrix metallopeptidase 17 protein-coding 267.538 chr4 26434677 26435190 + 0.923077 NA 3' UTR (NM_203283, exon 11 of 11) 3' UTR (NM_203283, exon 11 of 11) 55551 NM_000730 886 Hs.129 NM_000730 ENSG00000163394 CCKAR CCK-A|CCK1-R|CCK1R|CCKRA cholecystokinin A receptor protein-coding 174.769-2 chr14 57346373 57346731 + 0.923077 NA Intergenic Intergenic -44034 NM_001011713 122830 Hs.165465 NM_001011713 ENSG00000139977 NAA30 C14orf35|MAK3|Mak3p|NAT12|NAT12P N(alpha)-acetyltransferase 30, NatC catalytic subunit protein-coding 154.615-10 chr6 71965033 71965413 + 0.923077 NA intron (NM_001350412, intron 1 of 2) intron (NM_001350412, intron 1 of 2) 78520 NM_001350413 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding 198.231 chr11 83209127 83209683 + 0.923077 NA intron (NM_001300975, intron 3 of 10) intron (NM_001300975, intron 3 of 10) 15693 NM_001300977 338699 Hs.503438 NM_182603 ENSG00000137494 ANKRD42 PPP1R79|SARP ankyrin repeat domain 42 protein-coding 225.539 chr15 101850537 101850866 + 0.923077 NA TTS (NR_046417) TTS (NR_046417) 8582 NR_046417 390651 Hs.578689 NR_046417 ENSG00000214344 OR4F13P GPCRLTM7 olfactory receptor family 4 subfamily F member 13 pseudogene pseudo 186.769-2 chr6 64486974 64487391 + 0.923077 NA intron (NM_001292009, intron 26 of 43) intron (NM_001292009, intron 26 of 43) 680346 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA 170.462-2 chr1 95699238 95699503 + 0.923077 NA Intergenic Intergenic 189254 NR_110622 100996635 Hs.639548 NR_110621 ENSG00000228971 LINC02607 - long intergenic non-protein coding RNA 2607 ncRNA 192-4 chr4 125052630 125052980 + 0.923077 NA Intergenic Intergenic -263607 NM_024582 79633 Hs.563205 NM_024582 ENSG00000196159 FAT4 CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2 FAT atypical cadherin 4 protein-coding 180.692-7 chr2 112758223 112758446 + 0.923077 NA intron (NR_130712, intron 3 of 9) intron (NR_130712, intron 3 of 9) 6275 NR_130712 150468 Hs.434250 NM_152515 ENSG00000169607 CKAP2L - cytoskeleton associated protein 2 like protein-coding 203.231 chr2 85472221 85472605 + 0.923077 NA Intergenic Intergenic 53482 NM_201594 284948 Hs.209542 NM_198482 ENSG00000152292 SH2D6 - SH2 domain containing 6 protein-coding 186.539-2 chr2 237203190 237203502 + 0.923077 NA Intergenic Intergenic 117457 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding 254.154-2 chr8 121261747 121262118 + 0.923077 NA Intergenic L2c|LINE|L2 -377414 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 193.615 chr2 171031052 171031324 + 0.923077 NA intron (NM_001136555, intron 9 of 18) intron (NM_001136555, intron 9 of 18) 35785 NM_001136555 9874 Hs.744917 NM_012290 ENSG00000198586 TLK1 PKU-beta tousled like kinase 1 protein-coding 191 chr18 69383498 69383835 + 0.923077 NA Intergenic Intergenic -17222 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding 203.615 chr15 76710901 76711299 + 0.923077 NA intron (NR_148227, intron 17 of 32) L1ME2|LINE|L1 124453 NR_037464 100500855 NR_037464 ENSG00000266449 MIR3713 - microRNA 3713 ncRNA 193.384 chr2 13976519 13976865 + 0.923077 NA Intergenic L2a|LINE|L2 424266 NR_103814 100499171 Hs.565606 NR_103814 ENSG00000230448 LINC00276 NCRNA00276 long intergenic non-protein coding RNA 276 ncRNA 189-2 chr16 75898725 75899004 + 0.923077 NA Intergenic Intergenic -172374 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding 219.385-3 chr6 62780220 62780778 + 0.923077 NA Intergenic Intergenic -494272 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 214.231 chr8 83625591 83625837 + 0.923077 NA Intergenic L1PREC2|LINE|L1 221956 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 193.385-2 chr14 102626460 102626704 + 0.923077 NA intron (NM_015156, intron 2 of 11) intron (NM_015156, intron 2 of 11) 33933 NM_015156 23186 Hs.510521 NM_015156 ENSG00000089902 RCOR1 COREST|RCOR REST corepressor 1 protein-coding 179.154-2 chr13 39694823 39695245 + 0.923077 NA intron (NM_001145079, intron 12 of 18) intron (NM_001145079, intron 12 of 18) -30899 NR_036190 100422940 NR_036190 ENSG00000264171 MIR4305 - microRNA 4305 ncRNA 212.615 chr11 57584386 57584751 + 0.923077 NA Intergenic Intergenic -12986 NM_000062 710 Hs.384598 NM_000062 ENSG00000149131 SERPING1 C1IN|C1INH|C1NH|HAE1|HAE2 serpin family G member 1 protein-coding 160.846-4 chr17 65991094 65991349 + 0.923077 NA intron (NM_001353129, intron 17 of 26) intron (NM_001353129, intron 17 of 26) -164678 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 169.077-5 chr8 105369477 105369781 + 0.923077 NA intron (NM_001362837, intron 1 of 7) intron (NM_001362837, intron 1 of 7) 50086 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 154.615-9 chr2 185953635 185954010 + 0.923077 NA Intergenic Intergenic 132495 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA 169.615-13 chr8 137733583 137733952 + 0.923077 NA Intergenic MLT1A1-int|LTR|ERVL-MaLR -320179 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 204.923-4 chr5 111263646 111263983 + 0.923077 NA intron (NM_001744, intron 1 of 10) intron (NM_001744, intron 1 of 10) 39430 NM_001744 814 Hs.438801 NM_001744 ENSG00000152495 CAMK4 CaMK IV|CaMK-GR|CaMKIV|caMK calcium/calmodulin dependent protein kinase IV protein-coding 191.692-3 chr4 104044123 104044490 + 0.923077 NA Intergenic Intergenic -324321 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding 227.692 chr5 164387930 164388334 + 0.923077 NA Intergenic Intergenic 79270 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA 160.154-16 chr9 110535533 110535938 + 0.923077 NA intron (NM_153366, intron 3 of 47) L1PREC2|LINE|L1 44006 NM_153366 79987 Hs.522334 NM_153366 ENSG00000165124 SVEP1 C9orf13|CCP22|POLYDOM|SEL-OB|SELOB sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 protein-coding 168.308-10 chr9 11456340 11456575 + 0.923077 NA Intergenic Intergenic 843251 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA 236-3 chr2 172673230 172673619 + 0.923077 NA Intergenic MER50|LTR|ERV1 -62421 NM_007023 11069 Hs.470646 NM_007023 ENSG00000091428 RAPGEF4 CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496 Rap guanine nucleotide exchange factor 4 protein-coding 230.308 chr6 54191487 54191998 + 0.923077 NA intron (NM_001281746, intron 10 of 11) intron (NM_001281746, intron 10 of 11) 80299 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding 260.077 chr20 41935139 41935502 + 0.923077 NA Intergenic Intergenic -316943 NM_032221 84181 Hs.740645 NM_032221 ENSG00000124177 CHD6 CHD-6|CHD5|RIGB chromodomain helicase DNA binding protein 6 protein-coding 168.846-4 chr20 22901734 22902004 + 0.923077 NA Intergenic L1PA15|LINE|L1 -133551 NM_001052 6754 Hs.673846 NM_001052 ENSG00000132671 SSTR4 SS-4-R|SS4-R|SS4R somatostatin receptor 4 protein-coding 203.077-3 chr2 116129409 116129698 + 0.923077 NA Intergenic MER90|LTR|ERV1 785738 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 190.462 chr12 5715792 5716041 + 0.923077 NA intron (NM_001278596, intron 15 of 25) intron (NM_001278596, intron 15 of 25) 221784 NM_002527 4908 Hs.99171 NM_002527 ENSG00000185652 NTF3 HDNF|NGF-2|NGF2|NT-3|NT3 neurotrophin 3 protein-coding 207.231 chr1 211443722 211444115 + 0.923077 NA Intergenic MLT1E1A|LTR|ERVL-MaLR 48999 NM_001164688 343035 Hs.632495 NM_183059 ENSG00000198570 RD3 C1orf36|LCA12 retinal degeneration 3, GUCY2D regulator protein-coding 160.615-7 chr16 75950175 75950484 + 0.923077 NA Intergenic L1ME3|LINE|L1 -223839 NM_001355613 105371346 NM_001355613 ENSG00000283755 CPHXL - cytoplasmic polyadenylated homeobox like protein-coding 192.923-7 chr7 50760562 50760960 + 0.923077 NA intron (NM_001001555, intron 1 of 16) intron (NM_001001555, intron 1 of 16) 22135 NM_001371009 232.231 chr2 101346536 101346982 + 0.923077 NA 3' UTR (NM_153836, exon 4 of 4) 3' UTR (NM_153836, exon 4 of 4) 37309 NR_049881 100847007 NR_049881 ENSG00000264857 MIR5696 - microRNA 5696 ncRNA 179.538-4 chr18 60815644 60816019 + 0.923077 NA Intergenic L1P4|LINE|L1 -443056 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding 181.846 chr1 64213523 64213783 + 0.923077 NA intron (NM_001366232, intron 4 of 9) L2b|LINE|L2 10030 NR_158769 148581 Hs.388746 NM_152489 ENSG00000177414 UBE2U - ubiquitin conjugating enzyme E2 U protein-coding 280 chr4 66473297 66473810 + 0.923077 NA Intergenic Intergenic 196729 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 152.538-5 chr6 149335274 149335489 + 0.923077 NA intron (NM_015093, intron 1 of 8) (TA)n|Simple_repeat|Simple_repeat 17081 NM_015093 23118 Hs.269775 NM_015093 ENSG00000055208 TAB2 CHTD2|MAP3K7IP2|TAB-2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 protein-coding 202.462-3 chr2 66173189 66173496 + 0.923077 NA Intergenic Intergenic 184986 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA 176.077-4 chr16 7894696 7894926 + 0.923077 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 561966 NM_145891 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding 212.308-2 chr17 29615159 29615617 + 0.923077 NA TTS (NM_152345) TTS (NM_152345) 2729 NM_001351302 84940 Hs.143046 NM_032854 ENSG00000167549 CORO6 - coronin 6 protein-coding 246.461 chr10 115334506 115334998 + 0.923077 NA intron (NM_207303, intron 19 of 28) intron (NM_207303, intron 19 of 28) 241387 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding 186.462-4 chr2 119039160 119039557 + 0.923077 NA Intergenic L1M5|LINE|L1 97189 NM_006770 8685 Hs.67726 NM_006770 ENSG00000019169 MARCO SCARA2|SR-A6 macrophage receptor with collagenous structure protein-coding 188.923-4 chr7 46112931 46113322 + 0.923077 NA Intergenic L1MD|LINE|L1 -191854 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 152.923-12 chr4 60969450 60969676 + 0.923077 NA Intergenic Intergenic 46944 NR_039652 100616450 NR_039652 ENSG00000265829 MIR548AG1 - microRNA 548ag-1 ncRNA 172.462-5 chr6 64167564 64167857 + 0.923077 NA intron (NM_001292009, intron 31 of 43) intron (NM_001292009, intron 31 of 43) 360874 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA 158.308-10 chr5 7209536 7209935 + 0.923077 NA Intergenic Intergenic 59619 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 215.385 chr2 103101735 103102017 + 0.923077 NA Intergenic L1MD1|LINE|L1 -117447 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 248 chr2 199795555 199795881 + 0.923077 NA intron (NM_001350855, intron 3 of 3) intron (NM_001350855, intron 3 of 3) 55455 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding 168.923-6 chr5 61922799 61923065 + 0.923077 NA Intergenic Intergenic -187234 NR_105000 100506526 Hs.662277 NR_105000 C5orf64-AS1 - C5orf64 antisense RNA 1 ncRNA 159.846-6 chr2 194587006 194587303 + 0.923077 NA Intergenic Intergenic -143441 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA 209.538 chr11 110870089 110870453 + 0.923077 NA Intergenic Intergenic -157082 NM_001258418 57569 Hs.6136 NM_020809 ENSG00000137727 ARHGAP20 RARHOGAP Rho GTPase activating protein 20 protein-coding 168.308-6 chr5 17994719 17995117 + 0.923077 NA Intergenic Intergenic 187644 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 173.923-3 chr14 74038644 74039012 + 0.923077 NA intron (NM_025057, intron 4 of 11) AluJb|SINE|Alu 19479 NM_025057 80127 Hs.644621 NM_025057 ENSG00000119636 BBOF1 C14orf45|CCDC176 basal body orientation factor 1 protein-coding 170.615-6 chr7 112461852 112462196 + 0.923077 NA exon (NM_001197079, exon 7 of 12) exon (NM_001197079, exon 7 of 12) 9966 NM_001197079 3475 Hs.7879 NM_001550 ENSG00000006652 IFRD1 PC4|TIS7 interferon related developmental regulator 1 protein-coding 209.846 chr15 47360961 47361321 + 0.923077 NA intron (NM_001198999, intron 1 of 19) intron (NM_001198999, intron 1 of 19) 177052 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding 153.462-5 chr4 103725216 103725426 + 0.923077 NA Intergenic Intergenic -5336 NM_001059 6870 Hs.942 NM_001059 ENSG00000169836 TACR3 HH11|NK-3R|NK3|NK3R|NKR|TAC3R|TAC3RL tachykinin receptor 3 protein-coding 203.077-6 chr5 15005976 15006365 + 0.923077 NA Intergenic L2b|LINE|L2 -134392 NM_054027 56172 Hs.156727 NM_054027 ENSG00000154122 ANKH ANK|CCAL2|CMDJ|CPPDD|HANK|MANK|SLC62A1 ANKH inorganic pyrophosphate transport regulator protein-coding 182.308-4 chr11 11839670 11839899 + 0.923077 NA Intergenic Charlie7|DNA|hAT-Charlie -1639 NM_017944 55031 Hs.577256 NM_017944 ENSG00000170242 USP47 TRFP ubiquitin specific peptidase 47 protein-coding 177.615-4 chr22 28186966 28187190 + 0.923077 NA intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -266466 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 165.538-6 chr8 71123287 71123516 + 0.923077 NA Intergenic L1M4|LINE|L1 233305 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding 153.385-4 chr5 42232170 42232347 + 0.923077 NA Intergenic L1MC1|LINE|L1 -56913 NR_104635 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 191-2 chr2 19640345 19640695 + 0.923077 NA Intergenic MIR3|SINE|MIR -228334 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA 170.154-2 chr2 212987122 212987469 + 0.923077 NA Intergenic Tigger13a|DNA|TcMar-Tigger -60959 NR_039936 100616472 NR_039936 ENSG00000283637 MIR4776-2 mir-4776-2 microRNA 4776-2 ncRNA 180.692-3 chr11 59270638 59271106 + 0.923077 NA Intergenic AluJo|SINE|Alu -57945 NM_001039396 219972 Hs.744920 NM_001039396 ENSG00000197629 MPEG1 MPG1|MPS1|Mpg-1|P-2 macrophage expressed 1 protein-coding 198.923-8 chr9 84410490 84411064 + 0.923077 NA Intergenic AluSz6|SINE|Alu -42050 NM_022127 64078 Hs.535966 NM_022127 ENSG00000197506 SLC28A3 CNT3 solute carrier family 28 member 3 protein-coding 181.846-6 chr22 28067194 28067429 + 0.923077 NA intron (NM_001145418, intron 12 of 22) L2b|LINE|L2 -146699 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 244.769 chr5 108874264 108874722 + 0.923077 NA intron (NR_146155, intron 7 of 19) intron (NR_146155, intron 7 of 19) -50113 NM_001308031 2241 Hs.107418 NM_005246 ENSG00000151422 FER PPP1R74|TYK3|p94-Fer FER tyrosine kinase protein-coding 153.538-4 chr5 18768337 18768613 + 0.923077 NA Intergenic L1M5|LINE|L1 961201 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 196-4 chr12 8778961 8779252 + 0.923077 NA intron (NR_147950, intron 7 of 8) intron (NR_147950, intron 7 of 8) -43515 NM_144670 144568 Hs.620532 NM_144670 ENSG00000166535 A2ML1 CPAMD9|OMS|p170 alpha-2-macroglobulin like 1 protein-coding 207.231-7 chr5 34737882 34738302 + 0.923077 NA intron (NM_001145525, intron 4 of 19) intron (NM_001145525, intron 4 of 19) 50533 NM_001145523 26064 Hs.431400 NM_015577 ENSG00000039560 RAI14 NORPEG|RAI13 retinoic acid induced 14 protein-coding 188.462 chr10 72560946 72561555 + 0.923077 NA intron (NM_006077, intron 3 of 11) L2|LINE|L2 -37264 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding 174.385-6 chr7 77353647 77354154 + 0.923077 NA intron (NM_001350896, intron 16 of 29) intron (NM_001350896, intron 16 of 29) -61298 NR_110073 101927243 Hs.547753 NR_110073 LOC101927243 - uncharacterized LOC101927243 ncRNA 213.692-6 chr5 61520683 61521158 + 0.923077 NA intron (NM_020928, intron 4 of 13) intron (NM_020928, intron 4 of 13) -116840 NR_161251 285668 Hs.683866 NR_126523 ENSG00000178722 C5orf64 - chromosome 5 open reading frame 64 ncRNA 176.769-9 chr5 12585943 12586181 + 0.923077 NA intron (NR_033383, intron 1 of 3) L1MA2|LINE|L1 11205 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA 163.385-5 chr8 51047088 51047517 + 0.923077 NA Intergenic Intergenic 762143 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding 189.538-2 chr22 29282187 29282478 + 0.923077 NA intron (NM_001163286, intron 5 of 15) intron (NM_001163286, intron 5 of 15) 14064 NM_005243 2130 Hs.374477 NM_005243 ENSG00000182944 EWSR1 EWS|EWS-FLI1|bK984G1.4 EWS RNA binding protein 1 protein-coding 159.692-7 chr3 89842938 89843255 + 0.923077 NA Intergenic Intergenic 735475 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 179.538-8 chr7 39154343 39154547 + 0.923077 NA intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -140878 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA 169.154-3 chr10 51845360 51845691 + 0.923077 NA intron (NM_001098512, intron 4 of 17) MIRb|SINE|MIR -145930 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding 193.385-3 chr15 26755453 26755827 + 0.923077 NA intron (NM_001278631, intron 3 of 9) intron (NM_001278631, intron 3 of 9) 17426 NM_000814 2562 Hs.302352 NM_000814 ENSG00000166206 GABRB3 ECA5|EIEE43 gamma-aminobutyric acid type A receptor beta3 subunit protein-coding 190.923-4 chr3 118311281 118311836 + 0.923077 NA Intergenic L1MC5a|LINE|L1 -330210 NR_135573 101926968 Hs.518185 NR_135573 LOC101926968 - uncharacterized LOC101926968 ncRNA 174.385-4 chr2 37899756 37900332 + 0.923077 NA Intergenic THE1B|LTR|ERVL-MaLR -24181 NR_110012 101929559 Hs.468200 NR_110011 ENSG00000237803 LINC00211 NCRNA00211 long intergenic non-protein coding RNA 211 ncRNA 170.538-5 chr18 12663687 12663935 + 0.923077 NA intron (NR_073537, intron 12 of 12) AluJo|SINE|Alu 5072 NM_147163 56984 Hs.464652 NM_020232 ENSG00000128789 PSMG2 CLAST3|HCCA3|HsT1707|MDS003|PAC2|TNFSF5IP1 proteasome assembly chaperone 2 protein-coding 178.154-6 chr3 10701365 10701612 + 0.923077 NA Intergenic Intergenic 62721 NR_152730 285370 Hs.157613 NR_027102 ENSG00000226567 LINC00606 - long intergenic non-protein coding RNA 606 ncRNA 262.231 chr17 62873237 62873989 + 0.923077 NA Intergenic Intergenic 65111 NR_135634 101927877 Hs.434615 NR_135634 ENSG00000265000 MARCH10-DT - MARCH10 divergent transcript ncRNA 213.692-2 chr17 60842463 60842875 + 0.923077 NA intron (NM_001330413, intron 7 of 25) intron (NM_001330413, intron 7 of 25) 164818 NM_001353146 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 152.923-8 chr2 32823188 32823396 + 0.923077 NA Intergenic Intergenic -2141 NR_027098 285045 Hs.434660 NR_027097 ENSG00000230876 LINC00486 - long intergenic non-protein coding RNA 486 ncRNA 252.538 chr20 55260358 55260880 + 0.923077 NA Intergenic Intergenic -162424 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA 169.769 chr1 119820037 119820375 + 0.923077 NA Intergenic L1ME3|LINE|L1 -8746 NM_001159353 83998 Hs.660883 NM_032044 ENSG00000134193 REG4 GISP|REG-IV|RELP regenerating family member 4 protein-coding 155.692-3 chr16 81390587 81390902 + 0.923077 NA Intergenic Intergenic 5726 NR_039871 100616150 NR_039871 ENSG00000284473 MIR4720 - microRNA 4720 ncRNA 187.154 chr14 71493577 71493831 + 0.923077 NA intron (NM_001284247, intron 1 of 23) intron (NM_001284247, intron 1 of 23) 5843 NR_027046 145474 Hs.658241 NR_027046 LOC145474 - uncharacterized LOC145474 ncRNA 181.231-5 chr5 87033747 87034095 + 0.923077 NA Intergenic L1PBa|LINE|L1 81033 NR_036243 100422887 NR_036243 ENSG00000265919 MIR4280 - microRNA 4280 ncRNA 181.308-2 chr10 32976330 32976706 + 0.923077 NA Intergenic Intergenic -18288 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding 169.385-5 chr5 7177230 7177551 + 0.923077 NA Intergenic MIR|SINE|MIR 91964 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 191.308-6 chr3 275900 276191 + 0.923077 NA intron (NM_001253387, intron 2 of 26) intron (NM_001253387, intron 2 of 26) -43638 NM_001253388 10752 Hs.148909 NM_006614 ENSG00000134121 CHL1 CALL|L1CAM2 cell adhesion molecule L1 like protein-coding 161.692-7 chr4 135715950 135716198 + 0.923077 NA Intergenic Intergenic 172019 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA 196.308-3 chr8 132742216 132742670 + 0.923077 NA intron (NM_144649, intron 5 of 9) L2c|LINE|L2 18139 NM_001364885 137835 Hs.293842 NM_144649 ENSG00000165071 TMEM71 - transmembrane protein 71 protein-coding 188.538 chr17 62767159 62767428 + 0.923077 NA intron (NM_001288780, intron 4 of 10) intron (NM_001288780, intron 4 of 10) 39347 NM_001100875 162333 Hs.665663 NM_152598 ENSG00000173838 MARCH10 MARCH-X|RNF190 membrane associated ring-CH-type finger 10 protein-coding 208.923-3 chr2 59706710 59707048 + 0.923077 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 489171 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 152.769-8 chr6 60692201 60692398 + 0.923077 NA Intergenic L1MEd|LINE|L1 -881831 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 178.231-5 chr5 28169323 28169557 + 0.923077 NA Intergenic Intergenic 118225 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA 177.462 chr10 62236321 62236615 + 0.923077 NA intron (NM_145307, intron 5 of 11) L1MA9|LINE|L1 32376 NM_001282941 219790 Hs.58559 NM_145307 ENSG00000182010 RTKN2 PLEKHK1|bA531F24.1 rhotekin 2 protein-coding 188.231-5 chr2 170099773 170100384 + 0.923077 NA Intergenic L2a|LINE|L2 -78069 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding 165.692-10 chr5 78743571 78743851 + 0.923077 NA Intergenic L1MEg|LINE|L1 -94939 NM_005779 10184 Hs.79299 NM_005779 ENSG00000145685 LHFPL2 - LHFPL tetraspan subfamily member 2 protein-coding 161.231-11 chr5 100142778 100143037 + 0.923077 NA Intergenic Intergenic 245347 NR_027503 100133050 Hs.534796 NR_027503 LOC100133050 - glucuronidase beta pseudogene pseudo 320.231 chr5 20393366 20394039 + 0.923077 NA intron (NM_001349558, intron 1 of 15) L1PB3|LINE|L1 88151 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA 255.615 chr2 123693460 123694009 + 0.923077 NA Intergenic L1MCa|LINE|L1 331440 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 208.923-4 chr3 35795481 35795726 + 0.923077 NA Intergenic Intergenic 51127 NR_029824 406916 NR_029824 ENSG00000207625 MIR128-2 MIR128B|MIRN128-2|MIRN128B|mir-128-2|mir-128b microRNA 128-2 ncRNA 186.462-5 chr3 89603595 89603991 + 0.923077 NA Intergenic Intergenic 496172 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 242.923 chr12 27292277 27292585 + 0.923077 NA intron (NM_015000, intron 1 of 13) intron (NM_015000, intron 1 of 13) -40405 NM_001248005 56938 Hs.445447 NM_020183 ENSG00000029153 ARNTL2 BMAL2|CLIF|MOP9|PASD9|bHLHe6 aryl hydrocarbon receptor nuclear translocator like 2 protein-coding 155.077-11 chr2 60724093 60724319 + 0.923077 NA Intergenic L1MD|LINE|L1 -32062 NM_022894 64895 Hs.387471 NM_022894 ENSG00000115421 PAPOLG - poly(A) polymerase gamma protein-coding 168.923-4 chr3 97153580 97153958 + 0.923077 NA intron (NM_001080448, intron 3 of 17) intron (NM_001080448, intron 3 of 17) -285838 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 234 chr2 100931891 100932383 + 0.923077 NA intron (NM_002518, intron 3 of 20) intron (NM_002518, intron 3 of 20) 45024 NR_110213 101927142 Hs.656556 NR_110213 LOC101927142 - uncharacterized LOC101927142 ncRNA 177.923-4 chr7 47027588 47028054 + 0.923077 NA Intergenic Intergenic -330699 NR_134575 730338 Hs.640207 NR_134575 ENSG00000233539 LOC730338 - uncharacterized LOC730338 ncRNA 217.538-3 chr4 107180474 107180909 + 0.923077 NA Intergenic MLT1A|LTR|ERVL-MaLR -144378 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding 205.154-2 chr2 30698382 30698718 + 0.923077 NA Intergenic L1ME1|LINE|L1 108896 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding 158 chr1 38626425 38626687 + 0.923077 NA Intergenic Intergenic 151360 NR_146761 105378656 Hs.128924 NR_146761 ENSG00000238063 LINC01685 - long intergenic non-protein coding RNA 1685 ncRNA 239.385-2 chr10 33704987 33705434 + 0.923077 NA Intergenic Intergenic 67470 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 201.231-3 chr2 118125306 118125632 + 0.923077 NA Intergenic Intergenic 36919 NM_001321329 51141 Hs.7089 NM_016133 ENSG00000125629 INSIG2 INSIG-2 insulin induced gene 2 protein-coding 243.692-2 chr8 119098842 119099179 + 0.923077 NA intron (NM_001324095, intron 5 of 7) intron (NM_001324095, intron 5 of 7) -30228 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA 200.077-2 chr2 214486980 214487386 + 0.923077 NA intron (NM_001080500, intron 3 of 3) MLT1B|LTR|ERVL-MaLR -22999 NR_047698 100885780 Hs.665982 NR_047698 ENSG00000224257 VWC2L-IT1 - VWC2L intronic transcript 1 ncRNA 220.154-6 chr8 85143977 85144285 + 0.923077 NA intron (NM_033402, intron 18 of 18) intron (NM_033402, intron 18 of 18) 32910 NR_134311 102723322 Hs.535913 NR_134311 ENSG00000260493 LOC102723322 - uncharacterized LOC102723322 ncRNA 161.308-2 chr10 539618 539908 + 0.923077 NA intron (NM_014974, intron 1 of 36) intron (NM_014974, intron 1 of 36) -88801 NR_147612 101930421 Hs.654707 NR_147612 ENSG00000225140 LOC101930421 - uncharacterized LOC101930421 ncRNA 175.077-5 chr5 13644183 13644403 + 0.923077 NA Intergenic MLT1J|LTR|ERVL-MaLR 300187 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 181.231-7 chr8 122231875 122232109 + 0.923077 NA Intergenic Intergenic 336652 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 182.615-2 chr3 4484064 4484449 + 0.923077 NA Intergenic AluJo|SINE|Alu 8907 NR_108075 100996539 Hs.190365 NR_108075 ITPR1-DT ITPR1-AS1 ITPR1 divergent transcript ncRNA 171.462-5 chr4 175700669 175700890 + 0.923077 NA intron (NM_201592, intron 2 of 6) intron (NM_201592, intron 2 of 6) 86897 NM_001261448 2823 Hs.75819 NM_005277 ENSG00000150625 GPM6A GPM6|M6A glycoprotein M6A protein-coding 207.231-6 chr2 198647067 198647416 + 0.923077 NA Intergenic Intergenic -272144 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA 152.769 chr1 82871685 82871901 + 0.923077 NA Intergenic Intergenic -31390 NR_147074 103283057 Hs.551280 NR_147074 ENSG00000230817 LINC01362 - long intergenic non-protein coding RNA 1362 ncRNA 241.385-2 chr4 43496615 43497040 + 0.923077 NA Intergenic Intergenic -4284 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 205.231-3 chr5 5608092 5608322 + 0.923077 NA Intergenic Intergenic 185530 NM_015325 23379 Hs.449296 NM_015325 ENSG00000164151 ICE1 KIAA0947 interactor of little elongation complex ELL subunit 1 protein-coding 229.154 chr7 79118500 79118851 + 0.923077 NA intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) 109687 NR_046689 100874021 Hs.128252 NR_046689 ENSG00000226978 MAGI2-AS2 - MAGI2 antisense RNA 2 ncRNA 191.077 chr11 82649997 82650271 + 0.923077 NA Intergenic MLT2A2|LTR|ERVL 83730 NM_175885 220382 Hs.448218 NM_175885 ENSG00000182103 FAM181B - family with sequence similarity 181 member B protein-coding 176.538 chr16 11869085 11869354 + 0.923077 NA 3' UTR (NM_001130006, exon 15 of 15) 3' UTR (NM_001130006, exon 15 of 15) -17677 NM_015659 26156 Hs.401842 NM_015659 ENSG00000171490 RSL1D1 CSIG|L12|PBK1|UTP30 ribosomal L1 domain containing 1 protein-coding 181.154-8 chr8 104054602 104054943 + 0.923077 NA intron (NM_001348499, intron 19 of 23) intron (NM_001348499, intron 19 of 23) -168563 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 220.539 chr5 78263848 78264252 + 0.923077 NA intron (NM_003664, intron 2 of 26) Tigger3a|DNA|TcMar-Tigger 30648 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding 189.692-6 chr9 112201051 112201336 + 0.923077 NA Intergenic Intergenic -25896 NM_001282640 64420 Hs.494827 NM_022486 ENSG00000106868 SUSD1 - sushi domain containing 1 protein-coding 153.231-11 chr3 100480803 100480996 + 0.923077 NA Intergenic L1MA8|LINE|L1 -11720 NM_001363876 55076 Hs.658956 NM_018004 ENSG00000181458 TMEM45A DERP7|DNAPTP4 transmembrane protein 45A protein-coding 314.615 chr14 69162031 69162601 + 0.923077 NA Intergenic L1MA2|LINE|L1 -9119 NM_001284206 8816 Hs.509780 NM_003861 ENSG00000139990 DCAF5 BCRG2|BCRP2|D14S1461E|WDR22 DDB1 and CUL4 associated factor 5 protein-coding 199.385-4 chr3 180109059 180109373 + 0.923077 NA Intergenic L1MC5a|LINE|L1 -72279 NM_016559 51555 Hs.235331 NM_016559 ENSG00000114757 PEX5L PEX5R|PEX5RP|PXR2|PXR2B|TRIP8b peroxisomal biogenesis factor 5 like protein-coding 176.615-3 chr18 51653706 51654021 + 0.923077 NA Intergenic Intergenic 261821 NR_040074 100287225 Hs.448920 NR_040074 ENSG00000227115 LINC01630 - long intergenic non-protein coding RNA 1630 ncRNA 186.923-2 chr11 83593693 83594032 + 0.923077 NA intron (NM_001142699, intron 19 of 27) intron (NM_001142699, intron 19 of 27) 88563 NM_001142702 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 309.692 chr15 58906187 58906804 + 0.923077 NA intron (NR_135042, intron 4 of 18) intron (NR_135042, intron 4 of 18) 27184 NR_135043 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding 152.923-6 chr17 61911719 61912072 + 0.923077 NA intron (NM_001351695, intron 6 of 24) intron (NM_001351695, intron 6 of 24) 16087 NM_001330417 57508 Hs.279646 NM_020748 ENSG00000108506 INTS2 INT2|KIAA1287 integrator complex subunit 2 protein-coding 159.615-2 chr14 65202087 65202470 + 0.923077 NA Intergenic Intergenic 20069 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA 190.231-4 chr6 18154452 18154760 + 0.923077 NA promoter-TSS (NM_153042) promoter-TSS (NM_153042) 563 NM_001346817 7172 Hs.444319 NM_000367 ENSG00000137364 TPMT TPMTD thiopurine S-methyltransferase protein-coding 172-3 chr22 25636422 25636660 + 0.923077 NA intron (NM_001362778, intron 2 of 19) L1MC4|LINE|L1 71866 NM_001362778 157 Hs.657494 NM_005160 ENSG00000100077 GRK3 ADRBK2|BARK2 G protein-coupled receptor kinase 3 protein-coding 158.077-11 chr9 70614849 70615090 + 0.923077 NA intron (NM_001366143, intron 17 of 25) intron (NM_001366143, intron 17 of 25) 195115 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA 153.846-5 chr3 104498109 104498606 + 0.923077 NA Intergenic Intergenic -868356 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 174.231-4 chr17 67165481 67165836 + 0.923077 NA intron (NM_001330447, intron 15 of 32) intron (NM_001330447, intron 15 of 32) -79118 NR_136398 101928021 Hs.569824 NR_136398 LOC101928021 - uncharacterized LOC101928021 ncRNA 183.692-5 chr6 152955849 152956113 + 0.923077 NA Intergenic L1MB7|LINE|L1 27060 NM_012177 26271 Hs.520506 NM_012177 ENSG00000112029 FBXO5 EMI1|FBX5|Fbxo31 F-box protein 5 protein-coding 217.615-2 chr8 109100206 109100727 + 0.923077 NA intron (NM_003301, intron 2 of 2) intron (NM_003301, intron 2 of 2) 13838 NM_003301 7201 Hs.3022 NM_003301 ENSG00000174417 TRHR TRH-R thyrotropin releasing hormone receptor protein-coding 229.385-3 chr8 56970019 56970662 + 0.923077 NA intron (NM_017813, intron 3 of 4) L1MC5a|LINE|L1 23527 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding 162.923-3 chr4 30815092 30815380 + 0.923077 NA intron (NM_032457, intron 1 of 2) MER50|LTR|ERV1 94867 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 209.077-4 chr8 85857043 85857314 + 0.923077 NA Intergenic Intergenic -29236 NR_003594 100288527 Hs.535056 NR_003594 REXO1L2P - REXO1 like 2, pseudogene pseudo 165.385-6 chr2 102577198 102577503 + 0.923077 NA Intergenic L1M3de|LINE|L1 -42203 NM_003048 6549 Hs.250083 NM_003048 ENSG00000115616 SLC9A2 NHE2 solute carrier family 9 member A2 protein-coding 225.538-2 chr14 52802373 52802765 + 0.923077 NA Intergenic L2a|LINE|L2 -10962 NM_198066 64841 Hs.478025 NM_198066 ENSG00000100522 GNPNAT1 GNA1|GNPNAT|Gpnat1 glucosamine-phosphate N-acetyltransferase 1 protein-coding 157.538-8 chr3 22007198 22007530 + 0.923077 NA Intergenic L1MC4a|LINE|L1 50225 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA 261.231-2 chr13 52724084 52724639 + 0.923077 NA intron (NM_007015, intron 3 of 6) AluY|SINE|Alu 15459 NM_007015 11061 Hs.421391 NM_007015 ENSG00000136110 CNMD BRICD3|CHM-I|CHM1|LECT1|MYETS1 chondromodulin protein-coding 175.538-4 chr5 160032182 160032435 + 0.923077 NA intron (NM_003314, intron 2 of 7) intron (NM_003314, intron 2 of 7) 23169 NM_003314 7265 Hs.519718 NM_003314 ENSG00000113312 TTC1 TPR1 tetratricopeptide repeat domain 1 protein-coding 170.538-4 chr16 46587143 46587464 + 0.923077 NA intron (NR_136738, intron 10 of 13) L1MD1|LINE|L1 -18206 NR_026556 124149 Hs.97414 NM_001004299 ANKRD26P1 - ankyrin repeat domain 26 pseudogene 1 pseudo 217.923 chr1 49142357 49142630 + 0.923077 NA intron (NM_001323575, intron 4 of 12) MIRb|SINE|MIR -114918 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA 151.769-4 chr12 56405607 56405903 + 0.923077 NA Intergenic LTR19-int|LTR|ERV1 -42898 NM_001638 319 Hs.534302 NM_001638 ENSG00000175336 APOF Apo-F|LTIP apolipoprotein F protein-coding 211.923-2 chr17 77904826 77905264 + 0.923077 NA Intergenic (TGTATA)n|Simple_repeat|Simple_repeat -20958 NR_028337 400624 Hs.514521 NM_001001685 ENSG00000204283 LINC01973 - long intergenic non-protein coding RNA 1973 ncRNA 161.538-3 chr1 62955285 62955560 + 0.923077 NA Intergenic L4_A_Mam|LINE|RTE-X 55503 NR_146607 105378769 Hs.435002 NR_146605 ENSG00000229537 LINC01739 - long intergenic non-protein coding RNA 1739 ncRNA 225.846 chr1 117941156 117941650 + 0.923077 NA intron (NM_006784, intron 8 of 26) intron (NM_006784, intron 8 of 26) 11664 NM_006784 10885 Hs.310809 NM_006784 ENSG00000065183 WDR3 DIP2|UTP12 WD repeat domain 3 protein-coding 230.231 chr11 125024128 125024630 + 0.923077 NA intron (NM_025004, intron 13 of 15) L1M1|LINE|L1 -38926 NM_198277 219855 Hs.352661 NM_198277 ENSG00000134955 SLC37A2 pp11662 solute carrier family 37 member 2 protein-coding 205.692-2 chr8 82399428 82399938 + 0.923077 NA Intergenic Intergenic -512421 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA 247.846 chr8 106961641 106962163 + 0.923077 NA Intergenic LTR29|LTR|ERV1 -191658 NM_139166 137735 Hs.374668 NM_139166 ENSG00000174429 ABRA STARS actin binding Rho activating protein protein-coding 205.231-2 chr22 26484772 26485403 + 0.923077 NA intron (NM_001013694, intron 1 of 6) intron (NM_001013694, intron 1 of 6) 1210 NM_001013694 402055 Hs.709914 NM_001013694 ENSG00000100104 SRRD HC/HCC|SRR1L SRR1 domain containing protein-coding 192.923-8 chr8 84259248 84259666 + 0.923077 NA intron (NM_001354320, intron 2 of 9) MIRc|SINE|MIR 74791 NM_001100391 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 216.308-4 chr9 119395942 119396322 + 0.923077 NA Intergenic MER2|DNA|TcMar-Tigger -26697 NM_014618 1620 Hs.532316 NM_014618 ENSG00000078725 BRINP1 DBC1|DBCCR1|FAM5A BMP/retinoic acid inducible neural specific 1 protein-coding 267.615 chr8 21008381 21008772 + 0.923077 NA Intergenic L1MD2|LINE|L1 34590 NR_033894 286114 Hs.651884 NR_033894 ENSG00000253199 LINC02153 - long intergenic non-protein coding RNA 2153 ncRNA 159.154 chr10 82203902 82204138 + 0.923077 NA intron (NM_001165973, intron 2 of 10) MamRep605|LTR?|LTR? 28900 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 286.769 chr2 102759480 102760126 + 0.923077 NA intron (NM_001321344, intron 2 of 5) MLT1D|LTR|ERVL-MaLR -2228 NM_144632 130827 Hs.436203 NM_144632 ENSG00000170417 TMEM182 - transmembrane protein 182 protein-coding 199.846-5 chr22 28113755 28114202 + 0.923077 NA intron (NM_001145418, intron 6 of 22) intron (NM_001145418, intron 6 of 22) -193366 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 216.615-2 chr4 34516448 34516773 + 0.923077 NA Intergenic Intergenic -246863 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 248.769-3 chr6 73726541 73726936 + 0.923077 NA intron (NM_001159588, intron 3 of 31) intron (NM_001159588, intron 3 of 31) 30535 NM_133493 135228 Hs.399891 NM_133493 ENSG00000156535 CD109 CPAMD7|p180|r150 CD109 molecule protein-coding 167.385-6 chr3 191065635 191065882 + 0.923077 NA Intergenic Intergenic -133483 NM_198184 344901 Hs.526794 NM_198184 ENSG00000188729 OSTN MUSCLIN osteocrin protein-coding 172.923 chr14 20260749 20261054 + 0.923077 NA Intergenic Intergenic 18109 NM_001004479 390442 Hs.553767 NM_001004479 ENSG00000176198 OR11H4 OR14-36 olfactory receptor family 11 subfamily H member 4 protein-coding 164.846-8 chr8 118331653 118331951 + 0.923077 NA intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -219983 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 315.846 chr2 13608398 13608847 + 0.923077 NA Intergenic L2a|LINE|L2 -601609 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 223.846-3 chr7 87838174 87838709 + 0.923077 NA intron (NM_018843, intron 10 of 11) intron (NM_018843, intron 10 of 11) 37919 NM_018843 55972 Hs.208414 NM_018843 ENSG00000075303 SLC25A40 MCFP solute carrier family 25 member 40 protein-coding 247.077 chr3 1043469 1043945 + 0.923077 NA Intergenic L1MB4|LINE|L1 -49317 NM_001349350 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding 186.923-7 chr20 56311411 56311701 + 0.923077 NA Intergenic Intergenic -47418 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding 241.846-2 chr10 55655053 55655545 + 0.923077 NA Intergenic Intergenic -27357 NM_001354404 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 171.461-2 chr15 36780849 36781345 + 0.923077 NA intron (NM_032499, intron 11 of 11) intron (NM_032499, intron 11 of 11) 37409 NR_027320 161635 Hs.659822 NR_027320 CSNK1A1P1 CSNK1A1P casein kinase 1 alpha 1 pseudogene 1 pseudo 216.769-2 chr6 39743608 39743965 + 0.846154 NA Intergenic Intergenic -18363 NM_001351503 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding 262.308 chr1 8697688 8698373 + 0.846154 NA intron (NM_001042681, intron 1 of 22) MER41B|LTR|ERV1 119610 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding 153.231-8 chr19 32418324 32418674 + 0.846154 NA intron (NM_207325, intron 3 of 18) MER3|DNA|hAT-Charlie 12374 NM_207325 147991 Hs.194392 NM_207325 ENSG00000178904 DPY19L3 - dpy-19 like C-mannosyltransferase 3 protein-coding 206.154 chr5 83894304 83894671 + 0.846154 NA Intergenic Intergenic -173632 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding 169.308-4 chr6 24253900 24254316 + 0.846154 NA intron (NM_016356, intron 7 of 9) Tigger3b|DNA|TcMar-Tigger -102795 NM_181337 353219 Hs.697888 NM_181337 ENSG00000146049 KAAG1 RU2AS kidney associated antigen 1 protein-coding 157 chr10 100716528 100716821 + 0.846154 NA Intergenic Intergenic -18722 NM_001304569 5076 Hs.155644 NM_000278 ENSG00000075891 PAX2 FSGS7|PAPRS paired box 2 protein-coding 183.692-6 chr8 79966185 79966742 + 0.846154 NA intron (NM_014018, intron 2 of 2) L1M5|LINE|L1 63796 NM_014018 28957 Hs.521124 NM_014018 ENSG00000147586 MRPS28 HSPC007|MRP-S28|MRP-S35|MRPS35 mitochondrial ribosomal protein S28 protein-coding 193.154-4 chr8 84861522 84861906 + 0.846154 NA intron (NM_001287244, intron 4 of 7) intron (NM_001287244, intron 4 of 7) 155787 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 163.231 chr10 35601277 35601565 + 0.846154 NA Intergenic Intergenic -3920 NM_153368 219770 Hs.638922 NM_153368 ENSG00000177291 GJD4 CX40.1 gap junction protein delta 4 protein-coding 191.923-2 chr7 48276495 48276800 + 0.846154 NA intron (NM_152701, intron 17 of 61) intron (NM_152701, intron 17 of 61) 105189 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding 160.769-7 chr3 182189238 182189577 + 0.846154 NA Intergenic Intergenic 237043 NR_104146 100996490 Hs.606987 NR_104146 ENSG00000242512 LINC01206 - long intergenic non-protein coding RNA 1206 ncRNA 215.231 chr10 98242930 98243357 + 0.846154 NA intron (NM_001256620, intron 8 of 8) intron (NM_001256620, intron 8 of 8) 25051 NM_032211 84171 Hs.306814 NM_032211 ENSG00000138131 LOXL4 LOXC lysyl oxidase like 4 protein-coding 152.538-2 chr14 86128608 86128926 + 0.846154 NA intron (NR_110155, intron 3 of 3) intron (NR_110155, intron 3 of 3) 194089 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 264.077 chr15 83726321 83726673 + 0.846154 NA intron (NM_207517, intron 3 of 29) L1MA3|LINE|L1 72374 NM_001301110 57188 Hs.459162 NM_207517 ENSG00000156218 ADAMTSL3 ADAMTSL-3 ADAMTS like 3 protein-coding 157-8 chr5 15826843 15827158 + 0.846154 NA intron (NM_001278317, intron 2 of 3) L2c|LINE|L2 -108182 NR_030616 100126347 NR_030616 ENSG00000216077 MIR887 MIRN887|hsa-mir-887 microRNA 887 ncRNA 200.615-3 chr20 34254662 34255077 + 0.846154 NA Intergenic Intergenic -5496 NM_001672 434 Hs.659995 NM_001672 ENSG00000101440 ASIP AGSW|AGTI|AGTIL|ASP|SHEP9 agouti signaling protein protein-coding 223.692 chr2 71403226 71403569 + 0.846154 NA intron (NM_001252613, intron 16 of 27) L1ME4c|LINE|L1 -50164 NM_001130976 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding 162.462 chr10 82014235 82014560 + 0.846154 NA intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 136710 NR_163252 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 162.308-7 chrX 51208324 51208677 + 0.846154 NA Intergenic Intergenic -37079 NR_110382 101926971 Hs.657995 NR_110382 ENSG00000230317 LINC01284 - long intergenic non-protein coding RNA 1284 ncRNA 153.231-2 chr1 192619409 192619696 + 0.846154 NA Intergenic MIR|SINE|MIR -16595 NM_002927 6003 Hs.497220 NM_002927 ENSG00000127074 RGS13 - regulator of G protein signaling 13 protein-coding 164.538 chr1 98998867 98999085 + 0.846154 NA intron (NM_001037317, intron 1 of 5) intron (NM_001037317, intron 1 of 5) -5300 NR_033940 100129620 Hs.588631 NR_033940 ENSG00000232825 LOC100129620 - uncharacterized LOC100129620 ncRNA 192.538 chr1 149843956 149844184 + 0.846154 NA Intergenic Intergenic -1319 NM_001040874 723790 Hs.530461 NM_001040874 ENSG00000272196 HIST2H2AA4 H2A/R histone cluster 2 H2A family member a4 protein-coding 240.769 chr14 62449005 62449459 + 0.846154 NA Intergenic MLT1L|LTR|ERVL-MaLR -309259 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 177.846 chr1 217160360 217160611 + 0.846154 NA Intergenic AluJo|SINE|Alu -22783 NM_001134285 2104 Hs.444225 NM_001438 ENSG00000196482 ESRRG ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 estrogen related receptor gamma protein-coding 239 chr2 198118910 198119390 + 0.846154 NA intron (NM_006226, intron 5 of 5) intron (NM_006226, intron 5 of 5) 255947 NR_110267 101927619 Hs.632942 NR_110267 LINC01923 - long intergenic non-protein coding RNA 1923 ncRNA 154.615-14 chr9 74807607 74807811 + 0.846154 NA intron (NM_017662, intron 14 of 38) A-rich|Low_complexity|Low_complexity 79638 NM_001177311 140803 Hs.272225 NM_017662 ENSG00000119121 TRPM6 CHAK2|HMGX|HOMG|HOMG1|HSH transient receptor potential cation channel subfamily M member 6 protein-coding 182-5 chr8 120433806 120434142 + 0.846154 NA intron (NM_014078, intron 2 of 6) intron (NM_014078, intron 2 of 6) 11176 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding 194.154-4 chr2 137184520 137184914 + 0.846154 NA intron (NM_001316349, intron 7 of 27) intron (NM_001316349, intron 7 of 27) 419172 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 177.462-3 chr5 68706236 68706481 + 0.846154 NA Intergenic Intergenic 323569 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA 171.077-3 chr12 118107541 118107745 + 0.846154 NA Intergenic AluSz|SINE|Alu -3632 NM_019086 54621 Hs.187624 NM_019086 ENSG00000176834 VSIG10 - V-set and immunoglobulin domain containing 10 protein-coding 174.538 chr14 54643495 54643776 + 0.846154 NA intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 76023 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding 164.615-2 chr10 57304242 57304596 + 0.846154 NA TTS (NR_037490) TTS (NR_037490) 140 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 190.231 chr10 58328467 58328746 + 0.846154 NA non-coding (NR_158219, exon 1 of 1) non-coding (NR_158219, exon 1 of 1) 1073 NR_158219 112268068 Hs.586671 NR_158219 LOC112268068 - uncharacterized LOC112268068 ncRNA 160.615-6 chr14 65466872 65467253 + 0.846154 NA intron (NM_004480, intron 2 of 9) L1MCa|LINE|L1 -4040 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA 156.308-5 chr2 45420090 45420436 + 0.846154 NA intron (NM_018079, intron 16 of 20) MER5A|DNA|hAT-Charlie -165322 NR_033831 400952 Hs.468368 NR_033831 ENSG00000205054 LINC01121 UNQ6975 long intergenic non-protein coding RNA 1121 ncRNA 197.538-3 chr4 154516194 154516491 + 0.846154 NA Intergenic Intergenic -24543 NM_001358235 54798 Hs.655664 NM_017639 ENSG00000197410 DCHS2 CDH27|CDHJ|CDHR7|PCDH23|PCDHJ dachsous cadherin-related 2 protein-coding 215.154 chr7 95171653 95171960 + 0.846154 NA intron (NM_017650, intron 5 of 15) L1ME1|LINE|L1 152726 NM_000446 5444 Hs.370995 NM_000446 ENSG00000005421 PON1 ESA|MVCD5|PON paraoxonase 1 protein-coding 166.384 chr2 79150766 79151129 + 0.846154 NA Intergenic L1PA15|LINE|L1 8806 NM_138937 5068 Hs.567312 NM_002580 ENSG00000172016 REG3A HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3 regenerating family member 3 alpha protein-coding 213.539 chr5 94462197 94462519 + 0.846154 NA intron (NM_001145678, intron 12 of 20) intron (NM_001145678, intron 12 of 20) 156246 NM_001145678 285600 Hs.425123 NM_173665 ENSG00000185261 KIAA0825 C5orf36 KIAA0825 protein-coding 204.539-2 chr17 13481422 13481786 + 0.846154 NA Intergenic MSTA-int|LTR|ERVL-MaLR 62042 NR_031679 100302287 NR_031679 ENSG00000221698 MIR548H3 MIR548H-3|MIRN548H3|hsa-mir-548h-3 microRNA 548h-3 ncRNA 222.231-2 chr4 67574135 67574790 + 0.846154 NA intron (NM_012108, intron 2 of 8) MER63D|DNA|hAT-Blackjack 15735 NM_001317769 26228 Hs.435579 NM_012108 ENSG00000035720 STAP1 BRDG1|STAP-1 signal transducing adaptor family member 1 protein-coding 158.461-2 chr2 153684336 153684610 + 0.846154 NA Intergenic Intergenic -187449 NM_052917 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding 155.846-10 chr5 19674222 19674545 + 0.846154 NA intron (NM_001349562, intron 5 of 13) intron (NM_001349562, intron 5 of 13) 211889 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 213.308-4 chr2 59479889 59480211 + 0.846154 NA Intergenic L1MA8|LINE|L1 262342 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 163.462-2 chr12 12516754 12517170 + 0.846154 NA intron (NM_030640, intron 3 of 6).2 intron (NM_030640, intron 3 of 6).2 45901 NM_030640 80824 Hs.536535 NM_030640 ENSG00000111266 DUSP16 MKP-7|MKP7 dual specificity phosphatase 16 protein-coding 152.154-2 chr11 101351252 101351506 + 0.846154 NA Intergenic L1ME3G|LINE|L1 168526 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA 253.615 chr2 190166655 190167354 + 0.846154 NA intron (NM_001042521, intron 2 of 2) L1MEd|LINE|L1 -13859 NM_032321 84281 Hs.389311 NM_032321 ENSG00000187699 C2orf88 smAKAP chromosome 2 open reading frame 88 protein-coding 189.462 chr1 246837622 246837882 + 0.846154 NA Intergenic Tigger7|DNA|TcMar-Tigger 48135 NR_015422 149134 Hs.720494 NM_207326 LINC01341 - long intergenic non-protein coding RNA 1341 ncRNA 178.231-2 chr2 228954090 228954527 + 0.846154 NA Intergenic Intergenic 277784 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 187.384 chr14 68454139 68454552 + 0.846154 NA intron (NM_133509, intron 9 of 10) L1M4|LINE|L1 174442 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 261.154 chr17 60540851 60541387 + 0.846154 NA Intergenic (ATATATG)n|Simple_repeat|Simple_repeat -14877 NM_006380 10513 Hs.84084 NM_006380 ENSG00000062725 APPBP2 APP-BP2|HS.84084|PAT1 amyloid beta precursor protein binding protein 2 protein-coding 171.462-4 chr21 30450824 30451144 + 0.846154 NA Intergenic Intergenic 10705 NM_181623 254950 Hs.553654 NM_181623 ENSG00000186970 KRTAP15-1 KAP15.1 keratin associated protein 15-1 protein-coding 189.385-3 chr3 63305370 63305673 + 0.846154 NA intron (NM_001130003, intron 2 of 5) intron (NM_001130003, intron 2 of 5) 27213 NM_001130003 132204 Hs.648668 NM_144642 ENSG00000163630 SYNPR SPO synaptoporin protein-coding 219.385 chr14 37071473 37071870 + 0.846154 NA intron (NM_001171170, intron 1 of 10) intron (NM_001171170, intron 1 of 10) -100355 NR_033240 100129794 Hs.601579 NR_033240 ENSG00000258708 SLC25A21-AS1 - SLC25A21 antisense RNA 1 ncRNA 176.308-7 chr4 63455137 63455370 + 0.846154 NA Intergenic Intergenic 954197 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 220.615-2 chr15 64301059 64301846 + 0.846154 NA intron (NM_001329606, intron 1 of 11) intron (NM_001329606, intron 1 of 11) 54721 NM_001329605 53944 Hs.646508 NM_022048 ENSG00000169118 CSNK1G1 CK1gamma1 casein kinase 1 gamma 1 protein-coding 240.231 chr3 176167846 176168329 + 0.846154 NA Intergenic L1MEd|LINE|L1 -76464 NR_031687 100302204 NR_031687 ENSG00000221737 MIR548I1 MIR548I-1|MIRN548I1|hsa-mir-548i-1|mir-548i-1 microRNA 548i-1 ncRNA 161.846-4 chr2 13367271 13367478 + 0.846154 NA Intergenic L1MA2|LINE|L1 -360361 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 264.769 chr12 89973355 89973827 + 0.846154 NA Intergenic MER2|DNA|TcMar-Tigger 25898 NR_135019 105369891 Hs.148998 NR_135019 ENSG00000257725 LINC02399 - long intergenic non-protein coding RNA 2399 ncRNA 156.846-3 chr5 41309977 41310252 + 0.846154 NA 3' UTR (NM_001005473, exon 3 of 3) 3' UTR (NM_001005473, exon 3 of 3) -48645 NM_001115131 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding 211.923 chr16 13689877 13690277 + 0.846154 NA Intergenic Intergenic -230080 NM_005236 2072 Hs.567265 NM_005236 ENSG00000175595 ERCC4 ERCC11|FANCQ|RAD1|XFEPS|XPF ERCC excision repair 4, endonuclease catalytic subunit protein-coding 170.231-6 chr14 52948713 52949057 + 0.846154 NA intron (NM_006832, intron 2 of 14) intron (NM_006832, intron 2 of 14) 2165 NM_006832 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding 186.539 chr2 143597532 143597833 + 0.846154 NA intron (NM_018460, intron 11 of 13) intron (NM_018460, intron 11 of 13) -339385 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 199.615-3 chr2 112894695 112895062 + 0.846154 NA Intergenic L1MD2|LINE|L1 -18093 NM_014439 27178 Hs.166371 NM_014439 ENSG00000125571 IL37 FIL1|FIL1(ZETA)|FIL1Z|IL-1F7|IL-1H|IL-1H4|IL-1RP1|IL-37|IL1F7|IL1H4|IL1RP1 interleukin 37 protein-coding 174.462-4 chr5 167873601 167873818 + 0.846154 NA intron (NM_001080428, intron 1 of 24) intron (NM_001080428, intron 1 of 24) 118780 NM_001080428 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding 194.769 chr1 222647882 222648242 + 0.846154 NA intron (NM_001300867, intron 2 of 22) intron (NM_001300867, intron 2 of 22) 3759 NM_001300867 375056 Hs.118474 NM_198551 ENSG00000154305 MIA3 ARNT|D320|TANGO|TANGO1|UNQ6077 MIA SH3 domain ER export factor 3 protein-coding 199.846-2 chr12 3264696 3265080 + 0.846154 NA intron (NM_001168320, intron 2 of 7) MIRb|SINE|MIR 101234 NR_148995 100128253 Hs.447497 NR_148995 LOC100128253 - uncharacterized LOC100128253 ncRNA 190.077-2 chr8 62018308 62018647 + 0.846154 NA Intergenic Intergenic 128638 NR_149085 111082988 Hs.521600 NR_149085 ENSG00000254120 LINC02155 - long intergenic non-protein coding RNA 2155 ncRNA 184.154-4 chr2 24648072 24648446 + 0.846154 NA intron (NM_001362950, intron 4 of 23) intron (NM_001362950, intron 4 of 23) 63782 NM_147233 8648 Hs.596314 NM_003743 ENSG00000084676 NCOA1 F-SRC-1|KAT13A|RIP160|SRC1|bHLHe42|bHLHe74 nuclear receptor coactivator 1 protein-coding 163-4 chr6 145487516 145487823 + 0.846154 NA Intergenic L1PA12|LINE|L1 199208 NM_001368132 7957 Hs.486696 NM_005670 ENSG00000112425 EPM2A EPM2|MELF EPM2A glucan phosphatase, laforin protein-coding 156.923 chr1 50134758 50135042 + 0.846154 NA intron (NM_001324217, intron 1 of 3) intron (NM_001324217, intron 1 of 3) 25067 NM_001324217 1996 Hs.213050 NM_021952 ENSG00000162374 ELAVL4 HUD|PNEM ELAV like RNA binding protein 4 protein-coding 184.462-3 chr5 58533695 58534354 + 0.846154 NA Intergenic MIR|SINE|MIR -3915 NR_039639 100616339 NR_039639 ENSG00000265699 MIR548AE2 - microRNA 548ae-2 ncRNA 153.154-3 chr20 57463468 57464068 + 0.846154 NA Intergenic Intergenic 61099 NM_001269044 140690 Hs.131543 NM_080618 ENSG00000124092 CTCFL BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 CCCTC-binding factor like protein-coding 210.308-4 chr15 24981529 24981931 + 0.846154 NA promoter-TSS (NR_001293) promoter-TSS (NR_001293) -264 NR_001293 91380 NR_001293 ENSG00000276314 SNORD107 HBII-436 small nucleolar RNA, C/D box 107 snoRNA 240.154 chr16 35413660 35414042 + 0.846154 NA Intergenic Intergenic 50320 NR_027079 283914 Hs.385772 NR_027079 ENSG00000259841 LINC01566 - long intergenic non-protein coding RNA 1566 ncRNA 204.692-2 chr5 65714914 65715186 + 0.846154 NA intron (NM_019072, intron 2 of 10) intron (NM_019072, intron 2 of 10) 7059 NM_019072 54557 Hs.482301 NM_019072 ENSG00000197860 SGTB SGT2 small glutamine rich tetratricopeptide repeat containing beta protein-coding 158.462-10 chr8 87494687 87494945 + 0.846154 NA Intergenic L1MC1|LINE|L1 379199 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 218.308 chr2 82220245 82220692 + 0.846154 NA Intergenic Intergenic -636335 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo 155.077-13 chr5 67262338 67262552 + 0.846154 NA Intergenic Tigger3a|DNA|TcMar-Tigger -65646 NM_005582 4064 Hs.87205 NM_005582 ENSG00000134061 CD180 LY64|Ly78|RP105 CD180 molecule protein-coding 161.846-2 chr13 53292251 53292506 + 0.846154 NA Intergenic Intergenic -140478 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA 194.154-7 chr5 83717445 83717725 + 0.846154 NA intron (NM_001884, intron 1 of 4) intron (NM_001884, intron 1 of 4) 3270 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding 247.539 chr10 92857794 92858441 + 0.846154 NA intron (NM_001319195, intron 1 of 21) L1M4b|LINE|L1 9597 NM_001319195 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding 246.077 chr5 29884213 29884966 + 0.846154 NA Intergenic L1MA10|LINE|L1 4029 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 194.615-5 chr3 166989578 166989994 + 0.846154 NA Intergenic HERVL-int|LTR|ERVL 91103 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA 176 chr1 210551796 210552051 + 0.846154 NA intron (NM_001122834, intron 9 of 11) intron (NM_001122834, intron 9 of 11) 222557 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding 166.615-6 chr4 37006667 37007002 + 0.846154 NA intron (NR_134669, intron 1 of 1) L1ME3B|LINE|L1 5055 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA 160.385-7 chr5 93920442 93920663 + 0.846154 NA intron (NR_028080, intron 4 of 8) Tigger2|DNA|TcMar-Tigger -178952 NM_153216 134187 Hs.678995 NM_153216 ENSG00000248483 POU5F2 SPRM-1 POU domain class 5, transcription factor 2 protein-coding 174.461-2 chr6 162942030 162942361 + 0.846154 NA intron (NM_001080379, intron 2 of 4) intron (NM_001080379, intron 2 of 4) 111966 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA 169-6 chr2 43470441 43470837 + 0.846154 NA intron (NM_001083953, intron 26 of 37) L1ME4c|LINE|L1 125335 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding 277.539 chr21 28216211 28217056 + 0.846154 NA intron (NR_126012, intron 2 of 5) intron (NR_126012, intron 2 of 5) 12034 NR_126012 101927973 Hs.570414 NR_126012 ENSG00000236532 LINC01695 - long intergenic non-protein coding RNA 1695 ncRNA 207.077 chr12 269465 269945 + 0.846154 NA Intergenic MIR3|SINE|MIR -6832 NM_001190997 6540 Hs.504398 NM_016615 ENSG00000010379 SLC6A13 GAT-2|GAT2|GAT3 solute carrier family 6 member 13 protein-coding 203.769-2 chr18 13197568 13198023 + 0.846154 NA Intergenic Intergenic -20965 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 153.308-2 chr3 177655555 177655787 + 0.846154 NA intron (NR_047568, intron 3 of 3) intron (NR_047568, intron 3 of 3) -161194 NR_110826 102724550 Hs.570526 NR_110826 ENSG00000231574 LINC02015 KCCAT211 long intergenic non-protein coding RNA 2015 ncRNA 180.308 chr14 75072892 75073124 + 0.846154 NA intron (NM_024643, intron 2 of 2) intron (NM_024643, intron 2 of 2) 3367 NM_024643 79696 Hs.48642 NM_024643 ENSG00000119703 ZC2HC1C C14orf140|FAM164C zinc finger C2HC-type containing 1C protein-coding 193.615-6 chr8 80968040 80968443 + 0.846154 NA 3' UTR (NM_018440, exon 9 of 9) 3' UTR (NM_018440, exon 9 of 9) -93460 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding 239.538-2 chr8 130868994 130869394 + 0.846154 NA intron (NM_001115, intron 8 of 17) intron (NM_001115, intron 8 of 17) 171715 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 176.923-9 chr5 161969171 161969531 + 0.846154 NA intron (NR_126372, intron 1 of 2) intron (NR_126372, intron 1 of 2) 31845 NR_126372 104326188 NR_126372 LINC01202 - long intergenic non-protein coding RNA 1202 ncRNA 180.615-4 chr7 4609333 4609841 + 0.846154 NA Intergenic Intergenic -72708 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 171.077-6 chr2 27996333 27996620 + 0.846154 NA TTS (NR_036230) TTS (NR_036230) 109 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA 241.692-2 chr8 113415007 113415334 + 0.846154 NA intron (NM_001363185, intron 1 of 66) intron (NM_001363185, intron 1 of 66) 21769 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 160.692-4 chr4 87901190 87901475 + 0.846154 NA Intergenic Intergenic 66629 NM_001291183 56955 Hs.676357 NM_020203 ENSG00000152595 MEPE OF45 matrix extracellular phosphoglycoprotein protein-coding 170.231-7 chr5 38065964 38066328 + 0.846154 NA intron (NR_147009, intron 2 of 2) MIR|SINE|MIR 40449 NR_147009 105374731 Hs.570981 NR_147009 ENSG00000248461 LINC02107 - long intergenic non-protein coding RNA 2107 ncRNA 175.384-3 chr2 204709916 204710255 + 0.846154 NA intron (NM_205863, intron 2 of 21) intron (NM_205863, intron 2 of 21) 164610 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding 201.846-2 chr1 109720983 109721444 + 0.846154 NA Intergenic MLT1J2|LTR|ERVL-MaLR 8962 NM_000851 2949 Hs.75652 NM_000851 ENSG00000134201 GSTM5 GSTM5-5|GTM5 glutathione S-transferase mu 5 protein-coding 193.231-3 chr1 184179208 184179534 + 0.846154 NA Intergenic Intergenic 127641 NM_001300764 116461 Hs.548197 NM_052965 ENSG00000198860 TSEN15 C1orf19|PCH2F|sen15 tRNA splicing endonuclease subunit 15 protein-coding 191.615 chr1 63760551 63760903 + 0.846154 NA Intergenic L1ME1|LINE|L1 -13290 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding 206.769-2 chr18 73257873 73258303 + 0.846154 NA intron (NR_034133, intron 1 of 5) intron (NR_034133, intron 1 of 5) 6410 NR_034133 400655 Hs.579378 NR_034133 ENSG00000263711 LOC400655 - uncharacterized LOC400655 ncRNA 188.692-2 chr10 20175053 20175480 + 0.846154 NA intron (NM_032812, intron 7 of 13) MIR|SINE|MIR 358834 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding 189.308 chr10 10901832 10902061 + 0.846154 NA intron (NM_001326328, intron 2 of 15) L1ME1|LINE|L1 50217 NR_015413 254312 Hs.498620 NR_015413 ENSG00000229240 LINC00710 - long intergenic non-protein coding RNA 710 ncRNA 169.385-2 chr17 59637925 59638242 + 0.846154 NA intron (NM_001288653, intron 1 of 31) intron (NM_001288653, intron 1 of 31) 18188 NM_004859 1213 Hs.491351 NM_004859 ENSG00000141367 CLTC CHC|CHC17|CLH-17|CLTCL2|Hc|MRD56 clathrin heavy chain protein-coding 172.385 chr12 4609330 4609698 + 0.846154 NA intron (NM_001371301, intron 12 of 14) intron (NM_001371301, intron 12 of 14) 4651 NM_001282285 8798 Hs.439530 NM_003845 ENSG00000010219 DYRK4 - dual specificity tyrosine phosphorylation regulated kinase 4 protein-coding 244.615 chr4 85398436 85398932 + 0.846154 NA Intergenic Intergenic -76466 NM_001025616 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding 229.923 chr2 128353280 128353568 + 0.846154 NA Intergenic AluSx1|SINE|Alu -34556 NM_004807 9394 Hs.512841 NM_004807 ENSG00000136720 HS6ST1 HH15|HS6ST heparan sulfate 6-O-sulfotransferase 1 protein-coding 164.923-9 chr5 127172581 127173117 + 0.846154 NA Intergenic Intergenic -99357 NM_001164479 401207 Hs.49573 NM_001164478 ENSG00000164241 C5orf63 YDR286C chromosome 5 open reading frame 63 protein-coding 190.308-3 chr2 65055132 65055573 + 0.846154 NA Intergenic Intergenic -1064 NM_015147 23177 Hs.709257 NM_015147 ENSG00000011523 CEP68 KIAA0582 centrosomal protein 68 protein-coding 168.077-7 chr4 55139338 55139692 + 0.846154 NA Intergenic Intergenic -13920 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding 185.077 chr11 105792853 105793151 + 0.846154 NA intron (NR_046356, intron 3 of 16) intron (NR_046356, intron 3 of 16) 182296 NR_046356 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding 196.308 chr14 29375992 29376416 + 0.846154 NA Intergenic Intergenic 550892 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding 192.077 chr7 4114560 4114978 + 0.846154 NA intron (NM_152744, intron 25 of 44) MLT1J2|LTR|ERVL-MaLR -14916 NM_001079653 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 158.308-8 chr2 183726006 183726211 + 0.846154 NA Intergenic MER4A|LTR|ERV1 601665 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding 203.308-3 chr5 17266706 17266957 + 0.846154 NA intron (NM_006317, intron 1 of 1) AluSx|SINE|Alu 49200 NM_006317 10409 Hs.201641 NM_006317 ENSG00000176788 BASP1 CAP-23|CAP23|NAP-22|NAP22 brain abundant membrane attached signal protein 1 protein-coding 203 chr4 72900003 72900470 + 0.846154 NA Intergenic MER44C|DNA|TcMar-Tigger 169480 NM_001297733 285521 Hs.356697 NM_173827 ENSG00000163626 COX18 COX18HS cytochrome c oxidase assembly factor COX18 protein-coding 170.923-3 chr12 73112581 73113122 + 0.846154 NA Intergenic Intergenic -46339 NR_110130 101928137 Hs.694666 NR_110130 ENSG00000258123 LINC02444 - long intergenic non-protein coding RNA 2444 ncRNA 164.077-7 chr9 91603493 91603760 + 0.846154 NA Intergenic MER21C|LTR|ERVL -32625 NR_037472 100500821 NR_037472 ENSG00000266855 MIR3910-1 mir-3910-1 microRNA 3910-1 ncRNA 249.077 chr21 28157162 28157597 + 0.846154 NA intron (NR_126012, intron 5 of 5) intron (NR_126012, intron 5 of 5) 66976 NR_126011 284825 Hs.651529 NR_126010 ENSG00000232079 LINC01697 - long intergenic non-protein coding RNA 1697 ncRNA 176.923-11 chr6 156177305 156177636 + 0.846154 NA Intergenic L1MA9|LINE|L1 -201280 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA 161.462-6 chr9 129810542 129810748 + 0.846154 NA non-coding (NR_134113, exon 5 of 5) non-coding (NR_134113, exon 5 of 5) 7461 NM_014506 27348 Hs.252682 NM_014506 ENSG00000136816 TOR1B DQ1 torsin family 1 member B protein-coding 218.462 chr14 39832921 39833342 + 0.846154 NA Intergenic Intergenic -400631 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 181.308 chr1 188409511 188409878 + 0.846154 NA Intergenic Intergenic 966066 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 182.308-8 chr9 17061049 17061295 + 0.846154 NA Intergenic Intergenic -73868 NM_001365029 54875 Hs.435381 NM_017738 ENSG00000044459 CNTLN C9orf101|C9orf39|bA340N12.1 centlein protein-coding 183.308-5 chr5 105783984 105784378 + 0.846154 NA Intergenic Intergenic 684707 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 236.461 chr3 89765696 89766108 + 0.846154 NA Intergenic Intergenic 658281 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 180.308-9 chr8 130021677 130021952 + 0.846154 NA Intergenic Intergenic -4685 NM_001353269 51571 Hs.126941 NM_016623 ENSG00000153310 FAM49B BM-009|L1 family with sequence similarity 49 member B protein-coding 169.385 chr13 111396145 111396470 + 0.846154 NA Intergenic Intergenic 75665 NM_152324 121793 Hs.210677 NM_152324 ENSG00000153495 TEX29 C13orf16|bA474D23.1 testis expressed 29 protein-coding 197.385 chr11 96179500 96179835 + 0.846154 NA intron (NM_032427, intron 1 of 4) intron (NM_032427, intron 1 of 4) -161771 NR_036125 100422991 NR_036125 ENSG00000266192 MIR1260B mir-1260b microRNA 1260b ncRNA 156.231-4 chr3 64028323 64028709 + 0.846154 NA Intergenic Intergenic -4506 NM_001271780 9861 Hs.152536 NM_014814 ENSG00000163636 PSMD6 Rpn7|S10|SGA-113M|p42A|p44S10 proteasome 26S subunit, non-ATPase 6 protein-coding 159.769-3 chr14 74829156 74829461 + 0.846154 NA exon (NM_019589, exon 19 of 21) exon (NM_019589, exon 19 of 21) 34526 NM_001080408 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding 184.231-3 chr2 154420651 154421157 + 0.846154 NA intron (NM_052917, intron 11 of 12) intron (NM_052917, intron 11 of 12) 36534 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA 223.615 chr2 229801614 229801951 + 0.846154 NA intron (NM_001348330, intron 21 of 41) intron (NM_001348330, intron 21 of 41) -87227 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding 152.923-10 chr20 47736449 47736756 + 0.846154 NA intron (NM_198596, intron 3 of 20) MER113A|DNA|hAT-Charlie 49462 NM_018837 55959 Hs.162016 NM_018837 ENSG00000196562 SULF2 HSULF-2 sulfatase 2 protein-coding 271.538 chr5 55209565 55209914 + 0.846154 NA Intergenic L1MB8|LINE|L1 17576 NM_001190787 345643 Hs.394578 NM_001190787 ENSG00000234602 MCIDAS IDAS|MCI|MCIN multiciliate differentiation and DNA synthesis associated cell cycle protein protein-coding 189.615 chr1 207392651 207393118 + 0.846154 NA Intergenic Charlie17b|DNA|hAT-Charlie -61416 NM_001006658 1380 Hs.445757 NM_001877 ENSG00000117322 CR2 C3DR|CD21|CR|CVID7|SLEB9 complement C3d receptor 2 protein-coding 151.615-13 chr8 8491344 8491572 + 0.846154 NA Intergenic Charlie23a|DNA|hAT-Charlie -105019 NR_163138 157285 Hs.583863 NM_001080826 ENSG00000275342 PRAG1 NACK|PEAK2|PRAGMIN|SGK223 PEAK1 related, kinase-activating pseudokinase 1 protein-coding 176.923-10 chr6 39938816 39939133 + 0.846154 NA Intergenic MSTB|LTR|ERVL-MaLR -4512 NM_001075098 4337 Hs.357128 NM_005942 ENSG00000124615 MOCS1 MIG11|MOCOD|MOCS1A|MOCS1B molybdenum cofactor synthesis 1 protein-coding 161.077-12 chr6 161521606 161521863 + 0.846154 NA intron (NM_004562, intron 9 of 11) intron (NM_004562, intron 9 of 11) 50757 NR_134594 105378098 Hs.691066 NR_134593 LOC105378098 - uncharacterized LOC105378098 ncRNA 159.077-2 chr13 36342224 36342455 + 0.846154 NA intron (NM_001142296, intron 1 of 9) MER58C|DNA|hAT-Charlie 4055 NM_001142296 23111 Hs.440414 NM_015087 ENSG00000133104 SPART SPG20|TAHCCP1 spartin protein-coding 175.539-3 chr2 120173314 120173680 + 0.846154 NA intron (NM_001330310, intron 24 of 24) MER5A|DNA|hAT-Charlie 49903 NM_024121 79134 Hs.376722 NM_024121 ENSG00000226479 TMEM185B FAM11B transmembrane protein 185B protein-coding 237.538-2 chr22 47858030 47858570 + 0.846154 NA Intergenic L1PA6|LINE|L1 226626 NR_122046 284930 Hs.407567 NR_122046 ENSG00000224271 LOC284930 - uncharacterized LOC284930 ncRNA 183.538-3 chr6 94580060 94580404 + 0.846154 NA Intergenic MIR|SINE|MIR 861929 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA 163.384 chr3 105845708 105846047 + 0.846154 NA intron (NR_135807, intron 3 of 20) intron (NR_135807, intron 3 of 20) 21714 NM_001321813 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 198.923 chr15 27194831 27195183 + 0.846154 NA intron (NM_001270873, intron 3 of 5) L1MDa|LINE|L1 -33688 NR_120343 101928869 Hs.585699 NR_120343 ENSG00000228740 GABRG3-AS1 - GABRG3 antisense RNA 1 ncRNA 226.769-3 chr2 160594369 160594769 + 0.846154 NA Intergenic L1MB8|LINE|L1 -100762 NM_016836 5937 Hs.470412 NM_002897 ENSG00000153250 RBMS1 C2orf12|HCC-4|MSSP|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1 RNA binding motif single stranded interacting protein 1 protein-coding 167-2 chr2 143734802 143735413 + 0.846154 NA intron (NM_018460, intron 13 of 13) intron (NM_018460, intron 13 of 13) -201960 NR_110237 101928386 Hs.668251 NR_110237 ENSG00000232377 LOC101928386 - uncharacterized LOC101928386 ncRNA 198.692-2 chr4 70529980 70530422 + 0.846154 NA intron (NM_212557, intron 7 of 8) intron (NM_212557, intron 7 of 8) 11632 NM_212557 401138 Hs.453069 NM_212557 ENSG00000187689 AMTN AI3B|UNQ689 amelotin protein-coding 193.769-3 chr12 24007963 24008318 + 0.846154 NA intron (NM_152989, intron 4 of 17) intron (NM_152989, intron 4 of 17) -57108 NM_001261415 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 195.154-2 chr9 75509497 75509728 + 0.846154 NA Intergenic Intergenic -381032 NM_001190482 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding 213.923 chr11 124975295 124975711 + 0.846154 NA intron (NM_025004, intron 5 of 15) L1ME4a|LINE|L1 21301 NM_025004 80071 Hs.287555 NM_025004 ENSG00000149548 CCDC15 - coiled-coil domain containing 15 protein-coding 164.154-3 chr2 197726131 197726493 + 0.846154 NA TTS (NM_001284362) TTS (NM_001284362) 20943 NM_138395 92935 Hs.744330 NM_138395 ENSG00000247626 MARS2 COXPD25|MetRS|mtMetRS methionyl-tRNA synthetase 2, mitochondrial protein-coding 163.462-3 chr13 64290328 64290606 + 0.846154 NA Intergenic L1MEc|LINE|L1 -214456 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA 173.923 chr10 60049725 60049989 + 0.846154 NA intron (NM_001204403, intron 42 of 43) intron (NM_001204403, intron 42 of 43) -88944 NR_024340 283025 Hs.522955 NM_001017982 ENSG00000235931 LINC01553 C10orf40 long intergenic non-protein coding RNA 1553 ncRNA 206.385 chr10 105603617 105604085 + 0.846154 NA Intergenic L1ME3A|LINE|L1 216482 NR_120625 101927549 Hs.556885 NR_120625 LINC02627 - long intergenic non-protein coding RNA 2627 ncRNA 205.231 chr12 3478995 3479347 + 0.846154 NA intron (NM_001256536, intron 1 of 9) intron (NM_001256536, intron 1 of 9) -12032 NM_019854 56341 Hs.504530 NM_019854 ENSG00000111218 PRMT8 HRMT1L3|HRMT1L4 protein arginine methyltransferase 8 protein-coding 231.385 chr2 56624457 56624824 + 0.846154 NA Intergenic Intergenic -438870 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 228.385 chr21 27454204 27454762 + 0.846154 NA Intergenic Intergenic -267896 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 199.615-4 chr5 17713931 17714481 + 0.846154 NA Intergenic L1MA9|LINE|L1 -58568 NM_001355258 391769 NM_001355258 ENSG00000269466 H3.Y - histone cluster 2, H3c pseudogene protein-coding 185.769-4 chr7 42977699 42978055 + 0.846154 NA Intergenic MSTA|LTR|ERVL-MaLR 45501 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding 162 chr11 9204421 9204853 + 0.846154 NA intron (NR_145966, intron 3 of 21) AluSz6|SINE|Alu 60689 NR_145966 23258 Hs.501857 NM_015213 ENSG00000184014 DENND5A EIEE49|RAB6IP1 DENN domain containing 5A protein-coding 165.231 chr1 218180342 218180857 + 0.846154 NA Intergenic Intergenic -104694 NM_016052 51018 Hs.660109 NM_016052 ENSG00000067533 RRP15 CGI-115|KIAA0507 ribosomal RNA processing 15 homolog protein-coding 157.385-6 chr6 151721707 151722189 + 0.846154 NA intron (NM_001122742, intron 2 of 9) intron (NM_001122742, intron 2 of 9) 31452 NM_001122742 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding 161.077-8 chr4 90922688 90922909 + 0.846154 NA intron (NM_001145065, intron 8 of 10) intron (NM_001145065, intron 8 of 10) 687767 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding 167.231-7 chr5 149982504 149982802 + 0.846154 NA 3' UTR (NM_000112, exon 3 of 3) 3' UTR (NM_000112, exon 3 of 3) 18001 NM_030953 81789 Hs.169333 NM_030953 ENSG00000164296 TIGD6 - tigger transposable element derived 6 protein-coding 190.846-2 chr5 91867529 91867908 + 0.846154 NA Intergenic Intergenic -484401 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 218.385 chr12 119580696 119581102 + 0.846154 NA Intergenic L1ME5|LINE|L1 -12875 NM_001136534 387890 Hs.530965 NM_001136534 ENSG00000224982 TMEM233 DSPB2|IFITMD2 transmembrane protein 233 protein-coding 156.154-9 chr5 39006862 39007350 + 0.846154 NA intron (NM_001285439, intron 3 of 38) intron (NM_001285439, intron 3 of 38) 67293 NM_001285439 253260 Hs.407926 NM_152756 ENSG00000164327 RICTOR AVO3|PIA|hAVO3 RPTOR independent companion of MTOR complex 2 protein-coding 206-2 chr20 39841168 39841447 + 0.846154 NA Intergenic Intergenic -163154 NR_109936 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 195.539-3 chrX 74226480 74226897 + 0.846154 NA intron (NR_028379, intron 5 of 6) AluJb|SINE|Alu -8070 NR_030620 100126317 NR_030620 ENSG00000212027 MIR374B MIRN374B|mir-374b microRNA 374b ncRNA 196.769 chr3 115973109 115973382 + 0.846154 NA intron (NM_001318915, intron 3 of 8) L2|LINE|L2 -68119 NR_145779 109623450 NR_145779 SNORD155 - small nucleolar RNA, C/D box 155 snoRNA 184.385 chr11 27283637 27284222 + 0.846154 NA Intergenic L1MEd|LINE|L1 -63816 NR_125766 103695435 Hs.196133 NR_125766 ENSG00000254560 BBOX1-AS1 - BBOX1 antisense RNA 1 ncRNA 167-5 chr7 54379772 54380073 + 0.846154 NA Intergenic L1MC1|LINE|L1 49225 NR_120515 102723605 Hs.154626 NR_120515 ENSG00000231427 LINC01445 - long intergenic non-protein coding RNA 1445 ncRNA 158.538-7 chr22 24766767 24767180 + 0.846154 NA TTS (NR_001283) TTS (NR_001283) 2472 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo 250.769 chr11 82934577 82934987 + 0.846154 NA TTS (NM_145018) TTS (NM_145018) -33042 NM_001319214 5547 Hs.523936 NM_005040 ENSG00000137509 PRCP HUMPCP|PCP prolylcarboxypeptidase protein-coding 154.308-4 chr2 39168110 39168569 + 0.846154 NA non-coding (NR_144521, exon 11 of 11) non-coding (NR_144521, exon 11 of 11) -47876 NM_005633 6654 Hs.709893 NM_005633 ENSG00000115904 SOS1 GF1|GGF1|GINGF|HGF|NS4|SOS-1 SOS Ras/Rac guanine nucleotide exchange factor 1 protein-coding 195.077-3 chr8 59419135 59419413 + 0.846154 NA Intergenic L1PREC2|LINE|L1 300064 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 225.769 chr16 61826122 61826631 + 0.846154 NA intron (NM_001796, intron 4 of 11) intron (NM_001796, intron 4 of 11) 210062 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 217.077 chr10 48431891 48432315 + 0.846154 NA intron (NM_001323331, intron 12 of 12) L2b|LINE|L2 30491 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding 287.846 chr5 85656532 85657073 + 0.846154 NA Intergenic Intergenic -625642 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 202.769-3 chr19 11628907 11629192 + 0.846154 NA Intergenic AluSp|SINE|Alu 31566 NM_001290084 199692 Hs.526665 NM_145295 ENSG00000198551 ZNF627 - zinc finger protein 627 protein-coding 168.077-8 chr4 62244299 62244551 + 0.846154 NA Intergenic MLT1A|LTR|ERVL-MaLR -82660 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 170.308-3 chr11 28365193 28365447 + 0.846154 NA Intergenic L1PA16|LINE|L1 112228 NR_107035 102466876 NR_107035 ENSG00000273912 MIR8068 hsa-mir-8068 microRNA 8068 ncRNA 175.692-2 chr14 88943265 88943507 + 0.846154 NA Intergenic L2a|LINE|L2 118735 NR_159362 123016 Hs.303055 NM_144596 ENSG00000165533 TTC8 BBS8|RP51 tetratricopeptide repeat domain 8 protein-coding 156.615 chr12 79860449 79860699 + 0.846154 NA intron (NM_001244990, intron 3 of 24) intron (NM_001244990, intron 3 of 24) 53337 NM_001143886 4659 Hs.49582 NM_002480 ENSG00000058272 PPP1R12A M130|MBS|MYPT1 protein phosphatase 1 regulatory subunit 12A protein-coding 262.769 chr4 48165038 48165671 + 0.846154 NA intron (NM_003215, intron 7 of 17) L1MC5a|LINE|L1 -31104 NM_003328 7294 Hs.479669 NM_003328 ENSG00000074966 TXK BTKL|PSCTK5|PTK4|RLK|TKL TXK tyrosine kinase protein-coding 161.846 chr1 196319934 196320247 + 0.846154 NA intron (NR_146057, intron 18 of 26) intron (NR_146057, intron 18 of 26) -231375 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA 169.615-5 chr2 105642196 105642569 + 0.846154 NA Intergenic Intergenic -31823 NR_038891 285000 Hs.737917 NR_038891 LOC285000 - uncharacterized LOC285000 ncRNA 199.077-4 chr8 118872465 118872961 + 0.846154 NA Intergenic Intergenic 79172 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding 177.769-2 chr1 98372070 98372410 + 0.846154 NA Intergenic Intergenic 161529 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA 171.231-3 chr3 185179783 185180229 + 0.846154 NA non-coding (NR_038990, exon 3 of 7) non-coding (NR_038990, exon 3 of 7) 17105 NR_038990 339926 Hs.567848 NR_038990 ENSG00000223358 EHHADH-AS1 - EHHADH antisense RNA 1 ncRNA 202.538-5 chr8 124659584 124660037 + 0.846154 NA intron (NM_001282971, intron 3 of 14) intron (NM_001282971, intron 3 of 14) 68663 NM_001363296 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding 203.692-2 chr11 43154589 43155030 + 0.846154 NA Intergenic SATR1|Satellite|Satellite 114560 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo 175.154-5 chr17 70009001 70009384 + 0.846154 NA Intergenic AluSx1|SINE|Alu -42079 NR_104130 101928141 Hs.639899 NR_104129 ENSG00000267603 LINC01028 TCONS_00025127 long intergenic non-protein coding RNA 1028 ncRNA 155.538-4 chr11 37310061 37310331 + 0.846154 NA Intergenic L1MEc|LINE|L1 -628405 NR_135110 105376633 Hs.135690 NR_135110 ENSG00000254516 LINC02760 - long intergenic non-protein coding RNA 2760 ncRNA 187.539-3 chr5 147190607 147190909 + 0.846154 NA intron (NR_147190, intron 2 of 3) MLT1H|LTR|ERVL-MaLR 44101 NR_147190 105378217 Hs.162649 NR_147190 STK32A-AS1 - STK32A antisense RNA 1 ncRNA 272.692 chr5 111710190 111710577 + 0.846154 NA intron (NR_040093, intron 2 of 6) L1MD1|LINE|L1 45868 NM_001142483 9315 Hs.36053 NM_004772 ENSG00000134986 NREP C5orf13|D4S114|P311|PRO1873|PTZ17|SEZ17 neuronal regeneration related protein protein-coding 196.462 chr10 19139054 19139387 + 0.846154 NA intron (NM_001142308, intron 10 of 39) intron (NM_001142308, intron 10 of 39) 90419 NM_001142308 340895 Hs.646734 NM_001142308 ENSG00000204740 MALRD1 C10orf112|DIET1|bA265G8.2 MAM and LDL receptor class A domain containing 1 protein-coding 165.846-2 chr1 183970356 183970692 + 0.846154 NA intron (NM_015101, intron 4 of 11) intron (NM_015101, intron 4 of 11) 67204 NM_001303421 23127 Hs.387995 NM_015101 ENSG00000198756 COLGALT2 C1orf17|ColGalT 2|GLT25D2 collagen beta(1-O)galactosyltransferase 2 protein-coding 161.615-2 chr10 68263768 68263995 + 0.846154 NA Intergenic LTR16|LTR|ERVL -31768 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding 166.923-5 chr6 91615900 91616211 + 0.846154 NA Intergenic Intergenic 74373 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA 203.923-2 chr20 55056607 55056991 + 0.846154 NA Intergenic Intergenic -366244 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA 177.539 chr11 99623305 99623666 + 0.846154 NA intron (NM_175566, intron 1 of 21) intron (NM_175566, intron 1 of 21) 67340 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 219.846 chr5 20245164 20245502 + 0.846154 NA intron (NM_001291956, intron 2 of 14) intron (NM_001291956, intron 2 of 14) -60218 NR_146519 102725105 NR_146519 CDH18-AS1 - CDH18 antisense RNA 1 ncRNA 163.077-4 chr2 60081734 60082176 + 0.846154 NA Intergenic Intergenic 301081 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 223.923 chr10 24490224 24490816 + 0.846154 NA intron (NM_001282770, intron 2 of 11) intron (NM_001282770, intron 2 of 11) 23989 NM_001282770 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 163.692-2 chr1 221683924 221684310 + 0.846154 NA Intergenic Intergenic 52783 NR_111939 11221 Hs.497822 NM_007207 ENSG00000143507 DUSP10 MKP-5|MKP5 dual specificity phosphatase 10 protein-coding 189.462-2 chr2 130775046 130775294 + 0.846154 NA Intergenic L1MB4|LINE|L1 18826 NM_001105195 205147 Hs.369289 NM_152698 ENSG00000178171 AMER3 FAM123C APC membrane recruitment protein 3 protein-coding 175.154-7 chr8 90861944 90862614 + 0.846154 NA intron (NM_022351, intron 3 of 12) L1ME4b|LINE|L1 70504 NM_022351 64168 Hs.719466 NM_022351 ENSG00000123119 NECAB1 EFCBP1|STIP-1 N-terminal EF-hand calcium binding protein 1 protein-coding 177.385-3 chr12 62171032 62171511 + 0.846154 NA intron (NM_178539, intron 1 of 4) intron (NM_178539, intron 1 of 4) 21568 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding 242.538 chr14 57295897 57296399 + 0.846154 NA non-coding (NR_026895, exon 7 of 7) non-coding (NR_026895, exon 7 of 7) 27177 NR_026895 55745 Hs.597349 NM_018229 ENSG00000053770 AP5M1 C14orf108|MUDENG|Mu5|MuD adaptor related protein complex 5 subunit mu 1 protein-coding 157.769-2 chr17 66168075 66168396 + 0.846154 NA intron (NM_001353129, intron 4 of 26) intron (NM_001353129, intron 4 of 26) 23657 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 165.308-9 chrX 44479527 44479812 + 0.846154 NA Intergenic Intergenic 63190 NM_173794 139341 Hs.7549 NM_173794 ENSG00000069509 FUNDC1 - FUN14 domain containing 1 protein-coding 182.615 chr11 78516476 78516880 + 0.846154 NA intron (NM_024678, intron 6 of 13) intron (NM_024678, intron 6 of 13) -16498 NR_120566 101928896 Hs.659055 NR_120566 ENSG00000255084 LOC101928896 - uncharacterized LOC101928896 ncRNA 221.923 chr14 19865028 19865336 + 0.846154 NA Intergenic Intergenic 3991 NM_001348266 283617 NM_001348266 ENSG00000176290 OR4K3 OR14-10|OR4K3P olfactory receptor family 4 subfamily K member 3 (gene/pseudogene) protein-coding 173.538-4 chr14 25086149 25086524 + 0.846154 NA Intergenic Intergenic -36039 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding 206.231 chr3 95995639 95995906 + 0.846154 NA Intergenic Intergenic -312579 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 177.539-2 chr2 124525369 124525703 + 0.846154 NA intron (NM_130773, intron 9 of 23) intron (NM_130773, intron 9 of 23) 500249 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 204.308 chr2 196720901 196721186 + 0.846154 NA intron (NM_001080539, intron 20 of 27) (TA)n|Simple_repeat|Simple_repeat 7505 NM_001353340 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding 160.538-2 chr2 107480757 107481111 + 0.846154 NA Intergenic L1MEf|LINE|L1 -48485 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA 282.769 chr5 82988343 82988779 + 0.846154 NA Intergenic MamRep38|DNA|hAT 75776 NR_003139 677765 Hs.693283 NR_003139 ENSG00000238835 SCARNA18 SCARNA18A|U109 small Cajal body-specific RNA 18 ncRNA 264.385 chr20 40463963 40464531 + 0.846154 NA Intergenic MIR|SINE|MIR 224989 NM_005461 9935 Hs.169487 NM_005461 ENSG00000204103 MAFB DURS3|KRML|MCTO MAF bZIP transcription factor B protein-coding 212.769-4 chr9 27537334 27537798 + 0.846154 NA Intergenic Intergenic -7752 NM_024761 79817 Hs.369022 NM_024761 ENSG00000120162 MOB3B C9orf35|MOB1D|MOBKL2B MOB kinase activator 3B protein-coding 190.923 chr11 91133325 91133611 + 0.846154 NA Intergenic LTR16C|LTR|ERVL -264266 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 205.462 chr12 338387 338832 + 0.846154 NA intron (NM_001042603, intron 10 of 27) MER68|LTR|ERVL 50711 NM_001042603 5927 Hs.76272 NM_005056 ENSG00000073614 KDM5A RBBP-2|RBBP2|RBP2 lysine demethylase 5A protein-coding 165.231-4 chr2 29533231 29533478 + 0.846154 NA intron (NM_004304, intron 3 of 28) intron (NM_004304, intron 3 of 28) -57977 NR_136317 105374389 Hs.196534 NR_136317 LOC105374389 - uncharacterized LOC105374389 ncRNA 157.462-6 chr5 41079498 41079749 + 0.846154 NA Intergenic Intergenic -8281 NM_173489 133558 Hs.97714 NM_173489 ENSG00000171495 MROH2B HEATR7B2|SPIF maestro heat like repeat family member 2B protein-coding 190.692 chr12 89253350 89253624 + 0.846154 NA Intergenic Intergenic 99014 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 221.231-2 chr8 81841404 81841698 + 0.846154 NA intron (NM_001348189, intron 1 of 9) intron (NM_001348189, intron 1 of 9) 634 NM_152837 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 225.692-8 chr4 30387702 30388186 + 0.846154 NA Intergenic Intergenic -332425 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 165.308-6 chr5 3013711 3014235 + 0.846154 NA Intergenic Intergenic 96119 NR_136207 105374620 Hs.742780 NR_136207 LOC105374620 - uncharacterized LOC105374620 ncRNA 174.308-4 chr12 7850359 7850820 + 0.846154 NA intron (NM_001286237, intron 1 of 9) AluSc|SINE|Alu 22326 NM_153449 144195 Hs.655169 NM_153449 ENSG00000173262 SLC2A14 GLUT14|SLC2A3P3 solute carrier family 2 member 14 protein-coding 179.385 chr4 34465779 34466161 + 0.846154 NA Intergenic MER58B|DNA|hAT-Charlie -196223 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 236.231 chr3 56131688 56132146 + 0.846154 NA intron (NR_132749, intron 6 of 17) L1MA5|LINE|L1 -279323 NR_037502 100500875 NR_037502 ENSG00000264013 MIR3938 - microRNA 3938 ncRNA 164.308-3 chr11 16628309 16628540 + 0.846154 NA intron (NM_001367872, intron 2 of 16) AluSz|SINE|Alu 110053 NM_001367872 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding 160.154-13 chr6 58073041 58073261 + 0.846154 NA Intergenic Intergenic -111705 NR_125728 106660612 Hs.561539 NR_125727 ENSG00000215190 LINC00680 - long intergenic non-protein coding RNA 680 ncRNA 213.692-5 chr20 4775640 4776089 + 0.846154 NA Intergenic LTR1A2|LTR|ERV1 -35196 NR_024268 149830 Hs.126516 NM_177549 ENSG00000180259 PRNT M8 prion locus lncRNA, testis expressed ncRNA 179.461-2 chr3 130990747 130991100 + 0.846154 NA intron (NM_001001485, intron 20 of 27) L2a|LINE|L2 35931 NR_110229 28990 Hs.100878 NM_014065 ENSG00000034533 ASTE1 HT001 asteroid homolog 1 protein-coding 167.308-7 chr5 167532535 167532874 + 0.846154 NA intron (NM_001122679, intron 3 of 29) (TA)n|Simple_repeat|Simple_repeat -40955 NM_001368146 57451 Hs.631957 NM_001080428 ENSG00000145934 TENM2 ODZ2|TEN-M2|TNM2|ten-2 teneurin transmembrane protein 2 protein-coding 162.385-4 chr7 7064588 7064849 + 0.846154 NA Intergenic SATR1|Satellite|Satellite 2327 NR_037454 100500886 NR_037454 ENSG00000266287 MIR3683 - microRNA 3683 ncRNA 152.923-2 chr10 37244997 37245273 + 0.846154 NA Intergenic L1M5|LINE|L1 -64051 NR_104061 101929520 Hs.144151 NR_104061 ENSG00000235687 LINC00993 - long intergenic non-protein coding RNA 993 ncRNA 180.385 chr2 7085506 7085979 + 0.846154 NA Intergenic L1P4a|LINE|L1 -7862 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA 181.923 chr1 198875082 198875591 + 0.846154 NA intron (NR_040073, intron 2 of 2) intron (NR_040073, intron 2 of 2) -16183 NR_029626 406995 NR_029626 ENSG00000207759 MIR181A1 MIR213|MIRN181A1|MIRN213|hsa-mir-181a-1|mir-181a-1|mir-213 microRNA 181a-1 ncRNA 188.077-4 chr8 79169210 79169670 + 0.846154 NA Intergenic MamGypLTR1a|LTR|Gypsy -162748 NR_162137 113219456 NR_162137 MIR12123 - microRNA 12123 ncRNA 174.231-2 chr1 150837910 150838122 + 0.846154 NA intron (NM_001286036, intron 6 of 21) intron (NM_001286036, intron 6 of 21) -29756 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding 204.538 chr10 126091105 126091623 + 0.846154 NA intron (NM_001288974, intron 11 of 18) intron (NM_001288974, intron 11 of 18) -118091 NR_102707 101410540 Hs.557889 NR_102707 ENSG00000233409 FANK1-AS1 - FANK1 antisense RNA 1 ncRNA 159.615-8 chr6 47601327 47601587 + 0.846154 NA intron (NM_012120, intron 13 of 17) intron (NM_012120, intron 13 of 17) -55015 NM_153839 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding 172.615-6 chr20 52353516 52354270 + 0.846154 NA Intergenic L1ME1|LINE|L1 -161908 NM_199427 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding 185.385-3 chr7 124402449 124402931 + 0.846154 NA Intergenic Intergenic -50594 NR_110180 101928211 Hs.131334 NR_110180 LOC101928211 - uncharacterized LOC101928211 ncRNA 189.923-2 chr15 62024020 62024334 + 0.846154 NA intron (NM_001018088, intron 6 of 81) intron (NM_001018088, intron 6 of 81) 36270 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding 172.385-3 chr2 44275793 44276104 + 0.846154 NA exon (NM_000341, exon 1 of 10) exon (NM_000341, exon 1 of 10) 468 NM_000341 6519 Hs.112916 NM_000341 ENSG00000138079 SLC3A1 ATR1|CSNU1|D2H|NBAT|RBAT solute carrier family 3 member 1 protein-coding 158.923-6 chr17 60991650 60991868 + 0.846154 NA intron (NM_001330413, intron 15 of 25) L1MB5|LINE|L1 313908 NM_001353146 54828 Hs.655028 NM_017679 ENSG00000141376 BCAS3 GAOB1|MAAB BCAS3 microtubule associated cell migration factor protein-coding 157.077 chr11 105440437 105440771 + 0.846154 NA Intergenic Intergenic -169469 NM_000829 2893 Hs.503743 NM_000829 ENSG00000152578 GRIA4 GLUR4|GLUR4C|GLURD|GluA4|NEDSGA glutamate ionotropic receptor AMPA type subunit 4 protein-coding 185.846-3 chr14 59043133 59043369 + 0.846154 NA Intergenic (TTTA)n|Simple_repeat|Simple_repeat -145416 NM_001270520 23002 Hs.19156 NM_014992 ENSG00000100592 DAAM1 - dishevelled associated activator of morphogenesis 1 protein-coding 159.846-12 chr8 126334768 126335025 + 0.846154 NA Intergenic Intergenic 9401 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 234.385-2 chr8 136952965 136953390 + 0.846154 NA Intergenic Intergenic 422379 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 192.769-2 chr3 167992696 167993159 + 0.846154 NA Intergenic LTR107_Mam|LTR|LTR 96979 NR_145443 646168 Hs.390443 NR_033843 ENSG00000244227 LRRC77P LINC01330 leucine rich repeat containing 77, pseudogene pseudo 154.154-20 chr6 162103264 162103619 + 0.846154 NA intron (NM_004562, intron 4 of 11) L1M5|LINE|L1 -623691 NM_152410 135138 Hs.25791 NM_152410 ENSG00000112530 PACRG GLUP|HAK005771|PACRG2.1|PARK2CRG parkin coregulated protein-coding 182.231-5 chr8 90993626 90994052 + 0.846154 NA TTS (NM_018710) TTS (NM_018710) -8601 NM_001190972 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding 197.385-5 chr7 10261868 10262417 + 0.846154 NA Intergenic L1ME3A|LINE|L1 -440534 NR_149037 100131472 Hs.170681 NR_149037 LOC100131472 - uncharacterized LOC100131472 ncRNA 161-4 chr2 186736741 186737109 + 0.846154 NA intron (NM_177454, intron 1 of 7) intron (NM_177454, intron 1 of 7) 42865 NM_177454 165215 Hs.28872 NM_177454 ENSG00000144369 FAM171B KIAA1946 family with sequence similarity 171 member B protein-coding 306.923 chr5 124296426 124296900 + 0.846154 NA intron (NR_125774, intron 4 of 5) intron (NR_125774, intron 4 of 5) 141857 NR_125774 103724389 Hs.582211 NR_125774 LINC01170 - long intergenic non-protein coding RNA 1170 ncRNA 213.923-2 chr6 53244426 53244769 + 0.846154 NA Intergenic Intergenic -32396 NR_049866 100847075 NR_049866 ENSG00000264056 MIR5685 - microRNA 5685 ncRNA 163.615-2 chr16 71738798 71739054 + 0.846154 NA intron (NM_001128, intron 21 of 22) intron (NM_001128, intron 21 of 22) -14225 NM_015020 23035 Hs.709458 NM_015020 ENSG00000040199 PHLPP2 PHLPPL|PPM3B PH domain and leucine rich repeat protein phosphatase 2 protein-coding 168.539-2 chr11 34788532 34788870 + 0.846154 NA Intergenic MIR|SINE|MIR -127429 NM_001135024 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding 160.077 chr14 39845546 39845764 + 0.846154 NA Intergenic Intergenic -413155 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 183.308-7 chr9 28250940 28251297 + 0.846154 NA intron (NM_152570, intron 5 of 6) MER67C|LTR|ERV1 468187 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 201.846-3 chr11 111729301 111729668 + 0.846154 NA 3' UTR (NM_015191, exon 15 of 15) 3' UTR (NM_015191, exon 15 of 15) 36905 NM_001177562 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding 172.846-3 chr2 234071960 234072310 + 0.846154 NA intron (NM_006944, intron 7 of 7) intron (NM_006944, intron 7 of 7) 21433 NM_006944 6694 Hs.444488 NM_006944 ENSG00000072080 SPP2 SPP-24|SPP24 secreted phosphoprotein 2 protein-coding 240.769-2 chr2 187303312 187303930 + 0.846154 NA Intergenic Intergenic 144631 NM_001271751 10203 Hs.470882 NM_005795 ENSG00000064989 CALCRL CGRPR|CRLR calcitonin receptor like receptor protein-coding 169-3 chr10 20097528 20097883 + 0.846154 NA intron (NM_032812, intron 4 of 13) intron (NM_032812, intron 4 of 13) 281273 NM_001282736 84898 Hs.99472 NM_032812 ENSG00000120594 PLXDC2 TEM7R plexin domain containing 2 protein-coding 179.692 chr1 66025667 66026287 + 0.846154 NA intron (NM_001037340, intron 1 of 14) intron (NM_001037340, intron 1 of 14) 24741 NR_123718 101927139 Hs.127908 NR_123718 ENSG00000227466 LOC101927139 - uncharacterized LOC101927139 ncRNA 163.923 chr10 17021501 17021874 + 0.846154 NA intron (NM_001081, intron 27 of 66) intron (NM_001081, intron 27 of 66) 108130 NM_001081 8029 Hs.166206 NM_001081 ENSG00000107611 CUBN IFCR|MGA1|gp280 cubilin protein-coding 151.538-2 chr15 67277048 67277351 + 0.846154 NA intron (NM_001031715, intron 3 of 20) L1MCb|LINE|L1 -22001 NM_001271885 79719 Hs.254642 NM_024666 ENSG00000103591 AAGAB KPPP1|PPKP1|PPKP1A|p34 alpha and gamma adaptin binding protein protein-coding 242.846-3 chr4 181945817 181946169 + 0.846154 NA Intergenic Intergenic -116020 NR_147188 105377573 Hs.333288 NR_147188 ENSG00000251336 TEMN3-AS1 - TENM3 antisense transcript 1 ncRNA 157-3 chr11 39216302 39216703 + 0.846154 NA Intergenic Intergenic 567644 NR_120553 101928536 Hs.144776 NR_120553 ENSG00000254562 LINC01493 - long intergenic non-protein coding RNA 1493 ncRNA 156.692-10 chr7 94126719 94127102 + 0.846154 NA Intergenic Intergenic -122555 NM_001317739 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding 176.846-6 chr5 176548094 176548454 + 0.846154 NA intron (NM_001171976, intron 1 of 31) intron (NM_001171976, intron 1 of 31) -1068 NM_017675 54825 Hs.4205 NM_017675 ENSG00000074276 CDHR2 PCDH24|PCLKC cadherin related family member 2 protein-coding 198.538 chr2 192229243 192229695 + 0.846154 NA Intergenic Intergenic -34536 NM_001305134 23671 Hs.144513 NM_016192 ENSG00000144339 TMEFF2 CT120.2|HPP1|TENB2|TPEF|TR|TR-2 transmembrane protein with EGF like and two follistatin like domains 2 protein-coding 154.385-7 chr7 16667495 16667867 + 0.846154 NA intron (NM_001362717, intron 2 of 11) intron (NM_001362717, intron 2 of 11) 6467 NM_001362717 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding 157.462-8 chr8 109454044 109454311 + 0.846154 NA exon (NM_177531, exon 44 of 78) exon (NM_177531, exon 44 of 78) -85523 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding 155.769-7 chr18 52517637 52518032 + 0.846154 NA intron (NM_005215, intron 1 of 28) L1ME3|LINE|L1 177637 NM_005215 1630 Hs.162025 NM_005215 ENSG00000187323 DCC CRC18|CRCR1|HGPPS2|IGDCC1|MRMV1|NTN1R1 DCC netrin 1 receptor protein-coding 167.538-2 chr10 66675030 66675398 + 0.846154 NA intron (NM_001127384, intron 9 of 17) intron (NM_001127384, intron 9 of 17) -250822 NM_178011 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 165.615 chr16 79657408 79657692 + 0.846154 NA Intergenic Intergenic -56813 NM_005360 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 199.692-3 chr20 1141326 1141645 + 0.846154 NA intron (NM_006814, intron 4 of 6) intron (NM_006814, intron 4 of 6) 22883 NM_001323409 9491 Hs.471917 NM_006814 ENSG00000125818 PSMF1 PI31 proteasome inhibitor subunit 1 protein-coding 215.385-2 chr3 89468930 89469286 + 0.846154 NA intron (NM_005233, intron 15 of 16) intron (NM_005233, intron 15 of 16) 361487 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 197.923-3 chr4 80720886 80721227 + 0.846154 NA intron (NM_001206997, intron 4 of 6) L1MEc|LINE|L1 -309652 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding 210.231 chr1 5263800 5264164 + 0.846154 NA Intergenic Intergenic 598759 NR_039838 100616421 NR_039838 ENSG00000264101 MIR4689 mir-4689 microRNA 4689 ncRNA 152.077-7 chr3 27282375 27282617 + 0.846154 NA intron (NM_152534, intron 23 of 38) intron (NM_152534, intron 23 of 38) -65973 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 184.308 chr4 97655321 97655582 + 0.846154 NA intron (NM_174952, intron 10 of 10) intron (NM_174952, intron 10 of 10) 288525 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA 186.923-4 chr18 30158990 30159499 + 0.846154 NA Intergenic Intergenic -139666 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA 159.077-7 chr5 36597844 36598241 + 0.846154 NA Intergenic Intergenic -8313 NM_001289940 6507 Hs.481918 NM_004172 ENSG00000079215 SLC1A3 EA6|EAAT1|GLAST|GLAST1 solute carrier family 1 member 3 protein-coding 186.615 chr5 71979341 71979781 + 0.846154 NA Intergenic L1ME3D|LINE|L1 -127914 NM_005909 4131 Hs.335079 NM_005909 ENSG00000131711 MAP1B FUTSCH|MAP5|PPP1R102 microtubule associated protein 1B protein-coding 151.923-8 chr8 118713315 118713494 + 0.846154 NA intron (NR_038210, intron 3 of 4) L1ME4a|LINE|L1 -91441 NM_001101676 401474 Hs.359393 NM_207506 ENSG00000177570 SAMD12 - sterile alpha motif domain containing 12 protein-coding 213.692-7 chr7 15199972 15200276 + 0.846154 NA TTS (NM_001004320) TTS (NM_001004320) -225266 NM_001350722 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding 170.615-2 chr5 55559461 55559898 + 0.846154 NA Intergenic AluJb|SINE|Alu -24601 NR_103485 8611 Hs.696231 NM_003711 ENSG00000067113 PLPP1 LLP1a|LPP1|PAP-2a|PAP2|PPAP2A phospholipid phosphatase 1 protein-coding 160.462 chr1 104289767 104290120 + 0.846154 NA Intergenic Intergenic 216920 NR_033990 100129138 Hs.514487 NR_033990 ENSG00000215869 LOC100129138 - THAP domain containing 3 pseudogene pseudo 185.385-2 chr5 76244556 76244811 + 0.846154 NA intron (NM_014979, intron 4 of 12) Charlie5|DNA|hAT-Charlie -158602 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 155.462-5 chr6 134046840 134047030 + 0.846154 NA intron (NM_145176, intron 1 of 4) intron (NM_145176, intron 1 of 4) 5689 NM_145176 154091 Hs.486508 NM_145176 ENSG00000146411 SLC2A12 GLUT12|GLUT8 solute carrier family 2 member 12 protein-coding 189.154-3 chr7 3052562 3052898 + 0.846154 NA Intergenic HSMAR2|DNA|TcMar-Mariner -8863 NM_001324281 84433 Hs.648101 NM_032415 ENSG00000198286 CARD11 BENTA|BIMP3|CARMA1|IMD11|IMD11A|PPBL caspase recruitment domain family member 11 protein-coding 178.692-2 chr14 66698278 66698548 + 0.846154 NA intron (NM_001024218, intron 2 of 21) intron (NM_001024218, intron 2 of 21) 191006 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 171.769-6 chr7 20706013 20706406 + 0.846154 NA intron (NM_178559, intron 11 of 18) intron (NM_178559, intron 11 of 18) 58879 NM_001163993 340273 Hs.404102 NM_178559 ENSG00000004846 ABCB5 ABCB5alpha|ABCB5beta|EST422562 ATP binding cassette subfamily B member 5 protein-coding 247.615 chr3 106540962 106541338 + 0.846154 NA Intergenic HERV35I-int|LTR|ERV1 -671749 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 165.462 chr1 199687032 199687317 + 0.846154 NA Intergenic Intergenic -340536 NM_205860 2494 Hs.33446 NM_003822 ENSG00000116833 NR5A2 B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2 nuclear receptor subfamily 5 group A member 2 protein-coding 199.769 chr10 44342196 44342571 + 0.846154 NA Intergenic Intergenic 42714 NM_000609 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 184.846-2 chr10 28852225 28852532 + 0.846154 NA intron (NM_001278522, intron 3 of 4) intron (NM_001278522, intron 3 of 4) 5970 NM_001278522 283080 NM_001278522 C10orf126 bA492M23.1 chromosome 10 open reading frame 126 protein-coding 236.692-2 chr7 42597234 42598080 + 0.846154 NA Intergenic Intergenic 108790 NR_110833 101928795 Hs.566753 NR_110833 ENSG00000238284 LINC01448 - long intergenic non-protein coding RNA 1448 ncRNA 187.923-3 chr14 80763862 80764104 + 0.846154 NA intron (NM_152446, intron 16 of 24) intron (NM_152446, intron 16 of 24) 177755 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding 209.385 chr2 17323122 17323701 + 0.846154 NA Intergenic Intergenic 195029 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding 177.846-3 chr5 23945829 23946201 + 0.846154 NA Intergenic HSMAR2|DNA|TcMar-Mariner -5333 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA 261.538-2 chr13 113992618 113993173 + 0.846154 NA intron (NM_001320821, intron 23 of 25).2 intron (NM_001320821, intron 23 of 25).2 -18819 NM_001365455 100507747 Hs.704267 NM_001365455 ENSG00000283199 C13orf46 - chromosome 13 open reading frame 46 protein-coding 233.308-2 chr2 212273039 212273419 + 0.846154 NA intron (NM_001042599, intron 1 of 26) intron (NM_001042599, intron 1 of 26) 153131 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA 240.308 chr7 70090774 70091117 + 0.846154 NA intron (NM_015570, intron 2 of 18) AluSz|SINE|Alu 492470 NM_001127232 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding 172.231 chr16 8474074 8474354 + 0.846154 NA Intergenic AluSz|SINE|Alu 115624 NM_001146336 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 159.846-10 chr5 98098435 98098792 + 0.846154 NA intron (NR_146477, intron 3 of 4) intron (NR_146477, intron 3 of 4) 62626 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA 196.385-4 chr7 84324980 84325322 + 0.846154 NA Intergenic (TCTA)n|Simple_repeat|Simple_repeat -130362 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding 194.846-2 chr8 110977339 110977589 + 0.846154 NA intron (NR_125417, intron 5 of 5) intron (NR_125417, intron 5 of 5) 49969 NR_125417 101927459 Hs.575543 NR_125416 ENSG00000253877 LINC01608 - long intergenic non-protein coding RNA 1608 ncRNA 177.385-4 chr3 1948679 1949112 + 0.846154 NA Intergenic AluJb|SINE|Alu -149908 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding 212.923 chr2 209100824 209101299 + 0.846154 NA Intergenic L1MC3|LINE|L1 -322986 NM_001363910 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding 179.538-7 chr4 59469022 59469335 + 0.846154 NA Intergenic Intergenic 455605 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 184.846-11 chr9 26039993 26040300 + 0.846154 NA Intergenic Intergenic -26529 NM_001004352 100506422 Hs.533221 NM_001004352 LOC100506422 - putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 protein-coding 229-2 chr2 167944441 167945049 + 0.846154 NA Intergenic Intergenic -3601 NR_131227 105616981 Hs.512811 NR_131227 LOC105616981 - uncharacterized LOC105616981 ncRNA 202.846-4 chr5 41326041 41326507 + 0.846154 NA intron (NM_001005473, intron 2 of 2) intron (NM_001005473, intron 2 of 2) -64805 NM_001115131 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding 154.461-5 chr2 31290617 31290967 + 0.846154 NA Intergenic Intergenic 56640 NM_014600 30845 Hs.368808 NM_014600 ENSG00000013016 EHD3 PAST3 EH domain containing 3 protein-coding 168.769-3 chr11 98471461 98471818 + 0.846154 NA Intergenic MLT1E1|LTR|ERVL-MaLR -549310 NM_014361 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 158.615-10 chr6 56962867 56963268 + 0.846154 NA intron (NM_001318539, intron 1 of 3) MIRb|SINE|MIR 7960 NM_152731 221336 Hs.582993 NM_152731 ENSG00000151917 BEND6 C6orf65 BEN domain containing 6 protein-coding 166-3 chr12 70241322 70241551 + 0.846154 NA TTS (NR_120459) TTS (NR_120459) -1594 NM_001199302 4848 Hs.133350 NM_014515 ENSG00000111596 CNOT2 CDC36|HSPC131|NOT2|NOT2H CCR4-NOT transcription complex subunit 2 protein-coding 158.538-8 chr9 87219782 87219996 + 0.846154 NA Intergenic Intergenic 71245 NR_161226 401535 Hs.657740 NR_161226 C9orf170 - chromosome 9 open reading frame 170 ncRNA 212.154-2 chr7 80909404 80909792 + 0.846154 NA intron (NM_001350121, intron 2 of 18) intron (NM_001350121, intron 2 of 18) 9453 NM_006379 10512 Hs.269109 NM_006379 ENSG00000075223 SEMA3C SEMAE|SemE semaphorin 3C protein-coding 166.231-2 chr19 28192816 28193046 + 0.846154 NA Intergenic MER4A1|LTR|ERV1 -398991 NR_027301 148189 Hs.706547 NR_027301 ENSG00000261824 LINC00662 - long intergenic non-protein coding RNA 662 ncRNA 186-4 chr2 184446890 184447233 + 0.846154 NA Intergenic L1ME3Cz|LINE|L1 68086 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA 204.077-2 chr20 59923020 59923545 + 0.846154 NA intron (NM_014258, intron 2 of 44) intron (NM_014258, intron 2 of 44) 10355 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding 203.538-2 chr16 83679221 83679598 + 0.846154 NA intron (NM_001220489, intron 9 of 12) intron (NM_001220489, intron 9 of 12) 124567 NR_120308 102724163 NR_120308 ENSG00000260228 LOC102724163 - uncharacterized LOC102724163 ncRNA 160.615-4 chr11 125957451 125957674 + 0.846154 NA 3' UTR (NM_001243597, exon 20 of 20) 3' UTR (NM_001243597, exon 20 of 20) 11506 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding 179.692-3 chr10 56502024 56502329 + 0.846154 NA Intergenic Intergenic -140903 NM_032997 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 187.769-5 chr9 125826329 125826849 + 0.846154 NA intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 78406 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding 152.385-4 chr20 34601828 34602079 + 0.846154 NA intron (NM_080476, intron 7 of 11) intron (NM_080476, intron 7 of 11) 43235 NM_032514 84557 Hs.632273 NM_032514 ENSG00000101460 MAP1LC3A ATG8E|LC3|LC3A|MAP1ALC3|MAP1BLC3 microtubule associated protein 1 light chain 3 alpha protein-coding 208.692 chr2 103604763 103605140 + 0.846154 NA Intergenic Intergenic -620522 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 157.692-10 chr8 129834350 129834645 + 0.846154 NA Intergenic HAL1|LINE|L1 -47873 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 162.538 chr15 79514766 79515112 + 0.846154 NA Intergenic Intergenic 82423 NM_015206 23251 Hs.301654 NM_015206 ENSG00000169330 MINAR1 KIAA1024|UBTOR membrane integral NOTCH2 associated receptor 1 protein-coding 211.923-3 chr3 136950574 136950938 + 0.846154 NA 3' UTR (NM_001190796, exon 3 of 3) 3' UTR (NM_001190796, exon 3 of 3) -7227 NM_144717 53833 Hs.61232 NM_144717 ENSG00000174564 IL20RB DIRS1|FNDC6|IL-20R2 interleukin 20 receptor subunit beta protein-coding 180.231-3 chr21 29172589 29172947 + 0.846154 NA intron (NM_001286620, intron 4 of 4) intron (NM_001286620, intron 4 of 4) -20726 NR_027072 193629 Hs.720711 NM_138968 ENSG00000215533 LINC00189 C21orf109|NCRNA00189 long intergenic non-protein coding RNA 189 ncRNA 162.846-8 chr7 45900353 45900574 + 0.846154 NA Intergenic Intergenic 11975 NM_000596 3484 Hs.642938 NM_000596 ENSG00000146678 IGFBP1 AFBP|IBP1|IGF-BP25|PP12|hIGFBP-1 insulin like growth factor binding protein 1 protein-coding 162.154-2 chr17 56425861 56426107 + 0.846154 NA intron (NM_001370326, intron 8 of 20) intron (NM_001370326, intron 8 of 20) -167715 NM_005450 9241 Hs.248201 NM_005450 ENSG00000183691 NOG SYM1|SYNS1|SYNS1A noggin protein-coding 190.692-6 chr9 117583700 117583986 + 0.846154 NA Intergenic Intergenic -64763 NR_109806 101928797 Hs.382317 NR_109806 ENSG00000233569 LOC101928797 - uncharacterized LOC101928797 ncRNA 154.539-2 chrX 153753595 153753917 + 0.846154 NA Intergenic L1MA9|LINE|L1 -10440 NM_001163257 5365 Hs.632833 NM_005393 ENSG00000198753 PLXNB3 PLEXB3|PLEXR|PLXN6 plexin B3 protein-coding 159.154-3 chr12 97271736 97272090 + 0.846154 NA Intergenic Charlie20a|DNA|hAT-Charlie -190863 NR_152618 196475 Hs.652568 NR_024037 ENSG00000255794 RMST LINC00054|NCRMS|NCRNA00054 rhabdomyosarcoma 2 associated transcript ncRNA 190.615-5 chr4 101470087 101470455 + 0.846154 NA Intergenic (TATA)n|Simple_repeat|Simple_repeat 122494 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 259.538-2 chr3 139401675 139402214 + 0.846154 NA intron (NR_121609, intron 1 of 4) L1PA14|LINE|L1 12141 NR_121608 100507291 Hs.97661 NR_121608 ENSG00000248932 LOC100507291 - uncharacterized LOC100507291 ncRNA 177.077 chr11 80618382 80618676 + 0.846154 NA Intergenic MIRb|SINE|MIR 144274 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 213.077-4 chrX 23164285 23164745 + 0.846154 NA intron (NR_073010, intron 2 of 11) intron (NR_073010, intron 2 of 11) 128631 NR_073010 100873065 Hs.628459 NR_046436 PTCHD1-AS DDX53-AS1|PTCHD1AS1|PTCHD1AS2 PTCHD1 antisense RNA (head to head) ncRNA 230.077 chr5 88192398 88193056 + 0.846154 NA intron (NM_001349407, intron 12 of 14) intron (NM_001349407, intron 12 of 14) 76118 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding 197.308-4 chr4 92367978 92368361 + 0.846154 NA intron (NM_001286838, intron 1 of 14) intron (NM_001286838, intron 1 of 14) 63770 NM_001286838 2895 Hs.162727 NM_001510 ENSG00000152208 GRID2 GluD2|SCAR18 glutamate ionotropic receptor delta type subunit 2 protein-coding 276.846-2 chr2 115302776 115303409 + 0.846154 NA intron (NM_001321906, intron 2 of 26) intron (NM_001321906, intron 2 of 26) -6145 NM_020868 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 223.846 chr17 22529782 22530104 + 0.846154 NA Intergenic Intergenic 6832 NM_001190452 100462977 Hs.740185 NM_001190452 ENSG00000256618 MTRNR2L1 HN1 MT-RNR2 like 1 protein-coding 177.461-2 chrX 96937143 96937500 + 0.846154 NA exon (NM_006729, exon 11 of 27) exon (NM_006729, exon 11 of 27) 53413 NM_013347 29935 Hs.659349 NM_013347 ENSG00000204086 RPA4 HSU24186 replication protein A4 protein-coding 194.615-6 chr6 43356012 43356371 + 0.846154 NA intron (NM_014345, intron 3 of 9) intron (NM_014345, intron 3 of 9) 13456 NM_014345 24149 Hs.509718 NM_014345 ENSG00000171467 ZNF318 HRIHFB2436|TZF|ZFP318 zinc finger protein 318 protein-coding 158.923-12 chrX 49171514 49171774 + 0.846154 NA promoter-TSS (NM_002668) promoter-TSS (NM_002668) -254 NM_002668 5355 Hs.77422 NM_002668 ENSG00000102007 PLP2 A4|A4LSB proteolipid protein 2 protein-coding 161.769-3 chr2 161613114 161613423 + 0.846154 NA Intergenic Intergenic -11067 NM_001354450 57282 Hs.333958 NM_022058 ENSG00000144290 SLC4A10 NBCn2|NCBE solute carrier family 4 member 10 protein-coding 167.846 chr10 113511055 113511393 + 0.846154 NA Intergenic L1MB7|LINE|L1 -39607 NM_001177660 3026 Hs.422542 NM_004132 ENSG00000148702 HABP2 FSAP|HABP|HGFAL|NMTC5|PHBP hyaluronan binding protein 2 protein-coding 225.692 chr1 7805351 7805821 + 0.846154 NA intron (NM_001289861, intron 10 of 22) intron (NM_001289861, intron 10 of 22) 21157 NM_001289862 8863 Hs.162200 NM_016831 ENSG00000049246 PER3 FASPS3|GIG13 period circadian regulator 3 protein-coding 159.308 chr13 88055378 88055704 + 0.846154 NA Intergenic Intergenic -87326 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA 223.923-3 chr7 84612682 84613048 + 0.846154 NA Intergenic Intergenic 80389 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA 212-2 chr16 73498738 73499089 + 0.846154 NA Intergenic LTR16|LTR|ERVL 112108 NR_038234 100506172 Hs.434230 NR_038234 ENSG00000258779 LINC01568 - long intergenic non-protein coding RNA 1568 ncRNA 164.692-6 chr5 68039077 68039497 + 0.846154 NA Intergenic Intergenic -150589 NR_105003 102467655 Hs.544102 NR_105003 ENSG00000253787 LINC02219 - long intergenic non-protein coding RNA 2219 ncRNA 158.692-5 chr5 118047489 118047799 + 0.846154 NA intron (NR_104997, intron 2 of 2) L1ME1|LINE|L1 -234930 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA 183.231-2 chr1 159459922 159460267 + 0.846154 NA Intergenic L1MDa|LINE|L1 20372 NM_012351 26476 Hs.532661 NM_012351 ENSG00000196184 OR10J1 HGMP07J|HSHGMP07J olfactory receptor family 10 subfamily J member 1 protein-coding 193.462-3 chr7 85337882 85338206 + 0.846154 NA Intergenic Intergenic -83078 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA 157.846-16 chr7 8617890 8618284 + 0.846154 NA intron (NM_152745, intron 2 of 2) intron (NM_152745, intron 2 of 2) 184478 NM_152745 30010 Hs.487564 NM_152745 ENSG00000122584 NXPH1 NPH1|Nbla00697 neurexophilin 1 protein-coding 166.923-8 chrX 19557496 19557821 + 0.846154 NA intron (NM_001024666, intron 12 of 16) intron (NM_001024666, intron 12 of 16) -42397 NM_001001671 389840 Hs.713701 NM_001001671 ENSG00000180815 MAP3K15 ASK3|bA723P2.3 mitogen-activated protein kinase kinase kinase 15 protein-coding 200.538-2 chr5 101756628 101757046 + 0.846154 NA Intergenic L1M5|LINE|L1 539447 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding 213.462-2 chr20 21384909 21385315 + 0.846154 NA intron (NM_001317960, intron 28 of 29) intron (NM_001317960, intron 28 of 29) 12414 NM_033176 644524 NM_033176 ENSG00000125816 NKX2-4 NKX2.4|NKX2D NK2 homeobox 4 protein-coding 165.769-9 chr2 118734484 118734839 + 0.846154 NA Intergenic L1ME4c|LINE|L1 113522 NM_001426 2019 Hs.271977 NM_001426 ENSG00000163064 EN1 - engrailed homeobox 1 protein-coding 160.308-6 chr4 74782223 74782609 + 0.846154 NA intron (NM_001316963, intron 1 of 4) L1PA11|LINE|L1 12107 NM_001729 685 Hs.591704 NM_001729 ENSG00000174808 BTC - betacellulin protein-coding 251.538 chr2 195841202 195841651 + 0.846154 NA intron (NM_018897, intron 47 of 64) intron (NM_018897, intron 47 of 64) 184200 NM_020342 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding 163.769-5 chr5 53405327 53405685 + 0.846154 NA Intergenic Intergenic -75123 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding 166.538-4 chr6 54217345 54217747 + 0.846154 NA 3' UTR (NM_001281746, exon 12 of 12) 3' UTR (NM_001281746, exon 12 of 12) -90895 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding 169.154 chr1 62174265 62174637 + 0.846154 NA Intergenic AluSp|SINE|Alu -20398 NM_019079 54596 Hs.685462 NM_019079 ENSG00000240563 L1TD1 ECAT11 LINE1 type transposase domain containing 1 protein-coding 153.539-3 chr7 88322022 88322282 + 0.846154 NA Intergenic Intergenic -15258 NM_001205315 79689 Hs.521008 NM_024636 ENSG00000127954 STEAP4 STAMP2|SchLAH|TIARP|TNFAIP9 STEAP4 metalloreductase protein-coding 182.769-4 chr17 62623770 62624419 + 0.846154 NA Intergenic AluJr4|SINE|Alu -3576 NM_006039 9902 Hs.7835 NM_006039 ENSG00000011028 MRC2 CD280|CLEC13E|ENDO180|UPARAP mannose receptor C type 2 protein-coding 154-7 chr5 97918411 97918770 + 0.846154 NA intron (NR_146299, intron 2 of 2) intron (NR_146299, intron 2 of 2) 77832 NR_146299 109729164 NR_146299 LINC02234 - long intergenic non-protein coding RNA 2234 ncRNA 223.769 chr14 49171236 49171725 + 0.846154 NA Intergenic L1MA9|LINE|L1 414900 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 215.846-4 chr8 113423688 113423995 + 0.846154 NA intron (NM_001363185, intron 1 of 66) intron (NM_001363185, intron 1 of 66) 13098 NM_198123 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 266.385-2 chr9 29798706 29799318 + 0.846154 NA Intergenic Intergenic -585411 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 166.769-3 chr10 95446387 95446681 + 0.846154 NA intron (NM_001290295, intron 2 of 24) intron (NM_001290295, intron 2 of 24) -5354 NM_001034954 10580 Hs.38621 NM_006434 ENSG00000095637 SORBS1 CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 sorbin and SH3 domain containing 1 protein-coding 203.154-6 chr8 144984385 144984833 + 0.846154 NA intron (NR_023392, intron 4 of 4) MER2|DNA|TcMar-Tigger -10256 NR_002807 286102 Hs.744580 NR_002807 TMED10P1 S31I125|S31III125|TMED10|TMED10P|TMP21|Tmp-21-I|Tmp21-II|p23|p24delta|p24delta1 transmembrane p24 trafficking protein 10 pseudogene 1 pseudo 169.154-5 chr12 4778340 4778631 + 0.846154 NA Intergenic MER99|DNA|hAT? -30691 NM_002235 3742 Hs.306190 NM_002235 ENSG00000130035 KCNA6 HBK2|KV1.6|PPP1R96 potassium voltage-gated channel subfamily A member 6 protein-coding 304.308-2 chr14 88555241 88555758 + 0.846154 NA promoter-TSS (NM_007039) promoter-TSS (NM_007039) -492 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding 170.231-4 chr11 75150219 75150607 + 0.846154 NA promoter-TSS (NM_001145212) promoter-TSS (NM_001145212) -694 NM_007256 11309 Hs.7884 NM_007256 ENSG00000137491 SLCO2B1 OATP-B|OATP2B1|OATPB|SLC21A9 solute carrier organic anion transporter family member 2B1 protein-coding 154.077 chr17 5637471 5637743 + 0.846154 NA Intergenic AluSx1|SINE|Alu -53098 NM_001033053 22861 Hs.652273 NM_014922 ENSG00000091592 NLRP1 AIADK|CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|MSPC|NAC|NALP1|PP1044|SLEV1|VAMAS1 NLR family pyrin domain containing 1 protein-coding 180.384 chr14 52435197 52435620 + 0.846154 NA intron (NM_001160047, intron 20 of 20) intron (NM_001160047, intron 20 of 20) 117097 NM_020784 57544 Hs.532609 NM_020784 ENSG00000087301 TXNDC16 ERp90|KIAA1344 thioredoxin domain containing 16 protein-coding 164.538-8 chr21 16704700 16705057 + 0.846154 NA Intergenic Intergenic 114641 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA 189.077-4 chr20 9998106 9998481 + 0.846154 NA intron (NR_109861, intron 1 of 1) L1PA3|LINE|L1 11960 NR_109861 101929371 Hs.619265 NR_109861 PARAL1 - PPARG activating RBM14 associated lncRNA 1 ncRNA 164.308 chr1 176370288 176370856 + 0.846154 NA Intergenic L1MA5|LINE|L1 -92603 NM_021936 60676 Hs.187284 NM_020318 ENSG00000116183 PAPPA2 PAPP-A2|PAPP-E|PAPPE|PLAC3 pappalysin 2 protein-coding 164.846-7 chr6 140026294 140026614 + 0.846154 NA intron (NR_121623, intron 1 of 1) L1ME1|LINE|L1 -35193 NR_121624 103352541 Hs.582647 NR_121624 LOC103352541 - uncharacterized LOC103352541 ncRNA 170-7 chr5 131098925 131099177 + 0.846154 NA Intergenic Intergenic 66205 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding 205.307 chr2 57396710 57397208 + 0.846154 NA Intergenic MER52A|LTR|ERV1 -510692 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 168.308-5 chr3 118873365 118873657 + 0.846154 NA Intergenic Intergenic -62678 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA 185.846-2 chr12 20148295 20148713 + 0.846154 NA Intergenic Tigger2|DNA|TcMar-Tigger -20603 NR_146523 105369684 NR_146523 LINC02468 - long intergenic non-protein coding RNA 2468 ncRNA 167.538-4 chr16 85874064 85874434 + 0.846154 NA Intergenic Intergenic -24913 NM_002163 3394 Hs.137427 NM_002163 ENSG00000140968 IRF8 H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8 interferon regulatory factor 8 protein-coding 208.846 chr6 92019713 92020207 + 0.846154 NA Intergenic L1ME4a|LINE|L1 -329532 NR_104154 101929083 Hs.586238 NR_104154 CASC6 - cancer susceptibility 6 ncRNA 168.385-3 chr11 105983474 105983692 + 0.846154 NA Intergenic Intergenic 38657 NM_032424 84437 Hs.266782 NM_032424 ENSG00000170903 MSANTD4 KIAA1826 Myb/SANT DNA binding domain containing 4 with coiled-coils protein-coding 215.692-3 chr5 64367844 64368163 + 0.846154 NA intron (NM_001113561, intron 7 of 7) intron (NM_001113561, intron 7 of 7) -138012 NM_001029875 401190 Hs.657133 NM_001029875 ENSG00000186479 RGS7BP R7BP regulator of G protein signaling 7 binding protein protein-coding 152.077-11 chr6 46776413 46776874 + 0.846154 NA Intergenic L2a|LINE|L2 -16746 NM_005588 4224 Hs.179704 NM_005588 ENSG00000112818 MEP1A PPHA meprin A subunit alpha protein-coding 336.769 chr4 31252348 31252898 + 0.846154 NA Intergenic L2a|LINE|L2 81479 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 159-5 chr4 43451282 43451553 + 0.846154 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 41126 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 173.385-5 chr5 22034767 22035040 + 0.846154 NA intron (NM_004061, intron 5 of 14) MER6B|DNA|TcMar-Tigger -107449 NR_003921 5369 Hs.247975 NM_031887 ENSG00000168967 PMCHL1 - pro-melanin concentrating hormone like 1 (pseudogene) pseudo 154.231 chr11 121764286 121764628 + 0.846154 NA Intergenic Intergenic 312143 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding 203.692 chr1 175392662 175392911 + 0.846154 NA intron (NM_003285, intron 6 of 22) MIR3|SINE|MIR -199799 NM_001319230 9674 Hs.518138 NM_014656 ENSG00000235750 KIAA0040 - KIAA0040 protein-coding 173.385-4 chr2 206710313 206710690 + 0.846154 NA intron (NM_001093730, intron 2 of 11) intron (NM_001093730, intron 2 of 11) 7895 NM_001093730 391475 Hs.640667 NM_001093730 ENSG00000232125 DYTN - dystrotelin protein-coding 178.923-4 chr14 69225513 69225980 + 0.846154 NA intron (NR_034165, intron 4 of 10) intron (NR_034165, intron 4 of 10) 33980 NR_034165 55218 Hs.533878 NM_018199 ENSG00000081177 EXD2 C14orf114|EXDL2 exonuclease 3'-5' domain containing 2 protein-coding 156.615-5 chr2 114440947 114441154 + 0.846154 NA Intergenic L1M5|LINE|L1 -1591 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 204.538-3 chr3 56640883 56641270 + 0.846154 NA intron (NM_001365638, intron 15 of 22) intron (NM_001365638, intron 15 of 22) 22970 NM_015224 23272 Hs.116877 NM_015224 ENSG00000163946 TASOR C3orf63|FAM208A|RAP140|TASOR1|se89-1 transcription activation suppressor protein-coding 159.846-8 chr3 106255174 106255492 + 0.846154 NA Intergenic L1PA16|LINE|L1 -385932 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 152.692-9 chr8 123475861 123476272 + 0.846154 NA Intergenic FLAM_C|SINE|Alu 56077 NM_148177 114907 Hs.403933 NM_058229 ENSG00000156804 FBXO32 Fbx32|MAFbx F-box protein 32 protein-coding 199.231-6 chr6 37989532 37990097 + 0.846154 NA intron (NM_021943, intron 2 of 5) intron (NM_021943, intron 2 of 5) 170087 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding 185.923 chr10 19588237 19588470 + 0.846154 NA intron (NM_001142308, intron 33 of 39) intron (NM_001142308, intron 33 of 39) 140197 NR_120646 101928834 Hs.676482 NR_120646 ENSG00000233968 LOC101928834 - uncharacterized LOC101928834 ncRNA 165.385-12 chr4 57616848 57617110 + 0.846154 NA Intergenic MIRb|SINE|MIR 191107 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 165.154-8 chr8 132067382 132067793 + 0.846154 NA intron (NM_001145095, intron 14 of 15) intron (NM_001145095, intron 14 of 15) -8205 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding 177.384-3 chr8 131001291 131001871 + 0.846154 NA intron (NM_001115, intron 1 of 17) (AT)n|Simple_repeat|Simple_repeat 39328 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 162.923-8 chr7 114039273 114039548 + 0.846154 NA Intergenic L1PA15|LINE|L1 -46917 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding 158.308-4 chr11 80033421 80033730 + 0.846154 NA Intergenic L1MA10|LINE|L1 -592545 NM_001098816 26011 Hs.213087 NM_001098816 ENSG00000149256 TENM4 Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4 teneurin transmembrane protein 4 protein-coding 234.538 chr20 19763870 19764193 + 0.846154 NA Intergenic Intergenic -122490 NM_001242581 54453 Hs.472270 NM_018993 ENSG00000132669 RIN2 MACS|RASSF4 Ras and Rab interactor 2 protein-coding 204.231-2 chr16 83493831 83494172 + 0.846154 NA intron (NM_001220489, intron 6 of 12) intron (NM_001220489, intron 6 of 12) -14345 NR_036147 100422853 NR_036147 ENSG00000263785 MIR3182 mir-3182 microRNA 3182 ncRNA 166.154-9 chr5 54093505 54093946 + 0.846154 NA intron (NM_019087, intron 4 of 4) intron (NM_019087, intron 4 of 4) -142126 NR_030307 693166 NR_030307 ENSG00000207627 MIR581 MIRN581|hsa-mir-581 microRNA 581 ncRNA 153.385 chr11 89510939 89511202 + 0.846154 NA intron (NM_001143837, intron 2 of 20) intron (NM_001143837, intron 2 of 20) -18851 NM_001300995 50507 Hs.371036 NM_016931 ENSG00000086991 NOX4 KOX|KOX-1|RENOX NADPH oxidase 4 protein-coding 215.231-3 chr2 55893354 55893783 + 0.846154 NA intron (NM_001039349, intron 4 of 10) MIRb|SINE|MIR 30214 NM_001039349 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding 215.077-3 chr6 127328258 127328636 + 0.846154 NA intron (NM_001105545, intron 1 of 3) Tigger3c|DNA|TcMar-Tigger 13960 NM_001139510 55862 Hs.486410 NM_018479 ENSG00000093144 ECHDC1 HEL-S-76|MMCD|dJ351K20.2 ethylmalonyl-CoA decarboxylase 1 protein-coding 170.308-7 chr7 26158237 26158583 + 0.846154 NA intron (NM_004289, intron 1 of 3) MLT1C|LTR|ERVL-MaLR 6212 NM_004289 9603 Hs.404741 NM_004289 ENSG00000050344 NFE2L3 NRF3 nuclear factor, erythroid 2 like 3 protein-coding 156.385 chr2 226144873 226145090 + 0.846154 NA intron (NR_046102, intron 1 of 6) intron (NR_046102, intron 1 of 6) 2187 NR_046102 646736 Hs.712836 NR_046102 LOC646736 - uncharacterized LOC646736 ncRNA 152.539-2 chr2 125208565 125209135 + 0.846154 NA Intergenic Intergenic 909135 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 158.846-3 chr3 19888096 19888325 + 0.846154 NA intron (NM_001330688, intron 12 of 14) intron (NM_001330688, intron 12 of 14) 46007 NM_144715 151651 Hs.733920 NM_144715 ENSG00000163576 EFHB CFAP21 EF-hand domain family member B protein-coding 181.846-2 chr10 37984401 37984760 + 0.846154 NA Intergenic L1MEc|LINE|L1 -7933 NR_138063 219749 Hs.499429 NM_145011 ENSG00000175395 ZNF25 KOX19|Zfp9 zinc finger protein 25 protein-coding 158.385-3 chr5 74169358 74169649 + 0.846154 NA Intergenic Intergenic 138822 NR_105009 102503429 Hs.519391 NR_105009 ENSG00000248942 LINC01335 - long intergenic non-protein coding RNA 1335 ncRNA 157.308 chr1 245891040 245891342 + 0.846154 NA intron (NM_022743, intron 8 of 11) L1MA3|LINE|L1 526221 NM_022743 64754 Hs.567571 NM_022743 ENSG00000185420 SMYD3 KMT3E|ZMYND1|ZNFN3A1|bA74P14.1 SET and MYND domain containing 3 protein-coding 170.231-5 chr12 53168663 53169042 + 0.846154 NA intron (NM_001244705, intron 10 of 16) intron (NM_001244705, intron 10 of 16) -4359 NM_001244706 51380 Hs.279815 NM_015989 ENSG00000139631 CSAD CSD|PCAP cysteine sulfinic acid decarboxylase protein-coding 252 chr3 68211268 68211755 + 0.846154 NA intron (NM_001252216, intron 2 of 4) L2a|LINE|L2 207264 NM_213609 407738 Hs.655061 NM_213609 ENSG00000183662 TAFA1 FAM19A1|TAFA-1 TAFA chemokine like family member 1 protein-coding 178.923-6 chr20 71091 71451 + 0.846154 NA Intergenic L1PA13|LINE|L1 -16401 NM_153325 245938 Hs.380220 NM_153325 ENSG00000178591 DEFB125 DEFB-25 defensin beta 125 protein-coding 224 chr4 61418743 61419206 + 0.846154 NA intron (NM_001371343, intron 2 of 23) intron (NM_001371343, intron 2 of 23) 216802 NM_001371342 186.462-3 chr12 29468987 29469243 + 0.846154 NA intron (NM_001353179, intron 16 of 25) L1MC3|LINE|L1 30578 NM_001353179 341350 Hs.674588 NM_183378 ENSG00000187950 OVCH1 OVCH ovochymase 1 protein-coding 174.923-9 chr5 33670831 33671296 + 0.846154 NA intron (NM_001324512, intron 5 of 21) L1MD2|LINE|L1 220927 NM_001324511 81792 Hs.12680 NM_030955 ENSG00000151388 ADAMTS12 PRO4389 ADAM metallopeptidase with thrombospondin type 1 motif 12 protein-coding 240.077 chr14 49497951 49498678 + 0.846154 NA Intergenic Intergenic 88066 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 227.077-2 chr4 35591477 35591969 + 0.846154 NA Intergenic L2a|LINE|L2 652216 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 233.538 chr11 41635780 41636157 + 0.846154 NA Intergenic L1PA15|LINE|L1 -78600 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA 194.692 chr1 41893817 41894157 + 0.846154 NA intron (NR_038261, intron 2 of 3) AluSx1|SINE|Alu 24935 NM_024503 59269 Hs.403972 NM_024503 ENSG00000127124 HIVEP3 KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C human immunodeficiency virus type I enhancer binding protein 3 protein-coding 158.615 chr15 56535180 56535537 + 0.846154 NA Intergenic Tigger3b|DNA|TcMar-Tigger -70221 NM_018365 55329 Hs.444483 NM_018365 ENSG00000138587 MNS1 SPATA40 meiosis specific nuclear structural 1 protein-coding 185.231-8 chr8 125318536 125318864 + 0.846154 NA intron (NM_001349486, intron 5 of 7) L1ME1|LINE|L1 -111658 NM_025195 10221 Hs.444947 NM_025195 ENSG00000173334 TRIB1 C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1 tribbles pseudokinase 1 protein-coding 165.538-3 chr2 78444734 78445158 + 0.846154 NA Intergenic L1M1|LINE|L1 -100585 NR_136311 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA 162.769-7 chr7 17717679 17718050 + 0.846154 NA Intergenic Intergenic -158955 NR_110013 101927630 Hs.583400 NR_110013 ENSG00000236039 LOC101927630 - uncharacterized LOC101927630 ncRNA 181.846-4 chr13 58519430 58519693 + 0.846154 NA Intergenic Intergenic -286444 NR_132367 106144531 Hs.736640 NR_132367 ENSG00000232954 LINC00374 - long intergenic non-protein coding RNA 374 ncRNA 156.846-4 chrX 106366606 106366848 + 0.846154 NA Intergenic Intergenic 198422 NM_152423 139221 Hs.592221 NM_152423 ENSG00000157502 PWWP3B MUM1L1 PWWP domain containing 3B protein-coding 174.538-3 chr9 33079348 33079728 + 0.846154 NA Intergenic AluSz|SINE|Alu -2864 NM_018225 55234 Hs.655351 NM_018225 ENSG00000122692 SMU1 BWD|SMU-1|fSAP57 SMU1 DNA replication regulator and spliceosomal factor protein-coding 297.615 chr9 83398025 83398836 + 0.846154 NA intron (NM_174938, intron 1 of 13) intron (NM_174938, intron 1 of 13) -66469 NM_001244961 257019 Hs.127535 NM_174938 ENSG00000172159 FRMD3 4.1O|EPB41L4O|EPB41LO|P410 FERM domain containing 3 protein-coding 153.846-2 chr10 82114999 82115404 + 0.846154 NA intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 117719 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 171.692-9 chr6 64916001 64916319 + 0.846154 NA intron (NM_001292009, intron 15 of 43) intron (NM_001292009, intron 15 of 43) -385258 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 156.538-3 chr14 49016963 49017253 + 0.846154 NA Intergenic Intergenic 569272 NM_001030001 6235 Hs.156367 NM_001032 ENSG00000213741 RPS29 DBA13|S29|uS14 ribosomal protein S29 protein-coding 155.077-2 chr10 16171265 16171490 + 0.846154 NA Intergenic HERVL-int|LTR|ERVL -265566 NM_001001484 9317 Hs.444321 NM_030664 ENSG00000165983 PTER HPHRP|RPR-1 phosphotriesterase related protein-coding 172.769-5 chr3 9380529 9380804 + 0.846154 NA intron (NM_001114092, intron 7 of 9) intron (NM_001114092, intron 7 of 9) 15957 NR_132781 440944 Hs.598958 NM_001013713 ENSG00000206573 THUMPD3-AS1 SETD5-AS1 THUMPD3 antisense RNA 1 ncRNA 192.615-2 chr2 210593436 210593990 + 0.846154 NA intron (NR_163592, intron 1 of 27) intron (NR_163592, intron 1 of 27) 358 NR_163592 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 212 chr14 60460940 60461309 + 0.846154 NA intron (NM_174978, intron 13 of 17) L1ME4a|LINE|L1 24939 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 207.692-5 chr21 14193665 14194200 + 0.846154 NA intron (NM_001303000, intron 1 of 9) L1MB3|LINE|L1 13017 NM_198996 149998 Hs.139907 NM_145317 ENSG00000188992 LIPI CT17|LPDL|PLA1C|PRED5|mPA-PLA1 beta lipase I protein-coding 199.923-2 chr4 113630026 113630451 + 0.846154 NA intron (NM_001221, intron 3 of 18) intron (NM_001221, intron 3 of 18) 131500 NM_001321572 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding 244.923 chr14 75050000 75050337 + 0.846154 NA intron (NM_014381, intron 1 of 11) intron (NM_014381, intron 1 of 11) 1299 NM_014381 27030 Hs.436650 NM_014381 ENSG00000119684 MLH3 HNPCC7 mutL homolog 3 protein-coding 195.231-4 chr14 73286087 73286383 + 0.846154 NA intron (NM_001005743, intron 9 of 12) AluJr4|SINE|Alu -40234 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA 174.077 chr1 72207553 72207902 + 0.846154 NA intron (NM_173808, intron 1 of 6) intron (NM_173808, intron 1 of 6) 74812 NM_173808 257194 Hs.146542 NM_173808 ENSG00000172260 NEGR1 DMML2433|IGLON4|KILON|Ntra neuronal growth regulator 1 protein-coding 204 chr10 33621530 33621927 + 0.846154 NA Intergenic Intergenic 150952 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 195.462 chr1 96315222 96315587 + 0.846154 NA intron (NR_110693, intron 3 of 5) intron (NR_110693, intron 3 of 5) 58721 NR_110693 101928241 Hs.514137 NR_110693 ENSG00000231987 LINC01787 - long intergenic non-protein coding RNA 1787 ncRNA 192.692-5 chr7 48770179 48770569 + 0.846154 NA Intergenic Intergenic -154173 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 205.308-2 chr3 47772250 47772714 + 0.846154 NA intron (NM_003074, intron 2 of 27) intron (NM_003074, intron 2 of 27) 9411 NM_003074 6599 Hs.476179 NM_003074 ENSG00000173473 SMARCC1 BAF155|CRACC1|Rsc8|SRG3|SWI3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding 192.692-3 chr4 89351482 89351764 + 0.846154 NA Intergenic Intergenic -43823 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding 167.846-6 chr3 34983400 34983707 + 0.846154 NA intron (NR_110817, intron 2 of 3) intron (NR_110817, intron 2 of 3) 410470 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 181.538 chr10 32981241 32981623 + 0.846154 NA Intergenic Intergenic -23202 NM_002211 3688 Hs.643813 NM_002211 ENSG00000150093 ITGB1 CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB integrin subunit beta 1 protein-coding 188.154-2 chr3 176591720 176592006 + 0.846154 NA Intergenic Intergenic 43669 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA 184.154 chr11 91434785 91435122 + 0.846154 NA Intergenic Intergenic -565751 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 182.077 chr1 84610975 84611264 + 0.846154 NA intron (NR_125761, intron 2 of 2) LTR25-int|LTR|ERV1 9912 NR_125761 103695366 Hs.576097 NR_125761 LINC01461 TCONS_00001552 long intergenic non-protein coding RNA 1461 ncRNA 162.615-8 chr8 78748363 78748627 + 0.846154 NA intron (NM_001199886, intron 2 of 4) MER47C|DNA|TcMar-Tigger -24121 NR_077236 101241902 Hs.388511 NR_077236 LOC101241902 - chromosome 4 open reading frame 46 pseudogene pseudo 175.538-3 chr22 24727029 24727326 + 0.846154 NA intron (NM_001008496, intron 16 of 20) intron (NM_001008496, intron 16 of 20) -37324 NR_001283 7152 Hs.381281 NR_001283 TOP1P2 - DNA topoisomerase I pseudogene 2 pseudo 282.231 chr9 102477122 102477569 + 0.846154 NA Intergenic Intergenic -42292 NR_103830 414319 Hs.385790 NR_103830 ENSG00000204250 LINC00587 C9orf107|bA785H23.1 long intergenic non-protein coding RNA 587 ncRNA 163.923-2 chr14 61757608 61757882 + 0.846154 NA Intergenic L1ME3F|LINE|L1 -4675 NM_003082 6617 Hs.179312 NM_003082 ENSG00000023608 SNAPC1 PTFgamma|SNAP43 small nuclear RNA activating complex polypeptide 1 protein-coding 198.923-3 chr2 98005938 98006232 + 0.846154 NA Intergenic Intergenic -10137 NM_015348 23505 Hs.469376 NM_015348 ENSG00000075568 TMEM131 CC28|PRO1048|RW1|YR-23 transmembrane protein 131 protein-coding 178.615 chr1 30560452 30560804 + 0.846154 NA Intergenic L1MEc|LINE|L1 -158144 NR_034182 100129196 Hs.659751 NR_034182 ENSG00000186056 MATN1-AS1 - MATN1 antisense RNA 1 ncRNA 195.769 chr11 127301315 127301740 + 0.846154 NA intron (NR_120580, intron 1 of 2) intron (NR_120580, intron 1 of 2) 30457 NR_120580 101929497 Hs.737442 NR_120580 ENSG00000273409 LINC02712 - long intergenic non-protein coding RNA 2712 ncRNA 166.769-6 chr19 9198719 9199001 + 0.846154 NA Intergenic MIRb|SINE|MIR 13266 NM_175883 162998 Hs.531755 NM_175883 ENSG00000188000 OR7D2 HTPCRH03|OR19-10|OR19-4 olfactory receptor family 7 subfamily D member 2 protein-coding 177.769-3 chr13 106705742 106706115 + 0.846154 NA Intergenic MIRb|SINE|MIR 52048 NR_047026 100874173 Hs.569297 NR_047026 ENSG00000230156 LINC00443 - long intergenic non-protein coding RNA 443 ncRNA 158-2 chr1 64575516 64575732 + 0.846154 NA intron (NM_020925, intron 2 of 26) intron (NM_020925, intron 2 of 26) -4223 NR_039957 100616338 NR_039957 ENSG00000264470 MIR4794 - microRNA 4794 ncRNA 190-5 chr7 53433193 53433829 + 0.846154 NA Intergenic L1ME1|LINE|L1 378420 NR_038371 401337 Hs.531378 NM_001001707 ENSG00000205628 LINC01446 GS1-179L18.1 long intergenic non-protein coding RNA 1446 ncRNA 164.923-4 chr2 174153088 174153297 + 0.846154 NA intron (NM_001011708, intron 3 of 9) intron (NM_001011708, intron 3 of 9) 95340 NM_013341 29789 Hs.157351 NM_013341 ENSG00000138430 OLA1 DOC45|GBP45|GTBP9|GTPBP9|PTD004 Obg like ATPase 1 protein-coding 206.538-2 chr19 28320839 28321229 + 0.846154 NA Intergenic L1PB3|LINE|L1 -285654 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA 154.923-12 chr7 31597618 31597828 + 0.846154 NA intron (NM_194300, intron 8 of 12) L1ME3Cz|LINE|L1 44721 NM_194300 223075 Hs.224269 NM_194300 ENSG00000180347 ITPRID1 CCDC129 ITPR interacting domain containing 1 protein-coding 171.923-3 chr2 13018086 13018514 + 0.846154 NA Intergenic Tigger2|DNA|TcMar-Tigger -11287 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 160.462-6 chr5 23306049 23306426 + 0.846154 NA Intergenic Intergenic -201372 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding 190.923-3 chr16 61598921 61599265 + 0.846154 NA Intergenic Intergenic 437345 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 162.769-9 chr8 117229659 117229942 + 0.846154 NA Intergenic MIRb|SINE|MIR 94805 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 171.154-2 chr14 54410284 54410602 + 0.846154 NA intron (NM_001330173, intron 4 of 8) intron (NM_001330173, intron 4 of 8) 13436 NM_005192 1033 Hs.84113 NM_005192 ENSG00000100526 CDKN3 CDI1|CIP2|KAP|KAP1 cyclin dependent kinase inhibitor 3 protein-coding 166.077-2 chr10 68176223 68176603 + 0.846154 NA intron (NR_045662, intron 12 of 19) intron (NR_045662, intron 12 of 19) 55700 NM_145178 220202 Hs.175396 NM_145178 ENSG00000179774 ATOH7 Math5|NCRNA|PHPVAR|RNANC|bHLHa13 atonal bHLH transcription factor 7 protein-coding 151.923-5 chr20 58259998 58260353 + 0.846154 NA intron (NR_003505, intron 4 of 16) intron (NR_003505, intron 4 of 16) -31522 NM_001304369 140731 Hs.266571 NM_080674 ENSG00000124227 ANKRD60 C20orf86|bA196N14.3 ankyrin repeat domain 60 protein-coding 169.462-5 chr9 100613366 100613700 + 0.846154 NA Intergenic L1MC5a|LINE|L1 35454 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding 226.769 chr11 81760020 81760376 + 0.846154 NA Intergenic Intergenic 130638 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 168.692-4 chr16 52004914 52005269 + 0.846154 NA Intergenic Intergenic 68844 NM_001242473 388276 Hs.534669 NM_001242473 C16orf97 - chromosome 16 open reading frame 97 protein-coding 168.923-7 chr7 95815506 95815968 + 0.846154 NA intron (NM_001135557, intron 4 of 15) intron (NM_001135557, intron 4 of 15) 43231 NM_004411 1780 Hs.440364 NM_004411 ENSG00000158560 DYNC1I1 DNCI1|DNCIC1 dynein cytoplasmic 1 intermediate chain 1 protein-coding 176.231-4 chr5 132957759 132958188 + 0.846154 NA intron (NM_014423, intron 1 of 20) L1MC5|LINE|L1 5661 NM_014423 27125 Hs.519313 NM_014423 ENSG00000072364 AFF4 AF5Q31|CHOPS|MCEF AF4/FMR2 family member 4 protein-coding 234.077-2 chr17 55209747 55210201 + 0.846154 NA Intergenic Intergenic -54986 NM_002126 3131 Hs.196952 NM_002126 ENSG00000108924 HLF - HLF transcription factor, PAR bZIP family member protein-coding 231.616 chr4 34116135 34116483 + 0.846154 NA Intergenic Intergenic -76416 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 155-7 chr7 10103164 10103478 + 0.846154 NA Intergenic L1MA9|LINE|L1 469051 NR_002790 168741 Hs.545134 NR_002790 PER4 - period circadian regulator 3 pseudogene pseudo 245.692 chr3 62201203 62201747 + 0.846154 NA intron (NM_002841, intron 10 of 29) intron (NM_002841, intron 10 of 29) 117472 NR_038283 100506994 Hs.656620 NR_038281 ENSG00000241472 PTPRG-AS1 - PTPRG antisense RNA 1 ncRNA 203-3 chr8 103478082 103478535 + 0.846154 NA Intergenic Intergenic 20923 NR_145706 105375690 NR_145697 LOC105375690 - uncharacterized LOC105375690 ncRNA 293.538 chr8 17197924 17198373 + 0.846154 NA intron (NM_016353, intron 5 of 12) intron (NM_016353, intron 5 of 12) 40984 NM_001362988 51201 Hs.728241 NM_016353 ENSG00000104219 ZDHHC2 DHHC2|ZNF372 zinc finger DHHC-type containing 2 protein-coding 191.538-5 chr9 11619944 11620473 + 0.846154 NA Intergenic Intergenic 1007002 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA 173.846-4 chr2 116747661 116747950 + 0.846154 NA Intergenic L1M5|LINE|L1 -1066886 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 169.615-12 chr8 118937887 118938165 + 0.846154 NA intron (NM_002546, intron 1 of 4) Tigger13a|DNA|TcMar-Tigger 13859 NM_002546 4982 Hs.81791 NM_002546 ENSG00000164761 TNFRSF11B OCIF|OPG|PDB5|TR1 TNF receptor superfamily member 11b protein-coding 206.615-2 chr12 54530546 54530877 + 0.846154 NA intron (NM_001184976, intron 22 of 30) intron (NM_001184976, intron 22 of 30) -18682 NM_001288768 5153 Hs.530871 NM_000924 ENSG00000123360 PDE1B HEL-S-79p|PDE1B1|PDES1B phosphodiesterase 1B protein-coding 178.846-2 chr17 50047196 50047513 + 0.846154 NA Intergenic MamTip2|DNA|hAT-Tip100 8385 NR_038230 284080 Hs.274864 NR_038230 ENSG00000246640 PICART1 - p53 inducible cancer associated RNA transcript 1 ncRNA 177.769-5 chr3 88500011 88500391 + 0.846154 NA Intergenic Intergenic 161745 NM_001368168 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding 200.308 chr5 44993655 44994140 + 0.846154 NA Intergenic Intergenic 184950 NM_016640 10884 Hs.124165 NM_016640 ENSG00000112996 MRPS30 MRP-S30|PAP|PDCD9|S30mt mitochondrial ribosomal protein S30 protein-coding 200.846-3 chr3 126122084 126122424 + 0.846154 NA intron (NR_072979, intron 15 of 20) L1M4b|LINE|L1 18614 NR_046602 100874204 Hs.742339 NR_046602 ENSG00000250218 ALDH1L1-AS1 - ALDH1L1 antisense RNA 1 ncRNA 157.846-20 chr8 136542705 136542975 + 0.846154 NA intron (NR_147196, intron 2 of 5) intron (NR_147196, intron 2 of 5) 12042 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 192.539-2 chr3 83933929 83934250 + 0.846154 NA Intergenic MER61-int|LTR|ERV1 935486 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 201.154 chr14 42593884 42594310 + 0.846154 NA Intergenic Intergenic 987241 NR_144389 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 170.846-7 chr5 169006964 169007206 + 0.846154 NA intron (NM_003062, intron 4 of 35) THE1D|LTR|ERVL-MaLR -6142 NR_109897 728095 Hs.145601 NR_109897 LOC728095 - uncharacterized LOC728095 ncRNA 207.462-2 chr2 81453636 81453914 + 0.846154 NA Intergenic Intergenic 13171 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 186.385-6 chr8 118461739 118462083 + 0.846154 NA intron (NM_001101676, intron 2 of 4) L1ME3G|LINE|L1 -159090 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 161.385-4 chr7 6476185 6476502 + 0.846154 NA intron (NM_001100603, intron 1 of 3) intron (NM_001100603, intron 1 of 3) 7809 NM_006854 11014 Hs.654552 NM_006854 ENSG00000136240 KDELR2 ELP-1|ERD2.2 KDEL endoplasmic reticulum protein retention receptor 2 protein-coding 187-2 chr5 54484033 54484271 + 0.846154 NA Intergenic MER34|LTR|ERV1 28453 NM_006308 8988 Hs.41707 NM_006308 ENSG00000169271 HSPB3 DHMN2C|HMN2C|HSPL27 heat shock protein family B (small) member 3 protein-coding 193.692 chr14 39218354 39218691 + 0.846154 NA Intergenic L4_A_Mam|LINE|RTE-X -15393 NM_054024 4253 Hs.287694 NM_005930 ENSG00000150527 MIA2 CTAGE5|MEA6|MGEA|MGEA11|MGEA6|TALI MIA SH3 domain ER export factor 2 protein-coding 157.923-2 chr5 132717542 132717932 + 0.846154 NA intron (NM_007054, intron 5 of 16) intron (NM_007054, intron 5 of 16) 19809 NM_007054 11127 Hs.43670 NM_007054 ENSG00000131437 KIF3A FLA10|KLP-20 kinesin family member 3A protein-coding 174.692-2 chr2 67200466 67200894 + 0.846154 NA intron (NR_038844, intron 3 of 7) intron (NR_038844, intron 3 of 7) -12728 NR_110568 101927661 Hs.580508 NR_110568 ENSG00000235885 LOC101927661 - uncharacterized LOC101927661 ncRNA 212.077-2 chr2 193292995 193293440 + 0.846154 NA Intergenic L1ME2z|LINE|L1 543372 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA 177.231-5 chr3 84568849 84569130 + 0.846154 NA Intergenic Intergenic 300586 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 169.538-10 chr7 88689190 88689627 + 0.846154 NA Intergenic Intergenic -70292 NM_181646 219578 Hs.684410 NM_181646 ENSG00000182348 ZNF804B - zinc finger protein 804B protein-coding 225.692-11 chr7 52299659 52299977 + 0.846154 NA Intergenic L1MD2|LINE|L1 -735815 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 182.077-3 chr2 36840678 36841110 + 0.846154 NA 3' UTR (NM_003162, exon 18 of 18) 3' UTR (NM_003162, exon 18 of 18) 125642 NM_003162 6801 Hs.127486 NM_003162 ENSG00000115808 STRN PPP2R6A|SG2NA|STRN1 striatin protein-coding 206.462-5 chrX 99782379 99782773 + 0.846154 NA Intergenic Intergenic 627697 NM_001105243 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding 363.692 chr4 49709661 49711033 + 0.846154 NA Intergenic SAR|Satellite|Satellite 723705 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 195.846-2 chr2 184952527 184953025 + 0.846154 NA Intergenic Intergenic 214296 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA 175.077-2 chr14 62632210 62632629 + 0.846154 NA Intergenic L2|LINE|L2 413039 NM_139318 27133 Hs.27043 NM_139318 ENSG00000140015 KCNH5 EAG2|H-EAG2|Kv10.2|hEAG2 potassium voltage-gated channel subfamily H member 5 protein-coding 173.154-2 chr11 85995427 85995822 + 0.846154 NA intron (NM_007166, intron 12 of 19) intron (NM_007166, intron 12 of 19) 73460 NM_001008660 8301 Hs.163893 NM_007166 ENSG00000073921 PICALM CALM|CLTH|LAP phosphatidylinositol binding clathrin assembly protein protein-coding 183.231-6 chr2 14797939 14798220 + 0.846154 NA Intergenic L1ME1|LINE|L1 165362 NM_001369364 151354 Hs.260855 NM_145175 ENSG00000162981 LRATD1 FAM84A|NSE1|PP11517 LRAT domain containing 1 protein-coding 182.769-12 chrX 47384486 47384867 + 0.846154 NA intron (NM_003446, intron 1 of 3) MER4B-int|LTR|ERV1 -3974 NR_003710 100124540 Hs.693443 NR_003710 ENSG00000221459 SNORA11C - small nucleolar RNA, H/ACA box 11C snoRNA 249.308 chr1 189573874 189574284 + 0.846154 NA Intergenic Intergenic 901931 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 164.615 chr1 210968919 210969276 + 0.846154 NA intron (NM_002238, intron 6 of 10) L1M5|LINE|L1 164277 NR_046784 100874296 Hs.737764 NR_046784 KCNH1-IT1 - KCNH1 intronic transcript 1 ncRNA 153.231-4 chr12 54465695 54466027 + 0.846154 NA intron (NM_144594, intron 2 of 8) intron (NM_144594, intron 2 of 8) 7741 NM_144594 121355 Hs.524476 NM_144594 ENSG00000170627 GTSF1 Cue110|FAM112B gametocyte specific factor 1 protein-coding 169.923-2 chr16 61921142 61921600 + 0.846154 NA intron (NM_001796, intron 2 of 11) Charlie1a|DNA|hAT-Charlie 115067 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 151.769-9 chr5 42380361 42380695 + 0.846154 NA Intergenic L1MD|LINE|L1 -42911 NM_000163 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 185.923-2 chr14 34876206 34876463 + 0.846154 NA promoter-TSS (NM_182648) promoter-TSS (NM_182648) -974 NM_182648 11177 Hs.509140 NM_013448 ENSG00000198604 BAZ1A ACF1|WALp1|WCRF180|hACF1 bromodomain adjacent to zinc finger domain 1A protein-coding 236.385-3 chr2 185156593 185157046 + 0.846154 NA Intergenic Intergenic 10253 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA 196.462-2 chr14 63724337 63724779 + 0.846154 NA intron (NM_030791, intron 1 of 2).2 intron (NM_030791, intron 1 of 2).2 3507 NM_030791 81537 Hs.24678 NM_030791 ENSG00000126821 SGPP1 SPP-1|SPPase1 sphingosine-1-phosphate phosphatase 1 protein-coding 169.462 chr1 197000967 197001235 + 0.846154 NA intron (NM_030787, intron 7 of 9) intron (NM_030787, intron 7 of 9) 23564 NM_030787 81494 Hs.282594 NM_030787 ENSG00000134389 CFHR5 CFHL5|CFHR5D|FHR-5|FHR5 complement factor H related 5 protein-coding 158.692-7 chr6 140017293 140017577 + 0.846154 NA intron (NR_121623, intron 1 of 1) L3|LINE|CR1 -26174 NR_121624 103352541 Hs.582647 NR_121624 LOC103352541 - uncharacterized LOC103352541 ncRNA 218-2 chr3 190520513 190520916 + 0.846154 NA intron (NM_001364879, intron 1 of 10) intron (NM_001364879, intron 1 of 10) 6629 NM_001167931 3556 Hs.478673 NM_002182 ENSG00000196083 IL1RAP C3orf13|IL-1RAcP|IL1R3 interleukin 1 receptor accessory protein protein-coding 196.538-2 chr8 113976791 113977172 + 0.846154 NA Intergenic Intergenic -540042 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 187.769 chr3 124362743 124363196 + 0.846154 NA intron (NM_001024660, intron 10 of 59) intron (NM_001024660, intron 10 of 59) -11363 NR_106731 102464832 NR_106731 ENSG00000276656 MIR6083 hsa-mir-6083 microRNA 6083 ncRNA 158.615-7 chr4 19800491 19800853 + 0.846154 NA Intergenic Intergenic -451233 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding 250.769-2 chr5 19374795 19375245 + 0.846154 NA Intergenic Intergenic 511252 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 162.461-4 chr2 169934883 169935263 + 0.846154 NA intron (NM_172070, intron 19 of 38) A-rich|Low_complexity|Low_complexity 107565 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding 153.462-6 chr8 59427918 59428174 + 0.846154 NA Intergenic Intergenic 308836 NR_149030 100505501 NR_149030 LOC100505501 - uncharacterized LOC100505501 ncRNA 190.385-2 chr4 79711442 79711851 + 0.846154 NA Intergenic Charlie7|DNA|hAT-Charlie -115825 NR_026555 118425 Hs.104215 NR_026555 ENSG00000251321 PCAT4 GDEP|PCA4|PCAN1 prostate cancer associated transcript 4 ncRNA 163.308-5 chr5 92587650 92587984 + 0.846154 NA Intergenic L4_A_Mam|LINE|RTE-X 983526 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 179.692-2 chr1 188233412 188233649 + 0.846154 NA Intergenic Intergenic 789902 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 195.769-2 chr15 53641912 53642427 + 0.846154 NA intron (NM_182758, intron 14 of 19) intron (NM_182758, intron 14 of 19) -101066 NM_001277176 256764 Hs.122125 NM_182758 ENSG00000166415 WDR72 AI2A3 WD repeat domain 72 protein-coding 164.539 chr3 33578185 33578422 + 0.846154 NA intron (NM_001365629, intron 23 of 39) intron (NM_001365629, intron 23 of 39) 81376 NM_001207044 23122 Hs.108614 NM_015097 ENSG00000163539 CLASP2 - cytoplasmic linker associated protein 2 protein-coding 189.077 chr10 93462782 93463372 + 0.846154 NA intron (NM_013451, intron 1 of 53) intron (NM_013451, intron 1 of 53) 19257 NM_133337 26509 Hs.602086 NM_013451 ENSG00000138119 MYOF FER1L3 myoferlin protein-coding 221.385 chr20 59203664 59203987 + 0.846154 NA intron (NM_178457, intron 2 of 4) intron (NM_178457, intron 2 of 4) 12805 NM_178457 128611 Hs.473204 NM_178457 ENSG00000124203 ZNF831 C20orf174 zinc finger protein 831 protein-coding 176.077-3 chr15 88576592 88576935 + 0.846154 NA Intergenic MLT1A0|LTR|ERVL-MaLR 27840 NR_120369 101929743 Hs.558810 NR_120369 ENSG00000249487 LINC01586 - long intergenic non-protein coding RNA 1586 ncRNA 183.923-2 chr15 59409382 59409744 + 0.846154 NA Intergenic Intergenic -28623 NM_152450 145773 Hs.531168 NM_152450 ENSG00000157470 FAM81A - family with sequence similarity 81 member A protein-coding 151.615-4 chr13 73998013 73998473 + 0.846154 NA intron (NM_007249, intron 1 of 7) intron (NM_007249, intron 1 of 7) 135686 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding 211.077-3 chr1 232023384 232023692 + 0.846154 NA intron (NM_001164537, intron 12 of 13) L1ME4c|LINE|L1 97704 NR_126441 104472714 NR_126441 ENSG00000226758 DISC1-IT1 - DISC1 intronic transcript 1 ncRNA 201.769-2 chr2 196666470 196666865 + 0.846154 NA intron (NM_001080539, intron 6 of 27) intron (NM_001080539, intron 6 of 27) 26952 NM_001080539 284992 Hs.132519 NM_173466 ENSG00000144395 CCDC150 - coiled-coil domain containing 150 protein-coding 177.538-2 chr4 15859629 15859905 + 0.846154 NA Intergenic L1MA4A|LINE|L1 78973 NM_005130 9982 Hs.1690 NM_005130 ENSG00000137440 FGFBP1 FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17 fibroblast growth factor binding protein 1 protein-coding 203.462-2 chr7 36677547 36677797 + 0.846154 NA intron (NM_001177507, intron 1 of 19) L1MB7|LINE|L1 46822 NM_001637 313 Hs.488007 NM_001637 ENSG00000136250 AOAH - acyloxyacyl hydrolase protein-coding 181.923-3 chr3 119799446 119799763 + 0.846154 NA intron (NM_022002, intron 1 of 8) A-rich|Low_complexity|Low_complexity 16894 NM_022002 8856 Hs.7303 NM_003889 ENSG00000144852 NR1I2 BXR|ONR1|PAR|PAR1|PAR2|PARq|PRR|PXR|SAR|SXR nuclear receptor subfamily 1 group I member 2 protein-coding 206.462-3 chr4 35622692 35623579 + 0.846154 NA Intergenic Intergenic 620804 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 211.538-3 chr8 16086884 16087510 + 0.846154 NA Intergenic BLACKJACK|DNA|hAT-Blackjack 99075 NM_001363744 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding 204.154 chr17 39021120 39021483 + 0.846154 NA Intergenic LTR27C|LTR|ERV1 5809 NR_135645 105371766 Hs.311469 NR_135645 ENSG00000266013 LINC02079 - long intergenic non-protein coding RNA 2079 ncRNA 171.538-3 chr2 80590272 80590738 + 0.846154 NA intron (NM_001282599, intron 9 of 11) intron (NM_001282599, intron 9 of 11) 277126 NM_001282599 1496 Hs.167368 NM_004389 ENSG00000066032 CTNNA2 CAP-R|CAPR|CDCBM9|CT114|CTNR catenin alpha 2 protein-coding 247.308-2 chr4 53696437 53697096 + 0.846154 NA intron (NR_125918, intron 1 of 2) L1MB1|LINE|L1 865 NR_125918 100506444 Hs.636176 NR_125918 ENSG00000249341 LOC100506444 - uncharacterized LOC100506444 ncRNA 165.846-3 chr12 129524212 129524695 + 0.846154 NA intron (NM_133448, intron 3 of 8) L1ME3Cz|LINE|L1 315852 NR_110058 101927735 Hs.569212 NR_110058 ENSG00000256699 TMEM132D-AS2 - TMEM132D antisense RNA 2 ncRNA 202.538-4 chr5 89112570 89113026 + 0.846154 NA intron (NR_136221, intron 4 of 6) intron (NR_136221, intron 4 of 6) -208693 NM_001131005 4208 Hs.649965 NM_002397 ENSG00000081189 MEF2C C5DELq14.3|DEL5q14.3 myocyte enhancer factor 2C protein-coding 180.923-2 chr14 73262976 73263326 + 0.846154 NA intron (NM_001365907, intron 18 of 25) MIRc|SINE|MIR -17150 NR_135248 101928123 Hs.660593 NR_135248 LOC101928123 - uncharacterized LOC101928123 ncRNA 184.692-2 chr4 31806017 31806432 + 0.846154 NA Intergenic Intergenic -191155 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 167.154-3 chr3 149480867 149481211 + 0.846154 NA intron (NM_004617, intron 2 of 4) AluSx3|SINE|Alu 6342 NM_004617 7104 Hs.133527 NM_004617 ENSG00000169903 TM4SF4 ILTMP|il-TMP transmembrane 4 L six family member 4 protein-coding 156.692-7 chr4 47988762 47989086 + 0.846154 NA intron (NM_000087, intron 2 of 10) MER8|DNA|TcMar-Tigger -7391 NM_001142564 1259 Hs.1323 NM_000087 ENSG00000198515 CNGA1 CNCG|CNCG1|CNG-1|CNG1|RCNC1|RCNCa|RCNCalpha|RP49 cyclic nucleotide gated channel alpha 1 protein-coding 186.308-2 chr13 106522880 106523144 + 0.846154 NA intron (NM_004093, intron 1 of 4) intron (NM_004093, intron 1 of 4) 12028 NM_004093 1948 Hs.149239 NM_004093 ENSG00000125266 EFNB2 EPLG5|HTKL|Htk-L|LERK5 ephrin B2 protein-coding 241.154-2 chr3 165686172 165686708 + 0.846154 NA Intergenic HAL1|LINE|L1 150983 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding 181.077 chr11 22991818 22992215 + 0.846154 NA Intergenic LTR16|LTR|ERVL -131542 NM_001195637 100500938 Hs.555029 NM_001195637 ENSG00000255359 CCDC179 - coiled-coil domain containing 179 protein-coding 259.539 chr1 94271023 94271602 + 0.846154 NA Intergenic MLT1F2|LTR|ERVL-MaLR -23566 NM_001328665 9411 Hs.483238 NM_004815 ENSG00000137962 ARHGAP29 PARG1 Rho GTPase activating protein 29 protein-coding 191.769 chr11 30763021 30763462 + 0.846154 NA Intergenic MLT1G|LTR|ERVL-MaLR -176888 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding 155.846-8 chr3 104016800 104017043 + 0.846154 NA Intergenic Intergenic -492805 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 167 chr11 121395831 121396059 + 0.846154 NA Intergenic Intergenic -56369 NM_003105 6653 Hs.368592 NM_003105 ENSG00000137642 SORL1 C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250 sortilin related receptor 1 protein-coding 160.308-7 chr5 65122995 65123251 + 0.846154 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 354193 NM_001364478 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding 153.077-9 chr9 94272605 94272916 + 0.846154 NA intron (NM_194320, intron 1 of 4) L1MB1|LINE|L1 -13449 NR_160773 158257 Hs.652626 NR_046163 ENSG00000230262 LINC02603 MIRLET7DHG long intergenic non-protein coding RNA 2603 ncRNA 155.462-3 chr2 182832494 182832829 + 0.846154 NA TTS (NM_001463) TTS (NM_001463) 33976 NM_001463 2487 Hs.128453 NM_001463 ENSG00000162998 FRZB FRE|FRITZ|FRP-3|FRZB-1|FRZB-PEN|FRZB1|FZRB|OS1|SFRP3|SRFP3|hFIZ frizzled related protein protein-coding 282.154 chr3 180349202 180349616 + 0.846154 NA Intergenic Intergenic -64764 NR_132416 100505609 Hs.518427 NR_132416 ENSG00000241696 LINC02053 - long intergenic non-protein coding RNA 2053 ncRNA 197.692-3 chr8 130268549 130268849 + 0.846154 NA intron (NM_001362925, intron 3 of 29) intron (NM_001362925, intron 3 of 29) 27834 NR_002765 29065 Hs.639318 NR_002765 ASAP1-IT1 ASAP1-IT|ASAP1IT|ASAP1IT1|DDEF1IT1|HSPC054|NCRNA00050 ASAP1 intronic transcript 1 ncRNA 156.692-2 chr10 22753549 22753795 + 0.846154 NA Intergenic Intergenic -39094 NM_005028 5305 Hs.57079 NM_005028 ENSG00000150867 PIP4K2A PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK phosphatidylinositol-5-phosphate 4-kinase type 2 alpha protein-coding 193.462-4 chr8 126209374 126209812 + 0.846154 NA Intergenic L1PA15|LINE|L1 -115902 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 183.615-11 chr9 8823397 8823733 + 0.846154 NA intron (NM_002839, intron 11 of 45) AluJb|SINE|Alu -34453 NR_121600 101929407 Hs.649971 NR_121599 PTPRD-AS1 - PTPRD antisense RNA 1 ncRNA 178.538-3 chr5 19147961 19148197 + 0.846154 NA Intergenic L1M5|LINE|L1 738193 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 210.769-2 chr8 29327021 29327487 + 0.846154 NA Intergenic SATR2|Satellite|Satellite 21551 NM_057158 1846 Hs.417962 NM_001394 ENSG00000120875 DUSP4 HVH2|MKP-2|MKP2|TYP dual specificity phosphatase 4 protein-coding 181.077-3 chr7 7530665 7531162 + 0.846154 NA intron (NM_001037763, intron 3 of 34) intron (NM_001037763, intron 3 of 34) 4960 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 179.846-4 chr4 86944869 86945183 + 0.846154 NA intron (NM_001166693, intron 1 of 20) intron (NM_001166693, intron 1 of 20) 10024 NM_001166693 4299 Hs.480190 NM_005935 ENSG00000172493 AFF1 AF4|MLLT2|PBM1 AF4/FMR2 family member 1 protein-coding 193.615-4 chr5 14075411 14075829 + 0.846154 NA Intergenic MLT1J2|LTR|ERVL-MaLR -67722 NR_134469 7204 Hs.130031 NM_007118 ENSG00000038382 TRIO ARHGEF23|MEBAS|MRD44|tgat trio Rho guanine nucleotide exchange factor protein-coding 213.231-5 chr7 77560238 77560603 + 0.846154 NA intron (NM_001131009, intron 1 of 16) L1MB2|LINE|L1 22377 NM_001131008 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding 164.385 chr12 18110830 18111072 + 0.846154 NA Intergenic Intergenic -20758 NM_001286201 79785 Hs.732831 NM_024730 ENSG00000111404 RERGL - RERG like protein-coding 193.538-5 chr18 6606015 6606440 + 0.846154 NA Intergenic Intergenic 94811 NR_120518 100130480 Hs.646267 NM_001243517 ENSG00000265944 LINC01387 C18orf64 long intergenic non-protein coding RNA 1387 ncRNA 162.692-7 chr6 135469066 135469445 + 0.846154 NA intron (NM_017651, intron 4 of 27) L1PA10|LINE|L1 28485 NM_001134831 54806 Hs.386684 NM_017651 ENSG00000135541 AHI1 AHI-1|JBTS3|ORF1|dJ71N10.1 Abelson helper integration site 1 protein-coding 156.077-3 chr7 105059261 105059571 + 0.846154 NA intron (NM_182931, intron 3 of 26) intron (NM_182931, intron 3 of 26) 45211 NM_182931 55904 Hs.592262 NM_018682 ENSG00000005483 KMT2E HDCMC04P|MLL5|NKp44L lysine methyltransferase 2E protein-coding 170.539-2 chr3 100034995 100035265 + 0.846154 NA intron (NM_001042459, intron 1 of 4) intron (NM_001042459, intron 1 of 4) -70732 NR_037486 100500859 NR_037486 ENSG00000264897 MIR3921 - microRNA 3921 ncRNA 269.769 chr17 53184810 53185274 + 0.846154 NA Intergenic L1PB1|LINE|L1 199537 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding 165.308-2 chr10 14856658 14856920 + 0.846154 NA intron (NM_016299, intron 10 of 13) AluJb|SINE|Alu 18483 NM_016299 51182 Hs.534169 NM_016299 ENSG00000187522 HSPA14 HSP70-4|HSP70L1 heat shock protein family A (Hsp70) member 14 protein-coding 208.538-2 chr7 38644944 38645311 + 0.846154 NA Intergenic L1MEg|LINE|L1 -13560 NM_139316 273 Hs.592182 NM_001635 ENSG00000078053 AMPH AMPH1 amphiphysin protein-coding 206.615-5 chr20 17008939 17009389 + 0.846154 NA Intergenic MLT1B|LTR|ERVL-MaLR -216943 NM_001201528 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding 157-10 chrX 74207489 74207704 + 0.846154 NA intron (NR_028379, intron 5 of 6) intron (NR_028379, intron 5 of 6) 10865 NR_030398 693122 NR_030398 ENSG00000202566 MIR421 MIRN421|hsa-mir-421 microRNA 421 ncRNA 180.231-5 chr5 22414483 22414716 + 0.846154 NA intron (NM_004061, intron 2 of 14) intron (NM_004061, intron 2 of 14) -200749 NM_001364107 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 192.461-2 chr3 65655073 65655587 + 0.846154 NA intron (NM_001365904, intron 1 of 24) intron (NM_001365904, intron 1 of 24) -238486 NR_046575 100873983 Hs.663889 NR_046575 ENSG00000240175 MAGI1-AS1 - MAGI1 antisense RNA 1 ncRNA 194.539-2 chrX 28971444 28971744 + 0.846154 NA intron (NM_014271, intron 2 of 10) intron (NM_014271, intron 2 of 10) 384148 NM_014271 11141 Hs.658912 NM_014271 ENSG00000169306 IL1RAPL1 IL-1-RAPL-1|IL-1RAPL-1|IL1R8|IL1RAPL|IL1RAPL-1|MRX10|MRX21|MRX34|OPHN4|TIGIRR-2 interleukin 1 receptor accessory protein like 1 protein-coding 180.615-3 chr6 72301374 72301643 + 0.846154 NA intron (NM_001350414, intron 17 of 24) MER2|DNA|TcMar-Tigger -65238 NM_001168411 22999 Hs.485729 NM_014989 ENSG00000079841 RIMS1 CORD7|RAB3IP2|RIM|RIM1 regulating synaptic membrane exocytosis 1 protein-coding 182.692 chr7 64713379 64713665 + 0.846154 NA Intergenic Intergenic 34458 NR_106898 102465505 NR_106898 ENSG00000275667 MIR6839 hsa-mir-6839 microRNA 6839 ncRNA 235.077-2 chr10 88548361 88548975 + 0.846154 NA intron (NM_018363, intron 4 of 6) (AT)n|Simple_repeat|Simple_repeat 34650 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding 190.769-6 chr9 84002267 84002790 + 0.846154 NA exon (NM_001358294, exon 3 of 3) exon (NM_001358294, exon 3 of 3) 21723 NM_024945 80010 Hs.726327 NM_024945 ENSG00000178966 RMI1 BLAP75|C9orf76|FAAP75 RecQ mediated genome instability 1 protein-coding 173.154-3 chr12 16960459 16960837 + 0.846154 NA Intergenic Intergenic -28099 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo 176.308-9 chr8 86685406 86685803 + 0.846154 NA intron (NM_019098, intron 3 of 17) intron (NM_019098, intron 3 of 17) 58071 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding 226.846-3 chr4 35323739 35324284 + 0.846154 NA Intergenic Intergenic 919928 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 195.692-6 chr7 23369405 23369708 + 0.846154 NA intron (NM_006547, intron 3 of 14) LTR45B|LTR|ERV1 -26890 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA 163.692-4 chr2 68249291 68249565 + 0.846154 NA intron (NM_000945, intron 1 of 5) intron (NM_000945, intron 1 of 5) 3104 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding 170.692-4 chr20 46221914 46222237 + 0.846154 NA intron (NM_021248, intron 4 of 11) MIRb|SINE|MIR 86423 NM_021248 64405 Hs.472861 NM_021248 ENSG00000149654 CDH22 C20orf25|dJ998H6.1 cadherin 22 protein-coding 195.231-6 chr20 1345469 1345909 + 0.846154 NA intron (NR_040047, intron 1 of 2) L1MC2|LINE|L1 -16550 NM_080489 27111 Hs.657015 NM_015685 ENSG00000125775 SDCBP2 SITAC|SITAC18|ST-2|ST2 syndecan binding protein 2 protein-coding 210.769 chr7 40984563 40985075 + 0.846154 NA Intergenic Intergenic -4880 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 199 chr1 172664109 172664592 + 0.846154 NA exon (NM_000639, exon 3 of 4) exon (NM_000639, exon 3 of 4) 5247 NM_000639 356 Hs.2007 NM_000639 ENSG00000117560 FASLG ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A Fas ligand protein-coding 210-3 chr4 66045807 66046187 + 0.846154 NA Intergenic MLT1D|LTR|ERVL-MaLR -230827 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 162.846-7 chr22 48317843 48318239 + 0.846154 NA Intergenic Intergenic 43677 NR_036172 100422916 NR_036172 ENSG00000266508 MIR3201 - microRNA 3201 ncRNA 205.923-3 chr2 57661350 57661646 + 0.846154 NA Intergenic Intergenic -246153 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 225.615 chr13 88721605 88722075 + 0.846154 NA Intergenic Intergenic 94987 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA 206.077-4 chr15 60438422 60438699 + 0.846154 NA intron (NM_024611, intron 12 of 15) intron (NM_024611, intron 12 of 15) -40574 NM_001002857 302 Hs.511605 NM_004039 ENSG00000182718 ANXA2 ANX2|ANX2L4|CAL1H|HEL-S-270|LIP2|LPC2|LPC2D|P36|PAP-IV annexin A2 protein-coding 271.077-2 chr2 82467821 82468161 + 0.846154 NA Intergenic Intergenic -388812 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo 171.231-2 chr2 101921391 101921728 + 0.846154 NA Intergenic Intergenic -61906 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA 195.154 chr10 63505477 63505957 + 0.846154 NA intron (NM_001322258, intron 1 of 24) intron (NM_001322258, intron 1 of 24) -15684 NM_001001330 221035 Hs.499833 NM_001001330 ENSG00000165476 REEP3 C10orf74|Yip2b receptor accessory protein 3 protein-coding 175.154-2 chr10 36858347 36858620 + 0.846154 NA Intergenic Intergenic -267374 NM_052997 91074 Hs.373787 NM_052997 ENSG00000148513 ANKRD30A NY-BR-1 ankyrin repeat domain 30A protein-coding 167.077-10 chr7 97233526 97233928 + 0.846154 NA Intergenic AluJb|SINE|Alu 117134 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding 176-3 chr17 60048673 60048973 + 0.846154 NA intron (NM_022070, intron 16 of 19) intron (NM_022070, intron 16 of 19) -5718 NR_039890 100616210 NR_039890 ENSG00000264049 MIR4737 - microRNA 4737 ncRNA 171.077 chr11 35031379 35031771 + 0.846154 NA Intergenic MIR3|SINE|MIR 89738 NR_039836 100616437 NR_039836 ENSG00000251862 MIR1343 - microRNA 1343 ncRNA 180 chr11 86342771 86343148 + 0.846154 NA intron (NM_001322404, intron 3 of 4) L1ME3G|LINE|L1 -31777 NM_021827 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding 156-7 chr16 8285771 8285999 + 0.846154 NA Intergenic (CCTT)n|Simple_repeat|Simple_repeat 303953 NM_001146336 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 170.846-2 chr14 65654290 65654670 + 0.846154 NA intron (NM_004480, intron 5 of 9) AluSx|SINE|Alu 183378 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA 172-4 chr5 50768446 50768729 + 0.846154 NA intron (NM_024615, intron 7 of 25) intron (NM_024615, intron 7 of 25) 101173 NM_001331028 79668 Hs.369581 NM_024615 ENSG00000151883 PARP8 ARTD16|pART16 poly(ADP-ribose) polymerase family member 8 protein-coding 155.385-16 chr9 88614025 88614331 + 0.846154 NA Intergenic L1PA15|LINE|L1 79000 NM_145283 158046 Hs.734507 NM_145283 ENSG00000130045 NXNL2 C9orf121|RDCVF2|RdCVF2L nucleoredoxin like 2 protein-coding 172.692-2 chr14 57275692 57275927 + 0.846154 NA intron (NM_018229, intron 2 of 7) intron (NM_018229, intron 2 of 7) 6838 NR_026895 55745 Hs.597349 NM_018229 ENSG00000053770 AP5M1 C14orf108|MUDENG|Mu5|MuD adaptor related protein complex 5 subunit mu 1 protein-coding 169.846-5 chr5 127461728 127462108 + 0.846154 NA TTS (NM_032446) TTS (NM_032446) -55722 NM_130809 133619 Hs.483259 NM_130809 ENSG00000164244 PRRC1 - proline rich coiled-coil 1 protein-coding 167.769-6 chr5 23748325 23748672 + 0.846154 NA Intergenic Intergenic -202850 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA 178.769-9 chrX 18051260 18051600 + 0.846154 NA intron (NR_133641, intron 1 of 4) intron (NR_133641, intron 1 of 4) 53214 NR_133641 105373144 NR_133641 ENSG00000225882 LINC01456 - long intergenic non-protein coding RNA 1456 ncRNA 171.308 chr12 13352414 13352829 + 0.846154 NA Intergenic L1MEi|LINE|L1 24124 NR_036555 283422 Hs.448717 NM_182558 ENSG00000180861 LINC01559 C12orf36 long intergenic non-protein coding RNA 1559 ncRNA 226.692 chr1 195734501 195734794 + 0.846154 NA Intergenic MER50-int|LTR|ERV1 354068 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA 224.923-3 chr6 131717478 131717831 + 0.846154 NA intron (NR_133007, intron 15 of 23) intron (NR_133007, intron 15 of 23) -6637 NM_001145659 643854 Hs.632613 NM_001145659 ENSG00000236761 CTAGE9 - CTAGE family member 9 protein-coding 166.615-10 chr6 46631229 46631460 + 0.846154 NA intron (NM_016593, intron 5 of 11) MIR|SINE|MIR 21474 NM_016593 51302 Hs.387367 NM_016593 ENSG00000146233 CYP39A1 - cytochrome P450 family 39 subfamily A member 1 protein-coding 182.154-3 chr14 52620061 52620292 + 0.846154 NA intron (NR_148417, intron 4 of 7) L1ME2z|LINE|L1 67340 NM_001353361 283554 Hs.416214 NM_001099652 ENSG00000180998 GPR137C TM7SF1L2 G protein-coupled receptor 137C protein-coding 187-3 chr6 125162590 125163014 + 0.846154 NA intron (NM_001292026, intron 1 of 4) MIR|SINE|MIR 8556 NM_001003395 7164 Hs.591347 NM_003287 ENSG00000111907 TPD52L1 D53 TPD52 like 1 protein-coding 225.077-2 chr8 58571769 58572391 + 0.846154 NA intron (NM_001348339, intron 3 of 7) intron (NM_001348339, intron 3 of 7) 18819 NM_005625 6386 Hs.200804 NM_005625 ENSG00000137575 SDCBP MDA-9|MDA9|ST1|SYCL|TACIP18 syndecan binding protein protein-coding 295 chr8 132787774 132788333 + 0.846154 NA intron (NM_198513, intron 2 of 7) intron (NM_198513, intron 2 of 7) 12665 NM_016018 51105 Hs.304362 NM_016018 ENSG00000129292 PHF20L1 CGI-72|TDRD20B|URLC1 PHD finger protein 20 like 1 protein-coding 217.923-2 chr8 17893631 17893927 + 0.846154 NA intron (NM_201552, intron 1 of 8) intron (NM_201552, intron 1 of 8) 1625 NM_147203 2267 Hs.491143 NM_004467 ENSG00000104760 FGL1 HFREP1|HP-041|HPS|LFIRE-1|LFIRE1 fibrinogen like 1 protein-coding 242.615 chr21 29729376 29729999 + 0.846154 NA intron (NM_000830, intron 1 of 16) intron (NM_000830, intron 1 of 16) -18488 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA 206.462 chr14 47518194 47518550 + 0.846154 NA intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) 156582 NM_001113498 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 166.692 chr10 52203469 52203719 + 0.846154 NA intron (NM_001098512, intron 9 of 17) L1PA15|LINE|L1 110534 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA 182.308 chr1 147741603 147741902 + 0.846154 NA Intergenic MLT1J2-int|LTR|ERVL-MaLR 18850 NM_181703 2702 Hs.447968 NM_005266 ENSG00000265107 GJA5 ATFB11|CX40 gap junction protein alpha 5 protein-coding 167.077-7 chr4 61062507 61062784 + 0.846154 NA Intergenic Intergenic -81011 NR_147148 105377249 Hs.575120 NR_147148 ENSG00000240152 LINC02271 - long intergenic non-protein coding RNA 2271 ncRNA 191.692-2 chr2 157195189 157195598 + 0.846154 NA Intergenic Intergenic -62312 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding 298.846 chr20 14773457 14774067 + 0.846154 NA intron (NM_001351663, intron 5 of 17) MLT1B|LTR|ERVL-MaLR 155756 NR_037841 100379174 Hs.407533 NR_037841 ENSG00000235914 MACROD2-AS1 BA318C17.1|NCRNA00186 MACROD2 antisense RNA 1 ncRNA 176.923-3 chr17 66063886 66064264 + 0.846154 NA intron (NM_001353129, intron 10 of 26) L2c|LINE|L2 127817 NM_001302891 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 194.154-9 chr8 36462518 36462831 + 0.846154 NA Intergenic L1M4b|LINE|L1 -321700 NM_001031836 157855 Hs.13861 NM_001031836 ENSG00000215262 KCNU1 KCNMC1|KCa5|KCa5.1|Kcnma3|Slo3 potassium calcium-activated channel subfamily U member 1 protein-coding 170.615-4 chr6 141689956 141690207 + 0.846154 NA Intergenic Tigger7|DNA|TcMar-Tigger 398718 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding 233.462-2 chr2 224248817 224249162 + 0.846154 NA Intergenic Intergenic 153005 NM_024785 79843 Hs.147585 NM_024785 ENSG00000124019 FAM124B - family with sequence similarity 124 member B protein-coding 166.923-3 chr2 114085882 114086126 + 0.846154 NA Intergenic Intergenic -106020 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA 196.539-2 chr7 48416766 48417019 + 0.846154 NA intron (NM_152701, intron 41 of 61) intron (NM_152701, intron 41 of 61) 245434 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding 163.846-12 chr6 22485868 22486113 + 0.846154 NA Intergenic L1MC1|LINE|L1 -83576 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding 208.077 chr8 88727813 88728179 + 0.846154 NA Intergenic L2a|LINE|L2 -400513 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 165.461 chr1 229758621 229759129 + 0.846154 NA Intergenic Intergenic 126943 NR_146476 101927504 NR_146473 ENSG00000227043 LINC01682 - long intergenic non-protein coding RNA 1682 ncRNA 222.846-2 chr9 29230829 29231131 + 0.846154 NA Intergenic L2a|LINE|L2 -17379 NM_001258282 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 169.231-4 chr2 199261413 199261724 + 0.846154 NA Intergenic Intergenic 196371 NM_001172509 23314 Hs.516617 NM_015265 ENSG00000119042 SATB2 GLSS SATB homeobox 2 protein-coding 180.846-2 chr2 157410865 157411375 + 0.846154 NA Intergenic L1MEd|LINE|L1 -30611 NR_034169 728066 Hs.470311 NR_034169 FAM133DP - family with sequence similarity 133, member A pseudogene pseudo 152.077 chr1 60191058 60191465 + 0.846154 NA Intergenic L1MC1|LINE|L1 -117491 NM_152377 127795 Hs.47385 NM_152377 ENSG00000162598 C1orf87 CREF chromosome 1 open reading frame 87 protein-coding 179.769-3 chr2 184970163 184970500 + 0.846154 NA Intergenic Intergenic 196741 NR_136319 105373782 Hs.128285 NR_136319 LOC105373782 - uncharacterized LOC105373782 ncRNA 212.923-4 chr8 85971399 85971810 + 0.846154 NA Intergenic Intergenic 98064 NM_033126 85481 Hs.566854 NM_033126 ENSG00000147613 PSKH2 - protein serine kinase H2 protein-coding 152-6 chr2 123988021 123988267 + 0.846154 NA Intergenic L1ME1|LINE|L1 37030 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 200.154-2 chr8 144583826 144584409 + 0.846154 NA intron (NM_025251, intron 1 of 10) intron (NM_025251, intron 1 of 10) 21578 NM_025251 80728 Hs.148988 NM_025251 ENSG00000147799 ARHGAP39 CrGAP|Vilse Rho GTPase activating protein 39 protein-coding 165.231-13 chr5 104167745 104168108 + 0.846154 NA Intergenic Intergenic -605137 NM_031438 83594 Hs.434289 NM_031438 ENSG00000112874 NUDT12 - nudix hydrolase 12 protein-coding 174.923 chr1 177959474 177959859 + 0.846154 NA intron (NM_001356500, intron 7 of 24) MIRc|SINE|MIR 10256 NM_033127 89866 Hs.149540 NM_033127 ENSG00000120341 SEC16B LZTR2|PGPR-p117|RGPR|RGPR-p117|SEC16S SEC16 homolog B, endoplasmic reticulum export factor protein-coding 187.769-3 chr5 43710877 43711277 + 0.846154 NA Intergenic Intergenic -107847 NR_073113 100652772 Hs.482043 NR_073113 NNT-AS1 - NNT antisense RNA 1 ncRNA 158.462-6 chr21 29674787 29675091 + 0.846154 NA intron (NM_001320621, intron 1 of 13) intron (NM_001320621, intron 1 of 13) -73236 NR_027021 642976 Hs.473554 NR_027021 GRIK1-AS1 C21orf9|GRIK1-AS|GRIK1AS|NCRNA00110 GRIK1 antisense RNA 1 ncRNA 157.308-7 chr5 67764568 67764842 + 0.846154 NA Intergenic L2a|LINE|L2 -28508 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA 202.385-2 chr3 179010122 179010615 + 0.846154 NA Intergenic L1MA2|LINE|L1 61441 NM_152240 64393 Hs.371609 NM_022470 ENSG00000172667 ZMAT3 PAG608|WIG-1|WIG1 zinc finger matrin-type 3 protein-coding 202.692-4 chr8 144411199 144411697 + 0.846154 NA TTS (NM_130849).2 TTS (NM_130849).2 -2113 NM_013291 29894 Hs.493202 NM_013291 ENSG00000071894 CPSF1 CPSF160|HSU37012|P/cl.18 cleavage and polyadenylation specific factor 1 protein-coding 174.154-8 chr5 25482173 25482597 + 0.846154 NA Intergenic Intergenic 291432 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 187.077-3 chr6 168444533 168444881 + 0.769231 NA intron (NM_001166412, intron 1 of 12) intron (NM_001166412, intron 1 of 12) 3523 NM_022138 64094 Hs.487200 NM_022138 ENSG00000112562 SMOC2 DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1 SPARC related modular calcium binding 2 protein-coding 178.692-3 chr17 78763252 78763691 + 0.769231 NA intron (NM_004762, intron 1 of 12) MER44A|DNA|TcMar-Tigger 18737 NM_001365039 9267 Hs.191215 NM_004762 ENSG00000108669 CYTH1 B2-1|CYTOHESIN-1|D17S811E|PSCD1|SEC7 cytohesin 1 protein-coding 161.923 chr10 59400016 59400285 + 0.769231 NA Intergenic L1PA7|LINE|L1 -36969 NM_001347842 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding 182.846-3 chr14 73797913 73798477 + 0.769231 NA intron (NR_109995, intron 2 of 2) intron (NR_109995, intron 2 of 2) 10835 NR_109995 100506476 Hs.287299 NR_109995 LOC100506476 - uncharacterized LOC100506476 ncRNA 172.769-2 chr16 10463464 10463887 + 0.769231 NA intron (NM_001256160, intron 8 of 11) MLT1F1|LTR|ERVL-MaLR 64523 NR_149081 106144584 Hs.531561 NR_149081 ENSG00000260468 LINC01290 - long intergenic non-protein coding RNA 1290 ncRNA 239.692 chr1 110358622 110359081 + 0.769231 NA Intergenic Intergenic 19528 NM_022768 64783 Hs.435947 NM_022768 ENSG00000162775 RBM15 OTT|OTT1|SPEN RNA binding motif protein 15 protein-coding 174.154-7 chr2 144791164 144791561 + 0.769231 NA intron (NR_033870, intron 2 of 4) Tigger1|DNA|TcMar-Tigger 123395 NR_033870 401014 Hs.742290 NR_033870 ENSG00000226674 TEX41 DKFZp686O1327|LINC00953 testis expressed 41 ncRNA 202.923-4 chr2 69618061 69618606 + 0.769231 NA intron (NM_014911, intron 2 of 21) intron (NM_014911, intron 2 of 21) 25406 NM_014911 22848 Hs.468878 NM_014911 ENSG00000115977 AAK1 - AP2 associated kinase 1 protein-coding 167.308-5 chr2 105831083 105831493 + 0.769231 NA intron (NM_003581, intron 2 of 4) L1M2|LINE|L1 -20559 NM_001004720 8440 Hs.529244 NM_003581 ENSG00000071051 NCK2 GRB4|NCKbeta NCK adaptor protein 2 protein-coding 174.923-3 chr20 52169096 52169484 + 0.769231 NA intron (NM_199427, intron 2 of 8) intron (NM_199427, intron 2 of 8) 22489 NM_199426 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding 164.231-8 chr3 118766762 118767110 + 0.769231 NA intron (NR_135547, intron 1 of 3) intron (NR_135547, intron 1 of 3) 43897 NR_135547 105374060 Hs.99062 NR_135547 LOC105374060 - uncharacterized LOC105374060 ncRNA 188.308-7 chr6 121297894 121298337 + 0.769231 NA intron (NR_104452, intron 10 of 35) intron (NR_104452, intron 10 of 35) 36365 NM_152730 221322 Hs.121396 NM_152730 ENSG00000146350 TBC1D32 BROMI|C6orf170|C6orf171 TBC1 domain family member 32 protein-coding 188.769 chr10 23046556 23047272 + 0.769231 NA Intergenic Intergenic -48665 NM_012228 22921 Hs.461420 NM_012228 ENSG00000148450 MSRB2 CBS-1|CBS1|CGI-131|MSRB|PILB methionine sulfoxide reductase B2 protein-coding 203.769 chr17 51938936 51939470 + 0.769231 NA intron (NM_001082533, intron 3 of 9) L1ME3G|LINE|L1 219511 NM_020178 56934 Hs.463466 NM_020178 ENSG00000154975 CA10 CA-RPX|CARPX|HUCEP-15 carbonic anhydrase 10 protein-coding 200.231 chr11 67290811 67291320 + 0.769231 NA intron (NM_207354, intron 3 of 14) intron (NM_207354, intron 3 of 14) 1762 NM_207354 338692 Hs.438673 NM_207354 ENSG00000172932 ANKRD13D - ankyrin repeat domain 13D protein-coding 190.769-2 chr14 43776215 43776514 + 0.769231 NA Intergenic L1PA13|LINE|L1 730919 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 206.077-5 chr3 145086977 145087394 + 0.769231 NA Intergenic MLT1A1|LTR|ERVL-MaLR 982000 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA 183.846-4 chr6 21627872 21628243 + 0.769231 NA Intergenic AluSq|SINE|Alu 34306 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY-box transcription factor 4 protein-coding 165.077-6 chr3 132112282 132112637 + 0.769231 NA Intergenic L1MA3|LINE|L1 -72853 NM_153429 131034 Hs.199877 NM_130808 ENSG00000196353 CPNE4 COPN4|CPN4 copine 4 protein-coding 190 chr11 40879027 40879306 + 0.769231 NA intron (NM_020929, intron 1 of 4) intron (NM_020929, intron 1 of 4) 580470 NM_020929 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 196-8 chr4 160372614 160372961 + 0.769231 NA Intergenic Charlie2a|DNA|hAT-Charlie -595003 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA 161.308-14 chr8 124940209 124940771 + 0.769231 NA Intergenic LTR86A1|LTR|ERVL -1518 NR_027321 157381 Hs.638933 NR_027321 ENSG00000249816 LINC00964 - long intergenic non-protein coding RNA 964 ncRNA 179.692-4 chr12 7718441 7718766 + 0.769231 NA Intergenic MER21B|LTR|ERVL 7170 NM_199286 359787 Hs.131358 NM_199286 ENSG00000187569 DPPA3 Pgc7|STELLA developmental pluripotency associated 3 protein-coding 176.615-6 chr5 129854640 129855022 + 0.769231 NA Intergenic Intergenic -49634 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding 213.461 chr11 87508397 87508928 + 0.769231 NA Intergenic Intergenic 210749 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA 182.154-7 chr6 93360303 93360814 + 0.769231 NA intron (NM_004440, intron 3 of 16) intron (NM_004440, intron 3 of 16) 59001 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding 265.462 chr5 113549428 113550063 + 0.769231 NA intron (NM_001345975, intron 11 of 28) L2a|LINE|L2 36051 NM_001345976 64848 Hs.231942 NM_022828 ENSG00000047188 YTHDC2 CAHL|hYTHDC2 YTH domain containing 2 protein-coding 154.615-2 chr1 223796146 223796381 + 0.769231 NA exon (NM_001031685, exon 13 of 18) exon (NM_001031685, exon 13 of 18) 49684 NM_001031685 7159 Hs.523968 NM_005426 ENSG00000143514 TP53BP2 53BP2|ASPP2|BBP|P53BP2|PPP1R13A tumor protein p53 binding protein 2 protein-coding 197.615-4 chr8 86323770 86324156 + 0.769231 NA Intergenic Intergenic -18584 NM_007013 11059 Hs.655189 NM_007013 ENSG00000123124 WWP1 AIP5|Tiul1|hSDRP1 WW domain containing E3 ubiquitin protein ligase 1 protein-coding 171.692-7 chr5 115991300 115991777 + 0.769231 NA intron (NM_173800, intron 4 of 19) L1MD3|LINE|L1 29063 NM_173800 206338 Hs.98288 NM_173800 ENSG00000172901 LVRN APQ|AQPEP|TAQPEP laeverin protein-coding 202.615 chr2 22112911 22113420 + 0.769231 NA Intergenic L1MB7|LINE|L1 -402513 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA 153.462-2 chr14 46902512 46903018 + 0.769231 NA intron (NM_001113498, intron 10 of 16) intron (NM_001113498, intron 10 of 16) -250984 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding 188.769-3 chr8 57830217 57830807 + 0.769231 NA Intergenic Intergenic 84363 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA 196-9 chr5 27169300 27169663 + 0.769231 NA Intergenic MLT1D|LTR|ERVL-MaLR -130895 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 169.692 chr1 99350671 99351171 + 0.769231 NA Intergenic L1ME3G|LINE|L1 86629 NM_014839 9890 Hs.13245 NM_014839 ENSG00000117600 PLPPR4 LPPR4|LPR4|PHP1|PRG-1|PRG1 phospholipid phosphatase related 4 protein-coding 201.692 chr10 48402164 48402736 + 0.769231 NA intron (NM_001323302, intron 4 of 13) intron (NM_001323302, intron 4 of 13) 838 NM_001278548 5599 Hs.138211 NM_002750 ENSG00000107643 MAPK8 JNK|JNK-46|JNK1|JNK1A2|JNK21B1/2|PRKM8|SAPK1|SAPK1c mitogen-activated protein kinase 8 protein-coding 162.615-9 chr8 91686600 91686928 + 0.769231 NA Intergenic L1MA9|LINE|L1 330916 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 155.692-2 chr14 47308977 47309356 + 0.769231 NA intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) 34080 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 200-2 chr21 17359803 17360305 + 0.769231 NA Intergenic ERVL-E-int|LTR|ERVL -78836 NR_037585 100505929 Hs.46707 NM_001005521 ENSG00000232560 LINC01549 C21orf37 long intergenic non-protein coding RNA 1549 ncRNA 183.231-10 chr7 87738168 87738633 + 0.769231 NA intron (NM_138290, intron 5 of 11) intron (NM_138290, intron 5 of 11) -25077 NM_001348945 5243 Hs.489033 NM_000927 ENSG00000085563 ABCB1 ABC20|CD243|CLCS|GP170|MDR1|P-GP|PGY1 ATP binding cassette subfamily B member 1 protein-coding 153.769-5 chr6 5478739 5478991 + 0.769231 NA intron (NM_006567, intron 4 of 6) intron (NM_006567, intron 4 of 6) -20790 NR_125848 101927972 Hs.668417 NR_125846 ENSG00000269985 LOC101927972 - uncharacterized LOC101927972 ncRNA 185.231-6 chr5 33664293 33664720 + 0.769231 NA intron (NM_001324512, intron 5 of 21) L1MA8|LINE|L1 223730 NR_047677 6897 Hs.481860 NM_152295 ENSG00000113407 TARS ThrRS threonyl-tRNA synthetase protein-coding 202.385-3 chr6 81629266 81629694 + 0.769231 NA Intergenic L1MEd|LINE|L1 123201 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding 225.923-4 chr7 92569711 92570170 + 0.769231 NA intron (NM_152789, intron 8 of 10) intron (NM_152789, intron 8 of 10) 20109 NM_001288584 257415 Hs.18564 NM_152789 ENSG00000234545 FAM133B - family with sequence similarity 133 member B protein-coding 176.615-2 chr18 4015931 4016388 + 0.769231 NA intron (NM_001242761, intron 2 of 11) intron (NM_001242761, intron 2 of 11) 53806 NR_102696 101410534 Hs.141055 NR_102696 ENSG00000263878 DLGAP1-AS4 - DLGAP1 antisense RNA 4 ncRNA 198.923-4 chr6 56631385 56631841 + 0.769231 NA intron (NM_001144770, intron 26 of 94) intron (NM_001144770, intron 26 of 94) 11276 NM_001723 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding 236.462 chr2 124171213 124171650 + 0.769231 NA intron (NM_130773, intron 1 of 23) intron (NM_130773, intron 1 of 23) 146144 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 152.385-6 chr7 101974772 101974985 + 0.769231 NA intron (NM_001202544, intron 2 of 21) intron (NM_001202544, intron 2 of 21) 157252 NM_181552 1523 Hs.191482 NM_001913 ENSG00000257923 CUX1 CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GDDI|GOLIM6|Nbla10317|p100|p110|p200|p75 cut like homeobox 1 protein-coding 196-11 chr8 122527733 122528235 + 0.769231 NA intron (NR_131202, intron 2 of 3) AluSx1|SINE|Alu 40660 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 178.923-3 chr13 52697600 52697955 + 0.769231 NA 3' UTR (NM_006704, exon 13 of 13) 3' UTR (NM_006704, exon 13 of 13) 42043 NM_007015 11061 Hs.421391 NM_007015 ENSG00000136110 CNMD BRICD3|CHM-I|CHM1|LECT1|MYETS1 chondromodulin protein-coding 158.462 chr1 96005276 96005706 + 0.769231 NA intron (NR_125991, intron 3 of 4) L1MC3|LINE|L1 13423 NR_125991 102723661 Hs.143911 NR_125991 ENSG00000237435 LINC02790 - long intergenic non-protein coding RNA 2790 ncRNA 204.923-7 chr8 49607161 49607608 + 0.769231 NA Intergenic L1MEf|LINE|L1 -95204 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA 167-6 chrX 51471840 51472095 + 0.769231 NA Intergenic L1MB8|LINE|L1 24625 NM_018159 55190 Hs.200016 NM_018159 ENSG00000196368 NUDT11 APS1|ASP1|DIPP3b|DIPP3beta|hDIPP3beta nudix hydrolase 11 protein-coding 157.077-6 chr2 122752967 122753209 + 0.769231 NA Intergenic Intergenic 320393 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 167.231-5 chr4 107759544 107759932 + 0.769231 NA Intergenic Intergenic -39504 NM_005443 9061 Hs.368610 NM_005443 ENSG00000138801 PAPSS1 ATPSK1|PAPSS|SK1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding 169-2 chr1 179187730 179188095 + 0.769231 NA intron (NM_007314, intron 1 of 11) L2a|LINE|L2 41765 NM_001168238 27 Hs.159472 NM_005158 ENSG00000143322 ABL2 ABLL|ARG ABL proto-oncogene 2, non-receptor tyrosine kinase protein-coding 191.846-2 chr3 76076459 76076842 + 0.769231 NA Intergenic Intergenic -291101 NM_001290209 100131827 Hs.556877 NM_001128223 ENSG00000227124 ZNF717 OB1|X17|ZNF838 zinc finger protein 717 protein-coding 163.846-10 chr4 115777045 115777354 + 0.769231 NA Intergenic MLT1C|LTR|ERVL-MaLR -522526 NR_031737 100302290 NR_031737 ENSG00000284253 MIR1973 hsa-mir-1973|mir-1973 microRNA 1973 ncRNA 192-2 chr14 78830071 78830503 + 0.769231 NA intron (NM_004796, intron 7 of 16) intron (NM_004796, intron 7 of 16) -369695 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA 167.462 chr21 16820424 16820894 + 0.769231 NA Intergenic Intergenic 230422 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA 202.154-2 chr10 18207426 18207968 + 0.769231 NA intron (NM_201593, intron 2 of 13) intron (NM_201593, intron 2 of 13) -53025 NM_001330060 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding 189.077-5 chr7 7167541 7167923 + 0.769231 NA Intergenic Intergenic -14883 NM_020156 56913 Hs.239666 NM_020156 ENSG00000106392 C1GALT1 C1GALT|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding 173.385-3 chr2 156610565 156610857 + 0.769231 NA Intergenic Intergenic 174332 NM_000408 2820 Hs.512382 NM_000408 ENSG00000115159 GPD2 GDH2|GPDM|mGPDH glycerol-3-phosphate dehydrogenase 2 protein-coding 163.231-8 chr6 119714770 119715144 + 0.769231 NA intron (NR_134600, intron 2 of 3) ERVL-B4-int|LTR|ERVL 165149 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA 173.538-8 chr6 165441828 165442278 + 0.769231 NA intron (NM_006661, intron 6 of 22) intron (NM_006661, intron 6 of 22) -132448 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding 161.385-2 chr22 37437558 37437969 + 0.769231 NA Intergenic AluSq2|SINE|Alu -10284 NM_052906 114794 Hs.344170 NM_052906 ENSG00000166897 ELFN2 LRRC62|PPP1R29 extracellular leucine rich repeat and fibronectin type III domain containing 2 protein-coding 191.231-3 chr2 208169614 208169862 + 0.769231 NA intron (NM_001099334, intron 8 of 8) AluSg|SINE|Alu -6149 NM_014617 1418 Hs.122566 NM_014617 ENSG00000168582 CRYGA CRY-g-A|CRYG1|CRYG5 crystallin gamma A protein-coding 175.538 chr14 46646511 46646833 + 0.769231 NA Intergenic Intergenic 5109 NM_080746 140801 Hs.308332 NM_080746 ENSG00000165496 RPL10L RPL10_5_1358 ribosomal protein L10 like protein-coding 224.308 chr12 46774562 46775192 + 0.769231 NA intron (NM_018018, intron 14 of 16) intron (NM_018018, intron 14 of 16) 51120 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding 154.692-4 chr20 62333960 62334424 + 0.769231 NA exon (NM_005560, exon 22 of 80) exon (NM_005560, exon 22 of 80) -1635 NR_039915 100616340 NR_039915 ENSG00000284074 MIR4758 - microRNA 4758 ncRNA 171.846-2 chr4 44230879 44231334 + 0.769231 NA intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 214044 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA 183.846-5 chr6 62906490 62906887 + 0.769231 NA Intergenic L1MA2|LINE|L1 413289 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding 196.462-4 chr5 13799471 13799831 + 0.769231 NA intron (NM_001369, intron 47 of 78) intron (NM_001369, intron 47 of 78) 144829 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 180.308-4 chr3 86749508 86749891 + 0.769231 NA Intergenic Intergenic 241450 NM_016206 389136 Hs.606507 NM_016206 ENSG00000206538 VGLL3 VGL-3|VGL3 vestigial like family member 3 protein-coding 225.385-3 chr9 73307979 73308386 + 0.769231 NA Intergenic Intergenic 156317 NM_000700 301 Hs.494173 NM_000700 ENSG00000135046 ANXA1 ANX1|LPC1 annexin A1 protein-coding 170.154-3 chr5 30419482 30419736 + 0.769231 NA Intergenic Intergenic 539049 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 288.231 chr8 119062986 119063679 + 0.769231 NA intron (NR_134297, intron 1 of 1) MLT1C|LTR|ERVL-MaLR -3915 NM_006438 10584 Hs.176615 NM_006438 ENSG00000184374 COLEC10 3MC3|CL-34|CLL1 collectin subfamily member 10 protein-coding 201.154-2 chr14 55982021 55982536 + 0.769231 NA Intergenic MIR|SINE|MIR -136133 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding 151.769-5 chr14 43365820 43366202 + 0.769231 NA Intergenic L1MD1|LINE|L1 1141272 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 161-6 chr5 38201479 38201876 + 0.769231 NA Intergenic LTR33A|LTR|ERVL 53197 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA 155.385-5 chr14 53002088 53002425 + 0.769231 NA Intergenic LTR33|LTR|ERVL -51159 NM_001134999 10979 Hs.509343 NM_006832 ENSG00000073712 FERMT2 KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2 fermitin family member 2 protein-coding 162.769-3 chr20 46891067 46891388 + 0.769231 NA Intergenic Intergenic -3397 NM_172110 2139 Hs.472877 NM_005244 ENSG00000064655 EYA2 EAB1 EYA transcriptional coactivator and phosphatase 2 protein-coding 211.231 chr5 125950014 125950586 + 0.769231 NA Intergenic Intergenic -229277 NR_105042 102546228 Hs.582529 NR_105042 ENSG00000248107 LINC02039 - long intergenic non-protein coding RNA 2039 ncRNA 203.077 chr11 99577182 99577671 + 0.769231 NA intron (NM_175566, intron 1 of 21) intron (NM_175566, intron 1 of 21) 21281 NM_175566 53942 Hs.656783 NM_014361 ENSG00000149972 CNTN5 HNB-2s|NB-2 contactin 5 protein-coding 180-5 chr5 64827695 64828010 + 0.769231 NA intron (NM_005869, intron 10 of 13) Tigger7|DNA|TcMar-Tigger 58922 NM_001364478 10283 Hs.371372 NM_005869 ENSG00000153015 CWC27 NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10 CWC27 spliceosome associated cyclophilin protein-coding 195.692-4 chr4 93945033 93945337 + 0.769231 NA Intergenic L1PA11|LINE|L1 116432 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding 187.539-2 chr3 35045941 35046184 + 0.769231 NA intron (NR_110817, intron 2 of 3) intron (NR_110817, intron 2 of 3) 347961 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 257.538 chr2 33324287 33324896 + 0.769231 NA intron (NM_001166264, intron 20 of 28) intron (NM_001166264, intron 20 of 28) -93925 NR_039628 100616136 NR_039628 ENSG00000283591 MIR4430 - microRNA 4430 ncRNA 167.308-3 chr16 1347451 1347738 + 0.769231 NA exon (NM_001199098, exon 30 of 34) exon (NM_001199098, exon 30 of 34) 4284 NM_001001410 115939 Hs.134846 NM_001001410 ENSG00000007520 TSR3 C16orf42 TSR3 ribosome maturation factor protein-coding 153.692-4 chr2 188943008 188943336 + 0.769231 NA Intergenic Intergenic -31201 NM_000090 1281 Hs.443625 NM_000090 ENSG00000168542 COL3A1 EDS4A|EDSVASC|PMGEDSV collagen type III alpha 1 chain protein-coding 208.461 chr6 50108695 50109187 + 0.769231 NA Intergenic HAL1M8|LINE|L1 -59012 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding 190.615-9 chr7 27591659 27592165 + 0.769231 NA intron (NM_152740, intron 4 of 7) intron (NM_152740, intron 4 of 7) -24062 NR_122123 790953 Hs.571330 NR_122122 TSL - testis-expressed, seven-twelve, leukemia ncRNA 161.154-2 chr3 9323066 9323561 + 0.769231 NA Intergenic L1ME1|LINE|L1 -39741 NM_001114092 25917 Hs.443081 NM_015453 ENSG00000134077 THUMPD3 - THUMP domain containing 3 protein-coding 159.769-12 chr7 48536700 48537065 + 0.769231 NA intron (NM_152701, intron 55 of 61) intron (NM_152701, intron 55 of 61) 365424 NM_152701 154664 Hs.226568 NM_152701 ENSG00000179869 ABCA13 - ATP binding cassette subfamily A member 13 protein-coding 165.462-4 chr8 129520679 129521045 + 0.769231 NA intron (NR_130917, intron 1 of 3) L1MA2|LINE|L1 -36720 NR_037457 100500839 NR_037457 ENSG00000263763 MIR3686 - microRNA 3686 ncRNA 170.077-2 chr11 25967582 25968023 + 0.769231 NA Intergenic L1MA8|LINE|L1 -221321 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding 180.692-6 chr2 43463669 43463920 + 0.769231 NA intron (NM_001083953, intron 26 of 37) intron (NM_001083953, intron 26 of 37) 132180 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding 206.154-3 chrX 116755223 116755716 + 0.769231 NA Intergenic Intergenic 62391 NR_145523 100126447 Hs.695847 NR_145523 LOC100126447 - uncharacterized LOC100126447 ncRNA 161.692-8 chr6 38883651 38884017 + 0.769231 NA intron (NM_001371, intron 54 of 91) intron (NM_001371, intron 54 of 91) 69273 NR_038401 100131047 Hs.670957 NR_038401 LOC100131047 - uncharacterized LOC100131047 ncRNA 159.538 chr1 117908038 117908333 + 0.769231 NA intron (NM_001135589, intron 5 of 12) L2c|LINE|L2 21436 NM_001135589 54834 Hs.310809 NM_017686 ENSG00000196505 GDAP2 MACROD3|SCAR27 ganglioside induced differentiation associated protein 2 protein-coding 176.692-7 chr4 179618430 179618776 + 0.769231 NA Intergenic Intergenic 1540546 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA 202.154-4 chr11 34834957 34835374 + 0.769231 NA Intergenic L1MB3|LINE|L1 -80965 NM_001135024 8050 Hs.502315 NM_003477 ENSG00000110435 PDHX DLDBP|E3BP|OPDX|PDHXD|PDX1|proX pyruvate dehydrogenase complex component X protein-coding 190-6 chr8 126767720 126768202 + 0.769231 NA Intergenic Intergenic -209483 NM_174911 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 160.769-4 chr15 81778444 81778738 + 0.769231 NA Intergenic MLT1D|LTR|ERVL-MaLR 267427 NM_032246 84206 Hs.104744 NM_032246 ENSG00000183496 MEX3B MEX-3B|RKHD3|RNF195 mex-3 RNA binding family member B protein-coding 235-2 chr8 138426989 138427461 + 0.769231 NA intron (NM_001362965, intron 1 of 19) L1ME3A|LINE|L1 70036 NM_015912 51059 Hs.126024 NM_015912 ENSG00000147724 FAM135B C8ORFK32 family with sequence similarity 135 member B protein-coding 203.846-3 chr5 94223515 94223857 + 0.769231 NA intron (NM_001145678, intron 20 of 20) intron (NM_001145678, intron 20 of 20) -111987 NR_028080 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding 194.769-2 chr20 51705288 51705660 + 0.769231 NA intron (NM_006045, intron 4 of 27) intron (NM_006045, intron 4 of 27) 62916 NM_006045 10079 Hs.649234 NM_006045 ENSG00000054793 ATP9A ATPIIA ATPase phospholipid transporting 9A (putative) protein-coding 160.385-6 chr3 97318704 97319002 + 0.769231 NA intron (NM_001080448, intron 5 of 17) intron (NM_001080448, intron 5 of 17) -120754 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 244.308 chr12 3650931 3651450 + 0.769231 NA intron (NM_001144958, intron 10 of 19) L1ME4b|LINE|L1 101919 NM_032680 84766 Hs.504534 NM_032680 ENSG00000130038 CRACR2A EFCAB4B calcium release activated channel regulator 2A protein-coding 212.846 chr6 35636593 35636951 + 0.769231 NA intron (NM_001145775, intron 4 of 11) Charlie1a|DNA|hAT-Charlie 28017 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA 166.308-4 chr2 164910404 164910711 + 0.769231 NA intron (NM_001199148, intron 9 of 10) intron (NM_001199148, intron 9 of 10) 44968 NM_173512 151258 Hs.658702 NM_173512 ENSG00000169507 SLC38A11 AVT2 solute carrier family 38 member 11 protein-coding 185.846-4 chr22 25009971 25010517 + 0.769231 NA Intergenic AluSx3|SINE|Alu -17730 NM_001145206 85379 Hs.419171 NM_001145206 ENSG00000197077 KIAA1671 - KIAA1671 protein-coding 197.462 chr1 68061111 68061443 + 0.769231 NA intron (NR_040077, intron 2 of 9) L1PA13|LINE|L1 -9646 NM_004675 9077 Hs.194695 NM_004675 ENSG00000162595 DIRAS3 ARHI|NOEY2 DIRAS family GTPase 3 protein-coding 170.461-2 chr2 156310801 156311217 + 0.769231 NA Intergenic Intergenic 21712 NM_006186 4929 Hs.563344 NM_006186 ENSG00000153234 NR4A2 HZF-3|NOT|NURR1|RNR1|TINUR nuclear receptor subfamily 4 group A member 2 protein-coding 246.692 chr7 84996616 84996969 + 0.769231 NA 3' UTR (NM_152754, exon 17 of 17) 3' UTR (NM_152754, exon 17 of 17) 125139 NM_152754 223117 Hs.201340 NM_152754 ENSG00000153993 SEMA3D Sema-Z2|coll-2 semaphorin 3D protein-coding 156.538 chr1 190894310 190894705 + 0.769231 NA Intergenic Intergenic 269617 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA 178-2 chr3 112756868 112757159 + 0.769231 NA Intergenic Tigger3a|DNA|TcMar-Tigger -7694 NR_110017 101929694 Hs.385630 NR_110017 ENSG00000240893 LINC02042 - long intergenic non-protein coding RNA 2042 ncRNA 203.154 chr22 35565231 35565684 + 0.769231 NA Intergenic Intergenic 24626 NM_014310 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding 217.231-2 chr4 54785100 54785471 + 0.769231 NA Intergenic Intergenic 127357 NM_000222 3815 Hs.479754 NM_000222 ENSG00000157404 KIT C-Kit|CD117|MASTC|PBT|SCFR KIT proto-oncogene, receptor tyrosine kinase protein-coding 155-2 chr14 20247644 20247977 + 0.769231 NA Intergenic Intergenic 5018 NM_001004479 390442 Hs.553767 NM_001004479 ENSG00000176198 OR11H4 OR14-36 olfactory receptor family 11 subfamily H member 4 protein-coding 276.846 chr12 23709403 23709951 + 0.769231 NA intron (NM_152989, intron 9 of 17) intron (NM_152989, intron 9 of 17) -125091 NM_178010 6660 Hs.434948 NM_006940 ENSG00000134532 SOX5 L-SOX5|L-SOX5B|L-SOX5F|LAMSHF SRY-box transcription factor 5 protein-coding 173-2 chr15 33166449 33166673 + 0.769231 NA intron (NM_001277313, intron 3 of 20) intron (NM_001277313, intron 3 of 20) 28153 NM_001277314 342184 Hs.657649 NM_198500 ENSG00000248905 FMN1 FMN|LD formin 1 protein-coding 172.923-4 chr2 180368180 180368565 + 0.769231 NA Intergenic Intergenic -323732 NR_104322 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA 196.154 chr11 34128674 34129148 + 0.769231 NA intron (NM_001144030, intron 10 of 26) L1ME1|LINE|L1 23282 NM_001144030 55226 Hs.577281 NM_024662 ENSG00000135372 NAT10 ALP|Kre33|NET43 N-acetyltransferase 10 protein-coding 163.846-3 chr11 121957779 121958184 + 0.769231 NA Intergenic Intergenic 141863 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA 221.077 chr1 176154602 176155121 + 0.769231 NA intron (NM_001286644, intron 3 of 17) intron (NM_001286644, intron 3 of 17) 52383 NM_001286644 64326 Hs.523744 NM_022457 ENSG00000143207 COP1 RFWD2|RNF200 COP1 E3 ubiquitin ligase protein-coding 159.077-10 chr6 76152002 76152227 + 0.769231 NA Intergenic Intergenic -79436 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 163.846-4 chr12 1081699 1082004 + 0.769231 NA intron (NR_027949, intron 2 of 15) L1MB1|LINE|L1 54103 NM_001301248 23085 Hs.601216 NM_178039 ENSG00000082805 ERC1 Cast2|ELKS|ERC-1|RAB6IP2 ELKS/RAB6-interacting/CAST family member 1 protein-coding 182 chr1 118496323 118496618 + 0.769231 NA Intergenic L1M4a1|LINE|L1 -311242 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 174.154-2 chr1 215764549 215764888 + 0.769231 NA intron (NM_206933, intron 56 of 71) intron (NM_206933, intron 56 of 71) 197414 NM_016121 51133 Hs.335139 NM_016121 ENSG00000136636 KCTD3 NY-REN-45 potassium channel tetramerization domain containing 3 protein-coding 222.231 chr2 75057499 75058447 + 0.769231 NA intron (NM_015727, intron 2 of 3) intron (NM_015727, intron 2 of 3) -32839 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA 167.539 chr11 21301943 21302208 + 0.769231 NA intron (NM_201551, intron 14 of 18) MLT1H2|LTR|ERVL-MaLR 632489 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding 160.615 chr1 185189459 185189833 + 0.769231 NA intron (NM_017673, intron 9 of 18) intron (NM_017673, intron 9 of 18) 32479 NM_017673 54823 Hs.134183 NM_017673 ENSG00000116668 SWT1 C1orf26|HsSwt1 SWT1 RNA endoribonuclease homolog protein-coding 156.923-8 chr2 49565460 49565698 + 0.769231 NA Intergenic Intergenic 408624 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 170.308-8 chr8 83336202 83336477 + 0.769231 NA Intergenic Intergenic -67419 NR_122034 103352670 Hs.399852 NR_122034 ENSG00000253898 LINC01419 LVCAT7|TCONS_00014497 long intergenic non-protein coding RNA 1419 ncRNA 168.385-2 chr11 90387706 90388114 + 0.769231 NA intron (NR_104190, intron 1 of 6) intron (NR_104190, intron 1 of 6) 136678 NR_104190 101929222 Hs.616763 NR_104190 ENSG00000261645 DISC1FP1 Boymaw DISC1 fusion partner 1 ncRNA 184.231-4 chr6 39596564 39597014 + 0.769231 NA intron (NM_001289020, intron 6 of 21) L1ME3Cz|LINE|L1 128619 NM_145027 221458 Hs.588202 NM_145027 ENSG00000164627 KIF6 C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1 kinesin family member 6 protein-coding 188.846-2 chr5 44361114 44361481 + 0.769231 NA intron (NM_004465, intron 1 of 2) intron (NM_004465, intron 1 of 2) -27435 NR_108034 101927075 Hs.617390 NR_108034 ENSG00000248464 FGF10-AS1 - FGF10 antisense RNA 1 ncRNA 183.615-12 chr9 135896390 135896727 + 0.769231 NA intron (NM_015447, intron 1 of 16) L1MDb|LINE|L1 10988 NM_015447 157922 Hs.522493 NM_015447 ENSG00000130559 CAMSAP1 - calmodulin regulated spectrin associated protein 1 protein-coding 190.769-4 chr2 120838935 120839220 + 0.769231 NA intron (NM_005270, intron 2 of 13) intron (NM_005270, intron 2 of 13) 46796 NM_005270 2736 Hs.111867 NM_005270 ENSG00000074047 GLI2 CJS|HPE9|PHS2|THP1|THP2 GLI family zinc finger 2 protein-coding 153.692-6 chr4 66120704 66121163 + 0.769231 NA Intergenic MLT2C1|LTR|ERVL -155891 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 184.462-2 chr21 27296896 27297329 + 0.769231 NA Intergenic L1MDa|LINE|L1 -330024 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 155.385-14 chr6 126925058 126925333 + 0.769231 NA Intergenic Intergenic -193476 NM_032784 84870 Hs.135254 NM_032784 ENSG00000146374 RSPO3 CRISTIN1|PWTSR|THSD2 R-spondin 3 protein-coding 196.308-4 chr9 70684464 70684882 + 0.769231 NA intron (NM_001366143, intron 8 of 25) intron (NM_001366143, intron 8 of 25) 125411 NR_029621 406987 NR_029621 ENSG00000207935 MIR204 MIRN204|RDICC|miRNA204|mir-204 microRNA 204 ncRNA 188 chr2 27528536 27528930 + 0.769231 NA Intergenic L1M1|LINE|L1 31894 NM_001486 2646 Hs.89771 NM_001486 ENSG00000084734 GCKR FGQTL5|GKRP glucokinase regulator protein-coding 193.615-5 chr7 120861077 120861396 + 0.769231 NA Intergenic Intergenic -3092 NM_012338 23554 Hs.16529 NM_012338 ENSG00000106025 TSPAN12 EVR5|NET-2|NET2|TM4SF12 tetraspanin 12 protein-coding 166.154-5 chr22 43675405 43675903 + 0.769231 NA intron (NM_198856, intron 11 of 29) (TATAATA)n|Simple_repeat|Simple_repeat 136651 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding 181.615-4 chr17 59826337 59826704 + 0.769231 NA intron (NM_001329400, intron 8 of 9) intron (NM_001329400, intron 8 of 9) -14746 NR_029493 406991 Hs.444569 NR_029493 ENSG00000284190 MIR21 MIRN21|hsa-mir-21|miR-21|miRNA21 microRNA 21 ncRNA 155.538-6 chr14 68804820 68805118 + 0.769231 NA Intergenic L1MD|LINE|L1 -8726 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding 207.846-2 chr12 9857344 9857801 + 0.769231 NA exon (NM_005127, exon 3 of 5) exon (NM_005127, exon 3 of 5) 12287 NM_005127 9976 Hs.85201 NM_005127 ENSG00000110852 CLEC2B AICL|CLECSF2|HP10085|IFNRG1 C-type lectin domain family 2 member B protein-coding 154-10 chr7 131558450 131558877 + 0.769231 NA Intergenic Intergenic -2035 NM_001018111 5420 Hs.744213 NM_005397 ENSG00000128567 PODXL Gp200|PC|PCLP|PCLP-1 podocalyxin like protein-coding 186.154-3 chr5 50339344 50339893 + 0.769231 NA Intergenic L1MA3|LINE|L1 101670 NM_198449 133418 Hs.561411 NM_198449 ENSG00000170571 EMB GP70 embigin protein-coding 158.615-4 chr2 68449383 68449689 + 0.769231 NA Intergenic L1PB1|LINE|L1 17758 NR_133923 554251 Hs.164117 NM_001024680 ENSG00000204923 FBXO48 - F-box protein 48 protein-coding 222.308 chr4 100694691 100695043 + 0.769231 NA Intergenic Intergenic -19754 NR_046811 100874275 Hs.136318 NR_046811 ENSG00000250223 LINC01216 EMCN-IT3 long intergenic non-protein coding RNA 1216 ncRNA 213.308 chr10 10828777 10829677 + 0.769231 NA intron (NM_001326327, intron 1 of 14) intron (NM_001326327, intron 1 of 14) 30502 NM_001326328 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding 178.077-6 chr3 107032580 107032941 + 0.769231 NA Intergenic L1ME1|LINE|L1 207878 NR_028303 100302640 Hs.648607 NR_028303 ENSG00000242759 LINC00882 - long intergenic non-protein coding RNA 882 ncRNA 202.615-5 chr5 86176044 86176481 + 0.769231 NA Intergenic MamTip2|DNA|hAT-Tip100 -106182 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 191.231-5 chr6 77041116 77041646 + 0.769231 NA Intergenic Intergenic 422641 NM_000863 3351 Hs.123016 NM_000863 ENSG00000135312 HTR1B 5-HT-1B|5-HT-1D-beta|5-HT1B|5-HT1DB|HTR1D2|HTR1DB|S12 5-hydroxytryptamine receptor 1B protein-coding 172.308 chr1 208555681 208556187 + 0.769231 NA Intergenic Intergenic -172754 NR_146914 105372893 Hs.568720 NR_146914 ENSG00000232812 LINC01717 - long intergenic non-protein coding RNA 1717 ncRNA 205 chr7 79257763 79258122 + 0.769231 NA intron (NM_001301128, intron 1 of 20) intron (NM_001301128, intron 1 of 20) -195015 NR_038345 100505881 Hs.31474 NR_038343 ENSG00000234456 MAGI2-AS3 - MAGI2 antisense RNA 3 ncRNA 211.538-2 chr5 102263483 102263960 + 0.769231 NA exon (NM_180991, exon 4 of 13) exon (NM_180991, exon 4 of 13) 32563 NM_180991 353189 Hs.127648 NM_180991 ENSG00000173930 SLCO4C1 OATP-H|OATP-M1|OATP4C1|OATPX|PRO2176|SLC21A20 solute carrier organic anion transporter family member 4C1 protein-coding 171.385-4 chr21 18496520 18496890 + 0.769231 NA Intergenic Intergenic -92920 NM_002772 5651 Hs.149473 NM_002772 ENSG00000154646 TMPRSS15 ENTK|PRSS7 transmembrane serine protease 15 protein-coding 169.692-4 chr13 61359949 61360388 + 0.769231 NA Intergenic MIR|SINE|MIR 55354 NM_022843 64881 Hs.391781 NM_022843 ENSG00000280165 PCDH20 PCDH13 protocadherin 20 protein-coding 162.308-5 chr6 2667176 2667444 + 0.769231 NA 3' UTR (NM_001347872, exon 13 of 13) 3' UTR (NM_001347872, exon 13 of 13) -32707 NR_131168 154386 Hs.680574 NM_152554 ENSG00000164385 LINC01600 C6orf195|bA145H9.2 long intergenic non-protein coding RNA 1600 ncRNA 161.231-6 chr3 143042891 143043122 + 0.769231 NA intron (NM_001080415, intron 23 of 27) intron (NM_001080415, intron 23 of 27) 41436 NM_001320219 23350 Hs.596572 NM_001080415 ENSG00000163714 U2SURP SR140|fSAPa U2 snRNP associated SURP domain containing protein-coding 153.385-3 chr3 170379528 170379743 + 0.769231 NA intron (NM_001145097, intron 1 of 5) AluSx|SINE|Alu 20012 NM_001248008 6498 Hs.536655 NM_005414 ENSG00000136603 SKIL SNO|SnoA|SnoI|SnoN SKI like proto-oncogene protein-coding 164.615-11 chr4 62472802 62473238 + 0.769231 NA Intergenic L1M5|LINE|L1 -311255 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 204.923-2 chr14 66547411 66547927 + 0.769231 NA intron (NM_001024218, intron 1 of 21) MIRc|SINE|MIR 40262 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 152.923-15 chr7 128760959 128761296 + 0.769231 NA intron (NM_001199673, intron 5 of 5) (TTCCCTT)n|Simple_repeat|Simple_repeat 14663 NM_001708 611 Hs.656404 NM_001708 ENSG00000128617 OPN1SW BCP|BOP|CBT opsin 1, short wave sensitive protein-coding 188.308-3 chr2 139138103 139138376 + 0.769231 NA Intergenic Intergenic 240915 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 192.615 chr17 74757243 74757580 + 0.769231 NA intron (NM_004252, intron 1 of 5) intron (NM_004252, intron 1 of 5) 8783 NM_004252 9368 Hs.724482 NM_004252 ENSG00000109062 SLC9A3R1 EBP50|NHERF|NHERF-1|NHERF1|NPHLOP2 SLC9A3 regulator 1 protein-coding 237.692 chr14 71425432 71426011 + 0.769231 NA intron (NM_015556, intron 4 of 26) L1MB3|LINE|L1 -13218 NM_001284247 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 153.231-14 chr3 138364185 138364655 + 0.769231 NA intron (NM_001252090, intron 1 of 5) MIR|SINE|MIR 15200 NM_001252090 22808 Hs.527021 NM_012219 ENSG00000158186 MRAS M-RAs|R-RAS3|RRAS3 muscle RAS oncogene homolog protein-coding 174.923-11 chr6 69196747 69197103 + 0.769231 NA intron (NM_001704, intron 17 of 31) MIRb|SINE|MIR 561643 NM_001704 577 Hs.13261 NM_001704 ENSG00000135298 ADGRB3 BAI3 adhesion G protein-coupled receptor B3 protein-coding 169.385-3 chr20 35957400 35957825 + 0.769231 NA Intergenic Intergenic -2253 NM_016558 51282 Hs.584909 NM_016558 ENSG00000171222 SCAND1 RAZ1|SDP1 SCAN domain containing 1 protein-coding 169.615-7 chr4 95763247 95763537 + 0.769231 NA Intergenic L1MA3|LINE|L1 -76701 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding 153.615 chr10 109931068 109931374 + 0.769231 NA Intergenic Intergenic -7668 NM_001167604 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 221.462 chr3 89823731 89824178 + 0.769231 NA Intergenic Intergenic 716333 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 166.769-4 chr11 90520637 90520966 + 0.769231 NA intron (NR_104190, intron 1 of 6) L1MEf|LINE|L1 35056 NR_039711 100616186 NR_039711 ENSG00000266703 MIR4490 - microRNA 4490 ncRNA 169.538-3 chr16 59673989 59674326 + 0.769231 NA Intergenic MER1A|DNA|hAT-Charlie 81034 NR_028471 644649 Hs.250392 NR_028471 APOOP5 - apolipoprotein O pseudogene 5 pseudo 266.538-2 chr8 140967968 140968446 + 0.769231 NA intron (NM_001352719, intron 1 of 32) intron (NM_001352719, intron 1 of 32) 32797 NM_001352710 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding 178.539 chr13 108026340 108026602 + 0.769231 NA Intergenic Arthur1A|DNA|hAT-Tip100 -158975 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding 176.231-3 chr2 181050685 181050999 + 0.769231 NA intron (NM_001278555, intron 3 of 5) intron (NM_001278555, intron 3 of 5) 69718 NM_001278554 10477 Hs.470804 NM_006357 ENSG00000170035 UBE2E3 UBCH9|UbcM2 ubiquitin conjugating enzyme E2 E3 protein-coding 170.615-3 chr5 87720863 87721104 + 0.769231 NA Intergenic HUERS-P1-int|LTR|ERV1 58941 NR_149089 111082994 Hs.544037 NR_149089 LINC02488 CTD-2316B1 long intergenic non-protein coding RNA 2488 ncRNA 204.923-6 chr6 169015087 169015465 + 0.769231 NA Intergenic L1PA15|LINE|L1 20367 NR_134622 101929460 Hs.355225 NR_134622 ENSG00000229720 LOC101929460 - uncharacterized LOC101929460 ncRNA 162.692-3 chr14 71681798 71682061 + 0.769231 NA intron (NM_001354286, intron 13 of 24) intron (NM_001354286, intron 13 of 24) 95631 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 233.231 chr13 94512485 94513080 + 0.769231 NA intron (NM_001322186, intron 1 of 9) intron (NM_001322186, intron 1 of 9) -33100 NM_001922 1638 Hs.301865 NM_001922 ENSG00000080166 DCT TRP-2|TYRP2 dopachrome tautomerase protein-coding 239.615 chr5 18563241 18563665 + 0.769231 NA Intergenic Intergenic 756179 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 170.308-9 chr8 137033998 137034393 + 0.769231 NA Intergenic MIRc|SINE|MIR 379393 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 220.462 chr14 50869220 50869628 + 0.769231 NA Intergenic Intergenic -2629 NM_001206673 145447 Hs.271896 NM_181533 ENSG00000131969 ABHD12B BEM46L3|C14orf29|c14_5314 abhydrolase domain containing 12B protein-coding 209.231-2 chr16 70552558 70552910 + 0.769231 NA intron (NM_012426, intron 11 of 25) MER112|DNA|hAT-Charlie 14729 NR_003079 692214 NR_003079 ENSG00000221066 SNORD111 HBII-82 small nucleolar RNA, C/D box 111 snoRNA 170.385-3 chr22 26198428 26198773 + 0.769231 NA intron (NM_001184776, intron 1 of 14) MLT1A1|LTR|ERVL-MaLR 29126 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding 158.077-7 chr5 24858264 24858661 + 0.769231 NA Intergenic Intergenic -17879 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA 191.923 chr6 167961998 167962308 + 0.769231 NA intron (NM_001040000, intron 29 of 29) intron (NM_001040000, intron 29 of 29) 14786 NM_001129895 100128124 Hs.448059 NM_001129895 HGC6.3 - uncharacterized LOC100128124 protein-coding 180-4 chr2 199793628 199794082 + 0.769231 NA intron (NM_001350855, intron 3 of 3) intron (NM_001350855, intron 3 of 3) 57318 NM_001350853 348751 Hs.734578 NM_001350853 ENSG00000226124 FTCDNL1 FONG formiminotransferase cyclodeaminase N-terminal like protein-coding 216.231-2 chr8 112622203 112622745 + 0.769231 NA intron (NM_001363185, intron 20 of 66) intron (NM_001363185, intron 20 of 66) -21019 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 159.539-2 chr2 207396721 207396974 + 0.769231 NA Intergenic Intergenic -127423 NR_031633 100302130 NR_031633 ENSG00000221628 MIR1302-4 MIRN1302-4|hsa-mir-1302-4 microRNA 1302-4 ncRNA 290 chr8 107471646 107472209 + 0.769231 NA intron (NM_001199859, intron 1 of 8) L1MC3|LINE|L1 25991 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding 178.385-11 chr4 164723833 164724087 + 0.769231 NA Intergenic Intergenic -30171 NM_001352885 100505989 Hs.328236 NM_001352885 ENSG00000248771 SMIM31 LINC01207 small integral membrane protein 31 protein-coding 213.308-6 chr5 44438129 44438571 + 0.769231 NA Intergenic Intergenic -48930 NM_004465 2255 Hs.248049 NM_004465 ENSG00000070193 FGF10 - fibroblast growth factor 10 protein-coding 218.385-2 chr2 129878321 129878674 + 0.769231 NA Intergenic Intergenic -1006 NR_149127 105373615 NR_149127 LINC02572 - long intergenic non-protein coding RNA 2572 ncRNA 170-5 chr4 86797872 86798130 + 0.769231 NA intron (NM_080685, intron 41 of 47) HSMAR2|DNA|TcMar-Mariner 51383 NM_197965 345274 Hs.452996 NM_197965 ENSG00000145283 SLC10A6 SOAT solute carrier family 10 member 6 protein-coding 156.692-4 chr11 77679053 77679274 + 0.769231 NA intron (NM_016578, intron 11 of 15) MER58B|DNA|hAT-Charlie -41357 NM_001311199 1207 Hs.430733 NM_001293 ENSG00000074201 CLNS1A CLCI|CLNS1B|ICln chloride nucleotide-sensitive channel 1A protein-coding 178.385-10 chr3 122346115 122346436 + 0.769231 NA Intergenic AluJb|SINE|Alu 21027 NM_005213 1475 Hs.518198 NM_005213 ENSG00000121552 CSTA AREI|PSS4|STF1|STFA cystatin A protein-coding 191.154 chr10 51107026 51107594 + 0.769231 NA intron (NM_006258, intron 1 of 17) L2a|LINE|L2 32823 NM_006258 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding 193.846-5 chr7 14803364 14803769 + 0.769231 NA intron (NM_001350717, intron 2 of 24) intron (NM_001350717, intron 2 of 24) 37884 NM_145695 1607 Hs.567255 NM_004080 ENSG00000136267 DGKB DAGK2|DGK|DGK-BETA diacylglycerol kinase beta protein-coding 179.077-8 chr20 55523577 55523846 + 0.769231 NA Intergenic L1PA16|LINE|L1 -96514 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA 228.923-2 chr4 34945534 34945967 + 0.769231 NA Intergenic L2c|LINE|L2 -676003 NR_147183 105374394 Hs.570782 NR_147183 ENSG00000248685 LINC02484 - long intergenic non-protein coding RNA 2484 ncRNA 156.615-2 chr13 87965781 87966167 + 0.769231 NA Intergenic Intergenic -155454 NR_104059 101930749 Hs.539610 NR_104059 ENSG00000223404 LINC00397 - long intergenic non-protein coding RNA 397 ncRNA 170.769-6 chr14 73717254 73717681 + 0.769231 NA 3' UTR (NM_194278, exon 12 of 12) 3' UTR (NM_194278, exon 12 of 12) -3083 NM_006029 9240 Hs.194709 NM_006029 ENSG00000176903 PNMA1 MA1 PNMA family member 1 protein-coding 217.077-3 chr2 19488245 19488720 + 0.769231 NA Intergenic Intergenic -129859 NM_145260 130497 Hs.123933 NM_145260 ENSG00000143867 OSR1 ODD odd-skipped related transcription factor 1 protein-coding 178.231-3 chr21 18493538 18494028 + 0.769231 NA Intergenic Intergenic -89998 NM_002772 5651 Hs.149473 NM_002772 ENSG00000154646 TMPRSS15 ENTK|PRSS7 transmembrane serine protease 15 protein-coding 194-4 chr5 105309347 105309771 + 0.769231 NA Intergenic Intergenic 210085 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 158.154-4 chr5 12649128 12649527 + 0.769231 NA intron (NR_033383, intron 2 of 3) intron (NR_033383, intron 2 of 3) -18532 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 161.077-14 chr8 71087559 71087943 + 0.769231 NA Intergenic Intergenic 268955 NM_172058 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding 173.846-2 chr10 36217283 36217582 + 0.769231 NA Intergenic L1MEd|LINE|L1 439130 NR_110138 102578074 NR_110138 ENSG00000280719 PCAT5 LINC01452|TPCAT-10-36067 prostate cancer associated transcript 5 ncRNA 159.615-7 chr6 22586292 22586572 + 0.769231 NA Intergenic Intergenic 16866 NM_138574 154150 Hs.629246 NM_138574 ENSG00000112273 HDGFL1 HRP-1|Hdgfrp1|PWWP1|dJ309H15.1 HDGF like 1 protein-coding 199.384 chr1 247803676 247804161 + 0.769231 NA Intergenic Intergenic 11811 NM_001001966 284532 Hs.626620 NM_001001966 ENSG00000196772 OR14A16 OR5AT1 olfactory receptor family 14 subfamily A member 16 protein-coding 164.154-6 chr7 141041129 141041405 + 0.769231 NA Intergenic Intergenic -26315 NM_053035 51650 Hs.416207 NM_016071 ENSG00000090263 MRPS33 CGI-139|MRP-S33|PTD003|S33mt mitochondrial ribosomal protein S33 protein-coding 199.692-2 chr14 45654234 45654700 + 0.769231 NA Intergenic Intergenic 61135 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 188.154-4 chr4 25799977 25800357 + 0.769231 NA intron (NM_001297592, intron 11 of 23) intron (NM_001297592, intron 11 of 23) 62821 NM_015187 23231 Hs.479384 NM_015187 ENSG00000091490 SEL1L3 Sel-1L3 SEL1L family member 3 protein-coding 160.615-5 chr14 37641203 37641447 + 0.769231 NA intron (NM_001310135, intron 3 of 32) intron (NM_001310135, intron 3 of 32) 45696 NM_001310135 319089 Hs.659936 NM_001007795 ENSG00000139865 TTC6 C14orf25|NCRNA00291 tetratricopeptide repeat domain 6 protein-coding 174.461 chr11 40749626 40749999 + 0.769231 NA intron (NM_020929, intron 1 of 4) L1MA4A|LINE|L1 -456682 NR_047674 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 161.769-8 chr7 76352008 76352268 + 0.769231 NA intron (NM_012479, intron 1 of 1) intron (NM_012479, intron 1 of 1) 6853 NM_012479 7532 Hs.744840 NM_012479 ENSG00000170027 YWHAG 14-3-3GAMMA|EIEE56|PPP1R170 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma protein-coding 156.769-2 chr11 66473264 66473541 + 0.769231 NA TTS (NR_120586) TTS (NR_120586) 6497 NM_145065 246330 Hs.656875 NM_145065 ENSG00000174516 PELI3 - pellino E3 ubiquitin protein ligase family member 3 protein-coding 163.231-2 chr12 30413711 30414065 + 0.769231 NA Intergenic Intergenic 263356 NM_001190995 10526 Hs.505136 NM_006390 ENSG00000133704 IPO8 RANBP8 importin 8 protein-coding 181.154-3 chr2 43882554 43882804 + 0.769231 NA 3' UTR (NM_022437, exon 13 of 13) 3' UTR (NM_022437, exon 13 of 13) 43708 NM_001357321 64241 Hs.413931 NM_022437 ENSG00000143921 ABCG8 GBD4|STSL ATP binding cassette subfamily G member 8 protein-coding 165.385-5 chr2 41826853 41827158 + 0.769231 NA Intergenic L2c|LINE|L2 -50550 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 176.308-8 chr5 38147169 38147610 + 0.769231 NA intron (NR_147009, intron 2 of 2) intron (NR_147009, intron 2 of 2) -1091 NR_134272 101929745 Hs.374715 NR_134272 ENSG00000248461 LINC02119 - long intergenic non-protein coding RNA 2119 ncRNA 244.462 chr4 168764882 168765264 + 0.769231 NA intron (NM_001166108, intron 10 of 21) MIRb|SINE|MIR -67022 NM_001367568 23022 Hs.151220 NM_016081 ENSG00000129116 PALLD CGI-151|CGI151|MYN|PNCA1|SIH002 palladin, cytoskeletal associated protein protein-coding 223.923-2 chr17 59765537 59766059 + 0.769231 NA intron (NM_001329400, intron 4 of 9) Tigger2|DNA|TcMar-Tigger 58144 NM_001329402 81671 Hs.444569 NM_030938 ENSG00000062716 VMP1 EPG3|TANGO5|TMEM49 vacuole membrane protein 1 protein-coding 194.154-10 chr8 122972393 122972748 + 0.769231 NA intron (NM_001362797, intron 4 of 4) MIR|SINE|MIR 53202 NM_001363963 79139 Hs.241576 NM_024295 ENSG00000136986 DERL1 DER-1|DER1|derlin-1 derlin 1 protein-coding 167.538-5 chr2 31832344 31832761 + 0.769231 NA Intergenic Intergenic -28572 NR_146994 105374449 Hs.580386 NR_146994 ENSG00000223647 LINC01946 - long intergenic non-protein coding RNA 1946 ncRNA 155.077-10 chr18 5811285 5811777 + 0.769231 NA Intergenic Intergenic -29164 NR_039772 100616244 NR_039772 ENSG00000272380 MIR3976 - microRNA 3976 ncRNA 222.384 chr11 110226364 110226933 + 0.769231 NA intron (NM_001260493, intron 14 of 15) L1MB3|LINE|L1 70064 NM_001260495 5962 Hs.263671 NM_002906 ENSG00000137710 RDX DFNB24 radixin protein-coding 208 chr11 12471328 12471671 + 0.769231 NA intron (NM_018222, intron 1 of 12) L1PA13|LINE|L1 93928 NM_018222 55742 Hs.432914 NM_018222 ENSG00000197702 PARVA CH-ILKBP|MXRA2 parvin alpha protein-coding 206.462-2 chr16 49722012 49722468 + 0.769231 NA intron (NM_001271620, intron 3 of 7) intron (NM_001271620, intron 3 of 7) -57916 NM_001330533 23090 Hs.443715 NM_015069 ENSG00000102935 ZNF423 Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ zinc finger protein 423 protein-coding 161.538-10 chr3 27317790 27318315 + 0.769231 NA intron (NM_152534, intron 7 of 38) AluY|SINE|Alu 51331 NM_199347 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 185.231-9 chr8 134228304 134228695 + 0.769231 NA Intergenic Intergenic 342003 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 196.538 chr14 88030968 88031257 + 0.769231 NA intron (NR_046094, intron 2 of 3) ERVL-E-int|LTR|ERVL -4800 NR_110121 101928791 Hs.641889 NR_110121 ENSG00000258826 LINC01147 - long intergenic non-protein coding RNA 1147 ncRNA 225.538-3 chr4 112469377 112469905 + 0.769231 NA Intergenic L1MD|LINE|L1 -45738 NR_161159 105377372 NR_161159 LOC105377372 - uncharacterized LOC105377372 ncRNA 152-5 chr2 57243168 57243432 + 0.769231 NA Intergenic Intergenic -664351 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 171.923-2 chr12 15247958 15248534 + 0.769231 NA Intergenic L1MA4|LINE|L1 -26829 NM_032918 85004 Hs.199487 NM_032918 ENSG00000134533 RERG - RAS like estrogen regulated growth inhibitor protein-coding 203.846-4 chr9 91355617 91355991 + 0.769231 NA intron (NM_001698, intron 3 of 9) intron (NM_001698, intron 3 of 9) 6120 NM_001698 549 Hs.175905 NM_001698 ENSG00000148090 AUH - AU RNA binding methylglutaconyl-CoA hydratase protein-coding 225.385-2 chr2 104849558 104850017 + 0.769231 NA intron (NR_037883, intron 1 of 3) intron (NR_037883, intron 1 of 3) 1689 NR_131235 100506421 Hs.437281 NR_037883 ENSG00000233639 PANTR1 LINC01158|linc-Brn1a|linc-POU3F3 POU3F3 adjacent non-coding transcript 1 ncRNA 229.846-2 chr8 83894307 83895017 + 0.769231 NA Intergenic Intergenic -288125 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 178.077-7 chr5 130790690 130791074 + 0.769231 NA Intergenic L1MA1|LINE|L1 374374 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding 189.461-2 chr9 28966515 28967068 + 0.769231 NA intron (NM_001354574, intron 1 of 5) intron (NM_001354574, intron 1 of 5) -77836 NR_030618 100126316 NR_030618 ENSG00000215939 MIR873 MIRN873|hsa-mir-873|mir-873 microRNA 873 ncRNA 209.615-3 chr5 94024931 94025449 + 0.769231 NA intron (NR_028080, intron 3 of 8) MLT1A|LTR|ERVL-MaLR 86473 NM_032042 83989 Hs.600086 NM_032042 ENSG00000113391 FAM172A C5orf21|Toupee family with sequence similarity 172 member A protein-coding 162.769-6 chr5 91966417 91966825 + 0.769231 NA Intergenic Intergenic -583304 NM_020801 57561 Hs.24684 NM_020801 ENSG00000113369 ARRDC3 TLIMP arrestin domain containing 3 protein-coding 166.615-2 chr14 55046789 55047121 + 0.769231 NA 3' UTR (NM_080867, exon 2 of 2) 3' UTR (NM_080867, exon 2 of 2) -4692 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding 215.846 chr1 66273462 66274029 + 0.769231 NA intron (NM_001037340, intron 5 of 14) L2b|LINE|L2 -58363 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding 167.692-3 chr18 13028123 13028355 + 0.769231 NA intron (NM_032142, intron 9 of 44) MLT1C|LTR|ERVL-MaLR 36877 NM_032142 55125 Hs.100914 NM_018069 ENSG00000101639 CEP192 PPP1R62 centrosomal protein 192 protein-coding 154.308-3 chr10 16901996 16902277 + 0.769231 NA intron (NM_001081, intron 51 of 66) (AT)n|Simple_repeat|Simple_repeat -84682 NM_152724 6251 Hs.524161 NM_012425 ENSG00000148484 RSU1 RSP-1 Ras suppressor protein 1 protein-coding 151.923-9 chr9 99475036 99475400 + 0.769231 NA Intergenic L1ME4b|LINE|L1 -99961 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA 190.384 chr12 37666779 37667203 + 0.769231 NA Intergenic ALR/Alpha|Satellite|centr -649783 NM_001308340 144245 Hs.259305 NM_001013620 ENSG00000175548 ALG10B ALG10|KCR1 ALG10 alpha-1,2-glucosyltransferase B protein-coding 157.077-2 chr12 45045582 45045962 + 0.769231 NA intron (NM_001004329, intron 1 of 3) AluJb|SINE|Alu 5327 NM_001004329 440097 Hs.302764 NM_001004329 ENSG00000185610 DBX2 - developing brain homeobox 2 protein-coding 169.923-5 chr8 27185594 27186001 + 0.769231 NA Intergenic L1MC5a|LINE|L1 72607 NM_030795 81551 Hs.201058 NM_030795 ENSG00000015592 STMN4 RB3 stathmin 4 protein-coding 157.692-4 chr12 96426503 96426878 + 0.769231 NA Intergenic L1MB3|LINE|L1 -26251 NM_002595 5128 Hs.506415 NM_002595 ENSG00000059758 CDK17 PCTAIRE2|PCTK2 cyclin dependent kinase 17 protein-coding 163.846 chr1 150349291 150349597 + 0.769231 NA intron (NM_004698, intron 15 of 15) intron (NM_004698, intron 15 of 15) -14667 NM_001297673 23248 Hs.213666 NM_015203 ENSG00000163125 RPRD2 HSPC099|KIAA0460 regulation of nuclear pre-mRNA domain containing 2 protein-coding 194.615 chr11 88567999 88568437 + 0.769231 NA intron (NM_001143831, intron 6 of 8) L2a|LINE|L2 63642 NR_049724 100873989 Hs.616625 NR_049724 ENSG00000255082 GRM5-AS1 - GRM5 antisense RNA 1 ncRNA 199.923 chr14 33408568 33409269 + 0.769231 NA intron (NM_001165893, intron 3 of 10) intron (NM_001165893, intron 3 of 10) -300019 NR_132771 106635522 NR_132771 SNORA89 - small nucleolar RNA, H/ACA box 89 snoRNA 155.923-3 chr2 50119136 50119392 + 0.769231 NA intron (NM_001330093, intron 18 of 22) intron (NM_001330093, intron 18 of 22) -145061 NM_001320157 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 175 chr11 86438968 86439237 + 0.769231 NA Intergenic MLT2B4|LTR|ERVL 64215 NM_001156474 60494 Hs.144913 NM_021827 ENSG00000149201 CCDC81 - coiled-coil domain containing 81 protein-coding 160.616 chr4 136039190 136039471 + 0.769231 NA Intergenic Intergenic -125650 NR_103763 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA 162.923 chr14 60432907 60433323 + 0.769231 NA Intergenic Intergenic 52948 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 170-6 chr5 84839330 84839568 + 0.769231 NA Intergenic MIRb|SINE|MIR -454569 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 162-5 chr2 57498839 57499227 + 0.769231 NA Intergenic MIR|SINE|MIR -408618 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 185.539 chr3 71286604 71286895 + 0.769231 NA intron (NR_146142, intron 5 of 19) intron (NR_146142, intron 5 of 19) -3009 NR_126463 104502416 Hs.658538 NR_126463 ENSG00000244203 FOXP1-AS1 - FOXP1 antisense RNA 1 ncRNA 159.923-9 chr7 52999738 53000101 + 0.769231 NA Intergenic Intergenic -35714 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 161.846-9 chr8 87350756 87351239 + 0.769231 NA intron (NM_173538, intron 8 of 10) intron (NM_173538, intron 8 of 10) 484582 NM_173538 168975 Hs.246284 NM_173538 ENSG00000176571 CNBD1 - cyclic nucleotide binding domain containing 1 protein-coding 153.231-6 chr17 61085617 61085843 + 0.769231 NA intron (NM_001330413, intron 23 of 25) intron (NM_001330413, intron 23 of 25) 281974 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 226 chr13 92812427 92813004 + 0.769231 NA intron (NM_004466, intron 7 of 7) L1MB4|LINE|L1 -91101 NR_046520 100873969 Hs.577863 NR_046520 ENSG00000235984 GPC5-AS1 - GPC5 antisense RNA 1 ncRNA 221.846 chr2 118422170 118422612 + 0.769231 NA Intergenic L1MB8|LINE|L1 180575 NR_110272 101927709 Hs.274529 NR_110272 LOC101927709 - uncharacterized LOC101927709 ncRNA 209.077-2 chr2 121663873 121664314 + 0.769231 NA intron (NR_037857, intron 2 of 3) intron (NR_037857, intron 2 of 3) 14104 NR_037856 254128 Hs.712685 NR_037856 ENSG00000236859 NIFK-AS1 - NIFK antisense RNA 1 ncRNA 193.308 chr6 147375270 147375617 + 0.769231 NA intron (NM_139244, intron 24 of 25) L1MEg|LINE|L1 -133247 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 188.385 chr7 68653245 68653743 + 0.769231 NA Intergenic Tigger3|DNA|TcMar-Tigger 633241 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA 218.462-5 chr9 22721607 22722092 + 0.769231 NA intron (NR_038977, intron 3 of 5) intron (NR_038977, intron 3 of 5) 75649 NR_038977 441389 NR_038977 ENSG00000234840 LINC01239 - long intergenic non-protein coding RNA 1239 ncRNA 185.769 chr1 150841537 150841898 + 0.769231 NA intron (NM_001197325, intron 4 of 20) intron (NM_001197325, intron 4 of 20) -33457 NM_000396 1513 Hs.632466 NM_000396 ENSG00000143387 CTSK CTS02|CTSO|CTSO1|CTSO2|PKND|PYCD cathepsin K protein-coding 222.308-2 chr4 160684886 160685392 + 0.769231 NA Intergenic L1ME3A|LINE|L1 -907355 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA 173.923-6 chr9 106269667 106270100 + 0.769231 NA Intergenic Intergenic -331045 NR_107048 102465995 NR_107048 ENSG00000277889 MIR8081 hsa-mir-8081 microRNA 8081 ncRNA 199.846-4 chr2 106354484 106355090 + 0.769231 NA Intergenic L1MEg|LINE|L1 -14958 NR_157576 402096 NR_157576 LOC402096 - anaphase promoting complex subunit 1 pseudogene pseudo 171.077-8 chr7 32148026 32148355 + 0.769231 NA intron (NM_001322059, intron 3 of 17) intron (NM_001322059, intron 3 of 17) -76754 NM_001322057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 208.154-4 chr5 32854026 32854556 + 0.769231 NA Intergenic HAL1|LINE|L1 -93152 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 169.154-4 chr11 78367664 78368206 + 0.769231 NA intron (NM_080491, intron 1 of 9) AluYk3|SINE|Alu -26055 NM_012296 9846 Hs.429434 NM_012296 ENSG00000033327 GAB2 - GRB2 associated binding protein 2 protein-coding 160.615-2 chr10 56322160 56322644 + 0.769231 NA Intergenic L2a|LINE|L2 38857 NM_007057 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 155.077-5 chr11 104750447 104750852 + 0.769231 NA Intergenic Intergenic -141347 NR_120585 102723895 Hs.48803 NR_120585 ENSG00000256422 LINC02552 - long intergenic non-protein coding RNA 2552 ncRNA 169.615-6 chr3 28334375 28334854 + 0.769231 NA intron (NM_022461, intron 5 of 7) intron (NM_022461, intron 5 of 7) -14107 NM_001040432 152098 Hs.510635 NM_001040432 ENSG00000206559 ZCWPW2 ZCW2 zinc finger CW-type and PWWP domain containing 2 protein-coding 177.692 chr1 79911167 79911517 + 0.769231 NA Intergenic Intergenic -624413 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 155.385-9 chr3 7372467 7372723 + 0.769231 NA intron (NM_000844, intron 4 of 9) intron (NM_000844, intron 4 of 9) 162689 NR_046606 100873937 Hs.570608 NR_046606 ENSG00000236202 GRM7-AS1 - GRM7 antisense RNA 1 ncRNA 180.385-3 chr21 27372387 27372728 + 0.769231 NA Intergenic MIRc|SINE|MIR -349822 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 167.615-2 chr2 95138136 95138481 + 0.769231 NA Intergenic MSTA-int|LTR|ERVL-MaLR -16281 NR_136153 64969 Hs.655259 NM_031902 ENSG00000144029 MRPS5 MRP-S5|S5mt mitochondrial ribosomal protein S5 protein-coding 225.923-3 chr16 68657921 68658414 + 0.769231 NA intron (NM_001793, intron 2 of 15) FLAM_C|SINE|Alu 12857 NM_001317195 1001 Hs.191842 NM_001793 ENSG00000062038 CDH3 CDHP|HJMD|PCAD cadherin 3 protein-coding 152.308-3 chr13 38575245 38575593 + 0.769231 NA intron (NR_046999, intron 1 of 3) intron (NR_046999, intron 1 of 3) 7695 NR_046999 100874147 Hs.555371 NR_046999 LINC00366 - long intergenic non-protein coding RNA 366 ncRNA 270.923 chr4 63357589 63358015 + 0.769231 NA Intergenic Intergenic 1051648 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 172.615-4 chr2 16697522 16697782 + 0.769231 NA Intergenic L1PB3|LINE|L1 -31818 NM_030797 81553 Hs.467769 NM_030797 ENSG00000197872 FAM49A - family with sequence similarity 49 member A protein-coding 152.692-2 chr16 47962677 47962966 + 0.769231 NA Intergenic Intergenic -2868 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA 160-3 chr11 34451056 34451353 + 0.769231 NA intron (NM_001752, intron 3 of 12) intron (NM_001752, intron 3 of 12) 12270 NM_001752 847 Hs.502302 NM_001752 ENSG00000121691 CAT - catalase protein-coding 161.231-9 chr5 44459671 44460090 + 0.769231 NA Intergenic MER91C|DNA|hAT-Tip100 50402 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA 160.615-17 chrX 50747719 50747999 + 0.769231 NA intron (NR_027121, intron 1 of 9) MIRb|SINE|MIR 66185 NM_020717 57477 Hs.420541 NM_020717 ENSG00000158352 SHROOM4 SHAP|shrm4 shroom family member 4 protein-coding 183.769 chr4 134008600 134008981 + 0.769231 NA Intergenic L1ME4c|LINE|L1 192999 NM_001363585 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding 165.769-10 chr22 28645982 28646291 + 0.769231 NA intron (NM_001145418, intron 1 of 22) L1P4|LINE|L1 33729 NM_001145418 23331 Hs.387856 NM_015281 ENSG00000100154 TTC28 TPRBK tetratricopeptide repeat domain 28 protein-coding 213.077-2 chr18 72735358 72735878 + 0.769231 NA Intergenic L1MEf|LINE|L1 117764 NR_049858 100847083 NR_049858 ENSG00000263750 MIR548AV - microRNA 548av ncRNA 168.923-2 chr15 61865506 61865802 + 0.769231 NA 3' UTR (NM_018080, exon 80 of 80) 3' UTR (NM_018080, exon 80 of 80) 135736 NR_146448 100506530 Hs.42265 NR_146448 ENSG00000259284 LINC02349 - long intergenic non-protein coding RNA 2349 ncRNA 160.231-4 chr6 117768398 117768767 + 0.769231 NA Intergenic Intergenic 93113 NM_138459 116150 Hs.289008 NM_138459 ENSG00000153989 NUS1 C6orf68|CDG1AA|MGC:7199|MRD55|NgBR|TANGO14 NUS1 dehydrodolichyl diphosphate synthase subunit protein-coding 170-3 chr4 42182223 42182497 + 0.769231 NA Intergenic Intergenic -29705 NM_001159547 389206 Hs.120591 NM_207406 ENSG00000188848 BEND4 CCDC4 BEN domain containing 4 protein-coding 220.769-3 chrX 52332481 52333068 + 0.769231 NA Intergenic L1MC1|LINE|L1 3868 NR_107055 102466880 NR_107055 ENSG00000275335 MIR8088 hsa-mir-8088 microRNA 8088 ncRNA 163.231-3 chr14 55603450 55603764 + 0.769231 NA intron (NR_073129, intron 2 of 45) L2a|LINE|L2 23400 NM_001079522 3895 Hs.509414 NM_004986 ENSG00000126777 KTN1 CG1|KNT|MU-RMS-40.19 kinectin 1 protein-coding 276.769 chr14 68208820 68209524 + 0.769231 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 385580 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 181.539 chr18 5932313 5932708 + 0.769231 NA Intergenic Intergenic -36556 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding 206.539 chrX 47984680 47985041 + 0.769231 NA intron (NM_001007088, intron 3 of 5) L1ME1|LINE|L1 19129 NM_001007088 7569 Hs.189690 NM_006962 ENSG00000147118 ZNF182 HHZ150|KOX14|ZNF21|Zfp182 zinc finger protein 182 protein-coding 173.077-5 chr6 37083643 37084101 + 0.769231 NA Intergenic L4_B_Mam|LINE|RTE-X 78217 NM_173558 221472 Hs.509664 NM_173558 ENSG00000146192 FGD2 ZFYVE4 FYVE, RhoGEF and PH domain containing 2 protein-coding 164.538-11 chr9 134640143 134640554 + 0.769231 NA Intergenic Intergenic -1457 NM_001278074 1289 Hs.210283 NM_000093 ENSG00000130635 COL5A1 EDSC|EDSCL1 collagen type V alpha 1 chain protein-coding 159.769-2 chr10 128317942 128318379 + 0.769231 NA TTS (NR_120619) TTS (NR_120619) 32210 NR_120619 101927381 Hs.523342 NR_120619 ENSG00000280953 LINC01163 TCONS_00017722 long intergenic non-protein coding RNA 1163 ncRNA 170.308-4 chr14 59837411 59837815 + 0.769231 NA intron (NM_021136, intron 1 of 8) L1ME4a|LINE|L1 33163 NM_021136 6252 Hs.368626 NM_021136 ENSG00000139970 RTN1 NSP reticulon 1 protein-coding 185.077-3 chr15 90040682 90040962 + 0.769231 NA intron (NM_198526, intron 1 of 4) HAL1|LINE|L1 34067 NR_036135 100422841 NR_036135 ENSG00000265871 MIR3174 - microRNA 3174 ncRNA 184.231 chr18 333619 333881 + 0.769231 NA intron (NM_130386, intron 6 of 9) intron (NM_130386, intron 6 of 9) -65703 NM_005131 9984 Hs.712543 NM_005131 ENSG00000079134 THOC1 HPR1|P84|P84N5 THO complex 1 protein-coding 175.692-4 chr6 114820038 114820467 + 0.769231 NA Intergenic Intergenic -757375 NM_153612 222537 Hs.645477 NM_153612 ENSG00000249853 HS3ST5 3-OST-5|3OST5|HS3OST5|NBLA04021 heparan sulfate-glucosamine 3-sulfotransferase 5 protein-coding 158-7 chr9 104119156 104119589 + 0.769231 NA intron (NM_001042550, intron 15 of 24) intron (NM_001042550, intron 15 of 24) 24745 NM_001042550 10592 Hs.119023 NM_006444 ENSG00000136824 SMC2 CAP-E|CAPE|SMC-2|SMC2L1 structural maintenance of chromosomes 2 protein-coding 234.077 chr10 12933783 12934180 + 0.769231 NA intron (NM_001282658, intron 6 of 6) L1MCa|LINE|L1 67732 NM_031455 83643 Hs.498720 NM_031455 ENSG00000151468 CCDC3 - coiled-coil domain containing 3 protein-coding 161.462 chr12 29071881 29072317 + 0.769231 NA Intergenic Intergenic -77179 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 178.462-4 chr6 102414786 102415063 + 0.769231 NA Intergenic L1MD|LINE|L1 1015939 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 178.077-4 chr18 71426271 71426739 + 0.769231 NA Intergenic L1MC5a|LINE|L1 152451 NR_038326 100505776 Hs.202072 NR_038325 ENSG00000260676 LINC01541 UTAT39 long intergenic non-protein coding RNA 1541 ncRNA 180.769-4 chr4 178475392 178475837 + 0.769231 NA Intergenic L1MA9|LINE|L1 -567678 NR_108093 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA 267.692 chr22 21846086 21846807 + 0.769231 NA intron (NM_002745, intron 1 of 8) intron (NM_002745, intron 1 of 8) 21234 NM_138957 5594 Hs.431850 NM_002745 ENSG00000100030 MAPK1 ERK|ERK-2|ERK2|ERT1|MAPK2|P42MAPK|PRKM1|PRKM2|p38|p40|p41|p41mapk|p42-MAPK mitogen-activated protein kinase 1 protein-coding 228.846 chr11 82174977 82175408 + 0.769231 NA intron (NR_120571, intron 3 of 7) intron (NR_120571, intron 3 of 7) 228721 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA 162.231-7 chr5 13880489 13880878 + 0.769231 NA intron (NM_001369, intron 21 of 78) L1M3de|LINE|L1 63797 NM_001369 1767 Hs.212360 NM_001369 ENSG00000039139 DNAH5 CILD3|DNAHC5|HL1|KTGNR|PCD dynein axonemal heavy chain 5 protein-coding 164.769-7 chr5 76486120 76486454 + 0.769231 NA intron (NM_006633, intron 2 of 35) intron (NM_006633, intron 2 of 35) -61122 NM_001285460 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 162.769-8 chr8 89492928 89493300 + 0.769231 NA Intergenic Intergenic 264597 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 209.846-2 chr17 27398150 27398692 + 0.769231 NA Intergenic Intergenic -19584 NR_033892 440419 Hs.385755 NR_033892 ENSG00000266433 TBC1D3P5 - TBC1 domain family member 3 pseudogene 5 pseudo 164.231 chr1 45651992 45652241 + 0.769231 NA intron (NM_021639, intron 6 of 12) MER20|DNA|hAT-Charlie -5431 NR_026768 728963 Hs.675157 NR_026768 RPS15AP10 RPS15A_4_42 ribosomal protein S15a pseudogene 10 pseudo 153.539-2 chr13 64021844 64022141 + 0.769231 NA intron (NR_145420, intron 2 of 5) intron (NR_145420, intron 2 of 5) 54019 NR_145420 144766 Hs.719557 NR_145420 ENSG00000227674 LINC00355 - long intergenic non-protein coding RNA 355 ncRNA 160-8 chr8 111614367 111614609 + 0.769231 NA Intergenic Intergenic 237849 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA 187.692 chr10 33045336 33045700 + 0.769231 NA Intergenic LTR24|LTR|ERV1 71289 NR_160030 101929447 NR_160030 IATPR TCONS_00018476|linc-ITGB1 ITGB1 adjacent tumor promoting lncRNA ncRNA 163.692-3 chr14 67369146 67369395 + 0.769231 NA intron (NM_004094, intron 2 of 7) L1MEb|LINE|L1 8942 NM_004094 1965 Hs.151777 NM_004094 ENSG00000134001 EIF2S1 EIF-2|EIF-2A|EIF-2alpha|EIF2|EIF2A eukaryotic translation initiation factor 2 subunit alpha protein-coding 253.692 chr5 67815962 67816615 + 0.769231 NA Intergenic Intergenic 23075 NR_130779 101928858 Hs.334066 NR_130779 ENSG00000249364 LOC101928858 - uncharacterized LOC101928858 ncRNA 253.231 chr1 6537809 6538548 + 0.769231 NA intron (NM_024654, intron 6 of 11) L1MB4|LINE|L1 16335 NM_024654 79707 Hs.59425 NM_024654 ENSG00000162408 NOL9 Grc3|NET6 nucleolar protein 9 protein-coding 214.077-3 chr5 46234987 46235495 + 0.769231 NA Intergenic ALR/Alpha|Satellite|centr -538861 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 162.923-4 chr4 43155787 43156069 + 0.769231 NA Intergenic L1PA15|LINE|L1 262662 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 164.231-3 chr10 80678544 80678974 + 0.769231 NA Intergenic MER4CL34|LTR|ERV1 28962 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 275.846 chr3 17717731 17718276 + 0.769231 NA intron (NM_001349076, intron 1 of 22) intron (NM_001349076, intron 1 of 22) -17983 NM_001134381 9779 Hs.475629 NM_014744 ENSG00000131374 TBC1D5 - TBC1 domain family member 5 protein-coding 163.385-2 chr11 97750617 97751060 + 0.769231 NA Intergenic Intergenic 1242413 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 162.385-6 chr8 130740910 130741326 + 0.769231 NA Intergenic Intergenic -297444 NM_018482 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 162.385-5 chr7 35676307 35676711 + 0.769231 NA intron (NM_022373, intron 2 of 8) L1MC5a|LINE|L1 18626 NM_022373 64224 Hs.643051 NM_022373 ENSG00000122557 HERPUD2 - HERPUD family member 2 protein-coding 183.615-5 chr2 216594244 216594547 + 0.769231 NA intron (NR_110392, intron 3 of 3) intron (NR_110392, intron 3 of 3) 12543 NR_110392 101928232 Hs.694592 NR_110392 LINC01280 - long intergenic non-protein coding RNA 1280 ncRNA 206.923-3 chr6 72841854 72842341 + 0.769231 NA intron (NM_001160132, intron 1 of 13) intron (NM_001160132, intron 1 of 13) 125656 NR_036244 100423005 NR_036244 ENSG00000266180 MIR4282 - microRNA 4282 ncRNA 188-3 chr6 41634661 41634983 + 0.769231 NA Intergenic Intergenic -2196 NM_001300804 4188 Hs.520119 NM_005586 ENSG00000112559 MDFI I-MF|I-mfa MyoD family inhibitor protein-coding 177.077-2 chr15 96745951 96746181 + 0.769231 NA Intergenic Intergenic 35588 NR_102754 100652749 Hs.303588 NR_102753 ENSG00000259282 SPATA8-AS1 - SPATA8 antisense RNA 1 (head to head) ncRNA 168.923-8 chr8 77608606 77608911 + 0.769231 NA Intergenic Intergenic 158061 NR_125830 102724874 Hs.571511 NR_125830 LOC102724874 - uncharacterized LOC102724874 ncRNA 177.154-6 chr8 104174609 104175174 + 0.769231 NA intron (NM_001348498, intron 20 of 24) intron (NM_001348498, intron 20 of 24) -48444 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 170.769-13 chr6 161093434 161093849 + 0.769231 NA intron (NM_005922, intron 14 of 26) intron (NM_005922, intron 14 of 26) 68341 NR_024277 79992 Hs.664873 NM_024929 ENSG00000279355 AGPAT4-IT1 C6orf59|NCRNA00241 AGPAT4 intronic transcript 1 ncRNA 180.154-2 chr21 33673605 33674091 + 0.769231 NA intron (NM_001001132, intron 1 of 29) intron (NM_001001132, intron 1 of 29) 31347 NM_001331009 6453 Hs.90221 NM_003024 ENSG00000205726 ITSN1 ITSN|SH3D1A|SH3P17 intersectin 1 protein-coding 151.615-6 chr18 2955363 2955626 + 0.769231 NA intron (NM_014646, intron 2 of 19) MSTB|LTR|ERVL-MaLR -8871 NR_026659 727896 Hs.673126 NR_026659 LOC727896 - cysteine and histidine rich domain containing 1 pseudogene pseudo 207.538-3 chr2 13253752 13254139 + 0.769231 NA Intergenic Intergenic -246932 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 164.308-2 chr1 240187904 240188191 + 0.769231 NA intron (NM_001305424, intron 4 of 18) intron (NM_001305424, intron 4 of 18) 96164 NM_001348094 56776 Hs.24889 NM_020066 ENSG00000155816 FMN2 - formin 2 protein-coding 165.231-8 chr21 31956767 31957082 + 0.769231 NA intron (NM_014586, intron 4 of 10) intron (NM_014586, intron 4 of 10) 83904 NM_014586 30811 Hs.109437 NM_014586 ENSG00000142149 HUNK - hormonally up-regulated Neu-associated kinase protein-coding 184.154-10 chr8 133786922 133787248 + 0.769231 NA Intergenic L2a|LINE|L2 -9733 NR_125422 101927798 Hs.615036 NR_125422 ENSG00000253165 LOC101927798 - uncharacterized LOC101927798 ncRNA 256.923-2 chrX 11718648 11719215 + 0.769231 NA Intergenic Intergenic -39228 NM_078628 10943 Hs.655288 NM_006800 ENSG00000005302 MSL3 MSL3L1 MSL complex subunit 3 protein-coding 190.846 chr10 77530620 77531169 + 0.769231 NA intron (NM_001271519, intron 1 of 28) MER113A|DNA|hAT-Charlie 106914 NM_001322832 3778 Hs.144795 NM_002247 ENSG00000156113 KCNMA1 BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 potassium calcium-activated channel subfamily M alpha 1 protein-coding 168.077-6 chr3 135958465 135958824 + 0.769231 NA Intergenic L1M3f|LINE|L1 -7084 NM_002718 5523 Hs.518155 NM_002718 ENSG00000073711 PPP2R3A PPP2R3|PR130|PR72 protein phosphatase 2 regulatory subunit B''alpha protein-coding 238.154 chr8 128068372 128068940 + 0.769231 NA intron (NR_003367, intron 5 of 8) AluSc5|SINE|Alu 19504 NR_031612 100302175 NR_031612 ENSG00000221176 MIR1207 MIRN1207|hsa-mir-1207 microRNA 1207 ncRNA 183.615-3 chr10 91706869 91707420 + 0.769231 NA Intergenic L2a|LINE|L2 -74073 NM_005398 5507 Hs.303090 NM_005398 ENSG00000119938 PPP1R3C PPP1R5|PTG protein phosphatase 1 regulatory subunit 3C protein-coding 195.384 chr22 45671029 45671505 + 0.769231 NA promoter-TSS (NM_001167621) promoter-TSS (NM_001167621) -531 NM_001167621 25814 Hs.475125 NM_013236 ENSG00000130638 ATXN10 E46L|HUMEEP|SCA10 ataxin 10 protein-coding 214.154 chr8 92206107 92206459 + 0.769231 NA Intergenic MER41-int|LTR|ERV1 -102898 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 183.538-2 chr12 57586740 57587150 + 0.769231 NA TTS (NM_001354705) TTS (NM_001354705) -4247 NM_001146260 79837 Hs.745011 NM_024779 ENSG00000166908 PIP4K2C PIP5K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma protein-coding 202.538 chr1 55165058 55165399 + 0.769231 NA intron (NM_015306, intron 7 of 67) intron (NM_015306, intron 7 of 67) 50136 NM_015306 23358 Hs.477009 NM_015306 ENSG00000162402 USP24 - ubiquitin specific peptidase 24 protein-coding 256.923 chr18 69238636 69239308 + 0.769231 NA Intergenic L2c|LINE|L2 -161916 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding 154.385-5 chr17 63085124 63085353 + 0.769231 NA intron (NM_025185, intron 3 of 25) L1MCa|LINE|L1 119003 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 236 chr17 61657574 61658124 + 0.769231 NA Intergenic L1M4|LINE|L1 -66630 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 154.461 chr1 80534950 80535316 + 0.769231 NA promoter-TSS (NR_125941) promoter-TSS (NR_125941) -622 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 174.923-4 chr22 44257308 44257826 + 0.769231 NA intron (NM_001099294, intron 4 of 4) L1MC2|LINE|L1 55384 NM_001099294 85352 Hs.6829 NM_001099294 ENSG00000138944 SHISAL1 KIAA1644 shisa like 1 protein-coding 173.846-8 chr5 41472641 41473090 + 0.769231 NA intron (NM_001005473, intron 1 of 2) intron (NM_001005473, intron 1 of 2) 37736 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding 250.616 chr1 170621783 170622197 + 0.769231 NA Intergenic L1ME3Cz|LINE|L1 -42141 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding 176.154-5 chr2 61004440 61004830 + 0.769231 NA intron (NM_144709, intron 4 of 17) AluY|SINE|Alu 12577 NM_001322124 150962 Hs.368348 NM_144709 ENSG00000162927 PUS10 CCDC139|DOBI pseudouridine synthase 10 protein-coding 176.769-2 chr1 163300377 163300696 + 0.769231 NA intron (NM_001254748, intron 2 of 5) intron (NM_001254748, intron 2 of 5) 21255 NM_001254748 8490 Hs.24950 NM_003617 ENSG00000143248 RGS5 MST092|MST106|MST129|MSTP032|MSTP092|MSTP106|MSTP129 regulator of G protein signaling 5 protein-coding 222.077 chr3 98154091 98154457 + 0.769231 NA Intergenic Intergenic 4888 NM_001005514 403273 Hs.554714 NM_001005514 ENSG00000236032 OR5H14 - olfactory receptor family 5 subfamily H member 14 protein-coding 160.154-8 chr2 171659954 171660228 + 0.769231 NA Intergenic L1ME3D|LINE|L1 -27378 NM_001378 1781 Hs.546250 NM_001378 ENSG00000077380 DYNC1I2 DIC74|DNCI2|IC2 dynein cytoplasmic 1 intermediate chain 2 protein-coding 162.846-3 chr2 123873748 123874049 + 0.769231 NA Intergenic L2c|LINE|L2 151276 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 162.462-5 chr22 34904178 34904453 + 0.769231 NA intron (NR_138042, intron 1 of 4) intron (NR_138042, intron 1 of 4) 93601 NR_138042 101926957 Hs.722607 NR_138042 ISX-AS1 - ISX antisense RNA 1 ncRNA 208.462 chr20 45029537 45029837 + 0.769231 NA intron (NM_006282, intron 10 of 10) MER5A|DNA|hAT-Charlie 63175 NR_147975 6789 Hs.472838 NM_006282 ENSG00000101109 STK4 KRS2|MST1|YSK3 serine/threonine kinase 4 protein-coding 157.615-3 chr2 41636467 41636815 + 0.769231 NA Intergenic Intergenic -240914 NR_033996 388942 Hs.631883 NR_033996 ENSG00000214691 LINC01913 - long intergenic non-protein coding RNA 1913 ncRNA 195.308-2 chr5 8498665 8498953 + 0.769231 NA Intergenic L1M3c|LINE|L1 37884 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA 169.308-5 chr9 36088209 36088539 + 0.769231 NA intron (NM_021111, intron 9 of 20) intron (NM_021111, intron 9 of 20) -48162 NR_104637 152007 Hs.493819 NM_022343 ENSG00000122694 GLIPR2 C9orf19|GAPR-1|GAPR1 GLI pathogenesis related 2 protein-coding 153.923-5 chr18 6666704 6666905 + 0.769231 NA Intergenic Intergenic -62912 NM_001366230 79822 Hs.183114 NM_030672 ENSG00000088756 ARHGAP28 - Rho GTPase activating protein 28 protein-coding 267.846 chr20 54742967 54743929 + 0.769231 NA Intergenic Intergenic 267855 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 165.385-16 chr8 6154629 6154872 + 0.769231 NA Intergenic L2c|LINE|L2 251798 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA 197.769-5 chr18 69544450 69544807 + 0.769231 NA intron (NM_152721, intron 1 of 7) intron (NM_152721, intron 1 of 7) 74697 NR_134579 105372179 Hs.666269 NR_134579 ENSG00000264845 LOC105372179 - uncharacterized LOC105372179 ncRNA 207.154-2 chr2 77898533 77898921 + 0.769231 NA intron (NR_110288, intron 1 of 3) L1M5|LINE|L1 -17207 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA 166-8 chr8 88244370 88244687 + 0.769231 NA intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 82955 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 161.231-4 chr21 19949838 19950223 + 0.769231 NA Intergenic Intergenic -50275 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA 151.846-11 chr6 135508781 135509113 + 0.769231 NA intron (NR_152842, intron 2 of 5) L1M3|LINE|L1 11146 NR_026805 100131814 Hs.734007 NR_026805 ENSG00000231028 LINC00271 C6orf217|NCRNA00271 long intergenic non-protein coding RNA 271 ncRNA 170-8 chr6 70469403 70469686 + 0.769231 NA intron (NM_001351609, intron 5 of 23) intron (NM_001351609, intron 5 of 23) -55586 NR_147708 105377849 Hs.669000 NR_147708 ENSG00000224349 LOC105377849 - uncharacterized LOC105377849 ncRNA 224.923-2 chr2 228719079 228719424 + 0.769231 NA Intergenic Intergenic -107856 NR_151716 101928765 Hs.334040 NR_151716 ENSG00000232023 LINC01807 - long intergenic non-protein coding RNA 1807 ncRNA 190.154-9 chr7 7507617 7508196 + 0.769231 NA intron (NM_001037763, intron 9 of 34) L1ME4a|LINE|L1 27967 NM_001037763 340267 Hs.491104 NM_001037763 ENSG00000215018 COL28A1 COL28 collagen type XXVIII alpha 1 chain protein-coding 158.077-3 chr2 162217676 162218126 + 0.769231 NA intron (NM_004460, intron 9 of 25) intron (NM_004460, intron 9 of 25) 25544 NM_001291807 2191 Hs.654370 NM_004460 ENSG00000078098 FAP DPPIV|FAPA|FAPalpha|SIMP fibroblast activation protein alpha protein-coding 153.461-3 chr7 98206011 98206366 + 0.769231 NA 3' UTR (NM_014916, exon 14 of 14) 3' UTR (NM_014916, exon 14 of 14) -6066 NM_177455 168620 Hs.511979 NM_177455 ENSG00000180535 BHLHA15 BHLHB8|MIST1 basic helix-loop-helix family member a15 protein-coding 188.615-3 chr9 100609207 100609741 + 0.769231 NA Intergenic L2|LINE|L2 31395 NM_001018116 347273 Hs.99004 NM_001018116 ENSG00000170681 CAVIN4 MURC|cavin-4 caveolae associated protein 4 protein-coding 169.538-7 chr2 106900289 106900673 + 0.769231 NA Intergenic Intergenic -13372 NM_001142352 84620 Hs.98265 NM_032528 ENSG00000144057 ST6GAL2 SIAT2|ST6GalII ST6 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding 174.769-5 chr3 95626498 95626928 + 0.769231 NA Intergenic Intergenic 56480 NR_077228 100287639 Hs.591320 NR_077228 ENSG00000244681 MTHFD2P1 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1 pseudo 171.923 chr10 27704326 27704719 + 0.769231 NA intron (NM_001242702, intron 5 of 6) L1MC4a|LINE|L1 -40093 NR_121652 101929202 Hs.568843 NR_121652 MKX-AS1 - MKX antisense RNA 1 ncRNA 170.462-3 chr16 36062190 36062574 + 0.769231 NA Intergenic ALR/Alpha|Satellite|centr 315830 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA 198.846 chr10 63458674 63459321 + 0.769231 NA intron (NM_001322258, intron 1 of 24) AluJb|SINE|Alu -6232 NR_027182 84989 Hs.659950 NM_032903 ENSG00000272767 JMJD1C-AS1 - JMJD1C antisense RNA 1 ncRNA 153.846-9 chr7 52912054 52912301 + 0.769231 NA Intergenic LTR2752|LTR|ERV1 -123456 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 229 chr2 79885751 79886145 + 0.769231 NA intron (NM_001282598, intron 6 of 17) intron (NM_001282598, intron 6 of 17) -19365 NR_107047 102465877 NR_107047 ENSG00000276917 MIR8080 hsa-mir-8080 microRNA 8080 ncRNA 213.077 chr10 60253564 60254004 + 0.769231 NA intron (NM_001204403, intron 8 of 43) intron (NM_001204403, intron 8 of 43) -112768 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding 165.231-12 chr5 29936661 29937060 + 0.769231 NA Intergenic LTR49-int|LTR|ERV1 56300 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 219.615 chr1 48063482 48064021 + 0.769231 NA Intergenic Intergenic -66366 NM_001194986 388630 Hs.61504 NM_001194986 ENSG00000269113 TRABD2B TIKI2 TraB domain containing 2B protein-coding 163.231-4 chr2 193808495 193808748 + 0.769231 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -535648 NR_110222 101927406 Hs.385793 NR_110222 ENSG00000225539 LINC01821 - long intergenic non-protein coding RNA 1821 ncRNA 178.615-6 chr5 96315209 96315481 + 0.769231 NA intron (NR_130776, intron 2 of 4) intron (NR_130776, intron 2 of 4) 116814 NM_001177875 5122 Hs.78977 NM_000439 ENSG00000175426 PCSK1 BMIQ12|NEC1|PC1|PC3|SPC3 proprotein convertase subtilisin/kexin type 1 protein-coding 213.231-3 chr12 14028252 14028601 + 0.769231 NA Intergenic MER33|DNA|hAT-Charlie -48070 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding 170.462-5 chr4 97393323 97393702 + 0.769231 NA intron (NR_102713, intron 1 of 5) intron (NR_102713, intron 1 of 5) 26586 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA 169.077-7 chr8 125184521 125184848 + 0.769231 NA intron (NM_001349486, intron 5 of 7) intron (NM_001349486, intron 5 of 7) 92824 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding 156.538-5 chr4 37037593 37037884 + 0.769231 NA Intergenic MER102a|DNA|hAT-Charlie 35959 NR_134669 100508631 Hs.397553 NR_134669 ENSG00000261761 LINC02616 - long intergenic non-protein coding RNA 2616 ncRNA 201.461 chr11 84998040 84998671 + 0.769231 NA intron (NM_001351274, intron 5 of 26) THE1D|LTR|ERVL-MaLR -74934 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 227.538 chr3 83435931 83436458 + 0.769231 NA Intergenic Intergenic 1433381 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 194 chr13 47430532 47430926 + 0.769231 NA Intergenic L1MEc|LINE|L1 501893 NR_047492 100861549 Hs.660978 NR_047492 ENSG00000260388 LINC00562 - long intergenic non-protein coding RNA 562 ncRNA 203.077-7 chr8 37411706 37412160 + 0.769231 NA intron (NR_121620, intron 6 of 6) intron (NR_121620, intron 6 of 6) 81980 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA 245.385-2 chr4 30756991 30757575 + 0.769231 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 36914 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 228.154-2 chr8 88787083 88787542 + 0.769231 NA Intergenic Intergenic -459829 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 168.462-5 chr5 80823490 80823728 + 0.769231 NA intron (NM_002439, intron 20 of 23) MER5B|DNA|hAT-Charlie -136754 NM_006909 5924 Hs.162129 NM_006909 ENSG00000113319 RASGRF2 GRF2|RAS-GRF2 Ras protein specific guanine nucleotide releasing factor 2 protein-coding 250.154-2 chr4 115267218 115267595 + 0.769231 NA Intergenic Intergenic -153786 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding 171.692-6 chr5 17934897 17935274 + 0.769231 NA Intergenic L1MA4A|LINE|L1 127811 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 159.462-5 chr6 110123555 110123953 + 0.769231 NA intron (NM_001024935, intron 3 of 9) intron (NM_001024935, intron 3 of 9) 55916 NM_003931 8936 Hs.75850 NM_003931 ENSG00000112290 WASF1 SCAR1|WAVE|WAVE1 WASP family member 1 protein-coding 166.154-4 chr2 59290153 59290535 + 0.769231 NA Intergenic Intergenic 72636 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 192.769 chr18 53985893 53986357 + 0.769231 NA Intergenic Intergenic 236287 NR_002970 677819 Hs.655869 NR_002970 ENSG00000207233 SNORA37 ACA37 small nucleolar RNA, H/ACA box 37 snoRNA 162.077-5 chr2 51747859 51748177 + 0.769231 NA intron (NR_135237, intron 5 of 10) intron (NR_135237, intron 5 of 10) -622630 NR_135239 105374596 NR_135239 ENSG00000225444 LINC01867 - long intergenic non-protein coding RNA 1867 ncRNA 155.385-10 chr4 44207556 44207797 + 0.769231 NA intron (NM_198353, intron 1 of 1) intron (NM_198353, intron 1 of 1) 190614 NR_131958 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA 227.923-3 chr10 111373528 111374039 + 0.769231 NA Intergenic L2a|LINE|L2 259492 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 202.846-3 chr20 34479179 34479733 + 0.769231 NA intron (NM_001257137, intron 18 of 25) intron (NM_001257137, intron 18 of 25) 13131 NR_030374 693229 NR_030374 ENSG00000207997 MIR644A MIR644|MIRN644|hsa-mir-644|hsa-mir-644a microRNA 644a ncRNA 170-9 chr8 91091012 91091309 + 0.769231 NA Intergenic (TTTTG)n|Simple_repeat|Simple_repeat -11459 NM_001129890 100130742 Hs.733070 NM_001129890 ENSG00000214954 LRRC69 - leucine rich repeat containing 69 protein-coding 256.308 chr11 41675679 41676116 + 0.769231 NA Intergenic L2b|LINE|L2 -38671 NR_120584 102723644 Hs.564283 NR_120584 ENSG00000255171 LINC01499 - long intergenic non-protein coding RNA 1499 ncRNA 194.692-3 chr7 39423289 39423749 + 0.769231 NA intron (NM_001370959, intron 6 of 9) intron (NM_001370959, intron 6 of 9) -17173 NR_046711 100861520 Hs.571292 NR_046711 ENSG00000224122 POU6F2-AS1 - POU6F2 antisense RNA 1 ncRNA 176.154 chr10 10385128 10385497 + 0.769231 NA Intergenic Intergenic 77037 NR_120637 101928322 Hs.576789 NR_120637 ENSG00000270111 CELF2-DT - CELF2 divergent transript ncRNA 173.846-3 chr12 38895035 38895484 + 0.769231 NA intron (NM_153634, intron 1 of 19) intron (NM_153634, intron 1 of 19) 10332 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding 164.308-9 chr4 53598352 53598660 + 0.769231 NA intron (NR_046827, intron 1 of 1) AluJb|SINE|Alu 5550 NR_046827 100873955 Hs.351074 NR_046827 LNX1-AS2 - LNX1 antisense RNA 2 ncRNA 185.308-2 chr7 121070814 121071296 + 0.769231 NA intron (NM_001105533, intron 4 of 17) intron (NM_001105533, intron 4 of 17) 81664 NM_001105533 79974 Hs.189652 NM_024913 ENSG00000106034 CPED1 C7orf58 cadherin like and PC-esterase domain containing 1 protein-coding 151.615 chr1 81229868 81230299 + 0.769231 NA Intergenic Intergenic -76109 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding 215.846-2 chr3 168818595 168818943 + 0.769231 NA intron (NR_021485, intron 13 of 15) intron (NR_021485, intron 13 of 15) -83176 NR_109989 100507661 Hs.65918 NR_109989 ENSG00000242268 LINC02082 - long intergenic non-protein coding RNA 2082 ncRNA 183.154-5 chr8 76996153 76996525 + 0.769231 NA intron (NM_001172086, intron 2 of 4) MIR|SINE|MIR 3739 NM_000318 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 167.692 chr10 28399693 28400052 + 0.769231 NA Intergenic Intergenic 95941 NR_134496 105376468 Hs.522525 NR_134496 ENSG00000237128 LINC02652 - long intergenic non-protein coding RNA 2652 ncRNA 171.308-6 chr9 136783678 136783985 + 0.769231 NA Intergenic AluYk2|SINE|Alu -7513 NM_032928 85014 Hs.356744 NM_032928 ENSG00000244187 TMEM141 - transmembrane protein 141 protein-coding 250.385 chr18 68963458 68963808 + 0.769231 NA intron (NM_001093729, intron 8 of 9) intron (NM_001093729, intron 8 of 9) 165553 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding 152.692-10 chrX 40220643 40220901 + 0.769231 NA Intergenic MLT1C|LTR|ERVL-MaLR -42145 NR_110386 101927476 Hs.522607 NR_110386 ENSG00000236393 LOC101927476 - uncharacterized LOC101927476 ncRNA 176.308-5 chr2 218057482 218057908 + 0.769231 NA intron (NR_034176, intron 2 of 13) L1MB7|LINE|L1 3595 NR_002712 3580 Hs.647858 NR_002712 CXCR2P1 CXCR2P|IL8RBP C-X-C motif chemokine receptor 2 pseudogene 1 pseudo 162.615-5 chr3 172561746 172562068 + 0.769231 NA intron (NR_146714, intron 3 of 3) Tigger3b|DNA|TcMar-Tigger 33700 NR_146714 105374219 Hs.186269 NR_146714 ENSG00000223387 LINC02068 - long intergenic non-protein coding RNA 2068 ncRNA 236.385-2 chr16 81970671 81971068 + 0.769231 NA Intergenic L1MB1|LINE|L1 40601 NM_145168 93517 Hs.87779 NM_145168 ENSG00000184860 SDR42E1 HSPC105 short chain dehydrogenase/reductase family 42E, member 1 protein-coding 156.923-18 chr5 141051677 141051982 + 0.769231 NA exon (NM_013340, exon 1 of 1) exon (NM_013340, exon 1 of 1) 453 NM_013340 29930 Hs.278950 NM_013340 ENSG00000171815 PCDHB1 PCDH-BETA1 protocadherin beta 1 protein-coding 290.538-2 chr19 27785403 27786072 + 0.769231 NA Intergenic L1MC2|LINE|L1 -7694 NR_146733 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 166.077 chr1 112558124 112558676 + 0.769231 NA intron (NM_017744, intron 11 of 14) intron (NM_017744, intron 11 of 14) 49435 NM_024494 7482 Hs.258575 NM_004185 ENSG00000134245 WNT2B WNT13 Wnt family member 2B protein-coding 209.154-2 chr4 59267429 59267900 + 0.769231 NA Intergenic Tigger2|DNA|TcMar-Tigger 254091 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 160.615-3 chr11 84226761 84227257 + 0.769231 NA intron (NM_001142700, intron 1 of 19) AluSc5|SINE|Alu 46271 NM_001142700 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 163.615-5 chr3 163086368 163086687 + 0.769231 NA Intergenic Intergenic 216774 NR_033945 647107 Hs.408584 NR_033945 ENSG00000241369 LINC01192 CT64 long intergenic non-protein coding RNA 1192 ncRNA 153.077-8 chr6 143039841 143040211 + 0.769231 NA Intergenic Intergenic -2444 NR_038987 100507489 Hs.486645 NR_038987 LINC01277 - long intergenic non-protein coding RNA 1277 ncRNA 160.923-7 chr8 107315724 107316113 + 0.769231 NA intron (NM_001199859, intron 4 of 8) intron (NM_001199859, intron 4 of 8) 20597 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding 191.077-3 chr4 31292104 31292418 + 0.769231 NA Intergenic L1MA6|LINE|L1 121117 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 169.077-2 chr12 14338474 14338758 + 0.769231 NA Intergenic Intergenic -27016 NM_018179 55729 Hs.504856 NM_018179 ENSG00000171681 ATF7IP AM|ATF-IP|MCAF|MCAF1|p621 activating transcription factor 7 interacting protein protein-coding 181.231 chr14 43126145 43126616 + 0.769231 NA Intergenic Intergenic 1380903 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 157.231-11 chr8 40898070 40898337 + 0.769231 NA promoter-TSS (NM_001135731) promoter-TSS (NM_001135731) -377 NM_001135731 79698 Hs.591850 NM_024645 ENSG00000165061 ZMAT4 - zinc finger matrin-type 4 protein-coding 180.308-7 chr8 92679807 92680151 + 0.769231 NA Intergenic Intergenic -24485 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 152-11 chr7 4708505 4708786 + 0.769231 NA intron (NM_001037165, intron 1 of 8) intron (NM_001037165, intron 1 of 8) 26350 NM_001037165 221937 Hs.487393 NM_001037165 ENSG00000164916 FOXK1 FOXK1L forkhead box K1 protein-coding 265.615 chr21 17556810 17557290 + 0.769231 NA intron (NM_001207064, intron 3 of 3) intron (NM_001207064, intron 3 of 3) 44007 NM_001207063 1525 Hs.627078 NM_001338 ENSG00000154639 CXADR CAR|CAR4/6|HCAR CXADR Ig-like cell adhesion molecule protein-coding 232.308-2 chr9 34313049 34313486 + 0.769231 NA intron (NM_194313, intron 1 of 12) MLT1H1|LTR|ERVL-MaLR 16001 NM_194313 347240 Hs.710246 NM_194313 ENSG00000186638 KIF24 C9orf48|bA571F15.4 kinesin family member 24 protein-coding 174 chr1 115844667 115845233 + 0.769231 NA Intergenic Charlie7a|DNA|hAT-Charlie -3824 NM_005599 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding 157.308-8 chr6 74477122 74477448 + 0.769231 NA intron (NR_110856, intron 2 of 3) intron (NR_110856, intron 2 of 3) 407834 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 189.231-3 chr5 59359568 59359993 + 0.769231 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) -2810 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 186.154 chr10 101616911 101617283 + 0.769231 NA intron (NR_136613, intron 5 of 7) MIRb|SINE|MIR -15600 NR_036115 100423033 NR_036115 ENSG00000283558 MIR3158-2 mir-3158-2 microRNA 3158-2 ncRNA 152.692-6 chr5 126798516 126798740 + 0.769231 NA intron (NR_134488, intron 1 of 11) intron (NR_134488, intron 1 of 11) 21492 NM_001198557 4001 Hs.89497 NM_005573 ENSG00000113368 LMNB1 ADLD|LMN|LMN2|LMNB lamin B1 protein-coding 151.538-7 chr5 106573034 106573328 + 0.769231 NA Intergenic Intergenic 437833 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 230.769-2 chr8 49674448 49674891 + 0.769231 NA Intergenic L1MD2|LINE|L1 -162489 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA 226.615-4 chr8 105490298 105491089 + 0.769231 NA intron (NM_001362837, intron 3 of 7) intron (NM_001362837, intron 3 of 7) 171150 NM_001362837 23414 Hs.431009 NM_012082 ENSG00000169946 ZFPM2 DIH3|FOG2|SRXY9|ZC2HC11B|ZNF89B|hFOG-2 zinc finger protein, FOG family member 2 protein-coding 167.384-2 chr11 29618598 29619009 + 0.769231 NA promoter-TSS (NR_149106) promoter-TSS (NR_149106) 1 NR_149106 105376606 Hs.577275 NR_149106 ENSG00000255117 LINC02546 - long intergenic non-protein coding RNA 2546 ncRNA 167.692-2 chr11 103736162 103736526 + 0.769231 NA Intergenic Intergenic -113562 NR_039842 100616457 NR_039842 ENSG00000264200 MIR4693 - microRNA 4693 ncRNA 165.385-3 chr12 90194404 90194693 + 0.769231 NA Intergenic Intergenic -98770 NR_135018 105369893 Hs.577777 NR_135018 LINC02392 - long intergenic non-protein coding RNA 2392 ncRNA 218.615-3 chr3 152294645 152295185 + 0.769231 NA intron (NM_001314057, intron 1 of 11) intron (NM_001314057, intron 1 of 11) -4099 NM_001363870 4154 Hs.201858 NM_021038 ENSG00000152601 MBNL1 EXP|MBNL muscleblind like splicing regulator 1 protein-coding 153.077-2 chr16 76766676 76766983 + 0.769231 NA Intergenic L1MC3|LINE|L1 -102107 NR_039870 100616172 NR_039870 ENSG00000266426 MIR4719 - microRNA 4719 ncRNA 159.538-9 chrX 53999558 54000033 + 0.769231 NA intron (NM_001184898, intron 11 of 21) intron (NM_001184898, intron 11 of 21) 43352 NM_001184898 23133 Hs.133352 NM_015107 ENSG00000172943 PHF8 JHDM1F|KDM7B|MRXSSD|ZNF422 PHD finger protein 8 protein-coding 154.615 chr1 116546820 116547180 + 0.769231 NA intron (NM_001779, intron 1 of 5) Tigger2a|DNA|TcMar-Tigger 13111 NR_039621 100616384 NR_039621 ENSG00000264419 MIR548AC - microRNA 548ac ncRNA 199.538 chr1 237421889 237422450 + 0.769231 NA intron (NM_001035, intron 11 of 104) intron (NM_001035, intron 11 of 104) -48950 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 155.077-12 chr4 134254195 134254456 + 0.769231 NA Intergenic L1MA4|LINE|L1 -52536 NM_001114734 132430 Hs.49889 NM_001114734 ENSG00000254535 PABPC4L - poly(A) binding protein cytoplasmic 4 like protein-coding 155.385-11 chr5 45489994 45490237 + 0.769231 NA intron (NM_021072, intron 2 of 7) L2c|LINE|L2 206265 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 169.462-2 chr12 28791565 28792078 + 0.769231 NA Intergenic Intergenic -357457 NM_001271783 55711 Hs.684482 NM_018099 ENSG00000064763 FAR2 HEL-S-81|MLSTD1|SDR10E2 fatty acyl-CoA reductase 2 protein-coding 232.923 chr5 42071208 42071689 + 0.769231 NA Intergenic L2|LINE|L2 103897 NR_104636 101926960 Hs.365692 NR_104635 LOC101926960 - uncharacterized LOC101926960 ncRNA 157.846-14 chr4 107158347 107158856 + 0.769231 NA Intergenic Zaphod2|DNA|hAT-Tip100 -122288 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding 279.769 chr2 184873806 184874550 + 0.769231 NA intron (NM_194250, intron 2 of 3) L1ME3F|LINE|L1 275649 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding 176.923-5 chr2 162061438 162061830 + 0.769231 NA intron (NM_001935, intron 2 of 25) intron (NM_001935, intron 2 of 25) 12581 NM_001935 1803 Hs.368912 NM_001935 ENSG00000197635 DPP4 ADABP|ADCP2|CD26|DPPIV|TP103 dipeptidyl peptidase 4 protein-coding 231.385-2 chr4 18027130 18027443 + 0.769231 NA Intergenic Intergenic -5411 NR_158568 254251 Hs.446201 NM_153686 ENSG00000178177 LCORL MLR1 ligand dependent nuclear receptor corepressor like protein-coding 168.154 chr10 84831261 84831529 + 0.769231 NA Intergenic Intergenic 367510 NR_120668 101929624 Hs.588831 NR_120667 ENSG00000237267 LINC01519 - long intergenic non-protein coding RNA 1519 ncRNA 183.308-2 chr10 52114783 52115126 + 0.769231 NA intron (NM_001098512, intron 7 of 17) intron (NM_001098512, intron 7 of 17) 199174 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA 172.692-3 chr6 67516326 67516709 + 0.769231 NA Intergenic L1MEg|LINE|L1 -538834 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 233.077 chr7 52282854 52283230 + 0.769231 NA Intergenic Intergenic -752591 NM_182595 285877 Hs.381970 NM_182595 ENSG00000221900 POM121L12 - POM121 transmembrane nucleoporin like 12 protein-coding 156.692-6 chr4 43316206 43316425 + 0.769231 NA Intergenic MLT1C|LTR|ERVL-MaLR 176228 NR_146993 105374436 Hs.170605 NR_146993 ENSG00000248143 LINC02383 - long intergenic non-protein coding RNA 2383 ncRNA 164.846-6 chr6 54152821 54153140 + 0.769231 NA intron (NM_001281746, intron 5 of 11) intron (NM_001281746, intron 5 of 11) 41537 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding 217.846-6 chr5 120185468 120185994 + 0.769231 NA Intergenic L1MA1|LINE|L1 -278547 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding 210.308-5 chr2 223313251 223313659 + 0.769231 NA Intergenic MLT1K|LTR|ERVL-MaLR 261525 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding 180.923 chr10 92510073 92510768 + 0.769231 NA intron (NM_001322794, intron 4 of 23) intron (NM_001322794, intron 4 of 23) -12659 NM_001322797 3416 Hs.500546 NM_004969 ENSG00000119912 IDE INSULYSIN insulin degrading enzyme protein-coding 152.154-10 chr22 37087264 37087544 + 0.769231 NA intron (NM_153609, intron 7 of 17) intron (NM_153609, intron 7 of 17) 16249 NM_153609 164656 Hs.370885 NM_153609 ENSG00000187045 TMPRSS6 IRIDA transmembrane serine protease 6 protein-coding 169.846-7 chr8 111266433 111266676 + 0.769231 NA Intergenic Intergenic -30351 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA 161.692-3 chr12 22524365 22524578 + 0.769231 NA intron (NM_001286176, intron 6 of 26) intron (NM_001286176, intron 6 of 26) 19726 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding 173.231-4 chr2 75992253 75992622 + 0.769231 NA Intergenic L1M2|LINE|L1 -281522 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 177.077-3 chr22 33370636 33370909 + 0.769231 NA intron (NM_133642, intron 9 of 14) intron (NM_133642, intron 9 of 14) 65897 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA 184.615-2 chr14 60861064 60861480 + 0.769231 NA intron (NM_002431, intron 6 of 7) intron (NM_002431, intron 6 of 7) 119807 NM_020810 57570 Hs.380159 NM_020810 ENSG00000126814 TRMT5 COXPD26|KIAA1393|TRM5 tRNA methyltransferase 5 protein-coding 160.154-17 chrX 42000019 42000560 + 0.769231 NA Intergenic LTR16C|LTR|ERVL -76735 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding 156.154-5 chr2 183929876 183930291 + 0.769231 NA Intergenic Intergenic -448892 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA 166.769-7 chr2 121141522 121141905 + 0.769231 NA Intergenic L1ME1|LINE|L1 143489 NM_014553 29842 Hs.156471 NM_014553 ENSG00000115112 TFCP2L1 CRTR1|LBP-9|LBP9 transcription factor CP2 like 1 protein-coding 185.077-2 chr15 83068275 83068829 + 0.769231 NA Intergenic AluSx3|SINE|Alu 1217 NR_039740 100616404 NR_039740 ENSG00000263643 MIR4515 mir-4515 microRNA 4515 ncRNA 153.231 chr1 109143606 109144040 + 0.769231 NA intron (NM_001284352, intron 1 of 20) AluJb|SINE|Alu 29708 NM_020775 57535 Hs.708190 NM_020775 ENSG00000116299 KIAA1324 EIG121 KIAA1324 protein-coding 174.231-3 chr1 164965575 164965801 + 0.769231 NA Intergenic MLT1L|LTR|ERVL-MaLR -191047 NR_038072 100505795 Hs.661039 NR_038072 ENSG00000233693 LOC100505795 - uncharacterized LOC100505795 ncRNA 179.308-2 chr2 148058126 148058611 + 0.769231 NA intron (NM_018328, intron 2 of 14) MIRc|SINE|MIR -36764 NM_181742 5000 Hs.558364 NM_002552 ENSG00000115947 ORC4 ORC4L|ORC4P origin recognition complex subunit 4 protein-coding 212.462 chr13 88073256 88073763 + 0.769231 NA Intergenic Intergenic -69358 NR_131919 105370306 Hs.560133 NR_131919 ENSG00000231019 LINC00373 - long intergenic non-protein coding RNA 373 ncRNA 164.846-3 chr11 87416129 87416615 + 0.769231 NA Intergenic L1MA4A|LINE|L1 303039 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA 162-10 chr5 7560288 7560527 + 0.769231 NA intron (NM_020546, intron 3 of 24) intron (NM_020546, intron 3 of 24) 164269 NM_020546 108 Hs.481545 NM_020546 ENSG00000078295 ADCY2 AC2|HBAC2 adenylate cyclase 2 protein-coding 165.231-11 chr4 63473063 63473515 + 0.769231 NA Intergenic Intergenic 936161 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 174.615 chr1 81867529 81868001 + 0.769231 NA intron (NM_001366002, intron 3 of 20) intron (NM_001366002, intron 3 of 20) 65312 NM_001366007 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding 187.539 chr10 57092797 57093413 + 0.769231 NA Intergenic Intergenic 211454 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 165.077 chr10 60382454 60382792 + 0.769231 NA intron (NM_001204403, intron 2 of 43) intron (NM_001204403, intron 2 of 43) 7252 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding 208.308 chr11 30729487 30729962 + 0.769231 NA Intergenic Intergenic -143371 NM_001145399 744 Hs.289795 NM_001584 ENSG00000066382 MPPED2 239FB|C11orf8 metallophosphoesterase domain containing 2 protein-coding 156-11 chr2 144207301 144207631 + 0.769231 NA intron (NM_001284238, intron 4 of 13) intron (NM_001284238, intron 4 of 13) 4113 NM_001284233 79712 Hs.44780 NM_024659 ENSG00000121964 GTDC1 Hmat-Xa|mat-Xa glycosyltransferase like domain containing 1 protein-coding 186.846 chr10 57363842 57364161 + 0.769231 NA Intergenic Intergenic -59442 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 163.231-11 chr8 73433946 73434210 + 0.769231 NA intron (NM_001164383, intron 8 of 9) MLT1D|LTR|ERVL-MaLR 14004 NR_038406 100128126 Hs.679921 NR_038406 ENSG00000253302 STAU2-AS1 - STAU2 antisense RNA 1 ncRNA 160.154 chr1 90175631 90175868 + 0.769231 NA Intergenic Intergenic 180639 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding 253.231-2 chr2 78508448 78508830 + 0.769231 NA Intergenic Intergenic -36892 NR_136311 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA 253.077 chr1 158532827 158533588 + 0.769231 NA Intergenic L1ME1|LINE|L1 14898 NM_001005189 391112 Hs.553780 NM_001005189 ENSG00000197532 OR6Y1 OR1-11|OR6Y2 olfactory receptor family 6 subfamily Y member 1 protein-coding 154-4 chr3 88822771 88823101 + 0.769231 NA Intergenic Intergenic -284685 NM_005233 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 256.539 chr2 35435828 35436413 + 0.769231 NA Intergenic Intergenic -35285 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 212.615-2 chr3 101306837 101307300 + 0.769231 NA intron (NM_016247, intron 2 of 18) L1ME2z|LINE|L1 13507 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding 152.385-2 chr10 74826183 74826516 + 0.769231 NA promoter-TSS (NM_012330) promoter-TSS (NM_012330) -64 NM_001256469 23522 Hs.35758 NM_012330 ENSG00000156650 KAT6B GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf lysine acetyltransferase 6B protein-coding 216.923-2 chr10 62666973 62667280 + 0.769231 NA intron (NM_199451, intron 7 of 7) MLT1L|LTR|ERVL-MaLR -137594 NM_032804 84890 Hs.99821 NM_032804 ENSG00000181915 ADO C10orf22 2-aminoethanethiol dioxygenase protein-coding 196.308-2 chr4 48582570 48583089 + 0.769231 NA intron (NM_015030, intron 19 of 63) intron (NM_015030, intron 19 of 63) 92577 NM_175619 326340 Hs.276457 NM_175619 ENSG00000182223 ZAR1 Z3CXXC6 zygote arrest 1 protein-coding 216.538 chr2 241282935 241283461 + 0.769231 NA intron (NM_005336, intron 1 of 27) Tigger1|DNA|TcMar-Tigger -10312 NM_001243900 3069 Hs.471851 NM_005336 ENSG00000115677 HDLBP HBP|PRO2900|VGL high density lipoprotein binding protein protein-coding 231.846 chr1 93369321 93369949 + 0.769231 NA TTS (NM_001938) TTS (NM_001938) 23728 NM_001938 1810 Hs.348418 NM_001938 ENSG00000117505 DR1 NC2|NC2-BETA|NC2B|NCB2 down-regulator of transcription 1 protein-coding 205.769-2 chr6 88426087 88426534 + 0.769231 NA Intergenic Intergenic 113059 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA 151.692-7 chr5 28408259 28408631 + 0.769231 NA Intergenic MER66-int|LTR|ERV1 -120780 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA 182.923-5 chr7 67865847 67866139 + 0.769231 NA Intergenic Intergenic -154260 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA 174.154-6 chr18 6749253 6749666 + 0.769231 NA intron (NM_001366230, intron 1 of 17) intron (NM_001366230, intron 1 of 17) -19597 NR_134645 101927168 Hs.242240 NR_134645 LOC101927168 - uncharacterized LOC101927168 ncRNA 168.615-3 chr18 33131200 33131622 + 0.769231 NA intron (NM_001308126, intron 20 of 23) intron (NM_001308126, intron 20 of 23) 309160 NM_001371121 224.769 chr11 56582025 56582408 + 0.769231 NA Intergenic L1ME2|LINE|L1 -4495 NM_001004741 390167 Hs.553750 NM_001004741 ENSG00000254834 OR5M10 OR11-207 olfactory receptor family 5 subfamily M member 10 protein-coding 166.154-3 chr2 8471519 8471756 + 0.769231 NA Intergenic Intergenic 112155 NR_110257 101929567 Hs.634706 NR_110257 ENSG00000236008 LINC01814 - long intergenic non-protein coding RNA 1814 ncRNA 164.769-9 chr9 25216032 25216346 + 0.769231 NA Intergenic Intergenic 462669 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 189.846-5 chr7 28703827 28704304 + 0.769231 NA intron (NM_001011666, intron 1 of 6) intron (NM_001011666, intron 1 of 6) 17932 NM_001011666 9586 Hs.437075 NM_004904 ENSG00000146592 CREB5 CRE-BPA|CREB-5|CREBPA cAMP responsive element binding protein 5 protein-coding 191.385-3 chr2 50934026 50934600 + 0.769231 NA intron (NM_004801, intron 2 of 21) intron (NM_004801, intron 2 of 21) 97819 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 185.769-2 chr4 45590980 45591348 + 0.769231 NA Intergenic Intergenic 532890 NM_173536 2565 Hs.375051 NM_173536 ENSG00000163285 GABRG1 - gamma-aminobutyric acid type A receptor gamma1 subunit protein-coding 216.846-4 chrX 93471216 93471709 + 0.769231 NA Intergenic L1PA16|LINE|L1 202116 NM_004538 4675 Hs.21365 NM_004538 ENSG00000186310 NAP1L3 MB20|NPL3 nucleosome assembly protein 1 like 3 protein-coding 161.923-4 chr21 30695470 30695716 + 0.769231 NA Intergenic AluSg|SINE|Alu 23184 NM_001164435 100288323 Hs.580877 NM_001164435 ENSG00000231068 KRTAP21-3 - keratin associated protein 21-3 protein-coding 271.846-2 chr2 167413237 167413736 + 0.769231 NA Intergenic L1M5|LINE|L1 226114 NM_001199145 129446 Hs.73680 NM_152381 ENSG00000163092 XIRP2 CMYA3 xin actin binding repeat containing 2 protein-coding 164.615-13 chr9 82362503 82362793 + 0.769231 NA Intergenic Intergenic 373876 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding 162.692-5 chr16 52668228 52668613 + 0.769231 NA Intergenic Intergenic -61445 NR_033920 643714 Hs.662199 NR_033920 ENSG00000249231 CASC16 LINC00918 cancer susceptibility 16 ncRNA 154.385-8 chr7 104157146 104157585 + 0.769231 NA intron (NM_002553, intron 12 of 13) intron (NM_002553, intron 12 of 13) 50648 NM_002553 5001 Hs.432948 NM_002553 ENSG00000164815 ORC5 ORC5L|ORC5P|ORC5T|PPP1R117 origin recognition complex subunit 5 protein-coding 164.692-5 chr22 20393238 20393556 + 0.769231 NA promoter-TSS (NM_003426) promoter-TSS (NM_003426) -718 NM_001256524 7625 Hs.517418 NM_003426 ENSG00000185252 ZNF74 COS52|ZFP520|ZNF520|hZNF7 zinc finger protein 74 protein-coding 176.923-7 chr3 3175611 3176035 + 0.769231 NA intron (NM_016302, intron 1 of 10) L1MC3|LINE|L1 3894 NM_001173482 51185 Hs.18925 NM_016302 ENSG00000113851 CRBN MRT2|MRT2A cereblon protein-coding 163.692-6 chr5 121820931 121821249 + 0.769231 NA Intergenic Intergenic -30792 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding 168.308-2 chr2 197060244 197060502 + 0.769231 NA intron (NM_001367496, intron 16 of 27) MIRb|SINE|MIR -133666 NM_001321099 80055 Hs.229988 NM_024989 ENSG00000197121 PGAP1 Bst1|ISPD3024|MRT42|SPG67 post-GPI attachment to proteins 1 protein-coding 167.692-4 chr22 27267293 27267591 + 0.769231 NA Intergenic Intergenic -42763 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding 194.615-3 chr20 52964958 52965455 + 0.769231 NA Intergenic Intergenic -7152 NM_173485 128553 Hs.473117 NM_173485 ENSG00000182463 TSHZ2 C20orf17|OVC10-2|TSH2|ZABC2|ZNF218 teashirt zinc finger homeobox 2 protein-coding 186.923-9 chr4 107221472 107221807 + 0.769231 NA Intergenic Intergenic -185326 NM_014421 27123 Hs.211869 NM_014421 ENSG00000155011 DKK2 DKK-2 dickkopf WNT signaling pathway inhibitor 2 protein-coding 198.769-2 chr5 140314863 140315210 + 0.769231 NA Intergenic MIR3|SINE|MIR -11935 NM_002622 5201 Hs.483564 NM_002622 ENSG00000113068 PFDN1 PDF|PFD1 prefoldin subunit 1 protein-coding 169.846-6 chr7 11631487 11631732 + 0.769231 NA intron (NM_015204, intron 2 of 26) LTR54|LTR|ERV1 200589 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding 165.385-7 chr20 7198406 7198643 + 0.769231 NA intron (NR_110609, intron 3 of 7) intron (NR_110609, intron 3 of 7) 55678 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA 170.308-5 chr18 49349973 49350251 + 0.769231 NA intron (NM_001353210, intron 6 of 16) L1ME4b|LINE|L1 110533 NM_001353211 54808 Hs.162996 NM_017653 ENSG00000141627 DYM DMC|SMC dymeclin protein-coding 189 chr10 57874209 57874749 + 0.769231 NA Intergenic HAL1ME|LINE|L1 393415 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding 178.769-7 chr4 101851800 101852243 + 0.769231 NA intron (NM_017935, intron 2 of 16) HAL1ME|LINE|L1 38179 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding 220.692 chr1 30055935 30056423 + 0.769231 NA Intergenic Intergenic -18567 NR_110790 101929406 Hs.639413 NR_110790 ENSG00000233399 LINC01648 - long intergenic non-protein coding RNA 1648 ncRNA 233.615 chr14 85794730 85795579 + 0.769231 NA Intergenic Intergenic -139524 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 178.308 chr10 63210397 63210842 + 0.769231 NA intron (NM_001322258, intron 7 of 24) intron (NM_001322258, intron 7 of 24) 58604 NR_134512 221037 Hs.413416 NM_004241 ENSG00000171988 JMJD1C KDM3C|TRIP-8|TRIP8 jumonji domain containing 1C protein-coding 217.846-5 chr5 98304585 98305094 + 0.769231 NA Intergenic Intergenic -143600 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA 203.077-4 chr20 8096490 8096867 + 0.769231 NA Intergenic Charlie7a|DNA|hAT-Charlie -35588 NM_015192 23236 Hs.431173 NM_015192 ENSG00000182621 PLCB1 EIEE12|PI-PLC|PLC-154|PLC-I|PLC-beta-1|PLC154|PLCB1A|PLCB1B phospholipase C beta 1 protein-coding 178-4 chr8 112783948 112784309 + 0.769231 NA intron (NM_001363185, intron 11 of 66) L1MA3|LINE|L1 140635 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 155-5 chr5 22918253 22918541 + 0.769231 NA Intergenic Intergenic -65053 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 175.769-2 chr1 172355724 172356099 + 0.769231 NA intron (NM_015569, intron 17 of 20) L1MEd|LINE|L1 -64774 NM_139240 92346 Hs.517991 NM_139240 ENSG00000180999 C1orf105 - chromosome 1 open reading frame 105 protein-coding 248.231 chr6 66387168 66387860 + 0.769231 NA Intergenic Intergenic 599635 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 239.231 chr5 99667123 99667659 + 0.769231 NA Intergenic Intergenic 133401 NR_110562 102724855 Hs.519477 NR_110562 LINC02113 CTD-2151A2.1 long intergenic non-protein coding RNA 2113 ncRNA 194.692-2 chr10 84368862 84369433 + 0.769231 NA intron (NM_018999, intron 1 of 10) L1PB3|LINE|L1 40558 NM_001351290 54462 Hs.461988 NM_018999 ENSG00000107771 CCSER2 FAM190B|Gcap14|KIAA1128|bA486O22.1 coiled-coil serine rich protein 2 protein-coding 198-3 chr7 50706671 50706942 + 0.769231 NA intron (NM_001001555, intron 2 of 16) MIR|SINE|MIR -1505 NM_001001550 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding 156.231-3 chr2 103627866 103628289 + 0.769231 NA Intergenic Intergenic -643648 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 180.769-2 chr14 59441375 59441738 + 0.769231 NA Intergenic Intergenic 23824 NM_022571 64582 Hs.647573 NM_022571 ENSG00000181619 GPR135 HUMNPIIY20 G protein-coupled receptor 135 protein-coding 158.923-9 chr4 173077757 173078024 + 0.769231 NA Intergenic Intergenic -90921 NM_017423 51809 Hs.548088 NM_017423 ENSG00000109586 GALNT7 GALNAC-T7|GalNAcT7 polypeptide N-acetylgalactosaminyltransferase 7 protein-coding 169.231 chr10 51519297 51519531 + 0.769231 NA intron (NM_001098512, intron 3 of 17) MIRb|SINE|MIR 180181 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding 171.077-5 chr14 72273464 72273807 + 0.769231 NA intron (NM_001370288, intron 2 of 16) intron (NM_001370288, intron 2 of 16) -243185 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 182-2 chr4 99889707 99890136 + 0.769231 NA intron (NM_021970, intron 3 of 6) intron (NM_021970, intron 3 of 6) 4506 NM_021970 8649 Hs.433332 NM_021970 ENSG00000109270 LAMTOR3 MAP2K1IP1|MAPBP|MAPKSP1|MP1|PRO0633|Ragulator3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 protein-coding 178.769-5 chr4 30355323 30355768 + 0.769231 NA Intergenic Intergenic -364824 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 184.846-3 chr12 66381014 66381607 + 0.769231 NA intron (NM_001366722, intron 19 of 24) intron (NM_001366722, intron 19 of 24) 78765 NM_033647 92797 Hs.505941 NM_033647 ENSG00000127311 HELB DHB|hDHB DNA helicase B protein-coding 154.923-3 chr11 66140186 66140624 + 0.769231 NA intron (NM_018026, intron 1 of 23) intron (NM_018026, intron 1 of 23) 70133 NM_018026 55690 Hs.644326 NM_018026 ENSG00000175115 PACS1 MRD17|SHMS phosphofurin acidic cluster sorting protein 1 protein-coding 164.231-10 chr9 10445172 10445523 + 0.769231 NA intron (NM_002839, intron 2 of 45) intron (NM_002839, intron 2 of 45) 167655 NM_002839 5789 Hs.446083 NM_002839 ENSG00000153707 PTPRD HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA protein tyrosine phosphatase receptor type D protein-coding 195.462-2 chr2 187115656 187115991 + 0.769231 NA Intergenic Intergenic -266653 NM_182521 151112 Hs.375054 NM_182521 ENSG00000163012 ZSWIM2 MEX|ZZZ2 zinc finger SWIM-type containing 2 protein-coding 159.231-6 chr2 187740225 187740544 + 0.769231 NA Intergenic Intergenic -185879 NM_001032281 7035 Hs.516578 NM_006287 ENSG00000003436 TFPI EPI|LACI|TFI|TFPI1 tissue factor pathway inhibitor protein-coding 176.769-7 chr3 165603987 165604455 + 0.769231 NA Intergenic L1PB|LINE|L1 233202 NR_137635 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding 223.846-2 chr5 41186615 41187045 + 0.769231 NA intron (NM_000065, intron 5 of 17) MIR|SINE|MIR 26702 NM_000065 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding 188.077 chr16 24652455 24652918 + 0.769231 NA intron (NM_001351850, intron 2 of 23) intron (NM_001351850, intron 2 of 23) 18376 NR_122072 400511 Hs.592028 NR_122072 ENSG00000224310 LINC01567 LOCCS long intergenic non-protein coding RNA 1567 ncRNA 151.692-8 chr9 79888910 79889200 + 0.769231 NA intron (NR_121213, intron 1 of 2) ERVL-E-int|LTR|ERVL 64525 NR_121213 101927477 Hs.571630 NR_121212 LINC01507 XLOC_000303 long intergenic non-protein coding RNA 1507 ncRNA 242.384 chr3 1212830 1213289 + 0.769231 NA intron (NM_001289080, intron 2 of 22) intron (NM_001289080, intron 2 of 22) 120035 NM_001349360 27255 Hs.387300 NM_014461 ENSG00000134115 CNTN6 NB3 contactin 6 protein-coding 163.231-13 chr8 119386210 119386558 + 0.769231 NA Intergenic Intergenic -30062 NM_002514 4856 Hs.235935 NM_002514 ENSG00000136999 CCN3 IBP-9|IGFBP-9|IGFBP9|NOV|NOVh cellular communication network factor 3 protein-coding 227.462 chr1 86709792 86710112 + 0.769231 NA intron (NM_001206653, intron 1 of 7) intron (NM_001206653, intron 1 of 7) 5376 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding 157.462-7 chr8 28569602 28570151 + 0.769231 NA 3' UTR (NM_145866, exon 7 of 7) 3' UTR (NM_145866, exon 7 of 7) -64694 NR_036250 100422903 NR_036250 ENSG00000265251 MIR4288 - microRNA 4288 ncRNA 162.615-6 chr4 43120886 43121234 + 0.769231 NA Intergenic THE1A-int|LTR|ERVL-MaLR 227794 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 168.539-4 chr18 67690177 67690543 + 0.769231 NA intron (NR_033921, intron 1 of 4) L1M8|LINE|L1 124462 NR_146471 101927430 Hs.621261 NR_146471 ENSG00000265555 LINC01903 - long intergenic non-protein coding RNA 1903 ncRNA 207.308-4 chr8 78604000 78604355 + 0.769231 NA 3' UTR (NM_006823, exon 4 of 4) 3' UTR (NM_006823, exon 4 of 4) -45674 NR_125389 101927003 Hs.614849 NR_125389 ENSG00000254266 PKIA-AS1 - PKIA antisense RNA 1 ncRNA 181.846-5 chr16 50772477 50772884 + 0.769231 NA intron (NM_015247, intron 7 of 19) L1ME4b|LINE|L1 30375 NR_130462 100422972 NR_130462 ENSG00000264947 MIR3181 - microRNA 3181 ncRNA 184.615-3 chr15 79969346 79969724 + 0.769231 NA intron (NM_001114735, intron 1 of 2) intron (NM_001114735, intron 1 of 2) 1661 NM_004049 597 Hs.227817 NM_004049 ENSG00000140379 BCL2A1 ACC-1|ACC-2|ACC1|ACC2|BCL2L5|BFL1|GRS|HBPA1 BCL2 related protein A1 protein-coding 183.231-4 chr12 26890694 26891213 + 0.769231 NA Intergenic Intergenic 47028 NM_018164 55726 Hs.505077 NM_018164 ENSG00000064102 INTS13 ASUN|C12orf11|GCT1|Mat89Bb|NET48|SPATA30 integrator complex subunit 13 protein-coding 156.308-7 chr3 113997517 113997834 + 0.769231 NA intron (NR_148531, intron 11 of 14) L1MC4a|LINE|L1 49662 NM_001320467 254887 Hs.21902 NM_173570 ENSG00000184307 ZDHHC23 DHHC-23|NIDD zinc finger DHHC-type containing 23 protein-coding 205.846-6 chr7 27811725 27812141 + 0.769231 NA intron (NM_001362795, intron 13 of 14) L1ME1|LINE|L1 71838 NM_001362794 8887 Hs.34576 NM_006024 ENSG00000106052 TAX1BP1 CALCOCO3|T6BP|TXBP151 Tax1 binding protein 1 protein-coding 245.923-3 chr15 57902414 57902921 + 0.769231 NA Intergenic AluJr4|SINE|Alu 111356 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding 164.615-9 chr2 135430485 135430896 + 0.769231 NA intron (NM_001286569, intron 2 of 21) L1M4|LINE|L1 99895 NM_001286568 84083 Hs.658422 NM_032143 ENSG00000121988 ZRANB3 4933425L19Rik|AH2 zinc finger RANBP2-type containing 3 protein-coding 164-9 chr4 71208496 71208993 + 0.769231 NA intron (NM_001098484, intron 1 of 25) intron (NM_001098484, intron 1 of 25) 21458 NM_001134742 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding 155.384-2 chr9 3777724 3778117 + 0.769231 NA Intergenic Intergenic 109834 NR_121586 101929302 Hs.122828 NR_121586 ENSG00000232104 RFX3-AS1 CVAT7 RFX3 antisense RNA 1 ncRNA 213.692 chr10 110344804 110345327 + 0.769231 NA Intergenic Intergenic -40145 NM_005871 10285 Hs.632093 NM_005871 ENSG00000119953 SMNDC1 SMNR|SPF30|TDRD16C survival motor neuron domain containing 1 protein-coding 199.231-3 chr14 63614507 63614939 + 0.769231 NA intron (NM_080666, intron 2 of 2) intron (NM_080666, intron 2 of 2) 27148 NM_080666 112840 Hs.655666 NM_080666 ENSG00000140006 WDR89 C14orf150|MSTP050 WD repeat domain 89 protein-coding 198.846-2 chr21 29306572 29306925 + 0.769231 NA intron (NR_027655, intron 1 of 7) intron (NR_027655, intron 1 of 7) 1544 NR_027655 571 Hs.154276 NM_001186 ENSG00000156273 BACH1 BACH-1|BTBD24 BTB domain and CNC homolog 1 protein-coding 208.308-3 chr20 31067889 31068526 + 0.769231 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -189457 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 170.769-2 chr11 67564206 67564433 + 0.769231 NA Intergenic MER41A|LTR|ERV1 -19276 NM_000852 2950 Hs.523836 NM_000852 ENSG00000084207 GSTP1 DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI glutathione S-transferase pi 1 protein-coding 164.462 chr21 24364203 24364557 + 0.769231 NA Intergenic Intergenic -43003 NR_109963 101927869 Hs.555591 NR_109963 ENSG00000224832 LINC01689 - long intergenic non-protein coding RNA 1689 ncRNA 236.692 chr18 5277314 5277808 + 0.769231 NA Intergenic L1ME4a|LINE|L1 18165 NM_001243702 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding 249.231 chr14 56282132 56282568 + 0.769231 NA intron (NM_021255, intron 3 of 5) intron (NM_021255, intron 3 of 5) 163939 NM_021255 57161 Hs.657926 NM_021255 ENSG00000139946 PELI2 - pellino E3 ubiquitin protein ligase family member 2 protein-coding 163.385 chr11 94088100 94088401 + 0.769231 NA intron (NM_001098672, intron 11 of 19) intron (NM_001098672, intron 11 of 19) -40591 NM_015368 24145 Hs.591976 NM_015368 ENSG00000110218 PANX1 MRS1|PX1|UNQ2529 pannexin 1 protein-coding 157.308-11 chr8 139115029 139115397 + 0.769231 NA Intergenic Intergenic -201172 NM_152888 169044 Hs.117169 NM_152888 ENSG00000169436 COL22A1 - collagen type XXII alpha 1 chain protein-coding 176.538-3 chr18 5280118 5280657 + 0.769231 NA Intergenic HAL1|LINE|L1 15339 NM_001243702 7541 Hs.592340 NM_003409 ENSG00000198081 ZBTB14 ZF5|ZFP-161|ZFP-5|ZFP161|ZNF478 zinc finger and BTB domain containing 14 protein-coding 158.462-3 chr12 102407337 102407678 + 0.769231 NA intron (NM_000618, intron 3 of 3) MIR|SINE|MIR 71043 NM_001111284 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding 189.923-4 chr18 896540 896909 + 0.769231 NA Intergenic MIRb|SINE|MIR -8147 NM_001099733 116 Hs.531719 NM_001117 ENSG00000141433 ADCYAP1 PACAP adenylate cyclase activating polypeptide 1 protein-coding 152.769-7 chr3 167025519 167025789 + 0.769231 NA Intergenic MER2|DNA|TcMar-Tigger 126971 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA 155.615-8 chr7 129703021 129703276 + 0.769231 NA intron (NM_005011, intron 5 of 10) intron (NM_005011, intron 5 of 10) 67344 NR_029614 406958 NR_029614 ENSG00000207990 MIR182 MIRN182|miRNA182|mir-182 microRNA 182 ncRNA 169.615-2 chr10 38805548 38805905 + 0.769231 NA Intergenic (TTCCA)n|Simple_repeat|Simple_repeat 109130 NR_045000 399746 Hs.742607 NR_045000 ACTR3BP5 FKSG74 ACTR3B pseudogene 5 pseudo 181.538-3 chr7 33281021 33281274 + 0.769231 NA intron (NM_198428, intron 9 of 22) intron (NM_198428, intron 9 of 22) 151583 NM_198428 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding 154.615-3 chr11 116485154 116485527 + 0.769231 NA Intergenic Intergenic -154082 NR_135069 101929011 Hs.733911 NR_135069 ENSG00000237937 LINC02702 - long intergenic non-protein coding RNA 2702 ncRNA 151.538-4 chr20 38525134 38525365 + 0.769231 NA intron (NM_001282917, intron 11 of 29) intron (NM_001282917, intron 11 of 29) 8686 NR_039605 100616190 NR_039605 ENSG00000275453 MIR548O2 - microRNA 548o-2 ncRNA 159.538-5 chr16 47989448 47989711 + 0.769231 NA Intergenic L1MA7|LINE|L1 23890 NR_146502 105371238 Hs.743032 NR_146502 LINC02134 - long intergenic non-protein coding RNA 2134 ncRNA 231.616-2 chr5 133154906 133155273 + 0.769231 NA Intergenic L1ME3G|LINE|L1 103076 NM_002154 3308 Hs.90093 NM_002154 ENSG00000170606 HSPA4 APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY heat shock protein family A (Hsp70) member 4 protein-coding 173.461 chr2 35878218 35878573 + 0.769231 NA Intergenic Intergenic 406990 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 181.231-6 chr8 56953821 56954156 + 0.769231 NA Intergenic MER77|LTR|ERVL 39879 NM_017813 54928 Hs.438689 NM_017813 ENSG00000104331 IMPAD1 GPAPP|IMP 3|IMP-3|IMPA3 inositol monophosphatase domain containing 1 protein-coding 241.692 chr5 14801027 14801526 + 0.769231 NA intron (NM_054027, intron 1 of 11) intron (NM_054027, intron 1 of 11) 24736 NR_039780 100616271 NR_039780 ENSG00000264792 MIR4637 - microRNA 4637 ncRNA 183.539-2 chr5 83958598 83958935 + 0.769231 NA intron (NM_001278642, intron 9 of 9) intron (NM_001278642, intron 9 of 9) -237911 NM_001884 1404 Hs.2799 NM_001884 ENSG00000145681 HAPLN1 CRT1|CRTL1 hyaluronan and proteoglycan link protein 1 protein-coding 195.308-4 chr9 14108239 14108492 + 0.769231 NA intron (NM_001369464, intron 8 of 9) intron (NM_001369464, intron 8 of 9) 72437 NM_001282787 4781 Hs.644095 NM_005596 ENSG00000147862 NFIB CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 nuclear factor I B protein-coding 224.615-3 chr6 141218534 141218861 + 0.769231 NA Intergenic L1MB3|LINE|L1 534883 NR_039675 100616180 NR_039675 ENSG00000264390 MIR4465 - microRNA 4465 ncRNA 178.923-2 chr10 50946321 50946790 + 0.769231 NA Intergenic AluJb|SINE|Alu -44333 NM_001098512 5592 Hs.407535 NM_006258 ENSG00000185532 PRKG1 AAT8|PKG|PKG1|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha protein kinase cGMP-dependent 1 protein-coding 179.846-6 chr8 101546812 101547180 + 0.769231 NA intron (NM_024915, intron 2 of 15) intron (NM_024915, intron 2 of 15) 54557 NM_001330593 79977 Hs.661088 NM_024915 ENSG00000083307 GRHL2 BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 grainyhead like transcription factor 2 protein-coding 168.462 chr11 80901520 80901768 + 0.769231 NA Intergenic Intergenic -138841 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 176.385-2 chr7 19704388 19704813 + 0.769231 NA TTS (NR_036101) TTS (NR_036101) 836 NR_036101 100422967 NR_036101 ENSG00000265932 MIR3146 mir-3146 microRNA 3146 ncRNA 225.308 chr1 45203113 45203960 + 0.769231 NA intron (NM_020883, intron 1 of 13) intron (NM_020883, intron 1 of 13) 3069 NM_020883 57643 Hs.656613 NM_020883 ENSG00000162415 ZSWIM5 - zinc finger SWIM-type containing 5 protein-coding 309.923 chr1 187708913 187709784 + 0.769231 NA Intergenic Intergenic 265720 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 169.231-7 chr5 166428927 166429170 + 0.769231 NA Intergenic UCON26|Unknown|Unknown 497322 NR_108020 102557615 NR_108020 ENSG00000254130 LINC01947 CTB-7E3.1 long intergenic non-protein coding RNA 1947 ncRNA 233.231-3 chr21 34915492 34916014 + 0.769231 NA intron (NM_001754, intron 2 of 8) intron (NM_001754, intron 2 of 8) -27054 NM_001122607 861 Hs.149261 NM_001754 ENSG00000159216 RUNX1 AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha RUNX family transcription factor 1 protein-coding 183.462-3 chr8 92549280 92549682 + 0.769231 NA Intergenic Intergenic 106013 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 169.692-7 chr3 55578934 55579279 + 0.769231 NA intron (NM_015576, intron 16 of 16) MLT1H|LTR|ERVL-MaLR 80363 NR_024615 711 Hs.667161 NR_024615 ENSG00000281708 ERC2-IT1 C1orf1|C3orf51|Po42 ERC2 intronic transcript 1 ncRNA 164.615-3 chr12 24806019 24806443 + 0.769231 NA Intergenic Intergenic 95991 NM_001178094 586 Hs.438993 NM_005504 ENSG00000060982 BCAT1 BCATC|BCT1|ECA39|MECA39|PNAS121|PP18 branched chain amino acid transaminase 1 protein-coding 162.692-9 chr8 136528305 136528669 + 0.769231 NA Intergenic L1MC1|LINE|L1 -2311 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 339.615 chr20 56313543 56314332 + 0.769231 NA Intergenic L1MB5|LINE|L1 -45037 NM_080821 116151 Hs.143736 NM_080821 ENSG00000124098 FAM210B 5A3|C20orf108|dJ1167H4.1 family with sequence similarity 210 member B protein-coding 183.077-2 chr14 81419420 81419808 + 0.769231 NA intron (NM_001366850, intron 2 of 7) intron (NM_001366850, intron 2 of 7) 8161 NM_001256430 85439 Hs.14248 NM_033104 ENSG00000140022 STON2 STN2|STNB|STNB2 stonin 2 protein-coding 175.769-3 chr10 42406690 42407028 + 0.769231 NA Intergenic AluSz6|SINE|Alu -38814 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 187.692-4 chr4 66726633 66727004 + 0.769231 NA Intergenic Intergenic 449994 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 244.692 chr4 52029677 52030152 + 0.769231 NA intron (NM_000232, intron 2 of 5) intron (NM_000232, intron 2 of 5) 8405 NM_000232 6443 Hs.438953 NM_000232 ENSG00000163069 SGCB A3b|LGMD2E|LGMDR4|SGC sarcoglycan beta protein-coding 178.846-3 chr21 19954050 19954388 + 0.769231 NA Intergenic Intergenic -54464 NR_146910 105372746 Hs.580899 NR_146910 ENSG00000233480 LINC01683 C21orf40 long intergenic non-protein coding RNA 1683 ncRNA 191.154-3 chr13 44890437 44890869 + 0.769231 NA Intergenic Intergenic -81023 NR_038433 144817 Hs.585616 NR_038433 ENSG00000235097 LINC00330 NCRNA00330 long intergenic non-protein coding RNA 330 ncRNA 175.077-7 chr6 45502750 45503153 + 0.769231 NA intron (NM_001015051, intron 6 of 7) L2b|LINE|L2 80676 NM_001369405 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding 166.615-8 chr5 122027738 122028014 + 0.769231 NA 3' UTR (NM_152546, exon 8 of 8) 3' UTR (NM_152546, exon 8 of 8) 49298 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding 193.077-3 chr7 49765124 49765550 + 0.769231 NA Intergenic Intergenic -8301 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding 156.923-21 chrX 34236163 34236627 + 0.769231 NA Intergenic MER3|DNA|hAT-Charlie -104065 NM_203408 158724 Hs.143268 NM_203408 ENSG00000185448 FAM47A - family with sequence similarity 47 member A protein-coding 200.615-5 chr4 97308544 97309145 + 0.769231 NA Intergenic MER76|LTR|ERVL -58082 NR_102713 101410545 Hs.628520 NR_102713 ENSG00000251620 STPG2-AS1 - STPG2 antisense RNA 1 ncRNA 180.385-4 chr5 15436692 15437048 + 0.769231 NA Intergenic L1ME1|LINE|L1 -63310 NM_012304 23194 Hs.433057 NM_012304 ENSG00000183580 FBXL7 FBL6|FBL7 F-box and leucine rich repeat protein 7 protein-coding 165.231-5 chr2 38903853 38904127 + 0.769231 NA Intergenic L2a|LINE|L2 -15373 NM_001145451 100271715 Hs.99841 NM_001145451 ENSG00000214694 ARHGEF33 - Rho guanine nucleotide exchange factor 33 protein-coding 203.692-5 chr7 10945267 10945604 + 0.769231 NA Intergenic Intergenic -5282 NM_002489 4697 Hs.50098 NM_002489 ENSG00000189043 NDUFA4 CI-9k|CI-MLRQ|COXFA4|MLRQ NDUFA4 mitochondrial complex associated protein-coding 156.769-12 chr8 115126398 115126703 + 0.769231 NA Intergenic Intergenic 541463 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 157.539-2 chr18 12532094 12532324 + 0.769231 NA intron (NM_020148, intron 4 of 15) intron (NM_020148, intron 4 of 15) 99435 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA 160.769-10 chrX 43696782 43697181 + 0.769231 NA intron (NM_001270458, intron 4 of 15) intron (NM_001270458, intron 4 of 15) 42074 NM_001270458 4128 Hs.183109 NM_000240 ENSG00000189221 MAOA BRNRS|MAO-A monoamine oxidase A protein-coding 217.846 chr20 53571837 53572240 + 0.769231 NA intron (NM_006526, intron 3 of 4) intron (NM_006526, intron 3 of 4) 11059 NM_006526 7764 Hs.155040 NM_006526 ENSG00000171940 ZNF217 ZABC1 zinc finger protein 217 protein-coding 246 chr12 84676569 84677227 + 0.769231 NA Intergenic Intergenic 235901 NM_001146335 55117 Hs.44424 NM_018057 ENSG00000072041 SLC6A15 NTT73|SBAT1|V7-3|hv7-3 solute carrier family 6 member 15 protein-coding 188.308-9 chr7 114031256 114031723 + 0.769231 NA Intergenic MLT1A0|LTR|ERVL-MaLR -54838 NR_033766 93986 Hs.282787 NM_014491 ENSG00000128573 FOXP2 CAGH44|SPCH1|TNRC10 forkhead box P2 protein-coding 160.384-2 chr2 140612064 140612463 + 0.769231 NA intron (NM_018557, intron 41 of 90) intron (NM_018557, intron 41 of 90) -25578 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA 185.384 chr12 125580452 125580903 + 0.769231 NA intron (NM_052907, intron 4 of 8) L1MB8|LINE|L1 -41775 NM_001286219 114795 Hs.524838 NM_052907 ENSG00000139364 TMEM132B - transmembrane protein 132B protein-coding 186-5 chr3 176776465 176776874 + 0.769231 NA Intergenic Intergenic 40332 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA 211.538 chr4 30287819 30288152 + 0.769231 NA Intergenic MLT1B|LTR|ERVL-MaLR -432384 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 153.846-8 chr6 43336535 43336874 + 0.769231 NA 3' UTR (NM_014345, exon 10 of 10) 3' UTR (NM_014345, exon 10 of 10) -27878 NM_206922 401262 Hs.653165 NM_206922 ENSG00000146215 CRIP3 CRP-3|TLP|TLP-A|h6LIMo cysteine rich protein 3 protein-coding 165.846-6 chr5 93861074 93861471 + 0.769231 NA intron (NM_032042, intron 7 of 10) intron (NM_032042, intron 7 of 10) -119672 NM_153216 134187 Hs.678995 NM_153216 ENSG00000248483 POU5F2 SPRM-1 POU domain class 5, transcription factor 2 protein-coding 153.077-5 chr5 85574702 85574956 + 0.769231 NA Intergenic Intergenic -707615 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 201.308-6 chr2 237114545 237115073 + 0.769231 NA Intergenic L1MEd|LINE|L1 28920 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding 167.846-4 chr12 59977020 59977455 + 0.769231 NA Intergenic Intergenic 287867 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 151.615-2 chr10 64671075 64671482 + 0.769231 NA Intergenic Intergenic -154250 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 204.615-3 chr5 79552096 79552508 + 0.769231 NA Intergenic Intergenic -38168 NM_004272 9456 Hs.591761 NM_004272 ENSG00000152413 HOMER1 HOMER|HOMER1A|HOMER1B|HOMER1C|SYN47|Ves-1 homer scaffold protein 1 protein-coding 152.692-8 chr8 85111450 85111673 + 0.769231 NA intron (NM_033402, intron 3 of 18) intron (NM_033402, intron 3 of 18) 4323 NM_001349636 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding 206.385-2 chr2 15213372 15213873 + 0.769231 NA intron (NR_052013, intron 47 of 50) MIRb|SINE|MIR 347712 NR_052013 51594 Hs.467759 NM_015909 ENSG00000151779 NBAS ILFS2|NAG|SOPH neuroblastoma amplified sequence protein-coding 154.538-6 chr5 44802826 44803087 + 0.769231 NA intron (NR_109863, intron 1 of 3) intron (NR_109863, intron 1 of 3) 5837 NR_109863 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA 152.308-9 chr6 75164568 75164814 + 0.769231 NA intron (NM_004370, intron 14 of 65) L1MC1|LINE|L1 -35909 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA 157.692-12 chr9 87543055 87543451 + 0.769231 NA intron (NM_004938, intron 2 of 25) intron (NM_004938, intron 2 of 25) -10201 NR_146781 100506897 Hs.656160 NR_146781 ENSG00000236709 DAPK1-IT1 - DAPK1 intronic transcript 1 ncRNA 176.769-3 chr17 27352243 27352555 + 0.769231 NA Intergenic Intergenic 58285 NM_015626 26118 Hs.446017 NM_015626 ENSG00000109046 WSB1 SWIP1|WSB-1 WD repeat and SOCS box containing 1 protein-coding 183.692-7 chr8 117289847 117290226 + 0.769231 NA Intergenic L1MC3|LINE|L1 155041 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 201.077-2 chr14 85945628 85946017 + 0.769231 NA intron (NR_110155, intron 1 of 3) MIRb|SINE|MIR 11144 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 187.385-5 chr4 56409605 56410010 + 0.769231 NA intron (NR_156493, intron 1 of 10) intron (NR_156493, intron 1 of 10) -22299 NM_001286671 132949 Hs.104347 NM_181806 ENSG00000157426 AASDH ACSF4|LYS2|NRPS1098|NRPS998 aminoadipate-semialdehyde dehydrogenase protein-coding 195.846-3 chr20 62171353 62171801 + 0.769231 NA intron (NR_125980, intron 9 of 12) intron (NR_125980, intron 9 of 12) -11448 NM_015666 26164 Hs.340636 NM_015666 ENSG00000101181 MTG2 GTPBP5|ObgH1|dJ1005F21.2 mitochondrial ribosome associated GTPase 2 protein-coding 222 chr14 84228954 84229371 + 0.769231 NA Intergenic Intergenic -1042770 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 166.615-13 chr8 90202409 90202772 + 0.769231 NA Intergenic L1ME3E|LINE|L1 -18898 NR_051989 100874052 Hs.571514 NR_051989 ENSG00000253394 LINC00534 - long intergenic non-protein coding RNA 534 ncRNA 226.923 chr2 99012210 99012701 + 0.769231 NA intron (NR_146001, intron 18 of 18) L1PB1|LINE|L1 -76230 NM_207362 343990 Hs.469398 NM_207362 ENSG00000196872 KIAA1211L C2orf55 KIAA1211 like protein-coding 156.461-3 chr8 70241184 70241487 + 0.769231 NA intron (NM_001321711, intron 2 of 21) intron (NM_001321711, intron 2 of 21) 162055 NM_001321712 10499 Hs.446678 NM_006540 ENSG00000140396 NCOA2 GRIP1|KAT13C|NCoA-2|SRC2|TIF2|bHLHe75 nuclear receptor coactivator 2 protein-coding 188.231 chr1 220914082 220914504 + 0.769231 NA Intergenic MIRc|SINE|MIR -34153 NR_046901 100873924 Hs.645593 NR_046901 ENSG00000257551 HLX-AS1 - HLX antisense RNA 1 ncRNA 230.462-2 chr8 108268967 108269345 + 0.769231 NA Intergenic Intergenic -20439 NM_001568 3646 Hs.405590 NM_001568 ENSG00000104408 EIF3E EIF3-P48|EIF3S6|INT6|eIF3-p46 eukaryotic translation initiation factor 3 subunit E protein-coding 159.154-7 chr8 124783497 124783703 + 0.769231 NA Intergenic MIRb|SINE|MIR -38385 NR_039806 100616221 NR_039806 ENSG00000283609 MIR4662A - microRNA 4662a ncRNA 176.615-4 chr20 7780164 7780526 + 0.769231 NA Intergenic Intergenic 160113 NM_017545 54363 Hs.193640 NM_017545 ENSG00000101323 HAO1 GOX|GOX1|HAOX1 hydroxyacid oxidase 1 protein-coding 173.538-10 chr8 117231706 117232140 + 0.769231 NA Intergenic Intergenic 96928 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 160.385 chr1 162262489 162262736 + 0.769231 NA intron (NM_014697, intron 2 of 9) intron (NM_014697, intron 2 of 9) -79934 NR_030283 693141 NR_030283 ENSG00000207729 MIR556 MIRN556|hsa-mir-556|mir-556 microRNA 556 ncRNA 183.154 chr1 222444786 222445217 + 0.769231 NA Intergenic Intergenic 103103 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding 159-6 chr7 26670383 26670829 + 0.769231 NA intron (NM_003930, intron 11 of 12) intron (NM_003930, intron 11 of 12) 32735 NR_161201 285941 Hs.413394 NR_161201 C7orf71 - chromosome 7 open reading frame 71 ncRNA 171.462-6 chr9 27817178 27817620 + 0.769231 NA Intergenic Intergenic -243533 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 237.692-2 chr9 31794418 31794911 + 0.769231 NA Intergenic Tigger18a|DNA|TcMar-Tigger -413174 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 183.615-8 chr6 54596476 54596953 + 0.769231 NA Intergenic MLT1D|LTR|ERVL-MaLR -250057 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding 198.231-3 chr4 59409153 59409473 + 0.769231 NA Intergenic Intergenic 395740 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 175.538-5 chr7 12376083 12376692 + 0.769231 NA intron (NM_001135924, intron 7 of 28) intron (NM_001135924, intron 7 of 28) 27478 NM_001135924 221806 Hs.669526 NM_001135924 ENSG00000146530 VWDE - von Willebrand factor D and EGF domains protein-coding 265.077 chr6 64319987 64320548 + 0.769231 NA intron (NM_001292009, intron 29 of 43) L1M4a1|LINE|L1 513431 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA 193.077-4 chr8 108013201 108013505 + 0.769231 NA intron (NM_178565, intron 2 of 5) intron (NM_178565, intron 2 of 5) 68586 NM_001317942 340419 Hs.444834 NM_178565 ENSG00000147655 RSPO2 CRISTIN2|HHRRD|TETAMS2 R-spondin 2 protein-coding 185.615-4 chr5 32582146 32582504 + 0.769231 NA Intergenic AluSc|SINE|Alu -3232 NM_006713 10923 Hs.229641 NM_006713 ENSG00000113387 SUB1 P15|PC4|p14 SUB1 regulator of transcription protein-coding 160.539 chr18 1024060 1024360 + 0.769231 NA Intergenic MER115|DNA|hAT-Tip100 -96217 NR_146724 388456 Hs.407666 NR_146724 ENSG00000259837 LINC01904 - long intergenic non-protein coding RNA 1904 ncRNA 160-7 chr6 156241038 156241396 + 0.769231 NA Intergenic MLT1B|LTR|ERVL-MaLR -137533 NR_145751 109617011 NR_145751 ENSG00000212295 SNORD28B - small nucleolar RNA, C/D box 28B snoRNA 156-8 chr17 32800461 32800785 + 0.769231 NA intron (NM_015194, intron 1 of 21) L1MA7|LINE|L1 76501 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding 212.308-3 chr7 16645818 16646108 + 0.769231 NA promoter-TSS (NM_001159767) promoter-TSS (NM_001159767) -171 NM_001159767 28969 Hs.487635 NM_014038 ENSG00000136261 BZW2 HSPC028|MST017|MSTP017 basic leucine zipper and W2 domains 2 protein-coding 179.385-2 chr6 88927043 88927349 + 0.769231 NA intron (NM_001286428, intron 3 of 13) intron (NM_001286428, intron 3 of 13) 36422 NM_001286428 8732 Hs.567378 NM_003800 ENSG00000111880 RNGTT CAP1A|HCE|HCE1|hCAP RNA guanylyltransferase and 5'-phosphatase protein-coding 265.923-2 chr14 28458140 28458859 + 0.769231 NA Intergenic Intergenic 306820 NR_125758 103695363 Hs.569360 NR_125758 FOXG1-AS1 FOXG1-AS FOXG1 antisense RNA 1 ncRNA 174.615-11 chr8 136085873 136086264 + 0.769231 NA Intergenic L1MA10|LINE|L1 -444730 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 209.692 chr21 27205583 27205961 + 0.769231 NA Intergenic Intergenic -238684 NM_007038 11096 Hs.58324 NM_007038 ENSG00000154736 ADAMTS5 ADAM-TS 11|ADAM-TS 5|ADAM-TS5|ADAMTS-11|ADAMTS-5|ADAMTS11|ADMP-2 ADAM metallopeptidase with thrombospondin type 1 motif 5 protein-coding 163.461-3 chr21 30493896 30494290 + 0.769231 NA Intergenic L1ME3|LINE|L1 -2080 NM_181609 337970 Hs.60480 NM_181609 ENSG00000244025 KRTAP19-3 GTRHP|KAP19.3 keratin associated protein 19-3 protein-coding 230.539 chr2 102468982 102469523 + 0.769231 NA Intergenic L1M4b|LINE|L1 -3974 NM_001011552 389015 Hs.447686 NM_001011552 ENSG00000180251 SLC9A4 NHE4 solute carrier family 9 member A4 protein-coding 164.231-4 chr16 52839069 52839454 + 0.769231 NA Intergenic Intergenic 213612 NR_136518 105371267 Hs.147562 NR_136518 ENSG00000277639 LOC105371267 PR-lncRNA-1 p53-regulated lncRNA 1 ncRNA 167.231-4 chr18 1969578 1970002 + 0.769231 NA Intergenic MIRc|SINE|MIR 601715 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 174.154-5 chr10 83583446 83583779 + 0.769231 NA Intergenic (TATGTA)n|Simple_repeat|Simple_repeat 93477 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 192.923-2 chr16 71256185 71256531 + 0.769231 NA Intergenic Intergenic -25636 NM_001198543 54768 Hs.351914 NM_017558 ENSG00000157423 HYDIN CILD5|HYDIN1|HYDIN2|PPP1R31 HYDIN axonemal central pair apparatus protein protein-coding 151.692-4 chr2 57250132 57250358 + 0.769231 NA Intergenic THE1D-int|LTR|ERVL-MaLR -657406 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 151.923-2 chr1 69981007 69981360 + 0.769231 NA intron (NM_001370785, intron 9 of 26) intron (NM_001370785, intron 9 of 26) 61861 NR_023916 5301 Hs.654711 NR_023916 ENSG00000229359 PIN1P1 PIN1L peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1 pseudo 178.462-5 chr8 119081861 119082205 + 0.769231 NA intron (NM_006438, intron 1 of 5) intron (NM_006438, intron 1 of 5) -13251 NR_134297 101927513 Hs.676598 NR_134297 ENSG00000254278 LOC101927513 - uncharacterized LOC101927513 ncRNA 200.231-2 chr14 69239146 69239564 + 0.769231 NA intron (NM_001193360, intron 9 of 9) intron (NM_001193360, intron 9 of 9) -20803 NM_020692 57452 Hs.21035 NM_020692 ENSG00000100626 GALNT16 GALNACT16|GALNTL1|GalNAc-T16 polypeptide N-acetylgalactosaminyltransferase 16 protein-coding 154.461-4 chr14 98092990 98093367 + 0.769231 NA Intergenic Intergenic -115054 NR_015430 388011 Hs.651477 NR_015430 ENSG00000246223 LINC01550 C14orf64 long intergenic non-protein coding RNA 1550 ncRNA 168.308-8 chr6 139329807 139330093 + 0.769231 NA Intergenic Intergenic -37952 NM_153235 167838 Hs.535820 NM_153235 ENSG00000164440 TXLNB C6orf198|LST001|MDP77|dJ522B19.2 taxilin beta protein-coding 181.539-4 chr6 45526853 45527297 + 0.769231 NA intron (NM_001015051, intron 7 of 7) L2c|LINE|L2 104800 NM_001369405 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding 207.615 chr21 25312619 25313258 + 0.769231 NA Intergenic MIR3|SINE|MIR 118763 NR_024027 54072 Hs.234016 NM_058184 ENSG00000185433 LINC00158 C21orf42|NCRNA00158 long intergenic non-protein coding RNA 158 ncRNA 154.154-3 chr10 11172352 11172612 + 0.769231 NA intron (NM_001326339, intron 2 of 11) intron (NM_001326339, intron 2 of 11) 7452 NM_001025076 10659 Hs.309288 NM_006561 ENSG00000048740 CELF2 BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR CUGBP Elav-like family member 2 protein-coding 157.846-5 chr11 46110290 46110505 + 0.769231 NA intron (NR_147890, intron 1 of 18) intron (NR_147890, intron 1 of 18) 10422 NM_001352029 51317 Hs.502458 NM_016621 ENSG00000135365 PHF21A BHC80|BM-006 PHD finger protein 21A protein-coding 191.538 chr12 60245571 60245872 + 0.769231 NA Intergenic Intergenic 556351 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 206.923-4 chr7 6186334 6186896 + 0.769231 NA intron (NM_001367581, intron 4 of 13) intron (NM_001367581, intron 4 of 13) -14478 NM_001367582 9265 Hs.487479 NM_004227 ENSG00000008256 CYTH3 ARNO3|GRP1|PSCD3|cytohesin-3 cytohesin 3 protein-coding 199.231 chr1 49021454 49021755 + 0.769231 NA intron (NM_001323575, intron 5 of 12) MLT1A0|LTR|ERVL-MaLR -235807 NR_125988 101929721 Hs.639985 NR_125988 ENSG00000230114 LOC101929721 - uncharacterized LOC101929721 ncRNA 172.385-4 chr2 77938567 77938935 + 0.769231 NA intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) 16275 NR_024342 100170221 Hs.717311 NR_024342 SNAR-H snaR-2 small NF90 (ILF3) associated RNA H snRNA 160.231-3 chr5 144999757 145000016 + 0.769231 NA Intergenic Intergenic 794495 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding 172.769-3 chr17 28149340 28149714 + 0.769231 NA intron (NM_016231, intron 3 of 10) intron (NM_016231, intron 3 of 10) -77036 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo 171.385-3 chr15 62054686 62055186 + 0.769231 NA intron (NM_001018088, intron 1 of 81) MIR|SINE|MIR 5511 NM_017684 54832 Hs.511668 NM_017684 ENSG00000129003 VPS13C PARK23 vacuolar protein sorting 13 homolog C protein-coding 331.538 chr4 135592211 135592782 + 0.769231 NA Intergenic Intergenic 295597 NR_103762 100507528 Hs.518987 NR_103762 ENSG00000248330 LINC00613 - long intergenic non-protein coding RNA 613 ncRNA 188.154 chr11 63300676 63300985 + 0.769231 NA intron (NM_001039752, intron 6 of 9) intron (NM_001039752, intron 6 of 9) 10927 NR_134874 387775 Hs.188982 NM_001039752 ENSG00000184999 SLC22A10 OAT5|hOAT5 solute carrier family 22 member 10 protein-coding 173.231-7 chr8 133965540 133965919 + 0.769231 NA Intergenic Intergenic 79233 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 216.461-2 chr6 88452799 88453354 + 0.769231 NA Intergenic L1ME3Cz|LINE|L1 86293 NR_110867 101928936 Hs.533080 NR_110867 LOC101928936 - uncharacterized LOC101928936 ncRNA 213.154 chr8 126246084 126246461 + 0.769231 NA Intergenic L1MD3|LINE|L1 -79223 NR_125421 101927657 Hs.552133 NR_125421 ENSG00000244791 LOC101927657 - uncharacterized LOC101927657 ncRNA 168.462-4 chr22 25905034 25905353 + 0.769231 NA intron (NM_001318245, intron 31 of 43) intron (NM_001318245, intron 31 of 43) 163005 NM_001318245 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 219.923 chr14 71238867 71239289 + 0.769231 NA Intergenic L1MB3|LINE|L1 -81398 NM_001284245 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 238 chr14 50598071 50598485 + 0.769231 NA intron (NM_015915, intron 6 of 13) L1M5|LINE|L1 38253 NM_015915 51062 Hs.584905 NM_015915 ENSG00000198513 ATL1 AD-FSP|FSP1|GBP3|HSN1D|SPG3|SPG3A|atlastin1 atlastin GTPase 1 protein-coding 188-2 chr4 99266224 99266620 + 0.769231 NA intron (NR_037884, intron 4 of 9) intron (NR_037884, intron 4 of 9) 24563 NM_000667 124 Hs.654433 NM_000667 ENSG00000187758 ADH1A ADH1 alcohol dehydrogenase 1A (class I), alpha polypeptide protein-coding 173 chr14 62028357 62028947 + 0.769231 NA intron (NM_001367661, intron 4 of 8) intron (NM_001367661, intron 4 of 8) -88705 NR_015358 646113 Hs.445241 NM_001039785 LINC00643 - long intergenic non-protein coding RNA 643 ncRNA 156.462-2 chr10 57234203 57234624 + 0.769231 NA Intergenic Intergenic 70146 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 157.308-6 chr20 52126018 52126266 + 0.769231 NA intron (NM_199427, intron 5 of 8) AluSx1|SINE|Alu -20658 NM_001319146 55734 Hs.473082 NM_018197 ENSG00000020256 ZFP64 ZNF338 ZFP64 zinc finger protein protein-coding 202.615-6 chr9 80910341 80910654 + 0.769231 NA Intergenic Intergenic 779038 NM_001303103 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding 160.769-6 chr18 4244091 4244398 + 0.769231 NA intron (NM_001242761, intron 1 of 11) intron (NM_001242761, intron 1 of 11) -20358 NR_036489 284215 Hs.647594 NR_036489 ENSG00000261520 DLGAP1-AS5 - DLGAP1 antisense RNA 5 ncRNA 247.231 chr11 112862905 112863364 + 0.769231 NA Intergenic MIRb|SINE|MIR -98286 NM_001242608 4684 Hs.503878 NM_000615 ENSG00000149294 NCAM1 CD56|MSK39|NCAM neural cell adhesion molecule 1 protein-coding 155.385-15 chr9 11460722 11461003 + 0.769231 NA Intergenic Intergenic 847656 NR_110696 101929428 Hs.434446 NR_110696 ENSG00000226717 PTPRD-AS2 - PTPRD antisense RNA 2 (head to head) ncRNA 151.846-7 chr4 73586377 73586711 + 0.769231 NA intron (NM_001270391, intron 5 of 9) intron (NM_001270391, intron 5 of 9) 33892 NM_001270391 166824 Hs.529677 NM_177532 ENSG00000169435 RASSF6 - Ras association domain family member 6 protein-coding 210-4 chr9 25136298 25136736 + 0.769231 NA Intergenic Intergenic 542341 NM_001004125 286319 Hs.26268 NM_001004125 ENSG00000198680 TUSC1 CCDC89B|TSG-9|TSG9 tumor suppressor candidate 1 protein-coding 215.615-3 chr13 80586791 80587139 + 0.769231 NA Intergenic Intergenic -245839 NM_005842 10253 Hs.18676 NM_005842 ENSG00000136158 SPRY2 IGAN3|hSPRY2 sprouty RTK signaling antagonist 2 protein-coding 192.308-3 chr2 45596474 45596961 + 0.769231 NA intron (NM_018079, intron 4 of 20) MIR|SINE|MIR 14550 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding 161.154-10 chrX 67872279 67872510 + 0.769231 NA Intergenic L1PA5|LINE|L1 327771 NM_001011645 367 Hs.76704 NM_000044 ENSG00000169083 AR AIS|AR8|DHTR|HUMARA|HYSP1|KD|NR3C4|SBMA|SMAX1|TFM androgen receptor protein-coding 182-4 chr6 127278696 127279163 + 0.769231 NA intron (NM_001242852, intron 1 of 4) L1MB4|LINE|L1 12091 NM_001242846 81847 Hs.267120 NM_030963 ENSG00000118518 RNF146 - ring finger protein 146 protein-coding 241.539 chr4 37620175 37620565 + 0.769231 NA intron (NM_001085400, intron 6 of 6) intron (NM_001085400, intron 6 of 6) 36137 NM_018302 55286 Hs.107527 NM_018302 ENSG00000154274 C4orf19 - chromosome 4 open reading frame 19 protein-coding 172 chr14 19923811 19924261 + 0.769231 NA Intergenic Charlie24|DNA|hAT-Charlie 3429 NM_001005483 79317 Hs.554585 NM_001005483 ENSG00000176281 OR4K5 OR14-16 olfactory receptor family 4 subfamily K member 5 protein-coding 184.923-3 chr16 9998141 9998407 + 0.769231 NA intron (NM_001134408, intron 2 of 13) L1MB5|LINE|L1 183793 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding 171.462-3 chr14 66600079 66600678 + 0.769231 NA intron (NM_001024218, intron 1 of 21) MIR|SINE|MIR 92971 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 172.615 chr10 95745089 95745661 + 0.769231 NA intron (NM_001098175, intron 1 of 9) AluJr|SINE|Alu -10277 NM_001320916 953 Hs.576612 NM_001776 ENSG00000138185 ENTPD1 ATPDase|CD39|NTPDase-1|SPG64 ectonucleoside triphosphate diphosphohydrolase 1 protein-coding 173.846-5 chr3 15415157 15415573 + 0.769231 NA intron (NM_001330662, intron 5 of 5) AluSz6|SINE|Alu 12179 NM_001330662 131965 Hs.149487 NM_152396 ENSG00000206562 METTL6 - methyltransferase like 6 protein-coding 155.615-3 chr15 43095599 43095973 + 0.769231 NA intron (NM_174916, intron 1 of 46) intron (NM_174916, intron 1 of 46) 10252 NM_174916 197131 Hs.591121 NM_174916 ENSG00000159459 UBR1 JBS ubiquitin protein ligase E3 component n-recognin 1 protein-coding 162-6 chr2 67997051 67997278 + 0.769231 NA Intergenic Intergenic 65840 NM_001190265 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding 257.692 chr2 60512620 60513168 + 0.769231 NA intron (NM_138559, intron 2 of 4) intron (NM_138559, intron 2 of 4) 40604 NM_001363864 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding 343.385 chr10 106597500 106598107 + 0.769231 NA intron (NM_001206569, intron 23 of 25) intron (NM_001206569, intron 23 of 25) 457638 NR_134330 105378470 Hs.142910 NR_134329 ENSG00000229775 LINC02624 - long intergenic non-protein coding RNA 2624 ncRNA 222.462 chr16 49251153 49251584 + 0.692308 NA Intergenic MLT1C|LTR|ERVL-MaLR 30470 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding 151.615-7 chr3 735299 735699 + 0.692308 NA intron (NR_110118, intron 1 of 3) MLT1I|LTR|ERVL-MaLR 143394 NR_110118 101927215 Hs.650700 NR_110118 ENSG00000224957 LINC01266 - long intergenic non-protein coding RNA 1266 ncRNA 175.923 chr11 115346726 115347206 + 0.692308 NA intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) 13389 NR_135108 105369509 Hs.736064 NR_135108 LOC105369509 - uncharacterized LOC105369509 ncRNA 152.308-8 chr5 22583533 22583808 + 0.692308 NA intron (NM_004061, intron 1 of 14) L3|LINE|CR1 269674 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 159.231-2 chr14 30765928 30766320 + 0.692308 NA Intergenic L1ME1|LINE|L1 -108411 NM_001135058 1690 Hs.21016 NM_004086 ENSG00000100473 COCH COCH-5B2|COCH5B2|DFNA9|DFNB110 cochlin protein-coding 173.538-5 chr18 2797136 2797478 + 0.692308 NA intron (NM_015295, intron 47 of 47) intron (NM_015295, intron 47 of 47) -49699 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding 173.308-7 chr9 94109583 94109957 + 0.692308 NA TTS (NM_001253830) TTS (NM_001253830) 25306 NM_001253829 138639 Hs.437943 NM_152422 ENSG00000158079 PTPDC1 PTP9Q22 protein tyrosine phosphatase domain containing 1 protein-coding 179.077 chr1 98132369 98132706 + 0.692308 NA Intergenic L3|LINE|CR1 -78174 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA 178.769-4 chr14 38823623 38823928 + 0.692308 NA intron (NR_039982, intron 4 of 4) MER33|DNA|hAT-Charlie -58821 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA 186.385-2 chr1 170395719 170396101 + 0.692308 NA Intergenic Intergenic -111702 NR_026957 284688 Hs.135668 NR_026957 ENSG00000224286 LINC01142 - long intergenic non-protein coding RNA 1142 ncRNA 208-2 chr14 58901177 58901611 + 0.692308 NA intron (NR_110547, intron 2 of 5) L2|LINE|L2 73106 NR_110547 102723742 Hs.232734 NR_110547 ENSG00000258583 LINC01500 - long intergenic non-protein coding RNA 1500 ncRNA 188.231-4 chr14 46277185 46277787 + 0.692308 NA intron (NR_102702, intron 3 of 3) intron (NR_102702, intron 3 of 3) -193873 NR_102699 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 157.154 chr11 40163544 40163916 + 0.692308 NA intron (NM_020929, intron 3 of 4) intron (NM_020929, intron 3 of 4) 129400 NR_047673 57689 Hs.745123 NM_020929 ENSG00000148948 LRRC4C NGL-1|NGL1 leucine rich repeat containing 4C protein-coding 151.615-11 chr5 153983949 153984312 + 0.692308 NA Intergenic MIRb|SINE|MIR 54780 NM_018691 10827 Hs.166551 NM_018691 ENSG00000055147 FAM114A2 133K02|C5orf3 family with sequence similarity 114 member A2 protein-coding 209.692-2 chr3 3687900 3688218 + 0.692308 NA Intergenic MER4D1|LTR|ERV1 -111372 NM_020873 57633 Hs.163244 NM_020873 ENSG00000175928 LRRN1 FIGLER3|NLRR-1 leucine rich repeat neuronal 1 protein-coding 188.231-6 chr2 206903194 206903512 + 0.692308 NA Intergenic L1MA3|LINE|L1 -36165 NM_173077 130749 Hs.684103 NM_173077 ENSG00000144410 CPO - carboxypeptidase O protein-coding 195.846-4 chr8 88332824 88333184 + 0.692308 NA Intergenic Intergenic -5521 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 199.769-3 chr12 21176184 21176552 + 0.692308 NA intron (NM_006446, intron 4 of 14) intron (NM_006446, intron 4 of 14) 45174 NM_006446 10599 Hs.449738 NM_006446 ENSG00000134538 SLCO1B1 HBLRR|LST-1|LST1|OATP-C|OATP1B1|OATP2|OATPC|SLC21A6 solute carrier organic anion transporter family member 1B1 protein-coding 228.846-2 chr14 68389560 68390019 + 0.692308 NA intron (NM_133509, intron 8 of 10) intron (NM_133509, intron 8 of 10) 238998 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 152.077-10 chr5 82589788 82590160 + 0.692308 NA Intergenic L1MD3|LINE|L1 -250181 NR_039773 100616297 NR_039773 ENSG00000283359 MIR3977 - microRNA 3977 ncRNA 176.538-2 chr17 80767191 80767720 + 0.692308 NA intron (NM_020761, intron 6 of 33) L1M5|LINE|L1 38177 NR_110852 101928855 Hs.670692 NR_110852 ENSG00000262833 LOC101928855 - uncharacterized LOC101928855 ncRNA 166.154-6 chr22 46402605 46402966 + 0.692308 NA intron (NM_014246, intron 9 of 34) intron (NM_014246, intron 9 of 34) 67071 NM_001282783 55687 Hs.439524 NM_018006 ENSG00000100416 TRMU LCAL3|MTO2|MTU1|TRMT|TRMT1 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding 160.539-2 chr5 33965904 33966308 + 0.692308 NA intron (NM_001012509, intron 2 of 5) intron (NM_001012509, intron 2 of 5) 18587 NM_016180 51151 Hs.278962 NM_016180 ENSG00000164175 SLC45A2 1A1|AIM1|MATP|OCA4|SHEP5 solute carrier family 45 member 2 protein-coding 162.077-6 chr3 99469647 99469987 + 0.692308 NA Intergenic Intergenic -168777 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding 170.308-6 chr6 36467926 36468215 + 0.692308 NA intron (NR_104481, intron 1 of 3) L1ME3G|LINE|L1 25070 NM_001286579 222658 Hs.188757 NM_173562 ENSG00000112078 KCTD20 C6orf69|dJ108K11.3 potassium channel tetramerization domain containing 20 protein-coding 182.462-3 chr3 90282044 90282387 + 0.692308 NA Intergenic ALR/Alpha|Satellite|centr 1174594 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 159.692-3 chr13 53558271 53558646 + 0.692308 NA Intergenic Intergenic -256961 NR_047488 100861552 Hs.224691 NR_047488 ENSG00000261517 LINC00558 - long intergenic non-protein coding RNA 558 ncRNA 183.846-2 chr4 58601851 58602455 + 0.692308 NA Intergenic Intergenic -65825 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA 250.077 chr5 107123083 107123651 + 0.692308 NA Intergenic Intergenic -112353 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 161.769-5 chr4 102407903 102408206 + 0.692308 NA Intergenic L1PB2|LINE|L1 -62572 NM_001135146 64116 Hs.288034 NM_022154 ENSG00000138821 SLC39A8 BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 solute carrier family 39 member 8 protein-coding 217-3 chr6 84979434 84980069 + 0.692308 NA Intergenic Intergenic -215153 NM_001080508 9096 Hs.251830 NM_001080508 ENSG00000112837 TBX18 CAKUT2 T-box transcription factor 18 protein-coding 161.308-5 chr17 16105760 16106017 + 0.692308 NA intron (NM_001190440, intron 18 of 44) AluSq|SINE|Alu 47308 NR_145787 109623477 NR_145787 SNORD163 - small nucleolar RNA, C/D box 163 snoRNA 197 chr2 50928982 50929366 + 0.692308 NA intron (NM_004801, intron 2 of 21) intron (NM_004801, intron 2 of 21) 102958 NM_001330078 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 194.154-3 chr14 45539220 45539700 + 0.692308 NA Intergenic L1MA3|LINE|L1 176142 NR_146546 105370479 NR_146546 ENSG00000258616 LINC02303 - long intergenic non-protein coding RNA 2303 ncRNA 195.539-2 chr5 51734098 51734443 + 0.692308 NA Intergenic (CATT)n|Simple_repeat|Simple_repeat -273761 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA 159.923-5 chr17 60300386 60300828 + 0.692308 NA intron (NM_032582, intron 3 of 33) intron (NM_032582, intron 3 of 33) -68962 NR_002999 677681 NR_002999 ENSG00000252577 SCARNA20 ACA66 small Cajal body-specific RNA 20 ncRNA 168.231-2 chr6 140304086 140304529 + 0.692308 NA Intergenic Intergenic 99055 NR_037441 100500879 NR_037441 ENSG00000263514 MIR3668 - microRNA 3668 ncRNA 152.385 chr1 239179885 239180270 + 0.692308 NA Intergenic ERV24B_Prim-int|LTR|ERV1 -206491 NM_001347716 1131 Hs.7138 NM_000740 ENSG00000133019 CHRM3 EGBRS|HM3|PBS cholinergic receptor muscarinic 3 protein-coding 156.462-3 chr11 14971681 14971955 + 0.692308 NA intron (NR_125898, intron 1 of 5) intron (NR_125898, intron 1 of 5) 468 NM_001033952 796 Hs.37058 NM_001741 ENSG00000110680 CALCA CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT calcitonin related polypeptide alpha protein-coding 169-4 chr15 66513756 66514203 + 0.692308 NA intron (NM_001287822, intron 2 of 17) intron (NM_001287822, intron 2 of 17) 8653 NM_001287821 55055 Hs.21331 NM_017975 ENSG00000174442 ZWILCH KNTC1AP|hZwilch zwilch kinetochore protein protein-coding 201.462 chr2 95409172 95409823 + 0.692308 NA intron (NM_016044, intron 3 of 7) AluSx|SINE|Alu 6789 NM_016044 51011 Hs.531247 NM_016044 ENSG00000115042 FAHD2A CGI-105 fumarylacetoacetate hydrolase domain containing 2A protein-coding 155.538-12 chr5 65874405 65874706 + 0.692308 NA Intergenic L1M5|LINE|L1 -51999 NM_001006600 55914 Hs.591774 NM_018695 ENSG00000112851 ERBIN ERBB2IP|HEL-S-78|LAP2 erbb2 interacting protein protein-coding 176.154-9 chrX 64645352 64645729 + 0.692308 NA Intergenic L1MA9|LINE|L1 -250088 NM_017677 55613 Hs.442892 NM_017677 ENSG00000102043 MTMR8 - myotubularin related protein 8 protein-coding 196.385-2 chr2 112240017 112240389 + 0.692308 NA intron (NM_032494, intron 2 of 8) intron (NM_032494, intron 2 of 8) 14839 NM_032494 84524 Hs.418416 NM_032494 ENSG00000144161 ZC3H8 Fliz1|ZC3HDC8 zinc finger CCCH-type containing 8 protein-coding 179.846-5 chr7 93971169 93971558 + 0.692308 NA intron (NR_133909, intron 4 of 4) intron (NR_133909, intron 4 of 4) 32992 NR_133908 10282 Hs.489132 NM_005868 ENSG00000105829 BET1 HBET1 Bet1 golgi vesicular membrane trafficking protein protein-coding 205.923 chr1 117254934 117255254 + 0.692308 NA Intergenic Intergenic -40372 NR_126408 104355292 Hs.576446 NR_126408 ENSG00000235202 LINC01525 lnc-MAN1A2-1 long intergenic non-protein coding RNA 1525 ncRNA 154.615-16 chrX 70278912 70279385 + 0.692308 NA intron (NM_004312, intron 12 of 16) intron (NM_004312, intron 12 of 16) -3024 NM_001363807 347517 Hs.276327 NM_001032726 ENSG00000147127 RAB41 - RAB41, member RAS oncogene family protein-coding 176.385 chr20 39503859 39504557 + 0.692308 NA Intergenic Intergenic -279460 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 199.385-2 chr14 64126497 64126874 + 0.692308 NA exon (NM_182914, exon 73 of 116) exon (NM_182914, exon 73 of 116) -31560 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA 183.923 chr12 62958846 62959142 + 0.692308 NA Intergenic LTR78|LTR|ERV1 -23844 NM_020700 57460 Hs.435479 NM_020700 ENSG00000111110 PPM1H ARHCL1|NERPP-2C|URCC2 protein phosphatase, Mg2+/Mn2+ dependent 1H protein-coding 163.077-5 chr4 80881066 80881611 + 0.692308 NA intron (NM_152770, intron 4 of 5) intron (NM_152770, intron 4 of 5) -149370 NM_001201 651 Hs.387411 NM_001201 ENSG00000152785 BMP3 BMP-3A bone morphogenetic protein 3 protein-coding 180.231 chr1 200545933 200546363 + 0.692308 NA Intergenic AluSz|SINE|Alu 72690 NM_001305792 9928 Hs.3104 NM_014875 ENSG00000118193 KIF14 MCPH20|MKS12 kinesin family member 14 protein-coding 178.231 chr1 211397688 211398040 + 0.692308 NA intron (NR_026761, intron 4 of 5) L1MA3|LINE|L1 15109 NR_026761 84791 Hs.523932 NM_032705 LINC00467 C1orf97 long intergenic non-protein coding RNA 467 ncRNA 164.538-2 chr1 242824447 242824993 + 0.692308 NA Intergenic Intergenic 277024 NR_029401 731275 Hs.722350 NR_029401 ENSG00000214837 LINC01347 - long intergenic non-protein coding RNA 1347 ncRNA 160-4 chr14 62413174 62413518 + 0.692308 NA Intergenic Intergenic -273373 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 199.154-3 chr4 66657745 66658044 + 0.692308 NA Intergenic Intergenic 381070 NR_031673 100302177 NR_031673 ENSG00000221563 MIR1269A MIR1269|MIRN1269|hsa-mir-1269|hsa-mir-1269a microRNA 1269a ncRNA 174.615-4 chr12 25009340 25009593 + 0.692308 NA intron (NM_001321724, intron 3 of 17) intron (NM_001321724, intron 3 of 17) 11891 NM_001321724 645177 Hs.569157 NM_001321724 LOC645177 - uncharacterized LOC645177 protein-coding 159.923-3 chr1 238328373 238328715 + 0.692308 NA Intergenic Intergenic 157473 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 196.769-2 chr4 121139599 121140117 + 0.692308 NA intron (NM_024873, intron 9 of 10) intron (NM_024873, intron 9 of 10) 24463 NM_024873 79931 Hs.208206 NM_024873 ENSG00000050730 TNIP3 ABIN-3|LIND TNFAIP3 interacting protein 3 protein-coding 158.154 chr10 113921019 113921423 + 0.692308 NA Intergenic Intergenic 66560 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding 216.846 chr10 92900770 92901705 + 0.692308 NA intron (NM_001319195, intron 5 of 21) L1MC4|LINE|L1 52717 NM_001319195 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding 173.769-3 chr14 67518088 67518464 + 0.692308 NA intron (NM_001348546, intron 1 of 2) MIRb|SINE|MIR -2791 NM_001348548 161145 Hs.509707 NM_182526 ENSG00000198133 TMEM229B C14orf83 transmembrane protein 229B protein-coding 155.308-6 chr4 182754903 182755137 + 0.692308 NA exon (NM_001080477, exon 22 of 28) exon (NM_001080477, exon 22 of 28) 162233 NM_001351745 1635 Hs.183850 NM_001921 ENSG00000129187 DCTD - dCMP deaminase protein-coding 182.539 chr13 105752651 105753070 + 0.692308 NA intron (NR_046391, intron 3 of 3) Tigger2|DNA|TcMar-Tigger 46030 NR_120418 144920 Hs.567700 NR_046391 LINC00343 LINC00344|NCRNA00343|NCRNA00344 long intergenic non-protein coding RNA 343 ncRNA 171.154-9 chr8 65469281 65469868 + 0.692308 NA Intergenic MIR|SINE|MIR 93092 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA 162.923-6 chr4 105514918 105515164 + 0.692308 NA Intergenic L1PB1|LINE|L1 -37579 NM_001242729 54848 Hs.585224 NM_017700 ENSG00000236699 ARHGEF38 - Rho guanine nucleotide exchange factor 38 protein-coding 169-8 chr4 180862604 180862940 + 0.692308 NA Intergenic MER3|DNA|hAT-Charlie 296377 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA 209.538-3 chr14 50697867 50698221 + 0.692308 NA Intergenic L1PA14|LINE|L1 -29738 NM_021818 60485 Hs.642842 NM_021818 ENSG00000151748 SAV1 SAV|WW45|WWP4 salvador family WW domain containing protein 1 protein-coding 168.769-5 chr16 6091864 6092181 + 0.692308 NA intron (NM_018723, intron 1 of 15) intron (NM_018723, intron 1 of 15) 72319 NM_001308117 54715 Hs.459842 NM_018723 ENSG00000078328 RBFOX1 2BP1|A2BP1|FOX-1|FOX1|HRNBP1 RNA binding fox-1 homolog 1 protein-coding 184-3 chr4 33875615 33876051 + 0.692308 NA Intergenic L1PA13|LINE|L1 164060 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 158.308-14 chr7 11108492 11108841 + 0.692308 NA non-coding (NR_033435, exon 16 of 16) non-coding (NR_033435, exon 16 of 16) 134794 NR_033435 9678 Hs.655688 NM_014660 ENSG00000106443 PHF14 - PHD finger protein 14 protein-coding 169.615-9 chr5 98887938 98888452 + 0.692308 NA exon (NM_001270, exon 16 of 35) exon (NM_001270, exon 16 of 35) 38339 NM_001270 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding 182.615-4 chr3 120913344 120913927 + 0.692308 NA intron (NR_145517, intron 2 of 8) Tigger13a|DNA|TcMar-Tigger 4958 NM_001348344 9515 Hs.477315 NM_014980 ENSG00000145087 STXBP5L LLGL4 syntaxin binding protein 5 like protein-coding 156.923-7 chr2 32020963 32021295 + 0.692308 NA intron (NM_001321210, intron 5 of 5) AluSx3|SINE|Alu -10121 NR_126034 51072 Hs.444969 NM_015955 ENSG00000162959 MEMO1 C2orf4|CGI-27|MEMO|NS5ATP7 mediator of cell motility 1 protein-coding 169.615-8 chr5 87971462 87971867 + 0.692308 NA Intergenic L1ME3A|LINE|L1 297181 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding 163.846-8 chr2 52980152 52980472 + 0.692308 NA Intergenic Intergenic -277697 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 179.539-3 chrX 80915771 80916298 + 0.692308 NA Intergenic L1MA9|LINE|L1 -106157 NM_153252 254065 Hs.147027 NM_153252 ENSG00000165288 BRWD3 BRODL|MRX93 bromodomain and WD repeat domain containing 3 protein-coding 158.077 chr11 78212126 78212557 + 0.692308 NA intron (NM_020798, intron 10 of 10) L1PA11|LINE|L1 23422 NM_020798 57558 Hs.531249 NM_020798 ENSG00000118369 USP35 - ubiquitin specific peptidase 35 protein-coding 217.846-2 chr3 63545906 63546273 + 0.692308 NA intron (NM_001130003, intron 3 of 5) intron (NM_001130003, intron 3 of 5) 3962 NR_046677 100874016 Hs.441275 NR_046677 ENSG00000241359 SYNPR-AS1 - SYNPR antisense RNA 1 ncRNA 174.154-4 chr10 60377557 60378188 + 0.692308 NA intron (NM_001204403, intron 2 of 43) MIRb|SINE|MIR 12003 NM_001320874 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding 162.538-2 chr17 78830289 78830692 + 0.692308 NA intron (NM_001321291, intron 4 of 20) L1ME3Cz|LINE|L1 10037 NM_001321291 57602 Hs.464243 NM_025090 ENSG00000055483 USP36 DUB1 ubiquitin specific peptidase 36 protein-coding 177.385 chr1 178177810 178178337 + 0.692308 NA intron (NM_170692, intron 1 of 17) intron (NM_170692, intron 1 of 17) 83969 NM_170692 9462 Hs.496139 NM_004841 ENSG00000075391 RASAL2 NGAP RAS protein activator like 2 protein-coding 228.461 chr7 10764017 10764714 + 0.692308 NA intron (NR_147499, intron 1 of 2) intron (NR_147499, intron 1 of 2) 15579 NR_147499 79150 Hs.571301 NM_024304 ENSG00000283117 MGC4859 - uncharacterized LOC79150 ncRNA 169.692-11 chr8 127094652 127095082 + 0.692308 NA Intergenic Intergenic -12646 NR_119373 103164619 Hs.571401 NR_119373 ENSG00000254166 PCAT2 CARLO4|CARLo-4|PCA2|TCONS_00015167 prostate cancer associated transcript 2 ncRNA 196.539 chr2 7192897 7193187 + 0.692308 NA Intergenic L1MC3|LINE|L1 -115162 NR_110252 101929452 NR_110252 ENSG00000223884 LOC101929452 - uncharacterized LOC101929452 ncRNA 214.308 chr16 53653085 53653627 + 0.692308 NA intron (NM_001127897, intron 14 of 24) intron (NM_001127897, intron 14 of 24) 50503 NM_001328422 23322 Hs.298382 NM_015272 ENSG00000103494 RPGRIP1L CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 RPGRIP1 like protein-coding 264.615 chr9 95070477 95071195 + 0.692308 NA intron (NM_032823, intron 12 of 14) intron (NM_032823, intron 12 of 14) 5486 NR_106729 102466518 NR_106729 ENSG00000274115 MIR6081 hsa-mir-6081 microRNA 6081 ncRNA 162.385-7 chr8 136462327 136462661 + 0.692308 NA Intergenic L1MDa|LINE|L1 -68304 NR_147196 107986980 Hs.549694 NR_147196 ENSG00000254101 LINC02055 - long intergenic non-protein coding RNA 2055 ncRNA 177.923-3 chr6 62601678 62602325 + 0.692308 NA Intergenic Intergenic -315774 NR_146872 202559 Hs.519794 NM_152688 ENSG00000112232 KHDRBS2 SLM-1|SLM1 KH RNA binding domain containing, signal transduction associated 2 protein-coding 160.461 chr12 31724934 31725289 + 0.692308 NA intron (NR_103522, intron 1 of 8) MER110|LTR|ERV1 3910 NM_001113402 196394 Hs.585084 NM_001113402 ENSG00000151743 AMN1 - antagonist of mitotic exit network 1 homolog protein-coding 154.615-4 chr12 14564778 14565089 + 0.692308 NA intron (NM_024829, intron 1 of 10) intron (NM_024829, intron 1 of 10) -2799 NR_120465 101928290 Hs.131933 NR_120465 ENSG00000256751 PLBD1-AS1 - PLBD1 antisense RNA 1 ncRNA 154.462-3 chr8 131168334 131168742 + 0.692308 NA Intergenic Intergenic -127629 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 164.538-4 chr14 43069370 43069689 + 0.692308 NA Intergenic L1MEc|LINE|L1 1437754 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 185.615 chr1 98156187 98156672 + 0.692308 NA Intergenic L1PREC2|LINE|L1 -54282 NR_046088 729987 Hs.683961 NR_046088 ENSG00000226053 LINC01776 - long intergenic non-protein coding RNA 1776 ncRNA 166-5 chr2 96477121 96477637 + 0.692308 NA Intergenic L1M5|LINE|L1 27978 NM_001285486 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding 152.308-6 chr3 124051096 124051439 + 0.692308 NA Intergenic Intergenic -43414 NM_001322988 8997 Hs.8004 NM_003947 ENSG00000160145 KALRN ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD kalirin RhoGEF kinase protein-coding 156.308 chr12 10373435 10373799 + 0.692308 NA intron (NM_001199805, intron 12 of 12) intron (NM_001199805, intron 12 of 12) 9848 NR_120430 101928100 Hs.638425 NR_120430 ENSG00000245648 LOC101928100 - uncharacterized LOC101928100 ncRNA 182.231-3 chr3 53938259 53938582 + 0.692308 NA Intergenic MamTip2|DNA|hAT-Tip100 -46561 NM_021237 58515 Hs.58471 NM_021237 ENSG00000113811 SELENOK HSPC030|HSPC297|SELK selenoprotein K protein-coding 186.308-3 chr19 46583132 46583616 + 0.692308 NA intron (NM_001370550, intron 1 of 2) AluSx|SINE|Alu 17542 NM_001370550 100506012 Hs.671661 NM_001205281 ENSG00000230510 PPP5D1 - PPP5 tetratricopeptide repeat domain containing 1 protein-coding 196.615-2 chr10 31810536 31810952 + 0.692308 NA exon (NM_001270699, exon 12 of 16) exon (NM_001270699, exon 12 of 16) 98182 NM_001270699 94134 Hs.499264 NM_018287 ENSG00000165322 ARHGAP12 - Rho GTPase activating protein 12 protein-coding 168.077-9 chr5 18195012 18195484 + 0.692308 NA Intergenic Intergenic 387974 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 198-2 chr7 48706715 48707098 + 0.692308 NA Intergenic Intergenic -217641 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 172.385-2 chr2 7988831 7989281 + 0.692308 NA Intergenic Intergenic -12242 NR_015405 339788 Hs.46864 NR_015405 ENSG00000235665 LINC00298 - long intergenic non-protein coding RNA 298 ncRNA 152.769-5 chr20 63326527 63326758 + 0.692308 NA intron (NM_020882, intron 30 of 35) intron (NM_020882, intron 30 of 35) -33346 NR_110634 100130587 Hs.640129 NR_110634 ENSG00000203900 LOC100130587 - uncharacterized LOC100130587 ncRNA 170.154 chr2 60649945 60650192 + 0.692308 NA Intergenic Intergenic -96414 NM_138559 53335 Hs.370549 NM_018014 ENSG00000119866 BCL11A BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 BAF chromatin remodeling complex subunit BCL11A protein-coding 160.769-2 chr1 173840162 173840752 + 0.692308 NA intron (NM_001365212, intron 10 of 15) AluSx|SINE|Alu 15784 NM_001365212 55157 Hs.647707 NM_018122 ENSG00000117593 DARS2 ASPRS|LBSL|MT-ASPRS|mtAspRS aspartyl-tRNA synthetase 2, mitochondrial protein-coding 164.538-5 chr18 4415075 4415777 + 0.692308 NA intron (NM_001242761, intron 1 of 11) intron (NM_001242761, intron 1 of 11) 39840 NM_001242761 9229 Hs.594640 NM_004746 ENSG00000170579 DLGAP1 DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1 DLG associated protein 1 protein-coding 229.846-3 chr8 109332361 109332880 + 0.692308 NA intron (NM_032869, intron 1 of 9) MLT1H|LTR|ERVL-MaLR 1467 NM_032869 84955 Hs.380291 NM_032869 ENSG00000120526 NUDCD1 CML66|OVA66 NudC domain containing 1 protein-coding 210.308-3 chr14 68288319 68288833 + 0.692308 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 340211 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 199.231-2 chr10 34229209 34229726 + 0.692308 NA intron (NM_001184789, intron 20 of 22) AluJr|SINE|Alu -456787 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 179.923 chr5 141029960 141030473 + 0.692308 NA Intergenic Intergenic -21160 NM_013340 29930 Hs.278950 NM_013340 ENSG00000171815 PCDHB1 PCDH-BETA1 protocadherin beta 1 protein-coding 160.692 chr1 39983521 39983893 + 0.692308 NA Intergenic AluSq2|SINE|Alu 28562 NR_109896 84879 Hs.655177 NM_032793 ENSG00000168389 MFSD2A MCPH15|MFSD2|NLS1 major facilitator superfamily domain containing 2A protein-coding 192.308-6 chr7 132622000 132622458 + 0.692308 NA intron (NM_181775, intron 2 of 4) MLT1J2|LTR|ERVL-MaLR 26459 NM_181775 91584 Hs.511454 NM_020911 ENSG00000221866 PLXNA4 FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003 plexin A4 protein-coding 193.923 chr2 35647847 35648411 + 0.692308 NA Intergenic L1MEf|LINE|L1 176724 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 176.769-8 chr5 8460182 8460642 + 0.692308 NA promoter-TSS (NR_039663) promoter-TSS (NR_039663) -513 NR_039663 100616142 NR_039663 ENSG00000284000 MIR4458 mir-4458 microRNA 4458 ncRNA 223.769-3 chr3 59172503 59172936 + 0.692308 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -122687 NM_001351533 200844 Hs.368434 NM_198463 ENSG00000163689 C3orf67 - chromosome 3 open reading frame 67 protein-coding 175.846-3 chr13 69203712 69204049 + 0.692308 NA Intergenic L1M3|LINE|L1 -18466 NR_125752 103689913 Hs.585628 NR_125752 ENSG00000235221 LINC00383 LINC00401 long intergenic non-protein coding RNA 383 ncRNA 154.308-5 chr5 4854379 4854692 + 0.692308 NA Intergenic L1MD2|LINE|L1 81054 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 181.385-2 chr17 66622345 66622840 + 0.692308 NA intron (NM_002737, intron 3 of 16) intron (NM_002737, intron 3 of 16) -164480 NR_030364 693219 NR_030364 ENSG00000207943 MIR634 MIRN634|hsa-mir-634 microRNA 634 ncRNA 229.769 chr18 78669672 78670087 + 0.692308 NA Intergenic Intergenic -310396 NM_171999 27164 Hs.700557 NM_171999 ENSG00000256463 SALL3 ZNF796 spalt like transcription factor 3 protein-coding 156-15 chr8 109641514 109641907 + 0.692308 NA intron (NM_001099746, intron 1 of 5) intron (NM_001099746, intron 1 of 5) 1480 NM_001099756 55638 Hs.390738 NM_017786 ENSG00000147642 SYBU GOLSYN|OCSYN|SNPHL syntabulin protein-coding 157.692-5 chr15 94216726 94217222 + 0.692308 NA Intergenic L1MA3|LINE|L1 -81227 NM_018349 55784 Hs.33368 NM_018349 ENSG00000140563 MCTP2 - multiple C2 and transmembrane domain containing 2 protein-coding 173.077 chr12 63774002 63774527 + 0.692308 NA Intergenic L1M6|LINE|L1 -5645 NM_014254 10329 Hs.216386 NM_014254 ENSG00000118600 RXYLT1 HP10481|MDDGA10|TMEM5 ribitol xylosyltransferase 1 protein-coding 211.616 chr3 192052325 192052759 + 0.692308 NA Intergenic L1MC5a|LINE|L1 -186088 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 181.154 chr10 3162657 3163228 + 0.692308 NA intron (NR_144639, intron 7 of 26) L1MC5a|LINE|L1 9774 NM_001347730 10531 Hs.528300 NM_014889 ENSG00000107959 PITRM1 MP1|PreP pitrilysin metallopeptidase 1 protein-coding 196-2 chr11 101329945 101330296 + 0.692308 NA Intergenic MER54A|LTR|ERVL 189785 NR_037485 100500823 NR_037485 ENSG00000263885 MIR3920 - microRNA 3920 ncRNA 234.385 chr6 76169920 76170689 + 0.692308 NA Intergenic L1PA15|LINE|L1 -97626 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 197.615-2 chr4 62441894 62442430 + 0.692308 NA Intergenic AluSz|SINE|Alu -280397 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 155.308 chr11 31846369 31846743 + 0.692308 NA intron (NR_033971, intron 1 of 2) intron (NR_033971, intron 1 of 2) 19989 NR_117094 103157000 NR_117094 ENSG00000281880 PAUPAR - PAX6 upstream antisense RNA ncRNA 174.769-7 chr4 35576766 35577081 + 0.692308 NA Intergenic L1MEf|LINE|L1 667016 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 157.077-5 chr17 18344708 18345044 + 0.692308 NA intron (NM_004169, intron 5 of 11).2 intron (NM_004169, intron 5 of 11).2 -3990 NR_106836 102466733 NR_106836 ENSG00000283772 MIR6778 hsa-mir-6778 microRNA 6778 ncRNA 155.538-3 chr10 115502405 115502679 + 0.692308 NA intron (NM_207303, intron 24 of 28) MER4-int|LTR|ERV1 409177 NM_207303 26033 Hs.501127 NM_207303 ENSG00000107518 ATRNL1 ALP|bA338L11.1|bA454H24.1 attractin like 1 protein-coding 156-5 chr12 17614825 17615216 + 0.692308 NA Intergenic Intergenic -25942 NR_146522 105369678 NR_146522 LINC02378 - long intergenic non-protein coding RNA 2378 ncRNA 156.077-2 chr5 18481963 18482313 + 0.692308 NA Intergenic Intergenic 674864 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 212.846-2 chr6 79336686 79337166 + 0.692308 NA Intergenic HAL1ME|LINE|L1 -23542 NR_130915 80078 NR_130915 ENSG00000286042 LCAL1 onco-lncRNA-27 lung cancer associated lncRNA 1 ncRNA 164.769-5 chr2 223256352 223256704 + 0.692308 NA Intergenic L1ME3|LINE|L1 204598 NM_080671 23704 Hs.348522 NM_080671 ENSG00000152049 KCNE4 MIRP3 potassium voltage-gated channel subfamily E regulatory subunit 4 protein-coding 161.077 chr1 93233543 93234023 + 0.692308 NA intron (NM_001306076, intron 18 of 28) AluSp|SINE|Alu 53067 NM_001306076 343099 Hs.482873 NM_206886 ENSG00000122483 CCDC18 NY-SAR-41 coiled-coil domain containing 18 protein-coding 160.385-2 chr13 107544363 107544645 + 0.692308 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -13256 NR_031671 100302286 NR_031671 ENSG00000221650 MIR1267 MIRN1267|hsa-mir-1267 microRNA 1267 ncRNA 200.769 chr17 78337139 78337652 + 0.692308 NA Intergenic Intergenic 22684 NM_003955 9021 Hs.527973 NM_003955 ENSG00000184557 SOCS3 ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3 suppressor of cytokine signaling 3 protein-coding 167.308-6 chr5 19880452 19880851 + 0.692308 NA intron (NM_001291957, intron 1 of 12) intron (NM_001291957, intron 1 of 12) 5621 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 180.231-4 chr3 98053030 98053423 + 0.692308 NA Intergenic Intergenic -17922 NR_047685 200959 Hs.534578 NM_001105580 ENSG00000183185 GABRR3 - gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene) protein-coding 156.308-9 chr7 50699467 50699746 + 0.692308 NA intron (NM_001371009, intron 2 of 15) L1ME4a|LINE|L1 5695 NM_001001550 2887 Hs.164060 NM_005311 ENSG00000106070 GRB10 GRB-IR|Grb-10|IRBP|MEG1|RSS growth factor receptor bound protein 10 protein-coding 225.692-12 chr7 133766222 133766840 + 0.692308 NA intron (NM_021807, intron 10 of 17) intron (NM_021807, intron 10 of 17) 58357 NR_120513 101928861 Hs.675747 NR_120513 LOC101928861 - uncharacterized LOC101928861 ncRNA 226.846 chr1 180310473 180310835 + 0.692308 NA intron (NM_032360, intron 7 of 7) L1ME3A|LINE|L1 -35973 NR_037642 100527964 Hs.496545 NR_037642 ENSG00000230124 LHX4-AS1 - LHX4 antisense RNA 1 ncRNA 185.615-3 chr14 55687621 55687955 + 0.692308 NA Intergenic Intergenic -78457 NR_004844 645683 Hs.663461 NR_004844 ENSG00000177350 RPL13AP3 RPL13A_11_1370 ribosomal protein L13a pseudogene 3 pseudo 172.154-3 chr11 112214961 112215282 + 0.692308 NA intron (NM_031938, intron 10 of 11) intron (NM_031938, intron 10 of 11) -11307 NM_000317 5805 Hs.503860 NM_000317 ENSG00000150787 PTS PTPS 6-pyruvoyltetrahydropterin synthase protein-coding 155.231-7 chr4 115303435 115303820 + 0.692308 NA Intergenic Intergenic -190007 NM_022569 64579 Hs.591700 NM_022569 ENSG00000138653 NDST4 N-HSST|N-HSST 4|NDST-4|NHSST4 N-deacetylase and N-sulfotransferase 4 protein-coding 202.692-3 chr8 25579778 25580170 + 0.692308 NA Intergenic Intergenic 120741 NM_152562 157313 Hs.33366 NM_152562 ENSG00000184661 CDCA2 PPP1R81|Repo-Man cell division cycle associated 2 protein-coding 176.923-4 chr2 57186864 57187245 + 0.692308 NA Intergenic L1PA16|LINE|L1 -720597 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 177.154-2 chr14 76850918 76851488 + 0.692308 NA intron (NM_194287, intron 7 of 13) MamRep1879|DNA|hAT-Tip100? 24795 NM_194287 145497 Hs.147276 NM_194287 ENSG00000100565 LRRC74A C14orf166B|LRRC74 leucine rich repeat containing 74A protein-coding 154-2 chr14 68862997 68863338 + 0.692308 NA Intergenic MIR|SINE|MIR -66924 NM_001244701 677 Hs.85155 NM_004926 ENSG00000185650 ZFP36L1 BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1 ZFP36 ring finger protein like 1 protein-coding 165.923-7 chr6 106754261 106754588 + 0.692308 NA intron (NR_147987, intron 1 of 2) intron (NR_147987, intron 1 of 2) -29701 NR_030314 693172 NR_030314 ENSG00000207577 MIR587 MIRN587|hsa-mir-587 microRNA 587 ncRNA 164.385-3 chr5 22949306 22949856 + 0.692308 NA Intergenic Intergenic -96237 NM_004061 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 165-4 chr2 132675665 132676157 + 0.692308 NA intron (NM_207481, intron 17 of 17) intron (NM_207481, intron 17 of 17) -4385 NM_001077427 116372 Hs.432395 NM_144586 ENSG00000150551 LYPD1 LYPDC1|PHTS LY6/PLAUR domain containing 1 protein-coding 169.308-3 chr22 36338872 36339439 + 0.692308 NA intron (NM_002473, intron 3 of 40) intron (NM_002473, intron 3 of 40) 48912 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding 200.539 chr6 67527746 67528320 + 0.692308 NA Intergenic Intergenic -527318 NR_125869 102723883 Hs.566528 NR_125869 ENSG00000223504 LOC102723883 - uncharacterized LOC102723883 ncRNA 159.846-2 chr11 48578119 48578530 + 0.692308 NA Intergenic Intergenic 89531 NM_001005512 403253 Hs.554532 NM_001005512 ENSG00000237388 OR4A47 OR11-113 olfactory receptor family 4 subfamily A member 47 protein-coding 211-2 chr9 19797842 19798468 + 0.692308 NA Intergenic Intergenic -11136 NM_020344 25769 Hs.283014 NM_020344 ENSG00000155886 SLC24A2 NCKX2 solute carrier family 24 member 2 protein-coding 167.769-8 chr6 99361471 99361933 + 0.692308 NA Intergenic MLT1J|LTR|ERVL-MaLR -11646 NM_001346530 84553 Hs.573245 NM_032511 ENSG00000146267 FAXC C6orf168|dJ273F20 failed axon connections homolog, metaxin like GST domain containing protein-coding 157.154-5 chr4 42311309 42311764 + 0.692308 NA intron (NR_134668, intron 1 of 1) LTR33|LTR|ERVL 79732 NR_134668 105374428 Hs.245131 NR_134668 ENSG00000250781 LOC105374428 - uncharacterized LOC105374428 ncRNA 201.846-7 chr2 211739910 211740317 + 0.692308 NA intron (NM_001042599, intron 5 of 26) intron (NM_001042599, intron 5 of 26) 686247 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA 161.538-2 chr1 45457738 45458104 + 0.692308 NA intron (NM_007170, intron 1 of 10) intron (NM_007170, intron 1 of 10) 33242 NM_001320800 10420 Hs.591499 NM_007170 ENSG00000070759 TESK2 - testis associated actin remodelling kinase 2 protein-coding 170.846-3 chr17 32133122 32133751 + 0.692308 NA Intergenic (AT)n|Simple_repeat|Simple_repeat -9018 NM_001033568 55288 Hs.655325 NM_018307 ENSG00000126858 RHOT1 ARHT1|MIRO-1|MIRO1 ras homolog family member T1 protein-coding 163.308-4 chr13 113649430 113649976 + 0.692308 NA intron (NM_000705, intron 6 of 6) intron (NM_000705, intron 6 of 6) 8495 NM_000705 496 Hs.434202 NM_000705 ENSG00000186009 ATP4B ATP6B ATPase H+/K+ transporting subunit beta protein-coding 158.769-8 chr22 39443806 39444144 + 0.692308 NA Intergenic AluSz6|SINE|Alu 11815 NR_040535 100506472 Hs.729080 NR_040535 LOC100506472 - uncharacterized LOC100506472 ncRNA 172.692 chr10 18486146 18486688 + 0.692308 NA intron (NM_201593, intron 3 of 13) intron (NM_201593, intron 3 of 13) 85842 NM_201570 783 Hs.59093 NM_000724 ENSG00000165995 CACNB2 CACNLB2|CAVB2|MYSB calcium voltage-gated channel auxiliary subunit beta 2 protein-coding 161.077-10 chr6 51026587 51027033 + 0.692308 NA Intergenic Intergenic 207939 NM_003221 7021 Hs.33102 NM_003221 ENSG00000008196 TFAP2B AP-2B|AP2-B|PDA2 transcription factor AP-2 beta protein-coding 194.615-4 chr21 27499209 27499493 + 0.692308 NA Intergenic Intergenic -223028 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 164.308-8 chr22 20993520 20993804 + 0.692308 NA exon (NM_006767, exon 12 of 21) exon (NM_006767, exon 12 of 21) -8260 NR_027052 439931 Hs.517430 NR_027051 ENSG00000230513 THAP7-AS1 - THAP7 antisense RNA 1 ncRNA 166.231 chr13 82800938 82801337 + 0.692308 NA Intergenic Tigger3b|DNA|TcMar-Tigger 1081256 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding 157.923-5 chr9 27932792 27933258 + 0.692308 NA Intergenic Intergenic -359159 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 191.385-4 chr2 103015937 103016455 + 0.692308 NA Intergenic Intergenic -31767 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 174.923-10 chr6 27968858 27969161 + 0.692308 NA Intergenic Intergenic 11768 NM_012367 26212 Hs.532145 NM_012367 ENSG00000124657 OR2B6 OR2B1|OR2B1P|OR2B5|OR2B6P|OR5-40|OR5-41|OR6-31|dJ408B20.2 olfactory receptor family 2 subfamily B member 6 protein-coding 204.846 chr1 173967867 173968201 + 0.692308 NA intron (NM_001300852, intron 8 of 18) L1M5|LINE|L1 25038 NM_001300850 149041 Hs.30258 NM_172071 ENSG00000135870 RC3H1 RNF198|ROQUIN ring finger and CCCH-type domains 1 protein-coding 158.692-2 chr18 68378033 68378524 + 0.692308 NA Intergenic Tigger18a|DNA|TcMar-Tigger 336830 NM_001350515 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding 237.385 chr4 49060967 49061335 + 0.692308 NA intron (NM_001286791, intron 15 of 15) L1ME4a|LINE|L1 74509 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 159.539 chr10 92936246 92936802 + 0.692308 NA intron (NM_001319195, intron 12 of 21) AluSx3|SINE|Alu 88004 NM_001319195 54536 Hs.655657 NM_019053 ENSG00000138190 EXOC6 EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p exocyst complex component 6 protein-coding 185.308 chr6 76204344 76204761 + 0.692308 NA Intergenic L2|LINE|L2 -131874 NM_001282368 3617 Hs.590893 NM_001563 ENSG00000112706 IMPG1 GP147|IPM150|SPACR|VMD4 interphotoreceptor matrix proteoglycan 1 protein-coding 162.692-8 chr8 19829496 19829838 + 0.692308 NA intron (NR_148458, intron 9 of 18) intron (NR_148458, intron 9 of 18) 12251 NM_018142 55174 Hs.512627 NM_018142 ENSG00000104613 INTS10 C8orf35|INT10 integrator complex subunit 10 protein-coding 162-13 chr8 122491739 122492153 + 0.692308 NA intron (NR_131202, intron 2 of 3) MLT1A0|LTR|ERVL-MaLR 76698 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 177-3 chr8 120775826 120776234 + 0.692308 NA intron (NR_125419, intron 4 of 4) L1P2|LINE|L1 14777 NR_125419 101927543 Hs.371902 NR_125419 ENSG00000248318 LOC101927543 - uncharacterized LOC101927543 ncRNA 157.308-9 chr7 137563984 137564248 + 0.692308 NA intron (NM_001321710, intron 19 of 32) L1MEf|LINE|L1 -220383 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding 158.231-2 chr12 16896459 16896927 + 0.692308 NA Intergenic Intergenic -92054 NR_036619 728622 Hs.741380 NR_036619 SKP1P2 SKP1B|p19B S-phase kinase associated protein 1 pseudogene 2 pseudo 158.692-8 chr9 20371177 20371467 + 0.692308 NA intron (NM_001286691, intron 5 of 10) Tigger1|DNA|TcMar-Tigger 39916 NR_039684 100616229 NR_039684 ENSG00000263790 MIR4473 - microRNA 4473 ncRNA 254.615 chr10 103676940 103677661 + 0.692308 NA intron (NM_014631, intron 6 of 13) intron (NM_014631, intron 6 of 13) 915 NM_001365079 9644 Hs.678727 NM_014631 ENSG00000107957 SH3PXD2A FISH|SH3MD1|TKS5 SH3 and PX domains 2A protein-coding 174.385-5 chr5 85450973 85451330 + 0.692308 NA Intergenic Intergenic -831293 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 197.154-3 chr4 86319730 86320196 + 0.692308 NA intron (NM_001363657, intron 2 of 13) LTR16E1|LTR|ERVL 34681 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding 192.923-3 chr2 47143971 47144453 + 0.692308 NA intron (NM_001163561, intron 3 of 6) intron (NM_001163561, intron 3 of 6) 11096 NM_001163561 285051 Hs.531575 NM_173649 ENSG00000239605 STPG4 C2orf61|GSE sperm-tail PG-rich repeat containing 4 protein-coding 158.384 chr14 83705348 83705761 + 0.692308 NA Intergenic Intergenic 1062922 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 182-3 chr6 27237988 27238489 + 0.692308 NA Intergenic Intergenic -9463 NM_005865 10279 Hs.274407 NM_005865 ENSG00000112812 PRSS16 TSSP serine protease 16 protein-coding 154.692-6 chr8 3836546 3837117 + 0.692308 NA intron (NM_033225, intron 5 of 69) (TTTAATA)n|Simple_repeat|Simple_repeat -1108380 NR_125426 101927815 Hs.571467 NR_125423 ENSG00000254319 LOC101927815 - uncharacterized LOC101927815 ncRNA 155.846-3 chr11 11649193 11649588 + 0.692308 NA Intergenic L1ME1|LINE|L1 7332 NR_036184 100423026 NR_036184 ENSG00000266645 MIR4299 - microRNA 4299 ncRNA 181.231-4 chr4 67347339 67347907 + 0.692308 NA Intergenic Intergenic 74377 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA 171.462-2 chr13 72734901 72735168 + 0.692308 NA intron (NM_024808, intron 4 of 11) intron (NM_024808, intron 4 of 11) 7111 NM_024808 79866 Hs.643464 NM_024808 ENSG00000136122 BORA C13orf34 BORA aurora kinase A activator protein-coding 160.615-15 chr8 70894825 70895281 + 0.692308 NA Intergenic L1MA5|LINE|L1 225714 NM_001287260 389668 Hs.458938 NM_001011720 ENSG00000221947 XKR9 XRG9 XK related 9 protein-coding 177.539-3 chr8 9765347 9765731 + 0.692308 NA intron (NM_003747, intron 23 of 26) intron (NM_003747, intron 23 of 26) 23867 NR_030327 693182 NR_030327 ENSG00000207701 MIR597 MIRN597|hsa-mir-597|mir-597 microRNA 597 ncRNA 158.923-5 chr14 70647158 70647464 + 0.692308 NA intron (NM_015351, intron 1 of 2) MER45B|DNA|hAT-Tip100 5395 NM_015351 23508 Hs.79170 NM_015351 ENSG00000133985 TTC9 TTC9A tetratricopeptide repeat domain 9 protein-coding 197.231-2 chr12 54910193 54910503 + 0.692308 NA Intergenic L1MA4|LINE|L1 55832 NM_058173 118430 Hs.348419 NM_058173 ENSG00000172551 MUCL1 SBEM mucin like 1 protein-coding 181.615 chr10 62402177 62402791 + 0.692308 NA TTS (NM_014951) TTS (NM_014951) -27357 NR_104162 283045 NR_104162 LOC283045 - uncharacterized LOC283045 ncRNA 152.308-4 chr15 57062383 57062634 + 0.692308 NA intron (NM_001322164, intron 3 of 19) intron (NM_001322164, intron 3 of 19) 143063 NM_001322165 6938 Hs.511504 NM_003205 ENSG00000140262 TCF12 CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 transcription factor 12 protein-coding 183.077-3 chr2 220957103 220957537 + 0.692308 NA Intergenic MER89|LTR|ERV1 614984 NM_001363748 2043 Hs.371218 NM_004438 ENSG00000116106 EPHA4 EK8|HEK8|SEK|TYRO1 EPH receptor A4 protein-coding 178.539-2 chr14 45401913 45402249 + 0.692308 NA Intergenic Intergenic -148879 NM_018353 55320 Hs.732769 NM_018353 ENSG00000129534 MIS18BP1 C14orf106|HSA242977|KNL2|M18BP1 MIS18 binding protein 1 protein-coding 172.539 chr21 29501855 29502322 + 0.692308 NA Intergenic Intergenic 6041 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA 212.846-4 chr7 133037122 133037499 + 0.692308 NA intron (NR_133671, intron 2 of 10) L1ME4a|LINE|L1 -2395 NR_037427 100500804 NR_037427 ENSG00000284135 MIR3654 - microRNA 3654 ncRNA 174.308-3 chr10 53177079 53177392 + 0.692308 NA Intergenic L1MC1|LINE|L1 -405535 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 155.769-2 chr12 76540861 76541231 + 0.692308 NA intron (NM_001319652, intron 1 of 25) intron (NM_001319652, intron 1 of 25) 18725 NM_001003712 114882 Hs.430849 NM_020841 ENSG00000091039 OSBPL8 MST120|MSTP120|ORP8|OSBP10 oxysterol binding protein like 8 protein-coding 157-6 chr4 64514779 64515077 + 0.692308 NA Intergenic Intergenic -105468 NM_001363796 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 172.461 chr1 116839160 116839531 + 0.692308 NA Intergenic Intergenic -70571 NM_020440 5738 Hs.418093 NM_020440 ENSG00000134247 PTGFRN CD315|CD9P-1|EWI-F|FPRP|SMAP-6 prostaglandin F2 receptor inhibitor protein-coding 205.923-2 chr16 47713269 47713672 + 0.692308 NA Intergenic LTR64|LTR|ERV1 -145111 NR_110650 101927132 Hs.589404 NR_110650 ENSG00000261231 LINC02133 - long intergenic non-protein coding RNA 2133 ncRNA 165.308 chr1 54804921 54805435 + 0.692308 NA promoter-TSS (NM_152607) promoter-TSS (NM_152607) -885 NM_152607 163747 Hs.376018 NM_152607 ENSG00000162398 LEXM C1orf177|LEM lymphocyte expansion molecule protein-coding 156.615-6 chr3 165930436 165930675 + 0.692308 NA Intergenic Intergenic -93132 NM_000055 590 Hs.420483 NM_000055 ENSG00000114200 BCHE BCHED|CHE1|CHE2|E1 butyrylcholinesterase protein-coding 155.615 chr1 23506580 23506984 + 0.692308 NA 3' UTR (NM_004091, exon 7 of 7) 3' UTR (NM_004091, exon 7 of 7) -15148 NR_110799 101928163 Hs.588761 NR_110799 LOC101928163 - uncharacterized LOC101928163 ncRNA 197.615 chr20 57395543 57395994 + 0.692308 NA intron (NM_017495, intron 3 of 3) intron (NM_017495, intron 3 of 3) -2712 NR_149006 100291105 Hs.638423 NR_149006 ENSG00000218018 LOC100291105 - uncharacterized LOC100291105 ncRNA 164.692-3 chr12 26714173 26714537 + 0.692308 NA intron (NM_002223, intron 8 of 56) intron (NM_002223, intron 8 of 56) 118839 NM_002223 3709 Hs.512235 NM_002223 ENSG00000123104 ITPR2 ANHD|CFAP48|INSP3R2|IP3R2 inositol 1,4,5-trisphosphate receptor type 2 protein-coding 169.615-14 chr9 108529067 108529600 + 0.692308 NA Intergenic Intergenic 326653 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding 195.231-2 chr1 214527437 214527980 + 0.692308 NA intron (NM_005401, intron 1 of 18) intron (NM_005401, intron 1 of 18) 23894 NM_005401 5784 Hs.193557 NM_005401 ENSG00000152104 PTPN14 CATLPH|PEZ|PTP36 protein tyrosine phosphatase non-receptor type 14 protein-coding 165.769-8 chr16 74662215 74662707 + 0.692308 NA intron (NM_001370534, intron 1 of 12) L2a|LINE|L2 4416 NM_001370543 55159 Hs.567525 NM_018124 ENSG00000168411 RFWD3 FANCW|RNF201 ring finger and WD repeat domain 3 protein-coding 156.231-7 chr8 128127626 128128009 + 0.692308 NA Intergenic Intergenic -22299 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 180.538-3 chr5 59181009 59181548 + 0.692308 NA intron (NM_001349243, intron 6 of 16) intron (NM_001349243, intron 6 of 16) 94837 NM_001197220 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 184.846-7 chr18 64168273 64168658 + 0.692308 NA intron (NR_033881, intron 2 of 9) intron (NR_033881, intron 2 of 9) -19439 NR_027245 221241 Hs.567778 NM_152728 ENSG00000179676 LINC00305 C18orf20|HsT1235|NCRNA00305 long intergenic non-protein coding RNA 305 ncRNA 208.692-2 chr4 58950422 58950793 + 0.692308 NA Intergenic MIRb|SINE|MIR -33675 NR_133941 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 216.461 chr2 38103271 38103841 + 0.692308 NA Intergenic L1PREC2|LINE|L1 -27375 NM_000104 1545 Hs.154654 NM_000104 ENSG00000138061 CYP1B1 ASGD6|CP1B|CYPIB1|GLC3A|P4501B1 cytochrome P450 family 1 subfamily B member 1 protein-coding 203.462 chr7 891744 892250 + 0.692308 NA intron (NM_015949, intron 5 of 8) intron (NM_015949, intron 5 of 8) 15443 NM_015949 51608 Hs.107387 NM_015949 ENSG00000239857 GET4 C7orf20|CEE|CGI-20|TRC35 guided entry of tail-anchored proteins factor 4 protein-coding 187.692-2 chr12 130803940 130804548 + 0.692308 NA intron (NM_001351051, intron 7 of 10) intron (NM_001351051, intron 7 of 10) 35006 NM_001351049 2054 Hs.437585 NM_001980 ENSG00000111450 STX2 EPIM|EPM|STX2A|STX2B|STX2C syntaxin 2 protein-coding 176.538-6 chr8 116643360 116643994 + 0.692308 NA 3' UTR (NM_003756, exon 8 of 8) 3' UTR (NM_003756, exon 8 of 8) -8423 NR_136278 105375713 NR_136278 LOC105375713 - uncharacterized LOC105375713 ncRNA 210.231-2 chr3 34498867 34499441 + 0.692308 NA Intergenic L2a|LINE|L2 700524 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 154.769-2 chr11 43877981 43878264 + 0.692308 NA Intergenic ERVL-E-int|LTR|ERVL -2709 NM_139178 221120 Hs.720708 NM_139178 ENSG00000166199 ALKBH3 ABH3|DEPC-1|DEPC1|PCA1|hABH3 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase protein-coding 154.769-6 chr8 114405515 114405949 + 0.692308 NA Intergenic L1MA5|LINE|L1 -968793 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 182.769-11 chr4 103080849 103081183 + 0.692308 NA intron (NM_020139, intron 9 of 9) intron (NM_020139, intron 9 of 9) -3697 NM_001370201 133308 Hs.546482 NM_178833 ENSG00000164038 SLC9B2 NHA2|NHE10|NHEDC2 solute carrier family 9 member B2 protein-coding 231.231-2 chr2 229805383 229806006 + 0.692308 NA intron (NM_001348330, intron 18 of 41) intron (NM_001348330, intron 18 of 41) -91139 NM_139072 92737 Hs.234074 NM_139072 ENSG00000187957 DNER UNQ26|bet delta/notch like EGF repeat containing protein-coding 170.615-5 chr7 97110014 97110343 + 0.692308 NA Intergenic AluY|SINE|Alu -6415 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding 177.692-4 chr8 118405734 118406213 + 0.692308 NA intron (NM_001349811, intron 3 of 4) intron (NM_001349811, intron 3 of 4) -215028 NR_038210 552860 Hs.571527 NR_038210 ENSG00000281641 SAMD12-AS1 C8orf26|NCRNA00252 SAMD12 antisense RNA 1 ncRNA 167.462-2 chr5 58550322 58550754 + 0.692308 NA intron (NR_109904, intron 1 of 3) L1MC4|LINE|L1 7705 NR_109904 101928600 Hs.694699 NR_109904 ENSG00000250127 LINC02108 - long intergenic non-protein coding RNA 2108 ncRNA 211.231-5 chr9 34403997 34404340 + 0.692308 NA intron (NM_001184943, intron 2 of 5) L1ME3G|LINE|L1 -6358 NM_032596 84688 Hs.50334 NM_032596 ENSG00000164972 C9orf24 CBE1|NYD-SP22|SMRP1|bA573M23.4 chromosome 9 open reading frame 24 protein-coding 176.692-3 chr14 48245721 48246140 + 0.692308 NA Intergenic LTR37-int|LTR|ERV1 -450916 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 177-2 chr12 72687703 72688234 + 0.692308 NA Intergenic Intergenic -414459 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA 199-2 chr18 10140274 10140795 + 0.692308 NA Intergenic Intergenic 226518 NM_003574 9218 Hs.165195 NM_003574 ENSG00000101558 VAPA VAP-33|VAP-A|VAP33|hVAP-33 VAMP associated protein A protein-coding 170.923-4 chr17 59070783 59071245 + 0.692308 NA intron (NR_148346, intron 8 of 23) intron (NR_148346, intron 8 of 23) 35866 NM_001320989 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding 174.615-8 chr3 116351290 116351649 + 0.692308 NA intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) -8555 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA 242.769-2 chr2 197285768 197286262 + 0.692308 NA intron (NR_046837, intron 5 of 5) intron (NR_046837, intron 5 of 5) 16504 NR_046837 101927547 Hs.687027 NR_046837 ENSG00000236977 ANKRD44-IT1 - ANKRD44 intronic transcript 1 ncRNA 163.615-3 chr17 33820233 33820616 + 0.692308 NA intron (NM_001094, intron 1 of 9) Charlie5|DNA|hAT-Charlie -286664 NR_037584 100506677 Hs.652571 NR_037584 ENSG00000265544 AA06 AA02|AA04|AA05 uncharacterized LOC100506677 pseudo 155.769-11 chr8 126996280 126996658 + 0.692308 NA Intergenic Intergenic -16685 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 186.923-13 chr8 37812923 37813331 + 0.692308 NA intron (NM_032777, intron 1 of 18) AluJo|SINE|Alu 16244 NM_032777 25960 Hs.274136 NM_032777 ENSG00000020181 ADGRA2 GPR124|TEM5 adhesion G protein-coupled receptor A2 protein-coding 166-6 chr6 716019 716463 + 0.692308 NA Intergenic Intergenic -23100 NR_073064 55770 Hs.484412 NM_018303 ENSG00000112685 EXOC2 SEC5|SEC5L1|Sec5p exocyst complex component 2 protein-coding 151.769-2 chr1 156856720 156856988 + 0.692308 NA intron (NM_014215, intron 1 of 21) intron (NM_014215, intron 1 of 21) 2263 NM_014215 3645 Hs.248138 NM_014215 ENSG00000027644 INSRR IRR insulin receptor related receptor protein-coding 155.462-4 chr20 16820421 16820748 + 0.692308 NA Intergenic MLT1H1|LTR|ERVL-MaLR 72231 NM_020157 56914 Hs.41119 NM_020157 ENSG00000125879 OTOR FDP|MIAL1 otoraplin protein-coding 178.692 chr10 75527018 75527532 + 0.692308 NA intron (NM_001305581, intron 2 of 6) L1MB5|LINE|L1 -25183 NR_030337 693191 NR_030337 ENSG00000207583 MIR606 MIRN606|hsa-mir-606 microRNA 606 ncRNA 263.769 chr10 69348388 69348940 + 0.692308 NA intron (NM_033496, intron 2 of 17) AluSq|SINE|Alu 29817 NM_001322367 3098 Hs.370365 NM_000188 ENSG00000156515 HK1 HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase hexokinase 1 protein-coding 211.385-2 chr4 63412370 63413015 + 0.692308 NA Intergenic MER31-int|LTR|ERV1 996758 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 155.692-7 chr5 149180512 149180862 + 0.692308 NA intron (NM_001370418, intron 1 of 18) LTR86A1|LTR|ERVL 38956 NM_001301015 22885 Hs.49688 NM_014945 ENSG00000173210 ABLIM3 HMFN1661 actin binding LIM protein family member 3 protein-coding 156.154-13 chr8 114974170 114974491 + 0.692308 NA Intergenic Intergenic 693683 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 160.615-14 chr8 14227473 14227736 + 0.692308 NA intron (NM_139167, intron 4 of 7) L3|LINE|CR1 597914 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 152.154-6 chr18 55561409 55561640 + 0.692308 NA intron (NM_001348217, intron 2 of 18) intron (NM_001348217, intron 2 of 18) 24595 NM_001306207 6925 Hs.605153 NM_003199 ENSG00000196628 TCF4 E2-2|FECD3|ITF-2|ITF2|PTHS|SEF-2|SEF2|SEF2-1|SEF2-1A|SEF2-1B|SEF2-1D|TCF-4|bHLHb19 transcription factor 4 protein-coding 154.846-3 chr3 94269275 94269506 + 0.692308 NA Intergenic MamTip2|DNA|hAT-Tip100 206329 NM_022072 63899 Hs.436594 NM_022072 ENSG00000178694 NSUN3 MST077|MSTP077 NOP2/Sun RNA methyltransferase 3 protein-coding 190.154-3 chr2 66238904 66239307 + 0.692308 NA Intergenic L1ME4a|LINE|L1 119223 NR_039938 100616464 NR_039938 ENSG00000264525 MIR4778 - microRNA 4778 ncRNA 167.769-2 chr14 62096075 62096361 + 0.692308 NA intron (NM_001367661, intron 8 of 8) L1MEd|LINE|L1 -21139 NR_015358 646113 Hs.445241 NM_001039785 LINC00643 - long intergenic non-protein coding RNA 643 ncRNA 175.231-2 chr4 45422586 45423009 + 0.692308 NA Intergenic L1PB1|LINE|L1 -696163 NM_001270881 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding 237.154 chr1 241442001 241442497 + 0.692308 NA Intergenic MSTA|LTR|ERVL-MaLR 77536 NM_000143 2271 Hs.592490 NM_000143 ENSG00000091483 FH FMRD|HLRCC|HsFH|LRCC|MCL|MCUL1 fumarate hydratase protein-coding 165.846-8 chr8 109478910 109479239 + 0.692308 NA intron (NM_177531, intron 53 of 77) intron (NM_177531, intron 53 of 77) -60626 NM_198120 9166 Hs.409368 NM_004215 ENSG00000147654 EBAG9 EB9|PDAF estrogen receptor binding site associated antigen 9 protein-coding 202.692-2 chr5 117753876 117754249 + 0.692308 NA intron (NR_104997, intron 1 of 2) MER5A1|DNA|hAT-Charlie 23701 NR_104997 102467224 Hs.134230 NR_104997 LINC02147 - long intergenic non-protein coding RNA 2147 ncRNA 168.461-2 chr4 140404029 140404486 + 0.692308 NA intron (NM_001130675, intron 6 of 15) AluY|SINE|Alu 23391 NM_004362 1047 Hs.86368 NM_004362 ENSG00000153132 CLGN - calmegin protein-coding 187.538-4 chr2 184830786 184831300 + 0.692308 NA intron (NM_194250, intron 1 of 3) intron (NM_194250, intron 1 of 3) 232514 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding 152.308-5 chr2 141089805 141090220 + 0.692308 NA intron (NM_018557, intron 7 of 90) intron (NM_018557, intron 7 of 90) -503327 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA 154.154-21 chr8 64462193 64462655 + 0.692308 NA Intergenic L1MEg|LINE|L1 83275 NR_029669 406908 NR_029669 ENSG00000207816 MIR124-2 MIRN124-2|MIRN124A2|mir-124-2 microRNA 124-2 ncRNA 192.923-5 chr4 75573547 75574034 + 0.692308 NA Intergenic Intergenic 17724 NR_046429 152816 Hs.24510 NM_178497 ENSG00000174792 ODAPH AI2A4|C4orf26 odontogenesis associated phosphoprotein protein-coding 159.231-11 chr7 55570461 55570774 + 0.692308 NA intron (NM_001321244, intron 1 of 5) intron (NM_001321244, intron 1 of 5) 1251 NM_001321250 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding 167-3 chr2 170534431 170535057 + 0.692308 NA intron (NR_045682, intron 31 of 35) MER53|DNA|hAT 179823 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA 351.385 chr2 101873580 101874221 + 0.692308 NA intron (NM_145686, intron 23 of 30) intron (NM_145686, intron 23 of 30) -109565 NR_103791 100506328 Hs.516245 NR_103791 LINC01127 - long intergenic non-protein coding RNA 1127 ncRNA 178.385-2 chr12 19490649 19491174 + 0.692308 NA intron (NM_001114176, intron 3 of 8) L1MB5|LINE|L1 50312 NM_001267043 121536 Hs.126497 NM_153207 ENSG00000139154 AEBP2 - AE binding protein 2 protein-coding 154-11 chr8 3921690 3922076 + 0.692308 NA intron (NM_033225, intron 5 of 69) L1MA9|LINE|L1 1073031 NM_033225 64478 Hs.571466 NM_033225 ENSG00000183117 CSMD1 PPP1R24 CUB and Sushi multiple domains 1 protein-coding 162.769-5 chr3 113573868 113574123 + 0.692308 NA intron (NR_136285, intron 3 of 20) L2|LINE|L2 -20881 NR_039648 100616476 NR_039648 ENSG00000265253 MIR4446 mir-4446 microRNA 4446 ncRNA 208.385 chr1 174469296 174469787 + 0.692308 NA intron (NM_001366446, intron 13 of 25) MER5A|DNA|hAT-Charlie 21577 NM_005684 9293 Hs.673850 NM_005684 ENSG00000203737 GPR52 - G protein-coupled receptor 52 protein-coding 179.077-3 chr13 90057458 90057855 + 0.692308 NA Intergenic Intergenic 62061 NR_047489 100874187 Hs.564526 NR_047489 ENSG00000261446 LINC00559 - long intergenic non-protein coding RNA 559 ncRNA 213.308-3 chr2 54769493 54770001 + 0.692308 NA intron (NM_001039753, intron 1 of 40) L1MA10|LINE|L1 44735 NM_001039753 400954 Hs.656692 NM_001039753 ENSG00000214595 EML6 - EMAP like 6 protein-coding 165.923-2 chr14 68587591 68587950 + 0.692308 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 41017 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 190.154-7 chr4 32405152 32405509 + 0.692308 NA Intergenic Intergenic 54292 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 228.769-4 chr5 141579664 141580039 + 0.692308 NA intron (NM_005219, intron 8 of 27) AluSx4|SINE|Alu 21540 NR_038333 100505658 Hs.655458 NR_038333 ENSG00000246422 LOC100505658 - uncharacterized LOC100505658 ncRNA 167.154-2 chr2 98057024 98057374 + 0.692308 NA Intergenic Intergenic -29968 NR_144297 200403 Hs.269977 NM_144992 ENSG00000168658 VWA3B SCAR22 von Willebrand factor A domain containing 3B protein-coding 153.923 chr10 106795714 106795970 + 0.692308 NA intron (NM_001206569, intron 3 of 25) MIR3|SINE|MIR 368864 NM_001206572 114815 Hs.591915 NM_052918 ENSG00000108018 SORCS1 hSorCS sortilin related VPS10 domain containing receptor 1 protein-coding 155.769-5 chr14 73100309 73100659 + 0.692308 NA intron (NM_021239, intron 9 of 18) intron (NM_021239, intron 9 of 18) -36023 NM_007318 5663 Hs.3260 NM_000021 ENSG00000080815 PSEN1 ACNINV3|AD3|FAD|PS-1|PS1|S182 presenilin 1 protein-coding 156.923-20 chr8 49546895 49547246 + 0.692308 NA Intergenic Intergenic -34890 NR_134294 100507464 Hs.245745 NR_134294 ENSG00000253380 LOC100507464 - uncharacterized LOC100507464 ncRNA 154-6 chr4 71429947 71430276 + 0.692308 NA intron (NM_003759, intron 4 of 22) intron (NM_003759, intron 4 of 22) 91058 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding 153.154-2 chr14 75129897 75130253 + 0.692308 NA Intergenic MER33|DNA|hAT-Charlie -3027 NM_033116 91754 Hs.7200 NM_033116 ENSG00000119638 NEK9 APUG|LCCS10|NC|NERCC|NERCC1 NIMA related kinase 9 protein-coding 217.846-4 chr5 3783469 3783994 + 0.692308 NA Intergenic L1MA4A|LINE|L1 187899 NM_024337 79192 Hs.424156 NM_024337 ENSG00000170549 IRX1 IRX-5|IRXA1 iroquois homeobox 1 protein-coding 161.539-6 chr5 51658635 51658904 + 0.692308 NA Intergenic Intergenic 275321 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding 164.308-6 chr14 84906361 84906725 + 0.692308 NA Intergenic Intergenic -365389 NR_145983 26843 NR_145983 SNORD3P3 RNU3P3|U3|U3.5|u3.7 small nucleolar RNA, C/D box 3 pseudogene 3 snoRNA 154.846 chr1 205555547 205555937 + 0.692308 NA non-coding (NR_027086, exon 4 of 4) non-coding (NR_027086, exon 4 of 4) -13272 NM_181644 148808 Hs.567714 NM_181644 ENSG00000174514 MFSD4A MFSD4|UNQ3064 major facilitator superfamily domain containing 4A protein-coding 155-6 chr5 44682239 44682793 + 0.692308 NA Intergenic L1PA15|LINE|L1 126277 NR_109863 100506674 Hs.575213 NR_109862 MRPS30-DT BRCAT54 MRPS30 divergent transcript ncRNA 161.308-11 chr2 103624531 103625175 + 0.692308 NA Intergenic L1PA16|LINE|L1 -640424 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 177.769 chr1 9753686 9754175 + 0.692308 NA intron (NM_001009566, intron 4 of 18) AluJr|SINE|Alu 62463 NM_001350235 5293 Hs.518451 NM_005026 ENSG00000171608 PIK3CD APDS|IMD14|P110DELTA|PI3K|p110D phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta protein-coding 153.769-4 chr5 5075856 5076259 + 0.692308 NA intron (NR_134266, intron 1 of 1) L1MB4|LINE|L1 2254 NR_134266 105374631 Hs.570964 NR_134266 ENSG00000250529 LINC02121 - long intergenic non-protein coding RNA 2121 ncRNA 166.077-7 chr8 110075257 110075724 + 0.692308 NA Intergenic Intergenic -99719 NM_014379 27012 Hs.13285 NM_014379 ENSG00000164794 KCNV1 HNKA|KCNB3|KV2.3|KV8.1 potassium voltage-gated channel modifier subfamily V member 1 protein-coding 201.231-5 chr9 4420771 4421147 + 0.692308 NA Intergenic Intergenic -69509 NM_004170 6505 Hs.444915 NM_004170 ENSG00000106688 SLC1A1 DCBXA|EAAC1|EAAT3|SCZD18 solute carrier family 1 member 1 protein-coding 173.692-3 chr6 115863143 115863646 + 0.692308 NA Intergenic Intergenic -175337 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo 155.385-2 chr1 112273948 112274197 + 0.692308 NA Intergenic AluSz|SINE|Alu -122142 NM_018704 55917 Hs.744100 NM_018704 ENSG00000143079 CTTNBP2NL - CTTNBP2 N-terminal like protein-coding 151.769-10 chr5 129431592 129431918 + 0.692308 NA Intergenic Intergenic -28543 NM_133638 171019 Hs.23751 NM_133638 ENSG00000145808 ADAMTS19 - ADAM metallopeptidase with thrombospondin type 1 motif 19 protein-coding 178.385-9 chr2 155843533 155844038 + 0.692308 NA Intergenic Intergenic 411146 NR_110249 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 176-2 chr12 55887645 55888001 + 0.692308 NA Intergenic L1MB4|LINE|L1 39302 NM_001143853 84305 Hs.505687 NM_032345 ENSG00000170473 PYM1 PYM|WIBG PYM homolog 1, exon junction complex associated factor protein-coding 162-9 chr4 67800276 67800637 + 0.692308 NA Intergenic Intergenic -44370 NM_000406 2798 Hs.407587 NM_000406 ENSG00000109163 GNRHR GNRHR1|GRHR|HH7|LHRHR|LRHR gonadotropin releasing hormone receptor protein-coding 154.615-8 chr2 161484853 161485152 + 0.692308 NA Intergenic L1MA5A|LINE|L1 22900 NR_077058 285116 Hs.470435 NR_077058 AHCTF1P1 AHCTF1P|ELYS-like AT-hook containing transcription factor 1 pseudogene 1 pseudo 176.385-3 chr8 78970306 78970636 + 0.692308 NA Intergenic L1M5|LINE|L1 132942 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA 170.461-3 chr4 39017392 39017765 + 0.692308 NA intron (NM_001303228, intron 1 of 6) L1MEd|LINE|L1 14831 NM_024943 80008 Hs.374147 NM_024943 ENSG00000121895 TMEM156 - transmembrane protein 156 protein-coding 154.385 chr1 21152845 21153094 + 0.692308 NA intron (NM_001198803, intron 1 of 12) AluJr4|SINE|Alu 15070 NM_001198803 8672 Hs.467084 NM_003760 ENSG00000075151 EIF4G3 eIF-4G 3|eIF4G 3|eIF4GII eukaryotic translation initiation factor 4 gamma 3 protein-coding 155.769 chr12 26509037 26509548 + 0.692308 NA intron (NM_002223, intron 37 of 56) L1MB7|LINE|L1 313719 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding 158.769-10 chr6 84308939 84309218 + 0.692308 NA Intergenic Intergenic -81435 NM_014895 22832 Hs.485865 NM_014895 ENSG00000135315 CEP162 C6orf84|KIAA1009|QN1 centrosomal protein 162 protein-coding 183.923-3 chr2 197917542 197918073 + 0.692308 NA intron (NM_006226, intron 1 of 5) L1MC3|LINE|L1 113214 NM_006226 5334 Hs.153322 NM_006226 ENSG00000115896 PLCL1 PLCE|PLCL|PLDL1|PPP1R127|PRIP phospholipase C like 1 (inactive) protein-coding 168.846-3 chr2 238348156 238348471 + 0.692308 NA intron (NM_001139490, intron 8 of 14) intron (NM_001139490, intron 8 of 14) 27769 NM_001139490 26146 Hs.631898 NM_015650 ENSG00000204104 TRAF3IP1 IFT54|MIP-T3|MIPT3|SLSN9 TRAF3 interacting protein 1 protein-coding 153.692-5 chr3 173858081 173858492 + 0.692308 NA intron (NM_001365928, intron 4 of 6) intron (NM_001365928, intron 4 of 6) 62510 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA 187.385-3 chr10 88017351 88017910 + 0.692308 NA Intergenic Intergenic 154005 NM_000314 5728 Hs.500466 NM_000314 ENSG00000171862 PTEN 10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|PTENbeta|TEP1 phosphatase and tensin homolog protein-coding 224-3 chr8 68165459 68165991 + 0.692308 NA intron (NM_024870, intron 35 of 39) ERV24_Prim-int|LTR|ERV1 -164648 NM_001349479 116328 Hs.491941 NM_052958 ENSG00000165084 C8orf34 VEST-1|VEST1 chromosome 8 open reading frame 34 protein-coding 158.769-6 chr2 57260509 57260808 + 0.692308 NA Intergenic MER45B|DNA|hAT-Tip100 -646993 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 204.308-3 chr4 149132847 149133427 + 0.692308 NA Intergenic MSTA-int|LTR|ERVL-MaLR -21158 NR_125887 101927849 Hs.434595 NR_125887 ENSG00000248210 LINC02355 - long intergenic non-protein coding RNA 2355 ncRNA 171.692 chr1 108565201 108565560 + 0.692308 NA intron (NM_001010883, intron 1 of 10) Tigger3c|DNA|TcMar-Tigger 5280 NM_001010883 284611 Hs.200230 NM_001010883 ENSG00000162636 FAM102B SYM-3B family with sequence similarity 102 member B protein-coding 165.769-2 chr10 62901547 62902005 + 0.692308 NA Intergenic MER34A|LTR|ERV1 -82609 NM_001136178 1959 Hs.1395 NM_000399 ENSG00000122877 EGR2 AT591|CHN1|CMT1D|CMT4E|KROX20 early growth response 2 protein-coding 192.462-2 chr15 77412438 77412864 + 0.692308 NA intron (NM_024776, intron 1 of 7) L1MD3|LINE|L1 7453 NM_024776 79834 Hs.9587 NM_024776 ENSG00000173517 PEAK1 SGK269 pseudopodium enriched atypical kinase 1 protein-coding 164-6 chr3 78843273 78843688 + 0.692308 NA intron (NM_002941, intron 4 of 30) intron (NM_002941, intron 4 of 30) 175979 NM_001145845 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding 170.769-7 chr15 62095559 62095922 + 0.692308 NA Intergenic Intergenic 28763 NM_207322 145741 Hs.202656 NM_207322 ENSG00000198535 C2CD4A FAM148A|NLF1 C2 calcium dependent domain containing 4A protein-coding 170.385 chr1 235941762 235942158 + 0.692308 NA Intergenic Intergenic -58247 NR_102436 1130 Hs.532411 NM_000081 ENSG00000143669 LYST CHS|CHS1 lysosomal trafficking regulator protein-coding 216.384-2 chr20 59616495 59617105 + 0.692308 NA intron (NM_080672, intron 1 of 12) intron (NM_080672, intron 1 of 12) 11489 NR_040513 100506384 Hs.663924 NR_040513 ENSG00000238194 LOC100506384 - uncharacterized LOC100506384 ncRNA 176.615 chr11 105041753 105042058 + 0.692308 NA intron (NM_001017534, intron 2 of 2) intron (NM_001017534, intron 2 of 2) 3419 NM_052889 114769 Hs.348365 NM_052889 ENSG00000204397 CARD16 COP|COP1|PSEUDO-ICE caspase recruitment domain family member 16 protein-coding 161.769-4 chr21 26706995 26707316 + 0.692308 NA Intergenic L1MEd|LINE|L1 -133869 NM_001320768 116159 Hs.37445 NM_052954 ENSG00000166265 CYYR1 C21orf95 cysteine and tyrosine rich 1 protein-coding 161.154-4 chr4 21140770 21141304 + 0.692308 NA intron (NM_147182, intron 2 of 8) Tigger1a_Art|DNA|TcMar-Tigger -157028 NM_001363504 80333 Hs.655705 NM_025221 ENSG00000185774 KCNIP4 CALP|KCHIP4 potassium voltage-gated channel interacting protein 4 protein-coding 227.923 chr1 245004768 245005279 + 0.692308 NA intron (NM_001290327, intron 2 of 7) L1MB3|LINE|L1 -34154 NR_111907 101928068 Hs.134857 NR_111907 LOC101928068 - uncharacterized LOC101928068 ncRNA 175.923-4 chr4 94255804 94256226 + 0.692308 NA intron (NM_001254949, intron 1 of 15) intron (NM_001254949, intron 1 of 15) 2706 NM_001254949 56916 Hs.410406 NM_020159 ENSG00000163104 SMARCAD1 ADERM|BASNS|ETL1|HEL1|HRZ SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding 165-5 chr2 153307661 153307995 + 0.692308 NA Intergenic Intergenic 170934 NM_019845 56475 Hs.100890 NM_019845 ENSG00000177519 RPRM REPRIMO reprimo, TP53 dependent G2 arrest mediator homolog protein-coding 158.615-11 chr7 3208734 3208984 + 0.692308 NA Intergenic Intergenic -50286 NR_126024 100129603 Hs.652997 NR_126024 LOC100129603 - uncharacterized LOC100129603 ncRNA 162.462-7 chr5 41459585 41459904 + 0.692308 NA intron (NM_001005473, intron 1 of 2) intron (NM_001005473, intron 1 of 2) 50857 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding 188.077-3 chr3 114721636 114722155 + 0.692308 NA intron (NM_001348801, intron 4 of 11) intron (NM_001348801, intron 4 of 11) 21630 NR_039959 100616166 NR_039959 ENSG00000264623 MIR4796 mir-4796 microRNA 4796 ncRNA 201.615 chr10 34328868 34329319 + 0.692308 NA intron (NM_001184789, intron 18 of 22) intron (NM_001184789, intron 18 of 22) 486203 NM_001184793 56288 Hs.131489 NM_019619 ENSG00000148498 PARD3 ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 par-3 family cell polarity regulator protein-coding 170.077-7 chr5 37273978 37274324 + 0.692308 NA Intergenic AluJb|SINE|Alu -24723 NM_023073 65250 Hs.586199 NM_023073 ENSG00000197603 CPLANE1 C5orf42|Hug|JBTS17|OFD6 ciliogenesis and planar polarity effector 1 protein-coding 167.615-6 chr9 125800452 125800727 + 0.692308 NA intron (NR_024122, intron 2 of 7) intron (NR_024122, intron 2 of 7) 52406 NM_001134778 5090 Hs.428027 NM_006195 ENSG00000167081 PBX3 - PBX homeobox 3 protein-coding 163-2 chr10 90285930 90286312 + 0.692308 NA Intergenic L1MC5a|LINE|L1 254684 NR_110657 101926942 Hs.382666 NR_110657 ENSG00000236373 LINC02653 - long intergenic non-protein coding RNA 2653 ncRNA 175.385-3 chr17 40403923 40404436 + 0.692308 NA exon (NM_001067, exon 19 of 35) exon (NM_001067, exon 19 of 35) 13717 NM_001067 7153 Hs.156346 NM_001067 ENSG00000131747 TOP2A TOP2|TP2A DNA topoisomerase II alpha protein-coding 181.385-4 chr9 83088486 83088969 + 0.692308 NA Intergenic L1M4|LINE|L1 -25585 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 164.308-12 chr8 65476509 65476915 + 0.692308 NA Intergenic Intergenic 85954 NR_033893 286186 Hs.449427 NR_033893 ENSG00000254081 LINC01299 - long intergenic non-protein coding RNA 1299 ncRNA 153.308 chr2 43367036 43367314 + 0.692308 NA intron (NM_001083953, intron 29 of 37) L1MB2|LINE|L1 139964 NR_027251 100129726 Hs.194480 NM_178529 ENSG00000279873 LINC01126 - long intergenic non-protein coding RNA 1126 ncRNA 168.846-6 chr6 96513803 96514149 + 0.692308 NA Intergenic Intergenic -7830 NM_015323 23376 Hs.149367 NM_015323 ENSG00000014123 UFL1 KIAA0776|Maxer|NLBP|RCAD UFM1 specific ligase 1 protein-coding 181.923-5 chr8 78094315 78094728 + 0.692308 NA Intergenic Intergenic -421819 NM_006823 5569 Hs.433700 NM_006823 ENSG00000171033 PKIA PRKACN1 cAMP-dependent protein kinase inhibitor alpha protein-coding 184.462-4 chr5 130471017 130471435 + 0.692308 NA Intergenic L1MC1|LINE|L1 566761 NM_175856 337876 Hs.213137 NM_175856 ENSG00000198108 CHSY3 CHSY2|CSS3 chondroitin sulfate synthase 3 protein-coding 161.308-12 chr6 94155300 94155754 + 0.692308 NA Intergenic Intergenic 437224 NR_152795 643432 Hs.509936 NR_015362 TSG1 - tumor suppressor TSG1 ncRNA 237.231-3 chrX 26296474 26297004 + 0.692308 NA Intergenic HSMAR2|DNA|TcMar-Mariner 80570 NM_001271752 347541 Hs.224079 NM_001271752 ENSG00000188408 MAGEB5 CT3.3|MAGE-B5 MAGE family member B5 protein-coding 189.769 chr5 14515415 14515802 + 0.692308 NA Intergenic Tigger5b|DNA|TcMar-Tigger 51625 NR_145815 109623458 NR_145815 SNORD170 - small nucleolar RNA, C/D box 170 snoRNA 158.308 chr1 74202796 74203244 + 0.692308 NA intron (NM_001112808, intron 3 of 26) Tigger3b|DNA|TcMar-Tigger 4808 NM_001199327 100526835 Hs.480085 NM_001112808 ENSG00000259030 FPGT-TNNI3K CARK|TNNI3K FPGT-TNNI3K readthrough protein-coding 169.308 chr18 1167163 1167455 + 0.692308 NA Intergenic Intergenic 192320 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 159.923-6 chr2 51679620 51680012 + 0.692308 NA intron (NR_135237, intron 5 of 10) HAL1|LINE|L1 647215 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 247.231-2 chr8 139334358 139334997 + 0.692308 NA Intergenic L1ME3A|LINE|L1 368446 NR_104210 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 155.769-10 chr4 81232489 81232911 + 0.692308 NA Intergenic LTR86A1|LTR|ERVL -17478 NM_001282485 5593 Hs.232044 NM_006259 ENSG00000138669 PRKG2 PKG2|PRKGR2|cGK2|cGKII protein kinase cGMP-dependent 2 protein-coding 199.385-5 chr8 92005485 92005825 + 0.692308 NA intron (NM_004349, intron 4 of 10) intron (NM_004349, intron 4 of 10) 12025 NM_175636 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 216.923-3 chr13 76014834 76015265 + 0.692308 NA Intergenic Intergenic -79917 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA 179-7 chr9 122374366 122374737 + 0.692308 NA promoter-TSS (NM_001271165) promoter-TSS (NM_001271165) -751 NM_001271165 5742 Hs.201978 NM_000962 ENSG00000095303 PTGS1 COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS prostaglandin-endoperoxide synthase 1 protein-coding 251 chr14 79090025 79090634 + 0.692308 NA intron (NR_073547, intron 14 of 20) intron (NR_073547, intron 14 of 20) -109653 NR_135159 105370586 NR_135159 ENSG00000258419 LOC105370586 - uncharacterized LOC105370586 ncRNA 155.154-3 chr7 83735278 83735736 + 0.692308 NA Intergenic L1ME3Cz|LINE|L1 -86368 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding 176.308-3 chr16 52376224 52376650 + 0.692308 NA Intergenic MER103C|DNA|hAT-Charlie 117873 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA 161.308-10 chr2 101305802 101306254 + 0.692308 NA intron (NM_173647, intron 1 of 6) L3|LINE|CR1 2673 NM_173647 284996 Hs.142074 NM_173647 ENSG00000163162 RNF149 DNAPTP2 ring finger protein 149 protein-coding 162.615 chr1 85174829 85175182 + 0.692308 NA intron (NM_032184, intron 4 of 6) intron (NM_032184, intron 4 of 6) 26011 NM_032184 84144 Hs.533853 NM_032184 ENSG00000097096 SYDE2 - synapse defective Rho GTPase homolog 2 protein-coding 159.923-4 chr15 55954710 55955052 + 0.692308 NA intron (NM_001329212, intron 2 of 28) intron (NM_001329212, intron 2 of 28) -37750 NM_001284340 4734 Hs.1565 NM_006154 ENSG00000069869 NEDD4 NEDD4-1|RPF1 NEDD4 E3 ubiquitin protein ligase protein-coding 152.615-6 chr8 115399420 115399805 + 0.692308 NA Intergenic Intergenic 268401 NM_001282902 7227 Hs.657018 NM_014112 ENSG00000104447 TRPS1 GC79|LGCR transcriptional repressor GATA binding 1 protein-coding 157.539-4 chr2 22301517 22301988 + 0.692308 NA Intergenic Intergenic -234727 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 219.923-2 chr5 9836996 9837357 + 0.692308 NA intron (NR_027112, intron 4 of 12) ERVL-E-int|LTR|ERVL -17201 NR_147004 105374648 Hs.158853 NR_147004 LINC02221 - long intergenic non-protein coding RNA 2221 ncRNA 158.538-6 chr2 55940670 55941060 + 0.692308 NA Intergenic Intergenic -17083 NM_001039348 2202 Hs.76224 NM_004105 ENSG00000115380 EFEMP1 DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 EGF containing fibulin extracellular matrix protein 1 protein-coding 201.462-2 chr5 128389751 128390321 + 0.692308 NA intron (NM_001999, intron 11 of 64) intron (NM_001999, intron 11 of 64) 148209 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding 185.692 chr6 170602535 170602887 + 0.692308 NA Intergenic MER92-int|LTR|ERV1 -18019 NM_001199461 5134 Hs.367900 NM_002598 ENSG00000071994 PDCD2 RP8|ZMYND7 programmed cell death 2 protein-coding 191.308-4 chr20 7092206 7092640 + 0.692308 NA Intergenic ERVL-E-int|LTR|ERVL 161779 NR_110609 101929265 Hs.637730 NR_110609 ENSG00000228888 LINC01428 - long intergenic non-protein coding RNA 1428 ncRNA 162.231-5 chr22 35484696 35485006 + 0.692308 NA Intergenic Intergenic -55643 NM_001366725 23551 Hs.474711 NM_014310 ENSG00000100302 RASD2 Rhes|TEM2 RASD family member 2 protein-coding 268.307 chr2 33036795 33037548 + 0.692308 NA intron (NM_206943, intron 3 of 33) L1ME3D|LINE|L1 90218 NM_206943 4052 Hs.619315 NM_000627 ENSG00000049323 LTBP1 - latent transforming growth factor beta binding protein 1 protein-coding 152.692-5 chr4 19659542 19659863 + 0.692308 NA Intergenic Intergenic -592203 NM_001289136 9353 Hs.29802 NM_004787 ENSG00000145147 SLIT2 SLIL3|Slit-2 slit guidance ligand 2 protein-coding 177.231-6 chr4 57513401 57513718 + 0.692308 NA Intergenic Intergenic 87687 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 157.846 chr1 27970121 27970394 + 0.692308 NA TTS (NM_001990) TTS (NM_001990) 10795 NM_018053 55113 Hs.55024 NM_018053 ENSG00000158156 XKR8 XRG8|hXkr8 XK related 8 protein-coding 154.385-6 chr5 65586431 65586883 + 0.692308 NA intron (NM_001278929, intron 9 of 9) intron (NM_001278929, intron 9 of 9) 23361 NM_015342 23398 Hs.121432 NM_015342 ENSG00000113593 PPWD1 - peptidylprolyl isomerase domain and WD repeat containing 1 protein-coding 169.615-10 chr6 48065957 48066604 + 0.692308 NA intron (NM_207499, intron 1 of 2) intron (NM_207499, intron 1 of 2) 2409 NM_001013732 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 187.769-2 chr3 176680921 176681504 + 0.692308 NA Intergenic L1PA8A|LINE|L1 -45680 NR_109968 100505547 Hs.253350 NR_109968 LINC01208 - long intergenic non-protein coding RNA 1208 ncRNA 196.615-3 chr12 6804233 6804633 + 0.692308 NA intron (NM_000616, intron 3 of 9) L1MD1|LINE|L1 14905 NM_001195016 920 Hs.631659 NM_000616 ENSG00000010610 CD4 CD4mut CD4 molecule protein-coding 162-8 chr4 58239644 58239959 + 0.692308 NA Intergenic Tigger13a|DNA|TcMar-Tigger 296527 NR_133943 105377671 Hs.225045 NR_133943 ENSG00000250340 LINC02494 - long intergenic non-protein coding RNA 2494 ncRNA 174.231-5 chr2 138997102 138997633 + 0.692308 NA Intergenic MIR3|SINE|MIR 100043 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 156.231-6 chr6 35938124 35938462 + 0.692308 NA Intergenic FLAM_C|SINE|Alu -17113 NR_034069 6732 Hs.443861 NM_003137 ENSG00000096063 SRPK1 SFRSK1 SRSF protein kinase 1 protein-coding 178.385-12 chr5 92491971 92492267 + 0.692308 NA Intergenic Intergenic 1079224 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 175.846-6 chr7 40655756 40656130 + 0.692308 NA intron (NM_001193312, intron 11 of 12) intron (NM_001193312, intron 11 of 12) 323996 NR_110831 101928744 Hs.639767 NR_110831 ENSG00000232458 LINC01450 - long intergenic non-protein coding RNA 1450 ncRNA 193.769-4 chr13 82588017 82588505 + 0.692308 NA Intergenic Intergenic 1294132 NM_052910 114798 Hs.415478 NM_052910 ENSG00000178235 SLITRK1 LRRC12|TTM SLIT and NTRK like family member 1 protein-coding 155.077-9 chr16 71794951 71795249 + 0.692308 NA intron (NM_001128, intron 1 of 22) intron (NM_001128, intron 1 of 22) 13734 NM_001030007 164 Hs.461253 NM_001128 ENSG00000166747 AP1G1 ADTG|CLAPG1 adaptor related protein complex 1 subunit gamma 1 protein-coding 162-7 chr2 213246837 213247259 + 0.692308 NA Intergenic Intergenic 37161 NR_144752 100130451 Hs.608433 NR_144752 SPAG16-DT - SPAG16 divergent transcript ncRNA 161.462-5 chr6 38476286 38476788 + 0.692308 NA intron (NM_001172418, intron 5 of 10) intron (NM_001172418, intron 5 of 10) -5059 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 170.308 chr1 59842389 59842744 + 0.692308 NA intron (NM_015888, intron 8 of 21) intron (NM_015888, intron 8 of 21) 27617 NM_015888 51361 Hs.378836 NM_015888 ENSG00000134709 HOOK1 HK1 hook microtubule tethering protein 1 protein-coding 171.923-4 chr4 86269704 86270046 + 0.692308 NA intron (NM_001363657, intron 2 of 13) intron (NM_001363657, intron 2 of 13) 84769 NM_001318067 5602 Hs.13438 NM_002753 ENSG00000109339 MAPK10 JNK3|JNK3A|PRKM10|SAPK1b|p493F12|p54bSAPK mitogen-activated protein kinase 10 protein-coding 164.154-4 chr7 7705983 7706576 + 0.692308 NA intron (NM_002947, intron 2 of 7) intron (NM_002947, intron 2 of 7) 12328 NM_002947 6119 Hs.487540 NM_002947 ENSG00000106399 RPA3 REPA3|RP-A p14 replication protein A3 protein-coding 154.769 chr1 14501604 14501902 + 0.692308 NA Intergenic L1MB7|LINE|L1 -81780 NR_149058 105376762 Hs.568591 NR_149058 KAZN-AS1 - KAZN antisense RNA 1 ncRNA 200.538 chr11 11357787 11358133 + 0.692308 NA intron (NM_198516, intron 6 of 10) intron (NM_198516, intron 6 of 10) -4710 NM_001256686 283106 Hs.654675 NM_001256686 ENSG00000254598 CSNK2A3 CSNK2A1P casein kinase 2 alpha 3 protein-coding 163.462 chr11 16072212 16072481 + 0.692308 NA intron (NM_017508, intron 8 of 14) L1PA15|LINE|L1 -102725 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA 153-3 chr2 44344052 44344408 + 0.692308 NA intron (NM_006036, intron 3 of 13) intron (NM_006036, intron 3 of 13) 15519 NM_001042385 9581 Hs.444349 NM_006036 ENSG00000138078 PREPL CMS22 prolyl endopeptidase like protein-coding 173.692-2 chr5 42807054 42807441 + 0.692308 NA intron (NM_001085486, intron 3 of 5) intron (NM_001085486, intron 3 of 5) 4645 NM_005410 6414 Hs.275775 NM_005410 ENSG00000250722 SELENOP SELP|SEPP|SEPP1|SeP selenoprotein P protein-coding 185-2 chr17 58730798 58731065 + 0.692308 NA intron (NM_058216, intron 7 of 8) L1MB3|LINE|L1 -24923 NM_014906 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding 169.231-3 chr16 55355426 55355889 + 0.692308 NA Intergenic L1MC4a|LINE|L1 31098 NM_024335 79190 Hs.369907 NM_024335 ENSG00000159387 IRX6 IRX-3|IRX7|IRXB3 iroquois homeobox 6 protein-coding 164.769-8 chr7 82510781 82511187 + 0.692308 NA Intergenic L1MEg|LINE|L1 -67028 NM_001366867 781 Hs.282151 NM_000722 ENSG00000153956 CACNA2D1 CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3 calcium voltage-gated channel auxiliary subunit alpha2delta 1 protein-coding 162.846-5 chr20 48544585 48544873 + 0.692308 NA Intergenic MIR|SINE|MIR 184818 NR_026958 284749 Hs.299080 NR_026958 ENSG00000235621 LINC00494 - long intergenic non-protein coding RNA 494 ncRNA 156.923-14 chr3 67426234 67426647 + 0.692308 NA intron (NM_001177599, intron 9 of 10) MamRep434|DNA|TcMar-Tigger 200976 NR_036234 100422941 NR_036234 ENSG00000283298 MIR4272 - microRNA 4272 ncRNA 153-5 chr20 43050809 43051243 + 0.692308 NA intron (NM_133170, intron 1 of 31) MLT1K|LTR|ERVL-MaLR 82283 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA 202.154-6 chr2 237049056 237049806 + 0.692308 NA non-coding (NR_135202, exon 6 of 7) non-coding (NR_135202, exon 6 of 7) 6736 NR_135202 93463 Hs.652810 NR_135202 ENSG00000124835 LOC93463 - uncharacterized LOC93463 ncRNA 169.769-5 chr20 42901494 42901835 + 0.692308 NA intron (NM_133170, intron 1 of 31) intron (NM_133170, intron 1 of 31) -67079 NR_149017 101927138 Hs.666740 NR_149017 ENSG00000227599 LOC101927138 - uncharacterized LOC101927138 ncRNA 171.231 chr10 98073927 98074783 + 0.692308 NA Intergenic Intergenic -43527 NM_001206528 55118 Hs.500736 NM_018058 ENSG00000095713 CRTAC1 ASPIC|ASPIC1|CEP-68|CEP68|LOTUS cartilage acidic protein 1 protein-coding 168.462-2 chr13 42946306 42946641 + 0.692308 NA intron (NM_033255, intron 6 of 10) Tigger16b|DNA|TcMar-Tigger 45768 NM_001331228 94240 Hs.546467 NM_033255 ENSG00000133106 EPSTI1 BRESI1 epithelial stromal interaction 1 protein-coding 168.462-3 chr2 127705170 127705578 + 0.692308 NA TTS (NM_032740) TTS (NM_032740) 3877 NM_032740 84826 Hs.345849 NM_032740 ENSG00000173349 SFT2D3 - SFT2 domain containing 3 protein-coding 172.846-2 chr18 9146762 9147132 + 0.692308 NA intron (NM_001204056, intron 1 of 11) intron (NM_001204056, intron 1 of 11) 9384 NM_001204056 23253 Hs.464585 NM_015208 ENSG00000101745 ANKRD12 ANCO-2|ANCO1|GAC-1|Nbla00144 ankyrin repeat domain 12 protein-coding 171.538-9 chr8 5922809 5923290 + 0.692308 NA Intergenic L1MEg|LINE|L1 483499 NR_040040 100287015 Hs.156928 NR_040040 ENSG00000246089 LOC100287015 - uncharacterized LOC100287015 ncRNA 159.923-8 chr5 124856021 124856431 + 0.692308 NA Intergenic L2b|LINE|L2 -111114 NM_020747 57507 Hs.266616 NM_020747 ENSG00000168916 ZNF608 NY-REN-36 zinc finger protein 608 protein-coding 183-3 chr6 48751560 48751870 + 0.692308 NA Intergenic Intergenic -683026 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 164.538-7 chr2 19861776 19862104 + 0.692308 NA Intergenic Intergenic -6914 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA 161.308-15 chr8 129147001 129147407 + 0.692308 NA Intergenic MER58B|DNA|hAT-Charlie 94036 NR_033916 728724 Hs.49902 NR_033916 ENSG00000229140 LINC00977 - long intergenic non-protein coding RNA 977 ncRNA 187.385-4 chr13 36818754 36819190 + 0.692308 NA promoter-TSS (NM_000538) promoter-TSS (NM_000538) -230 NM_000538 5994 Hs.24422 NM_000538 ENSG00000133111 RFXAP - regulatory factor X associated protein protein-coding 194.769-3 chr4 100556526 100556864 + 0.692308 NA Intergenic Intergenic -38673 NM_016242 51705 Hs.152913 NM_016242 ENSG00000164035 EMCN EMCN2|MUC14 endomucin protein-coding 184-4 chr6 45631178 45631590 + 0.692308 NA Intergenic Tigger3c|DNA|TcMar-Tigger 209109 NM_001369405 860 Hs.535845 NM_004348 ENSG00000124813 RUNX2 AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA RUNX family transcription factor 2 protein-coding 271.615 chr8 121918359 121919198 + 0.692308 NA Intergenic Intergenic -277338 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 174-4 chr17 30877801 30878290 + 0.692308 NA exon (NM_024857, exon 17 of 23) exon (NM_024857, exon 17 of 23) 28193 NM_024683 79736 Hs.317340 NM_024683 ENSG00000172171 TEFM C17orf42 transcription elongation factor, mitochondrial protein-coding 166.769 chr10 65564278 65564654 + 0.692308 NA Intergenic Intergenic -6959 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 155.154-2 chr3 147167230 147167616 + 0.692308 NA Intergenic Tigger1|DNA|TcMar-Tigger 225007 NR_040762 84107 Hs.415766 NM_032153 ENSG00000174963 ZIC4 - Zic family member 4 protein-coding 174.154-10 chr9 136112680 136113071 + 0.692308 NA Intergenic Intergenic 5556 NM_001256526 90120 Hs.287411 NM_152833 ENSG00000238227 TMEM250 C9orf69 transmembrane protein 250 protein-coding 158.154-2 chr2 34551463 34551756 + 0.692308 NA Intergenic Intergenic -125948 NR_126404 104355288 Hs.624529 NR_126404 ENSG00000228262 LINC01320 - long intergenic non-protein coding RNA 1320 ncRNA 164.923-12 chr9 123572106 123572582 + 0.692308 NA intron (NM_001352968, intron 11 of 18) L1ME1|LINE|L1 -86722 NR_106972 102465688 NR_106972 ENSG00000274932 MIR7150 hsa-mir-7150 microRNA 7150 ncRNA 175.539 chr2 18966639 18967217 + 0.692308 NA Intergenic L1PA16|LINE|L1 60043 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA 173-3 chr5 24198333 24198793 + 0.692308 NA Intergenic L1MC2|LINE|L1 247215 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA 241.154 chr2 114814081 114814501 + 0.692308 NA intron (NM_001321910, intron 2 of 26) intron (NM_001321910, intron 2 of 26) 19257 NR_132105 101927591 Hs.553019 NR_132105 ENSG00000231538 DPP10-AS3 - DPP10 antisense RNA 3 ncRNA 173.462 chr16 10055995 10056361 + 0.692308 NA intron (NM_001134408, intron 2 of 13) intron (NM_001134408, intron 2 of 13) 125889 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding 186.615-2 chr7 23394302 23394834 + 0.692308 NA intron (NM_006547, intron 3 of 14) intron (NM_006547, intron 3 of 14) -1878 NR_145734 109616981 NR_145734 ENSG00000212264 SNORD65C - small nucleolar RNA, C/D box 65C snoRNA 163.231-12 chr8 104476209 104476789 + 0.692308 NA Intergenic Intergenic 7966 NR_030330 693127 NR_030330 ENSG00000208032 MIR548A3 MIRN548A3 microRNA 548a-3 ncRNA 164.077-5 chr8 131154690 131155059 + 0.692308 NA Intergenic Intergenic -113965 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 176.538-4 chr18 6190131 6190553 + 0.692308 NA intron (NM_001365769, intron 12 of 16) L1ME3|LINE|L1 -66402 NR_110765 101927150 NR_110765 L3MBTL4-AS1 - L3MBTL4 antisense RNA 1 ncRNA 161.385 chr1 169014058 169014380 + 0.692308 NA intron (NR_104091, intron 3 of 4) MLT1B|LTR|ERVL-MaLR 72786 NR_104091 101978719 Hs.517849 NR_104091 ENSG00000203601 LINC00970 - long intergenic non-protein coding RNA 970 ncRNA 183.615-10 chr8 83951156 83951714 + 0.692308 NA Intergenic Intergenic -231352 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 152.231-4 chr9 3346152 3346530 + 0.692308 NA intron (NM_134428, intron 4 of 17) intron (NM_134428, intron 4 of 17) 49255 NM_002919 5991 Hs.136829 NM_002919 ENSG00000080298 RFX3 - regulatory factor X3 protein-coding 170.538-2 chr10 81615836 81616353 + 0.692308 NA Intergenic L1M2|LINE|L1 -259100 NM_001370084 10718 Hs.125119 NM_001010848 ENSG00000185737 NRG3 HRG3|pro-NRG3 neuregulin 3 protein-coding 159.692-8 chr6 133449434 133449787 + 0.692308 NA intron (NM_001301013, intron 5 of 19) MIRb|SINE|MIR 208111 NM_001301012 2070 Hs.596680 NM_004100 ENSG00000112319 EYA4 CMD1J|DFNA10 EYA transcriptional coactivator and phosphatase 4 protein-coding 153.615-2 chr3 178338430 178338810 + 0.692308 NA Intergenic L1MEg|LINE|L1 -80581 NR_046786 100874330 Hs.201902 NR_046786 ENSG00000223941 LINC01014 KCNMB2-IT1 long intergenic non-protein coding RNA 1014 ncRNA 211.615 chr4 57925780 57926319 + 0.692308 NA Intergenic Intergenic 500177 NR_125907 101928851 Hs.555072 NR_125907 ENSG00000248505 LINC02380 - long intergenic non-protein coding RNA 2380 ncRNA 158.923-8 chr4 93921199 93921577 + 0.692308 NA Intergenic Intergenic 92635 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding 157.077-12 chr8 132108039 132108393 + 0.692308 NA Intergenic MIR|SINE|MIR -2951 NM_001145095 10086 Hs.285026 NM_005712 ENSG00000132297 HHLA1 PLA2L HERV-H LTR-associating 1 protein-coding 215.692 chr2 184619222 184619810 + 0.692308 NA intron (NM_194250, intron 1 of 3) intron (NM_194250, intron 1 of 3) 20987 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding 166.385 chr18 64447992 64448286 + 0.692308 NA Intergenic Intergenic -188084 NR_033983 400654 Hs.434235 NR_033983 ENSG00000266952 LINC01538 - long intergenic non-protein coding RNA 1538 ncRNA 156.615-3 chr13 88849553 88849907 + 0.692308 NA Intergenic Intergenic 222877 NR_047490 100861553 Hs.560132 NR_047490 ENSG00000261666 LINC00560 - long intergenic non-protein coding RNA 560 ncRNA 186.385-5 chr20 55458102 55458617 + 0.692308 NA Intergenic MIRb|SINE|MIR -31162 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA 201-2 chr11 132848080 132848506 + 0.692308 NA intron (NM_001319104, intron 1 of 6) intron (NM_001319104, intron 1 of 6) 95344 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding 179.769 chr10 20651280 20651672 + 0.692308 NA Intergenic L2|LINE|L2 99506 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA 160.154-6 chr12 79781443 79782095 + 0.692308 NA intron (NM_001244990, intron 23 of 24) intron (NM_001244990, intron 23 of 24) -90672 NM_001354733 5074 Hs.643130 NM_002583 ENSG00000177425 PAWR PAR4|Par-4 pro-apoptotic WT1 regulator protein-coding 234.846 chr1 58279315 58279733 + 0.692308 NA Intergenic MIRb|SINE|MIR -28977 NM_001353980 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 156.923-3 chr12 24365636 24366032 + 0.692308 NA intron (NM_152989, intron 3 of 17) intron (NM_152989, intron 3 of 17) 142563 NR_120473 101928471 Hs.569156 NR_120472 ENSG00000256120 SOX5-AS1 - SOX5 antisense RNA 1 ncRNA 154.615-15 chr9 108200431 108200708 + 0.692308 NA Intergenic L1MA1|LINE|L1 655417 NM_006686 10880 Hs.534390 NM_006686 ENSG00000148156 ACTL7B Tact1 actin like 7B protein-coding 185.231-4 chr20 62406177 62406528 + 0.692308 NA intron (NM_031215, intron 1 of 9) intron (NM_031215, intron 1 of 9) 931 NM_031215 81928 Hs.301040 NM_031215 ENSG00000149679 CABLES2 C20orf150|dJ908M14.2|ik3-2 Cdk5 and Abl enzyme substrate 2 protein-coding 166.538-2 chr3 181050083 181050454 + 0.692308 NA Intergenic L1MEc|LINE|L1 -6412 NR_075091 347689 Hs.654932 NR_004053 SOX2-OT NCRNA00043|SOX2OT SOX2 overlapping transcript ncRNA 187.615 chr1 63176752 63177118 + 0.692308 NA intron (NR_038252, intron 6 of 11) Tigger1|DNA|TcMar-Tigger 140322 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA 207.308-3 chr12 130413996 130414322 + 0.692308 NA exon (NM_001351227, exon 16 of 21) exon (NM_001351227, exon 16 of 21) 76272 NM_004764 9271 Hs.405659 NM_004764 ENSG00000125207 PIWIL1 CT80.1|HIWI|MIWI|PIWI piwi like RNA-mediated gene silencing 1 protein-coding 184.384 chr4 61828590 61829127 + 0.692308 NA intron (NM_001371343, intron 9 of 23) intron (NM_001371343, intron 9 of 23) 332907 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 219-2 chr4 147177110 147177659 + 0.692308 NA Intergenic L1MD|LINE|L1 167333 NR_031662 100313938 NR_031662 ENSG00000221369 MIR548G MIRN548G|hsa-mir-548g microRNA 548g ncRNA 234.154-3 chr14 46072196 46072756 + 0.692308 NA intron (NR_102702, intron 1 of 3) L2b|LINE|L2 8317 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 161.308-7 chr19 11794493 11794783 + 0.692308 NA Intergenic MER41C|LTR|ERV1 -3885 NM_152356 126069 Hs.631634 NM_152356 ENSG00000177599 ZNF491 - zinc finger protein 491 protein-coding 153.692-9 chr6 35211326 35211617 + 0.692308 NA Intergenic Intergenic -2485 NM_152753 222663 Hs.12923 NM_152753 ENSG00000146197 SCUBE3 CEGF3 signal peptide, CUB domain and EGF like domain containing 3 protein-coding 221.154 chr2 107766989 107767780 + 0.692308 NA intron (NR_126370, intron 2 of 4) intron (NR_126370, intron 2 of 4) 13272 NR_126370 104326057 Hs.585967 NR_126369 ENSG00000232991 GACAT1 LINC00876 gastric cancer associated transcript 1 ncRNA 168.846-2 chr18 68903597 68903840 + 0.692308 NA intron (NM_001093729, intron 8 of 9) intron (NM_001093729, intron 8 of 9) 105638 NM_024781 79839 Hs.280781 NM_024781 ENSG00000150636 CCDC102B ACY1L|AN|C18orf14|HsT1731 coiled-coil domain containing 102B protein-coding 160.308-2 chr1 210439076 210439459 + 0.692308 NA intron (NM_001122834, intron 7 of 11) ERVL-B4-int|LTR|ERVL 109901 NM_001170580 55733 Hs.58650 NM_018194 ENSG00000054392 HHAT MART2|SKI1|Skn hedgehog acyltransferase protein-coding 160.385-4 chr2 189269111 189269386 + 0.692308 NA Intergenic Plat_L3|LINE|CR1 -89487 NM_000393 1290 Hs.445827 NM_000393 ENSG00000204262 COL5A2 EDSC|EDSCL2 collagen type V alpha 2 chain protein-coding 191.462 chr2 78607113 78607441 + 0.692308 NA Intergenic Intergenic 61746 NR_136312 105374820 Hs.570225 NR_136311 LOC105374820 - uncharacterized LOC105374820 ncRNA 181.615-3 chr15 73433447 73433753 + 0.692308 NA Intergenic L1MEi|LINE|L1 -9564 NM_001042367 283677 Hs.743574 NM_001042367 ENSG00000183324 REC114 C15orf60|CT147 REC114 meiotic recombination protein protein-coding 166.154 chr14 58535734 58536186 + 0.692308 NA intron (NM_001329945, intron 29 of 29) intron (NM_001329945, intron 29 of 29) 96279 NM_001244193 9786 Hs.232532 NM_014749 ENSG00000100578 KIAA0586 JBTS23|SRTD14|Talpid3 KIAA0586 protein-coding 186.385-4 chr1 216018588 216019085 + 0.692308 NA intron (NM_206933, intron 32 of 71) L1M5|LINE|L1 -53629 NR_125993 102723833 Hs.232072 NR_125992 ENSG00000233620 LOC102723833 - uncharacterized LOC102723833 ncRNA 179.692-7 chr7 84101212 84101641 + 0.692308 NA intron (NM_006080, intron 4 of 16) intron (NM_006080, intron 4 of 16) 93363 NM_006080 10371 Hs.252451 NM_006080 ENSG00000075213 SEMA3A COLL1|HH16|Hsema-I|Hsema-III|SEMA1|SEMAD|SEMAIII|SEMAL|SemD|coll-1 semaphorin 3A protein-coding 173.308-4 chr6 162980412 162980838 + 0.692308 NA intron (NM_001080379, intron 2 of 4) intron (NM_001080379, intron 2 of 4) 73536 NR_110871 101929239 Hs.571035 NR_110871 ENSG00000225437 PACRG-AS2 - PACRG antisense RNA 2 ncRNA 161.154-7 chr7 14399840 14400286 + 0.692308 NA intron (NM_001350717, intron 20 of 24) intron (NM_001350717, intron 20 of 24) -408638 NM_001163148 2115 Hs.22634 NM_004956 ENSG00000006468 ETV1 ER81 ETS variant 1 protein-coding 181.769-3 chr5 162701895 162702474 + 0.692308 NA Intergenic Intergenic 634542 NM_000816 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 168.538-2 chr10 60822649 60823022 + 0.692308 NA Intergenic Charlie1a|DNA|hAT-Charlie 44357 NM_001786 983 Hs.732435 NM_001786 ENSG00000170312 CDK1 CDC2|CDC28A|P34CDC2 cyclin dependent kinase 1 protein-coding 185.231-7 chr7 54633125 54633467 + 0.692308 NA Intergenic Intergenic 76326 NR_038994 285878 Hs.335933 NR_038994 ENSG00000224223 VSTM2A-OT1 GS1-18A18.1 VSTM2A overlapping transcript 1 ncRNA 168.308-9 chr7 70133072 70133484 + 0.692308 NA intron (NM_015570, intron 3 of 18) intron (NM_015570, intron 3 of 18) 534803 NM_001127232 26053 Hs.21631 NM_015570 ENSG00000158321 AUTS2 FBRSL2|MRD26 activator of transcription and developmental regulator AUTS2 protein-coding 188.539 chr18 21449673 21449989 + 0.692308 NA exon (NM_001142966, exon 12 of 33) exon (NM_001142966, exon 12 of 33) 150873 NM_052911 114799 Hs.464733 NM_052911 ENSG00000141446 ESCO1 A930014I12Rik|CTF|ECO1|EFO1|ESO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein-coding 176.154-4 chr13 59222556 59222921 + 0.692308 NA Intergenic MER94|DNA|hAT-Blackjack -789980 NR_109838 100874195 Hs.664101 NR_046539 ENSG00000227528 DIAPH3-AS1 - DIAPH3 antisense RNA 1 ncRNA 165.461-3 chr8 117241314 117241874 + 0.692308 NA Intergenic Intergenic 106599 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 167.538-8 chr4 71459187 71459513 + 0.692308 NA intron (NM_003759, intron 9 of 22) HAL1b|LINE|L1 120297 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding 158.692-3 chr2 77838866 77839182 + 0.692308 NA intron (NR_110288, intron 3 of 3) LTR49-int|LTR|ERV1 -76910 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA 159.846-3 chr14 56651158 56651410 + 0.692308 NA Intergenic Intergenic 71486 NM_017799 54916 Hs.497253 NM_017799 ENSG00000070269 TMEM260 C14orf101|SHDRA transmembrane protein 260 protein-coding 157.384-2 chr4 104527541 104527946 + 0.692308 NA intron (NR_125926, intron 1 of 9) L1PA11|LINE|L1 -32849 NR_132741 80319 Hs.12248 NM_025212 ENSG00000168772 CXXC4 IDAX CXXC finger protein 4 protein-coding 187.692-6 chr8 92505043 92505389 + 0.692308 NA Intergenic Intergenic 150278 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 210.308 chr12 15287483 15288092 + 0.692308 NA Intergenic L1MEc|LINE|L1 -34721 NM_030667 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding 157.154-2 chr11 59997680 59998054 + 0.692308 NA Intergenic Intergenic -25936 NM_001368161 107987155 NM_001368161 ENSG00000255393 OOSP4B - oocyte secreted protein family member 4B protein-coding 182.308-2 chr10 57439538 57440001 + 0.692308 NA Intergenic L1MB3|LINE|L1 -135210 NR_037490 100500834 NR_037490 ENSG00000264747 MIR3924 - microRNA 3924 ncRNA 167.385-7 chr6 6486482 6486855 + 0.692308 NA intron (NR_026970, intron 3 of 7) intron (NR_026970, intron 3 of 7) -102052 NM_004271 9450 Hs.653138 NM_004271 ENSG00000112799 LY86 MD-1|MD1|MMD-1|dJ80N2.1 lymphocyte antigen 86 protein-coding 207.616 chr13 106166170 106166864 + 0.692308 NA Intergenic Intergenic -210047 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA 169.615-4 chr2 105089286 105089741 + 0.692308 NA intron (NM_182640, intron 6 of 10) intron (NM_182640, intron 6 of 10) 13431 NR_110227 101927492 Hs.469537 NR_110227 ENSG00000231851 UTAT33 - uncharacterized LOC101927492 ncRNA 170.923-5 chr5 26545880 26546165 + 0.692308 NA Intergenic Intergenic 492564 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 153.077 chr10 82105832 82106112 + 0.692308 NA intron (NR_163253, intron 2 of 10) intron (NR_163253, intron 2 of 10) 126948 NR_120666 101929590 Hs.733268 NR_120666 ENSG00000225738 NRG3-AS1 C10orf100|Em:AC010157.1 NRG3 antisense RNA 1 ncRNA 154.385-2 chr1 111120630 111120980 + 0.692308 NA intron (NR_146306, intron 5 of 8) intron (NR_146306, intron 5 of 8) -18578 NM_001007794 10390 Hs.363572 NM_006090 ENSG00000134255 CEPT1 - choline/ethanolamine phosphotransferase 1 protein-coding 225.231-2 chr7 34080852 34081306 + 0.692308 NA intron (NM_133468, intron 13 of 15) intron (NM_133468, intron 13 of 15) 175540 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding 187.615-4 chr5 24882781 24883339 + 0.692308 NA Intergenic Intergenic -42477 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA 163.154-3 chr2 146489414 146489728 + 0.692308 NA Intergenic L1ME2|LINE|L1 -97486 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 155.462-7 chr8 71484948 71485291 + 0.692308 NA intron (NM_001370334, intron 2 of 19) intron (NM_001370334, intron 2 of 19) 62585 NM_001370334 2138 Hs.444971 NM_000503 ENSG00000104313 EYA1 BOP|BOR|BOS1|OFC1 EYA transcriptional coactivator and phosphatase 1 protein-coding 181 chr20 10074808 10075283 + 0.692308 NA intron (NR_040710, intron 3 of 4) intron (NR_040710, intron 3 of 4) 40058 NM_022096 63926 Hs.70903 NM_022096 ENSG00000132623 ANKEF1 ANKRD5 ankyrin repeat and EF-hand domain containing 1 protein-coding 161.308-6 chr17 26649404 26649650 + 0.692308 NA Intergenic ALR/Alpha|Satellite|centr 439714 NR_135673 105371703 Hs.649918 NR_135673 LOC105371703 - uncharacterized LOC105371703 ncRNA 152.538-4 chr4 156995638 156995985 + 0.692308 NA Intergenic Intergenic -24012 NR_036641 56034 Hs.570855 NM_016205 ENSG00000145431 PDGFC FALLOTEIN|SCDGF platelet derived growth factor C protein-coding 208.846-2 chr7 55460376 55460844 + 0.692308 NA Intergenic L1MA4A|LINE|L1 66270 NM_001321251 81552 Hs.488307 NM_030796 ENSG00000154978 VOPP1 ECOP|GASP|WBP1L2 VOPP1 WW domain binding protein protein-coding 169-5 chr18 65687757 65688220 + 0.692308 NA Intergenic MER6A|DNA|TcMar-Tigger -62264 NM_033646 1005 Hs.541003 NM_004361 ENSG00000081138 CDH7 CDH7L1 cadherin 7 protein-coding 154.923-4 chr11 102536028 102536312 + 0.692308 NA Intergenic L1MB4|LINE|L1 -5423 NM_002423 4316 Hs.2256 NM_002423 ENSG00000137673 MMP7 MMP-7|MPSL1|PUMP-1 matrix metallopeptidase 7 protein-coding 170.077-3 chr19 45956830 45957213 + 0.692308 NA intron (NM_002516, intron 2 of 3) intron (NM_002516, intron 2 of 3) 16844 NM_002516 4858 Hs.375439 NM_002516 ENSG00000104967 NOVA2 ANOVA|NOVA3 NOVA alternative splicing regulator 2 protein-coding 157.077-7 chr2 123763094 123763457 + 0.692308 NA Intergenic Intergenic 261899 NR_147976 107985820 Hs.637705 NR_147976 LOC107985820 - uncharacterized LOC107985820 ncRNA 173.538-3 chr10 34201621 34202252 + 0.692308 NA intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -429256 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 179.308 chr11 106626836 106627446 + 0.692308 NA Intergenic Intergenic 375734 NR_120551 101928535 Hs.409078 NR_120551 ENSG00000254811 LOC101928535 - uncharacterized LOC101928535 ncRNA 155.308-2 chr11 95300084 95300450 + 0.692308 NA Intergenic Intergenic -67792 NM_001271594 143686 Hs.120633 NM_144665 ENSG00000149212 SESN3 SEST3 sestrin 3 protein-coding 218.769-2 chr5 157006575 157007342 + 0.692308 NA Intergenic MSTB|LTR|ERVL-MaLR -43732 NM_138379 91937 Hs.334907 NM_138379 ENSG00000145850 TIMD4 SMUCKLER|TIM4 T cell immunoglobulin and mucin domain containing 4 protein-coding 235.154 chr2 162440280 162440790 + 0.692308 NA intron (NM_033272, intron 7 of 15) intron (NM_033272, intron 7 of 15) 96167 NM_001330270 25801 Hs.377894 NM_012198 ENSG00000115271 GCA GCL grancalcin protein-coding 178-3 chr7 48736953 48737428 + 0.692308 NA Intergenic Intergenic -187357 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 164.769-3 chr14 57073059 57073451 + 0.692308 NA Intergenic Intergenic 195650 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding 155.538-2 chr1 228095561 228095900 + 0.692308 NA intron (NM_001024227, intron 1 of 4) intron (NM_001024227, intron 1 of 4) -1533 NR_037415 100500810 NR_037415 ENSG00000284163 MIR3620 mir-3620 microRNA 3620 ncRNA 198.923-6 chr8 14132353 14132826 + 0.692308 NA intron (NM_001322880, intron 4 of 6) L1MB4|LINE|L1 502899 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 199.615-5 chr5 162207862 162208313 + 0.692308 NA Intergenic Tigger17a|DNA|TcMar-Tigger 140445 NM_000816 2566 Hs.7195 NM_000816 ENSG00000113327 GABRG2 CAE2|ECA2|EIEE74|FEB8|GEFSP3 gamma-aminobutyric acid type A receptor gamma2 subunit protein-coding 155.769-12 chr9 28523845 28524326 + 0.692308 NA intron (NM_152570, intron 2 of 6) L1MB8|LINE|L1 195220 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 193.539 chr20 54944002 54944349 + 0.692308 NA Intergenic L1ME1|LINE|L1 468582 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 158.769-9 chr5 86365864 86366192 + 0.692308 NA Intergenic Intergenic 83584 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 262.846 chr3 116393738 116394562 + 0.692308 NA intron (NM_001318915, intron 1 of 8) intron (NM_001318915, intron 1 of 8) 34126 NR_109998 101926903 Hs.26479 NR_109998 ENSG00000240922 LSAMP-AS1 - LSAMP antisense RNA 1 ncRNA 168.769-2 chr1 174639452 174639878 + 0.692308 NA intron (NM_001366446, intron 14 of 25) intron (NM_001366446, intron 14 of 25) -60874 NM_001366450 9910 Hs.585378 NM_014857 ENSG00000152061 RABGAP1L HHL|TBC1D18 RAB GTPase activating protein 1 like protein-coding 157.462-2 chr2 225340899 225341466 + 0.692308 NA Intergenic Intergenic -58528 NM_001371273 175.154-6 chr4 93451936 93452407 + 0.692308 NA intron (NM_001286838, intron 9 of 14) L2c|LINE|L2 -376582 NM_005172 474 Hs.532680 NM_005172 ENSG00000172238 ATOH1 ATH1|HATH1|MATH-1|bHLHa14 atonal bHLH transcription factor 1 protein-coding 152.077-6 chr2 120657887 120658393 + 0.692308 NA Intergenic MLT1H1|LTR|ERVL-MaLR -77728 NM_001371271 151.769-3 chr1 185595349 185595815 + 0.692308 NA intron (NR_110793, intron 2 of 3) intron (NR_110793, intron 2 of 3) 32906 NR_110793 101929093 Hs.535227 NR_110793 ENSG00000228309 LINC01350 GS1-204I12.1 long intergenic non-protein coding RNA 1350 ncRNA 171-2 chr12 118212254 118212740 + 0.692308 NA intron (NM_001346490, intron 12 of 21) intron (NM_001346490, intron 12 of 21) -21962 NM_001346496 51347 Hs.644420 NM_016281 ENSG00000135090 TAOK3 DPK|JIK|MAP3K18|hKFC-A TAO kinase 3 protein-coding 165.538-5 chr4 95766853 95767299 + 0.692308 NA Intergenic L1MA3|LINE|L1 -73017 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding 184.846-9 chr22 48984302 48984694 + 0.692308 NA Intergenic MER2|DNA|TcMar-Tigger 117728 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA 159-2 chr16 12085840 12086178 + 0.692308 NA intron (NM_032167, intron 11 of 20) AluY|SINE|Alu 109275 NM_032167 92017 Hs.458401 NM_032167 ENSG00000048471 SNX29 A-388D4.1|RUNDC2A sorting nexin 29 protein-coding 154.615-11 chr6 123780519 123780879 + 0.692308 NA Intergenic Intergenic -23147 NM_001300738 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding 157.231-8 chr6 64810722 64811113 + 0.692308 NA intron (NM_001292009, intron 22 of 43) intron (NM_001292009, intron 22 of 43) -490501 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 155.538-13 chr6 112971486 112971883 + 0.692308 NA Intergenic L1PA15|LINE|L1 461763 NR_149098 105377957 Hs.25088 NR_149098 ENSG00000232316 LINC02518 - long intergenic non-protein coding RNA 2518 ncRNA 164.923-11 chr8 67097849 67098185 + 0.692308 NA intron (NM_001364870, intron 6 of 27) intron (NM_001364870, intron 6 of 27) 14169 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding 174.923-14 chr8 26137720 26138147 + 0.692308 NA Intergenic Intergenic -92520 NM_022659 64641 Hs.491292 NM_022659 ENSG00000221818 EBF2 COE2|EBF-2|O/E-3|OE-3 EBF transcription factor 2 protein-coding 158.539 chr4 89550671 89550919 + 0.692308 NA Intergenic Intergenic -242995 NM_198281 285513 Hs.100912 NM_198281 ENSG00000185477 GPRIN3 GRIN3 GPRIN family member 3 protein-coding 195.154-3 chrX 21814361 21814757 + 0.692308 NA Intergenic LTR82B|LTR|ERVL -25058 NM_015884 51360 Hs.443490 NM_015884 ENSG00000012174 MBTPS2 BRESEK|IFAP|KFSD|KFSDX|OI19|OLMSX|S2P membrane bound transcription factor peptidase, site 2 protein-coding 194.154-2 chr1 207297824 207298171 + 0.692308 NA Intergenic Intergenic -23681 NM_001114752 1604 Hs.126517 NM_000574 ENSG00000196352 CD55 CHAPLE|CR|CROM|DAF|TC CD55 molecule (Cromer blood group) protein-coding 166.615-7 chr4 144691383 144691639 + 0.692308 NA intron (NM_022475, intron 4 of 12) intron (NM_022475, intron 4 of 12) 45355 NM_022475 64399 Hs.507991 NM_022475 ENSG00000164161 HHIP HIP hedgehog interacting protein protein-coding 208.154-2 chr3 102902019 102902368 + 0.692308 NA Intergenic Intergenic 467178 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 164.077-4 chr8 118156785 118157261 + 0.692308 NA intron (NR_146234, intron 4 of 5) intron (NR_146234, intron 4 of 5) -45204 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 177.385-6 chr6 167870604 167871312 + 0.692308 NA intron (NM_001207008, intron 3 of 31) intron (NM_001207008, intron 3 of 31) 43323 NM_001291964 4301 Hs.614974 NM_005936 ENSG00000130396 AFDN AF6|MLL-AF6|MLLT4|l-afadin afadin, adherens junction formation factor protein-coding 173.615-2 chr5 108312236 108312510 + 0.692308 NA intron (NM_001163315, intron 4 of 8) intron (NM_001163315, intron 4 of 8) 69725 NM_001163315 64839 Hs.657225 NM_022824 ENSG00000145743 FBXL17 FBXO13|Fbl17|Fbx13 F-box and leucine rich repeat protein 17 protein-coding 158.077-10 chr8 77129963 77130454 + 0.692308 NA Intergenic Intergenic -129164 NM_001172086 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 164.538-10 chr9 26787801 26788247 + 0.692308 NA Intergenic Intergenic 104778 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 178.077 chr12 133161853 133162483 + 0.692308 NA Intergenic L1M2|LINE|L1 -19327 NM_001165881 10795 Hs.124047 NM_003415 ENSG00000090612 ZNF268 HZF3 zinc finger protein 268 protein-coding 157.461-2 chr2 50349039 50349368 + 0.692308 NA intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) -1447 NM_138735 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 164.538-6 chr18 13190328 13190720 + 0.692308 NA Intergenic L1M5|LINE|L1 -28236 NM_181482 753 Hs.697787 NM_004338 ENSG00000168675 LDLRAD4 C18orf1 low density lipoprotein receptor class A domain containing 4 protein-coding 171.308-5 chr4 47431236 47431693 + 0.692308 NA Intergenic Intergenic 32238 NM_017845 54951 Hs.23956 NM_017845 ENSG00000169019 COMMD8 - COMM domain containing 8 protein-coding 205.846-5 chr6 113610058 113610501 + 0.692308 NA Intergenic THE1C|LTR|ERVL-MaLR 39796 NR_125844 101927686 Hs.402044 NR_125844 ENSG00000230943 LINC02541 - long intergenic non-protein coding RNA 2541 ncRNA 160.154-12 chr6 41327621 41327951 + 0.692308 NA Intergenic Intergenic -7822 NM_004828 9436 Hs.194721 NM_004828 ENSG00000096264 NCR2 CD336|LY95|NK-p44|NKP44|dJ149M18.1 natural cytotoxicity triggering receptor 2 protein-coding 153.923-7 chr2 147873877 147874220 + 0.692308 NA intron (NM_001278579, intron 2 of 11) intron (NM_001278579, intron 2 of 11) 29019 NM_001616 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding 206.769-4 chr3 197123287 197123678 + 0.692308 NA intron (NM_001366216, intron 10 of 23) L1M5|LINE|L1 60390 NR_158766 1739 Hs.292549 NM_004087 ENSG00000075711 DLG1 DLGH1|SAP-97|SAP97|hdlg discs large MAGUK scaffold protein 1 protein-coding 181.846-7 chr5 116631552 116632194 + 0.692308 NA Intergenic Intergenic -57050 NM_001300780 57556 Hs.156967 NM_020681 ENSG00000092421 SEMA6A HT018|SEMA|SEMA6A1|SEMAQ|VIA semaphorin 6A protein-coding 158.231-3 chr14 66947163 66947659 + 0.692308 NA intron (NM_020806, intron 8 of 22) L2c|LINE|L2 -242029 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 155.231-10 chr6 129506646 129507119 + 0.692308 NA intron (NM_000426, intron 61 of 64) intron (NM_000426, intron 61 of 64) 203295 NM_033515 93663 Hs.486458 NM_033515 ENSG00000146376 ARHGAP18 MacGAP|SENEX|bA307O14.2 Rho GTPase activating protein 18 protein-coding 197.308-3 chr3 175130193 175130801 + 0.692308 NA intron (NM_207015, intron 2 of 13) L1MA9|LINE|L1 -15255 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA 163.615-4 chr17 54702771 54703099 + 0.692308 NA Intergenic Intergenic -197756 NM_001321175 10040 Hs.153504 NM_005486 ENSG00000141198 TOM1L1 SRCASM target of myb1 like 1 membrane trafficking protein protein-coding 158-3 chr10 23810755 23811006 + 0.692308 NA intron (NM_001098500, intron 1 of 18) (TATATAT)n|Simple_repeat|Simple_repeat 116153 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 178.615-5 chr5 81966231 81966624 + 0.692308 NA Intergenic AluY|SINE|Alu -5596 NM_001131028 83734 Hs.713698 NM_031482 ENSG00000152348 ATG10 APG10|APG10L|pp12616 autophagy related 10 protein-coding 151.615-3 chr12 61057021 61057425 + 0.692308 NA Intergenic Tigger1|DNA|TcMar-Tigger 1135616 NM_178539 338811 Hs.269745 NM_178539 ENSG00000198673 TAFA2 FAM19A2|TAFA-2 TAFA chemokine like family member 2 protein-coding 162.462-2 chr11 78992469 78992990 + 0.692308 NA intron (NM_001098816, intron 6 of 33) intron (NM_001098816, intron 6 of 33) 409380 NR_030598 100126333 NR_030598 ENSG00000211997 MIR708 MIRN708|hsa-mir-708 microRNA 708 ncRNA 167.385-2 chr11 43593661 43594075 + 0.692308 NA Intergenic Intergenic 12474 NR_029697 406918 NR_029697 ENSG00000199077 MIR129-2 MIR-129b|MIRN129-2|mir-129-2 microRNA 129-2 ncRNA 180.461-2 chrX 75149663 75150067 + 0.692308 NA intron (NM_001271699, intron 1 of 14) L2c|LINE|L2 6418 NM_001271699 22 Hs.370480 NM_004299 ENSG00000131269 ABCB7 ABC7|ASAT|Atm1p|EST140535 ATP binding cassette subfamily B member 7 protein-coding 209.154-3 chr6 48128421 48128999 + 0.692308 NA Intergenic Intergenic -60021 NM_207499 442213 Hs.659409 NM_207499 ENSG00000244694 PTCHD4 C6orf138|PTCH53|dJ402H5.2 patched domain containing 4 protein-coding 200.769-4 chr3 190330599 190330954 + 0.692308 NA Intergenic Intergenic -8330 NM_021101 9076 Hs.439060 NM_021101 ENSG00000163347 CLDN1 CLD1|ILVASC|SEMP1 claudin 1 protein-coding 216.385-2 chr7 23451362 23451824 + 0.692308 NA intron (NM_006547, intron 2 of 14) AluSq2|SINE|Alu 18898 NM_006547 10643 Hs.700696 NM_006547 ENSG00000136231 IGF2BP3 CT98|IMP-3|IMP3|KOC|KOC1|VICKZ3 insulin like growth factor 2 mRNA binding protein 3 protein-coding 194.154-6 chr5 11912888 11913263 + 0.692308 NA Intergenic L1MEf|LINE|L1 -8629 NM_001332 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 152.769-2 chr10 126508781 126509171 + 0.692308 NA intron (NM_001004298, intron 2 of 8) intron (NM_001004298, intron 2 of 8) 12517 NM_001004298 118611 Hs.587663 NM_001004298 ENSG00000154493 C10orf90 FATS|bA422P15.2 chromosome 10 open reading frame 90 protein-coding 163.308-3 chr11 73055461 73055926 + 0.692308 NA intron (NM_014824, intron 3 of 19) Charlie7a|DNA|hAT-Charlie 86625 NM_014824 9873 Hs.744959 NM_014824 ENSG00000137478 FCHSD2 NWK|NWK1|SH3MD3 FCH and double SH3 domains 2 protein-coding 159.615-9 chr8 76298793 76299251 + 0.692308 NA Intergenic L1M5|LINE|L1 -107632 NR_105006 101926978 Hs.615028 NR_105006 ENSG00000254300 LINC01111 - long intergenic non-protein coding RNA 1111 ncRNA 262.615 chr1 114300580 114301131 + 0.692308 NA Intergenic Intergenic -146986 NM_001253772 148281 Hs.370963 NM_205848 ENSG00000134207 SYT6 sytVI synaptotagmin 6 protein-coding 153-4 chr2 95336236 95336492 + 0.692308 NA intron (NM_013434, intron 2 of 8) MLT2F|LTR|ERVL -10294 NM_001034914 30818 Hs.437376 NM_013434 ENSG00000115041 KCNIP3 CSEN|DREAM|KCHIP3 potassium voltage-gated channel interacting protein 3 protein-coding 158.308-2 chr1 93891762 93892005 + 0.692308 NA intron (NM_001308253, intron 5 of 5) MIR|SINE|MIR -12677 NM_014597 30836 Hs.85769 NM_014597 ENSG00000067334 DNTTIP2 ERBP|FCF2|HSU15552|LPTS-RP2|TdIF2 deoxynucleotidyltransferase terminal interacting protein 2 protein-coding 203.538-3 chr20 59313697 59314199 + 0.692308 NA intron (NM_207032, intron 2 of 4) L2b|LINE|L2 13337 NM_207033 1908 Hs.1408 NM_000114 ENSG00000124205 EDN3 ET-3|ET3|HSCR4|PPET3|WS4B endothelin 3 protein-coding 196.154-4 chr9 37760582 37761003 + 0.692308 NA intron (NR_104612, intron 1 of 8) intron (NR_104612, intron 1 of 8) 6987 NM_001286954 158234 Hs.655614 NM_144964 ENSG00000165275 TRMT10B RG9MTD3|bA3J10.9 tRNA methyltransferase 10B protein-coding 165.231-14 chr6 34428780 34429042 + 0.692308 NA Intergenic FLAM_C|SINE|Alu -2786 NM_001202470 100529239 Hs.188882 NM_001202470 ENSG00000270800 RPS10-NUDT3 - RPS10-NUDT3 readthrough protein-coding 153.231-16 chr5 98100228 98100700 + 0.692308 NA intron (NR_146477, intron 3 of 4) L1ME5|LINE|L1 60775 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA 189.923-5 chr8 76805735 76806269 + 0.692308 NA intron (NM_024721, intron 4 of 10) intron (NM_024721, intron 4 of 10) -122727 NR_024360 100192378 Hs.596420 NR_024360 ENSG00000253661 ZFHX4-AS1 - ZFHX4 antisense RNA 1 ncRNA 160.846-5 chr2 76670633 76671079 + 0.692308 NA Intergenic Intergenic -315109 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 215.615 chr10 74462364 74462860 + 0.692308 NA intron (NM_001369124, intron 6 of 9) intron (NM_001369124, intron 6 of 9) 66712 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA 156.154-8 chr3 187135886 187136430 + 0.692308 NA intron (NM_052969, intron 1 of 2) intron (NM_052969, intron 1 of 2) 3338 NM_052969 116832 Hs.647900 NM_052969 ENSG00000163923 RPL39L L39-2|RPL39L1 ribosomal protein L39 like protein-coding 185.077-5 chr8 25143729 25144038 + 0.692308 NA Intergenic L1M5|LINE|L1 -40806 NM_024940 80005 Hs.195403 NM_024940 ENSG00000147459 DOCK5 - dedicator of cytokinesis 5 protein-coding 182.769-3 chr16 77267010 77267533 + 0.692308 NA Intergenic L1PA10|LINE|L1 67863 NM_001129979 100130958 Hs.734779 NM_001129979 ENSG00000205078 SYCE1L MRP2 synaptonemal complex central element protein 1 like protein-coding 159.615-6 chr4 143116602 143116994 + 0.692308 NA Intergenic Intergenic 68063 NR_136203 105377623 NR_136203 ENSG00000250326 LOC105377623 - uncharacterized LOC105377623 ncRNA 167.615 chr12 89191146 89191496 + 0.692308 NA Intergenic L1MA8|LINE|L1 161180 NM_022652 1848 Hs.298654 NM_001946 ENSG00000139318 DUSP6 HH19|MKP3|PYST1 dual specificity phosphatase 6 protein-coding 152.231-5 chr9 26875735 26876165 + 0.692308 NA intron (NM_001167575, intron 4 of 5) intron (NM_001167575, intron 4 of 5) 16852 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 164.692-2 chr10 92110891 92111239 + 0.692308 NA intron (NM_001178137, intron 7 of 9) intron (NM_001178137, intron 7 of 9) 132214 NM_001178137 22849 Hs.131683 NM_014912 ENSG00000107864 CPEB3 - cytoplasmic polyadenylation element binding protein 3 protein-coding 204.769-2 chr3 89726718 89727235 + 0.692308 NA Intergenic Intergenic 619355 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 205.154-3 chr8 65860228 65860645 + 0.692308 NA Intergenic L1MC2|LINE|L1 -18372 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding 182.692-2 chr7 77610145 77610546 + 0.692308 NA intron (NM_001131009, intron 8 of 16) intron (NM_001131009, intron 8 of 16) 72302 NM_001131008 5782 Hs.61812 NM_002835 ENSG00000127947 PTPN12 PTP-PEST|PTPG1 protein tyrosine phosphatase non-receptor type 12 protein-coding 157.077-10 chr3 16935976 16936235 + 0.692308 NA intron (NM_015184, intron 1 of 5) intron (NM_015184, intron 1 of 5) 2909 NR_037465 100500913 NR_037465 ENSG00000283885 MIR3714 - microRNA 3714 ncRNA 169.692-6 chr2 75932640 75933019 + 0.692308 NA Intergenic Intergenic -221914 NM_001201334 6936 Hs.303808 NM_003203 ENSG00000005436 GCFC2 C2orf3|DNABF|GCF|TCF9 GC-rich sequence DNA-binding factor 2 protein-coding 157-2 chr10 124532704 124533133 + 0.692308 NA intron (NM_022126, intron 6 of 6) MIRb|SINE|MIR 71095 NM_001318332 64077 Hs.527748 NM_022126 ENSG00000107902 LHPP HDHD2B phospholysine phosphohistidine inorganic pyrophosphate phosphatase protein-coding 229.385-2 chr2 118260658 118261130 + 0.692308 NA Intergenic Intergenic -74508 NR_144530 100506797 Hs.116176 NR_144530 ENSG00000226856 THORLNC THOR testis associated oncogenic lncRNA ncRNA 157.692 chr10 15361825 15362098 + 0.692308 NA intron (NM_001010924, intron 1 of 7) intron (NM_001010924, intron 1 of 7) 9328 NM_001010924 221061 Hs.66762 NM_001010924 ENSG00000148468 FAM171A1 APCN|C10orf38 family with sequence similarity 171 member A1 protein-coding 166.385-3 chr3 57267334 57267809 + 0.692308 NA TTS (NM_130387) TTS (NM_130387) -1995 NR_135535 105377102 Hs.745243 NR_135535 LOC105377102 - uncharacterized LOC105377102 ncRNA 164.077-2 chr2 22226049 22226361 + 0.692308 NA Intergenic L1M4|LINE|L1 -310274 NR_110577 102723362 Hs.502887 NR_110577 ENSG00000233587 LINC01884 - long intergenic non-protein coding RNA 1884 ncRNA 156.461 chr2 55050672 55051003 + 0.692308 NA promoter-TSS (NM_153828) promoter-TSS (NM_153828) -239 NM_001321860 57142 Hs.637850 NM_007008 ENSG00000115310 RTN4 ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C reticulon 4 protein-coding 153.077-4 chr4 150147102 150147383 + 0.692308 NA intron (NM_001040260, intron 2 of 15) AluJo|SINE|Alu 68797 NM_001040260 166614 Hs.591683 NM_152619 ENSG00000170390 DCLK2 CL2|CLICK-II|CLICK2|CLIK2|DCAMKL2|DCDC3|DCDC3B|DCK2 doublecortin like kinase 2 protein-coding 165.923-6 chr5 75473050 75473346 + 0.692308 NA intron (NM_031361, intron 2 of 16) AluJr4|SINE|Alu 38431 NM_005713 10087 Hs.270437 NM_005713 ENSG00000113163 CERT1 CERT|CERTL|COL4A3BP|GPBP|MRD34|STARD11 ceramide transporter 1 protein-coding 173.231-5 chr3 88300834 88301185 + 0.692308 NA Intergenic MIR|SINE|MIR -37447 NM_001368166 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding 174.077-2 chr17 73960620 73960986 + 0.692308 NA Intergenic MSTB-int|LTR|ERVL-MaLR -132266 NR_027146 283982 Hs.464079 NM_182564 LINC00469 C17orf54 long intergenic non-protein coding RNA 469 ncRNA 204.615 chr2 46499358 46499744 + 0.692308 NA Intergenic Intergenic 19986 NM_001145051 388946 Hs.733348 NM_001145051 ENSG00000284701 TMEM247 - transmembrane protein 247 protein-coding 220.923-2 chr6 42237716 42238361 + 0.692308 NA intron (NM_001297573, intron 15 of 17) intron (NM_001297573, intron 15 of 17) -20177 NM_018141 55173 Hs.380887 NM_018141 ENSG00000048544 MRPS10 MRP-S10|PNAS-122 mitochondrial ribosomal protein S10 protein-coding 171.231-6 chr9 15640465 15640903 + 0.692308 NA intron (NM_001355547, intron 6 of 24) intron (NM_001355547, intron 6 of 24) 76706 NM_001355547 203238 Hs.17267 NM_173550 ENSG00000164989 CCDC171 C9orf93|bA536D16.1|bA778P13.1 coiled-coil domain containing 171 protein-coding 158.231 chr12 11893737 11894011 + 0.692308 NA 3' UTR (NM_001987, exon 8 of 8) 3' UTR (NM_001987, exon 8 of 8) -155987 NM_001370268 79370 Hs.210343 NM_030766 ENSG00000121380 BCL2L14 BCLG BCL2 like 14 protein-coding 199.462-2 chr3 83461945 83462265 + 0.692308 NA Intergenic Intergenic 1407470 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 169.923-4 chr4 20356891 20357347 + 0.692308 NA intron (NM_001289135, intron 4 of 35) intron (NM_001289135, intron 4 of 35) -35070 NR_037876 100505893 Hs.665305 NR_037876 ENSG00000248228 SLIT2-IT1 - SLIT2 intronic transcript 1 ncRNA 153.923-4 chr18 6412599 6413056 + 0.692308 NA intron (NM_001365765, intron 1 of 18) intron (NM_001365765, intron 1 of 18) 2084 NM_001365768 91133 Hs.128279 NM_173464 ENSG00000154655 L3MBTL4 HsT1031 L3MBTL histone methyl-lysine binding protein 4 protein-coding 174.308-2 chr10 34157816 34158220 + 0.692308 NA intron (NM_001184789, intron 20 of 22) intron (NM_001184789, intron 20 of 22) -385338 NR_038932 100505583 Hs.568804 NR_038932 ENSG00000261683 LINC00838 - long intergenic non-protein coding RNA 838 ncRNA 153.692-3 chr2 57854280 57854713 + 0.692308 NA Intergenic Intergenic -53155 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 197.077-6 chr8 114259624 114260122 + 0.692308 NA Intergenic Intergenic -822934 NM_052900 114788 Hs.91381 NM_052900 ENSG00000164796 CSMD3 - CUB and Sushi multiple domains 3 protein-coding 170.077-5 chr3 176945795 176946204 + 0.692308 NA Intergenic Intergenic -128998 NR_110819 101928684 Hs.639352 NR_110819 ENSG00000228308 LINC01209 - long intergenic non-protein coding RNA 1209 ncRNA 183.462-2 chr7 39151716 39152343 + 0.692308 NA intron (NM_001370959, intron 2 of 9) intron (NM_001370959, intron 2 of 9) -138462 NR_138047 100689074 Hs.675876 NR_138047 POU6F2-AS2 - POU6F2 antisense RNA 2 ncRNA 160.769-8 chr4 59117155 59117409 + 0.692308 NA Intergenic Intergenic 103709 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 177 chr10 83650686 83651160 + 0.692308 NA Intergenic L1M5|LINE|L1 26166 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 165.692-6 chr2 116592443 116593140 + 0.692308 NA Intergenic Intergenic -1221900 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 157.154-4 chr3 83360425 83360806 + 0.692308 NA Intergenic Intergenic 1374473 NR_147146 105377180 Hs.531803 NR_147146 ENSG00000239440 LINC02008 - long intergenic non-protein coding RNA 2008 ncRNA 196.385-3 chr5 6584670 6585268 + 0.692308 NA intron (NR_024424, intron 1 of 2) intron (NR_024424, intron 1 of 2) 1693 NR_024424 255167 Hs.435515 NR_024423 ENSG00000250056 LINC01018 SRHC long intergenic non-protein coding RNA 1018 ncRNA 185.231-2 chr11 82469675 82470178 + 0.692308 NA Intergenic L1MA7|LINE|L1 -66013 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA 201.231-6 chrX 70576550 70577022 + 0.692308 NA intron (NM_001003811, intron 26 of 30) intron (NM_001003811, intron 26 of 30) -120792 NR_109801 100873930 Hs.571699 NR_046586 ENSG00000231651 DLG3-AS1 - DLG3 antisense RNA 1 ncRNA 225.539-2 chr3 89230078 89230510 + 0.692308 NA intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 122673 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 240.846 chr9 77430114 77430729 + 0.692308 NA intron (NM_004297, intron 4 of 6) intron (NM_004297, intron 4 of 6) -17228 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA 221.538 chr3 83976094 83976554 + 0.692308 NA Intergenic Intergenic 893251 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 197-3 chr5 76451345 76451692 + 0.692308 NA intron (NM_006633, intron 1 of 35) intron (NM_006633, intron 1 of 35) 48233 NM_006633 10788 Hs.291030 NM_006633 ENSG00000145703 IQGAP2 - IQ motif containing GTPase activating protein 2 protein-coding 155.615-5 chr2 209627728 209627972 + 0.692308 NA intron (NM_001039538, intron 4 of 14) intron (NM_001039538, intron 4 of 14) 48171 NM_031845 4133 Hs.368281 NM_002374 ENSG00000078018 MAP2 MAP-2|MAP2A|MAP2B|MAP2C microtubule associated protein 2 protein-coding 154.461-6 chr20 56389508 56390342 + 0.692308 NA intron (NM_001323304, intron 1 of 9) L2a|LINE|L2 2290 NM_198435 6790 Hs.250822 NM_003600 ENSG00000087586 AURKA AIK|ARK1|AURA|BTAK|PPP1R47|STK15|STK6|STK7 aurora kinase A protein-coding 185 chr15 68372868 68373200 + 0.692308 NA intron (NM_001004439, intron 2 of 29) intron (NM_001004439, intron 2 of 29) 59129 NM_001004439 22801 Hs.436416 NM_012211 ENSG00000137809 ITGA11 HsT18964 integrin subunit alpha 11 protein-coding 185.923-3 chr14_GL000225v1_random 86462 86973 + 0.692308 NA NA BSR/Beta|Satellite|Satellite NA NA 172.154-5 chr22 44887035 44887524 + 0.692308 NA intron (NR_134535, intron 9 of 11) intron (NR_134535, intron 9 of 11) 116340 NR_147506 101927551 Hs.683911 NR_147506 ENSG00000230922 LOC101927551 - uncharacterized LOC101927551 ncRNA 170.846-6 chr5 40947420 40947790 + 0.692308 NA exon (NM_000587, exon 8 of 18) exon (NM_000587, exon 8 of 18) 38108 NM_000587 730 Hs.78065 NM_000587 ENSG00000112936 C7 - complement C7 protein-coding 154.923-9 chr4 29897458 29897875 + 0.692308 NA Intergenic Intergenic 683374 NR_146996 105374561 Hs.582013 NR_146996 ENSG00000248338 LINC02472 - long intergenic non-protein coding RNA 2472 ncRNA 180.231-6 chr6 47627234 47627582 + 0.692308 NA TTS (NM_012120) TTS (NM_012120) -29064 NM_153839 222611 Hs.724860 NM_153839 ENSG00000164393 ADGRF2 GPR111|PGR20|hGPCR35 adhesion G protein-coupled receptor F2 protein-coding 161.769-6 chr5 34836860 34837178 + 0.692308 NA Intergenic Intergenic -2145 NM_144725 153657 Hs.435742 NM_144725 ENSG00000205838 TTC23L MC25-1 tetratricopeptide repeat domain 23 like protein-coding 215.615-4 chr14 75789612 75790145 + 0.692308 NA intron (NM_015072, intron 26 of 31) L1ME3F|LINE|L1 128632 NM_015072 23093 Hs.709609 NM_015072 ENSG00000119685 TTLL5 CORD19|KIAA0998|STAMP tubulin tyrosine ligase like 5 protein-coding 167.077 chr1 188371007 188371606 + 0.692308 NA Intergenic Intergenic 927678 NR_132374 106144535 Hs.568709 NR_132374 LINC01037 - long intergenic non-protein coding RNA 1037 ncRNA 170.462 chr1 39388399 39388774 + 0.692308 NA exon (NM_012090, exon 52 of 93) exon (NM_012090, exon 52 of 93) -20487 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding 153-10 chrX 97714171 97714480 + 0.692308 NA Intergenic MER5A|DNA|hAT-Charlie -149790 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA 183.692-4 chr3 88055094 88055528 + 0.692308 NA 3' UTR (NM_003663, exon 3 of 3) 3' UTR (NM_003663, exon 3 of 3) 3685 NM_003663 8545 Hs.444818 NM_003663 ENSG00000163320 CGGBP1 CGGBP|p20-CGGBP CGG triplet repeat binding protein 1 protein-coding 170.231-3 chr11 10039774 10040187 + 0.692308 NA intron (NM_030962, intron 3 of 39) L1MC4|LINE|L1 200838 NR_120539 101928008 Hs.585524 NR_120539 ENSG00000255476 LOC101928008 - uncharacterized LOC101928008 ncRNA 218.539 chr6 95926057 95926431 + 0.692308 NA Intergenic Intergenic -89730 NM_006581 10690 Hs.49117 NM_006581 ENSG00000172461 FUT9 Fuc-TIX fucosyltransferase 9 protein-coding 166.539-2 chr21 16399725 16400145 + 0.692308 NA intron (NR_136543, intron 3 of 4) intron (NR_136543, intron 3 of 4) -19268 NR_136545 388815 Hs.473394 NR_027790 MIR99AHG C21orf34|C21orf35|LINC00478|MONC mir-99a-let-7c cluster host gene ncRNA 155.538-9 chr20 21490560 21490857 + 0.692308 NA Intergenic MLT1A1|LTR|ERVL-MaLR 23356 NM_002509 4821 Hs.516922 NM_002509 ENSG00000125820 NKX2-2 NKX2.2|NKX2B NK2 homeobox 2 protein-coding 168.231-3 chr6 147846655 147846974 + 0.692308 NA Intergenic AluSz|SINE|Alu 338124 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 174.615-10 chr8 14372792 14373143 + 0.692308 NA intron (NM_001322881, intron 2 of 6) L2a|LINE|L2 480543 NR_029875 494332 NR_029875 ENSG00000199127 MIR383 MIRN383|hsa-mir-383|mir-383 microRNA 383 ncRNA 215.615-2 chr13 79984482 79984899 + 0.692308 NA Intergenic L1MC1|LINE|L1 -26387 NR_104138 101515984 Hs.569290 NR_104138 LINC01080 TCONS_00021856 long intergenic non-protein coding RNA 1080 ncRNA 166.692-3 chr8 82618853 82619246 + 0.692308 NA Intergenic Intergenic -293055 NR_134295 101927141 Hs.128557 NR_134295 ENSG00000254394 LOC101927141 - uncharacterized LOC101927141 ncRNA 176.923 chr1 170648213 170648533 + 0.692308 NA Intergenic Intergenic -15758 NM_022716 5396 Hs.283416 NM_006902 ENSG00000116132 PRRX1 AGOTC|PHOX1|PMX1|PRX-1|PRX1 paired related homeobox 1 protein-coding 189.692 chr1 39400103 39400599 + 0.692308 NA intron (NM_012090, intron 52 of 92) MIRb|SINE|MIR -8722 NM_015038 643314 Hs.658760 NM_015038 ENSG00000127603 KIAA0754 - KIAA0754 protein-coding 267.308 chr8 79716506 79717104 + 0.692308 NA Intergenic Charlie2b|DNA|hAT-Charlie 49670 NM_001282851 23462 Hs.234434 NM_012258 ENSG00000164683 HEY1 BHLHb31|CHF2|HERP2|HESR1|HRT-1|NERP2|OAF1|hHRT1 hes related family bHLH transcription factor with YRPW motif 1 protein-coding 167.077-12 chr8 67100228 67100586 + 0.692308 NA intron (NM_001364870, intron 6 of 27) intron (NM_001364870, intron 6 of 27) 16559 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding 182.077-2 chr14 61902203 61902541 + 0.692308 NA intron (NM_001367661, intron 2 of 8) L2c|LINE|L2 -25323 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 157.846-12 chr4 75794677 75794956 + 0.692308 NA intron (NM_003715, intron 13 of 23) intron (NM_003715, intron 13 of 23) 70294 NM_003715 8615 Hs.744877 NM_003715 ENSG00000138768 USO1 P115|TAP|VDP USO1 vesicle transport factor protein-coding 290.538 chr12 13681214 13682287 + 0.692308 NA intron (NM_000834, intron 3 of 12) L1MA9|LINE|L1 298606 NM_000834 2904 Hs.504844 NM_000834 ENSG00000273079 GRIN2B EIEE27|GluN2B|MRD6|NMDAR2B|NR2B|NR3|hNR3 glutamate ionotropic receptor NMDA type subunit 2B protein-coding 184-2 chr3 144532420 144532729 + 0.692308 NA Intergenic Intergenic 559493 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding 192.615-5 chr5 128512737 128513107 + 0.692308 NA intron (NM_001999, intron 5 of 64) MIRb|SINE|MIR 25323 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding 161.923-2 chr2 43440708 43441101 + 0.692308 NA intron (NM_001083953, intron 26 of 37) L4_A_Mam|LINE|RTE-X 155070 NM_001083953 63892 Hs.369592 NM_022065 ENSG00000115970 THADA ARMC13|GITA THADA armadillo repeat containing protein-coding 179.769-2 chr11 30903573 30903937 + 0.692308 NA intron (NM_001367979, intron 31 of 38) intron (NM_001367979, intron 31 of 38) 88931 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 155.615-2 chr10 52616202 52616696 + 0.692308 NA intron (NR_155748, intron 1 of 2) MLT1D|LTR|ERVL-MaLR 138955 NR_155748 105378305 Hs.257871 NR_155748 LOC105378305 - uncharacterized LOC105378305 ncRNA 153-8 chr6 8105699 8106097 + 0.692308 NA Intergenic UCON71|Unknown|Unknown -3303 NR_037618 100526837 Hs.719272 NR_037618 EEF1E1-BLOC1S5 EEF1E1-MUTED EEF1E1-BLOC1S5 readthrough (NMD candidate) ncRNA 162.231 chr12 33571589 33572057 + 0.692308 NA Intergenic (TA)n|Simple_repeat|Simple_repeat -132004 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding 232.077 chr4 33964966 33965474 + 0.692308 NA intron (NR_125902, intron 3 of 4) Zaphod|DNA|hAT-Tip100 74673 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 232.154 chr11 106150273 106150681 + 0.692308 NA Intergenic MIRc|SINE|MIR -18361 NR_135099 105369473 Hs.524010 NR_135099 ENSG00000254580 LINC02719 - long intergenic non-protein coding RNA 2719 ncRNA 168.846 chr18 7060848 7061395 + 0.692308 NA intron (NM_005559, intron 3 of 62) AluJb|SINE|Alu 56676 NM_005559 284217 Hs.270364 NM_005559 ENSG00000101680 LAMA1 LAMA|PTBHS|S-LAM-alpha laminin subunit alpha 1 protein-coding 188.615 chr14 53416702 53417079 + 0.692308 NA Intergenic L1MC4|LINE|L1 263536 NR_110062 101927620 NR_110062 ENSG00000258731 LOC101927620 - uncharacterized LOC101927620 ncRNA 226.077 chr17 15243335 15243968 + 0.692308 NA intron (NR_104018, intron 1 of 2) intron (NR_104018, intron 1 of 2) 8045 NR_039884 100616125 NR_039884 ENSG00000265110 MIR4731 - microRNA 4731 ncRNA 170.769-8 chr16 65827212 65827614 + 0.692308 NA Intergenic Intergenic -251113 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA 216.308-3 chr7 77841342 77841929 + 0.692308 NA intron (NM_001366085, intron 2 of 10) intron (NM_001366085, intron 2 of 10) 1505 NM_001127359 57157 Hs.203965 NM_020432 ENSG00000006576 PHTF2 - putative homeodomain transcription factor 2 protein-coding 218.769 chr5 78179330 78179682 + 0.692308 NA intron (NM_003664, intron 8 of 26) intron (NM_003664, intron 8 of 26) 115192 NM_001271769 8546 Hs.532091 NM_003664 ENSG00000132842 AP3B1 ADTB3|ADTB3A|HPS|HPS2|PE adaptor related protein complex 3 subunit beta 1 protein-coding 158.154-3 chr3 170898390 170898834 + 0.692308 NA intron (NM_020390, intron 3 of 4) THE1D|LTR|ERVL-MaLR 10025 NM_020390 56648 Hs.164144 NM_020390 ENSG00000163577 EIF5A2 EIF-5A2|eIF5AII eukaryotic translation initiation factor 5A2 protein-coding 209.615 chr2 180197059 180197434 + 0.692308 NA Intergenic Intergenic -189949 NM_020943 57703 Hs.311363 NM_020943 ENSG00000163510 CWC22 EIF4GL|NCM|fSAPb CWC22 spliceosome associated protein homolog protein-coding 164-3 chr17 72549630 72549904 + 0.692308 NA intron (NR_036488, intron 1 of 3) intron (NR_036488, intron 1 of 3) 43037 NR_152515 100499467 Hs.157726 NR_036488 ENSG00000227036 LINC00673 ERRLR01|HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1 long intergenic non-protein coding RNA 673 ncRNA 161.538-12 chr5 88149878 88150179 + 0.692308 NA Intergenic Intergenic 118817 NM_001289007 153396 Hs.379972 NM_153354 ENSG00000164180 TMEM161B FLB3342|PRO1313 transmembrane protein 161B protein-coding 158.154-5 chrX 58176588 58177057 + 0.692308 NA Intergenic ALR/Alpha|Satellite|centr -266189 NM_007156 7789 Hs.550094 NM_007156 ENSG00000198205 ZXDA ZNF896 zinc finger X-linked duplicated A protein-coding 172.462-4 chr4 10221094 10221456 + 0.692308 NA Intergenic Intergenic -104476 NM_005112 9948 Hs.128548 NM_005112 ENSG00000071127 WDR1 AIP1|HEL-S-52|NORI-1 WD repeat domain 1 protein-coding 151.846-12 chr7 32030696 32031261 + 0.692308 NA intron (NM_001322059, intron 3 of 17) LTR37A|LTR|ERV1 39429 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 151.538-5 chr3 118090634 118091018 + 0.692308 NA Intergenic L1MD2|LINE|L1 -399901 NR_146652 105374057 Hs.518179 NR_146652 ENSG00000241213 LINC02024 - long intergenic non-protein coding RNA 2024 ncRNA 156.692 chr1 35609915 35610247 + 0.692308 NA intron (NM_002794, intron 3 of 5) intron (NM_002794, intron 3 of 5) 21456 NM_001199780 5690 Hs.471441 NM_002794 ENSG00000126067 PSMB2 HC7-I proteasome subunit beta 2 protein-coding 235.846 chr7 65927401 65927970 + 0.692308 NA intron (NM_001284342, intron 1 of 1) LTR71B|LTR|ERV1 54528 NM_001293105 2990 Hs.255230 NM_000181 ENSG00000169919 GUSB BG|MPS7 glucuronidase beta protein-coding 194.077 chr11 62162655 62163050 + 0.692308 NA Intergenic L1PA7|LINE|L1 -27364 NM_006552 10648 Hs.202686 NM_006552 ENSG00000168515 SCGB1D1 LIPA|LPHA|LPNA secretoglobin family 1D member 1 protein-coding 161.461-3 chr4 40500668 40501022 + 0.692308 NA intron (NM_001098634, intron 2 of 6) intron (NM_001098634, intron 2 of 6) 1274 NR_039966 100616274 NR_039966 ENSG00000263642 MIR4802 - microRNA 4802 ncRNA 159.077-8 chr5 177143927 177144178 + 0.692308 NA intron (NM_172349, intron 3 of 23) AluSx|SINE|Alu 9823 NM_001365684 64324 Hs.106861 NM_022455 ENSG00000165671 NSD1 ARA267|KMT3B|SOTOS|SOTOS1|STO nuclear receptor binding SET domain protein 1 protein-coding 155.769-9 chr21 45774035 45774603 + 0.692308 NA intron (NM_001348243, intron 3 of 15) AluSc5|SINE|Alu 26305 NM_001348243 54039 Hs.474049 NM_020528 ENSG00000183570 PCBP3 ALPHA-CP3|PCBP3-OT1|PCBP3OT poly(rC) binding protein 3 protein-coding 207.462 chr2 27514299 27514651 + 0.692308 NA intron (NM_001486, intron 16 of 18) L1MC4|LINE|L1 17636 NM_001486 2646 Hs.89771 NM_001486 ENSG00000084734 GCKR FGQTL5|GKRP glucokinase regulator protein-coding 179.615-2 chr2 229136617 229137007 + 0.692308 NA intron (NM_001330157, intron 1 of 1) intron (NM_001330157, intron 1 of 1) 95280 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 159.308-4 chr3 50428865 50429100 + 0.692308 NA intron (NM_001291101, intron 3 of 37) AluSz6|SINE|Alu 63619 NR_111913 11068 Hs.149443 NM_007022 ENSG00000114395 CYB561D2 101F6|TSP10|XXcos-LUCA11.4 cytochrome b561 family member D2 protein-coding 168.154-3 chr5 41227827 41228346 + 0.692308 NA intron (NM_001115131, intron 1 of 17) L1MA8|LINE|L1 -14554 NM_000065 729 Hs.481992 NM_000065 ENSG00000039537 C6 - complement C6 protein-coding 165.385-11 chr3 78510218 78510695 + 0.692308 NA Intergenic MLT1A0|LTR|ERVL-MaLR -461493 NR_146636 105377172 NR_146636 LINC02077 - long intergenic non-protein coding RNA 2077 ncRNA 159.231-12 chr8 116988946 116989213 + 0.692308 NA intron (NM_001172811, intron 2 of 9) intron (NM_001172811, intron 2 of 9) 38104 NM_001172813 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 198.615 chr18 68312271 68312861 + 0.692308 NA Intergenic LTR16|LTR|ERVL 402542 NM_001350515 54495 Hs.440534 NM_019022 ENSG00000166479 TMX3 PDIA13|TXNDC10 thioredoxin related transmembrane protein 3 protein-coding 197.846-3 chr2 35775470 35775913 + 0.692308 NA Intergenic Intergenic 304286 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 157.385-3 chr14 50104551 50104912 + 0.692308 NA intron (NR_131171, intron 1 of 8) intron (NR_131171, intron 1 of 8) 312 NR_131171 196913 Hs.406934 NM_001014830 LINC01599 C14orf183 long intergenic non-protein coding RNA 1599 ncRNA 154.692-3 chr2 213857117 213857538 + 0.692308 NA intron (NR_047660, intron 9 of 14) Tigger1|DNA|TcMar-Tigger 99260 NR_039640 100616375 NR_039640 ENSG00000265734 MIR4438 - microRNA 4438 ncRNA 234.077-3 chr8 126953844 126954418 + 0.692308 NA Intergenic Intergenic -59023 NR_045262 100750225 Hs.571530 NR_045262 ENSG00000253438 PCAT1 PCA1|PCAT-1 prostate cancer associated transcript 1 ncRNA 185-4 chr6 147652125 147652717 + 0.692308 NA Intergenic Intergenic 143731 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 157.154-7 chr4 129170131 129170462 + 0.692308 NA Intergenic Intergenic 74144 NM_001099783 132321 Hs.567679 NM_173487 ENSG00000151470 C4orf33 - chromosome 4 open reading frame 33 protein-coding 152.077-14 chr8 121886889 121887221 + 0.692308 NA Intergenic L1PA16|LINE|L1 -245615 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 155.539-5 chr4 160689760 160690091 + 0.692308 NA Intergenic L1PA15|LINE|L1 -912141 NR_146278 109729132 NR_146278 ENSG00000250488 LINC02233 - long intergenic non-protein coding RNA 2233 ncRNA 156-3 chr10 54781539 54781896 + 0.692308 NA intron (NM_001354404, intron 4 of 34) intron (NM_001354404, intron 4 of 34) 19514 NM_001354430 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 195.692-5 chr5 116247297 116247798 + 0.692308 NA intron (NM_001308080, intron 5 of 6) L1PA13|LINE|L1 -8196 NR_162144 113219464 NR_162144 MIR12130 - microRNA 12130 ncRNA 209.308 chr2 134920108 134920720 + 0.692308 NA intron (NR_135468, intron 2 of 9) intron (NR_135468, intron 2 of 9) 1592 NR_037649 905 Hs.744115 NM_001241 ENSG00000082258 CCNT2 CYCT2 cyclin T2 protein-coding 154.154-15 chr4 166369554 166369967 + 0.692308 NA Intergenic L1M1|LINE|L1 496523 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding 153.539-4 chr9 71112294 71112627 + 0.692308 NA intron (NM_001366143, intron 1 of 25) intron (NM_001366143, intron 1 of 25) 9161 NM_001007471 80036 Hs.47288 NM_020952 ENSG00000083067 TRPM3 GON-2|LTRPC3|MLSN2 transient receptor potential cation channel subfamily M member 3 protein-coding 155.539-3 chr20 57575212 57575491 + 0.692308 NA Intergenic (CATC)n|Simple_repeat|Simple_repeat 14241 NM_002591 5105 Hs.1872 NM_002591 ENSG00000124253 PCK1 PCKDC|PEPCK-C|PEPCK1|PEPCKC phosphoenolpyruvate carboxykinase 1 protein-coding 155.846-12 chr8 122806787 122807163 + 0.692308 NA intron (NM_001362797, intron 1 of 4) LTR33|LTR|ERVL 25320 NM_001362797 22882 Hs.377090 NM_014943 ENSG00000178764 ZHX2 AFR1|RAF zinc fingers and homeoboxes 2 protein-coding 197.308-2 chr10 91492831 91493270 + 0.692308 NA intron (NM_182765, intron 13 of 20) intron (NM_182765, intron 13 of 20) 82765 NM_182765 143279 Hs.596096 NM_173497 ENSG00000165338 HECTD2 - HECT domain E3 ubiquitin protein ligase 2 protein-coding 179.461 chr22 49985717 49986230 + 0.692308 NA Intergenic L1M4|LINE|L1 23107 NR_106879 102465493 NR_106879 ENSG00000276753 MIR6821 hsa-mir-6821 microRNA 6821 ncRNA 200.077 chr1 81124306 81124752 + 0.692308 NA Intergenic Intergenic -181663 NM_001366003 23266 Hs.24212 NM_012302 ENSG00000117114 ADGRL2 CIRL2|CL2|LEC1|LPHH1|LPHN2 adhesion G protein-coupled receptor L2 protein-coding 152 chr1 80019346 80019788 + 0.692308 NA Intergenic Intergenic -516188 NR_125940 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 156.923-9 chr2 74967358 74967669 + 0.692308 NA intron (NM_019896, intron 3 of 3) L1ME3B|LINE|L1 8870 NM_019896 56655 Hs.469060 NM_019896 ENSG00000115350 POLE4 YHHQ1|p12 DNA polymerase epsilon 4, accessory subunit protein-coding 154-8 chr7 84680729 84681261 + 0.692308 NA Intergenic (TATA)n|Simple_repeat|Simple_repeat 148519 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA 173.538-11 chr9 81083835 81084241 + 0.692308 NA Intergenic Intergenic 605497 NM_001303103 7088 Hs.197320 NM_005077 ENSG00000196781 TLE1 ESG|ESG1|GRG1 TLE family member 1, transcriptional corepressor protein-coding 184.154-6 chr4 65935559 65936041 + 0.692308 NA Intergenic Intergenic -265305 NM_001281765 2044 Hs.654492 NM_004439 ENSG00000145242 EPHA5 CEK7|EHK-1|EHK1|EK7|HEK7|TYRO4 EPH receptor A5 protein-coding 210.462 chr1 34034388 34035015 + 0.692308 NA intron (NM_052896, intron 2 of 69) MLT1K|LTR|ERVL-MaLR 130573 NM_001281956 114784 Hs.656915 NM_052896 ENSG00000121904 CSMD2 dJ1007G16.1|dJ1007G16.2|dJ947L8.1 CUB and Sushi multiple domains 2 protein-coding 159.231-13 chr8 117742793 117743211 + 0.692308 NA Intergenic AluSx1|SINE|Alu 177911 NR_145799 109623457 NR_145799 SNORD168 - small nucleolar RNA, C/D box 168 snoRNA 178.385-5 chr15 70570567 70570848 + 0.692308 NA TTS (NR_135691) TTS (NR_135691) 15899 NR_135691 101929151 Hs.434703 NR_135691 ENSG00000280639 LINC02204 - long intergenic non-protein coding RNA 2204 ncRNA 169.385-7 chr8 112676145 112676593 + 0.692308 NA intron (NM_001363185, intron 14 of 66) L2|LINE|L2 32876 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 178.846-5 chr4 11664935 11665294 + 0.692308 NA Intergenic Intergenic 104354 NR_146995 105374484 Hs.581972 NR_146995 ENSG00000248300 LINC02360 - long intergenic non-protein coding RNA 2360 ncRNA 211 chr2 231344107 231344556 + 0.692308 NA intron (NM_001352757, intron 19 of 19) L1ME4c|LINE|L1 -18377 NR_039937 100616317 NR_039937 ENSG00000263641 MIR4777 - microRNA 4777 ncRNA 194.539 chr17 43460657 43461074 + 0.692308 NA Intergenic AluJb|SINE|Alu 16059 NR_031751 100313779 NR_031751 ENSG00000284344 MIR2117 - microRNA 2117 ncRNA 155.846-6 chr3 48770516 48771324 + 0.692308 NA intron (NM_001321982, intron 6 of 11) intron (NM_001321982, intron 6 of 11) -53642 NM_001005909 51447 Hs.595983 NM_016291 ENSG00000068745 IP6K2 IHPK2|InsP6K2|PIUS inositol hexakisphosphate kinase 2 protein-coding 195.308 chr4 121813733 121814488 + 0.692308 NA intron (NM_005033, intron 10 of 11) (TA)n|Simple_repeat|Simple_repeat 9773 NM_001237 890 Hs.58974 NM_001237 ENSG00000145386 CCNA2 CCN1|CCNA cyclin A2 protein-coding 183.231-8 chr4 95999265 95999668 + 0.692308 NA Intergenic Intergenic 159373 NM_005390 5161 Hs.131361 NM_005390 ENSG00000163114 PDHA2 PDHAL pyruvate dehydrogenase E1 alpha 2 subunit protein-coding 181.154-4 chr2 44731786 44732241 + 0.692308 NA intron (NM_024766, intron 7 of 10) AluJr4|SINE|Alu 206875 NR_147194 107985879 Hs.436392 NR_147194 ENSG00000259439 LINC01833 K21.1|RP11-89 long intergenic non-protein coding RNA 1833 ncRNA 188.462-4 chr6 44378787 44379468 + 0.692308 NA Intergenic Intergenic -8579 NM_001253 988 Hs.485471 NM_001253 ENSG00000096401 CDC5L CDC5|CDC5-LIKE|CEF1|PCDC5RP|dJ319D22.1 cell division cycle 5 like protein-coding 169.846-10 chr9 109133148 109133593 + 0.692308 NA 3' UTR (NM_014334, exon 5 of 5) 3' UTR (NM_014334, exon 5 of 5) -13423 NM_032012 23731 Hs.308074 NM_032012 ENSG00000106771 TMEM245 C9orf5|CG-2|CG2 transmembrane protein 245 protein-coding 155.538-11 chr3 64618586 64618947 + 0.692308 NA intron (NM_001318781, intron 18 of 38) intron (NM_001318781, intron 18 of 38) 57420 NR_110151 101929335 Hs.476604 NR_110150 ENSG00000241158 ADAMTS9-AS1 - ADAMTS9 antisense RNA 1 ncRNA 227.923-2 chr10 51516620 51517336 + 0.692308 NA intron (NM_001098512, intron 3 of 17) intron (NM_001098512, intron 3 of 17) 182617 NM_015235 23283 Hs.591358 NM_015235 ENSG00000177613 CSTF2T CstF-64T cleavage stimulation factor subunit 2 tau variant protein-coding 164-8 chr3 189839060 189839462 + 0.692308 NA intron (NM_003722, intron 4 of 13) intron (NM_003722, intron 4 of 13) 9339 NR_030642 100126340 NR_030642 ENSG00000216058 MIR944 MIRN944|hsa-mir-944|mir-944 microRNA 944 ncRNA 171.462 chr13 38628470 38628916 + 0.692308 NA intron (NR_126377, intron 2 of 2) intron (NR_126377, intron 2 of 2) 57982 NR_126377 101929121 Hs.618449 NR_126377 LINC00437 TCONS_00021639 long intergenic non-protein coding RNA 437 ncRNA 210.308-6 chr4 66949719 66950252 + 0.692308 NA Intergenic Intergenic 472015 NR_110747 101927237 Hs.435644 NR_110747 ENSG00000250075 LOC101927237 - uncharacterized LOC101927237 ncRNA 174.538-2 chr2 58300950 58301275 + 0.692308 NA Intergenic L1MB7|LINE|L1 25235 NR_147010 105374744 Hs.447687 NR_147010 ENSG00000225226 LINC01795 - long intergenic non-protein coding RNA 1795 ncRNA 197.692-2 chr18 67653093 67653458 + 0.692308 NA intron (NR_033921, intron 1 of 4) intron (NR_033921, intron 1 of 4) -136555 NM_032160 92126 Hs.124673 NM_032160 ENSG00000171451 DSEL C18orf4|DE-epi2 dermatan sulfate epimerase like protein-coding 193.154-2 chr5 129562174 129562536 + 0.692308 NA intron (NM_133638, intron 7 of 22) Charlie1a|DNA|hAT-Charlie -101666 NR_125748 103689846 Hs.628635 NR_125748 ENSG00000249421 ADAMTS19-AS1 - ADAMTS19 antisense RNA 1 ncRNA 251.923 chr2 147375077 147375617 + 0.692308 NA Intergenic Intergenic -469170 NM_001278579 92 Hs.470174 NM_001616 ENSG00000121989 ACVR2A ACTRII|ACVR2 activin A receptor type 2A protein-coding 202 chr16 9895246 9895594 + 0.692308 NA intron (NM_001134408, intron 3 of 13) intron (NM_001134408, intron 3 of 13) 286647 NM_001134408 2903 Hs.411472 NM_000833 ENSG00000183454 GRIN2A EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A glutamate ionotropic receptor NMDA type subunit 2A protein-coding 182.308-6 chr20 49810986 49811253 + 0.692308 NA Intergenic Intergenic -1594 NM_001260491 23315 Hs.444202 NM_015266 ENSG00000197818 SLC9A8 NHE-8|NHE8 solute carrier family 9 member A8 protein-coding 184.154-7 chr5 4790410 4790892 + 0.692308 NA Intergenic L1MC2|LINE|L1 17170 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 175.538-2 chr2 119930312 119930768 + 0.692308 NA intron (NM_002830, intron 13 of 26) intron (NM_002830, intron 13 of 26) -82537 NR_135920 57669 Hs.369232 NM_020909 ENSG00000115109 EPB41L5 BE37|YMO1|YRT erythrocyte membrane protein band 4.1 like 5 protein-coding 174.769-4 chr2 8891544 8891942 + 0.692308 NA intron (NR_135606, intron 4 of 12) intron (NR_135606, intron 4 of 12) -54130 NM_001348739 57498 Hs.9873 NM_020738 ENSG00000134313 KIDINS220 ARMS|SINO kinase D interacting substrate 220 protein-coding 177.923-5 chr8 54559815 54560269 + 0.692308 NA Intergenic Intergenic -56054 NM_006269 6101 Hs.732820 NM_006269 ENSG00000104237 RP1 DCDC4A|ORP1 RP1 axonemal microtubule associated protein-coding 165.923-5 chr4 55171246 55171769 + 0.692308 NA Intergenic AluJb|SINE|Alu -45912 NM_002253 3791 Hs.479756 NM_002253 ENSG00000128052 KDR CD309|FLK1|VEGFR|VEGFR2 kinase insert domain receptor protein-coding 156.462-4 chr2 156271144 156271652 + 0.692308 NA Intergenic Intergenic -16467 NR_110250 101929378 Hs.171192 NR_110249 ENSG00000226383 LINC01876 - long intergenic non-protein coding RNA 1876 ncRNA 168.231 chr3 62989177 62989663 + 0.692308 NA Intergenic LTR33|LTR|ERVL -113268 NR_027104 285401 Hs.211125 NR_027104 ENSG00000244342 LINC00698 - long intergenic non-protein coding RNA 698 ncRNA 157.231-7 chr3 171797459 171797932 + 0.692308 NA intron (NM_002662, intron 1 of 26) intron (NM_002662, intron 1 of 26) 12788 NM_001130081 5337 Hs.382865 NM_002662 ENSG00000075651 PLD1 CVDD phospholipase D1 protein-coding 215.538 chr4 88696139 88696637 + 0.692308 NA 3' UTR (NM_153757, exon 1 of 1) 3' UTR (NM_153757, exon 1 of 1) 1441 NM_153757 266812 Hs.12554 NM_153757 ENSG00000177432 NAP1L5 DRLM nucleosome assembly protein 1 like 5 protein-coding 241.615 chr7 3272852 3273461 + 0.692308 NA Intergenic CR1_Mam|LINE|CR1 -28096 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 181.384 chr18 60657742 60658263 + 0.692308 NA Intergenic Intergenic -285227 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding 238.615-2 chr4 36088239 36088824 + 0.692308 NA intron (NR_146894, intron 28 of 32) intron (NR_146894, intron 28 of 32) 155408 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 157.769-4 chr9 124688998 124689225 + 0.692308 NA intron (NR_038975, intron 1 of 1) intron (NR_038975, intron 1 of 1) -3331 NR_029611 406954 NR_029611 ENSG00000207595 MIR181A2 MIRN181A|MIRN181A2|hsa-mir-181a-2|mir-181a-2 microRNA 181a-2 ncRNA 315.461 chr11 46788536 46789462 + 0.692308 NA intron (NM_001008938, intron 15 of 43) intron (NM_001008938, intron 15 of 43) -26500 NR_003056 692108 Hs.693252 NR_003056 ENSG00000212135 SNORD67 HBII-166 small nucleolar RNA, C/D box 67 snoRNA 222.461 chr10 110126374 110126940 + 0.692308 NA intron (NM_001320591, intron 13 of 15) intron (NM_001320591, intron 13 of 15) -80948 NM_130439 4601 Hs.602078 NM_005962 ENSG00000119950 MXI1 MAD2|MXD2|MXI|bHLHc11 MAX interactor 1, dimerization protein protein-coding 164.462-2 chr8 21938522 21938928 + 0.692308 NA intron (NM_015024, intron 1 of 27) Charlie29a|DNA|hAT-Charlie 19063 NM_015024 23039 Hs.172685 NM_015024 ENSG00000130227 XPO7 EXP7|RANBP16 exportin 7 protein-coding 166.539-3 chr3 80436223 80436749 + 0.692308 NA Intergenic Intergenic -328411 NR_147143 105377175 Hs.180696 NR_147143 ENSG00000242781 LINC02050 - long intergenic non-protein coding RNA 2050 ncRNA 193.846-4 chr4 71271422 71271898 + 0.692308 NA intron (NM_001098484, intron 3 of 25) L4_B_Mam|LINE|RTE-X -67393 NM_003759 8671 Hs.5462 NM_003759 ENSG00000080493 SLC4A4 HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC solute carrier family 4 member 4 protein-coding 178.385 chr1 22214021 22214441 + 0.692308 NA Intergenic L1M4|LINE|L1 -52008 NR_039613 100616433 NR_039613 ENSG00000266564 MIR4418 - microRNA 4418 ncRNA 182-6 chr8 134177313 134177914 + 0.692308 NA Intergenic LTR16B1|LTR|ERVL 291117 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 162.923-5 chr4 86070243 86070514 + 0.692308 NA intron (NM_001318069, intron 9 of 13) intron (NM_001318069, intron 9 of 13) -49428 NR_110879 101929064 Hs.662221 NR_110879 ENSG00000250062 LOC101929064 - uncharacterized LOC101929064 ncRNA 152.231-3 chr20 60058310 60058576 + 0.692308 NA TTS (NR_126504) TTS (NR_126504) 2518 NR_126504 284756 Hs.335319 NR_126504 ENSG00000176659 C20orf197 - chromosome 20 open reading frame 197 ncRNA 159.692-6 chr2 145706398 145706662 + 0.692308 NA Intergenic L1MA9|LINE|L1 -880527 NR_026904 728773 Hs.334462 NR_026904 PABPC1P2 PABP2|PABP4|PABPCP2|PABPCP4 poly(A) binding protein cytoplasmic 1 pseudogene 2 pseudo 191.308-5 chr20 50598101 50598519 + 0.692308 NA intron (NM_001290268, intron 13 of 21) intron (NM_001290268, intron 13 of 21) 12524 NR_030375 693230 NR_030375 ENSG00000208018 MIR645 MIRN645|hsa-mir-645 microRNA 645 ncRNA 181.308-5 chr3 97192814 97193341 + 0.692308 NA intron (NM_001080448, intron 3 of 17) L1MA3|LINE|L1 -246530 NM_001278300 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 157.692-8 chr20 31068662 31069001 + 0.692308 NA Intergenic (GGAAT)n|Simple_repeat|Simple_repeat -188833 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 162.846 chr11 56995337 56995777 + 0.692308 NA Intergenic LTR1B|LTR|ERV1 6643 NM_001005323 390181 Hs.554520 NM_001005323 ENSG00000181273 OR5AK2 - olfactory receptor family 5 subfamily AK member 2 protein-coding 179.615 chr14 54657504 54658019 + 0.692308 NA intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) 90149 NM_001161576 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding 165.692-4 chr13 31380325 31380701 + 0.692308 NA Intergenic Intergenic 180538 NM_194318 145173 Hs.13205 NM_194318 ENSG00000187676 B3GLCT B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T beta 3-glucosyltransferase protein-coding 207.692-8 chr8 24402884 24403346 + 0.692308 NA intron (NM_014479, intron 12 of 13) intron (NM_014479, intron 12 of 13) 18830 NM_001145272 27299 Hs.521459 NM_014479 ENSG00000134028 ADAMDEC1 M12.219 ADAM like decysin 1 protein-coding 217.077-2 chr16 81863189 81863555 + 0.692308 NA intron (NM_002661, intron 5 of 32) L1MB3|LINE|L1 84081 NM_002661 5336 Hs.372303 NM_002661 ENSG00000197943 PLCG2 APLAID|FCAS3|PLC-IV|PLC-gamma-2 phospholipase C gamma 2 protein-coding 199.308 chr22 26206875 26207278 + 0.692308 NA intron (NM_001184776, intron 1 of 14) intron (NM_001184776, intron 1 of 14) 37602 NM_001184775 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding 159.923-2 chr1 197530326 197530749 + 0.692308 NA intron (NR_125340, intron 17 of 19) intron (NR_125340, intron 17 of 19) 244943 NM_001195216 163486 Hs.125056 NM_019049 ENSG00000213047 DENND1B C1ORF18|C1orf218|FAM31B DENN domain containing 1B protein-coding 201.923-3 chr16 35123101 35123495 + 0.692308 NA Intergenic Intergenic 47093 NR_002837 606551 Hs.646441 NR_002837 UBE2MP1 - ubiquitin conjugating enzyme E2 M pseudogene 1 pseudo 151.615-9 chr3 96269296 96269581 + 0.692308 NA Intergenic MLT1C|LTR|ERVL-MaLR -90526 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA 157.462-4 chr3 38916904 38917347 + 0.692308 NA intron (NM_014139, intron 7 of 25) L1PA13|LINE|L1 33436 NM_014139 11280 Hs.591657 NM_014139 ENSG00000168356 SCN11A FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2 sodium voltage-gated channel alpha subunit 11 protein-coding 157.538-4 chr16 52212661 52212952 + 0.692308 NA Intergenic L1MC4a|LINE|L1 -45758 NR_135281 283854 Hs.266768 NR_135281 ENSG00000260887 CASC22 LINC01373|LincRNA-ENST00000515084|TCONS_00024290 cancer susceptibility 22 ncRNA 176.308-2 chr15 58354147 58354644 + 0.692308 NA Intergenic AluSx3|SINE|Alu -77596 NM_000236 3990 Hs.654472 NM_000236 ENSG00000166035 LIPC HDLCQ12|HL|HTGL|LIPH lipase C, hepatic type protein-coding 200.769-2 chr2 211908002 211908358 + 0.692308 NA intron (NM_001042599, intron 3 of 26) intron (NM_001042599, intron 3 of 26) 518180 NR_031643 100313771 NR_031643 ENSG00000221782 MIR548F2 MIR548F-2|MIRN548F2|hsa-mir-548f-2 microRNA 548f-2 ncRNA 237.539-2 chr3 179566475 179566837 + 0.692308 NA intron (NM_178042, intron 1 of 13) MLT1B|LTR|ERVL-MaLR 3730 NM_004301 86 Hs.435326 NM_004301 ENSG00000136518 ACTL6A ACTL6|ARPN-BETA|Arp4|BAF53A|INO80K actin like 6A protein-coding 169.077 chr1 147284402 147284851 + 0.692308 NA intron (NM_001348462, intron 16 of 22) intron (NM_001348462, intron 16 of 22) 41484 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding 206.077-2 chr12 40123080 40123790 + 0.692308 NA Intergenic Intergenic -17354 NM_052885 114134 Hs.558595 NM_052885 ENSG00000151229 SLC2A13 HMIT solute carrier family 2 member 13 protein-coding 160.846-6 chr2 238187015 238187253 + 0.692308 NA intron (NM_030768, intron 5 of 11) AluJo|SINE|Alu 16561 NM_030768 80895 Hs.92033 NM_030768 ENSG00000132323 ILKAP ILKAP2|ILKAP3|PP2C-DELTA|PPM1O ILK associated serine/threonine phosphatase protein-coding 185.538 chr11 97117183 97117662 + 0.692308 NA Intergenic L2a|LINE|L2 608997 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 160.231-2 chr5 50830776 50831243 + 0.692308 NA intron (NM_024615, intron 22 of 25) intron (NM_024615, intron 22 of 25) 139178 NR_104653 100287592 Hs.519298 NR_104653 ENSG00000251573 LINC02106 - long intergenic non-protein coding RNA 2106 ncRNA 152.308-2 chr13 22499741 22500253 + 0.692308 NA Intergenic Intergenic 289712 NR_103810 100506622 Hs.255773 NR_103810 ENSG00000276476 LINC00540 - long intergenic non-protein coding RNA 540 ncRNA 165.308-4 chr3 72255020 72255492 + 0.692308 NA Intergenic Intergenic 103999 NR_038221 201617 Hs.382623 NR_038221 ENSG00000243083 LINC00870 - long intergenic non-protein coding RNA 870 ncRNA 169-9 chr5 18343087 18343506 + 0.692308 NA Intergenic Intergenic 536022 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 157.692-11 chr8 138166173 138166581 + 0.692308 NA intron (NM_015912, intron 12 of 19) intron (NM_015912, intron 12 of 19) -82832 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 207.692-3 chr14 51340468 51340995 + 0.692308 NA intron (NR_038358, intron 1 of 4) intron (NR_038358, intron 1 of 4) 7338 NR_038358 283553 Hs.325752 NR_038358 ENSG00000258479 LINC00640 - long intergenic non-protein coding RNA 640 ncRNA 191.231-2 chr11 125428513 125428927 + 0.615385 NA intron (NM_022062, intron 10 of 12) MIRc|SINE|MIR -66494 NM_001301851 403312 Hs.450611 NM_203452 LOC403312 - putative uncharacterized protein MGC39545 protein-coding 194.308-2 chr12 46074250 46074736 + 0.615385 NA Intergenic MIRb|SINE|MIR -83919 NM_004719 9169 Hs.210367 NM_004719 ENSG00000139218 SCAF11 CASP11|SFRS2IP|SIP1|SRRP129|SRSF2IP SR-related CTD associated factor 11 protein-coding 222.154 chr8 107091185 107091706 + 0.615385 NA Intergenic Intergenic 245070 NM_001314051 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding 200.077-3 chr7 42950918 42951396 + 0.615385 NA Intergenic ERV24B_Prim-int|LTR|ERV1 18781 NR_156497 64983 Hs.50252 NM_031903 ENSG00000106591 MRPL32 HSPC283|L32mt|MRP-L32|bMRP-59b mitochondrial ribosomal protein L32 protein-coding 164.615-5 chr12 92005339 92005634 + 0.615385 NA intron (NR_132341, intron 1 of 4) intron (NR_132341, intron 1 of 4) 136227 NR_046159 256021 Hs.651357 NM_001256373 ENSG00000257242 LINC01619 C12orf79 long intergenic non-protein coding RNA 1619 ncRNA 157.538-6 chr2 142226705 142227145 + 0.615385 NA Intergenic L1M4a2|LINE|L1 -95224 NM_018557 53353 Hs.656461 NM_018557 ENSG00000168702 LRP1B LRP-1B|LRP-DIT|LRPDIT LDL receptor related protein 1B protein-coding 208.615-3 chr8 129855093 129855537 + 0.615385 NA intron (NM_001353307, intron 8 of 13) AluSx|SINE|Alu -68691 NM_031415 56169 Hs.133244 NM_031415 ENSG00000147697 GSDMC MLZE gasdermin C protein-coding 162.462-6 chr4 119228514 119229002 + 0.615385 NA intron (NM_001371399, intron 2 of 16) L1ME1|LINE|L1 16045 NM_001371397 186-3 chr2 76463976 76464530 + 0.615385 NA Intergenic Intergenic -521712 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 194.308-4 chr2 17780427 17780942 + 0.615385 NA exon (NM_001130009, exon 14 of 14) exon (NM_001130009, exon 14 of 14) 26546 NM_001130009 348654 Hs.467793 NM_182625 ENSG00000178295 GEN1 Gen GEN1 Holliday junction 5' flap endonuclease protein-coding 161.846-7 chr4 132210017 132210340 + 0.615385 NA Intergenic Intergenic -380911 NR_126401 104355285 Hs.123483 NR_126401 ENSG00000251398 LINC01256 TCONS_l2_00021715 long intergenic non-protein coding RNA 1256 ncRNA 161.231-8 chr5 33005630 33006176 + 0.615385 NA Intergenic MER4B|LTR|ERV1 58460 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 199.692-4 chr21 25624214 25625025 + 0.615385 NA Intergenic MLT1A0|LTR|ERVL-MaLR -14639 NR_072999 58494 Hs.517227 NM_021219 ENSG00000154721 JAM2 C21orf43|CD322|JAM-B|JAMB|PRO245|VE-JAM|VEJAM junctional adhesion molecule 2 protein-coding 154.769-4 chr4 13377692 13377998 + 0.615385 NA intron (NM_001017979, intron 5 of 6) L2|LINE|L2 106495 NM_001017979 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding 192.308 chr14 70859490 70859951 + 0.615385 NA Intergenic MER57A-int|LTR|ERV1 -47739 NM_014982 22990 Hs.446559 NM_014982 ENSG00000100731 PCNX1 PCNX|PCNXL1|pecanex pecanex 1 protein-coding 157.846-11 chr4 59361367 59361866 + 0.615385 NA Intergenic L1PA13|LINE|L1 348043 NR_133942 105377247 Hs.298228 NR_133941 ENSG00000251266 LINC02429 - long intergenic non-protein coding RNA 2429 ncRNA 197.923-2 chr3 182442872 182443357 + 0.615385 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger 43248 NR_040105 401103 Hs.591304 NR_040105 ENSG00000241098 LINC01994 - long intergenic non-protein coding RNA 1994 ncRNA 187.846-2 chr1 112631025 112631567 + 0.615385 NA intron (NM_006135, intron 1 of 9) intron (NM_006135, intron 1 of 9) 11464 NM_006135 829 Hs.744974 NM_006135 ENSG00000116489 CAPZA1 CAPPA1|CAPZ|CAZ1 capping actin protein of muscle Z-line subunit alpha 1 protein-coding 168.308 chr12 42301037 42301419 + 0.615385 NA Intergenic AluJr|SINE|Alu 22631 NR_107005 102467003 NR_107005 ENSG00000278520 MIR7851 hsa-mir-7851 microRNA 7851 ncRNA 155.539-4 chr3 120481658 120482073 + 0.615385 NA Intergenic Intergenic -30873 NM_007085 11167 Hs.269512 NM_007085 ENSG00000163430 FSTL1 FRP|FSL1|MIR198|OCC-1|OCC1|tsc36 follistatin like 1 protein-coding 188.615-2 chr4 142925637 142926152 + 0.615385 NA Intergenic L1MC4a|LINE|L1 -79359 NM_001101669 8821 Hs.176376 NM_003866 ENSG00000109452 INPP4B - inositol polyphosphate-4-phosphatase type II B protein-coding 183.615-6 chr2 229020071 229020581 + 0.615385 NA Intergenic Intergenic 211766 NM_001330156 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 231.769 chr18 69331606 69332064 + 0.615385 NA Intergenic L1MB7|LINE|L1 -69053 NM_152721 220164 Hs.278285 NM_152721 ENSG00000206052 DOK6 DOK5L|HsT3226 docking protein 6 protein-coding 169.692-10 chr7 133476719 133477293 + 0.615385 NA intron (NM_021807, intron 8 of 17) L1MC2|LINE|L1 186125 NR_106749 102465139 NR_106749 ENSG00000276137 MIR6133 hsa-mir-6133 microRNA 6133 ncRNA 162.769-4 chr21 26293401 26293990 + 0.615385 NA Intergenic Intergenic -99940 NR_135516 100996571 Hs.570432 NR_135515 ENSG00000197934 CYYR1-AS1 - cysteine and tyrosine rich 1 antisense RNA 1 ncRNA 165.539 chr3 35198708 35198987 + 0.615385 NA intron (NR_110817, intron 2 of 3) intron (NR_110817, intron 2 of 3) 195176 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 151.538-8 chr5 132721428 132721931 + 0.615385 NA intron (NM_007054, intron 4 of 16) intron (NM_007054, intron 4 of 16) 15867 NM_007054 11127 Hs.43670 NM_007054 ENSG00000131437 KIF3A FLA10|KLP-20 kinesin family member 3A protein-coding 156.692-9 chr7 50127808 50128245 + 0.615385 NA intron (NM_001161834, intron 2 of 8) L1MA4|LINE|L1 31940 NM_001161834 100130988 Hs.99248 NM_001161834 ENSG00000164500 SPATA48 C7orf72 spermatogenesis associated 48 protein-coding 154.154-11 chr2 240944285 240944682 + 0.615385 NA intron (NM_001351305, intron 14 of 31) L1MEg|LINE|L1 22968 NR_033841 200772 Hs.647893 NR_033841 ENSG00000233392 LOC200772 - uncharacterized LOC200772 ncRNA 154.154-2 chr1 41533677 41534078 + 0.615385 NA intron (NM_024503, intron 5 of 8) L2|LINE|L2 -49194 NR_126098 1907 Hs.1407 NM_001956 ENSG00000127129 EDN2 ET-2|ET2|PPET2 endothelin 2 protein-coding 169.538-5 chr2 46444890 46445302 + 0.615385 NA Intergenic AluJr|SINE|Alu 15906 NR_103805 101805491 Hs.304781 NR_103805 ENSG00000187600 LINC02583 - long intergenic non-protein coding RNA 2583 ncRNA 200.846 chr10 58544335 58544672 + 0.615385 NA intron (NM_001080512, intron 1 of 20) intron (NM_001080512, intron 1 of 20) 31631 NM_001080512 80114 Hs.100261 NM_001080512 ENSG00000122870 BICC1 BICC|CYSRD BicC family RNA binding protein 1 protein-coding 195.923-3 chr6 124495041 124495459 + 0.615385 NA intron (NM_001300738, intron 4 of 7) intron (NM_001300738, intron 4 of 7) 212245 NM_001300740 154215 Hs.656604 NM_153355 ENSG00000188580 NKAIN2 FAM77B|NKAIP2|TCBA|TCBA1 sodium/potassium transporting ATPase interacting 2 protein-coding 159.077-6 chr2 23952711 23953112 + 0.615385 NA intron (NM_181713, intron 1 of 6) intron (NM_181713, intron 1 of 6) 12448 NM_181713 165324 Hs.591576 NM_181713 ENSG00000173960 UBXN2A UBXD4 UBX domain protein 2A protein-coding 155.538-5 chr14 47138450 47138861 + 0.615385 NA intron (NM_001113498, intron 4 of 16) intron (NM_001113498, intron 4 of 16) 204591 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 151.692-6 chr3 79108222 79108597 + 0.615385 NA intron (NM_002941, intron 3 of 30) intron (NM_002941, intron 3 of 30) -88950 NM_133631 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding 176.154-2 chr11 61829469 61829930 + 0.615385 NA intron (NM_004265, intron 1 of 11) intron (NM_004265, intron 1 of 11) 1399 NM_004265 9415 Hs.502745 NM_004265 ENSG00000134824 FADS2 D6D|DES6|FADSD6|LLCDL2|SLL0262|TU13 fatty acid desaturase 2 protein-coding 220.769 chr6 42908131 42908792 + 0.615385 NA Intergenic ERVL-E-int|LTR|ERVL -7528 NM_001243168 171558 Hs.169002 NM_138296 ENSG00000171611 PTCRA PT-ALPHA|PTA pre T cell antigen receptor alpha protein-coding 242.231 chr8 34506975 34507548 + 0.615385 NA Intergenic L2a|LINE|L2 -276660 NR_125746 103689844 Hs.590682 NR_125746 ENSG00000254344 LINC01288 TCONS_00014671 long intergenic non-protein coding RNA 1288 ncRNA 176.077 chr1 190586441 190586937 + 0.615385 NA Intergenic Intergenic -38201 NR_033922 440704 NR_033922 ENSG00000231175 LINC01720 - long intergenic non-protein coding RNA 1720 ncRNA 155.077-8 chr15 80194290 80194958 + 0.615385 NA TTS (NM_001352888) TTS (NM_001352888) 41625 NM_000137 2184 Hs.73875 NM_000137 ENSG00000103876 FAH - fumarylacetoacetate hydrolase protein-coding 165.385-2 chr11 131782547 131782893 + 0.615385 NA intron (NM_001352006, intron 2 of 9) L1ME3|LINE|L1 -119164 NR_126159 101929637 Hs.730330 NM_207432 ENSG00000224795 NTM-AS1 C11orf39 NTM antisense RNA 1 ncRNA 157.384-3 chrX 94938772 94939303 + 0.615385 NA Intergenic Intergenic 124189 NR_031667 100313772 NR_031667 ENSG00000221187 MIR548M MIRN548M microRNA 548m ncRNA 165.154-4 chr2 170697685 170697976 + 0.615385 NA Intergenic L1MB2|LINE|L1 16737 NR_027433 440925 Hs.668461 NM_001013712 ENSG00000222033 LINC01124 - long intergenic non-protein coding RNA 1124 ncRNA 214.462 chr10 60910487 60910881 + 0.615385 NA intron (NM_001350906, intron 5 of 12) intron (NM_001350906, intron 5 of 12) 33501 NM_001350910 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding 169.539-2 chr2 16246710 16247237 + 0.615385 NA Intergenic Intergenic 196546 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA 175.769 chr1 90523422 90523811 + 0.615385 NA Intergenic L1MA4A|LINE|L1 -134134 NR_145742 109616984 NR_145742 ENSG00000199666 SNORD3G - small nucleolar RNA, C/D box 3G snoRNA 189.231-2 chr20 16578748 16579169 + 0.615385 NA Intergenic MLT1H|LTR|ERVL-MaLR -5510 NM_001199866 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding 161-3 chr12 14683683 14684171 + 0.615385 NA intron (NM_004963, intron 3 of 26) intron (NM_004963, intron 3 of 26) 12672 NM_004963 2984 Hs.524278 NM_004963 ENSG00000070019 GUCY2C DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR guanylate cyclase 2C protein-coding 181.692-2 chr12 15594246 15594803 + 0.615385 NA intron (NM_030671, intron 13 of 13) (AT)n|Simple_repeat|Simple_repeat 47913 NM_030671 5800 Hs.160871 NM_002848 ENSG00000151490 PTPRO GLEPP1|NPHS6|PTP-OC|PTP-U2|PTPROT|PTPU2|R-PTP-O protein tyrosine phosphatase receptor type O protein-coding 180.308-5 chr6 95464718 95465241 + 0.615385 NA Intergenic L1ME3Cz|LINE|L1 112472 NR_047502 101927288 Hs.616643 NR_047502 ENSG00000261366 MANEA-DT MANEA-AS1 MANEA divergent transcript ncRNA 161.385-5 chr7 48668966 48669328 + 0.615385 NA Intergenic HUERS-P1-int|LTR|ERV1 -255400 NM_152627 168448 Hs.567757 NM_152627 ENSG00000218305 CDC14C CDC14B2|CDC14Bretro cell division cycle 14C protein-coding 228.923-3 chr8 66995776 66996521 + 0.615385 NA intron (NM_001364910, intron 5 of 7) AluJb|SINE|Alu 32403 NM_001348563 286187 Hs.583933 NM_001013626 ENSG00000178125 PPP1R42 LRRC67|TLLR|TLRR|dtr protein phosphatase 1 regulatory subunit 42 protein-coding 159.231-4 chr15 38737128 38737478 + 0.615385 NA Intergenic L1M6|LINE|L1 40705 NR_160786 167.231 chr10 54494357 54494706 + 0.615385 NA intron (NR_134503, intron 1 of 5) MER92B|LTR|ERV1 8301 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 177.154-5 chr4 101896851 101897616 + 0.615385 NA intron (NM_017935, intron 6 of 16) intron (NM_017935, intron 6 of 16) 83391 NM_001083907 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding 175.308-2 chr5 57240672 57241212 + 0.615385 NA intron (NM_001331037, intron 7 of 12) AluSp|SINE|Alu 26868 NM_001127236 65056 Hs.444279 NM_022913 ENSG00000062194 GPBP1 GPBP|SSH6|VASCULIN GC-rich promoter binding protein 1 protein-coding 153.692-7 chr4 136864760 136865198 + 0.615385 NA intron (NR_149105, intron 3 of 3) intron (NR_149105, intron 3 of 3) -328777 NR_134640 729307 Hs.552764 NR_134640 LINC02510 - long intergenic non-protein coding RNA 2510 ncRNA 189.154-2 chr5 162892408 162892924 + 0.615385 NA Intergenic MER30|DNA|hAT-Charlie -544905 NM_001364015 900 Hs.79101 NM_004060 ENSG00000113328 CCNG1 CCNG cyclin G1 protein-coding 151.692-2 chr15 58923998 58924411 + 0.615385 NA intron (NR_135043, intron 1 of 18) intron (NR_135043, intron 1 of 18) 9475 NR_135043 79811 Hs.512932 NM_017968 ENSG00000137776 SLTM Met SAFB like transcription modulator protein-coding 180-2 chr2 53026473 53026891 + 0.615385 NA Intergenic MIR3|SINE|MIR -324067 NR_039630 100616431 NR_039630 ENSG00000264975 MIR4431 - microRNA 4431 ncRNA 161.538-11 chr4 149031035 149031541 + 0.615385 NA Intergenic ERV3-16A3_I-int|LTR|ERVL -88910 NR_134681 105377480 Hs.148699 NR_134681 ENSG00000249317 LOC105377480 - uncharacterized LOC105377480 ncRNA 168.615-2 chr15 88009327 88009774 + 0.615385 NA intron (NM_001007156, intron 14 of 15) MER102c|DNA|hAT-Charlie -63282 NR_162119 113218493 NR_162119 MIR11181 - microRNA 11181 ncRNA 160.615-11 chr2 229335614 229336074 + 0.615385 NA Intergenic Intergenic -64557 NM_001100818 55022 Hs.745038 NM_017933 ENSG00000153823 PID1 HMFN2073|NYGGF4|P-CLI1|PCLI1 phosphotyrosine interaction domain containing 1 protein-coding 206.385-4 chr8 88891478 88892071 + 0.615385 NA Intergenic Intergenic -564291 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 206.615-7 chr5 161234254 161234653 + 0.615385 NA Intergenic Intergenic -295827 NR_027111 285629 Hs.554279 NR_027111 ENSG00000253417 LINC02159 - long intergenic non-protein coding RNA 2159 ncRNA 165.385-13 chr5 7714068 7714521 + 0.615385 NA intron (NM_020546, intron 11 of 24) intron (NM_020546, intron 11 of 24) 136839 NM_001089584 134121 Hs.709979 NM_001089584 ENSG00000215217 C5orf49 - chromosome 5 open reading frame 49 protein-coding 184.692-3 chr4 112697520 112698031 + 0.615385 NA Intergenic AluSq2|SINE|Alu -8243 NM_001354269 287 Hs.620557 NM_001148 ENSG00000145362 ANK2 ANK-2|LQT4|brank-2 ankyrin 2 protein-coding 177.231-9 chr9 108144163 108145055 + 0.615385 NA Intergenic L1MC|LINE|L1 -654840 NM_001314052 9314 Hs.376206 NM_004235 ENSG00000136826 KLF4 EZF|GKLF Kruppel like factor 4 protein-coding 154.769-3 chr12 102499746 102500100 + 0.615385 NA Intergenic L1M2|LINE|L1 -19360 NM_000618 3479 Hs.160562 NM_000618 ENSG00000017427 IGF1 IGF|IGF-I|IGFI|MGF insulin like growth factor 1 protein-coding 173.615 chr4 178195654 178196072 + 0.615385 NA Intergenic L1MEd|LINE|L1 -287927 NR_108093 101928656 Hs.508131 NR_108092 ENSG00000251504 LINC01099 - long intergenic non-protein coding RNA 1099 ncRNA 168.615-4 chr21 29447890 29448187 + 0.615385 NA Intergenic L1ME2z|LINE|L1 -48009 NR_146594 54147 Hs.124532 NR_146594 ENSG00000234293 BACH1-IT3 C21orf8|NCRNA00097 BACH1 intronic transcript 3 ncRNA 209.231 chr10 65631111 65631630 + 0.615385 NA intron (NR_120647, intron 3 of 5) intron (NR_120647, intron 3 of 5) 59945 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 156.615-4 chr18 1183053 1183367 + 0.615385 NA Intergenic MLT1I|LTR|ERVL-MaLR 176419 NR_023927 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 156.692-8 chr4 112542497 112542782 + 0.615385 NA intron (NM_018392, intron 24 of 27) FLAM_A|SINE|Alu -26459 NM_024019 63973 Hs.744415 NM_024019 ENSG00000178403 NEUROG2 Atoh4|Math4A|NGN2|bHLHa8|ngn-2 neurogenin 2 protein-coding 152-3 chr14 79774272 79774622 + 0.615385 NA intron (NR_073547, intron 18 of 20) intron (NR_073547, intron 18 of 20) -436972 NR_038355 100628307 Hs.623865 NR_038355 ENSG00000258766 DIO2-AS1 - DIO2 antisense RNA 1 ncRNA 179.615-3 chr8 84663088 84663413 + 0.615385 NA intron (NM_001354308, intron 3 of 9) L1PA11|LINE|L1 -42677 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 182.769-8 chr3 72780373 72781234 + 0.615385 NA intron (NM_018130, intron 10 of 10) intron (NM_018130, intron 10 of 10) 67642 NM_018130 55164 Hs.606584 NM_018130 ENSG00000144736 SHQ1 GRIM-1|Shq1p SHQ1, H/ACA ribonucleoprotein assembly factor protein-coding 152.539 chr11 95864662 95864970 + 0.615385 NA intron (NM_001243571, intron 6 of 17) intron (NM_001243571, intron 6 of 17) 59291 NM_001243571 8898 Hs.181326 NM_016156 ENSG00000087053 MTMR2 CMT4B|CMT4B1 myotubularin related protein 2 protein-coding 171.231-4 chr4 188603826 188604196 + 0.615385 NA Intergenic Intergenic 148433 NR_033869 401164 Hs.435756 NR_033869 ENSG00000249378 LINC01060 - long intergenic non-protein coding RNA 1060 ncRNA 171.385-5 chrX 95846558 95846866 + 0.615385 NA Intergenic Intergenic 491190 NR_003539 643486 Hs.590806 NR_003539 ENSG00000271209 BRDTP1 - bromodomain testis associated pseudogene 1 pseudo 185.846 chr1 73755880 73756299 + 0.615385 NA Intergenic MER21B|LTR|ERVL 81410 NR_146300 109729166 Hs.563902 NR_146300 LINC02238 - long intergenic non-protein coding RNA 2238 ncRNA 158.231-4 chr17 12432586 12432843 + 0.615385 NA Intergenic Intergenic -117254 NR_034145 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA 192-3 chr2 83447371 83447754 + 0.615385 NA Intergenic Intergenic -75252 NR_146482 101928031 Hs.547548 NR_146482 ENSG00000232548 LINC01809 - long intergenic non-protein coding RNA 1809 ncRNA 161.923-6 chr8 131281488 131281910 + 0.615385 NA Intergenic Intergenic -240790 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 169.231-6 chr3 179860252 179860629 + 0.615385 NA intron (NR_146167, intron 6 of 13) MER5B|DNA|hAT-Charlie -37754 NR_110059 101928790 Hs.667247 NR_110059 ENSG00000244302 PEX5L-AS2 - PEX5L antisense RNA 2 ncRNA 167.692-7 chr7 30617296 30617884 + 0.615385 NA intron (NM_002047, intron 10 of 16) intron (NM_002047, intron 10 of 16) 22712 NM_002047 2617 Hs.404321 NM_002047 ENSG00000106105 GARS CMT2D|DSMAV|GlyRS|HMN5|SMAD1 glycyl-tRNA synthetase protein-coding 191.154-5 chr6 65077268 65077775 + 0.615385 NA intron (NM_001292009, intron 12 of 43) intron (NM_001292009, intron 12 of 43) -223897 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 195.923 chr12 114082583 114082973 + 0.615385 NA Intergenic L1MEc|LINE|L1 -116453 NM_001146699 9904 Hs.7482 NM_016196 ENSG00000122965 RBM19 Mrd1 RNA binding motif protein 19 protein-coding 169.769-7 chr6 66882478 66883091 + 0.615385 NA Intergenic Intergenic 1094905 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 177.462-4 chr5 119522277 119522651 + 0.615385 NA intron (NM_001199291, intron 18 of 24) L1PA5|LINE|L1 69967 NM_001199291 3295 Hs.406861 NM_000414 ENSG00000133835 HSD17B4 DBP|MFE-2|MPF-2|PRLTS1|SDR8C1 hydroxysteroid 17-beta dehydrogenase 4 protein-coding 222.385 chr10 73044214 73044613 + 0.615385 NA intron (NM_000917, intron 8 of 14) intron (NM_000917, intron 8 of 14) 52561 NM_001142596 5033 Hs.500047 NM_000917 ENSG00000122884 P4HA1 P4HA prolyl 4-hydroxylase subunit alpha 1 protein-coding 199.769-2 chr10 64789686 64790188 + 0.615385 NA Intergenic Intergenic -35591 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 173.846 chr1 233479356 233479690 + 0.615385 NA Intergenic Intergenic -134583 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding 161.077-13 chr7 62637214 62637677 + 0.615385 NA Intergenic ALR/Alpha|Satellite|centr 666611 NR_003952 643955 Hs.583308 NR_003952 ENSG00000185037 ZNF733P ZNF733 zinc finger protein 733, pseudogene pseudo 182.385-2 chr3 192847922 192848463 + 0.615385 NA intron (NM_178496, intron 1 of 1) intron (NM_178496, intron 1 of 1) 69664 NM_178496 151963 Hs.151443 NM_178496 ENSG00000180611 MB21D2 C3orf59 Mab-21 domain containing 2 protein-coding 187.846 chr1 38735332 38735944 + 0.615385 NA Intergenic L2c|LINE|L2 124134 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding 156.154-12 chr8 62302585 62303154 + 0.615385 NA intron (NM_001304533, intron 1 of 6) intron (NM_001304533, intron 1 of 6) 54015 NM_001304533 286183 Hs.654662 NM_173688 ENSG00000185942 NKAIN3 FAM77D sodium/potassium transporting ATPase interacting 3 protein-coding 190.692-2 chr14 76030691 76031014 + 0.615385 NA intron (NR_045664, intron 3 of 7) L1MC5a|LINE|L1 45089 NM_001255995 112752 Hs.532626 NM_052873 ENSG00000119650 IFT43 C14orf179|CED3|RP81|SRTD18 intraflagellar transport 43 protein-coding 159.077-9 chr6 39350120 39350469 + 0.615385 NA intron (NM_001289020, intron 18 of 21) intron (NM_001289020, intron 18 of 21) -27326 NM_001363784 83795 Hs.287765 NM_032115 ENSG00000095981 KCNK16 K2p16.1|TALK-1|TALK1 potassium two pore domain channel subfamily K member 16 protein-coding 152.308 chr11 123991782 123992180 + 0.615385 NA Intergenic Intergenic 3180 NM_001355219 79490 NM_001355219 ENSG00000198674 OR10G6 OR10G6P|OR10G6Q olfactory receptor family 10 subfamily G member 6 protein-coding 156.769-6 chr17 72076845 72077362 + 0.615385 NA intron (NR_103738, intron 5 of 6) L2b|LINE|L2 4770 NR_110827 101928205 Hs.620808 NR_110827 ENSG00000226101 LINC02097 - long intergenic non-protein coding RNA 2097 ncRNA 174.769-9 chr7 89063998 89064350 + 0.615385 NA intron (NM_181646, intron 1 of 3) LTR16A|LTR|ERVL -268437 NM_152706 219557 Hs.112877 NM_152706 ENSG00000164645 TEX47 C7orf62 testis expressed 47 protein-coding 164-7 chr3 174306820 174307205 + 0.615385 NA Intergenic Intergenic -386216 NR_046664 100874010 Hs.624265 NR_046664 ENSG00000228213 NLGN1-AS1 - NLGN1 antisense RNA 1 ncRNA 155.308-5 chr2 103686681 103686988 + 0.615385 NA Intergenic L1MEg|LINE|L1 -702405 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 157.538-5 chr16 63053276 63053605 + 0.615385 NA Intergenic Intergenic -1017002 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 184.077 chr16 8399033 8399566 + 0.615385 NA Intergenic AluSz|SINE|Alu 190539 NM_001146336 283953 Hs.150849 NM_001146336 ENSG00000232258 TMEM114 - transmembrane protein 114 protein-coding 167.077-3 chr15 23742497 23742918 + 0.615385 NA Intergenic L1M4|LINE|L1 -55402 NM_002487 4692 Hs.50130 NM_002487 ENSG00000182636 NDN HsT16328|PWCR necdin, MAGE family member protein-coding 192.308-2 chr15 24669086 24669652 + 0.615385 NA Intergenic Intergenic -6025 NM_018958 23742 Hs.649663 NM_018958 ENSG00000185823 NPAP1 C15orf2 nuclear pore associated protein 1 protein-coding 152.923-9 chr2 202286730 202287234 + 0.615385 NA intron (NM_015934, intron 5 of 14) intron (NM_015934, intron 5 of 14) -4335 NR_003694 100113392 Hs.693442 NR_003694 ENSG00000271852 SNORD11B - small nucleolar RNA, C/D box 11B snoRNA 163.077 chr1 92191592 92192121 + 0.615385 NA Intergenic MER57D|LTR|ERV1 22932 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding 182.461 chr4 12958215 12958672 + 0.615385 NA Intergenic Intergenic 525897 NM_001017979 9364 Hs.656060 NM_004249 ENSG00000157869 RAB28 CORD18 RAB28, member RAS oncogene family protein-coding 184.385-2 chr2 27917909 27918329 + 0.615385 NA intron (NM_199193, intron 3 of 13) L1MB3|LINE|L1 -27005 NR_028308 100302650 Hs.729719 NR_028308 BABAM2-AS1 BRE-AS1 BABAM2 antisense RNA 1 ncRNA 160-9 chr8 134658297 134658737 + 0.615385 NA intron (NM_020863, intron 1 of 15) intron (NM_020863, intron 1 of 15) 38038 NM_001167583 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding 205.154 chr15 59727089 59727588 + 0.615385 NA Intergenic L2c|LINE|L2 -38018 NM_001368057 663 Hs.592515 NM_004330 ENSG00000140299 BNIP2 BNIP-2|NIP2 BCL2 interacting protein 2 protein-coding 204.923-3 chr2 66457091 66457685 + 0.615385 NA intron (NM_002398, intron 6 of 12) intron (NM_002398, intron 6 of 12) -17058 NR_046625 100873998 Hs.734698 NR_046625 ENSG00000230749 MEIS1-AS2 MEIS1-AS1 MEIS1 antisense RNA 2 ncRNA 196-6 chr14 45984690 45985171 + 0.615385 NA Intergenic L1MA7|LINE|L1 -79229 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 228.538-2 chr6 151982783 151983359 + 0.615385 NA intron (NM_001122741, intron 5 of 8) Charlie5|DNA|hAT-Charlie 173964 NM_001328100 2099 Hs.208124 NM_000125 ENSG00000091831 ESR1 ER|ESR|ESRA|ESTRR|Era|NR3A1 estrogen receptor 1 protein-coding 156.461-2 chr5 29870958 29871455 + 0.615385 NA Intergenic L1MD3|LINE|L1 -9354 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 151.539 chr9 89684891 89685161 + 0.615385 NA intron (NR_024280, intron 3 of 5) intron (NR_024280, intron 3 of 5) 45243 NR_024280 100129066 Hs.125947 NR_024280 ENSG00000237372 UNQ6494 - uncharacterized LOC100129066 ncRNA 188.923 chr10 114536908 114537501 + 0.615385 NA intron (NM_001352440, intron 6 of 20) (CT)n|Simple_repeat|Simple_repeat -10291 NM_001322893 3983 Hs.438236 NM_002313 ENSG00000099204 ABLIM1 ABLIM|LIMAB1|LIMATIN|abLIM-1 actin binding LIM protein 1 protein-coding 152.462-2 chr2 104456337 104456778 + 0.615385 NA intron (NR_015399, intron 1 of 3) L1MD2|LINE|L1 22210 NR_015399 150568 Hs.107284 NR_015399 ENSG00000235597 LINC01102 - long intergenic non-protein coding RNA 1102 ncRNA 185-3 chr5 24422372 24422879 + 0.615385 NA Intergenic L1M5|LINE|L1 222353 NM_001317222 1008 Hs.92489 NM_006727 ENSG00000040731 CDH10 - cadherin 10 protein-coding 237.077 chr9 27188106 27188729 + 0.615385 NA intron (NM_001290077, intron 8 of 21) intron (NM_001290077, intron 8 of 21) 79276 NM_001290077 7010 Hs.89640 NM_000459 ENSG00000120156 TEK CD202B|GLC3E|TIE-2|TIE2|VMCM|VMCM1 TEK receptor tyrosine kinase protein-coding 158.462-2 chr12 45605826 45606391 + 0.615385 NA Intergenic MIRb|SINE|MIR 121813 NR_028408 400027 Hs.597122 NR_028408 LINC00938 - long intergenic non-protein coding RNA 938 ncRNA 219.154 chr5 128584048 128584634 + 0.615385 NA Intergenic MLT1K|LTR|ERVL-MaLR -46096 NM_001999 2201 Hs.519294 NM_001999 ENSG00000138829 FBN2 CCA|DA9|EOMD fibrillin 2 protein-coding 158.308-11 chr6 69972599 69972894 + 0.615385 NA intron (NM_001858, intron 11 of 50) intron (NM_001858, intron 11 of 50) 106190 NM_001858 1310 Hs.444842 NM_001858 ENSG00000082293 COL19A1 COL9A1L|D6S228E collagen type XIX alpha 1 chain protein-coding 170.769-4 chr12 45773775 45774201 + 0.615385 NA intron (NM_152641, intron 3 of 20) intron (NM_152641, intron 3 of 20) 44279 NM_001347839 196528 Hs.317304 NM_152641 ENSG00000189079 ARID2 BAF200|CSS6|p200 AT-rich interaction domain 2 protein-coding 192.462 chr10 67162123 67162609 + 0.615385 NA intron (NM_001127384, intron 7 of 17) L1MD2|LINE|L1 150100 NR_111909 347731 Hs.652155 NM_178011 ENSG00000198739 LRRTM3 - leucine rich repeat transmembrane neuronal 3 protein-coding 165.077-3 chr16 17191279 17191761 + 0.615385 NA intron (NM_022166, intron 5 of 11) intron (NM_022166, intron 5 of 11) 57016 NR_135179 102723692 Hs.737758 NR_135179 ENSG00000261448 LOC102723692 - uncharacterized LOC102723692 ncRNA 154.308-6 chr6 117822353 117822780 + 0.615385 NA Intergenic Intergenic -84698 NM_001029858 222553 Hs.654841 NM_001029858 ENSG00000196376 SLC35F1 C6orf169|dJ230I3.1 solute carrier family 35 member F1 protein-coding 181.846-9 chr7 119822232 119822578 + 0.615385 NA intron (NR_131960, intron 1 of 4) L1M2|LINE|L1 84970 NR_131961 105375475 Hs.566654 NR_131960 ENSG00000225546 LINC02476 LVCAT5 long intergenic non-protein coding RNA 2476 ncRNA 162.923-7 chr6 55828018 55828577 + 0.615385 NA intron (NM_001329754, intron 1 of 5) intron (NM_001329754, intron 1 of 5) 47293 NM_021073 653 Hs.296648 NM_021073 ENSG00000112175 BMP5 - bone morphogenetic protein 5 protein-coding 153.692-8 chr5 84590554 84590874 + 0.615385 NA Intergenic MLT1E1A|LTR|ERVL-MaLR -205834 NM_005711 10085 Hs.482730 NM_005711 ENSG00000164176 EDIL3 DEL1 EGF like repeats and discoidin domains 3 protein-coding 168.539-5 chr7 19087590 19088078 + 0.615385 NA Intergenic L1MB8|LINE|L1 29802 NM_000474 7291 Hs.66744 NM_000474 ENSG00000122691 TWIST1 ACS3|BPES2|BPES3|CRS|CRS1|CSO|SCS|SWCOS|TWIST|bHLHa38 twist family bHLH transcription factor 1 protein-coding 157.308-4 chr17 62883376 62883796 + 0.615385 NA Intergenic Intergenic -60629 NR_030363 693218 NR_030363 ENSG00000207552 MIR633 MIRN633|hsa-mir-633 microRNA 633 ncRNA 171.384-4 chr2 184800341 184800893 + 0.615385 NA intron (NM_194250, intron 1 of 3) L1MC1|LINE|L1 202088 NM_194250 91752 Hs.159528 NM_194250 ENSG00000170396 ZNF804A C2orf10 zinc finger protein 804A protein-coding 208.923 chr17 76593213 76593625 + 0.615385 NA Intergenic MER21B|LTR|ERVL -7559 NM_006456 10610 Hs.592105 NM_006456 ENSG00000070731 ST6GALNAC2 SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding 156.846 chr3 36757719 36758221 + 0.615385 NA Intergenic Intergenic -18109 NM_033403 85443 Hs.631907 NM_033403 ENSG00000163673 DCLK3 CLR|DCAMKL3|DCDC3C|DCK3 doublecortin like kinase 3 protein-coding 156.154-3 chr11 102217954 102218391 + 0.615385 NA intron (NM_001130145, intron 6 of 8) intron (NM_001130145, intron 6 of 8) -99312 NM_182962 330 Hs.127799 NM_001165 ENSG00000023445 BIRC3 AIP1|API2|CIAP2|HAIP1|HIAP1|IAP-1|MALT2|MIHC|RNF49|c-IAP2 baculoviral IAP repeat containing 3 protein-coding 192.615-4 chr5 112633974 112634575 + 0.615385 NA Intergenic Intergenic 5838 NR_104672 102467214 Hs.124613 NR_104672 LINC02200 - long intergenic non-protein coding RNA 2200 ncRNA 158.615-6 chr3 1909367 1909779 + 0.615385 NA Intergenic Intergenic -189230 NM_001350095 152330 Hs.298705 NM_175607 ENSG00000144619 CNTN4 AXCAM|BIG-2 contactin 4 protein-coding 172.615-5 chr20 5560931 5561340 + 0.615385 NA intron (NM_019593, intron 16 of 19) intron (NM_019593, intron 16 of 19) 49871 NM_019593 56261 Hs.636359 NM_019593 ENSG00000125772 GPCPD1 EDI3|GDE5|GDPD6|PREI4 glycerophosphocholine phosphodiesterase 1 protein-coding 189.923 chr1 96675416 96675971 + 0.615385 NA Intergenic L1MC1|LINE|L1 -45912 NM_001300988 58155 Hs.596061 NM_021190 ENSG00000117569 PTBP2 PTBLP|brPTB|nPTB polypyrimidine tract binding protein 2 protein-coding 192.615-3 chr22 26013533 26014115 + 0.615385 NA intron (NM_001318245, intron 42 of 43) L1ME3A|LINE|L1 -155638 NM_021115 23544 Hs.194766 NM_021115 ENSG00000100095 SEZ6L - seizure related 6 homolog like protein-coding 186.231 chr4 137717223 137717748 + 0.615385 NA Intergenic Intergenic 171754 NR_146553 105377443 Hs.135587 NR_146553 ENSG00000251632 LINC02172 - long intergenic non-protein coding RNA 2172 ncRNA 161.615-5 chr10 103978147 103978428 + 0.615385 NA intron (NM_001304743, intron 1 of 17) intron (NM_001304743, intron 1 of 17) 11147 NM_014720 9748 Hs.591922 NM_014720 ENSG00000065613 SLK LOSK|STK2|bA16H23.1|se20-9 STE20 like kinase protein-coding 171.308-4 chr3 64215370 64215803 + 0.615385 NA intron (NM_001370528, intron 1 of 7) intron (NM_001370528, intron 1 of 7) 9880 NM_198859 166336 Hs.148105 NM_198859 ENSG00000163637 PRICKLE2 EPM5 prickle planar cell polarity protein 2 protein-coding 190.462-3 chr15 42848412 42848814 + 0.615385 NA intron (NM_173500, intron 3 of 14) AluSp|SINE|Alu 72165 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding 161.308-13 chr8 85230036 85230527 + 0.615385 NA Intergenic Intergenic -9859 NM_001099671 401466 Hs.443072 NM_001099670 ENSG00000176731 RBIS C8orf59 ribosomal biogenesis factor protein-coding 156.769-5 chr14 60453745 60454128 + 0.615385 NA intron (NM_174978, intron 16 of 17) L1M5|LINE|L1 32127 NM_174978 317761 Hs.335754 NM_174978 ENSG00000179008 C14orf39 Six6os1 chromosome 14 open reading frame 39 protein-coding 190.461 chr5 164025014 164025584 + 0.615385 NA Intergenic L1PA15|LINE|L1 442103 NR_105064 101927835 Hs.735171 NR_105064 ENSG00000253236 LINC02143 - long intergenic non-protein coding RNA 2143 ncRNA 183.077-4 chr3 103799430 103799814 + 0.615385 NA Intergenic Intergenic -275506 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 157.692-9 chr5 152529373 152529981 + 0.615385 NA Intergenic L2a|LINE|L2 -124398 NM_020167 56923 Hs.731911 NM_020167 ENSG00000132911 NMUR2 FM-4|FM4|NMU-R2|NMU2R|TGR-1|TGR1 neuromedin U receptor 2 protein-coding 165.231-2 chr14 25124017 25124442 + 0.615385 NA Intergenic Intergenic -73932 NM_001351941 29091 Hs.508958 NM_014178 ENSG00000168952 STXBP6 HSPC156|amisyn syntaxin binding protein 6 protein-coding 173.231-2 chr14 51153699 51154016 + 0.615385 NA Intergenic Ricksha_c|DNA|MULE-MuDR -58153 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding 175.846 chr10 76634298 76634725 + 0.615385 NA Intergenic Intergenic -253533 NR_120655 101929328 Hs.664552 NR_120655 ENSG00000236467 KCNMA1-AS1 - KCNMA1 antisense RNA 1 ncRNA 155.692-4 chr2 240429460 240429774 + 0.615385 NA Intergenic Intergenic -6046 NM_002081 2817 Hs.328232 NM_002081 ENSG00000063660 GPC1 glypican glypican 1 protein-coding 228.154 chr5 85396566 85397071 + 0.615385 NA Intergenic Intergenic -885626 NR_003719 285622 Hs.449272 NR_003719 NBPF22P - NBPF member 22, pseudogene pseudo 167.385-4 chr19 38275080 38275396 + 0.615385 NA intron (NM_001166103, intron 1 of 5) Tigger6b|DNA|TcMar-Tigger 10665 NM_001166103 10653 Hs.31439 NM_021102 ENSG00000167642 SPINT2 DIAR3|HAI-2|HAI2|Kop|PB serine peptidase inhibitor, Kunitz type 2 protein-coding 186.308-5 chr8 83958063 83958552 + 0.615385 NA Intergenic L1M1|LINE|L1 -224480 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 201.539 chr17 28193880 28194264 + 0.615385 NA intron (NM_016231, intron 10 of 10) intron (NM_016231, intron 10 of 10) -32491 NR_003064 23615 Hs.157195 NM_021093 ENSG00000237575 PYY2 - peptide YY 2 (pseudogene) pseudo 204.231-4 chr4 57222718 57223117 + 0.615385 NA Intergenic L1PB3|LINE|L1 -112532 NM_001253835 3490 Hs.479808 NM_001553 ENSG00000163453 IGFBP7 AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF insulin like growth factor binding protein 7 protein-coding 166 chr1 113619921 113620256 + 0.615385 NA intron (NM_001142782, intron 8 of 20) intron (NM_001142782, intron 8 of 20) 139067 NM_006608 10745 Hs.655824 NM_006608 ENSG00000116793 PHTF1 PHTF putative homeodomain transcription factor 1 protein-coding 177.231-4 chr3 83998302 83998816 + 0.615385 NA Intergenic Intergenic 871016 NR_033860 440970 Hs.411049 NR_033860 ENSG00000242641 LINC00971 - long intergenic non-protein coding RNA 971 ncRNA 153.539 chr12 22306852 22307217 + 0.615385 NA intron (NM_003034, intron 1 of 4) HAL1|LINE|L1 27680 NM_003034 6489 Hs.408614 NM_003034 ENSG00000111728 ST8SIA1 GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 protein-coding 178.923-7 chr22 33595070 33595499 + 0.615385 NA intron (NM_133642, intron 5 of 14) L3|LINE|CR1 109636 NR_145833 109616998 NR_145833 ENSG00000253007 SNORA50B - small nucleolar RNA, H/ACA box 50B snoRNA 171.692-3 chr13 56698094 56698628 + 0.615385 NA Intergenic Intergenic -442557 NM_001130404 729233 Hs.723090 NM_001130404 ENSG00000204918 PRR20B PRR20|PRR20A|PRR20C|PRR20D|PRR20E proline rich 20B protein-coding 159.692-5 chr17 33338389 33338805 + 0.615385 NA intron (NM_001094, intron 1 of 9) MER106A|DNA|hAT-Charlie -45609 NM_183377 40 Hs.368417 NM_001094 ENSG00000108684 ASIC2 ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1 acid sensing ion channel subunit 2 protein-coding 153.231-10 chr20 53732548 53732832 + 0.615385 NA Intergenic AluSx|SINE|Alu 124336 NR_134576 105372672 Hs.259350 NR_134576 ENSG00000235415 LOC105372672 - uncharacterized LOC105372672 ncRNA 224.231 chr21 29995073 29995534 + 0.615385 NA Intergenic Intergenic -55251 NM_001320630 2897 Hs.664641 NM_000830 ENSG00000171189 GRIK1 EAA3|EEA3|GLR5|GLUR5|GluK1|gluR-5 glutamate ionotropic receptor kainate type subunit 1 protein-coding 161.385-6 chr8 85117409 85117768 + 0.615385 NA intron (NM_033402, intron 6 of 18) intron (NM_033402, intron 6 of 18) 10350 NM_001349636 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding 182.308-5 chr2 59944162 59944694 + 0.615385 NA Intergenic L1MC4|LINE|L1 438608 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 193.231-8 chr8 80562695 80563182 + 0.615385 NA Intergenic L1MB8|LINE|L1 76712 NM_001105539 65986 Hs.591868 NM_023929 ENSG00000205189 ZBTB10 RINZF zinc finger and BTB domain containing 10 protein-coding 220.077 chr3 60809607 60810104 + 0.615385 NA intron (NR_148921, intron 4 of 4) MER5B|DNA|hAT-Charlie -191985 NR_128708 103504735 NR_128708 ENSG00000281426 MIR548BB MI0029321|hsa-mir-548bb microRNA 548bb ncRNA 216.615 chr13 107874456 107875107 + 0.615385 NA Intergenic Intergenic -7285 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding 179.461-4 chr9 27268112 27268620 + 0.615385 NA intron (NR_026679, intron 10 of 16) intron (NR_026679, intron 10 of 16) 14427 NR_026679 158035 Hs.201554 NR_026679 ENSG00000283945 LINC00032 C9orf14|NCRNA00032 long intergenic non-protein coding RNA 32 ncRNA 192.923-9 chr9 31089350 31089746 + 0.615385 NA Intergenic Intergenic 291942 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 181.923-4 chr4 78425145 78425634 + 0.615385 NA intron (NM_001166133, intron 35 of 41) intron (NM_001166133, intron 35 of 41) -126381 NM_005139 306 Hs.480042 NM_005139 ENSG00000138772 ANXA3 ANX3 annexin A3 protein-coding 165.846-7 chr8 22277554 22277980 + 0.615385 NA intron (NM_001135721, intron 1 of 22) intron (NM_001135721, intron 1 of 22) 2200 NM_001135721 55124 Hs.614809 NM_018068 ENSG00000197181 PIWIL2 CT80|HILI|PIWIL1L|mili piwi like RNA-mediated gene silencing 2 protein-coding 165.231-9 chr21 46114460 46114960 + 0.615385 NA intron (NM_058174, intron 5 of 27) intron (NM_058174, intron 5 of 27) 16591 NM_001849 1292 Hs.420269 NM_001849 ENSG00000142173 COL6A2 BTHLM1|PP3610|UCMD1 collagen type VI alpha 2 chain protein-coding 185.154 chr16 76113656 76114071 + 0.615385 NA Intergenic Intergenic -163538 NM_001322178 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding 164.615-8 chr2 125492197 125492571 + 0.615385 NA Intergenic L1MA6|LINE|L1 625601 NR_146970 105373600 Hs.555059 NR_146970 ENSG00000226813 LINC01941 - long intergenic non-protein coding RNA 1941 ncRNA 195.231-5 chr2 107456870 107457342 + 0.615385 NA Intergenic Tigger1|DNA|TcMar-Tigger -72313 NR_146968 105373537 NR_146968 ENSG00000224568 LINC01886 - long intergenic non-protein coding RNA 1886 ncRNA 181.462-3 chrUn_KI270590v1 1959 2381 + 0.615385 NA NA ALR/Alpha|Satellite|centr NA NA 190.769 chr10 21328070 21328385 + 0.615385 NA Intergenic AluSx|SINE|Alu 44723 NR_155751 105376444 Hs.638243 NR_155751 LINC02643 - long intergenic non-protein coding RNA 2643 ncRNA 177.692-3 chr2 40985814 40986343 + 0.615385 NA Intergenic Intergenic -473643 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 153.769-3 chr19 43404769 43405187 + 0.615385 NA intron (NM_031451, intron 3 of 8) L1MEd|LINE|L1 -9912 NM_001130011 83639 Hs.97978 NM_031451 ENSG00000131126 TEX101 CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP testis expressed 101 protein-coding 159.462-6 chrX 42198249 42198607 + 0.615385 NA Intergenic L1MA7|LINE|L1 -274874 NM_001367721 8573 Hs.495984 NM_003688 ENSG00000147044 CASK CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK calcium/calmodulin dependent serine protein kinase protein-coding 151.692 chr10 65966818 65967165 + 0.615385 NA intron (NM_001127384, intron 16 of 17) AluSc8|SINE|Alu 395566 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 167.692-6 chr5 94949919 94950285 + 0.615385 NA intron (NM_001297777, intron 3 of 19) intron (NM_001297777, intron 3 of 19) 131764 NM_001297777 79772 Hs.591248 NM_024717 ENSG00000175471 MCTP1 - multiple C2 and transmembrane domain containing 1 protein-coding 156.385-3 chr8 16305368 16305756 + 0.615385 NA Intergenic Intergenic -112771 NM_138716 4481 Hs.147635 NM_002445 ENSG00000038945 MSR1 CD204|SCARA1|SR-A|SR-AI|SR-AII|SR-AIII|SRA|phSR1|phSR2 macrophage scavenger receptor 1 protein-coding 191.538-3 chr3 33518364 33518908 + 0.615385 NA intron (NM_001365634, intron 31 of 35) intron (NM_001365634, intron 31 of 35) -78231 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding 177.846-2 chr12 75827477 75827922 + 0.615385 NA Intergenic Intergenic 204077 NM_007350 22822 Hs.602085 NM_007350 ENSG00000139289 PHLDA1 DT1P1B11|PHRIP|TDAG51 pleckstrin homology like domain family A member 1 protein-coding 157.846-10 chr20 46080146 46080516 + 0.615385 NA intron (NM_001348150, intron 1 of 8) intron (NM_001348150, intron 1 of 8) 9631 NM_020967 57727 Hs.654991 NM_020967 ENSG00000124160 NCOA5 CIA|bA465L10.6 nuclear receptor coactivator 5 protein-coding 156-13 chr3 150768192 150768622 + 0.615385 NA Intergenic Intergenic -5238 NM_005067 6478 Hs.477959 NM_005067 ENSG00000181788 SIAH2 hSiah2 siah E3 ubiquitin protein ligase 2 protein-coding 197.231-4 chr8 126075990 126076431 + 0.615385 NA Intergenic Intergenic -125013 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 154.154-13 chr3 186020046 186020383 + 0.615385 NA Intergenic L1MC3|LINE|L1 60271 NR_151491 344887 Hs.128803 NR_033752 ENSG00000171658 NMRAL2P NMRAL1P1 NmrA like redox sensor 2, pseudogene pseudo 162.154-3 chr6 103365568 103366112 + 0.615385 NA Intergenic MSTA|LTR|ERVL-MaLR 1493706 NM_001321084 57531 Hs.434340 NM_020771 ENSG00000085382 HACE1 SPPRS HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 protein-coding 166-4 chr17 48935701 48936089 + 0.615385 NA intron (NM_001317193, intron 4 of 6) AluJr|SINE|Alu 8947 NM_007241 11267 Hs.127249 NM_007241 ENSG00000159210 SNF8 Dot3|EAP30|VPS22 SNF8 subunit of ESCRT-II protein-coding 175.231-3 chr4 174095224 174095684 + 0.615385 NA intron (NR_125896, intron 4 of 4) AluJr|SINE|Alu 124944 NR_125896 101928509 Hs.147719 NR_125896 ENSG00000248174 LINC02268 - long intergenic non-protein coding RNA 2268 ncRNA 188-4 chr8 93561579 93562112 + 0.615385 NA intron (NR_033858, intron 6 of 10) intron (NR_033858, intron 6 of 10) 138588 NR_033858 642924 Hs.434882 NR_033858 ENSG00000246662 LINC00535 - long intergenic non-protein coding RNA 535 ncRNA 200.615-2 chr14 82778379 82779101 + 0.615385 NA Intergenic Intergenic 136108 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 167.077-2 chr12 64874977 64875268 + 0.615385 NA exon (NM_015279, exon 12 of 12) exon (NM_015279, exon 12 of 12) -8652 NR_033988 400046 Hs.591032 NR_033988 ENSG00000255693 LINC02389 - long intergenic non-protein coding RNA 2389 ncRNA 191.385-2 chr10 9970161 9970516 + 0.615385 NA Intergenic Intergenic -88384 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA 171.692-5 chr3 99207908 99208248 + 0.615385 NA Intergenic Intergenic -306383 NM_080927 131566 Hs.203691 NM_080927 ENSG00000057019 DCBLD2 CLCP1|ESDN discoidin, CUB and LCCL domain containing 2 protein-coding 176.769-5 chr19 34938496 34938854 + 0.615385 NA intron (NM_194325, intron 4 of 4) intron (NM_194325, intron 4 of 4) 11772 NM_001099438 90075 Hs.657402 NM_194325 ENSG00000168661 ZNF30 KOX28 zinc finger protein 30 protein-coding 175.077-3 chr17 65842334 65842751 + 0.615385 NA intron (NM_001353129, intron 21 of 26) intron (NM_001353129, intron 21 of 26) -15999 NR_126542 201134 Hs.408676 NM_145036 ENSG00000154240 CEP112 CCDC46|MACOCO centrosomal protein 112 protein-coding 158.308-12 chr6 77853776 77854091 + 0.615385 NA intron (NM_001282136, intron 4 of 4) intron (NM_001282136, intron 4 of 4) 200894 NM_001322247 101928601 Hs.544538 NM_001282136 ENSG00000269964 MEI4 - meiotic double-stranded break formation protein 4 protein-coding 158.461-3 chr4 101491042 101491523 + 0.615385 NA Intergenic L1PA15-16|LINE|L1 143505 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 190.462-2 chr13 48015181 48015621 + 0.615385 NA Intergenic Intergenic -14075 NM_003850 8803 Hs.743361 NM_003850 ENSG00000136143 SUCLA2 A-BETA|A-SCS|MTDPS5|SCS-betaA succinate-CoA ligase ADP-forming beta subunit protein-coding 166.769-2 chr10 65857897 65858443 + 0.615385 NA Intergenic Intergenic 286745 NR_120647 101928913 Hs.568857 NR_120647 LINC01515 - long intergenic non-protein coding RNA 1515 ncRNA 173.231 chr11 94470552 94471074 + 0.615385 NA intron (NM_001330347, intron 8 of 19) intron (NM_001330347, intron 8 of 19) -4233 NR_031630 100302275 NR_031630 ENSG00000221230 MIR548L MIRN548L|hsa-mir-548l microRNA 548l ncRNA 157.462-9 chr8 120382621 120382984 + 0.615385 NA Intergenic Intergenic 62348 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding 194.231-2 chr8 77066045 77066438 + 0.615385 NA Intergenic Intergenic -65197 NM_001172086 5828 Hs.437966 NM_000318 ENSG00000164751 PEX2 PAF1|PBD5A|PBD5B|PMP3|PMP35|PXMP3|RNF72|ZWS3 peroxisomal biogenesis factor 2 protein-coding 165.077-8 chr9 122540841 122541228 + 0.615385 NA Intergenic MER67D|LTR|ERV1 -12078 NM_001004457 138882 Hs.632682 NM_001004457 ENSG00000171501 OR1N2 OR9-23 olfactory receptor family 1 subfamily N member 2 protein-coding 154.923 chr1 63540630 63541022 + 0.615385 NA intron (NM_032437, intron 6 of 13) intron (NM_032437, intron 6 of 13) -8154 NR_002771 79469 Hs.659291 NR_002771 DLEU2L BCMSUNL deleted in lymphocytic leukemia 2 like ncRNA 165.154 chr1 106218489 106218968 + 0.615385 NA Intergenic Intergenic -190475 NR_146609 105378884 Hs.568533 NR_146609 LINC01677 - long intergenic non-protein coding RNA 1677 ncRNA 178.385-3 chr12 63481691 63482089 + 0.615385 NA Intergenic Intergenic 186603 NM_173812 283417 Hs.533644 NM_173812 ENSG00000177990 DPY19L2 SPATA34|SPGF9 dpy-19 like 2 protein-coding 153.385-2 chr20 42761488 42761927 + 0.615385 NA intron (NM_133170, intron 5 of 31) MER5A1|DNA|hAT-Charlie 76224 NR_110004 101927159 Hs.570383 NR_110004 ENSG00000229042 LOC101927159 - uncharacterized LOC101927159 ncRNA 202.462 chr13 40558944 40559315 + 0.615385 NA intron (NM_002015, intron 2 of 2) intron (NM_002015, intron 2 of 2) -78123 NR_024507 646982 Hs.287664 NR_024505 ENSG00000215483 LINC00598 lncFOXO1 long intergenic non-protein coding RNA 598 ncRNA 178.769-2 chr10 102007953 102008442 + 0.615385 NA intron (NM_024541, intron 13 of 25) intron (NM_024541, intron 13 of 25) 47976 NM_024541 79591 Hs.16004 NM_024541 ENSG00000120029 ARMH3 C10orf76 armadillo like helical domain containing 3 protein-coding 179.539-2 chr2 114341389 114341703 + 0.615385 NA Intergenic MIR3|SINE|MIR -101095 NM_001321910 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 342.769 chr14 56379062 56380033 + 0.615385 NA Intergenic Intergenic -134784 NR_135241 101927690 Hs.385477 NR_135241 ENSG00000258803 LOC101927690 - uncharacterized LOC101927690 ncRNA 180.692-4 chr15 89633583 89634116 + 0.615385 NA exon (NM_198525, exon 12 of 19) exon (NM_198525, exon 12 of 19) 21618 NM_198525 374654 Hs.513134 NM_198525 ENSG00000166813 KIF7 ACLS|AGBK|HLS2|JBTS12|UNQ340 kinesin family member 7 protein-coding 152.923-7 chr18 2763773 2764137 + 0.615385 NA intron (NM_015295, intron 37 of 47) intron (NM_015295, intron 37 of 47) -83051 NM_032048 84034 Hs.532815 NM_032048 ENSG00000132205 EMILIN2 EMILIN-2|FOAP-10 elastin microfibril interfacer 2 protein-coding 162.077-3 chr12 47801595 47801959 + 0.615385 NA intron (NM_001308090, intron 1 of 24) intron (NM_001308090, intron 1 of 24) 18126 NM_001098416 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding 165.539-3 chr6 46447544 46447866 + 0.615385 NA intron (NM_001251973, intron 2 of 4) L1MA8|LINE|L1 43618 NM_001251974 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding 185.231-3 chr20 43444820 43445182 + 0.615385 NA Intergenic Tigger3a|DNA|TcMar-Tigger -12895 NM_006275 6431 Hs.684950 NM_006275 ENSG00000124193 SRSF6 B52|HEL-S-91|SFRS6|SRP55 serine and arginine rich splicing factor 6 protein-coding 241.231 chr8 141302494 141302995 + 0.615385 NA Intergenic Intergenic -37805 NR_024441 731779 Hs.586414 NR_024441 ENSG00000253595 LINC01300 - long intergenic non-protein coding RNA 1300 ncRNA 173.538-2 chr1 209119913 209120463 + 0.615385 NA Intergenic L1M4a1|LINE|L1 147734 NR_146915 105372894 Hs.98665 NR_146915 ENSG00000236950 LINC01774 - long intergenic non-protein coding RNA 1774 ncRNA 278.692 chr3 119713602 119714201 + 0.615385 NA intron (NM_033364, intron 5 of 17) L1ME4a|LINE|L1 10879 NM_001320318 89876 Hs.341906 NM_033364 ENSG00000183833 MAATS1 AAT1|AAT1alpha|C3orf15|CFAP91|CaM-IP2|SPATA26 MYCBP associated and testis expressed 1 protein-coding 247.462-2 chr4 49154111 49154990 + 0.615385 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 167908 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 166.308-5 chr5 98245540 98246178 + 0.615385 NA Intergenic Intergenic -84620 NR_146477 105379098 Hs.566306 NR_146477 LINC01846 - long intergenic non-protein coding RNA 1846 ncRNA 229.846 chr4 56268587 56269103 + 0.615385 NA intron (NM_020722, intron 2 of 10) intron (NM_020722, intron 2 of 10) 98650 NM_020722 57482 Hs.596667 NM_020722 ENSG00000109265 KIAA1211 CRAD KIAA1211 protein-coding 157.385-4 chr3 160656377 160656826 + 0.615385 NA Intergenic L1MA2|LINE|L1 -20559 NM_025047 80117 Hs.287702 NM_025047 ENSG00000179674 ARL14 ARF7 ADP ribosylation factor like GTPase 14 protein-coding 184.615-6 chrX 42926443 42926817 + 0.615385 NA Intergenic L1MA3|LINE|L1 -148467 NM_025210 80316 Hs.127689 NM_025210 ENSG00000102055 PPP1R2C I-4|PPP1R2P9 PPP1R2C family member C protein-coding 261.923 chr6 50089711 50090598 + 0.615385 NA Intergenic Tigger1|DNA|TcMar-Tigger -40225 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding 186.692-4 chr3 112738044 112738563 + 0.615385 NA intron (NR_110017, intron 4 of 4) intron (NR_110017, intron 4 of 4) 1214 NR_162092 113218483 NR_162092 MIR9900 - microRNA 9900 ncRNA 155.769-13 chrX 82632974 82633328 + 0.615385 NA Intergenic L1MA3|LINE|L1 -875139 NM_000307 5456 Hs.2229 NM_000307 ENSG00000196767 POU3F4 BRAIN-4|BRN-4|BRN4|DFN3|DFNX2|OCT-9|OTF-9|OTF9 POU class 3 homeobox 4 protein-coding 158.769-4 chr17 61679517 61679988 + 0.615385 NA 3' UTR (NM_032043, exon 20 of 20) 3' UTR (NM_032043, exon 20 of 20) -88533 NM_199290 342538 Hs.591178 NM_199290 ENSG00000253506 NACA2 ANAC|NACAL nascent polypeptide associated complex subunit alpha 2 protein-coding 193.769 chr10 33497478 33497862 + 0.615385 NA Intergenic Intergenic -162765 NM_001330068 8829 Hs.131704 NM_003873 ENSG00000099250 NRP1 BDCA4|CD304|NP1|NRP|VEGF165R neuropilin 1 protein-coding 186.923-10 chr5 19746736 19747203 + 0.615385 NA exon (NM_001349560, exon 4 of 13) exon (NM_001349560, exon 4 of 13) 139303 NM_001291957 1016 Hs.317632 NM_004934 ENSG00000145526 CDH18 CDH14|CDH14L|CDH24 cadherin 18 protein-coding 156.769-3 chr12 58764643 58765143 + 0.615385 NA intron (NR_120452, intron 1 of 7) intron (NR_120452, intron 1 of 7) 16823 NR_120452 101927653 Hs.130744 NR_120452 ENSG00000257259 LINC02388 - long intergenic non-protein coding RNA 2388 ncRNA 186 chr1 50460058 50460536 + 0.615385 NA intron (NM_007051, intron 18 of 18) L2c|LINE|L2 -36854 NM_032110 63950 Hs.334481 NM_032110 ENSG00000142700 DMRTA2 - DMRT like family A2 protein-coding 218.461 chr12 55174257 55175052 + 0.615385 NA Intergenic L1MC|LINE|L1 44885 NM_001005243 441639 Hs.553827 NM_001005243 ENSG00000170605 OR9K2 OR12-2 olfactory receptor family 9 subfamily K member 2 protein-coding 158.615-8 chr5 26021309 26021840 + 0.615385 NA Intergenic A-rich|Low_complexity|Low_complexity 830621 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 155.077-3 chr10 29732782 29733073 + 0.615385 NA intron (NM_001323599, intron 1 of 38) intron (NM_001323599, intron 1 of 38) 2874 NM_003174 6840 Hs.499209 NM_003174 ENSG00000197321 SVIL - supervillin protein-coding 152.462 chr14 29923324 29923737 + 0.615385 NA intron (NM_001330069, intron 1 of 18) intron (NM_001330069, intron 1 of 18) 3566 NM_001348390 5587 Hs.508999 NM_002742 ENSG00000184304 PRKD1 CHDED|PKC-MU|PKCM|PKD|PRKCM protein kinase D1 protein-coding 190.462-5 chr3 158663070 158663631 + 0.615385 NA intron (NM_001308164, intron 12 of 18) intron (NM_001308164, intron 12 of 18) 9298 NM_020169 56925 Hs.478067 NM_020169 ENSG00000079257 LXN ECI|TCI latexin protein-coding 187.384-2 chr14 72383151 72383704 + 0.615385 NA intron (NM_001370288, intron 3 of 16) intron (NM_001370288, intron 3 of 16) -133393 NR_106994 102465832 NR_106994 ENSG00000273830 MIR7843 hsa-mir-7843 microRNA 7843 ncRNA 210.308-2 chr12 81786066 81786425 + 0.615385 NA Intergenic Intergenic -26895 NM_003625 8499 Hs.506216 NM_003625 ENSG00000139220 PPFIA2 - PTPRF interacting protein alpha 2 protein-coding 206.615-6 chr4 47709757 47710424 + 0.615385 NA intron (NM_006587, intron 5 of 21) MER45R|DNA|hAT-Tip100 57421 NR_107020 102467004 NR_107020 ENSG00000277388 MIR8053 hsa-mir-8053 microRNA 8053 ncRNA 234.923 chr14 80630006 80630789 + 0.615385 NA intron (NM_152446, intron 19 of 24) intron (NM_152446, intron 19 of 24) 311341 NR_157142 145508 Hs.162889 NM_152446 ENSG00000100629 CEP128 C14orf145|C14orf61|LEDP/132 centrosomal protein 128 protein-coding 163.308-6 chr5 143505496 143506174 + 0.615385 NA Intergenic L2c|LINE|L2 -70323 NM_001018077 2908 Hs.122926 NM_000176 ENSG00000113580 NR3C1 GCCR|GCR|GCRST|GR|GRL nuclear receptor subfamily 3 group C member 1 protein-coding 183.846-3 chr4 161317190 161317749 + 0.615385 NA Intergenic AluSq2|SINE|Alu -705264 NR_125888 101928052 Hs.647993 NR_125888 ENSG00000249419 LOC101928052 - uncharacterized LOC101928052 ncRNA 157.846-13 chr4 90335257 90335586 + 0.615385 NA intron (NM_207491, intron 3 of 7) intron (NM_207491, intron 3 of 7) 100390 NM_207491 401145 Hs.654735 NM_207491 ENSG00000184305 CCSER1 FAM190A coiled-coil serine rich protein 1 protein-coding 179.846-3 chr3 192295312 192295833 + 0.615385 NA intron (NM_004113, intron 4 of 5) intron (NM_004113, intron 4 of 5) 56942 NR_046596 100873986 Hs.581652 NR_046596 ENSG00000231383 FGF12-AS1 - FGF12 antisense RNA 1 ncRNA 207.308-2 chr11 81243970 81244400 + 0.615385 NA Intergenic Intergenic -481382 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 162.308-2 chr2 135651055 135651407 + 0.615385 NA intron (NM_001354199, intron 16 of 25) intron (NM_001354199, intron 16 of 25) -14166 NR_029672 406915 NR_029672 ENSG00000207654 MIR128-1 MIR128A|MIRN128-1|MIRN128A|mir-128-1 microRNA 128-1 ncRNA 153.846-10 chr8 87532349 87532802 + 0.615385 NA Intergenic Intergenic 341440 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 239.077-2 chr5 129628641 129629249 + 0.615385 NA intron (NM_133638, intron 10 of 22) Tigger3a|DNA|TcMar-Tigger -119149 NM_001257308 100127206 Hs.582534 NM_001257308 ENSG00000186367 MINAR2 KIAA1024L membrane integral NOTCH2 associated receptor 2 protein-coding 160.615-10 chr2 137172665 137172999 + 0.615385 NA intron (NM_001316349, intron 7 of 27) MER21C|LTR|ERVL 407287 NM_001316349 80731 Hs.68533 NM_001080427 ENSG00000144229 THSD7B - thrombospondin type 1 domain containing 7B protein-coding 152.769-3 chr19 28209620 28210125 + 0.615385 NA Intergenic Intergenic -396816 NR_135636 102724908 NR_135636 ENSG00000266976 LOC102724908 - uncharacterized LOC102724908 ncRNA 176.077-2 chr1 238798823 238799179 + 0.615385 NA Intergenic Intergenic -312984 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 157.539 chr10 73213430 73213781 + 0.615385 NA intron (NM_173348, intron 7 of 13) L1P4|LINE|L1 33650 NM_015190 23234 Hs.408577 NM_015190 ENSG00000213551 DNAJC9 HDJC9|JDD1|SB73 DnaJ heat shock protein family (Hsp40) member C9 protein-coding 155 chr10 64275839 64276360 + 0.615385 NA Intergenic Intergenic -549429 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 166.846-2 chr14 20613460 20613840 + 0.615385 NA Intergenic Intergenic -22827 NM_001024822 493901 Hs.729466 NM_001024822 ENSG00000258436 RNASE12 HEL-S-85p|RAI1 ribonuclease A family member 12 (inactive) protein-coding 169.846-8 chr9 26483233 26483913 + 0.615385 NA Intergenic L1MA1|LINE|L1 409229 NM_024828 79886 Hs.178357 NM_024828 ENSG00000120159 CAAP1 C9orf82|CAAP caspase activity and apoptosis inhibitor 1 protein-coding 200.231-3 chr5 51937014 51937348 + 0.615385 NA Intergenic Intergenic -70850 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA 174.385 chr1 97442676 97442992 + 0.615385 NA intron (NM_000110, intron 14 of 22) L1ME4c|LINE|L1 346911 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA 164.615-4 chr12 26405499 26406010 + 0.615385 NA intron (NM_002223, intron 52 of 56) AluSx|SINE|Alu 210181 NM_005086 8082 Hs.183428 NM_005086 ENSG00000123096 SSPN DAGA5|KRAG|NSPN|SPN1|SPN2 sarcospan protein-coding 151.615-5 chr17 57045844 57046266 + 0.615385 NA non-coding (NR_002818, exon 1 of 1) non-coding (NR_002818, exon 1 of 1) 577 NR_002818 376412 Hs.132299 NR_002818 ENSG00000261192 RNF126P1 - ring finger protein 126 pseudogene 1 pseudo 222.923 chr1 194067286 194068056 + 0.615385 NA Intergenic MIRc|SINE|MIR 762926 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 224.846-2 chr5 53339451 53339890 + 0.615385 NA Intergenic Intergenic -140959 NM_006350 10468 Hs.9914 NM_006350 ENSG00000134363 FST FS follistatin protein-coding 160.462-5 chr2 81203925 81204206 + 0.615385 NA Intergenic Intergenic 262881 NR_110161 100507201 Hs.98589 NR_110161 ENSG00000235519 LINC01815 - long intergenic non-protein coding RNA 1815 ncRNA 236.308 chr8 104037587 104038232 + 0.615385 NA intron (NR_145710, intron 24 of 29) Tigger3a|DNA|TcMar-Tigger -185426 NM_001282882 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 185.461 chr4 171412141 171412683 + 0.615385 NA Intergenic Intergenic 226228 NR_106730 102466953 NR_106730 ENSG00000278502 MIR6082 hsa-mir-6082 microRNA 6082 ncRNA 179.077-2 chr13 80785610 80786011 + 0.615385 NA Intergenic Intergenic -232581 NR_125770 103724386 Hs.539622 NR_125770 LINC00377 TCONS_00021861 long intergenic non-protein coding RNA 377 ncRNA 191.077-4 chr8 85023926 85024276 + 0.615385 NA Intergenic L1MA8|LINE|L1 -83137 NM_001349637 85444 Hs.193115 NM_033402 ENSG00000133739 LRRCC1 CLERC|CLERK|SAP2|VFL1 leucine rich repeat and coiled-coil centrosomal protein 1 protein-coding 175.846-5 chr2 82335454 82335821 + 0.615385 NA Intergenic L1MD|LINE|L1 -521166 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo 177.923 chr3 77100378 77100939 + 0.615385 NA intron (NM_001290039, intron 2 of 26) L2c|LINE|L2 2646 NM_001128929 6092 Hs.13305 NM_002942 ENSG00000185008 ROBO2 SAX3 roundabout guidance receptor 2 protein-coding 238.846-2 chr9 130041505 130042127 + 0.615385 NA intron (NM_001363755, intron 1 of 15) intron (NM_001363755, intron 1 of 15) 1373 NM_015033 23048 Hs.189409 NM_015033 ENSG00000187239 FNBP1 FBP17 formin binding protein 1 protein-coding 163.385-3 chr16 78862266 78862739 + 0.615385 NA intron (NM_001291997, intron 7 of 7) intron (NM_001291997, intron 7 of 7) 738235 NM_001031804 4094 Hs.134859 NM_005360 ENSG00000178573 MAF AYGRP|CCA4|CTRCT21|c-MAF MAF bZIP transcription factor protein-coding 152.077-8 chr4 101720060 101720345 + 0.615385 NA Intergenic L4_A_Mam|LINE|RTE-X -70405 NM_001127507 55024 Hs.480400 NM_017935 ENSG00000153064 BANK1 BANK B cell scaffold protein with ankyrin repeats 1 protein-coding 170.846-5 chr21 16539500 16539944 + 0.615385 NA promoter-TSS (NR_029480) promoter-TSS (NR_029480) -106 NR_029480 406885 NR_029480 ENSG00000199030 MIRLET7C LET7C|MIRNLET7C|hsa-let-7c|let-7c microRNA let-7c ncRNA 177.385-5 chr4 33265679 33265999 + 0.615385 NA Intergenic Intergenic 774054 NR_125902 101928622 Hs.631687 NR_125902 ENSG00000250954 LOC101928622 - uncharacterized LOC101928622 ncRNA 162.615-4 chr12 53735104 53735510 + 0.615385 NA Intergenic Intergenic -7855 NM_001143682 57658 Hs.156667 NM_020898 ENSG00000012822 CALCOCO1 Cocoa|PP13275|calphoglin calcium binding and coiled-coil domain 1 protein-coding 161.308-9 chr2 76487188 76487656 + 0.615385 NA Intergenic Intergenic -498543 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 199.077-3 chr8 65879063 65879685 + 0.615385 NA Intergenic Intergenic -37310 NM_001242318 5150 Hs.527119 NM_002603 ENSG00000205268 PDE7A HCP1|PDE7 phosphodiesterase 7A protein-coding 220.923 chr10 52799461 52800136 + 0.615385 NA Intergenic L1PB1|LINE|L1 -28098 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 176.461 chr15 42841933 42842269 + 0.615385 NA intron (NM_173500, intron 3 of 14) FLAM_C|SINE|Alu 78677 NM_173500 146057 Hs.646511 NM_173500 ENSG00000128881 TTBK2 SCA11|TTBK tau tubulin kinase 2 protein-coding 167.769-7 chr5 77373050 77373390 + 0.615385 NA intron (NM_001029854, intron 9 of 20) L1ME2z|LINE|L1 119096 NM_018268 55255 Hs.482573 NM_018268 ENSG00000164253 WDR41 MSTP048 WD repeat domain 41 protein-coding 208.615-2 chr5 104429720 104430383 + 0.615385 NA Intergenic Intergenic -669423 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 219.385-2 chr14 76633643 76634026 + 0.615385 NA Intergenic Intergenic -127634 NM_014909 22846 Hs.525479 NM_014909 ENSG00000071246 VASH1 KIAA1036|TTCP 1 vasohibin 1 protein-coding 169.615 chr1 195039971 195040524 + 0.615385 NA Intergenic Intergenic 1048468 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA 157.846-9 chr20 30150913 30151314 + 0.615385 NA Intergenic ALR/Alpha|Satellite|centr 135424 NR_145432 400841 Hs.516959 NM_207470 LINC01597 - long intergenic non-protein coding RNA 1597 ncRNA 217.538-2 chr3 194951238 194951792 + 0.615385 NA Intergenic MIRb|SINE|MIR -143073 NR_104188 100874528 Hs.581659 NR_104188 ENSG00000233303 XXYLT1-AS1 - XXYLT1 antisense RNA 1 ncRNA 173.077-6 chrX 36081107 36081523 + 0.615385 NA intron (NM_001304548, intron 29 of 63) L1P4|LINE|L1 161581 NM_152632 286464 Hs.376425 NM_152632 ENSG00000165164 CFAP47 CHDC2|CXorf22|CXorf30|CXorf59 cilia and flagella associated protein 47 protein-coding 165.385-14 chr5 140864097 140864521 + 0.615385 NA 3' UTR (NM_031859, exon 1 of 1) 3' UTR (NM_031859, exon 1 of 1) -3204 NM_018902 56138 Hs.199343 NM_018902 ENSG00000249158 PCDHA11 CNR7|CNRN7|CNRS7|CRNR7|PCDH-ALPHA11 protocadherin alpha 11 protein-coding 218-3 chr5 30694691 30695149 + 0.615385 NA Intergenic Intergenic -498766 NM_001362435 1004 Hs.124776 NM_004932 ENSG00000113361 CDH6 CAD6|KCAD cadherin 6 protein-coding 153.615-3 chr8 50999725 51000117 + 0.615385 NA Intergenic Intergenic 809524 NM_144651 137902 Hs.444882 NM_144651 ENSG00000147485 PXDNL PMR1|PRM1|VPO2 peroxidasin like protein-coding 199.846-6 chr3 104832196 104832690 + 0.615385 NA Intergenic Intergenic -534270 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 155.769-3 chr13 79217273 79217729 + 0.615385 NA Intergenic Intergenic 188720 NM_001286632 64062 Hs.558528 NM_018605 ENSG00000139746 RBM26 ARRS2|C13orf10|PPP1R132|PRO1777|SE70-2|ZC3H17 RNA binding motif protein 26 protein-coding 214.692-2 chr2 158014944 158015498 + 0.615385 NA intron (NM_001135098, intron 1 of 8) L1MB2|LINE|L1 20042 NM_001135098 151531 Hs.128427 NM_173355 ENSG00000007001 UPP2 UDRPASE2|UP2|UPASE2 uridine phosphorylase 2 protein-coding 163.385-4 chr20 55236823 55237176 + 0.615385 NA Intergenic L1MA9|LINE|L1 -186044 NR_110629 102723578 Hs.446269 NR_110629 ENSG00000235166 LINC01440 - long intergenic non-protein coding RNA 1440 ncRNA 181.846-8 chr6 54872577 54872942 + 0.615385 NA intron (NM_001010872, intron 2 of 4) intron (NM_001010872, intron 2 of 4) 25988 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding 162.769 chr12 16597924 16598407 + 0.615385 NA intron (NM_001243613, intron 3 of 5) intron (NM_001243613, intron 3 of 5) 7214 NM_001243611 55885 Hs.504908 NM_018640 ENSG00000048540 LMO3 RBTN3|RBTNL2|RHOM3|Rhom-3 LIM domain only 3 protein-coding 158.308-6 chr14 58330517 58331301 + 0.615385 NA intron (NM_002892, intron 11 of 23) intron (NM_002892, intron 11 of 23) 32354 NM_002892 5926 Hs.161000 NM_002892 ENSG00000032219 ARID4A RBBP-1|RBBP1|RBP-1|RBP1 AT-rich interaction domain 4A protein-coding 158.923-3 chr11 115384618 115385053 + 0.615385 NA intron (NM_001098517, intron 1 of 8) intron (NM_001098517, intron 1 of 8) -11921 NR_135102 105369507 Hs.664155 NR_135102 ENSG00000256315 LOC105369507 - uncharacterized LOC105369507 ncRNA 206.077-3 chr14 36591165 36592021 + 0.615385 NA Intergenic Intergenic -8979 NM_014360 26257 Hs.234763 NM_014360 ENSG00000136327 NKX2-8 NKX2.8|NKX2H|Nkx2-9 NK2 homeobox 8 protein-coding 166.462 chr1 190135780 190136150 + 0.615385 NA intron (NM_199051, intron 7 of 7) intron (NM_199051, intron 7 of 7) 340045 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 176.846-3 chr3 137380514 137380917 + 0.615385 NA Intergenic L1PA10|LINE|L1 -383600 NM_004189 8403 Hs.248184 NM_004189 ENSG00000168875 SOX14 SOX28 SRY-box transcription factor 14 protein-coding 165.154-7 chr8 82029323 82030167 + 0.615385 NA Intergenic Intergenic -187459 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 193.231-6 chr5 113388014 113388450 + 0.615385 NA intron (NM_001085377, intron 1 of 18) intron (NM_001085377, intron 1 of 18) 46757 NM_032028 83942 Hs.519507 NM_032028 ENSG00000212122 TSSK1B FKSG81|SPOGA4|STK22D|TSK1|TSSK1 testis specific serine kinase 1B protein-coding 170.462-4 chr21 23123255 23123751 + 0.615385 NA Intergenic Intergenic 44219 NR_106746 102466967 NR_106746 ENSG00000275469 MIR6130 hsa-mir-6130 microRNA 6130 ncRNA 160-2 chr1 194072817 194073263 + 0.615385 NA Intergenic Intergenic 768295 NR_125789 101929184 Hs.146728 NR_125789 ENSG00000232077 LINC01031 TCONS_00000361 long intergenic non-protein coding RNA 1031 ncRNA 151.846 chr11 25889480 25889750 + 0.615385 NA Intergenic Intergenic -299508 NM_001313726 63982 Hs.91791 NM_031418 ENSG00000134343 ANO3 C11orf25|DYT23|DYT24|GENX-3947|TMEM16C anoctamin 3 protein-coding 161.846-5 chr2 36074725 36075127 + 0.615385 NA Intergenic Intergenic 280644 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA 159.231-5 chr2 45612720 45613164 + 0.615385 NA Intergenic Intergenic -1675 NM_018079 55133 Hs.14229 NM_018079 ENSG00000068784 SRBD1 - S1 RNA binding domain 1 protein-coding 159.692-4 chr15 41098303 41098791 + 0.615385 NA intron (NM_017553, intron 1 of 35) AluJb|SINE|Alu 17699 NR_104038 54617 Hs.292949 NM_017553 ENSG00000128908 INO80 INO80A|INOC1 INO80 complex ATPase subunit protein-coding 158.615-5 chr20 34644491 34644868 + 0.615385 NA intron (NM_080476, intron 3 of 11) intron (NM_080476, intron 3 of 11) 32606 NM_080476 128869 Hs.253319 NM_080476 ENSG00000101464 PIGU CDC91L1|GAB1 phosphatidylinositol glycan anchor biosynthesis class U protein-coding 165.461-2 chr1 245126939 245127475 + 0.615385 NA Intergenic Intergenic -27778 NM_018012 55083 Hs.143134 NM_018012 ENSG00000162849 KIF26B - kinesin family member 26B protein-coding 171.538-4 chr20 22085463 22085986 + 0.615385 NA Intergenic Intergenic 31634 NR_038394 100270679 Hs.385748 NR_038394 ENSG00000234435 LINC01432 - long intergenic non-protein coding RNA 1432 ncRNA 225.692-2 chr1 63245363 63245782 + 0.615385 NA intron (NR_038252, intron 4 of 11) MLT1A1|LTR|ERVL-MaLR 71685 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA 164.615-12 chr8 67103071 67103467 + 0.615385 NA intron (NM_001363133, intron 7 of 27) intron (NM_001363133, intron 7 of 27) 19421 NM_001291339 79848 Hs.370147 NM_024790 ENSG00000104218 CSPP1 CSPP|JBTS21 centrosome and spindle pole associated protein 1 protein-coding 163.077-2 chr16 66156969 66157320 + 0.615385 NA Intergenic MIR|SINE|MIR -209547 NM_001795 1003 Hs.76206 NM_001795 ENSG00000179776 CDH5 7B4|CD144 cadherin 5 protein-coding 186.231-2 chr8 83952941 83953289 + 0.615385 NA Intergenic LTR40a|LTR|ERVL -229672 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 177.231-7 chr6 54468316 54468903 + 0.615385 NA Intergenic L1PA13|LINE|L1 160168 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding 161.308-4 chr15 63223420 63223758 + 0.615385 NA intron (NM_016530, intron 1 of 7) Tigger3c|DNA|TcMar-Tigger 33983 NM_016530 51762 Hs.389733 NM_016530 ENSG00000166128 RAB8B - RAB8B, member RAS oncogene family protein-coding 172.385-5 chr4 126294122 126294626 + 0.615385 NA Intergenic Intergenic 787115 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA 196-7 chr18 33234379 33234790 + 0.615385 NA intron (NM_001308126, intron 15 of 23) intron (NM_001308126, intron 15 of 23) 205987 NM_001371121 167.616 chr2 50776338 50776742 + 0.615385 NA intron (NM_001330093, intron 4 of 22) intron (NM_001330093, intron 4 of 22) -80278 NR_130470 103504737 NR_130470 ENSG00000216191 MIR8485 hsa-mir-8485 microRNA 8485 ncRNA 180.846 chr11 61433584 61433912 + 0.615385 NA intron (NM_017841, intron 1 of 3) MLT1B|LTR|ERVL-MaLR 3623 NM_017841 54949 Hs.313247 NM_017841 ENSG00000167985 SDHAF2 C11orf79|PGL2|SDH5 succinate dehydrogenase complex assembly factor 2 protein-coding 161.692-5 chr2 216160998 216161435 + 0.615385 NA intron (NM_021141, intron 15 of 20) intron (NM_021141, intron 15 of 20) 51868 NM_021141 7520 Hs.388739 NM_021141 ENSG00000079246 XRCC5 KARP-1|KARP1|KU80|KUB2|Ku86|NFIV X-ray repair cross complementing 5 protein-coding 160.384-3 chr6 46347603 46348115 + 0.615385 NA intron (NR_125838, intron 2 of 3) intron (NR_125838, intron 2 of 3) -21967 NM_005822 10231 Hs.440168 NM_005822 ENSG00000172348 RCAN2 CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4 regulator of calcineurin 2 protein-coding 213.231-4 chr4 94364591 94365123 + 0.615385 NA Intergenic Charlie7|DNA|hAT-Charlie -22021 NM_014485 27306 Hs.128433 NM_014485 ENSG00000163106 HPGDS GSTS|GSTS1|GSTS1-1|PGD2|PGDS hematopoietic prostaglandin D synthase protein-coding 233.231-4 chr8 112302408 112303127 + 0.615385 NA intron (NM_052900, intron 50 of 68) intron (NM_052900, intron 50 of 68) -340726 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 161.077-11 chr6 56643526 56643918 + 0.615385 NA promoter-TSS (NM_001723) promoter-TSS (NM_001723) -833 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding 206 chr2 75482013 75482630 + 0.615385 NA Intergenic L2a|LINE|L2 -41747 NR_110281 101927884 Hs.671110 NR_110281 ENSG00000231172 LOC101927884 - uncharacterized LOC101927884 ncRNA 219.231 chr6 130390147 130390653 + 0.615385 NA intron (NM_001258277, intron 2 of 2) intron (NM_001258277, intron 2 of 2) 24119 NM_001258276 114801 Hs.591341 NM_052913 ENSG00000164484 TMEM200A KIAA1913|TTMA|TTMC transmembrane protein 200A protein-coding 156.692-11 chr7 135948237 135948615 + 0.615385 NA intron (NM_001128619, intron 3 of 3) intron (NM_001128619, intron 3 of 3) 28933 NM_145808 136319 Hs.602015 NM_145808 ENSG00000105887 MTPN GCDP|V-1 myotrophin protein-coding 250.615 chr3 151070578 151071188 + 0.615385 NA intron (NR_024066, intron 4 of 5) (ACT)n|Simple_repeat|Simple_repeat -15915 NM_053002 116931 Hs.744234 NM_053002 ENSG00000144893 MED12L NOPAR|TNRC11L|TRALP|TRALPUSH mediator complex subunit 12L protein-coding 165.461-4 chr9 89899634 89900037 + 0.615385 NA Intergenic Intergenic -69581 NR_109791 101927847 Hs.584312 NR_109791 LOC101927847 - uncharacterized LOC101927847 ncRNA 159.692-2 chr10 99055410 99055908 + 0.615385 NA intron (NM_021828, intron 3 of 11) L1ME2|LINE|L1 -131091 NR_106762 102465253 NR_106762 ENSG00000274056 MIR6507 hsa-mir-6507 microRNA 6507 ncRNA 184-5 chr8 99287676 99288184 + 0.615385 NA intron (NM_017890, intron 19 of 61) L1ME4a|LINE|L1 248800 NR_030329 693184 NR_030329 ENSG00000207804 MIR599 MIRN599|hsa-mir-599 microRNA 599 ncRNA 157.538-10 chr4 122343454 122343798 + 0.615385 NA intron (NM_015312, intron 71 of 83) intron (NM_015312, intron 71 of 83) -35385 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding 179.538-10 chr9 76070687 76071208 + 0.615385 NA intron (NR_120409, intron 6 of 19) intron (NR_120409, intron 6 of 19) 180274 NR_120409 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding 154.384 chr1 205938539 205938988 + 0.615385 NA intron (NM_052934, intron 1 of 20) intron (NM_052934, intron 1 of 20) 3635 NR_110983 103021296 Hs.613648 NR_110983 SLC26A9-AS1 - SLC26A9 and RAB7B antisense RNA 1 ncRNA 207.231-9 chr8 81946884 81947534 + 0.615385 NA Intergenic Intergenic -104923 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 177.461 chr20 49156383 49156924 + 0.615385 NA intron (NM_001322927, intron 1 of 11) intron (NM_001322927, intron 1 of 11) 31717 NM_017453 6780 Hs.596704 NM_004602 ENSG00000124214 STAU1 PPP1R150|STAU staufen double-stranded RNA binding protein 1 protein-coding 204.923-8 chr8 126063217 126063860 + 0.615385 NA Intergenic MLT1J1|LTR|ERVL-MaLR -112341 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 169.385-4 chr22 40951240 40951659 + 0.615385 NA promoter-TSS (NM_014248) promoter-TSS (NM_014248) 71 NM_014248 9978 Hs.474949 NM_014248 ENSG00000100387 RBX1 BA554C12.1|RNF75|ROC1 ring-box 1 protein-coding 189.385-2 chr14 99264221 99264928 + 0.615385 NA intron (NM_022898, intron 1 of 2) intron (NM_022898, intron 1 of 2) 7623 NM_001282238 64919 Hs.709690 NM_022898 ENSG00000127152 BCL11B ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IDDFSTA|IMD49|RIT1|ZNF856B|hRIT1-alpha BAF chromatin remodeling complex subunit BCL11B protein-coding 169.769-6 chr3 157853082 157853384 + 0.615385 NA Intergenic Intergenic 252930 NM_001163678 6474 Hs.55967 NM_003030 ENSG00000168779 SHOX2 OG12|OG12X|SHOT short stature homeobox 2 protein-coding 179.154-4 chr2 195482481 195482957 + 0.615385 NA Intergenic Intergenic -174239 NM_001127257 57181 Hs.650158 NM_020342 ENSG00000196950 SLC39A10 LZT-Hs2 solute carrier family 39 member 10 protein-coding 180-3 chr2 153984964 153985346 + 0.615385 NA intron (NM_052917, intron 3 of 12) intron (NM_052917, intron 3 of 12) 40761 NM_001301627 114805 Hs.470277 NM_052917 ENSG00000144278 GALNT13 GalNAc-T13 polypeptide N-acetylgalactosaminyltransferase 13 protein-coding 211.231-3 chr6 82749510 82749958 + 0.615385 NA Intergenic Intergenic 316107 NR_146808 90025 Hs.148609 NM_198920 ENSG00000118420 UBE3D C6orf157|H10BH|UBE2CBP|YJR141W ubiquitin protein ligase E3D protein-coding 199.231-8 chr8 103935061 103935670 + 0.615385 NA intron (NR_145711, intron 9 of 21) L3|LINE|CR1 116145 NR_145711 9699 Hs.655271 NM_014677 ENSG00000176406 RIMS2 OBOE|RAB3IP3|RIM2 regulating synaptic membrane exocytosis 2 protein-coding 173.538-9 chr8 28910838 28911325 + 0.615385 NA intron (NM_024567, intron 2 of 10) intron (NM_024567, intron 2 of 10) 19767 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding 154.923-11 chr5 52559612 52559929 + 0.615385 NA Intergenic Intergenic -228146 NM_181501 3672 Hs.644352 NM_181501 ENSG00000213949 ITGA1 CD49a|VLA1 integrin subunit alpha 1 protein-coding 183.308-6 chr8 137974934 137975417 + 0.615385 NA intron (NR_161374, intron 2 of 7) intron (NR_161374, intron 2 of 7) 108370 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 182.154-4 chr18 31103439 31104016 + 0.615385 NA intron (NR_110785, intron 2 of 3) intron (NR_110785, intron 2 of 3) -1306 NM_004949 1824 Hs.95612 NM_004949 ENSG00000134755 DSC2 ARVD11|CDHF2|DG2|DGII/III|DSC3 desmocollin 2 protein-coding 161.461 chr1 88156514 88157061 + 0.615385 NA Intergenic Intergenic -527357 NM_001320707 5586 Hs.440833 NM_006256 ENSG00000065243 PKN2 PAK2|PRK2|PRKCL2|PRO2042|Pak-2|STK7 protein kinase N2 protein-coding 155.385-13 chr5 153630540 153630901 + 0.615385 NA intron (NM_001258020, intron 3 of 16) intron (NM_001258020, intron 3 of 16) 138548 NM_001258021 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding 328.769 chr5 66179881 66180732 + 0.615385 NA 3' UTR (NM_001270492, exon 13 of 13) 3' UTR (NM_001270492, exon 13 of 13) 29140 NR_146488 101928741 Hs.676049 NR_146488 LINC02065 - long intergenic non-protein coding RNA 2065 ncRNA 156.923-12 chr2 176515535 176515943 + 0.615385 NA Intergenic L1ME1|LINE|L1 85313 NR_031648 100302142 NR_031648 ENSG00000283203 MIR1246 MIRN1246|hsa-mir-1246 microRNA 1246 ncRNA 166.385-2 chr2 204623508 204623940 + 0.615385 NA intron (NM_205863, intron 1 of 21) L1MB1|LINE|L1 78249 NM_205863 117583 Hs.657382 NM_057177 ENSG00000116117 PARD3B ALS2CR19|PAR3B|PAR3L|PAR3beta par-3 family cell polarity regulator beta protein-coding 153.462 chr1 48687236 48687514 + 0.615385 NA intron (NM_001323575, intron 6 of 12) intron (NM_001323575, intron 6 of 12) 89516 NM_024603 79656 Hs.475348 NM_024603 ENSG00000162373 BEND5 C1orf165 BEN domain containing 5 protein-coding 157.846-17 chr7 32198268 32198605 + 0.615385 NA intron (NM_001322059, intron 2 of 17) MLT1J|LTR|ERVL-MaLR 100892 NM_001191058 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 208.154-3 chr5 7103866 7104345 + 0.615385 NA Intergenic Intergenic 165249 NR_039659 100616234 NR_039659 ENSG00000283468 MIR4454 - microRNA 4454 ncRNA 166.462-3 chr2 74412815 74413164 + 0.615385 NA Intergenic Intergenic 4728 NM_001145054 388963 Hs.445377 NM_001145054 ENSG00000284308 C2orf81 hCG40743 chromosome 2 open reading frame 81 protein-coding 186.461-2 chr8 117121731 117122325 + 0.615385 NA intron (NM_001172815, intron 2 of 10) intron (NM_001172815, intron 2 of 10) -12967 NM_173851 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 167.692-8 chr7 81783307 81783798 + 0.615385 NA Intergenic Intergenic -13505 NM_000601 3082 Hs.396530 NM_000601 ENSG00000019991 HGF DFNB39|F-TCF|HGFB|HPTA|SF hepatocyte growth factor protein-coding 158.615-12 chr9 77361996 77362545 + 0.615385 NA intron (NM_001018038, intron 59 of 68) L1MB4|LINE|L1 -85379 NR_121184 101927422 Hs.434324 NR_121184 ENSG00000231373 GNA14-AS1 - GNA14 antisense RNA 1 ncRNA 170.461 chr11 42871795 42872221 + 0.615385 NA Intergenic Intergenic 397361 NR_033868 399881 Hs.446761 NR_033868 ENSG00000251557 HNRNPKP3 - heterogeneous nuclear ribonucleoprotein K pseudogene 3 pseudo 205.846 chr13 68320367 68320850 + 0.615385 NA Intergenic L1PA17|LINE|L1 564717 NR_038878 338862 NR_038878 ENSG00000281778 LINC00550 - long intergenic non-protein coding RNA 550 ncRNA 181.077-2 chr6 19571768 19572098 + 0.615385 NA Intergenic MamGypsy2-I|LTR|Gypsy 122112 NR_134615 105374960 Hs.519913 NR_134615 LOC105374960 - uncharacterized LOC105374960 ncRNA 152.615 chr15 57960752 57961003 + 0.615385 NA intron (NM_170696, intron 10 of 11) intron (NM_170696, intron 10 of 11) 53146 NM_170697 8854 Hs.643455 NM_003888 ENSG00000128918 ALDH1A2 RALDH(II)|RALDH2|RALDH2-T aldehyde dehydrogenase 1 family member A2 protein-coding 165.616 chr17 58994381 58994731 + 0.615385 NA intron (NM_001005207, intron 24 of 24) AluJr|SINE|Alu 112324 NM_001320989 4591 Hs.579079 NM_015294 ENSG00000108395 TRIM37 MUL|POB1|TEF3 tripartite motif containing 37 protein-coding 189.385 chr10 22570666 22571059 + 0.615385 NA intron (NM_005028, intron 5 of 9) Charlie1a|DNA|hAT-Charlie -132933 NR_036533 100499489 Hs.7444 NR_036533 LOC100499489 - uncharacterized LOC100499489 ncRNA 244.692-2 chr9 28225491 28226421 + 0.615385 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) 493349 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 161.846-3 chr13 57810319 57810826 + 0.615385 NA Intergenic L1MA6|LINE|L1 178828 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding 153.846 chr1 89113144 89113588 + 0.615385 NA intron (NM_004120, intron 7 of 10) intron (NM_004120, intron 7 of 10) 12748 NM_004120 2634 Hs.386567 NM_004120 ENSG00000162645 GBP2 - guanylate binding protein 2 protein-coding 174.539 chr5 159676728 159677089 + 0.615385 NA Intergenic L1MA1|LINE|L1 194476 NR_109891 101927766 Hs.638568 NR_109891 ENSG00000253311 LINC01847 - long intergenic non-protein coding RNA 1847 ncRNA 179.154-3 chr16 74478087 74478627 + 0.615385 NA intron (NR_027264, intron 11 of 26) intron (NR_027264, intron 11 of 26) -56887 NM_001011880 497190 Hs.454670 NM_001011880 ENSG00000140839 CLEC18B MRCL2 C-type lectin domain family 18 member B protein-coding 159.077-5 chr16 76419788 76420179 + 0.615385 NA intron (NR_136213, intron 3 of 23) MLT1A|LTR|ERVL-MaLR 110131 NM_138994 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding 180.385-5 chr7 82111649 82112268 + 0.615385 NA intron (NM_000722, intron 6 of 38) intron (NM_000722, intron 6 of 38) 102781 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA 158.846-2 chr3 11624216 11624531 + 0.615385 NA intron (NM_014667, intron 2 of 5) intron (NM_014667, intron 2 of 5) 19542 NM_001128219 9686 Hs.740389 NM_014667 ENSG00000144560 VGLL4 VGL-4 vestigial like family member 4 protein-coding 198.923-5 chr6 148887052 148887913 + 0.615385 NA intron (NM_005715, intron 2 of 7) intron (NM_005715, intron 2 of 7) 77202 NR_038408 100128176 Hs.557541 NR_038408 UST-AS1 - UST antisense RNA 1 ncRNA 176.461-3 chr18 61279210 61279823 + 0.615385 NA Intergenic Intergenic -53914 NM_031891 28316 Hs.671510 NM_031891 ENSG00000101542 CDH20 CDH7L3|Cdh7 cadherin 20 protein-coding 220 chr4 118930120 118930687 + 0.615385 NA intron (NM_001128934, intron 1 of 4) L2b|LINE|L2 41549 NM_001128933 171024 Hs.655519 NM_133477 ENSG00000172403 SYNPO2 - synaptopodin 2 protein-coding 167-4 chr5 68785269 68785716 + 0.615385 NA Intergenic L1MA4|LINE|L1 244435 NR_130778 101928885 Hs.630474 NR_130778 LINC02198 - long intergenic non-protein coding RNA 2198 ncRNA 238.538 chr4 101364152 101364761 + 0.615385 NA Intergenic THE1C|LTR|ERVL-MaLR 16679 NR_033874 90024 Hs.534513 NR_033874 ENSG00000254531 FLJ20021 - uncharacterized LOC90024 ncRNA 201.308-3 chr16 82407028 82407510 + 0.615385 NA Intergenic Intergenic -219700 NM_001220492 1012 Hs.654386 NM_001257 ENSG00000140945 CDH13 CDHH|P105 cadherin 13 protein-coding 166.692-2 chr12 100712792 100713259 + 0.615385 NA Intergenic MLT2B1|LTR|ERVL -81751 NM_001286615 121601 Hs.58785 NM_178826 ENSG00000151572 ANO4 TMEM16D anoctamin 4 protein-coding 199.077 chr15 97502257 97502681 + 0.615385 NA intron (NR_120324, intron 2 of 4) intron (NR_120324, intron 2 of 4) 19342 NR_120324 101927286 Hs.611279 NR_120324 ENSG00000259664 LINC02254 - long intergenic non-protein coding RNA 2254 ncRNA 165.154-5 chr3 104408552 104408948 + 0.615385 NA Intergenic Intergenic -884634 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 179.077-7 chr2 186089070 186089533 + 0.615385 NA Intergenic Tigger3b|DNA|TcMar-Tigger -2984 NR_110218 101927217 Hs.130011 NR_110218 ENSG00000237877 LINC01473 - long intergenic non-protein coding RNA 1473 ncRNA 154.462-2 chr5 126939190 126939640 + 0.615385 NA intron (NM_178450, intron 1 of 4) intron (NM_178450, intron 1 of 4) 91143 NM_178450 115123 Hs.132441 NM_178450 ENSG00000173926 MARCH3 MARCH-III|RNF173 membrane associated ring-CH-type finger 3 protein-coding 203.077-8 chr8 49723102 49723543 + 0.615385 NA Intergenic Intergenic -186474 NM_001287813 54212 Hs.584914 NM_018967 ENSG00000147481 SNTG1 G1SYN|SYN4 syntrophin gamma 1 protein-coding 203.615-2 chr7 37939475 37940042 + 0.615385 NA intron (NM_001242948, intron 1 of 2) L1MC5a|LINE|L1 18439 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding 207.077-2 chr16 59901127 59901741 + 0.615385 NA intron (NR_110917, intron 1 of 3) L1ME4a|LINE|L1 46081 NR_110917 101927580 Hs.552235 NR_110917 ENSG00000261807 LINC02141 - long intergenic non-protein coding RNA 2141 ncRNA 178.846-4 chr22 25713758 25714307 + 0.615385 NA intron (NM_001362778, intron 16 of 19) intron (NM_001362778, intron 16 of 19) -28156 NM_032608 84700 Hs.417959 NM_032608 ENSG00000133454 MYO18B KFS4 myosin XVIIIB protein-coding 173.154-5 chr20 59920982 59921581 + 0.615385 NA intron (NM_014258, intron 4 of 44) intron (NM_014258, intron 4 of 44) 12356 NM_014258 10388 Hs.202676 NM_014258 ENSG00000196074 SYCP2 SCP-2|SCP2 synaptonemal complex protein 2 protein-coding 194.461 chr10 41883138 41883562 + 0.615385 NA Intergenic (ATGGA)n|Simple_repeat|Simple_repeat 484695 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 182.616 chr11 121841866 121842362 + 0.615385 NA Intergenic Intergenic 257730 NR_029671 406911 NR_029671 ENSG00000207971 MIR125B1 MIRN125B1|mir-125b-1 microRNA 125b-1 ncRNA 205.846-4 chr5 164891633 164892018 + 0.615385 NA Intergenic Intergenic 421546 NR_105065 102546299 Hs.437730 NR_105065 ENSG00000241956 LOC102546299 - uncharacterized LOC102546299 ncRNA 158.692-6 chr6 56203098 56203473 + 0.615385 NA intron (NM_001318752, intron 1 of 28) intron (NM_001318752, intron 1 of 28) 44295 NM_030820 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 226.769-4 chr2 194596113 194596652 + 0.615385 NA Intergenic MLT1B-int|LTR|ERVL-MaLR -134213 NR_110223 101927431 Hs.558215 NR_110223 ENSG00000230173 LINC01790 - long intergenic non-protein coding RNA 1790 ncRNA 192.154-2 chr7 107679285 107679696 + 0.615385 NA intron (NM_000441, intron 6 of 20) intron (NM_000441, intron 6 of 20) -17692 NR_028137 286002 Hs.512611 NR_028137 SLC26A4-AS1 - SLC26A4 antisense RNA 1 ncRNA 173.539-2 chr5 20647377 20647680 + 0.615385 NA intron (NR_149120, intron 1 of 11) L1PA8A|LINE|L1 -31993 NR_147185 105374677 NR_147185 LINC02146 - long intergenic non-protein coding RNA 2146 ncRNA 169.846-9 chr9 27999370 27999831 + 0.615385 NA intron (NM_001354574, intron 5 of 5) intron (NM_001354574, intron 5 of 5) -425734 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 201.615-2 chr5 98949234 98949743 + 0.615385 NA intron (NR_151718, intron 1 of 3) ERV3-16A3_LTR|LTR|ERVL -19774 NR_157078 1105 Hs.643465 NM_001270 ENSG00000153922 CHD1 CHD-1|PILBOS chromodomain helicase DNA binding protein 1 protein-coding 159.154-5 chr6 71176371 71176703 + 0.615385 NA Intergenic Intergenic -112274 NM_001324266 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding 166-2 chr11 83456436 83456794 + 0.615385 NA 3' UTR (NM_001142700, exon 20 of 20) 3' UTR (NM_001142700, exon 20 of 20) -170208 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 204.308-4 chr8 120517025 120517611 + 0.615385 NA intron (NM_022045, intron 18 of 21) intron (NM_022045, intron 18 of 21) 71899 NM_022045 27085 Hs.657656 NM_022045 ENSG00000172167 MTBP MDM2BP MDM2 binding protein protein-coding 188.308-2 chr2 69764793 69765219 + 0.615385 NA intron (NM_001365496, intron 2 of 13) L1MB3|LINE|L1 22872 NM_001365496 307 Hs.422986 NM_001153 ENSG00000196975 ANXA4 ANX4|HEL-S-274|P32.5|PAP-II|PIG28|PP4-X|ZAP36 annexin A4 protein-coding 162.308-3 chr3 33830785 33831048 + 0.615385 NA intron (NM_001162429, intron 7 of 17) LTR37-int|LTR|ERV1 32286 NM_013374 10015 Hs.475896 NM_013374 ENSG00000170248 PDCD6IP AIP1|ALIX|DRIP4|HP95 programmed cell death 6 interacting protein protein-coding 181.846-10 chr7 140654017 140654403 + 0.615385 NA Intergenic Helitron3Na_Mam|RC|Helitron -12750 NM_001318053 27147 Hs.6385 NM_015689 ENSG00000146966 DENND2A FAM31D|KIAA1277 DENN domain containing 2A protein-coding 186.077-2 chr8 66089412 66090168 + 0.615385 NA intron (NM_001349432, intron 5 of 5) intron (NM_001349432, intron 5 of 5) -37339 NM_184085 84675 Hs.85524 NM_033058 ENSG00000147573 TRIM55 MURF-2|RNF29|muRF2 tripartite motif containing 55 protein-coding 178.769-8 chr5 97286048 97286508 + 0.615385 NA Intergenic L1PA14|LINE|L1 -103031 NM_001159749 55781 Hs.27021 NM_018343 ENSG00000058729 RIOK2 RIO2 RIO kinase 2 protein-coding 182.923-4 chr6 71293744 71294197 + 0.615385 NA intron (NM_001324266, intron 3 of 6) MIRc|SINE|MIR 5159 NM_024576 79627 Hs.648434 NM_024576 ENSG00000119900 OGFRL1 dJ331H24.1 opioid growth factor receptor like 1 protein-coding 158.539-2 chr9 83009051 83009332 + 0.615385 NA intron (NM_152573, intron 6 of 16) (AT)n|Simple_repeat|Simple_repeat 53951 NM_152573 158158 Hs.129136 NM_152573 ENSG00000165105 RASEF RAB45 RAS and EF-hand domain containing protein-coding 216.077-2 chr7 54976792 54977267 + 0.615385 NA Intergenic L1PB4|LINE|L1 -41988 NM_001346897 1956 Hs.488293 NM_005228 ENSG00000146648 EGFR ERBB|ERBB1|HER1|NISBD2|PIG61|mENA epidermal growth factor receptor protein-coding 181.692-3 chr15 20651839 20652212 + 0.615385 NA Intergenic Intergenic 89676 NR_027411 729786 Hs.592025 NR_027411 ENSG00000181984 GOLGA8CP GOLGA8C golgin A8 family member C, pseudogene pseudo 156.462 chr1 180627684 180628151 + 0.615385 NA Intergenic Intergenic -4105 NM_001135669 9213 Hs.227656 NM_004736 ENSG00000143324 XPR1 IBGC6|SLC53A1|SYG1|X3 xenotropic and polytropic retrovirus receptor 1 protein-coding 157.077-13 chr9 91106756 91107107 + 0.615385 NA Intergenic Intergenic -12131 NR_135306 100129347 Hs.522287 NR_135306 ENSG00000229694 LINC00484 C9orf73 long intergenic non-protein coding RNA 484 ncRNA 167.769-5 chr3 145273583 145274096 + 0.615385 NA Intergenic Intergenic 795346 NR_146297 109729161 NR_146297 ENSG00000240032 LNCSRLR lncRNA-SRLR lncRNA sorafenib resistance in renal cell carcinoma associated ncRNA 159.231-8 chr4 14676193 14676573 + 0.615385 NA intron (NR_126435, intron 3 of 6) intron (NR_126435, intron 3 of 6) 211786 NR_126435 201853 Hs.551051 NR_126435 ENSG00000248360 LINC00504 - long intergenic non-protein coding RNA 504 ncRNA 190.231-3 chr5 46115436 46116146 + 0.615385 NA Intergenic L1MC1|LINE|L1 -419411 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 152.923-13 chr6 53831612 53831881 + 0.615385 NA intron (NM_018214, intron 1 of 13) intron (NM_018214, intron 1 of 13) 36741 NM_018214 55227 Hs.606493 NM_018214 ENSG00000137269 LRRC1 LANO|dJ523E19.1 leucine rich repeat containing 1 protein-coding 179.077-9 chr3 71211878 71212280 + 0.615385 NA intron (NR_146142, intron 5 of 19) MER113|DNA|hAT-Charlie 32998 NM_001244814 27086 Hs.59368 NM_032682 ENSG00000114861 FOXP1 12CC4|HSPC215|MFH|QRF1|hFKH1B forkhead box P1 protein-coding 180.461 chr2 12964270 12964744 + 0.615385 NA Intergenic MIR3|SINE|MIR 42506 NR_038434 100506474 Hs.242196 NR_038434 ENSG00000225649 LOC100506474 - uncharacterized LOC100506474 ncRNA 176.308 chr12 38724255 38724899 + 0.615385 NA intron (NM_153634, intron 12 of 19) intron (NM_153634, intron 12 of 19) 181014 NM_153634 144402 Hs.40910 NM_153634 ENSG00000139117 CPNE8 - copine 8 protein-coding 201.846-6 chr19 37242745 37243343 + 0.615385 NA exon (NM_001345947, exon 5 of 5) exon (NM_001345947, exon 5 of 5) -8841 NR_110719 101927667 Hs.633102 NR_110718 ENSG00000226686 LINC01535 - long intergenic non-protein coding RNA 1535 ncRNA 198 chr1 23108865 23109483 + 0.615385 NA intron (NM_001142546, intron 1 of 3) intron (NM_001142546, intron 1 of 3) 59682 NM_033631 7798 Hs.257900 NM_033631 ENSG00000169641 LUZP1 LUZP leucine zipper protein 1 protein-coding 153.462-4 chr4 83834690 83834939 + 0.615385 NA Intergenic MLT1K|LTR|ERVL-MaLR 298706 NM_032717 84803 Hs.99196 NM_032717 ENSG00000138678 GPAT3 AGPAT 10|AGPAT10|AGPAT8|AGPAT9|HMFN0839|LPAAT-theta|MAG1 glycerol-3-phosphate acyltransferase 3 protein-coding 178.923-5 chr14 88300539 88301160 + 0.615385 NA intron (NM_021161, intron 1 of 6) intron (NM_021161, intron 1 of 6) 22420 NM_138317 54207 Hs.560255 NM_021161 ENSG00000100433 KCNK10 K2p10.1|PPP1R97|TREK-2|TREK2 potassium two pore domain channel subfamily K member 10 protein-coding 178.385-4 chr15 70427953 70428441 + 0.615385 NA Intergenic MLT1D|LTR|ERVL-MaLR 77731 NR_146562 105370880 NR_146562 ENSG00000259473 LINC02205 - long intergenic non-protein coding RNA 2205 ncRNA 164.616 chr5 114213996 114214749 + 0.615385 NA Intergenic Intergenic -147698 NM_021614 3781 Hs.98280 NM_021614 ENSG00000080709 KCNN2 KCa2.2|SK2|SKCA2|SKCa 2|hSK2 potassium calcium-activated channel subfamily N member 2 protein-coding 176.692-4 chr22 43734655 43735077 + 0.615385 NA intron (NM_198856, intron 5 of 29) intron (NM_198856, intron 5 of 29) 77439 NM_022785 64800 Hs.658996 NM_022785 ENSG00000186976 EFCAB6 DJBP|HSCBCIP1|dJ185D5.1 EF-hand calcium binding domain 6 protein-coding 184.846-6 chr17 29871867 29872250 + 0.615385 NA intron (NM_001282129, intron 1 of 15) intron (NM_001282129, intron 1 of 15) -57845 NM_001145053 374786 Hs.662411 NM_198529 ENSG00000176927 EFCAB5 - EF-hand calcium binding domain 5 protein-coding 155.539 chr12 63372983 63373303 + 0.615385 NA Intergenic L1ME2|LINE|L1 -220333 NM_000706 552 Hs.2131 NM_000706 ENSG00000166148 AVPR1A AVPR V1a|AVPR1|V1aR arginine vasopressin receptor 1A protein-coding 203.616 chr7 135408289 135409108 + 0.615385 NA intron (NM_013316, intron 7 of 10) MER6|DNA|TcMar-Tigger 101404 NM_013316 4850 Hs.490224 NM_013316 ENSG00000080802 CNOT4 CLONE243|NOT4|NOT4H CCR4-NOT transcription complex subunit 4 protein-coding 174.923-8 chr4 48936926 48937363 + 0.615385 NA Intergenic Intergenic -30316 NR_104589 132299 Hs.95835 NM_152398 ENSG00000145247 OCIAD2 - OCIA domain containing 2 protein-coding 161.231-7 chr4 41597043 41597457 + 0.615385 NA intron (NM_001330786, intron 1 of 22) MIR|SINE|MIR -15459 NM_001330982 22998 Hs.335163 NM_014988 ENSG00000064042 LIMCH1 LIMCH1A|LMO7B LIM and calponin homology domains 1 protein-coding 154.077-2 chr2 140904693 140905156 + 0.615385 NA intron (NM_018557, intron 22 of 90) intron (NM_018557, intron 22 of 90) -318239 NR_106979 102465692 NR_106979 ENSG00000283506 MIR7157 hsa-mir-7157 microRNA 7157 ncRNA 157.538-2 chr13 57501541 57502001 + 0.615385 NA Intergenic HAL1b|LINE|L1 -129973 NM_001040429 27253 Hs.106511 NM_014459 ENSG00000118946 PCDH17 PCDH68|PCH68 protocadherin 17 protein-coding 154.539 chr6 92718963 92719239 + 0.615385 NA Intergenic Intergenic 700458 NM_001288629 2045 Hs.73962 NM_004440 ENSG00000135333 EPHA7 EHK-3|EHK3|EK11|HEK11 EPH receptor A7 protein-coding 185.231-5 chr22 36342428 36342827 + 0.615385 NA intron (NM_002473, intron 2 of 40) intron (NM_002473, intron 2 of 40) 45440 NM_002473 4627 Hs.474751 NM_002473 ENSG00000100345 MYH9 BDPLT6|DFNA17|EPSTS|FTNS|MATINS|MHA|NMHC-II-A|NMMHC-IIA|NMMHCA myosin heavy chain 9 protein-coding 161.231-10 chr5 72174112 72174525 + 0.615385 NA intron (NM_005909, intron 2 of 6) MIRc|SINE|MIR 4851 NR_039967 100616377 NR_039967 ENSG00000264099 MIR4803 - microRNA 4803 ncRNA 164.769 chr11 16050827 16051323 + 0.615385 NA intron (NM_033326, intron 10 of 15) CR1-L3A_Croc|LINE|CR1 -81454 NR_106721 102464826 NR_106721 ENSG00000284094 MIR6073 hsa-mir-6073 microRNA 6073 ncRNA 175.769-5 chr20 37212861 37213184 + 0.615385 NA intron (NM_001135771, intron 7 of 16) intron (NM_001135771, intron 7 of 16) -33474 NM_213632 140699 Hs.349125 NM_152503 ENSG00000101353 MROH8 C20orf131|C20orf132 maestro heat like repeat family member 8 protein-coding 200.923-2 chr5 120453035 120453488 + 0.615385 NA Intergenic Intergenic -11017 NM_016644 51334 Hs.157461 NM_016644 ENSG00000184838 PRR16 DSC54|LARGEN proline rich 16 protein-coding 156.154-10 chr5 105280236 105280593 + 0.615385 NA Intergenic Intergenic 180940 NR_000039 9366 Hs.158296 NR_000039 ENSG00000232159 RAB9BP1 RAB9P1 RAB9B, member RAS oncogene family pseudogene 1 pseudo 170.538-7 chr6 56514893 56515408 + 0.615385 NA intron (NM_001144770, intron 64 of 94) intron (NM_001144770, intron 64 of 94) -121022 NM_001318752 81578 Hs.47629 NM_030820 ENSG00000124749 COL21A1 COLA1L|FP633 collagen type XXI alpha 1 chain protein-coding 161.539-5 chr4 12287354 12287766 + 0.615385 NA Intergenic ALR/Alpha|Satellite|centr 64109 NR_125910 101929019 Hs.434234 NR_125910 ENSG00000251210 LINC02270 - long intergenic non-protein coding RNA 2270 ncRNA 206.077 chr1 10209326 10209790 + 0.615385 NA Intergenic Intergenic -1012 NM_183416 23095 Hs.97858 NM_015074 ENSG00000054523 KIF1B CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 kinesin family member 1B protein-coding 157-7 chr4 110926487 110926971 + 0.615385 NA Intergenic Intergenic -66082 NR_030643 100126354 NR_030643 ENSG00000215961 MIR297 MIRN297|hsa-mir-297 microRNA 297 ncRNA 161.539-3 chr2 21837834 21838108 + 0.615385 NA Intergenic Intergenic -127319 NR_038837 645949 Hs.456782 NR_038837 ENSG00000229621 LINC01822 - long intergenic non-protein coding RNA 1822 ncRNA 184.769 chr10 30269037 30269391 + 0.615385 NA Intergenic (TATGTTA)n|Simple_repeat|Simple_repeat 57362 NR_120653 101929279 Hs.559153 NR_120653 LOC101929279 - uncharacterized LOC101929279 ncRNA 158.462-4 chr16 63870174 63870468 + 0.615385 NA Intergenic Intergenic 1251742 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding 155.923 chr14 55503371 55503822 + 0.615385 NA Intergenic MIRc|SINE|MIR -63051 NM_199047 387332 Hs.528278 NM_199047 ENSG00000182521 TBPL2 TBP2|TRF3 TATA-box binding protein like 2 protein-coding 175.154-3 chr10 105171796 105172329 + 0.615385 NA intron (NM_014978, intron 13 of 26) L3|LINE|CR1 -505846 NR_104028 100505890 Hs.348526 NR_104028 ENSG00000226387 SORCS3-AS1 - SORCS3 antisense RNA 1 ncRNA 183.384-2 chr6 101678881 101679327 + 0.615385 NA intron (NM_001166247, intron 4 of 16) L4_A_Mam|LINE|RTE-X 280119 NM_001166247 2898 Hs.98262 NM_021956 ENSG00000164418 GRIK2 EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6 glutamate ionotropic receptor kainate type subunit 2 protein-coding 159.462-4 chr6 80958937 80959287 + 0.615385 NA Intergenic Intergenic 793569 NM_017633 55603 Hs.10784 NM_017633 ENSG00000112773 TENT5A C6orf37|FAM46A|OI18|XTP11 terminal nucleotidyltransferase 5A protein-coding 152-10 chr5 59346161 59346572 + 0.615385 NA intron (NM_001165899, intron 3 of 16) intron (NM_001165899, intron 3 of 16) 10604 NM_001197219 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 158.308-15 chr7 74247470 74247907 + 0.615385 NA intron (NM_001278792, intron 3 of 9) Looper|DNA|PiggyBac 6711 NM_181471 5982 Hs.647062 NM_002914 ENSG00000049541 RFC2 RFC40 replication factor C subunit 2 protein-coding 192.769-6 chr9 76095088 76095610 + 0.615385 NA intron (NR_120409, intron 7 of 19) MIR|SINE|MIR 204676 NR_120409 5125 Hs.368542 NM_006200 ENSG00000099139 PCSK5 PC5|PC6|PC6A|SPC6 proprotein convertase subtilisin/kexin type 5 protein-coding 153.538-2 chr2 82777030 82777423 + 0.615385 NA Intergenic L1M2|LINE|L1 -79577 NR_033423 1720 Hs.169235 NR_033423 DHFRP3 - dihydrofolate reductase pseudogene 3 pseudo 166.308-8 chr7 54520949 54521547 + 0.615385 NA Intergenic L1PB1|LINE|L1 -21077 NM_182546 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding 167.923-2 chr18 21956936 21957316 + 0.615385 NA Intergenic Intergenic -125720 NR_110369 102723167 Hs.658808 NR_110369 ENSG00000265142 MIR133A1HG MIR1-2HG MIR133A1 host gene ncRNA 160.923-6 chr7 31676572 31677098 + 0.615385 NA Intergenic L1M5|LINE|L1 -10182 NM_001145123 10842 Hs.227011 NM_006658 ENSG00000106341 PPP1R17 C7orf16|GSBS protein phosphatase 1 regulatory subunit 17 protein-coding 210.461 chr5 107230189 107230672 + 0.615385 NA Intergenic Intergenic -219416 NR_104671 102467213 Hs.570923 NR_104671 ENSG00000251027 LINC01950 - long intergenic non-protein coding RNA 1950 ncRNA 181-2 chr7 107190912 107191372 + 0.615385 NA intron (NM_001244262, intron 8 of 10) intron (NM_001244262, intron 8 of 10) 22139 NM_012257 26959 Hs.162032 NM_012257 ENSG00000105856 HBP1 - HMG-box transcription factor 1 protein-coding 157.846-19 chr8 130370552 130371044 + 0.615385 NA intron (NM_001247996, intron 2 of 30) L1MB7|LINE|L1 72862 NM_001362924 50807 Hs.655552 NM_018482 ENSG00000153317 ASAP1 AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 protein-coding 167.692-10 chr9 28279287 28279584 + 0.615385 NA intron (NM_152570, intron 5 of 6) Tigger1|DNA|TcMar-Tigger 439870 NM_152570 158038 Hs.444665 NM_152570 ENSG00000174482 LINGO2 LERN3|LRRN6C leucine rich repeat and Ig domain containing 2 protein-coding 184.846-10 chr6 128893544 128894043 + 0.615385 NA intron (NM_000426, intron 1 of 64) Charlie1|DNA|hAT-Charlie 10652 NM_000426 3908 Hs.200841 NM_000426 ENSG00000196569 LAMA2 LAMM|MDC1A laminin subunit alpha 2 protein-coding 186.692-3 chr3 88273716 88274275 + 0.615385 NA Intergenic L1ME3A|LINE|L1 -64461 NM_001368166 111064647 NM_001368165 CSNKA2IP - casein kinase 2 subunit alpha' interacting protein protein-coding 154.154-9 chr18 67078766 67079110 + 0.615385 NA Intergenic Intergenic -2646 NR_049809 100847002 NR_049809 ENSG00000263354 MIR5011 - microRNA 5011 ncRNA 172.615-10 chr5 60549524 60550034 + 0.615385 NA Intergenic L1MA4A|LINE|L1 -53493 NM_001364599 5144 Hs.117545 NM_006203 ENSG00000113448 PDE4D ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1 phosphodiesterase 4D protein-coding 163.769-2 chr1 163928773 163929261 + 0.615385 NA Intergenic Intergenic -505826 NR_104294 100422212 Hs.556898 NR_104294 LOC100422212 - eukaryotic translation initiation factor 3 subunit J pseudogene pseudo 196 chr10 53108927 53109562 + 0.615385 NA Intergenic Intergenic -337544 NM_000242 4153 Hs.499674 NM_000242 ENSG00000165471 MBL2 COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD mannose binding lectin 2 protein-coding 154.615-5 chr13 92201204 92202083 + 0.615385 NA intron (NM_004466, intron 7 of 7) Kanga1c|DNA|TcMar-Tc2 150564 NR_120382 100873970 Hs.567269 NR_120382 GPC5-AS2 - GPC5 antisense RNA 2 ncRNA 160.538 chr2 76515533 76515979 + 0.615385 NA Intergenic Intergenic -470209 NR_110284 101927907 Hs.382185 NR_110284 ENSG00000234653 LOC101927907 - uncharacterized LOC101927907 ncRNA 162.615-2 chr10 109340757 109341155 + 0.615385 NA Intergenic L2c|LINE|L2 582290 NM_001324136 7511 Hs.390623 NM_020383 ENSG00000108039 XPNPEP1 APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1 X-prolyl aminopeptidase 1 protein-coding 170.846 chr11 23641554 23642137 + 0.615385 NA Intergenic L1MA1|LINE|L1 -222655 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA 153.231-17 chr6 164016843 164017359 + 0.615385 NA Intergenic L2a|LINE|L2 -345617 NR_134620 102724152 Hs.738183 NR_134620 LOC102724152 - uncharacterized LOC102724152 ncRNA 182.462-2 chr2 103277178 103277553 + 0.615385 NA Intergenic L1ME1|LINE|L1 -292936 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 167.385-9 chr8 133966855 133967207 + 0.615385 NA Intergenic Intergenic 80535 NR_125424 101927822 Hs.129114 NR_125424 ENSG00000253593 LOC101927822 - uncharacterized LOC101927822 ncRNA 202.154-5 chr13 54226350 54226932 + 0.615385 NA Intergenic L1ME2|LINE|L1 85407 NR_031628 100302187 NR_031628 ENSG00000283126 MIR1297 MIRN1297|hsa-mir-1297|mir-1297 microRNA 1297 ncRNA 159.077-4 chr14 68355490 68355877 + 0.615385 NA intron (NM_133509, intron 8 of 10) HAL1b|LINE|L1 273104 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 155.231-3 chr19 44021073 44021462 + 0.615385 NA Intergenic L1PA16|LINE|L1 -4075 NM_013360 7673 Hs.279840 NM_013360 ENSG00000159885 ZNF222 - zinc finger protein 222 protein-coding 191.154-2 chr12 46682430 46683076 + 0.615385 NA Intergenic Intergenic 143244 NM_001143824 55089 Hs.446077 NM_018018 ENSG00000139209 SLC38A4 ATA3|NAT3|PAAT|SNAT4 solute carrier family 38 member 4 protein-coding 235.615 chr1 84909531 84910211 + 0.615385 NA Intergenic L1MEd|LINE|L1 -16665 NM_012152 23566 Hs.527909 NM_012152 ENSG00000171517 LPAR3 EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3 lysophosphatidic acid receptor 3 protein-coding 208.308-2 chr2 58632019 58632481 + 0.615385 NA intron (NR_033873, intron 1 of 13) intron (NR_033873, intron 1 of 13) 111497 NR_033873 400955 Hs.503210 NR_033873 ENSG00000233723 LINC01122 - long intergenic non-protein coding RNA 1122 ncRNA 167.385-3 chr15 65708804 65709244 + 0.615385 NA intron (NM_005848, intron 14 of 31) intron (NM_005848, intron 14 of 31) 10308 NR_039736 100616379 NR_039736 ENSG00000264737 MIR4511 mir-4511 microRNA 4511 ncRNA 157.231-9 chr7 22642847 22643193 + 0.615385 NA Intergenic L1MA9|LINE|L1 22513 NR_122075 401312 Hs.583393 NR_122075 ENSG00000105889 LOC401312 - uncharacterized LOC401312 ncRNA 206.154-2 chr6 119777198 119777601 + 0.615385 NA intron (NR_134600, intron 2 of 3) L1MEg2|LINE|L1 227591 NR_134600 105377975 Hs.671597 NR_134600 LOC105377975 - uncharacterized LOC105377975 ncRNA 165.308-3 chr11 117345024 117345476 + 0.615385 NA intron (NM_001271933, intron 3 of 31) intron (NM_001271933, intron 3 of 31) 17396 NM_014956 22897 Hs.504009 NM_014956 ENSG00000110274 CEP164 NPHP15 centrosomal protein 164 protein-coding 168.385-5 chr5 15730474 15730837 + 0.615385 NA intron (NM_001278317, intron 2 of 3) intron (NM_001278317, intron 2 of 3) -115653 NR_109945 101929472 Hs.662664 NR_109945 CTD-2350J17.1 - uncharacterized LOC101929472 ncRNA 170.692-5 chr6 47225562 47225919 + 0.615385 NA Intergenic Intergenic 84165 NM_014452 27242 Hs.443577 NM_014452 ENSG00000146072 TNFRSF21 BM-018|CD358|DR6 TNF receptor superfamily member 21 protein-coding 163.231-6 chr5 145324074 145324520 + 0.615385 NA Intergenic Intergenic 511045 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding 153.154 chr1 99631877 99632250 + 0.615385 NA intron (NR_031666, intron 1 of 4) intron (NR_031666, intron 1 of 4) -14050 NM_017734 54873 Hs.483993 NM_017734 ENSG00000099260 PALMD C1orf11|PALML palmdelphin protein-coding 191.385-5 chr3 33509482 33509915 + 0.615385 NA intron (NM_001365634, intron 34 of 35) L1M5|LINE|L1 -69293 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding 201.154-3 chr2 168983493 168983867 + 0.615385 NA intron (NM_003742, intron 10 of 27) intron (NM_003742, intron 10 of 27) 47644 NM_003742 8647 Hs.158316 NM_003742 ENSG00000073734 ABCB11 ABC16|BRIC2|BSEP|PFIC-2|PFIC2|PGY4|SPGP ATP binding cassette subfamily B member 11 protein-coding 153.462-3 chr4 31844596 31844865 + 0.615385 NA Intergenic Intergenic -152649 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 183 chr12 40749292 40750018 + 0.615385 NA intron (NM_001256063, intron 1 of 15) MIRc|SINE|MIR 57213 NM_001256063 1272 Hs.143434 NM_001843 ENSG00000018236 CNTN1 F3|GP135|MYPCN contactin 1 protein-coding 155.231-9 chr6 3938074 3938532 + 0.615385 NA Intergenic Intergenic -82997 NM_003913 8899 Hs.159014 NM_003913 ENSG00000112739 PRPF4B PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1 pre-mRNA processing factor 4B protein-coding 169.692-9 chr4 42859436 42859969 + 0.615385 NA Intergenic L1ME1|LINE|L1 -33564 NM_001080476 389207 Hs.162559 NM_001080476 ENSG00000215203 GRXCR1 DFNB25|PPP1R88 glutaredoxin and cysteine rich domain containing 1 protein-coding 218.615 chr14 26469541 26469963 + 0.615385 NA TTS (NM_006491) TTS (NM_006491) 83678 NM_001366398 4857 Hs.31588 NM_002515 ENSG00000139910 NOVA1 Nova-1 NOVA alternative splicing regulator 1 protein-coding 166.462-5 chr7 65386315 65386665 + 0.615385 NA intron (NM_001287534, intron 1 of 1) intron (NM_001287534, intron 1 of 1) 12635 NM_007139 168374 Hs.9521 NM_007139 ENSG00000146757 ZNF92 HEL-203|HPF12|HTF12|TF12 zinc finger protein 92 protein-coding 156-2 chr10 32011633 32011972 + 0.615385 NA intron (NM_004521, intron 25 of 25) intron (NM_004521, intron 25 of 25) 44623 NM_004521 3799 Hs.327736 NM_004521 ENSG00000170759 KIF5B HEL-S-61|KINH|KNS|KNS1|UKHC kinesin family member 5B protein-coding 183.923-5 chr3 27682735 27683122 + 0.615385 NA Intergenic Intergenic 39395 NM_005442 8320 Hs.591663 NM_005442 ENSG00000163508 EOMES TBR2 eomesodermin protein-coding 193.538 chr1 79669846 79670642 + 0.615385 NA Intergenic Intergenic -663514 NM_022159 64123 Hs.132314 NM_022159 ENSG00000162618 ADGRL4 ELTD1|ETL|KPG_003 adhesion G protein-coupled receptor L4 protein-coding 166.615 chr12 9085573 9086155 + 0.615385 NA intron (NM_000014, intron 22 of 35) L1MA7|LINE|L1 20687 NR_137425 144571 Hs.592432 NR_026971 ENSG00000245105 A2M-AS1 - A2M antisense RNA 1 ncRNA 178.846-6 chr6 65592545 65593053 + 0.615385 NA intron (NM_001292009, intron 2 of 43) intron (NM_001292009, intron 2 of 43) -12995 NM_198283 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding 197.769-7 chr5 58224289 58224696 + 0.615385 NA Intergenic Intergenic -102151 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA 155.231-8 chr5 121594275 121594889 + 0.615385 NA Intergenic L2a|LINE|L2 -257300 NM_177478 94033 Hs.105324 NM_177478 ENSG00000181867 FTMT MTF ferritin mitochondrial protein-coding 178.769-3 chr13 51876205 51876742 + 0.615385 NA Intergenic Charlie25|DNA|hAT-Charlie 14504 NM_001346075 83446 Hs.120573 NM_031290 ENSG00000123171 CCDC70 - coiled-coil domain containing 70 protein-coding 207.692-4 chr14 63266378 63266837 + 0.615385 NA intron (NM_020663, intron 1 of 4) L1PA16|LINE|L1 52328 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding 218.231 chr10 23629255 23629842 + 0.615385 NA Intergenic L1ME3G|LINE|L1 -65179 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 194.154-8 chr7 50295093 50295673 + 0.615385 NA Intergenic Intergenic -8681 NM_001291839 10320 Hs.435949 NM_006060 ENSG00000185811 IKZF1 CVID13|Hs.54452|IK1|IKAROS|LYF1|LyF-1|PPP1R92|PRO0758|ZNFN1A1 IKAROS family zinc finger 1 protein-coding 175.231-5 chr6 61900383 61900799 + 0.615385 NA intron (NR_146874, intron 5 of 13) intron (NR_146874, intron 5 of 13) 326461 NM_001190706 100463487 NM_001190706 MTRNR2L9 HN9 MT-RNR2 like 9 protein-coding 191.692 chr10 74376354 74376940 + 0.615385 NA intron (NM_001369124, intron 4 of 9) L1MC5a|LINE|L1 152677 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA 176.231-5 chr7 38986890 38987207 + 0.615385 NA intron (NR_138047, intron 4 of 6) intron (NR_138047, intron 4 of 6) 9139 NM_007252 11281 Hs.137106 NM_007252 ENSG00000106536 POU6F2 RPF-1|WT5|WTSL POU class 6 homeobox 2 protein-coding 155.538-8 chr2 19660185 19660592 + 0.615385 NA Intergenic MSTB1|LTR|ERVL-MaLR -208466 NR_033875 400946 Hs.289062 NR_033875 ENSG00000228784 LINC00954 - long intergenic non-protein coding RNA 954 ncRNA 159.769-9 chr5 43487769 43488440 + 0.615385 NA intron (NM_198566, intron 11 of 12) intron (NM_198566, intron 11 of 12) -4239 NM_022483 64417 Hs.732093 NM_022483 ENSG00000151881 TMEM267 C5orf28 transmembrane protein 267 protein-coding 152.154-9 chr20 54687843 54688287 + 0.615385 NA Intergenic AluSq2|SINE|Alu 212472 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 176.461-2 chr15 68915592 68916050 + 0.615385 NA Intergenic L1MB5|LINE|L1 -14679 NR_033672 79400 Hs.657932 NM_024505 ENSG00000255346 NOX5 - NADPH oxidase 5 protein-coding 167.231-3 chr14 63366466 63366826 + 0.615385 NA Intergenic Tigger2a|DNA|TcMar-Tigger -47711 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding 164 chr14 68486032 68486455 + 0.615385 NA intron (NM_001321818, intron 10 of 10) intron (NM_001321818, intron 10 of 10) 142544 NR_135816 100996664 NR_135816 LOC100996664 - uncharacterized LOC100996664 ncRNA 166.308-2 chr16 10486814 10487242 + 0.615385 NA Intergenic HERVIP10F-int|LTR|ERV1 41170 NR_149081 106144584 Hs.531561 NR_149081 ENSG00000260468 LINC01290 - long intergenic non-protein coding RNA 1290 ncRNA 276.923 chr13 107961776 107962519 + 0.615385 NA Intergenic Intergenic -94651 NM_001080396 728215 Hs.535394 NM_001080396 ENSG00000204442 FAM155A - family with sequence similarity 155 member A protein-coding 153.231-3 chr11 23739270 23739766 + 0.615385 NA Intergenic Intergenic -320328 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA 230.462 chr5 130813074 130813803 + 0.615385 NA Intergenic Intergenic 351818 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding 154.615-7 chr16 62608332 62608729 + 0.615385 NA Intergenic Intergenic -572092 NM_001796 1006 Hs.368322 NM_001796 ENSG00000150394 CDH8 Nbla04261 cadherin 8 protein-coding 200.154 chr11 91371505 91371970 + 0.615385 NA Intergenic Intergenic -502535 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 205.231-4 chr6 64743493 64744011 + 0.615385 NA intron (NM_001292009, intron 22 of 43) intron (NM_001292009, intron 22 of 43) -557666 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 167.308-2 chr14 77365620 77366328 + 0.615385 NA intron (NM_001346133, intron 1 of 5) L3|LINE|CR1 7935 NM_001346134 283578 Hs.26403 NM_213601 ENSG00000100580 TMED8 FAM15B transmembrane p24 trafficking protein family member 8 protein-coding 158.308-16 chr9 83634166 83634491 + 0.615385 NA intron (NM_001001551, intron 3 of 4) intron (NM_001001551, intron 3 of 4) 11185 NM_001001551 414328 Hs.530261 NM_001001551 ENSG00000148057 IDNK C9orf103|bA522I20.2|hGntK IDNK gluconokinase protein-coding 189.846-2 chr12 5081440 5081979 + 0.615385 NA Intergenic HAL1ME|LINE|L1 37830 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding 158.462-9 chr6 56680455 56680807 + 0.615385 NA intron (NM_001144770, intron 6 of 94) L2c|LINE|L2 -37742 NM_015548 667 Hs.604915 NM_001723 ENSG00000151914 DST BP240|BPA|BPAG1|CATX-15|CATX15|D6S1101|DMH|DT|EBSB2|HSAN6|MACF2 dystonin protein-coding 161.846-6 chr4 85947438 85947750 + 0.615385 NA intron (NM_031305, intron 2 of 6) intron (NM_031305, intron 2 of 6) 17578 NM_031305 83478 Hs.444229 NM_031305 ENSG00000138639 ARHGAP24 FILGAP|RC-GAP72|RCGAP72|p73|p73RhoGAP Rho GTPase activating protein 24 protein-coding 178.462-3 chr12 16206433 16207048 + 0.615385 NA intron (NM_001170798, intron 7 of 8) intron (NM_001170798, intron 7 of 8) 70945 NM_001170798 729025 Hs.692712 NM_001170798 ENSG00000188991 SLC15A5 - solute carrier family 15 member 5 protein-coding 155.385-4 chr13 53352419 53352760 + 0.615385 NA Intergenic MER5B|DNA|hAT-Charlie -200689 NR_125788 102723875 Hs.149083 NR_125788 LINC01065 - long intergenic non-protein coding RNA 1065 ncRNA 212.154 chr10 35653067 35653445 + 0.615385 NA Intergenic Intergenic -11822 NM_031866 8325 Hs.302634 NM_031866 ENSG00000177283 FZD8 FZ-8|hFZ8 frizzled class receptor 8 protein-coding 159.231-10 chr6 65475950 65476251 + 0.615385 NA intron (NM_198283, intron 4 of 9) intron (NM_198283, intron 4 of 9) 103704 NM_198283 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding 158.308-9 chr4 37277451 37277822 + 0.615385 NA intron (NM_001144990, intron 1 of 6) L1M4a2|LINE|L1 32893 NM_001144990 57495 Hs.4280 NM_001144990 ENSG00000174145 NWD2 KIAA1239 NACHT and WD repeat domain containing 2 protein-coding 193.154 chr5 57452643 57453134 + 0.615385 NA Intergenic Intergenic 29923 NM_001017992 345651 Hs.482167 NM_001017992 ENSG00000169067 ACTBL2 ACT actin beta like 2 protein-coding 166.077-4 chr3 48418800 48419069 + 0.615385 NA exon (NM_001130082, exon 13 of 38) exon (NM_001130082, exon 13 of 38) 10529 NM_002673 5364 Hs.476209 NM_002673 ENSG00000164050 PLXNB1 PLEXIN-B1|PLXN5|SEP plexin B1 protein-coding 166.154-2 chr14 64839243 64839558 + 0.615385 NA intron (NM_001355436, intron 1 of 35) L1ME1|LINE|L1 -16020 NM_001024858 6710 Hs.417303 NM_000347 ENSG00000070182 SPTB EL3|HS2|HSPTB1|SPH2 spectrin beta, erythrocytic protein-coding 229.231 chr11 111785803 111786254 + 0.615385 NA non-coding (NR_147984, exon 16 of 16) non-coding (NR_147984, exon 16 of 16) -19639 NM_181699 5519 Hs.269128 NM_002716 ENSG00000137713 PPP2R1B PP2A-Abeta|PR65B protein phosphatase 2 scaffold subunit Abeta protein-coding 170.769-9 chr21 20970200 20970571 + 0.615385 NA Intergenic Intergenic -28024 NM_001352591 4685 Hs.473450 NM_004540 ENSG00000154654 NCAM2 NCAM21 neural cell adhesion molecule 2 protein-coding 169-10 chr7 137984233 137984662 + 0.615385 NA intron (NM_001253775, intron 1 of 3) MLT1L|LTR|ERVL-MaLR 17639 NM_001253775 64764 Hs.490273 NM_194071 ENSG00000182158 CREB3L2 BBF2H7 cAMP responsive element binding protein 3 like 2 protein-coding 235.308 chr21 43291568 43291982 + 0.615385 NA Intergenic Intergenic 40264 NR_103713 100126693 Hs.473952 NR_103713 LINC00322 C21orf136|NCRNA00322 long intergenic non-protein coding RNA 322 ncRNA 168.308-7 chr6 74477814 74478135 + 0.615385 NA intron (NR_110856, intron 2 of 3) (GTG)n|Simple_repeat|Simple_repeat 408523 NR_110856 101928516 Hs.384600 NR_110856 ENSG00000223786 LOC101928516 - uncharacterized LOC101928516 ncRNA 175.384-4 chr7 54516588 54517140 + 0.615385 NA Intergenic L1M4|LINE|L1 -25461 NM_182546 222008 Hs.335933 NM_182546 ENSG00000170419 VSTM2A VSTM2 V-set and transmembrane domain containing 2A protein-coding 208.384 chr13 48981758 48982409 + 0.615385 NA intron (NR_103528, intron 1 of 25) intron (NR_103528, intron 1 of 25) 5421 NR_103528 22862 Hs.508010 NM_014923 ENSG00000102531 FNDC3A FNDC3|HUGO|bA203I16.1|bA203I16.5 fibronectin type III domain containing 3A protein-coding 230.692 chr10 23809447 23810215 + 0.615385 NA intron (NM_001098500, intron 1 of 18) intron (NM_001098500, intron 1 of 18) 115104 NM_001098500 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 201.615-3 chr9 87096575 87097114 + 0.615385 NA Intergenic Intergenic -11619 NR_036691 494127 Hs.626316 NR_036691 LOC494127 - NFYC pseudogene pseudo 156.769-7 chr19 56591752 56592239 + 0.615385 NA Intergenic L1MC|LINE|L1 -3301 NM_021216 58491 Hs.301431 NM_021216 ENSG00000197951 ZNF71 EZFIT zinc finger protein 71 protein-coding 179.231-5 chr2 206149334 206149626 + 0.615385 NA intron (NM_001199981, intron 3 of 17) intron (NM_001199981, intron 3 of 17) 9714 NM_001199984 4719 Hs.471207 NM_005006 ENSG00000023228 NDUFS1 CI-75Kd|CI-75k|MC1DN5|PRO1304 NADH:ubiquinone oxidoreductase core subunit S1 protein-coding 152.077-2 chr11 74112576 74112844 + 0.615385 NA intron (NM_001286577, intron 11 of 32) L1MB7|LINE|L1 58292 NM_015531 26005 Hs.557938 NM_015531 ENSG00000168014 C2CD3 OFD14 C2 domain containing 3 centriole elongation regulator protein-coding 170.769-11 chr3 89250534 89251096 + 0.615385 NA intron (NM_182644, intron 3 of 6) intron (NM_182644, intron 3 of 6) 143194 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 175.692-5 chr7 30013198 30013683 + 0.615385 NA non-coding (NR_046479, exon 3 of 3) non-coding (NR_046479, exon 3 of 3) 13262 NR_046478 55033 Hs.390838 NM_017946 ENSG00000106080 FKBP14 EDSKMH|EDSKSCL2|FKBP22|IPBP12 FKBP prolyl isomerase 14 protein-coding 156.769-8 chr3 27237703 27238261 + 0.615385 NA intron (NM_199347, intron 24 of 24) intron (NM_199347, intron 24 of 24) -21459 NM_001304384 152110 Hs.506115 NM_152534 ENSG00000163491 NEK10 - NIMA related kinase 10 protein-coding 160.385-3 chr15 38735251 38735729 + 0.615385 NA Intergenic Tigger3b|DNA|TcMar-Tigger 38892 NR_160786 153.769 chr12 111953622 111954096 + 0.615385 NA intron (NM_138341, intron 3 of 9) intron (NM_138341, intron 3 of 9) 54796 NR_036636 8759 Hs.661708 NR_036636 ADAM1A ADAM1|ADAM1P|FTNAP|Ftna|PH-30a ADAM metallopeptidase domain 1A (pseudogene) pseudo 158.616 chr12 41248544 41248953 + 0.615385 NA intron (NM_001164595, intron 3 of 9) intron (NM_001164595, intron 3 of 9) 60428 NM_001164595 29951 Hs.380044 NM_013377 ENSG00000165966 PDZRN4 LNX4|SAMCAP3L PDZ domain containing ring finger 4 protein-coding 196-10 chr8 109343439 109343785 + 0.615385 NA non-coding (NR_036471, exon 5 of 5) non-coding (NR_036471, exon 5 of 5) 9265 NR_036472 56943 Hs.492555 NM_020189 ENSG00000120533 ENY2 DC6|Sus1|e(y)2 ENY2 transcription and export complex 2 subunit protein-coding 206.461 chr3 175344613 175345241 + 0.615385 NA intron (NM_207015, intron 5 of 13) MIR|SINE|MIR -24613 NR_039952 100616395 NR_039952 ENSG00000264974 MIR4789 - microRNA 4789 ncRNA 156.615-11 chr8 93941252 93941728 + 0.615385 NA Intergenic MER52-int|LTR|ERV1 24543 NM_001161779 54704 Hs.22265 NM_018444 ENSG00000164951 PDP1 PDH|PDP|PDPC|PPM2A|PPM2C pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding 168.308-4 chr3 85835230 85835703 + 0.615385 NA intron (NM_001256502, intron 3 of 10) intron (NM_001256502, intron 3 of 10) -7416 NR_046752 100874037 Hs.570566 NR_046752 ENSG00000241648 CADM2-AS2 - CADM2 antisense RNA 2 ncRNA 168.769-8 chr3 164243367 164243785 + 0.615385 NA Intergenic L1PB1|LINE|L1 -72020 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA 164.923-8 chr5 36848386 36848713 + 0.615385 NA Intergenic L1PA6|LINE|L1 28145 NR_046262 646719 Hs.355684 NR_046262 ENSG00000285967 NIPBL-DT NIPBL-AS|NIPBL-AS1 NIPBL divergent transcript ncRNA 156.539-2 chr8 126513281 126513596 + 0.615385 NA Intergenic L1MD3|LINE|L1 45040 NR_156466 157638 Hs.124951 NM_174911 ENSG00000168672 LRATD2 BCMP101|FAM84B|NSE2 LRAT domain containing 2 protein-coding 160.615-13 chr5 147463008 147463360 + 0.615385 NA intron (NM_001197294, intron 1 of 13) ERV3-16A3_I-int|LTR|ERVL -9492 NM_001387 1809 Hs.519659 NM_001387 ENSG00000113657 DPYSL3 CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1 dihydropyrimidinase like 3 protein-coding 169.692-5 chr14 55550802 55551253 + 0.615385 NA Intergenic L1MC1|LINE|L1 29065 NR_027123 100129075 Hs.633724 NR_027123 ENSG00000186615 KTN1-AS1 C14orf33|MYCLo-3 KTN1 antisense RNA 1 ncRNA 171.538-7 chr4 36024603 36025012 + 0.615385 NA intron (NR_146893, intron 35 of 36) intron (NR_146893, intron 35 of 36) 219132 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 197.077-7 chr8 119145342 119145892 + 0.615385 NA Intergenic Intergenic -62746 NM_052886 114569 Hs.201083 NM_052886 ENSG00000147676 MAL2 - mal, T cell differentiation protein 2 (gene/pseudogene) protein-coding 201.077-3 chr5 29562373 29562783 + 0.615385 NA Intergenic Intergenic -166602 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA 170.077 chr1 237562418 237562705 + 0.615385 NA intron (NM_001035, intron 27 of 104) intron (NM_001035, intron 27 of 104) 91442 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 186.769 chr3 175789253 175789792 + 0.615385 NA intron (NM_207015, intron 13 of 13) intron (NM_207015, intron 13 of 13) -13189 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA 152.615-3 chr17 12400874 12401340 + 0.615385 NA Intergenic Intergenic -148861 NR_034145 284034 Hs.376614 NR_034144 ENSG00000179136 LINC00670 - long intergenic non-protein coding RNA 670 ncRNA 152.308-7 chr3 175183346 175183710 + 0.615385 NA intron (NM_207015, intron 2 of 13) L1MA6|LINE|L1 -68286 NR_046390 100862679 Hs.148810 NR_046390 ENSG00000230292 NAALADL2-AS3 - NAALADL2 antisense RNA 3 ncRNA 223.077-3 chr8 111737893 111738496 + 0.615385 NA Intergenic Intergenic 361555 NR_146282 105375706 Hs.566832 NR_146282 ENSG00000253434 LINC02237 - long intergenic non-protein coding RNA 2237 ncRNA 186.462 chr1 191694801 191695205 + 0.615385 NA Intergenic THE1B-int|LTR|ERVL-MaLR -463459 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding 162.461-3 chr19 38758759 38759274 + 0.615385 NA Intergenic AluSz|SINE|Alu 14501 NM_002307 3963 Hs.702546 NM_002307 ENSG00000205076 LGALS7 GAL7|LGALS7A galectin 7 protein-coding 162.308 chr12 60663656 60664164 + 0.615385 NA Intergenic L1MA5A|LINE|L1 974540 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 168.923 chr1 8734657 8735060 + 0.615385 NA intron (NM_001042681, intron 1 of 22) L2c|LINE|L2 82782 NM_001042681 473 Hs.463041 NM_012102 ENSG00000142599 RERE ARG|ARP|ATN1L|DNB1|NEDBEH arginine-glutamic acid dipeptide repeats protein-coding 186.462-2 chr10 59380088 59380418 + 0.615385 NA Intergenic L3b|LINE|CR1 -17072 NM_001347842 220965 Hs.607594 NM_198215 ENSG00000148541 FAM13C FAM13C1 family with sequence similarity 13 member C protein-coding 180.308-6 chr7 46305212 46305780 + 0.615385 NA Intergenic L1PB1|LINE|L1 -384224 NM_001013398 3486 Hs.450230 NM_000598 ENSG00000146674 IGFBP3 BP-53|IBP3 insulin like growth factor binding protein 3 protein-coding 222.769 chr3 197724465 197724959 + 0.615385 NA intron (NM_001145642, intron 1 of 20) intron (NM_001145642, intron 1 of 20) 12192 NM_014687 9711 Hs.478868 NM_014687 ENSG00000145016 RUBCN KIAA0226|RUBICON|SCAR15 rubicon autophagy regulator protein-coding 169.692-8 chr4 30472628 30473071 + 0.615385 NA Intergenic Intergenic -247520 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 156-4 chr10 74568481 74568846 + 0.615385 NA intron (NM_001369123, intron 7 of 9) intron (NM_001369123, intron 7 of 9) -39339 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA 166-7 chr8 84780564 84781096 + 0.615385 NA intron (NM_001354322, intron 3 of 6) intron (NM_001354322, intron 3 of 6) 74903 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 196.769-3 chr8 83935897 83936252 + 0.615385 NA Intergenic Intergenic -246713 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 180.462-2 chr2 117565849 117566172 + 0.615385 NA Intergenic L1PA12|LINE|L1 -248681 NM_006773 8886 Hs.744922 NM_006773 ENSG00000088205 DDX18 Has1|MrDb DEAD-box helicase 18 protein-coding 182.615-5 chr7 90975082 90975537 + 0.615385 NA intron (NM_012395, intron 8 of 13) intron (NM_012395, intron 8 of 13) 265493 NM_001287137 5218 Hs.258576 NM_012395 ENSG00000058091 CDK14 PFTAIRE1|PFTK1 cyclin dependent kinase 14 protein-coding 165.769-3 chr12 86076969 86077477 + 0.615385 NA intron (NM_001351286, intron 4 of 7) HERVL-int|LTR|ERVL 179168 NM_001351284 25834 Hs.589093 NM_013244 ENSG00000182050 MGAT4C GNTIVH|HGNT-IV-H MGAT4 family member C protein-coding 192.385-2 chr6 115990151 115990696 + 0.615385 NA intron (NM_002031, intron 2 of 7) L1PB4|LINE|L1 -48308 NR_027338 728402 Hs.729953 NR_027338 TPI1P3 - triosephosphate isomerase 1 pseudogene 3 pseudo 241.846 chr1 173329261 173330080 + 0.615385 NA intron (NR_037845, intron 2 of 2) intron (NR_037845, intron 2 of 2) -122339 NM_003326 7292 Hs.181097 NM_003326 ENSG00000117586 TNFSF4 CD134L|CD252|GP34|OX-40L|OX4OL|TNLG2B|TXGP1 TNF superfamily member 4 protein-coding 158.769-2 chr13 76016788 76017230 + 0.615385 NA Intergenic L2|LINE|L2 -81877 NR_047491 100861545 Hs.638962 NR_047491 ENSG00000261206 LINC00561 - long intergenic non-protein coding RNA 561 ncRNA 160.615-8 chr18 3257818 3258141 + 0.615385 NA intron (NR_130144, intron 1 of 2) intron (NR_130144, intron 1 of 2) 3839 NR_130143 104968399 Hs.464472 NR_130143 ENSG00000264235 LOC104968399 - uncharacterized LOC104968399 ncRNA 157.846-15 chr6 159279549 159280026 + 0.615385 NA Intergenic LTR44|LTR|ERV1 -103744 NR_125873 102724053 Hs.98463 NR_125873 ENSG00000234777 LINC02529 - long intergenic non-protein coding RNA 2529 ncRNA 174-3 chr11 80522037 80522354 + 0.615385 NA Intergenic L2c|LINE|L2 240608 NR_120570 101928944 Hs.547927 NR_120570 ENSG00000255178 LINC02720 - long intergenic non-protein coding RNA 2720 ncRNA 184.539 chr5 149508552 149509234 + 0.615385 NA intron (NM_001271742, intron 7 of 9) intron (NM_001271742, intron 7 of 9) 41472 NM_001271742 1452 Hs.529862 NM_001892 ENSG00000113712 CSNK1A1 CK1|CK1a|CKIa|HEL-S-77p|HLCDGP1|PRO2975 casein kinase 1 alpha 1 protein-coding 196.077 chr1 118288237 118288770 + 0.615385 NA Intergenic Intergenic -103275 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 156.615-9 chr6 141650840 141651238 + 0.615385 NA Intergenic Intergenic 437760 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding 165.231-7 chr21 22392047 22392573 + 0.615385 NA Intergenic L1MC3|LINE|L1 293693 NR_038400 54143 Hs.352631 NR_038400 ENSG00000184856 LINC00308 C21orf74|NCRNA00308|PRED16 long intergenic non-protein coding RNA 308 ncRNA 165.384 chr2 169881746 169882304 + 0.615385 NA intron (NM_172070, intron 5 of 38) (TA)n|Simple_repeat|Simple_repeat 54517 NM_172070 130507 Hs.379548 NM_172070 ENSG00000144357 UBR3 ZNF650 ubiquitin protein ligase E3 component n-recognin 3 protein-coding 155.769-4 chr14 33025122 33025684 + 0.615385 NA intron (NM_001165893, intron 1 of 10) MIRb|SINE|MIR 86524 NM_022123 64067 Hs.657892 NM_022123 ENSG00000151322 NPAS3 MOP6|PASD6|bHLHe12 neuronal PAS domain protein 3 protein-coding 180.616 chr2 115177614 115177944 + 0.615385 NA intron (NM_001321906, intron 2 of 26) AluY|SINE|Alu 15624 NM_001321909 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 182.154-2 chr12 104991901 104992273 + 0.615385 NA intron (NM_152318, intron 3 of 3) intron (NM_152318, intron 3 of 3) 5771 NM_152318 121053 Hs.295563 NM_152318 ENSG00000151131 C12orf45 - chromosome 12 open reading frame 45 protein-coding 194-3 chr4 165875092 165875644 + 0.615385 NA intron (NM_001204760, intron 1 of 9) intron (NM_001204760, intron 1 of 9) 2131 NM_001204760 7092 Hs.106513 NM_012464 ENSG00000038295 TLL1 ASD6|TLL tolloid like 1 protein-coding 175.077-4 chr18 60654704 60655167 + 0.615385 NA Intergenic Intergenic -282160 NM_005912 4160 Hs.532833 NM_005912 ENSG00000166603 MC4R BMIQ20 melanocortin 4 receptor protein-coding 214.923 chr11 16345286 16345695 + 0.615385 NA intron (NM_001367872, intron 3 of 16) intron (NM_001367872, intron 3 of 16) 11056 NM_001367873 55553 Hs.368226 NM_017508 ENSG00000110693 SOX6 HSSOX6|SOXD SRY-box transcription factor 6 protein-coding 167.615-5 chr5 75416682 75416987 + 0.615385 NA intron (NM_031361, intron 7 of 16) intron (NM_031361, intron 7 of 16) 79614 NM_000859 3156 Hs.628096 NM_000859 ENSG00000113161 HMGCR LDLCQ3 3-hydroxy-3-methylglutaryl-CoA reductase protein-coding 187.923-2 chr14 74915091 74915866 + 0.615385 NA intron (NR_163406, intron 3 of 11) intron (NR_163406, intron 3 of 11) 6964 NM_031464 83694 Hs.414481 NM_031464 ENSG00000198208 RPS6KL1 RSKL2 ribosomal protein S6 kinase like 1 protein-coding 231.846-2 chr8 121718279 121719045 + 0.615385 NA Intergenic MIR3|SINE|MIR -77222 NM_005328 3037 Hs.159226 NM_005328 ENSG00000170961 HAS2 - hyaluronan synthase 2 protein-coding 158.308-7 chr2 98342375 98342901 + 0.615385 NA Intergenic Intergenic -3517 NM_001298 1261 Hs.234785 NM_001298 ENSG00000144191 CNGA3 ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3 cyclic nucleotide gated channel alpha 3 protein-coding 170.154-7 chr7 84804053 84804545 + 0.615385 NA Intergenic L2a|LINE|L2 271823 NR_110079 101927378 Hs.539042 NR_110079 ENSG00000235139 LOC101927378 - uncharacterized LOC101927378 ncRNA 191.308-3 chr2 192965308 192965881 + 0.615385 NA Intergenic Intergenic 215749 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA 213.231-2 chr11 111193603 111194064 + 0.615385 NA Intergenic Tigger1|DNA|TcMar-Tigger -51892 NM_198498 341032 Hs.298685 NM_198498 ENSG00000150750 C11orf53 - chromosome 11 open reading frame 53 protein-coding 162.461-2 chr15 95741936 95742355 + 0.615385 NA Intergenic Intergenic 309052 NR_027132 145820 Hs.652702 NR_027132 ENSG00000259134 LINC00924 - long intergenic non-protein coding RNA 924 ncRNA 218.692 chr10 88554982 88555636 + 0.615385 NA intron (NM_018363, intron 4 of 6) MSTB|LTR|ERVL-MaLR 28009 NM_001031709 55328 Hs.149849 NM_018363 ENSG00000184719 RNLS C10orf59|RENALASE renalase, FAD dependent amine oxidase protein-coding 152.154-8 chr18 66385421 66385788 + 0.615385 NA Intergenic Intergenic 218486 NM_021153 28513 Hs.42771 NM_021153 ENSG00000071991 CDH19 CDH7|CDH7L2 cadherin 19 protein-coding 155.692-6 chr3 104542800 104543264 + 0.615385 NA Intergenic MamRep605|LTR?|LTR? -823681 NM_001243281 214 Hs.591293 NM_001627 ENSG00000170017 ALCAM CD166|MEMD activated leukocyte cell adhesion molecule protein-coding 154.077-4 chr9 126197976 126198569 + 0.615385 NA Intergenic L1ME3Cz|LINE|L1 77643 NR_121584 101929116 Hs.382124 NR_121584 ENSG00000228392 LOC101929116 - uncharacterized LOC101929116 ncRNA 213.846-2 chr3 378112 378600 + 0.615385 NA intron (NM_001253388, intron 14 of 24) intron (NM_001253388, intron 14 of 24) 7439 NR_110739 101927193 Hs.677744 NR_110739 ENSG00000234661 CHL1-AS1 - CHL1 antisense RNA 1 ncRNA 183.692-8 chr8 124701857 124702239 + 0.615385 NA intron (NM_001282971, intron 2 of 14) intron (NM_001282971, intron 2 of 14) 26425 NM_001363296 9788 Hs.336994 NM_014751 ENSG00000170873 MTSS1 MIM|MIMA|MIMB MTSS I-BAR domain containing 1 protein-coding 195.077-4 chr9 105698164 105698785 + 0.615385 NA intron (NM_018112, intron 1 of 5) L1ME1|LINE|L1 3933 NM_018112 55151 Hs.411925 NM_018112 ENSG00000095209 TMEM38B C9orf87|D4Ertd89e|OI14|TRIC-B|TRICB|bA219P18.1 transmembrane protein 38B protein-coding 203.538-4 chr3 38287266 38287817 + 0.615385 NA intron (NM_001320033, intron 1 of 10) L1ME3F|LINE|L1 5247 NM_001320033 9389 Hs.165559 NM_004803 ENSG00000144671 SLC22A14 OCTL2|OCTL4|ORCTL4 solute carrier family 22 member 14 protein-coding 194.154-5 chr20 51084537 51084876 + 0.615385 NA Intergenic Intergenic -61599 NM_002237 3755 Hs.118695 NM_002237 ENSG00000026559 KCNG1 K13|KCNG|KV6.1|kH2 potassium voltage-gated channel modifier subfamily G member 1 protein-coding 153.923-2 chr12 83518552 83519101 + 0.615385 NA Intergenic Intergenic 831671 NM_001320322 160335 Hs.577775 NM_152588 ENSG00000179104 TMTC2 IBDBP1 transmembrane O-mannosyltransferase targeting cadherins 2 protein-coding 159.077 chr1 237564930 237565188 + 0.615385 NA intron (NM_001035, intron 27 of 104) intron (NM_001035, intron 27 of 104) 93940 NR_039626 100616141 NR_039626 ENSG00000266262 MIR4428 - microRNA 4428 ncRNA 213.308-5 chr4 30458427 30459002 + 0.615385 NA Intergenic Intergenic -261655 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 210.307 chr8 84165920 84166542 + 0.615385 NA Intergenic Chap1_Mam|DNA|hAT-Charlie -16556 NM_001354325 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 157.231 chr1 63298908 63299223 + 0.615385 NA intron (NR_038252, intron 3 of 11) L2c|LINE|L2 18192 NR_038252 199899 Hs.116210 NR_038252 ENSG00000224209 LINC00466 - long intergenic non-protein coding RNA 466 ncRNA 225.231 chr3 79955696 79956358 + 0.615385 NA Intergenic Intergenic -188029 NM_002941 6091 Hs.744218 NM_002941 ENSG00000169855 ROBO1 DUTT1|SAX3 roundabout guidance receptor 1 protein-coding 159.384-2 chr14 89520693 89521197 + 0.615385 NA intron (NM_001085471, intron 1 of 6) L1ME1|LINE|L1 -55271 NR_024620 29018 Hs.673124 NM_014099 ENSG00000259073 FOXN3-AS2 PRO1768 FOXN3 antisense RNA 2 ncRNA 175.692-3 chr2 67426520 67426861 + 0.615385 NA Intergenic Intergenic 29357 NM_019002 54465 Hs.353022 NM_019002 ENSG00000143971 ETAA1 ETAA16 ETAA1 activator of ATR kinase protein-coding 152.461-2 chr7 72486311 72486893 + 0.615385 NA Intergenic AluSz|SINE|Alu -39459 NM_001363460 83698 Hs.592750 NM_031468 ENSG00000183166 CALN1 CABP8 calneuron 1 protein-coding 159.538-2 chr11 30804431 30804918 + 0.615385 NA Intergenic MER21C|LTR|ERVL 188012 NM_020869 341019 Hs.127405 NM_020869 ENSG00000170959 DCDC1 DCDC5 doublecortin domain containing 1 protein-coding 226.846-2 chr1 192835206 192835810 + 0.615385 NA Intergenic Intergenic 26469 NM_002923 5997 Hs.78944 NM_002923 ENSG00000116741 RGS2 G0S8 regulator of G protein signaling 2 protein-coding 155.615-4 chr17 71348243 71348807 + 0.615385 NA Intergenic Intergenic -146346 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 221.231 chr1 69638099 69638542 + 0.615385 NA intron (NM_001366842, intron 1 of 7) intron (NM_001366842, intron 1 of 7) 68979 NM_001366842 57554 Hs.479658 NM_020794 ENSG00000033122 LRRC7 DENSIN leucine rich repeat containing 7 protein-coding 220.539-2 chrX 155052454 155053148 + 0.615385 NA intron (NM_023934, intron 4 of 4) intron (NM_023934, intron 4 of 4) 18335 NM_001018025 4515 Hs.6917 NM_014221 ENSG00000214827 MTCP1 P13MTCP1|p8MTCP1 mature T cell proliferation 1 protein-coding 174-2 chr10 32478908 32479219 + 0.615385 NA intron (NR_109826, intron 9 of 16) L1MC2|LINE|L1 32923 NR_109826 79741 Hs.585464 NM_024688 ENSG00000216937 CCDC7 BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68 coiled-coil domain containing 7 protein-coding 171.769-2 chr14 44816238 44816982 + 0.615385 NA Intergenic Intergenic -17484 NR_146457 101927351 Hs.196842 NR_146457 LINC02302 - long intergenic non-protein coding RNA 2302 ncRNA 193.231-2 chr1 151349789 151350364 + 0.615385 NA Intergenic Intergenic -2783 NM_000449 5993 Hs.632472 NM_000449 ENSG00000143390 RFX5 - regulatory factor X5 protein-coding 196.615-4 chr8 89208816 89209350 + 0.615385 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 548628 NR_125822 101929709 Hs.651324 NR_125822 ENSG00000251136 LOC101929709 - uncharacterized LOC101929709 ncRNA 239.538 chr14 57205047 57205544 + 0.615385 NA 3' UTR (NM_006544, exon 18 of 18) 3' UTR (NM_006544, exon 18 of 18) 63610 NM_006544 10640 Hs.743987 NM_006544 ENSG00000070367 EXOC5 HSEC10|PRO1912|SEC10|SEC10L1|SEC10P exocyst complex component 5 protein-coding 154.077-3 chr4 113868367 113868747 + 0.615385 NA Intergenic L1M3|LINE|L1 -106630 NM_172127 817 Hs.144114 NM_001221 ENSG00000145349 CAMK2D CAMKD calcium/calmodulin dependent protein kinase II delta protein-coding 159.692 chr1 214968811 214969160 + 0.615385 NA Intergenic Intergenic -36557 NM_001017424 3776 Hs.497745 NM_014217 ENSG00000082482 KCNK2 K2p2.1|TPKC1|TREK|TREK-1|TREK1|hTREK-1c|hTREK-1e potassium two pore domain channel subfamily K member 2 protein-coding 170.923 chr1 90144799 90145365 + 0.615385 NA Intergenic L2a|LINE|L2 149972 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding 156.077 chr4 43806564 43806869 + 0.615385 NA Intergenic MIR|SINE|MIR -210145 NR_131959 100506827 Hs.156197 NR_131958 ENSG00000251350 LINC02475 LVCAT1 long intergenic non-protein coding RNA 2475 ncRNA 167.923 chr15 78566588 78566952 + 0.615385 NA intron (NM_001307945, intron 1 of 5) intron (NM_001307945, intron 1 of 5) 1250 NM_000745 1138 Hs.1614 NM_000745 ENSG00000169684 CHRNA5 LNCR2 cholinergic receptor nicotinic alpha 5 subunit protein-coding 227.077 chr3 112844462 112844938 + 0.615385 NA intron (NM_001370552, intron 1 of 7) AluSq|SINE|Alu 1250 NM_001199215 344807 Hs.531814 NM_001008784 ENSG00000206531 CD200R1L CD200R2|CD200RLa CD200 receptor 1 like protein-coding 201 chr1 52886107 52886697 + 0.615385 NA intron (NM_001307931, intron 11 of 12) MIRb|SINE|MIR 35338 NM_001319958 55268 Hs.476319 NM_018281 ENSG00000121310 ECHDC2 - enoyl-CoA hydratase domain containing 2 protein-coding 169.769-8 chr9 68965615 68966066 + 0.615385 NA intron (NR_110647, intron 1 of 2) AluSx|SINE|Alu 10001 NR_110647 101927069 Hs.663405 NR_110647 LOC101927069 - uncharacterized LOC101927069 ncRNA 204.615-2 chr2 50259408 50259783 + 0.615385 NA intron (NM_001330093, intron 17 of 22) intron (NM_001330093, intron 17 of 22) 88159 NM_001330097 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 157.846-2 chr1 110401752 110402173 + 0.615385 NA intron (NM_006402, intron 3 of 3) intron (NM_006402, intron 3 of 3) -5847 NR_102697 101410535 Hs.559121 NR_102697 LAMTOR5-AS1 - LAMTOR5 antisense RNA 1 ncRNA 180.308-8 chr8 122444011 122444492 + 0.615385 NA intron (NR_131202, intron 2 of 3) intron (NR_131202, intron 2 of 3) 124393 NR_131202 105375734 Hs.628341 NR_131202 SMILR - smooth muscle induced lncRNA, enhancer of proliferation ncRNA 178.462-7 chr9 37490943 37491402 + 0.615385 NA intron (NM_022490, intron 4 of 11) intron (NM_022490, intron 4 of 11) 5224 NM_022490 64425 Hs.591087 NM_022490 ENSG00000137054 POLR1E PAF53|PRAF1 RNA polymerase I subunit E protein-coding 197.615-3 chr5 75170415 75171093 + 0.538462 NA intron (NM_001164443, intron 10 of 24) L1MEf|LINE|L1 66124 NM_001164443 256006 Hs.482533 NM_001164443 ENSG00000145700 ANKRD31 - ankyrin repeat domain 31 protein-coding 162.846-9 chr7 85797014 85797329 + 0.538462 NA Intergenic L1MA3|LINE|L1 376049 NR_134240 105375380 Hs.679608 NR_134240 ENSG00000225128 LINC00972 - long intergenic non-protein coding RNA 972 ncRNA 159.231-3 chr14 38833058 38833568 + 0.538462 NA intron (NR_039982, intron 4 of 4) intron (NR_039982, intron 4 of 4) -49283 NR_135256 105370457 Hs.128254 NR_135256 LOC105370457 - uncharacterized LOC105370457 ncRNA 165.231-3 chr16 35852979 35853537 + 0.538462 NA Intergenic Tigger1|DNA|TcMar-Tigger 106706 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA 165.769-7 chr16 53804976 53805560 + 0.538462 NA intron (NM_001363897, intron 1 of 7) intron (NM_001363897, intron 1 of 7) 101112 NM_001080432 79068 Hs.528833 NM_001080432 ENSG00000140718 FTO ALKBH9|BMIQ14|GDFD FTO alpha-ketoglutarate dependent dioxygenase protein-coding 164.769-6 chr3 44484797 44485406 + 0.538462 NA Intergenic L1MC1|LINE|L1 -7431 NM_181489 353274 Hs.250481 NM_181489 ENSG00000185219 ZNF445 ZKSCAN15|ZNF168|ZSCAN47 zinc finger protein 445 protein-coding 182.615-3 chr3 87867898 87868540 + 0.538462 NA intron (NM_001322210, intron 2 of 2) intron (NM_001322210, intron 2 of 2) 75513 NM_001322210 3355 Hs.248136 NM_000866 ENSG00000179097 HTR1F 5-HT-1F|5-HT1F|5HT6|HTR1EL|MR77 5-hydroxytryptamine receptor 1F protein-coding 158.615-3 chr2 16164740 16165426 + 0.538462 NA Intergenic Intergenic 114656 NR_126559 104797537 Hs.435748 NR_126559 ENSG00000236289 GACAT3 LINC01458|lncRNA-AC130710 gastric cancer associated transcript 3 ncRNA 164.385-4 chr9 14616461 14616861 + 0.538462 NA non-coding (NR_148716, exon 11 of 11) non-coding (NR_148716, exon 11 of 11) 76771 NM_001354126 340481 Hs.649522 NM_178566 ENSG00000175893 ZDHHC21 DHHC-21|DHHC21|DNZ1|HSPC097 zinc finger DHHC-type containing 21 protein-coding 171.154-5 chr3 54294738 54295247 + 0.538462 NA intron (NM_018398, intron 2 of 37) intron (NM_018398, intron 2 of 37) 172440 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding 164-4 chr2 55619893 55620636 + 0.538462 NA Intergenic Intergenic -2642 NM_001282850 57223 Hs.516182 NM_020463 ENSG00000275052 PPP4R3B FLFL2|PP4R3B|PSY2|SMEK2|smk1 protein phosphatase 4 regulatory subunit 3B protein-coding 186.077 chr5 22797415 22797971 + 0.538462 NA intron (NM_004061, intron 1 of 14) intron (NM_004061, intron 1 of 14) 55651 NM_001364106 1010 Hs.113684 NM_004061 ENSG00000154162 CDH12 CDHB cadherin 12 protein-coding 160.769-3 chr11 20749668 20750067 + 0.538462 NA intron (NM_201551, intron 2 of 18) L1ME3|LINE|L1 80281 NM_006157 4745 Hs.657172 NM_006157 ENSG00000165973 NELL1 IDH3GL|NRP1 neural EGFL like 1 protein-coding 159.308-2 chr13 106560768 106561293 + 0.538462 NA intron (NM_018011, intron 1 of 3) intron (NM_018011, intron 1 of 3) 7107 NM_018011 55082 Hs.508644 NM_018011 ENSG00000134884 ARGLU1 - arginine and glutamate rich 1 protein-coding 159.462 chr14 70256110 70256505 + 0.538462 NA Intergenic Zaphod3|DNA|hAT-Tip100 -8506 NR_003951 145241 Hs.712468 NR_003951 ENSG00000235812 ADAM21P1 ADAM21P ADAM metallopeptidase domain 21 pseudogene 1 pseudo 182.846 chr10 9847210 9847875 + 0.538462 NA Intergenic Intergenic -211180 NR_120636 101928298 Hs.385576 NR_120636 ENSG00000224788 LINC02670 - long intergenic non-protein coding RNA 2670 ncRNA 172.615-8 chr4 16447642 16448128 + 0.538462 NA Intergenic Intergenic 221222 NR_027696 202020 Hs.445315 NM_152684 ENSG00000263327 TAPT1-AS1 - TAPT1 antisense RNA 1 (head to head) ncRNA 214.769-2 chr8 120869579 120870076 + 0.538462 NA Intergenic L1ME3|LINE|L1 -57781 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 171.154-3 chr15 64255575 64256000 + 0.538462 NA intron (NM_001329607, intron 3 of 11) L3b|LINE|CR1 -92632 NM_000942 5479 Hs.434937 NM_000942 ENSG00000166794 PPIB B|CYP-S1|CYPB|HEL-S-39|OI9|SCYLP peptidylprolyl isomerase B protein-coding 168.692-8 chr7 93213265 93213655 + 0.538462 NA intron (NM_001346642, intron 3 of 9) intron (NM_001346642, intron 3 of 9) 6111 NM_198151 253012 Hs.443169 NM_198151 ENSG00000188175 HEPACAM2 MIKI HEPACAM family member 2 protein-coding 153.692-11 chr8 134647808 134648447 + 0.538462 NA intron (NM_020863, intron 2 of 15) L1MA9|LINE|L1 48428 NM_001167583 57623 Hs.446172 NM_020863 ENSG00000066827 ZFAT AITD3|ZFAT1|ZNF406 zinc finger and AT-hook domain containing protein-coding 172.769-6 chr5 29967304 29967809 + 0.538462 NA Intergenic L1PREC2|LINE|L1 86996 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 205.077-3 chr3 96974366 96974887 + 0.538462 NA intron (NM_001080448, intron 2 of 17) intron (NM_001080448, intron 2 of 17) 160032 NM_001278301 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 205.615 chr13 111934657 111935190 + 0.538462 NA Intergenic L1PB1|LINE|L1 -37387 NR_120392 100505996 Hs.654853 NR_120392 ENSG00000224243 SOX1-OT LINC00403 SOX1 overlapping transcript ncRNA 158.923 chr11 102713026 102713493 + 0.538462 NA 3' UTR (NM_002424, exon 10 of 10) 3' UTR (NM_002424, exon 10 of 10) -7490 NM_022122 64066 Hs.534479 NM_022122 ENSG00000137675 MMP27 MMP-27 matrix metallopeptidase 27 protein-coding 191.385-6 chr6 164922026 164922701 + 0.538462 NA Intergenic L1ME3E|LINE|L1 -100300 NR_131926 105378111 NR_131926 MEAT6 - melanoma-associated transcript 6 ncRNA 166.538-5 chr7 37984793 37985293 + 0.538462 NA Intergenic Intergenic 63724 NM_001242948 54749 Hs.563491 NM_017549 ENSG00000086289 EPDR1 EPDR|MERP-1|MERP1|UCC1 ependymin related 1 protein-coding 159.769-4 chr16 58861293 58861820 + 0.538462 NA Intergenic Intergenic -127240 NM_001286220 2806 Hs.599470 NM_002080 ENSG00000125166 GOT2 KAT4|KATIV|KYAT4|mitAAT glutamic-oxaloacetic transaminase 2 protein-coding 279.846-2 chr2 139341320 139342041 + 0.538462 NA Intergenic Intergenic 444356 NR_033658 647012 Hs.639411 NR_033658 YY1P2 - YY1 transcription factor pseudogene 2 pseudo 167.538-11 chr7 29258682 29259083 + 0.538462 NA intron (NM_001293072, intron 1 of 12) L1MC4a|LINE|L1 -49912 NR_120522 102724484 Hs.638665 NR_120522 LOC102724484 - uncharacterized LOC102724484 ncRNA 152.154-12 chr6 50046280 50046722 + 0.538462 NA intron (NM_001369057, intron 1 of 1) L1ME3A|LINE|L1 3428 NM_001369057 245915 Hs.571092 NM_001037498 ENSG00000180872 DEFB112 DEFB-12 defensin beta 112 protein-coding 168.539-6 chrX 98952330 98952717 + 0.538462 NA Intergenic L1MA1|LINE|L1 -1387988 NR_125391 10824 Hs.654372 NR_125391 ENSG00000236256 DIAPH2-AS1 EPAG DIAPH2 antisense RNA 1 ncRNA 165.308-8 chr6 36609306 36609635 + 0.538462 NA Intergenic MIRb|SINE|MIR 13042 NR_037491 100500885 NR_037491 ENSG00000263894 MIR3925 - microRNA 3925 ncRNA 180.846-3 chr4 80676592 80677125 + 0.538462 NA intron (NM_001206997, intron 4 of 6) L1MA4|LINE|L1 341138 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding 164.231-9 chr6 135822026 135822546 + 0.538462 NA Intergenic Intergenic -29415 NM_018945 27115 Hs.744230 NM_018945 ENSG00000171408 PDE7B bA472E5.1 phosphodiesterase 7B protein-coding 152.154-7 chr18 58744608 58745125 + 0.538462 NA intron (NM_006785, intron 15 of 16) intron (NM_006785, intron 15 of 16) -69014 NR_146904 105372147 Hs.210837 NR_146904 ENSG00000267593 LINC01926 - long intergenic non-protein coding RNA 1926 ncRNA 198.461-2 chr8 128293684 128294272 + 0.538462 NA Intergenic MIRb|SINE|MIR 143862 NR_031613 100302281 NR_031613 ENSG00000221261 MIR1208 MIRN1208|hsa-mir-1208 microRNA 1208 ncRNA 166.308-3 chr2 24125837 24126352 + 0.538462 NA intron (NM_001145710, intron 2 of 10) L1ME1|LINE|L1 2625 NM_001145710 375190 Hs.710370 NM_198553 ENSG00000219626 FAM228B - family with sequence similarity 228 member B protein-coding 153-7 chr4 140478545 140478953 + 0.538462 NA intron (NM_001277353, intron 3 of 10) MER58B|DNA|hAT-Charlie 19544 NM_001277353 152586 Hs.189067 NM_001034840 ENSG00000205301 MGAT4D GnT1IP MGAT4 family member D protein-coding 161.308 chr1 69052190 69052678 + 0.538462 NA Intergenic LTR16B1|LTR|ERVL -3464 NR_146608 105378785 Hs.127911 NR_146608 ENSG00000223883 LINC01707 - long intergenic non-protein coding RNA 1707 ncRNA 155.385 chr1 57441004 57441327 + 0.538462 NA intron (NM_001353980, intron 4 of 5) L1PA16|LINE|L1 -16244 NM_001353983 1600 Hs.477370 NM_021080 ENSG00000173406 DAB1 SCA37 DAB adaptor protein 1 protein-coding 151.769 chr1 150604917 150605292 + 0.538462 NA Intergenic AluSq|SINE|Alu 24029 NM_207047 2029 Hs.632456 NM_004436 ENSG00000143420 ENSA ARPP-19e endosulfine alpha protein-coding 153.461-4 chrX 153445268 153445733 + 0.538462 NA intron (NM_080701, intron 1 of 1) intron (NM_080701, intron 1 of 1) 987 NM_080701 11219 Hs.644635 NM_080699 ENSG00000183479 TREX2 - three prime repair exonuclease 2 protein-coding 168.077-4 chr22 27223303 27223680 + 0.538462 NA intron (NM_001350812, intron 2 of 2) MLT1F1|LTR|ERVL-MaLR 1188 NM_001350812 105372978 NM_001350812 LINC01638 - long intergenic non-protein coding RNA 1638 protein-coding 163-3 chr4 74601174 74601668 + 0.538462 NA Intergenic Tigger1|DNA|TcMar-Tigger 156285 NM_001657 374 Hs.270833 NM_001657 ENSG00000109321 AREG AR|AREGB|CRDGF|SDGF amphiregulin protein-coding 152.846-3 chr22 28225737 28226143 + 0.538462 NA intron (NM_001145418, intron 5 of 22) L1ME1|LINE|L1 -233929 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA 156.923-13 chr20 16369410 16370049 + 0.538462 NA intron (NM_001199866, intron 22 of 22) UCON105|Unknown|Unknown 203719 NM_024704 55614 Hs.101774 NM_024704 ENSG00000089177 KIF16B C20orf23|KISC20ORF|SNX23 kinesin family member 16B protein-coding 184.538 chr10 52138763 52139251 + 0.538462 NA intron (NM_001098512, intron 8 of 17) intron (NM_001098512, intron 8 of 17) 175121 NR_038277 100506939 Hs.584791 NR_038277 PRKG1-AS1 - PRKG1 antisense RNA 1 ncRNA 154.231-7 chr7 141538494 141538987 + 0.538462 NA Intergenic Intergenic -12670 NM_001364948 55750 Hs.685880 NM_018238 ENSG00000006530 AGK CATC5|CTRCT38|MTDPS10|MULK acylglycerol kinase protein-coding 178.462-2 chr10 83623864 83624309 + 0.538462 NA Intergenic Intergenic 53003 NR_134317 105378397 Hs.147725 NR_134317 LINC02650 - long intergenic non-protein coding RNA 2650 ncRNA 169.538-4 chr18 7862152 7862607 + 0.538462 NA intron (NM_002845, intron 2 of 30) Charlie4a|DNA|hAT-Charlie 295063 NM_001105244 5797 Hs.49774 NM_002845 ENSG00000173482 PTPRM PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu protein tyrosine phosphatase receptor type M protein-coding 155.923-2 chr15 64669009 64669371 + 0.538462 NA intron (NM_015042, intron 2 of 8) L1ME4b|LINE|L1 34091 NM_001301302 4947 Hs.744924 NM_002537 ENSG00000180304 OAZ2 AZ2 ornithine decarboxylase antizyme 2 protein-coding 170.615 chr1 70885627 70886165 + 0.538462 NA intron (NR_028293, intron 2 of 4) intron (NR_028293, intron 2 of 4) -160610 NR_038420 100132618 Hs.720513 NR_038420 ZRANB2-AS1 - ZRANB2 antisense RNA 1 ncRNA 205.923-4 chr2 68172966 68173580 + 0.538462 NA intron (NM_001329916, intron 5 of 5) AluJr4|SINE|Alu 15385 NM_001329917 56902 Hs.262858 NM_020143 ENSG00000115946 PNO1 KHRBP1|RRP20 partner of NOB1 homolog protein-coding 162.692-6 chr5 63063033 63063604 + 0.538462 NA Intergenic Intergenic 484499 NM_181506 100130733 Hs.721348 NM_181506 ENSG00000186105 LRRC70 SLRN leucine rich repeat containing 70 protein-coding 167.692-9 chr8 125209923 125210523 + 0.538462 NA intron (NM_001349486, intron 5 of 7) MIR|SINE|MIR 118363 NM_173685 286053 Hs.388297 NM_173685 ENSG00000156831 NSMCE2 C8orf36|MMS21|NSE2|ZMIZ7 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding 190.692-3 chr6 131001564 131002322 + 0.538462 NA intron (NM_001135554, intron 1 of 14) intron (NM_001135554, intron 1 of 14) -1176 NM_001252660 2037 Hs.486470 NM_001431 ENSG00000079819 EPB41L2 4.1-G|4.1G erythrocyte membrane protein band 4.1 like 2 protein-coding 156.385-2 chr4 96372521 96372881 + 0.538462 NA intron (NR_147149, intron 1 of 3) intron (NR_147149, intron 1 of 3) 61998 NR_147149 105377338 NR_147149 LINC02267 - long intergenic non-protein coding RNA 2267 ncRNA 159.769-8 chr4 91831623 91832246 + 0.538462 NA Intergenic L1ME2|LINE|L1 445368 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 164.846 chr1 4173811 4174219 + 0.538462 NA Intergenic MLT1C|LTR|ERVL-MaLR -225035 NR_147024 105376672 Hs.435087 NR_147024 ENSG00000226374 LINC01345 - long intergenic non-protein coding RNA 1345 ncRNA 189.538 chr10 45520546 45521265 + 0.538462 NA intron (NM_001282866, intron 2 of 7) Charlie2a|DNA|hAT-Charlie 14466 NM_001282866 220972 Hs.499489 NM_145021 ENSG00000165406 MARCH8 CMIR|MARCH-VIII|MIR|RNF178|c-MIR membrane associated ring-CH-type finger 8 protein-coding 173.308-6 chr7 77224658 77225152 + 0.538462 NA intron (NM_020879, intron 2 of 18) L2c|LINE|L2 -25086 NM_006682 10875 Hs.520989 NM_006682 ENSG00000127951 FGL2 T49|pT49 fibrinogen like 2 protein-coding 173.308-8 chrX 128662479 128662999 + 0.538462 NA Intergenic Intergenic -610336 NM_138289 139741 Hs.680125 NM_138289 ENSG00000123165 ACTRT1 AIP1|ARIP1|ARPT1|HSD27 actin related protein T1 protein-coding 197.385-6 chr9 116891985 116892420 + 0.538462 NA intron (NM_014010, intron 9 of 21) Kanga2_a|DNA|TcMar-Tc2 204897 NM_001099679 22954 Hs.591910 NM_012210 ENSG00000119401 TRIM32 BBS11|HT2A|LGMD2H|LGMDR8|TATIP tripartite motif containing 32 protein-coding 151.846-3 chr18 75738257 75738774 + 0.538462 NA Intergenic L1ME1|LINE|L1 -26112 NR_134646 100505853 Hs.146758 NR_134646 ENSG00000261194 LINC01898 - long intergenic non-protein coding RNA 1898 ncRNA 162.846-4 chr2 169567411 169567745 + 0.538462 NA intron (NM_001322049, intron 2 of 12) intron (NM_001322049, intron 2 of 12) 6287 NM_024622 79675 Hs.529276 NM_024622 ENSG00000138399 FASTKD1 - FAST kinase domains 1 protein-coding 161.539-2 chr17 14568155 14568482 + 0.538462 NA Intergenic Intergenic 264578 NR_026880 84815 Hs.597458 NM_032729 ENSG00000266709 MGC12916 - uncharacterized protein MGC12916 ncRNA 201.308 chr14 41416781 41417243 + 0.538462 NA Intergenic MLT1J-int|LTR|ERVL-MaLR -189844 NM_152447 145581 Hs.136893 NM_152447 ENSG00000165379 LRFN5 C14orf146|FIGLER8|SALM5 leucine rich repeat and fibronectin type III domain containing 5 protein-coding 173.077-2 chr3 90270377 90270763 + 0.538462 NA Intergenic ALR/Alpha|Satellite|centr 1162949 NM_182644 2042 Hs.123642 NM_005233 ENSG00000044524 EPHA3 EK4|ETK|ETK1|HEK|HEK4|TYRO4 EPH receptor A3 protein-coding 165.385 chr10 94536699 94537099 + 0.538462 NA TTS (NM_015188) TTS (NM_015188) -8868 NM_001289067 3070 Hs.463677 NM_018063 ENSG00000119969 HELLS ICF4|LSH|Nbla10143|PASG|SMARCA6 helicase, lymphoid specific protein-coding 160.692-5 chr5 41655854 41656357 + 0.538462 NA Intergenic L1ME4a|LINE|L1 -145504 NM_001005473 345557 Hs.145404 NM_001005473 ENSG00000182836 PLCXD3 - phosphatidylinositol specific phospholipase C X domain containing 3 protein-coding 199.615 chr10 54474026 54474603 + 0.538462 NA intron (NM_001142773, intron 2 of 31) MIRb|SINE|MIR -11916 NR_134503 105378311 Hs.623892 NR_134503 ENSG00000234173 LOC105378311 - uncharacterized LOC105378311 ncRNA 152-12 chr8 80962500 80963045 + 0.538462 NA Intergenic Intergenic -87991 NM_001033723 619279 Hs.434957 NM_032651 ENSG00000164684 ZNF704 Gig1 zinc finger protein 704 protein-coding 226.615-3 chr13 87061891 87062581 + 0.538462 NA Intergenic Intergenic 150316 NR_132371 106144533 Hs.525107 NR_132371 LINC00430 - long intergenic non-protein coding RNA 430 ncRNA 228.692 chr12 14610037 14610557 + 0.538462 NA intron (NR_120465, intron 2 of 5) L1M1|LINE|L1 -42414 NM_024829 79887 Hs.131933 NM_024829 ENSG00000121316 PLBD1 - phospholipase B domain containing 1 protein-coding 151.846-5 chr4 31873811 31874260 + 0.538462 NA Intergenic Intergenic -123344 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 203.308-2 chr3 144662540 144663195 + 0.538462 NA Intergenic MLT1B|LTR|ERVL-MaLR 689786 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding 172-2 chr18 2507647 2507990 + 0.538462 NA Intergenic L1ME4b|LINE|L1 63687 NM_022840 64863 Hs.126888 NM_022840 ENSG00000101574 METTL4 HsT661 methyltransferase like 4 protein-coding 170.692 chr12 85500707 85501293 + 0.538462 NA Intergenic Intergenic 220780 NM_006982 8092 Hs.41683 NM_006982 ENSG00000180318 ALX1 CART1|FND3|HEL23 ALX homeobox 1 protein-coding 221-2 chr5 131180122 131180774 + 0.538462 NA intron (NR_121658, intron 2 of 2) intron (NR_121658, intron 2 of 2) 9504 NM_001293735 90624 Hs.115467 NM_181705 ENSG00000186687 LYRM7 C5orf31|MC3DN8|MZM1L LYR motif containing 7 protein-coding 167.231-2 chr12 65829168 65829513 + 0.538462 NA intron (NM_001300918, intron 2 of 4) intron (NM_001300918, intron 2 of 4) -2366 NR_026825 204010 Hs.558686 NR_026825 ENSG00000241749 RPSAP52 RPSA_17_1251 ribosomal protein SA pseudogene 52 pseudo 190.615-8 chr5 52110393 52111100 + 0.538462 NA Intergenic L1MA2|LINE|L1 102715 NR_147166 105378960 Hs.639310 NR_147166 ENSG00000248789 LINC02118 - long intergenic non-protein coding RNA 2118 ncRNA 170.385-6 chr8 137965027 137965375 + 0.538462 NA intron (NR_161374, intron 2 of 7) intron (NR_161374, intron 2 of 7) 118344 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 152.231 chr17 59476785 59477163 + 0.538462 NA intron (NR_110813, intron 2 of 2) AluJr4|SINE|Alu 49883 NR_110813 101927728 Hs.569720 NR_110813 ENSG00000265313 LINC01476 - long intergenic non-protein coding RNA 1476 ncRNA 154.692-2 chr2 151416454 151416846 + 0.538462 NA exon (NM_001177663, exon 5 of 35) exon (NM_001177663, exon 5 of 35) 6748 NM_001177663 55183 Hs.536537 NM_018151 ENSG00000080345 RIF1 - replication timing regulatory factor 1 protein-coding 187.538-5 chrX 38715775 38716300 + 0.538462 NA Intergenic Intergenic -85395 NM_001098791 58526 Hs.522605 NM_021242 ENSG00000165175 MID1IP1 G12-like|MIG12|S14R|STRAIT11499|THRSPL MID1 interacting protein 1 protein-coding 154.923-2 chr1 162468957 162469418 + 0.538462 NA Intergenic Intergenic -27987 NM_001184763 127933 Hs.127310 NM_144624 ENSG00000152332 UHMK1 KIS|KIST|P-CIP2 U2AF homology motif kinase 1 protein-coding 202.615-3 chr2 103155908 103156489 + 0.538462 NA Intergenic Intergenic -171769 NR_135530 105373519 NR_135530 ENSG00000224095 LINC01935 - long intergenic non-protein coding RNA 1935 ncRNA 155.308-8 chr9 82212927 82213304 + 0.538462 NA Intergenic L1MB8|LINE|L1 224343 NM_001001670 389763 Hs.209545 NM_001001670 ENSG00000214929 SPATA31D1 FAM75D1 SPATA31 subfamily D member 1 protein-coding 166.846-6 chr5 4319131 4319658 + 0.538462 NA Intergenic Intergenic -454087 NR_104619 101929153 Hs.385526 NR_104619 ENSG00000249521 LINC02114 - long intergenic non-protein coding RNA 2114 ncRNA 165.231-16 chr8 106666063 106666642 + 0.538462 NA intron (NM_181354, intron 1 of 13) MER3|DNA|hAT-Charlie 8544 NM_181354 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding 194.462-4 chr5 24952751 24953182 + 0.538462 NA Intergenic L1MC4|LINE|L1 -112383 NR_037896 340107 Hs.145181 NR_037896 ENSG00000248908 LINC02239 - long intergenic non-protein coding RNA 2239 ncRNA 167.616-2 chr7 33392668 33393010 + 0.538462 NA intron (NM_001348037, intron 18 of 20) intron (NM_001348037, intron 18 of 20) 263275 NM_198428 27241 Hs.372360 NM_014451 ENSG00000122507 BBS9 B1|C18|D1|PTHB1 Bardet-Biedl syndrome 9 protein-coding 154.692 chr17 7471448 7471868 + 0.538462 NA intron (NM_020899, intron 1 of 3) intron (NM_020899, intron 1 of 3) 7973 NM_001128833 57659 Hs.35096 NM_020899 ENSG00000174282 ZBTB4 KAISO-L1|ZNF903 zinc finger and BTB domain containing 4 protein-coding 161.615-7 chr20 49070575 49071033 + 0.538462 NA intron (NM_001256135, intron 8 of 23) AluJo|SINE|Alu 24492 NM_001316 1434 Hs.90073 NM_001316 ENSG00000124207 CSE1L CAS|CSE1|XPO2 chromosome segregation 1 like protein-coding 158.077-9 chr6 64375099 64375439 + 0.538462 NA intron (NM_001292009, intron 29 of 43) intron (NM_001292009, intron 29 of 43) 568433 NR_157848 112935969 NR_157848 SCAT8 EYS-AS1 S-phase cancer associated transcript 8 ncRNA 167.077-11 chr7 110278919 110279357 + 0.538462 NA Intergenic AluJb|SINE|Alu -318925 NR_003024 442720 Hs.530096 NR_003024 ENSG00000237064 EIF3IP1 RG208K23 eukaryotic translation initiation factor 3 subunit I pseudogene 1 pseudo 171 chr12 59917229 59917919 + 0.538462 NA Intergenic L1ME1|LINE|L1 228204 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 154.154-7 chr18 2585827 2586390 + 0.538462 NA intron (NM_006101, intron 7 of 16) intron (NM_006101, intron 7 of 16) 14551 NM_006101 10403 Hs.414407 NM_006101 ENSG00000080986 NDC80 HEC|HEC1|HsHec1|KNTC2|TID3|hsNDC80 NDC80 kinetochore complex component protein-coding 163.461 chr2 56715101 56715655 + 0.538462 NA Intergenic Intergenic -529608 NR_125368 100129434 Hs.580330 NR_125368 LOC100129434 - uncharacterized LOC100129434 ncRNA 164.923 chr10 57903559 57903917 + 0.538462 NA Intergenic L1MD2|LINE|L1 364156 NM_152230 253430 Hs.30280 NM_152230 ENSG00000151151 IPMK - inositol polyphosphate multikinase protein-coding 181.231-3 chr2 79470269 79470837 + 0.538462 NA Intergenic Intergenic 30291 NR_110289 101927987 Hs.574704 NR_110289 ENSG00000229385 LOC101927987 - uncharacterized LOC101927987 ncRNA 181.308-3 chr2 49696506 49697164 + 0.538462 NA Intergenic Intergenic 277368 NM_001320156 9378 Hs.637685 NM_004801 ENSG00000179915 NRXN1 Hs.22998|PTHSL2|SCZD17 neurexin 1 protein-coding 190.615-2 chr18 3281034 3281640 + 0.538462 NA Intergenic A-rich|Low_complexity|Low_complexity 18618 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding 166.615-12 chr8 48499278 48499805 + 0.538462 NA Intergenic Intergenic -52026 NR_105002 101929268 Hs.683934 NR_105002 ENSG00000253608 LOC101929268 - uncharacterized LOC101929268 ncRNA 159.615 chr10 20434829 20435515 + 0.538462 NA Intergenic Intergenic -116798 NR_039822 100616383 NR_039822 ENSG00000265372 MIR4675 - microRNA 4675 ncRNA 179.538-3 chr12 119113410 119114104 + 0.538462 NA intron (NM_194286, intron 2 of 12) intron (NM_194286, intron 2 of 12) 62727 NR_134996 105370024 Hs.679286 NR_134996 ENSG00000256884 LOC105370024 - uncharacterized LOC105370024 ncRNA 152.846-2 chr14 66695949 66696330 + 0.538462 NA intron (NM_001024218, intron 2 of 21) intron (NM_001024218, intron 2 of 21) 188732 NM_001024218 10243 Hs.208765 NM_020806 ENSG00000171723 GPHN GEPH|GPH|GPHRYN|HKPX1|MOCODC gephyrin protein-coding 180.615-2 chr21 22093053 22093424 + 0.538462 NA intron (NR_109959, intron 2 of 5) LTR16A1|LTR|ERVL 5221 NR_109959 101927843 Hs.652879 NR_109959 ENSG00000233215 LINC01687 - long intergenic non-protein coding RNA 1687 ncRNA 164.769-2 chr14 35351294 35351785 + 0.538462 NA Intergenic AluJo|SINE|Alu 53215 NM_020529 4792 Hs.81328 NM_020529 ENSG00000100906 NFKBIA EDAID2|IKBA|MAD-3|NFKBI NFKB inhibitor alpha protein-coding 169.462-4 chr3 57349396 57349792 + 0.538462 NA intron (NM_001366028, intron 60 of 73) L1PB1|LINE|L1 -56909 NM_001142733 142686 Hs.665154 NM_130387 ENSG00000239388 ASB14 - ankyrin repeat and SOCS box containing 14 protein-coding 209.154 chr1 90066773 90067250 + 0.538462 NA Intergenic Intergenic 71901 NM_181781 284695 Hs.306221 NM_181781 ENSG00000162664 ZNF326 ZAN75|ZIRD|Zfp326|dJ871E2.1 zinc finger protein 326 protein-coding 268.462 chr8 86745454 86746138 + 0.538462 NA Intergenic Intergenic -2121 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding 199.769-4 chr17 35295733 35296285 + 0.538462 NA Intergenic Intergenic 52937 NM_001330183 162394 Hs.585792 NM_144975 ENSG00000166750 SLFN5 - schlafen family member 5 protein-coding 213.231 chr11 100954011 100954661 + 0.538462 NA intron (NM_001367945, intron 14 of 25) intron (NM_001367945, intron 14 of 25) 20062 NR_145747 109616988 NR_145747 SNORD13I - small nucleolar RNA, C/D box 13I snoRNA 158.923-7 chr3 88062518 88062913 + 0.538462 NA intron (NM_001366093, intron 1 of 7) intron (NM_001366093, intron 1 of 7) 3460 NM_001366093 55279 Hs.591650 NM_018293 ENSG00000175105 ZNF654 - zinc finger protein 654 protein-coding 159.538-7 chr6 65664995 65665564 + 0.538462 NA intron (NM_001292009, intron 1 of 43) intron (NM_001292009, intron 1 of 43) 41946 NM_001292009 346007 Hs.25067 NM_198283 ENSG00000188107 EYS C6orf178|C6orf179|C6orf180|EGFL10|EGFL11|RP25|SPAM|bA166P24.2|bA307F22.3|bA74E24.1|dJ1018A4.2|dJ22I17.2|dJ303F19.1 eyes shut homolog protein-coding 181.769-2 chr18 70124884 70125357 + 0.538462 NA intron (NM_001318520, intron 24 of 47) intron (NM_001318520, intron 24 of 47) 80567 NM_173630 25914 Hs.654809 NM_173630 ENSG00000176225 RTTN MSSP rotatin protein-coding 162.461-5 chr6 80804487 80804975 + 0.538462 NA Intergenic Intergenic 698060 NR_134945 594 Hs.156414 NM_000056 ENSG00000083123 BCKDHB BCKDE1B|BCKDH E1-beta|E1B branched chain keto acid dehydrogenase E1 subunit beta protein-coding 165.923-3 chr17 63064952 63065317 + 0.538462 NA intron (NM_025185, intron 2 of 25) L1MA9|LINE|L1 98899 NM_025185 26115 Hs.410889 NM_015623 ENSG00000170921 TANC2 ROLSA|rols tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 protein-coding 189.846-4 chr4 65226474 65226972 + 0.538462 NA Intergenic MIR|SINE|MIR -222223 NR_033976 401134 Hs.165899 NR_033976 ENSG00000250125 LINC02232 - long intergenic non-protein coding RNA 2232 ncRNA 191.539 chr2 40458451 40458836 + 0.538462 NA intron (NM_001112802, intron 1 of 7) intron (NM_001112802, intron 1 of 7) -6553 NM_001351494 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 164.308-5 chr12 62613889 62614361 + 0.538462 NA Intergenic Intergenic 10439 NR_029661 406891 NR_029661 ENSG00000199179 MIRLET7I LET7I|MIRNLET7I|hsa-let-7i|let-7i microRNA let-7i ncRNA 153.538-5 chr5 66042701 66043074 + 0.538462 NA intron (NM_001253697, intron 15 of 25) intron (NM_001253697, intron 15 of 25) -97314 NR_028474 100303749 Hs.608060 NR_028474 LOC100303749 - LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene pseudo 155.846-13 chrX 100444118 100444583 + 0.538462 NA Intergenic AluSq2|SINE|Alu -34077 NM_020766 57526 Hs.4993 NM_020766 ENSG00000165194 PCDH19 EFMR|EIEE9 protocadherin 19 protein-coding 157.923-4 chr9 16646033 16646612 + 0.538462 NA intron (NM_001317940, intron 2 of 5) intron (NM_001317940, intron 2 of 5) -80492 NR_151723 111216284 Hs.609218 NR_151723 ENSG00000234779 BNC2-AS1 - BNC2 antisense RNA 1 ncRNA 176.692-2 chr12 21153074 21153875 + 0.538462 NA intron (NM_006446, intron 2 of 14) L1M5|LINE|L1 22280 NM_006446 10599 Hs.449738 NM_006446 ENSG00000134538 SLCO1B1 HBLRR|LST-1|LST1|OATP-C|OATP1B1|OATP2|OATPC|SLC21A6 solute carrier organic anion transporter family member 1B1 protein-coding 151.615-10 chr3 111304898 111305461 + 0.538462 NA Intergenic L2c|LINE|L2 233363 NM_001243286 25945 Hs.293917 NM_015480 ENSG00000177707 NECTIN3 CD113|CDW113|NECTIN-3|PPR3|PRR3|PVRL3|PVRR3 nectin cell adhesion molecule 3 protein-coding 181.615-5 chr3 73922675 73923107 + 0.538462 NA Intergenic Intergenic 113647 NR_146637 105377165 NR_146637 LINC02005 - long intergenic non-protein coding RNA 2005 ncRNA 174.615-5 chr18 34442110 34442528 + 0.538462 NA Intergenic L1MEc|LINE|L1 -50971 NM_032975 1837 Hs.643454 NM_001390 ENSG00000134769 DTNA D18S892E|DRP3|DTN|DTN-A|LVNC1 dystrobrevin alpha protein-coding 183.077 chr11 82173209 82173651 + 0.538462 NA intron (NR_120571, intron 3 of 7) MamGypLTR3a|LTR|Gypsy 230483 NR_120571 101928989 Hs.145117 NR_120571 ENSG00000245832 MIR4300HG - MIR4300 host gene ncRNA 164.538-3 chr10 43149309 43149636 + 0.538462 NA intron (NM_018590, intron 1 of 7) L1MEc|LINE|L1 -5425 NM_001319656 55454 Hs.657569 NM_018590 ENSG00000169826 CSGALNACT2 CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT chondroitin sulfate N-acetylgalactosaminyltransferase 2 protein-coding 166.308-7 chr6 21564655 21565055 + 0.538462 NA Intergenic L1MA3|LINE|L1 -28896 NM_003107 6659 Hs.643910 NM_003107 ENSG00000124766 SOX4 EVI16 SRY-box transcription factor 4 protein-coding 163.308-2 chr10 81044782 81045382 + 0.538462 NA Intergenic L1PA13|LINE|L1 395285 NR_155749 105378386 Hs.531456 NR_155749 LINC02655 - long intergenic non-protein coding RNA 2655 ncRNA 191.385 chr1 202701316 202701873 + 0.538462 NA intron (NM_177402, intron 1 of 8) Charlie1a|DNA|hAT-Charlie 8860 NM_177402 127833 Hs.25422 NM_177402 ENSG00000143858 SYT2 CMS7|MYSPC|SytII synaptotagmin 2 protein-coding 152.923-16 chr7 137371222 137371523 + 0.538462 NA Intergenic Intergenic -27639 NM_002825 5764 Hs.371249 NM_002825 ENSG00000105894 PTN HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1 pleiotrophin protein-coding 183.231-3 chr10 97124723 97125361 + 0.538462 NA intron (NM_003061, intron 4 of 36) L1ME4b|LINE|L1 22286 NR_038330 100505540 Hs.568878 NR_038330 ENSG00000234855 SLIT1-AS1 - SLIT1 antisense RNA 1 ncRNA 176.692-6 chr4 173891642 173892083 + 0.538462 NA Intergenic Intergenic -5411 NR_146487 101928478 NR_146487 ENSG00000250708 LINC02269 - long intergenic non-protein coding RNA 2269 ncRNA 199.461 chr3 148261619 148262273 + 0.538462 NA Intergenic AluSz6|SINE|Alu -18945 NR_146712 105374149 Hs.274837 NR_146712 LINC02046 - long intergenic non-protein coding RNA 2046 ncRNA 155.769-8 chr2 237088385 237088787 + 0.538462 NA intron (NM_198189, intron 3 of 8) intron (NM_198189, intron 3 of 8) 2697 NM_006710 10920 Hs.531713 NM_006710 ENSG00000198612 COPS8 COP9|CSN8|SGN8 COP9 signalosome subunit 8 protein-coding 159 chr13 108652408 108652809 + 0.538462 NA intron (NM_001198950, intron 1 of 34) L1MB2|LINE|L1 22997 NM_001198950 23026 Hs.656587 NM_015011 ENSG00000041515 MYO16 MYAP3|MYR8|Myo16b|NYAP3|PPP1R107 myosin XVI protein-coding 175-2 chr4 45353700 45354088 + 0.538462 NA Intergenic Intergenic -627260 NM_001270881 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding 199.692 chr1 36979137 36979860 + 0.538462 NA intron (NM_000831, intron 1 of 15) MLT1M|LTR|ERVL-MaLR 55017 NM_000831 2899 Hs.128848 NM_000831 ENSG00000163873 GRIK3 EAA5|GLR7|GLUR7|GluK3|GluR7a glutamate ionotropic receptor kainate type subunit 3 protein-coding 192.154 chr15 39793255 39793800 + 0.538462 NA Intergenic Intergenic 10621 NR_135665 105370941 Hs.587843 NR_135665 ENSG00000261136 LOC105370941 - uncharacterized LOC105370941 ncRNA 192.539 chr1 63763514 63764162 + 0.538462 NA Intergenic L1ME1|LINE|L1 -10179 NM_001083592 4919 Hs.128753 NM_005012 ENSG00000185483 ROR1 NTRKR1|dJ537F10.1 receptor tyrosine kinase like orphan receptor 1 protein-coding 155.769-6 chr15 70224213 70224689 + 0.538462 NA Intergenic L2a|LINE|L2 -126534 NM_001105192 7090 Hs.287362 NM_005078 ENSG00000140332 TLE3 ESG|ESG3|GRG3|HsT18976 TLE family member 3, transcriptional corepressor protein-coding 225.923-2 chr13 111220978 111221606 + 0.538462 NA intron (NM_001330597, intron 5 of 18) L1MC3|LINE|L1 18232 NM_001320853 8874 Hs.508738 NM_003899 ENSG00000102606 ARHGEF7 BETA-PIX|COOL-1|COOL1|Nbla10314|P50|P50BP|P85|P85COOL1|P85SPR|PAK3|PIXB Rho guanine nucleotide exchange factor 7 protein-coding 186.615-3 chr7 87092612 87093063 + 0.538462 NA Intergenic L1ME2|LINE|L1 -33183 NM_001142749 222223 Hs.208093 NM_152748 ENSG00000164659 KIAA1324L EIG121L KIAA1324 like protein-coding 174.385-2 chr10 111241132 111241537 + 0.538462 NA Intergenic Intergenic 127043 NR_159949 113633881 NR_159949 HEAT2 lnc-ADRA2A-1:1 HEart disease Associated Transcript 2 ncRNA 207.077-3 chr16 64187369 64188021 + 0.538462 NA Intergenic Intergenic 934368 NM_001308392 1009 Hs.116471 NM_001797 ENSG00000140937 CDH11 CAD11|CDHOB|ESWS|OB|OSF-4 cadherin 11 protein-coding 160.154-5 chr10 99889160 99889518 + 0.538462 NA intron (NM_015221, intron 11 of 16) L2a|LINE|L2 24753 NM_001318327 23268 Hs.500771 NM_015221 ENSG00000107554 DNMBP ARHGEF36|CTRCT48|TUBA dynamin binding protein protein-coding 175.539-2 chr2 75111639 75112076 + 0.538462 NA intron (NM_015727, intron 2 of 3) L1ME4b|LINE|L1 21045 NR_049796 100846995 NR_049796 ENSG00000263909 MIR5000 - microRNA 5000 ncRNA 179.846-2 chr21 27599048 27599552 + 0.538462 NA Intergenic Intergenic -123079 NR_024357 54088 Hs.570434 NR_024357 ENSG00000225298 LINC00113 C21orf23|NCRNA00113 long intergenic non-protein coding RNA 113 ncRNA 198.461 chr14 43227259 43227807 + 0.538462 NA Intergenic Intergenic 1279750 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 183.462 chr12 51520932 51521353 + 0.538462 NA Intergenic Intergenic -70091 NM_001369788 6334 Hs.436550 NM_014191 ENSG00000196876 SCN8A BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 sodium voltage-gated channel alpha subunit 8 protein-coding 157.231-5 chr2 124775756 124776137 + 0.538462 NA intron (NM_130773, intron 17 of 23) intron (NM_130773, intron 17 of 23) 750659 NM_130773 129684 Hs.660653 NM_130773 ENSG00000155052 CNTNAP5 caspr5 contactin associated protein like 5 protein-coding 176.231-6 chr7 87882598 87883096 + 0.538462 NA intron (NM_001318060, intron 2 of 10) L1MB3|LINE|L1 6354 NM_001318060 10926 Hs.485380 NM_006716 ENSG00000006634 DBF4 ASK|CHIF|DBF4A|ZDBF1 DBF4 zinc finger protein-coding 159.769-11 chr6 45225693 45226104 + 0.538462 NA intron (NM_001350325, intron 2 of 10) intron (NM_001350325, intron 2 of 10) -28128 NR_030313 693171 NR_030313 ENSG00000207769 MIR586 MIRN586|hsa-mir-586 microRNA 586 ncRNA 197.308 chr1 97186082 97186592 + 0.538462 NA intron (NM_000110, intron 20 of 22) L1PB4|LINE|L1 90414 NR_046590 100873932 Hs.682651 NR_046590 ENSG00000232878 DPYD-AS1 - DPYD antisense RNA 1 ncRNA 165.692-9 chr4 105644617 105645005 + 0.538462 NA intron (NM_001242729, intron 5 of 13) intron (NM_001242729, intron 5 of 13) 63878 NM_020395 57117 Hs.480454 NM_020395 ENSG00000138785 INTS12 INT12|PHF22|SBBI22 integrator complex subunit 12 protein-coding 172.385-6 chr5 71625207 71625540 + 0.538462 NA intron (NM_001363147, intron 6 of 15) L1ME3Cz|LINE|L1 38033 NM_022132 64087 Hs.604789 NM_022132 ENSG00000131844 MCCC2 MCCB methylcrotonoyl-CoA carboxylase 2 protein-coding 162-4 chr2 41167214 41167654 + 0.538462 NA Intergenic Intergenic -654999 NM_001112802 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 161.769 chr12 47666893 47667472 + 0.538462 NA intron (NM_024604, intron 15 of 16) intron (NM_024604, intron 15 of 16) 38848 NM_024604 79657 Hs.437855 NM_024604 ENSG00000005175 RPAP3 Tah1|hSpagh RNA polymerase II associated protein 3 protein-coding 231.615 chr2 119816428 119817120 + 0.538462 NA intron (NM_002830, intron 2 of 26) Charlie3|DNA|hAT-Charlie 56852 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding 159-3 chr16 49225450 49225958 + 0.538462 NA Intergenic Tigger2a|DNA|TcMar-Tigger 56134 NM_004352 869 Hs.458423 NM_004352 ENSG00000102924 CBLN1 - cerebellin 1 precursor protein-coding 187.385 chr1 85610525 85610914 + 0.538462 NA Intergenic Intergenic 29958 NM_001554 3491 Hs.8867 NM_001554 ENSG00000142871 CCN1 CYR61|GIG1|IGFBP10 cellular communication network factor 1 protein-coding 155-9 chr8 98700477 98700914 + 0.538462 NA intron (NM_001256313, intron 4 of 8) intron (NM_001256313, intron 4 of 8) 124976 NM_001256313 6788 Hs.492333 NM_006281 ENSG00000104375 STK3 KRS1|MST2 serine/threonine kinase 3 protein-coding 155.846-5 chr2 106174197 106174661 + 0.538462 NA intron (NM_025076, intron 1 of 14) intron (NM_025076, intron 1 of 14) 19910 NR_045607 80146 Hs.469561 NM_025076 ENSG00000115652 UXS1 SDR6E1|UGD UDP-glucuronate decarboxylase 1 protein-coding 153.923-6 chr2 35631290 35631611 + 0.538462 NA Intergenic Intergenic 160045 NR_039629 100616475 NR_039629 ENSG00000265301 MIR548AD - microRNA 548ad ncRNA 217-4 chr7 107412096 107412634 + 0.538462 NA intron (NM_181733, intron 7 of 20) intron (NM_181733, intron 7 of 20) -57692 NM_005295 2845 Hs.657277 NM_005295 ENSG00000172209 GPR22 - G protein-coupled receptor 22 protein-coding 152.923-14 chr7 126490424 126490741 + 0.538462 NA intron (NM_001371085, intron 9 of 10) intron (NM_001371085, intron 9 of 10) 567602 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA 157.462-3 chr20 54482876 54483232 + 0.538462 NA intron (NM_018431, intron 1 of 7) intron (NM_018431, intron 1 of 7) 7461 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 169.615-11 chr7 49500346 49500875 + 0.538462 NA Intergenic Intergenic -273028 NM_198570 375567 Hs.629302 NM_198570 ENSG00000188730 VWC2 PSST739|UNQ739 von Willebrand factor C domain containing 2 protein-coding 198.154-3 chr7 77442104 77442675 + 0.538462 NA Intergenic Intergenic -26040 NM_017439 54103 Hs.186649 NM_017439 ENSG00000186088 GSAP PION gamma-secretase activating protein protein-coding 176.154-6 chr3 134424087 134424664 + 0.538462 NA Intergenic Intergenic -13452 NR_039951 100616281 NR_039951 ENSG00000284561 MIR4788 - microRNA 4788 ncRNA 225.692-3 chr10 56620693 56621321 + 0.538462 NA Intergenic Intergenic -259734 NM_032997 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 171.769-4 chr5 118256189 118256515 + 0.538462 NA intron (NR_104997, intron 2 of 2) L1MC5a|LINE|L1 -26222 NR_104609 100505811 Hs.369776 NR_104609 ENSG00000250427 LINC02148 HNCAT21 long intergenic non-protein coding RNA 2148 ncRNA 184.616 chr2 170047687 170048155 + 0.538462 NA intron (NM_172070, intron 32 of 38) MER44B|DNA|TcMar-Tigger -130226 NM_138995 140469 Hs.671900 NM_138995 ENSG00000071909 MYO3B - myosin IIIB protein-coding 152.385-5 chr4 61688654 61689044 + 0.538462 NA intron (NM_001371342, intron 4 of 20) intron (NM_001371342, intron 4 of 20) 472916 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 170.154-5 chr5 117547961 117548560 + 0.538462 NA intron (NR_046089, intron 4 of 5) intron (NR_046089, intron 4 of 5) 132748 NR_046089 728342 Hs.434420 NR_046089 LINC00992 - long intergenic non-protein coding RNA 992 ncRNA 184.385-3 chr2 113721395 113721890 + 0.538462 NA promoter-TSS (NR_039943) promoter-TSS (NR_039943) -274 NR_039943 100616208 NR_039943 ENSG00000265429 MIR4782 - microRNA 4782 ncRNA 184.462 chr20 24840784 24841245 + 0.538462 NA Intergenic L1PA16|LINE|L1 -108255 NM_003650 8530 Hs.143212 NM_003650 ENSG00000077984 CST7 CMAP cystatin F protein-coding 160-6 chr5 153447026 153447611 + 0.538462 NA Intergenic Intergenic -43206 NM_001258019 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding 193.077-2 chr5 39247259 39247778 + 0.538462 NA intron (NM_001243093, intron 1 of 18) intron (NM_001243093, intron 1 of 18) 23131 NM_001243093 2533 Hs.370503 NM_001465 ENSG00000082074 FYB1 ADAP|FYB|PRO0823|SLAP-130|SLAP130|THC3 FYN binding protein 1 protein-coding 169.846-3 chr11 46782670 46783043 + 0.538462 NA intron (NM_001008938, intron 18 of 43) intron (NM_001008938, intron 18 of 43) -20357 NR_003056 692108 Hs.693252 NR_003056 ENSG00000212135 SNORD67 HBII-166 small nucleolar RNA, C/D box 67 snoRNA 197-2 chr3 104359800 104360427 + 0.538462 NA Intergenic Intergenic -835997 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 171.385-2 chr14 43873816 43874352 + 0.538462 NA Intergenic Intergenic 633199 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 218.308-2 chr3 96028232 96028924 + 0.538462 NA Intergenic Intergenic -331386 NR_107027 102465864 NR_107027 ENSG00000278103 MIR8060 hsa-mir-8060 microRNA 8060 ncRNA 197.385-4 chr15 76432716 76433288 + 0.538462 NA intron (NR_148227, intron 27 of 32) intron (NR_148227, intron 27 of 32) 96229 NM_145805 64843 Hs.444677 NM_145805 ENSG00000159556 ISL2 - ISL LIM homeobox 2 protein-coding 168.154-2 chr11 43398058 43398494 + 0.538462 NA intron (NM_001307943, intron 8 of 19) intron (NM_001307943, intron 8 of 19) 39356 NM_018259 55761 Hs.191186 NM_018259 ENSG00000052841 TTC17 - tetratricopeptide repeat domain 17 protein-coding 155.231-11 chr7 1334456 1334766 + 0.538462 NA Intergenic L1MB5|LINE|L1 101739 NM_001080461 340260 NM_001080461 ENSG00000164853 UNCX UNCX4.1 UNC homeobox protein-coding 164-10 chr6 143111562 143112235 + 0.538462 NA intron (NM_001366344, intron 2 of 6) L2|LINE|L2 -14241 NM_001366358 51390 Hs.567501 NM_016108 ENSG00000146416 AIG1 AIG-1|dJ95L4.1 androgen induced 1 protein-coding 157.846-7 chr12 34694554 34695066 + 0.538462 NA Intergenic ALR/Alpha|Satellite|centr 672314 NM_032834 84920 Hs.102971 NM_032834 ENSG00000139133 ALG10 ALG10A|DIE2|KCR1 ALG10 alpha-1,2-glucosyltransferase protein-coding 221.923-2 chr20 54764753 54765530 + 0.538462 NA Intergenic Intergenic 289548 NM_001294161 55816 Hs.473133 NM_018431 ENSG00000101134 DOK5 C20orf180|IRS-6|IRS6 docking protein 5 protein-coding 152.538 chr14 66965456 66965829 + 0.538462 NA intron (NM_001024218, intron 8 of 21) intron (NM_001024218, intron 8 of 21) -223798 NM_173526 161142 Hs.412818 NM_173526 ENSG00000172717 FAM71D C14orf54 family with sequence similarity 71 member D protein-coding 174.308-5 chr2 100030295 100030710 + 0.538462 NA intron (NM_001025108, intron 2 of 23) L1MC3|LINE|L1 75081 NM_001025108 3899 Hs.444414 NM_002285 ENSG00000144218 AFF3 LAF4|MLLT2-like AF4/FMR2 family member 3 protein-coding 175.385-2 chr16 84636510 84637054 + 0.538462 NA Intergenic AluY|SINE|Alu -11729 NM_024731 79786 Hs.222731 NM_024731 ENSG00000135686 KLHL36 C16orf44 kelch like family member 36 protein-coding 199.615-6 chr8 134607027 134607588 + 0.538462 NA intron (NM_020863, intron 5 of 15) intron (NM_020863, intron 5 of 15) 9236 NR_002438 594840 Hs.626298 NR_002438 ENSG00000248492 ZFAT-AS1 NCRNA00070|SAS-ZFAT|ZFAT-AS|ZFATAS ZFAT antisense RNA 1 ncRNA 160.615-16 chr8 81068347 81068862 + 0.538462 NA intron (NM_018440, intron 2 of 8) intron (NM_018440, intron 2 of 8) 43464 NM_018440 55824 Hs.266175 NM_018440 ENSG00000076641 PAG1 CBP|PAG phosphoprotein membrane anchor with glycosphingolipid microdomains 1 protein-coding 162-11 chr5 153475165 153475559 + 0.538462 NA Intergenic L1MC5|LINE|L1 -15162 NM_001258019 2890 Hs.519693 NM_000827 ENSG00000155511 GRIA1 GLUH1|GLUR1|GLURA|GluA1|HBGR1 glutamate ionotropic receptor AMPA type subunit 1 protein-coding 162.923-2 chr2 24118590 24118930 + 0.538462 NA intron (NM_199346, intron 4 of 4) L2b|LINE|L2 4574 NM_199346 375189 Hs.442718 NM_199346 ENSG00000176732 PFN4 - profilin family member 4 protein-coding 239.308 chr10 101520998 101521604 + 0.538462 NA intron (NM_001256856, intron 3 of 13) intron (NM_001256856, intron 3 of 13) 66956 NM_001174084 27343 Hs.523230 NM_013274 ENSG00000166169 POLL BETAN|POLKAPPA DNA polymerase lambda protein-coding 156.692-5 chr14 78333403 78333829 + 0.538462 NA intron (NR_073547, intron 4 of 20) L2a|LINE|L2 -70103 NM_004796 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 182.077-4 chr3 29810383 29810939 + 0.538462 NA intron (NM_001003792, intron 6 of 13) intron (NM_001003792, intron 6 of 13) 123495 NR_046556 100873977 Hs.581453 NR_046556 ENSG00000235593 RBMS3-AS1 - RBMS3 antisense RNA 1 ncRNA 162.692-11 chrX 151635440 151635803 + 0.538462 NA intron (NM_173493, intron 8 of 15) L1MC4a|LINE|L1 -59637 NM_024082 79057 Hs.209253 NM_024082 ENSG00000130032 PRRG3 PRGP3|TMG3 proline rich and Gla domain 3 protein-coding 193.846-3 chr3 35102768 35103455 + 0.538462 NA intron (NR_110817, intron 2 of 3) intron (NR_110817, intron 2 of 3) 290912 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 157.308-3 chr14 21911603 21912151 + 0.538462 NA Intergenic L2a|LINE|L2 -240860 NM_001317107 26687 NM_001317107 ENSG00000276240 OR4E1 OR4E1P olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) protein-coding 159.385-3 chr5 25804050 25804557 + 0.538462 NA Intergenic L1PA15|LINE|L1 613350 NR_136209 105374693 Hs.628714 NR_136209 LINC02211 - long intergenic non-protein coding RNA 2211 ncRNA 187.923-6 chr20 47508836 47509417 + 0.538462 NA intron (NM_181659, intron 1 of 22) AluJb|SINE|Alu 7239 NM_006534 8202 Hs.592142 NM_006534 ENSG00000124151 NCOA3 ACTR|AIB-1|AIB1|CAGH16|CTG26|KAT13B|RAC3|SRC-3|SRC3|TNRC14|TNRC16|TRAM-1|bHLHe42|pCIP nuclear receptor coactivator 3 protein-coding 154.231-6 chr5 30525311 30525785 + 0.538462 NA Intergenic Intergenic 644988 NR_134264 105374704 Hs.151157 NR_134264 LOC105374704 - uncharacterized LOC105374704 ncRNA 183.231-7 chr3 164904309 164904705 + 0.538462 NA Intergenic L1M3d|LINE|L1 -73027 NR_126405 104355289 Hs.574909 NR_126405 ENSG00000241767 LINC01324 - long intergenic non-protein coding RNA 1324 ncRNA 169.769-2 chr11 20580591 20581231 + 0.538462 NA Intergenic Intergenic -18489 NM_004211 9152 Hs.136557 NM_004211 ENSG00000165970 SLC6A5 GLYT-2|GLYT2|HKPX3|NET1 solute carrier family 6 member 5 protein-coding 155.462 chr11 130664594 130664916 + 0.538462 NA Intergenic Intergenic -1980 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA 205.615-2 chr3 161947404 161947988 + 0.538462 NA Intergenic L1MB7|LINE|L1 450888 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding 153-2 chr2 30777862 30778387 + 0.538462 NA intron (NM_144575, intron 2 of 22) intron (NM_144575, intron 2 of 22) 29322 NM_144575 92291 Hs.660911 NM_144575 ENSG00000162949 CAPN13 - calpain 13 protein-coding 161.462-2 chr3 22541168 22541634 + 0.538462 NA Intergenic (TA)n|Simple_repeat|Simple_repeat 584262 NR_046876 100874221 Hs.160616 NR_046876 ENSG00000223351 ZNF385D-AS2 - ZNF385D antisense RNA 2 ncRNA 176.923-6 chr21 24651308 24651817 + 0.538462 NA Intergenic Intergenic -188988 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA 181.692-5 chr3 187376755 187377124 + 0.538462 NA Intergenic ERV3-16A3_I-int|LTR|ERVL 8554 NM_022147 64108 Hs.43388 NM_022147 ENSG00000136514 RTP4 IFRG28|Z3CXXC4 receptor transporter protein 4 protein-coding 151.923-7 chr8 102230935 102231389 + 0.538462 NA intron (NM_001172478, intron 1 of 7) intron (NM_001172478, intron 1 of 7) 7669 NM_001172477 50484 Hs.512592 NM_015713 ENSG00000048392 RRM2B MTDPS8A|MTDPS8B|P53R2 ribonucleotide reductase regulatory TP53 inducible subunit M2B protein-coding 170.231-2 chr1 195603310 195603852 + 0.538462 NA Intergenic L1MA2|LINE|L1 485134 NR_146895 105371673 NR_146895 LINC01724 - long intergenic non-protein coding RNA 1724 ncRNA 169.385-6 chr7 21090854 21091437 + 0.538462 NA Intergenic Intergenic 255714 NR_126381 104355138 Hs.650722 NR_126381 ENSG00000232790 LINC01162 - long intergenic non-protein coding RNA 1162 ncRNA 165.538 chr14 43850610 43851178 + 0.538462 NA Intergenic L1MA7|LINE|L1 656389 NM_032135 84075 Hs.307086 NM_032135 ENSG00000189139 FSCB C14orf155 fibrous sheath CABYR binding protein protein-coding 167.077-8 chr5 23458063 23458431 + 0.538462 NA Intergenic Intergenic -49362 NM_020227 56979 Hs.283096 NM_020227 ENSG00000164256 PRDM9 KMT8B|MEISETZ|MSBP3|PFM6|ZNF899 PR/SET domain 9 protein-coding 154.615-12 chr7 12039834 12040383 + 0.538462 NA Intergenic MLT1A1|LTR|ERVL-MaLR -171186 NM_001134232 54664 Hs.396358 NM_018374 ENSG00000106460 TMEM106B HLD16 transmembrane protein 106B protein-coding 168.769-7 chr2 27959084 27959525 + 0.538462 NA intron (NM_199193, intron 4 of 13) intron (NM_199193, intron 4 of 13) -37063 NR_036230 100422965 NR_036230 ENSG00000265321 MIR4263 - microRNA 4263 ncRNA 193.231-7 chr7 51881059 51881536 + 0.538462 NA Intergenic Intergenic -488041 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA 180.538 chr1 70297802 70298347 + 0.538462 NA intron (NM_030816, intron 7 of 12) Tigger16b|DNA|TcMar-Tigger 56648 NM_030816 81573 Hs.744989 NM_030816 ENSG00000118454 ANKRD13C dJ677H15.3 ankyrin repeat domain 13C protein-coding 165.538-2 chr2 71105402 71105915 + 0.538462 NA Intergenic MSTB1|LTR|ERVL-MaLR 24571 NM_032601 84693 Hs.94949 NM_032601 ENSG00000124370 MCEE GLOD2 methylmalonyl-CoA epimerase protein-coding 175.385-4 chr7 74227745 74228165 + 0.538462 NA intron (NM_032463, intron 13 of 13) AluSq2|SINE|Alu 17949 NM_032463 7462 Hs.741249 NM_014146 ENSG00000086730 LAT2 HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 linker for activation of T cells family member 2 protein-coding 159.769-5 chr2 21389926 21390674 + 0.538462 NA Intergenic L1MC4|LINE|L1 266314 NM_001306137 100129278 Hs.651096 NM_001306137 ENSG00000218819 TDRD15 - tudor domain containing 15 protein-coding 158-4 chr11 123699885 123700479 + 0.538462 NA Intergenic L1ME4c|LINE|L1 30803 NM_001301819 7753 Hs.112556 NM_003455 ENSG00000166261 ZNF202 ZKSCAN10|ZSCAN42 zinc finger protein 202 protein-coding 202.538-2 chr22 28963034 28963619 + 0.538462 NA intron (NM_032173, intron 1 of 8) intron (NM_032173, intron 1 of 8) 45937 NM_032173 84133 Hs.604200 NM_032173 ENSG00000183579 ZNRF3 BK747E2.3|RNF203 zinc and ring finger 3 protein-coding 156.769-9 chr5 156106970 156107485 + 0.538462 NA Intergenic Intergenic -219530 NM_000337 6444 Hs.387207 NM_000337 ENSG00000170624 SGCD 35DAG|CMD1L|DAGD|LGMDR6|SG-delta|SGCDP|SGD sarcoglycan delta protein-coding 158.692-4 chr2 166306120 166306475 + 0.538462 NA intron (NM_001365536, intron 4 of 26) intron (NM_001365536, intron 4 of 26) 69647 NM_001365536 6335 Hs.439145 NM_002977 ENSG00000169432 SCN9A ETHA|FEB3B|GEFSP7|HSAN2D|NE-NA|NENA|Nav1.7|PN1|SFNP sodium voltage-gated channel alpha subunit 9 protein-coding 181.769 chr12 85988730 85989134 + 0.538462 NA intron (NM_001351284, intron 4 of 5) intron (NM_001351284, intron 4 of 5) 114637 NM_006183 4922 Hs.80962 NM_006183 ENSG00000133636 NTS NMN-125|NN|NT|NT/N|NTS1 neurotensin protein-coding 153-9 chr6 54701185 54701563 + 0.538462 NA Intergenic Intergenic -145397 NM_001010872 222584 Hs.152423 NM_001010872 ENSG00000168143 FAM83B C6orf143 family with sequence similarity 83 member B protein-coding 181.462-2 chr15 96279419 96279940 + 0.538462 NA intron (NR_102743, intron 5 of 7) intron (NR_102743, intron 5 of 7) -46367 NM_001145155 7026 Hs.347991 NM_021005 ENSG00000185551 NR2F2 ARP-1|ARP1|CHTD4|COUPTF2|COUPTFB|COUPTFII|NF-E3|SVP40|TFCOUP2 nuclear receptor subfamily 2 group F member 2 protein-coding 176-5 chr6 63014351 63014754 + 0.538462 NA Intergenic LTR16D1|LTR|ERVL 305425 NM_001143940 51557 Hs.149585 NM_016571 ENSG00000146166 LGSN GLULD1|LGS lengsin, lens protein with glutamine synthetase domain protein-coding 157.462-5 chr3 69953401 69953767 + 0.538462 NA intron (NM_198178, intron 6 of 8) (TGTA)n|Simple_repeat|Simple_repeat 16984 NM_000248 4286 Hs.166017 NM_000248 ENSG00000187098 MITF CMM8|COMMAD|MI|WS2|WS2A|bHLHe32 melanocyte inducing transcription factor protein-coding 151.846-8 chr5 3146353 3146660 + 0.538462 NA Intergenic L1MD1|LINE|L1 -31329 NR_104617 102467074 Hs.575250 NR_104617 ENSG00000249808 LINC01377 - long intergenic non-protein coding RNA 1377 ncRNA 159.154-4 chr13 37071166 37071625 + 0.538462 NA Intergenic Intergenic -11682 NM_001278480 55578 Hs.435815 NM_017569 ENSG00000102710 SUPT20H C13|C13orf19|FAM48A|FP757|P38IP|SPT20 SPT20 homolog, SAGA complex component protein-coding 173.846-7 chr5 25063524 25064040 + 0.538462 NA Intergenic Intergenic 126874 NR_147006 105374694 NR_147006 ENSG00000251273 LINC02228 - long intergenic non-protein coding RNA 2228 ncRNA 176.231 chr10 16032283 16032801 + 0.538462 NA Intergenic Intergenic -172009 NM_001318330 80013 Hs.158870 NM_024948 ENSG00000148481 MINDY3 C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042 MINDY lysine 48 deubiquitinase 3 protein-coding 223 chr2 159464822 159465543 + 0.538462 NA intron (NM_001329858, intron 3 of 36) MLT1B|LTR|ERVL-MaLR -150112 NR_110587 643072 Hs.632541 NR_110587 LOC643072 - uncharacterized LOC643072 ncRNA 198.385 chr16 89541280 89541719 + 0.538462 NA intron (NM_001363850, intron 9 of 17) intron (NM_001363850, intron 9 of 17) -19158 NM_001243131 6137 Hs.410817 NM_000977 ENSG00000167526 RPL13 BBC1|D16S444E|D16S44E|L13 ribosomal protein L13 protein-coding 151.615-8 chr3 41456423 41456795 + 0.538462 NA intron (NR_136342, intron 31 of 34) intron (NR_136342, intron 31 of 34) 257104 NM_001098210 1499 Hs.476018 NM_001904 ENSG00000168036 CTNNB1 CTNNB|EVR7|MRD19|NEDSDV|armadillo catenin beta 1 protein-coding 153.538 chr17 33068949 33069402 + 0.538462 NA intron (NM_183377, intron 3 of 9) L1MEc|LINE|L1 76324 NM_001317225 124912 Hs.434112 NM_173847 ENSG00000141316 SPACA3 ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1 sperm acrosome associated 3 protein-coding 169.923 chr14 67322535 67323106 + 0.538462 NA intron (NM_001256550, intron 13 of 14) intron (NM_001256550, intron 13 of 14) 36984 NM_015994 51382 Hs.272630 NM_015994 ENSG00000100554 ATP6V1D ATP6M|VATD|VMA8 ATPase H+ transporting V1 subunit D protein-coding 152.077-9 chr4 177620414 177620882 + 0.538462 NA Intergenic Tigger3b|DNA|TcMar-Tigger -108109 NR_028342 285501 Hs.722466 NM_001085490 ENSG00000231171 LINC01098 - long intergenic non-protein coding RNA 1098 ncRNA 158.231-6 chr2 15661178 15661561 + 0.538462 NA Intergenic Intergenic -29413 NR_110201 101926966 Hs.502835 NR_110201 ENSG00000231031 LINC01804 - long intergenic non-protein coding RNA 1804 ncRNA 163.231-9 chr7 29840709 29841151 + 0.538462 NA intron (NM_001080529, intron 2 of 8) MER31A|LTR|ERV1 34376 NM_001080529 644150 Hs.380698 NM_001080529 ENSG00000122574 WIPF3 CR16 WAS/WASL interacting protein family member 3 protein-coding 174.769-6 chr3 102553350 102553880 + 0.538462 NA Intergenic MSTD|LTR|ERVL-MaLR 118600 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 157-4 chr12 33702611 33703032 + 0.538462 NA Intergenic L1ME3|LINE|L1 -263002 NM_198992 341359 Hs.118703 NM_198992 ENSG00000110975 SYT10 - synaptotagmin 10 protein-coding 183.231-11 chr9 2757411 2757851 + 0.538462 NA Intergenic LTR49|LTR|ERV1 40121 NM_133497 169522 Hs.622675 NM_133497 ENSG00000168263 KCNV2 KV11.1|Kv8.2|RCD3B potassium voltage-gated channel modifier subfamily V member 2 protein-coding 191.461 chr2 5203915 5204505 + 0.538462 NA Intergenic Intergenic 486908 NR_110580 102723818 Hs.128107 NR_110580 LINC01248 - long intergenic non-protein coding RNA 1248 ncRNA 152.154-4 chr17 70052424 70053031 + 0.538462 NA intron (NR_104130, intron 1 of 1) L1MC1|LINE|L1 1456 NR_104129 101928141 Hs.639899 NR_104129 ENSG00000267603 LINC01028 TCONS_00025127 long intergenic non-protein coding RNA 1028 ncRNA 189.692-3 chr7 120523019 120523597 + 0.538462 NA intron (NM_012281, intron 1 of 5) intron (NM_012281, intron 1 of 5) 250133 NM_012281 3751 Hs.654739 NM_012281 ENSG00000184408 KCND2 KV4.2|RK5 potassium voltage-gated channel subfamily D member 2 protein-coding 193.077 chr3 18966580 18967076 + 0.538462 NA Intergenic MIRb|SINE|MIR -181682 NM_144633 131096 Hs.475656 NM_144633 ENSG00000183960 KCNH8 ELK|ELK1|Kv12.1|elk3 potassium voltage-gated channel subfamily H member 8 protein-coding 167.846-2 chr10 113885184 113885507 + 0.538462 NA intron (NM_198514, intron 5 of 10) intron (NM_198514, intron 5 of 10) 30684 NM_198514 374354 Hs.369924 NM_198514 ENSG00000196865 NHLRC2 FINCA NHL repeat containing 2 protein-coding 158.385 chr19 32347948 32348362 + 0.538462 NA intron (NM_001136156, intron 2 of 6) MIR3|SINE|MIR 2545 NM_001136156 22847 Hs.205392 NM_014910 ENSG00000168813 ZNF507 - zinc finger protein 507 protein-coding 159.846-5 chr2 123119934 123120392 + 0.538462 NA Intergenic L1PA16|LINE|L1 -46682 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 197.769-3 chr14 69007763 69008293 + 0.538462 NA Intergenic Intergenic 28346 NR_073422 161159 Hs.603341 NR_073422 ENSG00000259062 ACTN1-AS1 C14orf84 ACTN1 antisense RNA 1 ncRNA 197.385-2 chr14 40399552 40400149 + 0.538462 NA Intergenic Intergenic -554861 NR_109758 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 169.769-4 chr2 137766263 137766745 + 0.538462 NA Intergenic HAL1b|LINE|L1 161428 NR_120402 101928273 Hs.560928 NR_120402 LOC101928273 - uncharacterized LOC101928273 ncRNA 223.769-2 chr14 88491580 88492209 + 0.538462 NA intron (NM_007039, intron 10 of 18) intron (NM_007039, intron 10 of 18) 63113 NM_007039 11099 Hs.437040 NM_007039 ENSG00000070778 PTPN21 PTPD1|PTPRL10 protein tyrosine phosphatase non-receptor type 21 protein-coding 155.385-6 chr17_GL000205v2_random 19257 19566 + 0.538462 NA Intergenic CER|Satellite|Satellite 38555 NR_003682 403340 Hs.572501 NR_003682 MGC70870 - C-terminal binding protein 2 pseudogene pseudo 184.077-3 chr20 31054925 31055609 + 0.538462 NA Intergenic (TGGAA)n|Simple_repeat|Simple_repeat -202397 NM_001037730 245929 Hs.580793 NM_001037730 ENSG00000215547 DEFB115 DEFB-15 defensin beta 115 protein-coding 167.769-4 chr3 16368315 16368673 + 0.538462 NA intron (NM_015150, intron 6 of 9) AluY|SINE|Alu 103282 NM_138381 92106 Hs.655449 NM_138381 ENSG00000154814 OXNAD1 - oxidoreductase NAD binding domain containing 1 protein-coding 157.923 chr10 67425262 67425700 + 0.538462 NA intron (NM_001127384, intron 5 of 17) intron (NM_001127384, intron 5 of 17) -22071 NR_106973 102466814 NR_106973 ENSG00000276866 MIR7151 hsa-mir-7151 microRNA 7151 ncRNA 171.461 chr1 59873950 59874593 + 0.538462 NA 3' UTR (NM_015888, exon 22 of 22) 3' UTR (NM_015888, exon 22 of 22) 52502 NM_000775 1573 Hs.152096 NM_000775 ENSG00000134716 CYP2J2 CPJ2|CYPIIJ2 cytochrome P450 family 2 subfamily J member 2 protein-coding 206.462-4 chr8 74314223 74314798 + 0.538462 NA intron (NM_020647, intron 2 of 5) intron (NM_020647, intron 2 of 5) 6851 NM_001363051 56704 Hs.657367 NM_020647 ENSG00000104369 JPH1 CMT2K|JP-1|JP1 junctophilin 1 protein-coding 176.154-3 chr11 87639551 87640051 + 0.538462 NA Intergenic Intergenic 79610 NR_135090 105369423 Hs.125442 NR_135090 ENSG00000255183 LINC02711 - long intergenic non-protein coding RNA 2711 ncRNA 153.692-10 chr6 122219164 122219537 + 0.538462 NA Intergenic Intergenic -180201 NM_001135564 3298 Hs.158195 NM_004506 ENSG00000025156 HSF2 HSF 2|HSTF 2 heat shock transcription factor 2 protein-coding 155.539-2 chr2 181817063 181817549 + 0.538462 NA Intergenic Intergenic -74424 NM_006751 6744 Hs.196983 NM_006751 ENSG00000138434 ITPRID2 CS-1|CS1|KRAP|SPAG13|SSFA2 ITPR interacting domain containing 2 protein-coding 178.923 chr10 31255469 31255814 + 0.538462 NA intron (NR_134478, intron 1 of 2) L1ME3Cz|LINE|L1 -62776 NM_001323643 6935 Hs.124503 NM_030751 ENSG00000148516 ZEB1 AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A zinc finger E-box binding homeobox 1 protein-coding 153.077-3 chr2 149389575 149390275 + 0.538462 NA intron (NM_194317, intron 1 of 4) intron (NM_194317, intron 1 of 4) 59338 NM_194317 130574 Hs.21929 NM_194317 ENSG00000187123 LYPD6 - LY6/PLAUR domain containing 6 protein-coding 171.461-3 chr18 46079713 46080197 + 0.538462 NA TTS (NM_004046) TTS (NM_004046) -7695 NM_024430 9050 Hs.567384 NM_024430 ENSG00000152229 PSTPIP2 MAYP proline-serine-threonine phosphatase interacting protein 2 protein-coding 167.923-3 chr4 35930982 35931467 + 0.538462 NA Intergenic L1MA7|LINE|L1 312715 NR_146893 116984 Hs.479451 NM_015230 ENSG00000047365 ARAP2 CENTD1|PARX ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein-coding 180.231-2 chr10 115644757 115645494 + 0.538462 NA intron (NM_207303, intron 26 of 28) MamGypsy2-I|LTR|Gypsy 549664 NR_145811 109623470 NR_145811 SNORD158 - small nucleolar RNA, C/D box 158 snoRNA 166.923-6 chr6 119895331 119895862 + 0.538462 NA Intergenic Intergenic -119583 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA 161.308-8 chr2 57190278 57190816 + 0.538462 NA Intergenic Intergenic -717104 NM_001288838 7444 Hs.715298 NM_006296 ENSG00000028116 VRK2 - VRK serine/threonine kinase 2 protein-coding 203.308 chr10 35030659 35031222 + 0.538462 NA intron (NM_003591, intron 14 of 20) intron (NM_003591, intron 14 of 20) 43343 NM_001324376 8453 Hs.82919 NM_003591 ENSG00000108094 CUL2 - cullin 2 protein-coding 186.385-3 chr1 181967598 181968144 + 0.538462 NA Intergenic L1MA6|LINE|L1 93841 NM_001009992 127665 Hs.684328 NM_001009992 ENSG00000179930 ZNF648 - zinc finger protein 648 protein-coding 172.615-7 chr21 26902393 26902929 + 0.538462 NA Intergenic Intergenic -51300 NR_039916 100616243 NR_039916 ENSG00000266133 MIR4759 - microRNA 4759 ncRNA 190-3 chr11 130653669 130654289 + 0.538462 NA Intergenic Intergenic -12756 NR_107019 102466873 NR_107019 ENSG00000274999 MIR8052 hsa-mir-8052 microRNA 8052 ncRNA 197.923 chr12 40476283 40476741 + 0.538462 NA intron (NM_173600, intron 55 of 173) intron (NM_173600, intron 55 of 173) 83118 NM_173600 283463 Hs.632712 NM_173600 MUC19 MUC-19 mucin 19, oligomeric protein-coding 162.077 chr1 235058134 235058524 + 0.538462 NA Intergenic MIR|SINE|MIR 11489 NR_027454 731656 Hs.702477 NR_027454 LINC01348 - long intergenic non-protein coding RNA 1348 ncRNA 154.538-3 chr18 5777092 5777478 + 0.538462 NA intron (NR_038839, intron 3 of 4) L1MB7|LINE|L1 28466 NR_038839 645355 Hs.632356 NR_038839 ENSG00000261738 MIR3976HG LINC01469 MIR3976 host gene ncRNA 184.154-8 chr7 94198987 94199538 + 0.538462 NA Intergenic L1MC5a|LINE|L1 192930 NR_147206 101927525 Hs.571263 NR_147206 COL1A2-AS1 TCONS_00013888|lncRNA8975-1 COL1A2 antisense RNA 1 ncRNA 157.154-6 chr4 97922768 97923441 + 0.538462 NA intron (NM_174952, intron 8 of 10) LTR12C|LTR|ERV1 220372 NM_174952 285555 Hs.680226 NM_174952 ENSG00000163116 STPG2 C4orf37 sperm tail PG-rich repeat containing 2 protein-coding 182.462-4 chr3 99541121 99541621 + 0.538462 NA Intergenic Intergenic -97223 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding 168.077-5 chr3 59516709 59517088 + 0.538462 NA Intergenic Intergenic 141599 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 216.692 chr8 138267506 138268298 + 0.538462 NA intron (NM_015912, intron 3 of 19) intron (NM_015912, intron 3 of 19) -184357 NR_161374 401478 Hs.654931 NM_001354876 LOC401478 - uncharacterized LOC401478 ncRNA 153.154-7 chr8 37442777 37443066 + 0.538462 NA intron (NR_121620, intron 3 of 6) AluJb|SINE|Alu 50992 NR_121620 100507420 Hs.105962 NR_121620 LINC01605 LincDUSP long intergenic non-protein coding RNA 1605 ncRNA 201.923-4 chr17 55614743 55615137 + 0.538462 NA Intergenic L1M5|LINE|L1 107924 NM_018286 55273 Hs.173233 NM_018286 ENSG00000166292 TMEM100 - transmembrane protein 100 protein-coding 162.846-2 chr12 27056944 27057368 + 0.538462 NA Intergenic HSMAR2|DNA|TcMar-Mariner 25366 NM_001080406 728858 Hs.334003 NM_001080406 ENSG00000214700 C12orf71 - chromosome 12 open reading frame 71 protein-coding 164.923-5 chr20 55431830 55432287 + 0.538462 NA Intergenic Intergenic -4861 NR_110064 101927796 Hs.737040 NR_110064 ENSG00000224008 LINC01441 - long intergenic non-protein coding RNA 1441 ncRNA 152.077-3 chr13 73947724 73948214 + 0.538462 NA intron (NM_007249, intron 2 of 7) intron (NM_007249, intron 2 of 7) 185960 NM_007249 11278 Hs.373857 NM_007249 ENSG00000118922 KLF12 AP-2rep|AP2REP|HSPC122 Kruppel like factor 12 protein-coding 152.692-3 chr2 188760442 188760868 + 0.538462 NA intron (NR_161166, intron 1 of 1) intron (NR_161166, intron 1 of 1) 29468 NR_161166 116093 Hs.470892 NM_052952 ENSG00000174325 DIRC1 - disrupted in renal carcinoma 1 ncRNA 156.231-5 chr6 27289141 27289549 + 0.538462 NA Intergenic L2a|LINE|L2 22887 NM_033482 94026 Hs.729955 NM_033482 ENSG00000158553 POM121L2 POM121-L|POM121L POM121 transmembrane nucleoporin like 2 protein-coding 161-2 chr11 81463133 81463626 + 0.538462 NA Intergenic Intergenic 427457 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 160.923-5 chr6 134994621 134995062 + 0.538462 NA intron (NM_006620, intron 7 of 17) intron (NM_006620, intron 7 of 17) -15409 NR_037435 100500880 NR_037435 ENSG00000283409 MIR3662 mir-3662 microRNA 3662 ncRNA 193 chr14 61871687 61872351 + 0.538462 NA intron (NM_001367656, intron 1 of 7) MIRb|SINE|MIR -55676 NM_001367663 83851 Hs.404139 NM_031914 ENSG00000139973 SYT16 CHR14SYT|SYT14L|Strep14|syt14r synaptotagmin 16 protein-coding 156.846-2 chr4 63262484 63262852 + 0.538462 NA Intergenic AluSx1|SINE|Alu -1100903 NR_110595 101927186 Hs.723269 NR_110595 ADGRL3-AS1 LPHN3-AS1 adhesion G protein-coupled receptor L3 antisense RNA 1 ncRNA 160 chr1 152314937 152315420 + 0.538462 NA intron (NR_103778, intron 2 of 6) intron (NR_103778, intron 2 of 6) 1719 NR_103778 339400 Hs.23783 NR_103778 ENSG00000237975 FLG-AS1 - FLG antisense RNA 1 ncRNA 187.923 chr1 66251860 66252311 + 0.538462 NA intron (NM_001037340, intron 2 of 14) L2|LINE|L2 -80023 NM_001037339 5142 Hs.198072 NM_002600 ENSG00000184588 PDE4B DPDE4|PDEIVB phosphodiesterase 4B protein-coding 165.231-15 chr6 126258542 126259054 + 0.538462 NA Intergenic L1M2|LINE|L1 -80991 NM_001012507 387103 Hs.486401 NM_001012507 ENSG00000203760 CENPW C6orf173|CENP-W|CUG2 centromere protein W protein-coding 153-6 chr22 47476371 47476877 + 0.538462 NA intron (NR_109967, intron 1 of 2) L1MB7|LINE|L1 10487 NR_109967 101927722 Hs.589927 NR_109967 ENSG00000218357 LINC01644 LL22NC03-75H12.2 long intergenic non-protein coding RNA 1644 ncRNA 212.538 chr3 194738458 194739362 + 0.538462 NA intron (NR_037891, intron 1 of 3) L2b|LINE|L2 29799 NR_146990 105374293 NR_146990 ENSG00000230401 LINC01972 - long intergenic non-protein coding RNA 1972 ncRNA 182.462-5 chr4 45376879 45377348 + 0.538462 NA Intergenic L1MB4|LINE|L1 -650479 NM_001270881 132789 Hs.21398 NM_138335 ENSG00000163281 GNPDA2 GNP2|SB52 glucosamine-6-phosphate deaminase 2 protein-coding 152.615-2 chr16 50161854 50162345 + 0.538462 NA intron (NM_001365324, intron 1 of 11) L1MD2|LINE|L1 8618 NM_001365324 64282 Hs.514342 NM_022447 ENSG00000121274 TENT4B PAPD5|TRF4-2|TUT3 terminal nucleotidyltransferase 4B protein-coding 157.846-8 chr2 64552132 64552515 + 0.538462 NA exon (NM_203437, exon 2 of 10) exon (NM_203437, exon 2 of 10) 26810 NR_039633 100616419 NR_039633 ENSG00000283204 MIR4434 - microRNA 4434 ncRNA 170.846-4 chr2 17412718 17413282 + 0.538462 NA Intergenic MIRb|SINE|MIR 105440 NM_001099218 729475 Hs.515802 NM_001099218 ENSG00000214842 RAD51AP2 - RAD51 associated protein 2 protein-coding 192 chr1 233851624 233852233 + 0.538462 NA Intergenic Intergenic -52748 NM_173508 148641 Hs.158748 NM_173508 ENSG00000183780 SLC35F3 - solute carrier family 35 member F3 protein-coding 161.308-3 chr13 56564540 56565016 + 0.538462 NA Intergenic Intergenic -576140 NM_001130404 729233 Hs.723090 NM_001130404 ENSG00000204918 PRR20B PRR20|PRR20A|PRR20C|PRR20D|PRR20E proline rich 20B protein-coding 161.538-9 chr14 86137447 86138030 + 0.538462 NA Intergenic L1MA4|LINE|L1 203060 NR_110155 101928767 Hs.536380 NR_110155 LINC02328 - long intergenic non-protein coding RNA 2328 ncRNA 165.692-3 chr12 87392432 87393169 + 0.538462 NA Intergenic Intergenic 62061 NR_135020 105369879 Hs.552351 NR_135020 LOC105369879 - uncharacterized LOC105369879 ncRNA 189-4 chr20 9878370 9878957 + 0.538462 NA Intergenic Intergenic -39587 NM_020341 57144 Hs.32539 NM_020341 ENSG00000101349 PAK5 PAK7 p21 (RAC1) activated kinase 5 protein-coding 156.769-4 chr14 51114808 51115177 + 0.538462 NA Intergenic Intergenic -19288 NM_052978 114088 Hs.654750 NM_015163 ENSG00000100505 TRIM9 RNF91|SPRING tripartite motif containing 9 protein-coding 163.461-4 chr5 93514989 93515478 + 0.538462 NA intron (NR_109825, intron 5 of 8) intron (NR_109825, intron 5 of 8) 56110 NR_109825 441094 Hs.457407 NR_015369 ENSG00000237187 NR2F1-AS1 - NR2F1 antisense RNA 1 ncRNA 179.539 chr18 44836370 44836750 + 0.538462 NA intron (NM_001130110, intron 2 of 3) intron (NM_001130110, intron 2 of 3) 133606 NR_036203 100422829 NR_036203 ENSG00000265957 MIR4319 - microRNA 4319 ncRNA 174.615-7 chr20 17306064 17306843 + 0.538462 NA intron (NM_002594, intron 2 of 11) intron (NM_002594, intron 2 of 11) 79413 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding 156-10 chr2 77850112 77850547 + 0.538462 NA intron (NR_110288, intron 2 of 3) L1MC1|LINE|L1 -65605 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA 157.231-3 chr14 71636143 71636628 + 0.538462 NA intron (NM_001354286, intron 8 of 24) L1MDa|LINE|L1 50087 NM_001284246 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 177.615 chr10 41732252 41732795 + 0.538462 NA Intergenic ALR/Alpha|Satellite|centr 635522 NR_024380 441666 Hs.255729 NR_024380 ENSG00000215146 LOC441666 - zinc finger protein 91 pseudogene pseudo 163.231-5 chr20 45646830 45647163 + 0.538462 NA Intergenic L1MA8|LINE|L1 -15712 NM_147198 259240 Hs.249828 NM_147198 ENSG00000180205 WFDC9 WAP9|dJ688G8.2 WAP four-disulfide core domain 9 protein-coding 202.923 chr11 76456644 76457122 + 0.538462 NA intron (NM_001300942, intron 5 of 21) intron (NM_001300942, intron 5 of 21) 11858 NM_020193 56946 Hs.352588 NM_020193 ENSG00000158636 EMSY C11orf30|GL002 EMSY transcriptional repressor, BRCA2 interacting protein-coding 159.615-5 chr3 197244077 197244581 + 0.538462 NA intron (NM_001366216, intron 4 of 23) HERVIP10FH-int|LTR|ERV1 49619 NR_039960 100616216 NR_039960 ENSG00000265850 MIR4797 - microRNA 4797 ncRNA 155-3 chr14 83137804 83138396 + 0.538462 NA Intergenic Intergenic 495468 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 159-4 chr2 27845557 27845991 + 0.538462 NA intron (NM_022128, intron 4 of 7) intron (NM_022128, intron 4 of 7) -42935 NM_001329112 9577 Hs.258314 NM_004899 ENSG00000158019 BABAM2 BRCC4|BRCC45|BRE BRISC and BRCA1 A complex member 2 protein-coding 157.385 chr1 55682807 55683280 + 0.538462 NA Intergenic Tigger3c|DNA|TcMar-Tigger 261920 NR_147162 105378739 Hs.98895 NR_147162 ENSG00000230250 LINC01753 - long intergenic non-protein coding RNA 1753 ncRNA 156.308-3 chr14 67433148 67433703 + 0.538462 NA Intergenic L1M4|LINE|L1 8505 NR_049879 100847064 NR_049879 ENSG00000265993 MIR5694 - microRNA 5694 ncRNA 205.461 chr6 132212251 132212851 + 0.538462 NA Intergenic L1M5|LINE|L1 78573 NR_146223 100507254 Hs.103070 NR_038981 ENSG00000228495 LINC01013 - long intergenic non-protein coding RNA 1013 ncRNA 158.692 chr1 115846921 115847390 + 0.538462 NA Intergenic Intergenic -6029 NM_005599 4808 Hs.46296 NM_005599 ENSG00000177551 NHLH2 HEN2|NSCL2|bHLHa34 nescient helix-loop-helix 2 protein-coding 187.154-2 chr2 86610514 86611011 + 0.538462 NA intron (NM_005667, intron 3 of 3) intron (NM_005667, intron 3 of 3) 13103 NM_001198952 7844 Hs.469199 NM_005667 ENSG00000239305 RNF103 HKF-1|KF-1|KF1|ZFP-103|ZFP103 ring finger protein 103 protein-coding 169.692-2 chr1 118191944 118192565 + 0.538462 NA Intergenic L2|LINE|L2 -7026 NM_206996 200162 Hs.528821 NM_206996 ENSG00000155761 SPAG17 CT143|PF6 sperm associated antigen 17 protein-coding 157.615-4 chr3 164231293 164231806 + 0.538462 NA Intergenic MER63B|DNA|hAT-Blackjack -59993 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA 231.769-2 chr4 49149149 49149875 + 0.538462 NA Intergenic (TCCAT)n|Simple_repeat|Simple_repeat 162870 NM_001286791 80157 Hs.479703 NM_025087 ENSG00000109182 CWH43 CWH43-C|PGAP2IP cell wall biogenesis 43 C-terminal homolog protein-coding 152.923-5 chr15 99074807 99075490 + 0.538462 NA Intergenic Intergenic -29932 NM_145728 23336 Hs.207106 NM_015286 ENSG00000182253 SYNM DMN|SYN synemin protein-coding 168.615-5 chr3 101312861 101313286 + 0.538462 NA intron (NM_016247, intron 2 of 18) L1MB8|LINE|L1 7502 NM_016247 50939 Hs.209249 NM_016247 ENSG00000081148 IMPG2 IPM200|RP56|SPACRCAN|VMD5 interphotoreceptor matrix proteoglycan 2 protein-coding 155.231-5 chr3 18040942 18041405 + 0.538462 NA intron (NR_161333, intron 3 of 4) L2c|LINE|L2 78621 NR_161333 339862 Hs.652981 NR_046199 LOC339862 - uncharacterized LOC339862 ncRNA 161 chr1 100490375 100490693 + 0.538462 NA intron (NM_001319212, intron 10 of 13) intron (NM_001319212, intron 10 of 13) -47605 NM_022049 54112 Hs.170053 NM_022049 ENSG00000181656 GPR88 COCPMR|STRG G protein-coupled receptor 88 protein-coding 190.154 chr11 18556315 18556748 + 0.538462 NA intron (NM_001040697, intron 7 of 11) intron (NM_001040697, intron 7 of 11) 22987 NM_001261385 55293 Hs.407991 NM_018314 ENSG00000151116 UEVLD ATTP|UEV3 UEV and lactate/malate dehyrogenase domains protein-coding 184.846 chr1 192399166 192399627 + 0.538462 NA Intergenic Intergenic 82404 NM_001039152 431704 Hs.558673 NM_001039152 ENSG00000253148 RGS21 - regulator of G protein signaling 21 protein-coding 163 chr1 114819400 114819981 + 0.538462 NA Intergenic MER63A|DNA|hAT-Blackjack -35113 NM_001282541 6847 Hs.112743 NM_003176 ENSG00000198765 SYCP1 CT8|HOM-TES-14|SCP-1|SCP1 synaptonemal complex protein 1 protein-coding 159.615-4 chr17 71863590 71864041 + 0.538462 NA Intergenic Intergenic 162164 NR_110876 102723505 Hs.547482 NR_110876 ROCR LINC02095 regulator of chondrogenesis RNA ncRNA 190.385 chr12 72549203 72549653 + 0.538462 NA intron (NM_013381, intron 7 of 18) intron (NM_013381, intron 7 of 18) -275919 NR_026837 283392 Hs.363603 NM_001025457 ENSG00000236333 TRHDE-AS1 - TRHDE antisense RNA 1 ncRNA 191.308-2 chr2 19057349 19057912 + 0.538462 NA Intergenic Intergenic -30659 NR_135287 400945 Hs.502854 NR_135287 ENSG00000236204 LINC01376 - long intergenic non-protein coding RNA 1376 ncRNA 156.154-14 chr8 121057708 121058182 + 0.538462 NA Intergenic Intergenic -245899 NM_021021 6641 Hs.46701 NM_021021 ENSG00000172164 SNTB1 59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43 syntrophin beta 1 protein-coding 220.384 chr13 107841986 107842682 + 0.538462 NA intron (NM_001080396, intron 1 of 2) intron (NM_001080396, intron 1 of 2) -6876 NR_046848 100874375 Hs.653972 NR_046848 FAM155A-IT1 - FAM155A intronic transcript 1 ncRNA 176.615-5 chr22 28003836 28004247 + 0.538462 NA intron (NM_001145418, intron 14 of 22) intron (NM_001145418, intron 14 of 22) -83429 NR_036169 100423034 NR_036169 ENSG00000264073 MIR3199-1 mir-3199-1 microRNA 3199-1 ncRNA 155.462-2 chr2 47962829 47963216 + 0.538462 NA Intergenic L1MCa|LINE|L1 -57229 NM_001190274 80204 Hs.352677 NM_012167 ENSG00000138081 FBXO11 FBX11|IDDFBA|PRMT9|UBR6|UG063H01|VIT1 F-box protein 11 protein-coding 153.615-4 chr9 97689383 97689903 + 0.538462 NA intron (NM_000380, intron 2 of 5) intron (NM_000380, intron 2 of 5) 7766 NR_149094 7507 Hs.654364 NM_000380 ENSG00000136936 XPA XP1|XPAC XPA, DNA damage recognition and repair factor protein-coding 153.846-7 chr6 38296047 38296594 + 0.538462 NA intron (NM_052893, intron 8 of 11) L1MEd|LINE|L1 -185276 NR_144472 101929425 Hs.665280 NR_144472 ENSG00000226533 BTBD9-AS1 - BTBD9 antisense RNA 1 ncRNA 161.615-8 chr22 49740750 49741132 + 0.538462 NA Intergenic L1MB7|LINE|L1 83390 NM_001349941 23774 Hs.127950 NM_014577 ENSG00000100425 BRD1 BRL|BRPF1|BRPF2 bromodomain containing 1 protein-coding 171-3 chr3 47607316 47607782 + 0.538462 NA intron (NM_003074, intron 26 of 27) intron (NM_003074, intron 26 of 27) -27309 NM_001206945 10675 Hs.45127 NM_006574 ENSG00000114646 CSPG5 NGC chondroitin sulfate proteoglycan 5 protein-coding 157.692-3 chr12 91427883 91428204 + 0.538462 NA Intergenic Intergenic -245226 NM_001920 1634 Hs.156316 NM_001920 ENSG00000011465 DCN CSCD|DSPG2|PG40|PGII|PGS2|SLRR1B decorin protein-coding 155.077-14 chr6 141732306 141732758 + 0.538462 NA Intergenic Intergenic 356267 NM_002511 4829 Hs.552106 NM_002511 ENSG00000135577 NMBR BB1|BB1R|NMB-R neuromedin B receptor protein-coding 172.923-3 chr2 62775005 62775376 + 0.538462 NA intron (NM_001142615, intron 5 of 22) intron (NM_001142615, intron 5 of 22) 68293 NM_001354217 23301 Hs.271667 NM_015252 ENSG00000115504 EHBP1 HPC12|NACSIN EH domain binding protein 1 protein-coding 154.231-3 chr19 48727837 48728257 + 0.538462 NA intron (NM_017805, intron 5 of 11) intron (NM_017805, intron 5 of 11) -8322 NM_001130915 284358 Hs.191815 NM_182574 ENSG00000176909 MAMSTR MASTR MEF2 activating motif and SAP domain containing transcriptional regulator protein-coding 246.308 chr3 96590055 96590726 + 0.538462 NA Intergenic Intergenic -224204 NM_001080448 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 154.231-5 chr2 77882365 77882783 + 0.538462 NA intron (NR_110288, intron 1 of 3) intron (NR_110288, intron 1 of 3) -33360 NR_110286 101927926 Hs.149042 NR_110286 ENSG00000233605 LINC01851 - long intergenic non-protein coding RNA 1851 ncRNA 156.462-6 chr6 153764269 153764592 + 0.538462 NA Intergenic L1PB3|LINE|L1 -246066 NM_001145279 4988 Hs.2353 NM_000914 ENSG00000112038 OPRM1 LMOR|M-OR-1|MOP|MOR|MOR1|OPRM opioid receptor mu 1 protein-coding 174.154 chr1 92140964 92141547 + 0.538462 NA intron (NM_183242, intron 7 of 8) intron (NM_183242, intron 7 of 8) -27669 NM_015237 23285 Hs.21554 NM_015237 ENSG00000189195 KIAA1107 - KIAA1107 protein-coding 196.846 chr14 53623957 53624448 + 0.538462 NA Intergenic Intergenic 324282 NR_049843 100847076 NR_049843 ENSG00000266431 MIR5580 - microRNA 5580 ncRNA 180.385-2 chr2 77477945 77478484 + 0.538462 NA intron (NR_146416, intron 1 of 1) intron (NR_146416, intron 1 of 1) 44162 NM_024993 80059 Hs.285782 NM_024993 ENSG00000176204 LRRTM4 - leucine rich repeat transmembrane neuronal 4 protein-coding 158.769-11 chr7 37479222 37479694 + 0.538462 NA Intergenic L1MB8|LINE|L1 -30132 NM_001206480 9844 Hs.434989 NM_014800 ENSG00000155849 ELMO1 CED-12|CED12|ELMO-1 engulfment and cell motility 1 protein-coding 173.154 chr1 238197159 238197561 + 0.538462 NA Intergenic Intergenic 288657 NR_015407 339535 Hs.532047 NR_015407 ENSG00000215808 LINC01139 LINK-A|LINKA long intergenic non-protein coding RNA 1139 ncRNA 168.539 chr10 72454965 72455332 + 0.538462 NA intron (NM_001195519, intron 3 of 6) AluSq|SINE|Alu 68838 NM_001195519 10367 Hs.524367 NM_006077 ENSG00000107745 MICU1 CALC|CBARA1|EFHA3|MPXPS|ara CALC mitochondrial calcium uptake 1 protein-coding 180.154 chr13 62839757 62840150 + 0.538462 NA Intergenic Intergenic -32594 NR_120403 100874176 Hs.402083 NR_047029 LINC00448 - long intergenic non-protein coding RNA 448 ncRNA 182.923 chr12 78949608 78950223 + 0.538462 NA intron (NM_001291901, intron 1 of 9) intron (NM_001291901, intron 1 of 9) 85141 NM_001291901 6857 Hs.310545 NM_005639 ENSG00000067715 SYT1 BAGOS|P65|SVP65|SYT synaptotagmin 1 protein-coding 153.923-9 chr7 86631137 86631502 + 0.538462 NA Intergenic L1MA6|LINE|L1 -12590 NM_001363522 2913 Hs.590575 NM_000840 ENSG00000198822 GRM3 GLUR3|GPRC1C|MGLUR3|mGlu3 glutamate metabotropic receptor 3 protein-coding 164.308-4 chr11 125969634 125970157 + 0.538462 NA intron (NM_016952, intron 18 of 19) intron (NM_016952, intron 18 of 19) 23839 NM_001365077 338667 Hs.730137 NM_001365077 VSIG10L2 - V-set and immunoglobulin domain containing 10 like 2 protein-coding 161.615-4 chr10 78886163 78886565 + 0.538462 NA Intergenic HAL1b|LINE|L1 181084 NR_015429 283050 Hs.309176 NR_015429 ENSG00000224596 ZMIZ1-AS1 - ZMIZ1 antisense RNA 1 ncRNA 209.231-3 chr5 11821794 11822473 + 0.538462 NA intron (NM_001288717, intron 1 of 20) MIRb|SINE|MIR 82313 NR_109988 1501 Hs.314543 NM_001332 ENSG00000169862 CTNND2 GT24|NPRAP catenin delta 2 protein-coding 215.923-2 chr14 50235022 50235709 + 0.538462 NA Intergenic L1ME4b|LINE|L1 -3787 NM_006939 6655 Hs.291533 NM_006939 ENSG00000100485 SOS2 NS9|SOS-2 SOS Ras/Rho guanine nucleotide exchange factor 2 protein-coding 181.154-2 chr14 39998513 39999179 + 0.538462 NA Intergenic Intergenic -566346 NM_203301 254170 Hs.146632 NM_203301 ENSG00000165355 FBXO33 BMND12|Fbx33|c14_5247 F-box protein 33 protein-coding 152-4 chr2 40341265 40341549 + 0.538462 NA intron (NM_001351483, intron 2 of 8) intron (NM_001351483, intron 2 of 8) 88897 NM_001252624 6546 Hs.31961 NM_021097 ENSG00000183023 SLC8A1 NCX1 solute carrier family 8 member A1 protein-coding 199.769-7 chr5 12317610 12318240 + 0.538462 NA Intergenic L1MD3|LINE|L1 -256932 NR_033383 404663 Hs.552273 NR_033383 LINC01194 CT49|TAG long intergenic non-protein coding RNA 1194 ncRNA 195.385 chr4 63513337 63513801 + 0.538462 NA Intergenic MLT2F|LTR|ERVL 895881 NM_001010874 253017 Hs.227752 NM_001010874 ENSG00000205678 TECRL CPVT3|GPSN2L|SRD5A2L2|TERL trans-2,3-enoyl-CoA reductase like protein-coding 180.692 chr1 39585848 39586342 + 0.538462 NA Intergenic Intergenic -9305 NM_001135653 8761 Hs.169900 NM_003819 ENSG00000090621 PABPC4 APP-1|APP1|PABP4|iPABP poly(A) binding protein cytoplasmic 4 protein-coding 159.308-6 chr5 42468056 42468627 + 0.538462 NA intron (NM_001242401, intron 1 of 10) intron (NM_001242401, intron 1 of 10) 43360 NM_001242401 2690 Hs.125180 NM_000163 ENSG00000112964 GHR GHBP|GHIP growth hormone receptor protein-coding 158.308-5 chr12 10761444 10761974 + 0.538462 NA intron (NR_120463, intron 1 of 6) L1M4c|LINE|L1 11475 NR_120463 101928162 Hs.112950 NR_120463 ENSG00000256888 LINC02366 - long intergenic non-protein coding RNA 2366 ncRNA 152-8 chr20 15763628 15763957 + 0.538462 NA intron (NM_001351663, intron 8 of 17) intron (NM_001351663, intron 8 of 17) 159522 NR_130925 613266 Hs.309149 NR_130924 LOC613266 - uncharacterized LOC613266 ncRNA 151.769-7 chr2 94968242 94968574 + 0.538462 NA Intergenic L1M4b|LINE|L1 -21066 NR_037597 442028 Hs.611545 NR_037597 ENSG00000259848 LOC442028 - uncharacterized LOC442028 ncRNA 186.692 chr1 185958843 185959714 + 0.538462 NA intron (NM_031935, intron 11 of 106) intron (NM_031935, intron 11 of 106) 224887 NM_031935 83872 Hs.58877 NM_031935 ENSG00000143341 HMCN1 ARMD1|FBLN6|FIBL-6|FIBL6 hemicentin 1 protein-coding 162.461 chr1 83095032 83095474 + 0.538462 NA intron (NR_147074, intron 8 of 10) intron (NR_147074, intron 8 of 10) -109045 NR_110633 101927498 NR_110632 ENSG00000236268 LINC01361 - long intergenic non-protein coding RNA 1361 ncRNA 169.231-8 chr7 5860680 5861165 + 0.538462 NA Intergenic Intergenic -19876 NM_001097622 654231 Hs.571315 NM_001097622 ENSG00000122543 OCM OCM1|OM|ONCM oncomodulin protein-coding 155.538-15 chr7 40535570 40536054 + 0.538462 NA intron (NM_001193312, intron 11 of 12) AluSx|SINE|Alu 400836 NM_001193313 79783 Hs.586313 NM_024728 ENSG00000175600 SUGCT C7orf10|DERP13|GA3|ORF19 succinyl-CoA:glutarate-CoA transferase protein-coding 154.461-2 chr12 60682891 60683482 + 0.538462 NA Intergenic L2a|LINE|L2 993816 NM_004731 9194 Hs.88156 NM_004731 ENSG00000118596 SLC16A7 MCT2 solute carrier family 16 member 7 protein-coding 233.308 chr10 60936301 60936868 + 0.538462 NA intron (NM_001242359, intron 2 of 11) intron (NM_001242359, intron 2 of 11) 7601 NM_001350910 9886 Hs.737374 NM_014836 ENSG00000072422 RHOBTB1 - Rho related BTB domain containing 1 protein-coding 155.231-4 chr20 11087244 11087640 + 0.538462 NA Intergenic Intergenic 60898 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA 165.154-2 chr10 55143954 55144369 + 0.538462 NA intron (NM_001354404, intron 3 of 34) intron (NM_001354404, intron 3 of 34) -342870 NM_001142767 65217 Hs.280209 NM_033056 ENSG00000150275 PCDH15 CDHR15|DFNB23|USH1F protocadherin related 15 protein-coding 168.692-3 chr14 46126369 46126700 + 0.538462 NA intron (NR_102702, intron 1 of 3) intron (NR_102702, intron 1 of 3) 62375 NR_102702 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 176.846 chr1 151193108 151193628 + 0.538462 NA Intergenic Intergenic -3171 NM_001271088 6944 Hs.2430 NM_005997 ENSG00000163159 VPS72 CFL1|Swc2|TCFL1|YL-1|YL1 vacuolar protein sorting 72 homolog protein-coding 153.308-3 chr7 97352958 97353306 + 0.538462 NA Intergenic Intergenic 236539 NM_020186 57001 Hs.592269 NM_020186 ENSG00000196636 SDHAF3 ACN9|DC11|LYRM10|Sdh7 succinate dehydrogenase complex assembly factor 3 protein-coding 152.077-13 chr8 78863373 78863690 + 0.538462 NA Intergenic ERVL-E-int|LTR|ERVL 26002 NR_157588 112935892 NR_157588 LINC02605 - long intergenic non-protein coding RNA 2605 ncRNA 168.923-3 chr2 151366638 151367283 + 0.538462 NA intron (NM_007115, intron 3 of 5) intron (NM_007115, intron 3 of 5) -1374 NR_039931 100616392 NR_039931 ENSG00000264684 MIR4773-1 - microRNA 4773-1 ncRNA 157-9 chr7 52099615 52100172 + 0.538462 NA Intergenic Intergenic -706637 NR_157843 107986794 NR_157843 LOC107986794 - uncharacterized LOC107986794 ncRNA 164.077 chr12 127873929 127874345 + 0.538462 NA Intergenic Intergenic -7480 NR_033987 400087 Hs.524846 NR_033987 ENSG00000256597 LINC02393 - long intergenic non-protein coding RNA 2393 ncRNA 201.308-8 chr8 132026428 132027081 + 0.538462 NA intron (NM_001080399, intron 13 of 13) intron (NM_001080399, intron 13 of 13) 32628 NM_001080399 729330 Hs.653174 NM_001080399 ENSG00000253117 OC90 PLA2L otoconin 90 protein-coding 166.615-9 chr5 144264876 144265387 + 0.538462 NA intron (NM_001370487, intron 2 of 2) intron (NM_001370487, intron 2 of 2) 59740 NM_001370486 57528 Hs.7093 NM_020768 ENSG00000183775 KCTD16 - potassium channel tetramerization domain containing 16 protein-coding 205.077-4 chr6 54212939 54213492 + 0.538462 NA intron (NM_138569, intron 10 of 12) intron (NM_138569, intron 10 of 12) -95226 NM_014464 27283 Hs.127011 NM_014464 ENSG00000137251 TINAG TIN-AG tubulointerstitial nephritis antigen protein-coding 161.615 chr10 60226637 60227158 + 0.538462 NA intron (NM_001204403, intron 9 of 43) L1MEf|LINE|L1 -85881 NM_001149 288 Hs.499725 NM_001149 ENSG00000151150 ANK3 ANKYRIN-G|MRT37 ankyrin 3 protein-coding 153.846-6 chr3 120366803 120367197 + 0.538462 NA Intergenic Intergenic -17646 NM_001099678 116064 Hs.518084 NM_001099678 ENSG00000163428 LRRC58 - leucine rich repeat containing 58 protein-coding 173.308-5 chr7 34132659 34133309 + 0.538462 NA intron (NM_133468, intron 14 of 15) MER21C|LTR|ERVL 227445 NM_001365308 168667 Hs.660998 NM_133468 ENSG00000164619 BMPER CRIM3|CV-2|CV2 BMP binding endothelial regulator protein-coding 156.692-3 chr10 68434958 68435308 + 0.538462 NA intron (NM_001080449, intron 10 of 20) AluJb|SINE|Alu -27839 NM_001042417 55680 Hs.653144 NM_017987 ENSG00000204130 RUFY2 RABIP4R|ZFYVE13 RUN and FYVE domain containing 2 protein-coding 161.615-6 chr2 115618959 115619289 + 0.538462 NA intron (NM_001321912, intron 6 of 25) AluSc8|SINE|Alu 275309 NM_001321913 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 155.923-6 chr3 133786732 133787250 + 0.538462 NA 3' UTR (NM_001354703, exon 23 of 23) 3' UTR (NM_001354703, exon 23 of 23) 2968 NM_021203 58477 Hs.12152 NM_021203 ENSG00000144867 SRPRB APMCF1|SR-beta SRP receptor subunit beta protein-coding 177.923-2 chr5 40263827 40264580 + 0.538462 NA Intergenic L1MEf|LINE|L1 211912 NR_104633 102467077 Hs.148993 NR_104633 LINC00603 - long intergenic non-protein coding RNA 603 ncRNA 168.538-3 chr8 106266923 106267461 + 0.538462 NA Intergenic Intergenic -2986 NM_001198533 55074 Hs.127286 NM_018002 ENSG00000164830 OXR1 Nbla00307|TLDC3 oxidation resistance 1 protein-coding 168.539-3 chr15 85165159 85165515 + 0.538462 NA Intergenic MER11A|LTR|ERVK 69444 NR_158179 101929479 Hs.681665 NR_158179 LOC101929479 - golgin A2 pseudogene pseudo 152.231-2 chr2 122446037 122446482 + 0.538462 NA Intergenic L1MA8|LINE|L1 627222 NR_147208 107985818 Hs.580182 NR_147208 ENSG00000232740 LINC01826 lnc-MKI67IP-3 long intergenic non-protein coding RNA 1826 ncRNA 165.385-15 chr6 35647318 35647874 + 0.538462 NA intron (NM_001145775, intron 2 of 11) HAL1ME|LINE|L1 17193 NR_049873 100847048 NR_049873 ENSG00000265527 MIR5690 - microRNA 5690 ncRNA 164.692 chr1 199343422 199343915 + 0.538462 NA intron (NR_147896, intron 3 of 3) intron (NR_147896, intron 3 of 3) 195070 NR_147896 400800 Hs.369324 NR_147896 ENSG00000231718 LINC02789 - long intergenic non-protein coding RNA 2789 ncRNA 160.461-3 chr20 52522716 52523221 + 0.538462 NA Intergenic L1MC3|LINE|L1 -97870 NR_110038 101927700 Hs.434465 NR_110038 ENSG00000234948 LINC01524 - long intergenic non-protein coding RNA 1524 ncRNA 160.231 chr10 49431733 49432049 + 0.538462 NA Intergenic Ricksha_0|DNA|MULE-MuDR -35802 NM_001276451 644168 Hs.534530 NM_001080520 ENSG00000165606 DRGX DRG11|PRRXL1 dorsal root ganglia homeobox protein-coding 162.692 chr11 109266176 109266523 + 0.538462 NA Intergenic L2b|LINE|L2 -155841 NM_207645 399947 Hs.172982 NM_207645 ENSG00000185742 C11orf87 LOH11CR1A|NEURIM1 chromosome 11 open reading frame 87 protein-coding 159.923-7 chr4 122309748 122310405 + 0.538462 NA intron (NM_015312, intron 57 of 83) intron (NM_015312, intron 57 of 83) -68935 NM_139243 132612 Hs.518957 NM_139243 ENSG00000164113 ADAD1 Tenr adenosine deaminase domain containing 1 protein-coding 188.769-2 chr3 15158023 15158733 + 0.538462 NA Intergenic MER94|DNA|hAT-Blackjack 47581 NR_027927 344875 Hs.722756 NR_027927 ENSG00000230524 COL6A4P1 COL6A4|COL6A4P|DIVA|DVWA|VWA6 collagen type VI alpha 4 pseudogene 1 pseudo 173.923-4 chr2 59109623 59110055 + 0.538462 NA Intergenic Intergenic -107869 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 165 chr11 111143228 111143797 + 0.538462 NA Intergenic AluJr|SINE|Alu -46194 NR_149131 105369490 NR_149131 ENSG00000271584 LINC02550 - long intergenic non-protein coding RNA 2550 ncRNA 155.385-3 chr1 168186996 168187336 + 0.538462 NA intron (NM_152902, intron 3 of 6) intron (NM_152902, intron 3 of 6) 8204 NM_001031800 261726 Hs.209431 NM_152902 ENSG00000143155 TIPRL TIP|TIP41|TIPRL1 TOR signaling pathway regulator protein-coding 167.846-7 chr3 117222480 117223128 + 0.538462 NA Intergenic Intergenic 301373 NR_121607 100506724 Hs.125983 NR_121607 ENSG00000242385 LINC00901 LSAMP-AS4|TCONS_00005428 long intergenic non-protein coding RNA 901 ncRNA 162.462-4 chr2 119863470 119863845 + 0.538462 NA intron (NM_002830, intron 3 of 26) intron (NM_002830, intron 3 of 26) 103735 NM_002830 5775 Hs.469809 NM_002830 ENSG00000088179 PTPN4 MEG|PTPMEG|PTPMEG1 protein tyrosine phosphatase non-receptor type 4 protein-coding 189-3 chr2 46398358 46398741 + 0.538462 NA Intergenic L1MB7|LINE|L1 -4382 NR_146999 105374582 Hs.570163 NR_146999 ENSG00000228100 LINC01820 - long intergenic non-protein coding RNA 1820 ncRNA 159.846-13 chr9 28030968 28031316 + 0.538462 NA intron (NM_152570, intron 5 of 6) intron (NM_152570, intron 5 of 6) -457276 NM_001256054 203228 Hs.493639 NM_018325 ENSG00000147894 C9orf72 ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 C9orf72-SMCR8 complex subunit protein-coding 151.923-3 chr1 179624316 179624692 + 0.538462 NA intron (NM_001199091, intron 6 of 16) L1ME2z|LINE|L1 18277 NM_001199092 163589 Hs.197354 NM_173533 ENSG00000162782 TDRD5 TUDOR3 tudor domain containing 5 protein-coding 163.539 chr14 55082609 55083052 + 0.538462 NA Intergenic MER47A|DNA|TcMar-Tigger 31183 NM_144578 93487 Hs.594338 NM_144578 ENSG00000168175 MAPK1IP1L C14orf32|MISS|c14_5346 mitogen-activated protein kinase 1 interacting protein 1 like protein-coding 155-8 chr7 31988109 31988453 + 0.538462 NA intron (NM_001322059, intron 3 of 17) LTR33|LTR|ERVL 82126 NM_001191057 5137 Hs.143821 NM_005020 ENSG00000154678 PDE1C DFNA74|Hcam3|cam-PDE 1C|hCam-3 phosphodiesterase 1C protein-coding 168.616 chr2 51307407 51307801 + 0.538462 NA intron (NR_135237, intron 2 of 10) intron (NR_135237, intron 2 of 10) 275003 NR_135237 730100 Hs.640140 NR_135237 ENSG00000231918 LOC730100 - uncharacterized LOC730100 ncRNA 166.846-5 chr4 79632992 79633512 + 0.538462 NA Intergenic Intergenic 140659 NR_038826 100506035 Hs.507664 NR_038826 ENSG00000250334 LINC00989 - long intergenic non-protein coding RNA 989 ncRNA 159.385-4 chr5 51561499 51561831 + 0.538462 NA Intergenic Intergenic 178217 NM_002202 3670 Hs.505 NM_002202 ENSG00000016082 ISL1 ISLET1|Isl-1 ISL LIM homeobox 1 protein-coding 229.692-2 chr7 67909584 67910401 + 0.538462 NA Intergenic (TATAA)n|Simple_repeat|Simple_repeat -110261 NR_120514 102723427 Hs.583491 NR_120514 ENSG00000225209 LOC102723427 - uncharacterized LOC102723427 ncRNA 160.769-9 chr5 97372831 97373255 + 0.538462 NA Intergenic L1PA16|LINE|L1 -131653 NR_105028 102546227 Hs.582516 NR_105028 ENSG00000250331 LINC01340 - long intergenic non-protein coding RNA 1340 ncRNA 224.538-2 chr9 30910302 30910836 + 0.538462 NA Intergenic Intergenic 470921 NR_135134 101929620 Hs.547175 NR_135134 ENSG00000260720 LINC01243 - long intergenic non-protein coding RNA 1243 ncRNA 281.538 chr14 63857102 63857984 + 0.538462 NA intron (NM_015180, intron 1 of 114) L1ME1|LINE|L1 4539 NM_015180 23224 Hs.745014 NM_015180 ENSG00000054654 SYNE2 EDMD5|KASH2|NUA|NUANCE|Nesp2|Nesprin-2|SYNE-2|TROPH spectrin repeat containing nuclear envelope protein 2 protein-coding 181.846-3 chr13 40160792 40161226 + 0.538462 NA Intergenic Intergenic -20800 NR_046870 100874127 Hs.578028 NR_046870 ENSG00000230710 LINC00332 NCRNA00332 long intergenic non-protein coding RNA 332 ncRNA 245.769 chr8 78664449 78665177 + 0.538462 NA Intergenic Intergenic -1276 NM_001362969 51101 Hs.271876 NM_016010 ENSG00000104427 ZC2HC1A C8orf70|CGI-62|FAM164A zinc finger C2HC-type containing 1A protein-coding 161.154-5 chr4 123691740 123692292 + 0.538462 NA intron (NR_027105, intron 3 of 5) intron (NR_027105, intron 3 of 5) 42025 NR_027105 285419 Hs.535763 NR_027105 ENSG00000249464 LINC01091 - long intergenic non-protein coding RNA 1091 ncRNA 152.154-5 chr18 5908536 5909106 + 0.538462 NA Intergenic L1ME4a|LINE|L1 -12867 NM_001080209 645369 NM_001080209 ENSG00000206432 TMEM200C TTMA transmembrane protein 200C protein-coding 158.462-8 chr5 58650477 58650987 + 0.538462 NA intron (NM_138453, intron 2 of 4) intron (NM_138453, intron 2 of 4) 67657 NM_138453 115827 Hs.4290 NM_138453 ENSG00000152932 RAB3C - RAB3C, member RAS oncogene family protein-coding 182.769-9 chr3 103580618 103581202 + 0.538462 NA Intergenic Intergenic -56794 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 209.538-2 chr11 132625230 132625784 + 0.538462 NA intron (NM_002545, intron 2 of 6) intron (NM_002545, intron 2 of 6) 318130 NM_001319103 4978 Hs.4817 NM_002545 ENSG00000183715 OPCML IGLON1|OBCAM|OPCM opioid binding protein/cell adhesion molecule like protein-coding 176.538-5 chr4 91688909 91689495 + 0.538462 NA Intergenic L1PA15-16|LINE|L1 588100 NR_125920 101929194 Hs.626389 NR_125920 LNCPRESS2 - lncRNA p53 regulated and ESC associated 2 ncRNA 165.385-8 chr20 39579329 39579846 + 0.538462 NA Intergenic Intergenic -354839 NR_027124 339568 Hs.434319 NR_027124 ENSG00000230324 LINC01734 - long intergenic non-protein coding RNA 1734 ncRNA 205.308 chr11 23667075 23667653 + 0.538462 NA Intergenic Intergenic -248174 NR_107021 102465860 NR_107021 ENSG00000275868 MIR8054 hsa-mir-8054 microRNA 8054 ncRNA 182.308-7 chr5 135449892 135450281 + 0.538462 NA intron (NM_001099221, intron 1 of 1) intron (NM_001099221, intron 1 of 1) 2265 NM_001099221 497189 Hs.552091 NM_001099221 ENSG00000255833 TIFAB - TIFA inhibitor protein-coding 178.231-4 chr3 29283305 29283676 + 0.538462 NA intron (NM_001003792, intron 1 of 13) GA-rich|Low_complexity|Low_complexity 2178 NM_001330696 27303 Hs.221436 NM_014483 ENSG00000144642 RBMS3 - RNA binding motif single stranded interacting protein 3 protein-coding 163.769-4 chr2 157200466 157200966 + 0.538462 NA Intergenic L1MC1|LINE|L1 -56989 NM_014568 11227 Hs.269027 NM_014568 ENSG00000136542 GALNT5 GALNAC-T5|GALNACT5 polypeptide N-acetylgalactosaminyltransferase 5 protein-coding 163.692-5 chr2 165627380 165628105 + 0.461538 NA intron (NM_024969, intron 2 of 4) intron (NM_024969, intron 2 of 4) 55406 NM_024969 80034 Hs.470479 NM_024969 ENSG00000178662 CSRNP3 FAM130A2|PPP1R73|TAIP-2|TAIP2 cysteine and serine rich nuclear protein 3 protein-coding 252.154-2 chr4 46695791 46696485 + 0.461538 NA Intergenic L1MC1|LINE|L1 213107 NM_130902 170712 Hs.479656 NM_130902 ENSG00000170516 COX7B2 - cytochrome c oxidase subunit 7B2 protein-coding 165.077-7 chr5 32856938 32857462 + 0.461538 NA Intergenic L1MB2|LINE|L1 -90243 NR_033832 340113 Hs.434404 NR_033832 ENSG00000248279 LINC02120 - long intergenic non-protein coding RNA 2120 ncRNA 169.615-3 chr2 71408099 71408824 + 0.461538 NA intron (NM_001252613, intron 20 of 27) intron (NM_001252613, intron 20 of 27) -45100 NM_001130976 8291 Hs.252180 NM_003494 ENSG00000135636 DYSF FER1L1|LGMD2B|LGMDR2|MMD1 dysferlin protein-coding 164.692-7 chr8 15730379 15730889 + 0.461538 NA intron (NM_001356429, intron 6 of 10) intron (NM_001356429, intron 6 of 10) 190371 NM_006765 7991 Hs.426324 NM_006765 ENSG00000104723 TUSC3 D8S1992|M33|MRT22|MRT7|MagT2|N33|OST3A|SLC58A2 tumor suppressor candidate 3 protein-coding 158.769-3 chr15 87574502 87574987 + 0.461538 NA Intergenic L1ME1|LINE|L1 -2185 NR_026869 145978 Hs.350808 NM_152454 ENSG00000259527 LINC00052 NCRNA00052|TMEM83 long intergenic non-protein coding RNA 52 ncRNA 189.692-2 chr2 37061641 37062461 + 0.461538 NA intron (NM_019024, intron 10 of 35) intron (NM_019024, intron 10 of 35) 22321 NM_019024 54497 Hs.744084 NM_019024 ENSG00000008869 HEATR5B - HEAT repeat containing 5B protein-coding 169.538-8 chr2 216940637 216941185 + 0.461538 NA Intergenic MIR|SINE|MIR 70139 NR_130782 101928327 Hs.350698 NR_130782 ENSG00000223874 LINC01921 - long intergenic non-protein coding RNA 1921 ncRNA 157.231-6 chr20 48620153 48620662 + 0.461538 NA Intergenic Intergenic 207592 NM_020820 57580 Hs.153310 NM_020820 ENSG00000124126 PREX1 P-REX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 protein-coding 178.615-4 chr5 46347066 46347584 + 0.461538 NA Intergenic ALR/Alpha|Satellite|centr -650945 NM_021072 348980 Hs.353176 NM_021072 ENSG00000164588 HCN1 BCNG-1|BCNG1|EIEE24|HAC-2 hyperpolarization activated cyclic nucleotide gated potassium channel 1 protein-coding 165.384-2 chr8 48148985 48149471 + 0.461538 NA Intergenic Intergenic 140797 NM_003350 7336 Hs.491695 NM_003350 ENSG00000169139 UBE2V2 DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 ubiquitin conjugating enzyme E2 V2 protein-coding 152.461 chr6 43916810 43917206 + 0.461538 NA intron (NR_024478, intron 1 of 1) MER3|DNA|hAT-Charlie 25980 NR_024478 100132354 Hs.376232 NR_024478 LINC01512 HI-LNC77 long intergenic non-protein coding RNA 1512 ncRNA 154-5 chr3 119031841 119032277 + 0.461538 NA intron (NM_001353319, intron 1 of 7) A-rich|Low_complexity|Low_complexity 2787 NM_001353323 152404 Hs.112873 NM_152538 ENSG00000144847 IGSF11 BT-IgSF|CT119|CXADRL1|Igsf13|VSIG3 immunoglobulin superfamily member 11 protein-coding 197.077-4 chr16 35762699 35763473 + 0.461538 NA Intergenic ALR/Alpha|Satellite|centr 16534 NR_033985 400533 Hs.499135 NR_033985 ENSG00000261122 LINC02167 - long intergenic non-protein coding RNA 2167 ncRNA 163.769-6 chr6 74767146 74767836 + 0.461538 NA Intergenic Kanga1d|DNA|TcMar-Tc2 361291 NR_145788 109623475 NR_145788 SNORD156 - small nucleolar RNA, C/D box 156 snoRNA 159.846 chr1 50692811 50693453 + 0.461538 NA intron (NM_007051, intron 7 of 18) L1MB7|LINE|L1 267135 NM_007051 11124 Hs.530402 NM_007051 ENSG00000185104 FAF1 CGI-03|HFAF1s|UBXD12|UBXN3A|hFAF1 Fas associated factor 1 protein-coding 155.846-7 chr3 102476369 102476829 + 0.461538 NA intron (NM_175056, intron 9 of 10) intron (NM_175056, intron 9 of 10) 41584 NM_175056 131368 Hs.352213 NM_175056 ENSG00000170044 ZPLD1 - zona pellucida like domain containing 1 protein-coding 185.769-5 chr8 117517750 117518309 + 0.461538 NA Intergenic L2a|LINE|L2 -2684 NM_001282986 90390 Hs.492612 NM_080651 ENSG00000164758 MED30 MED30S|THRAP6|TRAP25 mediator complex subunit 30 protein-coding 160.308-4 chr2 183713210 183713951 + 0.461538 NA Intergenic L1M5|LINE|L1 589137 NM_138285 129401 Hs.180591 NM_138285 ENSG00000163002 NUP35 MP-44|MP44|NP44|NUP53 nucleoporin 35 protein-coding 160.846 chr1 43456968 43457608 + 0.461538 NA Intergenic AluJb|SINE|Alu -3299 NM_001243526 81888 Hs.709864 NM_031207 ENSG00000178922 HYI HT036 hydroxypyruvate isomerase (putative) protein-coding 188.923-2 chr13 106161447 106162055 + 0.461538 NA Intergenic Intergenic -214813 NR_034119 728192 Hs.559194 NR_034119 LINC00460 - long intergenic non-protein coding RNA 460 ncRNA 178.461 chr10 44560087 44560644 + 0.461538 NA Intergenic Intergenic -175268 NM_199168 6387 Hs.522891 NM_000609 ENSG00000107562 CXCL12 IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1 C-X-C motif chemokine ligand 12 protein-coding 154.461-8 chr4 47816303 47816889 + 0.461538 NA intron (NM_006587, intron 1 of 21) intron (NM_006587, intron 1 of 21) -14749 NR_125881 101927179 Hs.570822 NR_125880 LOC101927179 - uncharacterized LOC101927179 ncRNA 161.077-2 chr12 6301377 6301765 + 0.461538 NA Intergenic Intergenic -8865 NM_018173 55200 Hs.631660 NM_018173 ENSG00000008323 PLEKHG6 MyoGEF pleckstrin homology and RhoGEF domain containing G6 protein-coding 151.846-2 chr12 22995951 22996526 + 0.461538 NA Intergenic Intergenic -179398 NR_120471 101928441 Hs.129111 NR_120471 ENSG00000256321 LOC101928441 - uncharacterized LOC101928441 ncRNA 154.154-16 chr5 26176523 26176953 + 0.461538 NA Intergenic Intergenic 861848 NM_016279 1007 Hs.272212 NM_016279 ENSG00000113100 CDH9 - cadherin 9 protein-coding 153.461 chr14 79652897 79653332 + 0.461538 NA intron (NR_073547, intron 15 of 20) intron (NR_073547, intron 15 of 20) 373734 NR_073546 9369 Hs.368307 NM_004796 ENSG00000021645 NRXN3 C14orf60 neurexin 3 protein-coding 152.923-4 chr11 81745350 81745845 + 0.461538 NA Intergenic Intergenic 145239 NR_036186 100422823 NR_036186 ENSG00000264110 MIR4300 - microRNA 4300 ncRNA 211.384-2 chr8 29022399 29023250 + 0.461538 NA intron (NM_001324384, intron 6 of 10) L1MC5a|LINE|L1 131510 NM_001324388 79618 Hs.563560 NM_024567 ENSG00000147421 HMBOX1 HNF1LA|HOT1|PBHNF homeobox containing 1 protein-coding 160.308-8 chr6 11684960 11685398 + 0.461538 NA Intergenic ERVL-E-int|LTR|ERVL 93868 NM_032744 84830 Hs.126409 NM_032744 ENSG00000111863 ADTRP AIG1L|C6orf105|dJ413H6.1 androgen dependent TFPI regulating protein protein-coding 154.231-2 chr19 27738120 27738762 + 0.461538 NA Intergenic HSAT4|Satellite|centr -54990 NR_146733 101927151 Hs.567934 NR_110687 ENSG00000267575 LOC101927151 - uncharacterized LOC101927151 ncRNA 159.846-7 chr3 106240581 106240947 + 0.461538 NA Intergenic Intergenic -371363 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 163.846-2 chr11 37064893 37065685 + 0.461538 NA Intergenic Intergenic -467010 NM_001243786 5897 Hs.714519 NM_000536 ENSG00000175097 RAG2 RAG-2 recombination activating 2 protein-coding 158.923-4 chr14 49829975 49830714 + 0.461538 NA intron (NM_001301732, intron 11 of 31) intron (NM_001301732, intron 11 of 31) 22444 NM_004713 9147 Hs.655964 NM_004713 ENSG00000165525 NEMF NY-CO-1|SDCCAG1 nuclear export mediator factor protein-coding 192.461 chr1 56640305 56641011 + 0.461538 NA intron (NR_135111, intron 2 of 2) L1MC5a|LINE|L1 -4656 NM_006252 5563 Hs.437039 NM_006252 ENSG00000162409 PRKAA2 AMPK|AMPK2|AMPKa2|PRKAA protein kinase AMP-activated catalytic subunit alpha 2 protein-coding 179 chr12 6432215 6432887 + 0.461538 NA Intergenic Intergenic -12334 NM_001242 939 Hs.355307 NM_001242 ENSG00000139193 CD27 S152|S152. LPFS2|T14|TNFRSF7|Tp55 CD27 molecule protein-coding 157.154-3 chr12 5062871 5063294 + 0.461538 NA Intergenic FLAM_C|SINE|Alu 19203 NM_002234 3741 Hs.150208 NM_002234 ENSG00000130037 KCNA5 ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1 potassium voltage-gated channel subfamily A member 5 protein-coding 187.538-2 chr11 97384314 97384837 + 0.461538 NA Intergenic Intergenic 876150 NR_135097 105369443 Hs.599377 NR_135097 ENSG00000256684 LINC02737 - long intergenic non-protein coding RNA 2737 ncRNA 154.538-2 chr14 68177811 68178325 + 0.461538 NA intron (NM_133509, intron 7 of 10) intron (NM_133509, intron 7 of 10) 354476 NM_001321815 5890 Hs.172587 NM_002877 ENSG00000182185 RAD51B R51H2|RAD51L1|REC2 RAD51 paralog B protein-coding 160.461-5 chr7 8264824 8265497 + 0.461538 NA intron (NR_125740, intron 3 of 5) L1MB7|LINE|L1 -2548 NM_004968 3382 Hs.487561 NM_004968 ENSG00000003147 ICA1 ICA69|ICAp69 islet cell autoantigen 1 protein-coding 164.692-4 chr2 107312767 107313369 + 0.461538 NA intron (NR_049853, intron 2 of 3) L1PA4|LINE|L1 36457 NR_049853 100847045 NR_049853 ENSG00000283146 MIR548AU - microRNA 548au ncRNA 156.615-12 chr8 108695401 108696009 + 0.461538 NA intron (NR_136411, intron 1 of 3) intron (NR_136411, intron 1 of 3) 91889 NR_136411 157753 Hs.99439 NM_153015 ENSG00000164841 TMEM74 NET36 transmembrane protein 74 protein-coding 154.154-22 chr8 112859408 112859782 + 0.461538 NA intron (NM_001363185, intron 8 of 66) intron (NM_001363185, intron 8 of 66) 216102 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 170.769-5 chr13 72788475 72788960 + 0.461538 NA intron (NR_146206, intron 2 of 16) MLT1J|LTR|ERVL-MaLR 6584 NR_146205 10464 Hs.441926 NM_006346 ENSG00000083535 PIBF1 C13orf24|CEP90|JBTS33|PIBF progesterone immunomodulatory binding factor 1 protein-coding 157.692-6 chr17 52277877 52278316 + 0.461538 NA Intergenic MIRb|SINE|MIR -112426 NR_146898 105371830 NR_146898 ENSG00000263317 LINC01982 - long intergenic non-protein coding RNA 1982 ncRNA 156.308-6 chr2 210600796 210601205 + 0.461538 NA intron (NR_163592, intron 5 of 27) intron (NR_163592, intron 5 of 27) 7645 NR_163592 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 162.231-4 chr15 95233007 95233696 + 0.461538 NA Intergenic Intergenic 93749 NR_034095 400456 Hs.536404 NR_034095 ENSG00000248441 LINC01197 - long intergenic non-protein coding RNA 1197 ncRNA 158.769-5 chr2 34212086 34212466 + 0.461538 NA intron (NR_126403, intron 4 of 5) intron (NR_126403, intron 4 of 5) 145050 NR_132381 106144585 Hs.580486 NR_132381 ENSG00000237790 LINC01318 - long intergenic non-protein coding RNA 1318 ncRNA 171.538-5 chr21 24878184 24878640 + 0.461538 NA intron (NR_046198, intron 2 of 3) L1ME3|LINE|L1 37862 NR_046198 339622 Hs.616316 NR_046198 ENSG00000226983 LINC01692 - long intergenic non-protein coding RNA 1692 ncRNA 160.923-3 chr15 57659167 57659744 + 0.461538 NA intron (NR_104367, intron 11 of 15) L1MC5|LINE|L1 -47066 NM_001018102 81488 Hs.437256 NM_015532 ENSG00000255529 POLR2M GCOM1|GRINL1A|Gdown|Gdown1 RNA polymerase II subunit M protein-coding 164.615-6 chr14 47498704 47499086 + 0.461538 NA intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) -155649 NR_103766 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 162.308-6 chrX 18171447 18171959 + 0.461538 NA intron (NM_153346, intron 12 of 13) intron (NM_153346, intron 12 of 13) 49183 NM_153346 139105 Hs.403802 NM_153346 ENSG00000177324 BEND2 CXorf20 BEN domain containing 2 protein-coding 179.384-2 chr8 131179567 131180120 + 0.461538 NA Intergenic Intergenic -138934 NM_001115 114 Hs.591859 NM_001115 ENSG00000155897 ADCY8 AC8|ADCY3|HBAC1 adenylate cyclase 8 protein-coding 161.538-14 chr6 38128346 38128991 + 0.461538 NA intron (NM_021943, intron 5 of 5) L1PB1|LINE|L1 308941 NM_021943 60685 Hs.36959 NM_021943 ENSG00000156639 ZFAND3 TEX27 zinc finger AN1-type containing 3 protein-coding 178.461-2 chr2 184477136 184477796 + 0.461538 NA Intergenic Intergenic 98491 NR_039638 100616305 NR_039638 ENSG00000266808 MIR548AE1 - microRNA 548ae-1 ncRNA 160.154-10 chr4 31143379 31144022 + 0.461538 NA 3' UTR (NM_001173523, exon 3 of 3) 3' UTR (NM_001173523, exon 3 of 3) -27444 NR_125935 102723778 Hs.210739 NR_125935 ENSG00000251182 LINC02497 - long intergenic non-protein coding RNA 2497 ncRNA 156.154-15 chr8 135901980 135902510 + 0.461538 NA Intergenic L2a|LINE|L2 444789 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 154.923-5 chr2 135899086 135899486 + 0.461538 NA Intergenic Intergenic -22843 NM_005915 4175 Hs.444118 NM_005915 ENSG00000076003 MCM6 MCG40308|Mis5|P105MCM minichromosome maintenance complex component 6 protein-coding 163.231-10 chr8 57570404 57570843 + 0.461538 NA Intergenic Intergenic -175526 NR_134276 286178 Hs.255156 NR_134276 ENSG00000254139 LOC286178 - uncharacterized LOC286178 ncRNA 185.538-2 chr14 81764233 81764966 + 0.461538 NA Intergenic Intergenic -21461 NR_146498 102724294 NR_146498 ENSG00000258718 LINC02311 - long intergenic non-protein coding RNA 2311 ncRNA 167.077-9 chr6 69362912 69363323 + 0.461538 NA intron (NM_001704, intron 29 of 31) intron (NM_001704, intron 29 of 31) 433349 NM_001363722 55788 Hs.271643 NM_018368 ENSG00000168216 LMBRD1 C6orf209|LMBD1|MAHCF|NESI LMBR1 domain containing 1 protein-coding 159.538-4 chr13 42084515 42084891 + 0.461538 NA intron (NM_178009, intron 1 of 29) intron (NM_178009, intron 1 of 29) 36055 NM_178009 160851 Hs.630380 NM_152910 ENSG00000102780 DGKH DGKeta diacylglycerol kinase eta protein-coding 175.923-3 chr4 88355999 88356792 + 0.461538 NA Intergenic LTR49-int|LTR|ERV1 -22344 NM_017912 55008 Hs.529317 NM_017912 ENSG00000138642 HERC6 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 protein-coding 212.077 chr1 91059753 91060284 + 0.461538 NA Intergenic AluJb|SINE|Alu -37763 NM_032186 84146 Hs.173001 NM_016620 ENSG00000122482 ZNF644 BM-005|MYP21|NatF|ZEP-2 zinc finger protein 644 protein-coding 160.308 chr1 202071466 202071861 + 0.461538 NA Intergenic Intergenic -51254 NM_004767 9283 Hs.132049 NM_004767 ENSG00000170075 GPR37L1 ET(B)R-LP-2|ETBR-LP-2|ETBRLP2 G protein-coupled receptor 37 like 1 protein-coding 154.154 chr1 38734684 38735046 + 0.461538 NA Intergenic Intergenic 124907 NM_001271851 64121 Hs.532461 NM_022157 ENSG00000116954 RRAGC GTR2|RAGC|TIB929 Ras related GTP binding C protein-coding 168.692-6 chr5 170810661 170811151 + 0.461538 NA intron (NM_014211, intron 9 of 9) intron (NM_014211, intron 9 of 9) 27181 NM_014211 2568 Hs.26225 NM_014211 ENSG00000094755 GABRP - gamma-aminobutyric acid type A receptor pi subunit protein-coding 203.692-4 chr4 30889836 30890768 + 0.461538 NA intron (NM_032457, intron 1 of 2) intron (NM_032457, intron 1 of 2) 169933 NM_002589 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 195.538 chr1 86734570 86735042 + 0.461538 NA intron (NM_016009, intron 6 of 8) intron (NM_016009, intron 6 of 8) 30230 NM_001206652 51100 Hs.136309 NM_016009 ENSG00000097033 SH3GLB1 Bif-1|CGI-61|PPP1R70|dJ612B15.2 SH3 domain containing GRB2 like, endophilin B1 protein-coding 156.769 chr10 24101097 24101568 + 0.461538 NA intron (NM_001098500, intron 2 of 18) intron (NM_001098500, intron 2 of 18) -107459 NM_001282767 56243 Hs.445885 NM_019590 ENSG00000120549 KIAA1217 ETL4|SKT KIAA1217 protein-coding 160.308-3 chr11 18544300 18544919 + 0.461538 NA intron (NM_001040697, intron 9 of 11) intron (NM_001040697, intron 9 of 11) -17667 NM_006292 7251 Hs.523512 NM_006292 ENSG00000074319 TSG101 TSG10|VPS23 tumor susceptibility 101 protein-coding 189.231-5 chr7 13288239 13288830 + 0.461538 NA Intergenic L1MA4|LINE|L1 600901 NM_005738 10124 Hs.245540 NM_005738 ENSG00000122644 ARL4A ARL4 ADP ribosylation factor like GTPase 4A protein-coding 160.154-7 chr2 68057666 68058128 + 0.461538 NA intron (NM_001190263, intron 1 of 5) intron (NM_001190263, intron 1 of 5) 5107 NM_001190265 10438 Hs.602900 NM_006333 ENSG00000197223 C1D LRP1|Rrp47|SUN-CoR|SUNCOR|hC1D C1D nuclear receptor corepressor protein-coding 161.538 chr1 24475102 24475622 + 0.461538 NA Intergenic Intergenic -26982 NM_001251979 11123 Hs.656799 NM_013441 ENSG00000117602 RCAN3 DSCR1L2|MCIP3|RCN3|hRCN3 RCAN family member 3 protein-coding 182.769-10 chr3 191255556 191256081 + 0.461538 NA intron (NM_198184, intron 4 of 4) LTR49-int|LTR|ERV1 -21213 NR_133663 106480738 NR_133663 ENSG00000233308 OSTN-AS1 - OSTN antisense RNA 1 ncRNA 174.923-13 chr7 83774842 83775460 + 0.461538 NA Intergenic MER47B|DNA|TcMar-Tigger -126012 NM_012431 9723 Hs.440730 NM_012431 ENSG00000170381 SEMA3E M-SEMAH|M-SemaK|SEMAH|coll-5 semaphorin 3E protein-coding 181.154-6 chr4 126321744 126322521 + 0.461538 NA Intergenic L2a|LINE|L2 814873 NR_031746 100302267 NR_031746 ENSG00000283550 MIR2054 hsa-mir-2054 microRNA 2054 ncRNA 159.538-3 chr11 60075628 60076189 + 0.461538 NA Intergenic Intergenic -12756 NM_000139 2206 Hs.386748 NM_000139 ENSG00000149534 MS4A2 APY|ATOPY|FCER1B|FCERI|IGEL|IGER|IGHER|MS4A1 membrane spanning 4-domains A2 protein-coding 173.692 chr4 77776736 77777519 + 0.461538 NA intron (NM_001365006, intron 1 of 11) MLT1L|LTR|ERVL-MaLR 41937 NM_001365007 246175 Hs.592519 NM_144571 ENSG00000138767 CNOT6L CCR4b CCR4-NOT transcription complex subunit 6 like protein-coding 167.538-3 chr16 76300294 76300816 + 0.461538 NA intron (NM_001322189, intron 2 of 24) intron (NM_001322189, intron 2 of 24) -9297 NM_138994 85445 Hs.461389 NM_033401 ENSG00000152910 CNTNAP4 CASPR4 contactin associated protein like 4 protein-coding 169.231-2 chr14 26738948 26739476 + 0.461538 NA intron (NR_147061, intron 3 of 6) intron (NR_147061, intron 3 of 6) -70136 NR_110557 102724890 Hs.569381 NR_110556 ENSG00000257185 LINC02293 - long intergenic non-protein coding RNA 2293 ncRNA 208.615 chr21 29664999 29665747 + 0.461538 NA intron (NM_000830, intron 4 of 16) Tigger19a|DNA|TcMar-Tigger 69333 NR_033368 100379661 Hs.659368 NR_033368 ENSG00000156273 GRIK1-AS2 C21orf41|NCRNA00258 GRIK1 antisense RNA 2 ncRNA 234.615-2 chr8 121622024 121622842 + 0.461538 NA intron (NM_005328, intron 2 of 3) MIRb|SINE|MIR -16913 NR_002835 594842 Hs.668686 NR_002835 HAS2-AS1 HAS2-AS|HAS2AS|HASNT|NCRNA00077 HAS2 antisense RNA 1 ncRNA 165.615-2 chr21 24523294 24523899 + 0.461538 NA intron (NR_135519, intron 1 of 2) intron (NR_135519, intron 1 of 2) 94856 NR_135521 105372751 Hs.652040 NR_135519 ENSG00000237484 LINC01684 lnc-JAM2-6 long intergenic non-protein coding RNA 1684 ncRNA 189.231 chr2 210596579 210597245 + 0.461538 NA intron (NR_163592, intron 3 of 27) intron (NR_163592, intron 3 of 27) 3557 NR_163592 1373 Hs.149252 NM_001875 ENSG00000021826 CPS1 CPSASE1|PHN carbamoyl-phosphate synthase 1 protein-coding 188.231-8 chr8 137391754 137392234 + 0.461538 NA Intergenic Intergenic 21594 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 157.308-12 chr9 24183564 24184242 + 0.461538 NA Intergenic L1ME3|LINE|L1 -333302 NM_001351456 1993 Hs.166109 NM_004432 ENSG00000107105 ELAVL2 HEL-N1|HELN1|HUB ELAV like RNA binding protein 2 protein-coding 159.231-9 chr5 122044330 122044739 + 0.461538 NA Intergenic L1PA15|LINE|L1 32640 NM_001317073 4015 Hs.102267 NM_002317 ENSG00000113083 LOX AAT10 lysyl oxidase protein-coding 201.923-2 chr15 72140843 72141468 + 0.461538 NA TTS (NM_001172109) TTS (NM_001172109) 22752 NM_001172111 123228 Hs.513002 NM_145204 ENSG00000166192 SENP8 DEN1|NEDP1|PRSC2 SUMO peptidase family member, NEDD8 specific protein-coding 164.615-7 chr14 64057744 64058315 + 0.461538 NA intron (NM_015180, intron 49 of 114) L1MA2|LINE|L1 37096 NR_031677 100313830 NR_031677 ENSG00000221537 MIR548H1 MIR548H-1|MIRN548H1 microRNA 548h-1 ncRNA 163.154-6 chrX 91462286 91462817 + 0.461538 NA Intergenic L1MC|LINE|L1 -27552 NR_110659 102724167 Hs.571694 NR_110659 ENSG00000234161 PABPC5-AS1 CXorf46 PABPC5 antisense RNA 1 ncRNA 156.923-17 chr4 31917885 31918330 + 0.461538 NA Intergenic Intergenic -79272 NR_125936 102723828 Hs.575118 NR_125936 ENSG00000251129 LINC02506 - long intergenic non-protein coding RNA 2506 ncRNA 155.615-6 chr5 23979410 23980117 + 0.461538 NA intron (NR_131245, intron 3 of 4) MER50|LTR|ERV1 28415 NR_131245 439936 Hs.638078 NR_131245 ENSG00000248874 C5orf17 - chromosome 5 open reading frame 17 (putative) ncRNA 169.769-3 chr12 8879953 8880593 + 0.461538 NA Intergenic AluSx1|SINE|Alu -34236 NM_004426 1911 Hs.744902 NM_004426 ENSG00000111752 PHC1 EDR1|HPH1|MCPH11|RAE28 polyhomeotic homolog 1 protein-coding 151.538-6 chr4 44682970 44683632 + 0.461538 NA exon (NM_021927, exon 6 of 17) exon (NM_021927, exon 6 of 17) 4881 NM_021927 60558 Hs.546419 NM_021927 ENSG00000151806 GUF1 EF-4|EF4|EIEE40 GUF1 homolog, GTPase protein-coding 153.846-4 chr21 15471884 15472544 + 0.461538 NA Intergenic Intergenic -257720 NM_001283041 29761 Hs.743994 NM_013396 ENSG00000155313 USP25 USP21 ubiquitin specific peptidase 25 protein-coding 161.692-4 chr18 33191789 33192349 + 0.461538 NA intron (NM_001308126, intron 20 of 23) intron (NM_001308126, intron 20 of 23) 248502 NM_001371121 154.308-2 chr1 111128919 111129350 + 0.461538 NA intron (NM_001349881, intron 4 of 9) intron (NM_001349881, intron 4 of 9) -10249 NM_001007794 10390 Hs.363572 NM_006090 ENSG00000134255 CEPT1 - choline/ethanolamine phosphotransferase 1 protein-coding 182.769 chr1 147303638 147304132 + 0.461538 NA Intergenic L1M2|LINE|L1 60743 NM_001348452 9557 Hs.191164 NM_004284 ENSG00000131778 CHD1L ALC1|CHDL chromodomain helicase DNA binding protein 1 like protein-coding 151.538-3 chr2 193064436 193065140 + 0.461538 NA Intergenic L1MA4A|LINE|L1 314943 NR_152587 64002 Hs.546994 NR_002769 ENSG00000227418 PCGEM1 LINC00071|NCRNA00071|PCAT9 PCGEM1 prostate-specific transcript ncRNA 161.846-8 chr6 66042546 66043116 + 0.461538 NA Intergenic Intergenic 254952 NR_026540 442229 Hs.390414 NR_026540 SLC25A51P1 MCART3P|bA707M13.1 SLC25A51 pseudogene 1 pseudo 196.154-3 chr7 99596461 99597222 + 0.461538 NA Intergenic Intergenic -1426 NM_001195542 100289187 Hs.729333 NM_001195541 ENSG00000244219 TMEM225B GS1-259H13.2 transmembrane protein 225B protein-coding 152.769-4 chr2 61535468 61536028 + 0.461538 NA intron (NM_003400, intron 1 of 24) intron (NM_003400, intron 1 of 24) 2608 NM_003400 7514 Hs.370770 NM_003400 ENSG00000082898 XPO1 CRM-1|CRM1|emb|exp1 exportin 1 protein-coding 170.154-6 chr7 82099752 82100135 + 0.461538 NA intron (NM_000722, intron 6 of 38) L1PA10|LINE|L1 90766 NR_110076 101927356 Hs.571348 NR_110076 ENSG00000223770 LOC101927356 - uncharacterized LOC101927356 ncRNA 187.231 chr8 88199553 88200021 + 0.461538 NA intron (NM_005941, intron 1 of 9) intron (NM_005941, intron 1 of 9) 127696 NM_005941 4325 Hs.492187 NM_005941 ENSG00000156103 MMP16 C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP matrix metallopeptidase 16 protein-coding 162.692-2 chr11 126258508 126258877 + 0.461538 NA intron (NM_001330446, intron 7 of 8) intron (NM_001330446, intron 7 of 8) 10203 NM_003139 6734 Hs.368376 NM_003139 ENSG00000182934 SRPRA DP|SRPR|Sralpha SRP receptor subunit alpha protein-coding 167.231-6 chr5 130748484 130748892 + 0.461538 NA Intergenic L1MA7|LINE|L1 416568 NM_005340 3094 Hs.483305 NM_005340 ENSG00000169567 HINT1 HINT|NMAN|PKCI-1|PRKCNH1 histidine triad nucleotide binding protein 1 protein-coding 153.231-15 chr5 58213318 58213813 + 0.461538 NA Intergenic LTR16C|LTR|ERVL -91224 NR_104669 101928569 Hs.319708 NR_104669 LINC02101 - long intergenic non-protein coding RNA 2101 ncRNA 176.231-2 chr2 18058035 18058757 + 0.461538 NA Intergenic Intergenic 179729 NM_002252 3790 Hs.414489 NM_002252 ENSG00000170745 KCNS3 KV9.3 potassium voltage-gated channel modifier subfamily S member 3 protein-coding 155.231-6 chr3 34649735 34650290 + 0.461538 NA Intergenic MIR3|SINE|MIR 744011 NR_110817 101928135 Hs.550715 NR_110817 LOC101928135 - uncharacterized LOC101928135 ncRNA 160.461-2 chr2 103765561 103766004 + 0.461538 NA Intergenic Intergenic 642550 NR_037885 100287010 Hs.694603 NR_037885 LOC100287010 - uncharacterized LOC100287010 ncRNA 154.154-8 chr18 42719138 42719568 + 0.461538 NA Intergenic Intergenic 396332 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding 169.384 chr1 227675221 227675756 + 0.461538 NA intron (NR_102302, intron 5 of 5) intron (NR_102302, intron 5 of 5) 22219 NR_036753 401983 Hs.681816 NR_036753 ZNF847P gm127 zinc finger protein 847, pseudogene pseudo 189.692-4 chr8 88017286 88017990 + 0.461538 NA Intergenic Intergenic -143623 NM_152418 138009 Hs.371738 NM_152418 ENSG00000176566 DCAF4L2 WDR21C DDB1 and CUL4 associated factor 4 like 2 protein-coding 161.692-2 chr11 24297237 24297952 + 0.461538 NA Intergenic Intergenic -199459 NM_001252008 338645 Hs.144138 NM_001009909 ENSG00000187398 LUZP2 KFSP2566|PRO6246 leucine zipper protein 2 protein-coding 184.692 chr13 84142091 84142720 + 0.461538 NA intron (NR_046871, intron 1 of 6) L1MB1|LINE|L1 1803 NR_046871 100874128 Hs.578060 NR_046871 LINC00333 NCRNA00333 long intergenic non-protein coding RNA 333 ncRNA 177.154-4 chr3 191342238 191342801 + 0.461538 NA intron (NM_178335, intron 1 of 11) intron (NM_178335, intron 1 of 11) -11983 NM_198152 257313 Hs.518492 NM_198152 ENSG00000188958 UTS2B U2B|URP|UTS2D urotensin 2B protein-coding 174.846 chr14 72769870 72770687 + 0.461538 NA intron (NM_001280544, intron 2 of 9) L1MC5|LINE|L1 122371 NM_001280544 8110 Hs.162868 NM_012074 ENSG00000205683 DPF3 BAF45C|CERD4 double PHD fingers 3 protein-coding 173.769-2 chr14 53071322 53071839 + 0.461538 NA intron (NM_030637, intron 6 of 11) intron (NM_030637, intron 6 of 11) 81743 NM_001160147 80821 Hs.125525 NM_030637 ENSG00000100523 DDHD1 PA-PLA1|PAPLA1|SPG28 DDHD domain containing 1 protein-coding 166.615-3 chr14 85519629 85520362 + 0.461538 NA Intergenic Intergenic -10030 NR_144387 23768 Hs.533710 NM_013231 ENSG00000185070 FLRT2 - fibronectin leucine rich transmembrane protein 2 protein-coding 155.692 chr10 118009682 118010065 + 0.461538 NA intron (NM_014904, intron 4 of 4) L4_B_Mam|LINE|RTE-X -36948 NR_026940 255082 Hs.89387 NM_178816 ENSG00000177640 CASC2 C10orf5 cancer susceptibility 2 ncRNA 154.615-13 chr8 141273477 141274040 + 0.461538 NA Intergenic Intergenic -19129 NM_001286646 57210 Hs.372492 NM_001080431 ENSG00000022567 SLC45A4 - solute carrier family 45 member 4 protein-coding 159.846-4 chr2 60175659 60176158 + 0.461538 NA Intergenic MamRep605|LTR?|LTR? 207128 NR_132991 106660609 Hs.565545 NR_132991 ENSG00000228590 MIR4432HG - MIR4432 host gene ncRNA 160.846-2 chr1 70807052 70807463 + 0.461538 NA Intergenic LTR2752|LTR|ERV1 100804 NR_125938 101927244 Hs.568660 NR_125938 ENSG00000229051 LINC01788 - long intergenic non-protein coding RNA 1788 ncRNA 179.231 chr10 64650784 64651466 + 0.461538 NA Intergenic Intergenic -174403 NR_001446 305 Hs.591361 NR_001446 ANXA2P3 ANX2L3|ANX2P3|LIP2|LPC2C annexin A2 pseudogene 3 pseudo 160.846-7 chr4 32166073 32166677 + 0.461538 NA Intergenic Intergenic -143953 NR_134682 105377651 Hs.581935 NR_134682 LOC105377651 - uncharacterized LOC105377651 ncRNA 152.692-4 chr2 234276252 234276684 + 0.461538 NA Intergenic Intergenic 178127 NR_146988 105373934 Hs.471685 NR_146988 ENSG00000231682 LINC01891 - long intergenic non-protein coding RNA 1891 ncRNA 154.154-19 chr6 115661003 115661572 + 0.461538 NA Intergenic Intergenic -17452 NR_134602 105377962 Hs.571066 NR_134602 LINC02534 - long intergenic non-protein coding RNA 2534 ncRNA 190.615-7 chr4 180448041 180448574 + 0.461538 NA Intergenic LTR54|LTR|ERV1 710842 NR_033918 728081 Hs.535735 NR_033918 ENSG00000248197 LINC00290 NCRNA00290 long intergenic non-protein coding RNA 290 ncRNA 243.384 chr11 56471289 56471867 + 0.461538 NA Intergenic Intergenic -1040 NM_001004742 219482 Hs.553631 NM_001004742 ENSG00000174937 OR5M3 OR11-191 olfactory receptor family 5 subfamily M member 3 protein-coding 183.308-3 chr14 54827633 54828300 + 0.461538 NA Intergenic Intergenic 50227 NR_036194 100422984 NR_036194 ENSG00000265432 MIR4308 - microRNA 4308 ncRNA 179.538-9 chr8 86786868 86787509 + 0.461538 NA Intergenic L2a|LINE|L2 -43513 NM_019098 54714 Hs.154433 NM_019098 ENSG00000170289 CNGB3 ACHM1 cyclic nucleotide gated channel beta 3 protein-coding 152.154-13 chr7 18291003 18291760 + 0.461538 NA intron (NM_001321896, intron 1 of 12) MIR|SINE|MIR 1289 NM_001321896 9734 Hs.196054 NM_014707 ENSG00000048052 HDAC9 HD7|HD7b|HD9|HDAC|HDAC7|HDAC7B|HDAC9B|HDAC9FL|HDRP|MITR histone deacetylase 9 protein-coding 177.769-4 chr20 17251302 17252096 + 0.461538 NA intron (NM_001201529, intron 1 of 10) MLT1G|LTR|ERVL-MaLR 24659 NM_002594 5126 Hs.315186 NM_002594 ENSG00000125851 PCSK2 NEC 2|NEC-2|NEC2|PC2|SPC2 proprotein convertase subtilisin/kexin type 2 protein-coding 154.384-2 chr4 11805408 11805832 + 0.461538 NA Intergenic Intergenic 22442 NR_162127 113218507 NR_162127 MIR12113 - microRNA 12113 ncRNA 178.154-3 chr17 58911306 58912042 + 0.461538 NA intron (NM_014906, intron 1 of 6) intron (NM_014906, intron 1 of 6) 155805 NR_048561 22843 Hs.245044 NM_014906 ENSG00000175175 PPM1E CaMKP-N|POPX1|PP2CH|caMKN protein phosphatase, Mg2+/Mn2+ dependent 1E protein-coding 155.538-17 chr9 89114774 89115327 + 0.461538 NA intron (NM_016848, intron 1 of 11) intron (NM_016848, intron 1 of 11) 63768 NM_016848 53358 Hs.292737 NM_016848 ENSG00000148082 SHC3 N-Shc|NSHC|RAI|SHCC SHC adaptor protein 3 protein-coding 194-2 chr14 74823166 74823965 + 0.461538 NA intron (NM_019589, intron 17 of 20) intron (NM_019589, intron 17 of 20) 40269 NM_001080408 283571 Hs.675293 NM_001080408 ENSG00000119608 PROX2 PROX-2 prospero homeobox 2 protein-coding 177.538-3 chr8 139783210 139783719 + 0.461538 NA intron (NM_001160372, intron 21 of 22) L1ME1|LINE|L1 -80341 NM_001282534 51305 Hs.493037 NM_001282534 ENSG00000169427 KCNK9 K2p9.1|KT3.2|TASK-3|TASK3 potassium two pore domain channel subfamily K member 9 protein-coding 156.384 chr8 112239455 112239887 + 0.461538 NA intron (NM_001363185, intron 62 of 66) L1M5|LINE|L1 -403822 NR_031745 100302225 NR_031745 ENSG00000238399 MIR2053 hsa-mir-2053 microRNA 2053 ncRNA 203.154-5 chr6 39375463 39376208 + 0.461538 NA intron (NM_001289020, intron 15 of 21) MLT2B1|LTR|ERVL -52867 NM_001363784 83795 Hs.287765 NM_032115 ENSG00000095981 KCNK16 K2p16.1|TALK-1|TALK1 potassium two pore domain channel subfamily K member 16 protein-coding 161.769-2 chr18 1768176 1768722 + 0.461538 NA Intergenic Intergenic -408820 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 243.538 chr10 56671406 56672671 + 0.461538 NA Intergenic Intergenic -310765 NM_032997 11130 Hs.591363 NM_007057 ENSG00000122952 ZWINT HZwint-1|KNTC2AP|SIP30|ZWINT1 ZW10 interacting kinetochore protein protein-coding 161.461-2 chr2 160446090 160446499 + 0.461538 NA intron (NM_002897, intron 1 of 13) L3|LINE|CR1 -38412 NR_039946 100616364 NR_039946 ENSG00000283734 MIR4785 mir-4785 microRNA 4785 ncRNA 180.923-4 chr5 129037639 129038296 + 0.461538 NA Intergenic AluJo|SINE|Alu -56782 NM_016048 51015 Hs.483296 NM_016048 ENSG00000066583 ISOC1 CGI-111 isochorismatase domain containing 1 protein-coding 152.769-6 chr3 166599614 166599960 + 0.461538 NA Intergenic Tigger1|DNA|TcMar-Tigger -298896 NR_135545 105374194 NR_135545 LOC105374194 inv3q26.1 uncharacterized LOC105374194 ncRNA 179.077-4 chr14 47331798 47332414 + 0.461538 NA intron (NM_001113498, intron 1 of 16) intron (NM_001113498, intron 1 of 16) 11140 NM_182830 161357 Hs.436380 NM_182830 ENSG00000139915 MDGA2 MAMDC1|c14_5286 MAM domain containing glycosylphosphatidylinositol anchor 2 protein-coding 165.692-11 chr7 126854768 126855308 + 0.461538 NA intron (NM_001371085, intron 6 of 10) L1PB|LINE|L1 203146 NR_030323 693177 NR_030323 ENSG00000207692 MIR592 MIRN592|hsa-mir-592|mir-592 microRNA 592 ncRNA 252.154 chr2 101568738 101569423 + 0.461538 NA Intergenic Intergenic -93968 NM_001367510 731220 Hs.662488 NM_207403 ENSG00000196460 RFX8 - RFX family member 8, lacking RFX DNA binding domain protein-coding 200.615 chr1 113322284 113322918 + 0.461538 NA Intergenic L2a|LINE|L2 -67914 NM_152900 260425 Hs.486189 NM_020965 ENSG00000081026 MAGI3 MAGI-3|dJ730K3.2 membrane associated guanylate kinase, WW and PDZ domain containing 3 protein-coding 151.846-10 chr6 119903849 119904501 + 0.461538 NA Intergenic L3|LINE|CR1 -111004 NR_036098 100422951 NR_036098 ENSG00000265725 MIR3144 mir-3144 microRNA 3144 ncRNA 167.769-9 chr6 165450006 165450695 + 0.461538 NA exon (NM_001130690, exon 4 of 22) exon (NM_001130690, exon 4 of 22) -140745 NM_144980 168090 Hs.144734 NM_144980 ENSG00000112539 C6orf118 bA85G2.1|dJ416F21.2 chromosome 6 open reading frame 118 protein-coding 171.384-3 chr16 65588552 65589020 + 0.461538 NA Intergenic Intergenic -12486 NR_027755 283867 Hs.444774 NM_001101346 ENSG00000261742 LINC00922 - long intergenic non-protein coding RNA 922 ncRNA 156.923-4 chr13 65118291 65118788 + 0.461538 NA Intergenic Intergenic -747508 NR_132362 105370242 Hs.578051 NR_132362 LINC01052 - long intergenic non-protein coding RNA 1052 ncRNA 159.154-2 chr12 87820010 87820635 + 0.461538 NA Intergenic Intergenic -35611 NR_033410 400058 Hs.572212 NR_033410 MKRN9P MKRN5|MKRN9|MKRNP6|RNF65|ZNF127L3 makorin ring finger protein 9, pseudogene pseudo 161.538-16 chrX 148088082 148088558 + 0.461538 NA Intergenic L1ME3D|LINE|L1 106983 NM_152578 158521 Hs.128580 NM_152578 ENSG00000176988 FMR1NB CT37|NY-SAR-35|NYSAR35 FMR1 neighbor protein-coding 160.384 chr12 74553868 74554452 + 0.461538 NA Intergenic L1MB5|LINE|L1 16325 NM_001136262 552889 Hs.744849 NM_001136262 ENSG00000253719 ATXN7L3B lnc-SCA7 ataxin 7 like 3B protein-coding 170.384 chr5 18702790 18703412 + 0.461538 NA Intergenic Intergenic 895827 NR_134287 646241 Hs.407197 NR_134286 LINC02223 - long intergenic non-protein coding RNA 2223 ncRNA 159.154-8 chr8 140715075 140715740 + 0.461538 NA intron (NR_148037, intron 25 of 34) AluSx1|SINE|Alu 3162 NM_001352750 5747 Hs.395482 NM_005607 ENSG00000169398 PTK2 FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK protein tyrosine kinase 2 protein-coding 191.384 chr3 106070671 106071263 + 0.461538 NA Intergenic Intergenic -201566 NM_001321790 868 Hs.430589 NM_170662 ENSG00000114423 CBLB Cbl-b|Nbla00127|RNF56 Cbl proto-oncogene B protein-coding 161.538-5 chr11 84529312 84529806 + 0.461538 NA intron (NM_001142699, intron 7 of 27) L1PA15|LINE|L1 191383 NM_001351276 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 201.923-5 chr2 104747289 104747917 + 0.461538 NA intron (NR_038231, intron 3 of 3) MIRb|SINE|MIR 10116 NR_038231 284998 Hs.410180 NR_038231 ENSG00000234177 LINC01114 PANCAT long intergenic non-protein coding RNA 1114 ncRNA 157.384 chr21 28554164 28554762 + 0.461538 NA Intergenic MER65-int|LTR|ERV1 15145 NR_026552 118421 Hs.438549 NR_026552 ENSG00000226935 LINC00161 C21orf100|Linc-USP16|NCRNA00161 long intergenic non-protein coding RNA 161 ncRNA 151.923-6 chr6 165721608 165722237 + 0.461538 NA Intergenic L5|LINE|RTE-X -59642 NM_006661 10846 Hs.348762 NM_006661 ENSG00000112541 PDE10A ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19 phosphodiesterase 10A protein-coding 153.923-3 chr16 80813131 80813511 + 0.461538 NA Intergenic Charlie1b|DNA|hAT-Charlie -8723 NM_152342 124359 Hs.60257 NM_152342 ENSG00000166446 CDYL2 PCCP1 chromodomain Y like 2 protein-coding 174.077-3 chr8 90989519 90990048 + 0.461538 NA Intergenic AluY|SINE|Alu -4545 NM_001190972 100127983 Hs.733266 NM_001190972 ENSG00000253250 C8orf88 - chromosome 8 open reading frame 88 protein-coding 174.923-2 chr11 32831606 32832297 + 0.461538 NA intron (NM_024081, intron 2 of 5) AluSx|SINE|Alu 2024 NM_024081 79056 Hs.471695 NM_024081 ENSG00000135378 PRRG4 PRGP4|TMG4 proline rich and Gla domain 4 protein-coding 153.692 chr15 47210334 47210968 + 0.461538 NA intron (NM_001198999, intron 1 of 19) AluSc|SINE|Alu 26562 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding 188.384 chr4 30372968 30373838 + 0.461538 NA Intergenic (ATAG)n|Simple_repeat|Simple_repeat -346966 NM_001173523 5099 Hs.479439 NM_002589 ENSG00000169851 PCDH7 BH-Pcdh|BHPCDH|PPP1R120 protocadherin 7 protein-coding 159.846-9 chr5 32206550 32207082 + 0.461538 NA Intergenic Intergenic -32497 NM_022130 64083 Hs.408909 NM_022130 ENSG00000113384 GOLPH3 GOPP1|GPP34|MIDAS|Vps74 golgi phosphoprotein 3 protein-coding 183.077-5 chr3 115306078 115306523 + 0.461538 NA Intergenic L1ME1|LINE|L1 -159012 NM_001348800 26137 Hs.202577 NM_015642 ENSG00000181722 ZBTB20 DPZF|HOF|ODA-8S|PRIMS|ZNF288 zinc finger and BTB domain containing 20 protein-coding 170.769-14 chr7 91188172 91188908 + 0.461538 NA intron (NM_012395, intron 13 of 13) intron (NM_012395, intron 13 of 13) -75893 NM_003505 8321 Hs.94234 NM_003505 ENSG00000157240 FZD1 - frizzled class receptor 1 protein-coding 174.923-6 chr3 112502743 112503136 + 0.461538 NA Intergenic Intergenic -3467 NM_001085357 151888 Hs.445162 NM_181780 ENSG00000186265 BTLA BTLA1|CD272 B and T lymphocyte associated protein-coding 151.692-3 chr18 8040554 8040937 + 0.461538 NA intron (NM_002845, intron 7 of 30) intron (NM_002845, intron 7 of 30) 326289 NR_024419 100192426 Hs.666655 NR_024419 ENSG00000266149 LOC100192426 - uncharacterized LOC100192426 ncRNA 151.846-4 chr2 55798124 55798497 + 0.461538 NA Intergenic L1PA16|LINE|L1 -104466 NM_033109 87178 Hs.388733 NM_033109 ENSG00000138035 PNPT1 COXPD13|DFNB70|OLD35|PNPASE|old-35 polyribonucleotide nucleotidyltransferase 1 protein-coding 151.846-6 chr4 56940459 56941410 + 0.461538 NA Intergenic Intergenic 32021 NM_001193508 5978 Hs.307836 NM_005612 ENSG00000084093 REST DFNA27|GINGF5|HGF5|NRSF|WT6|XBR RE1 silencing transcription factor protein-coding 157.077-8 chr20 11038045 11038548 + 0.461538 NA Intergenic Intergenic 11752 NR_146878 728434 Hs.570365 NR_146878 ENSG00000125899 C20orf187 - chromosome 20 open reading frame 187 (putative) ncRNA 163.769-3 chr11 43937968 43938342 + 0.461538 NA Intergenic Intergenic -4482 NM_001145033 387763 Hs.530443 NM_001145033 ENSG00000187479 C11orf96 AG2 chromosome 11 open reading frame 96 protein-coding 165.846-4 chr2 11981521 11981987 + 0.461538 NA Intergenic MLT1J2|LTR|ERVL-MaLR -25362 NR_110197 100506457 Hs.197824 NR_110196 ENSG00000224184 MIR3681HG - MIR3681 host gene ncRNA 180.231-7 chr8 111287495 111287945 + 0.461538 NA Intergenic Intergenic -51517 NR_125418 101927487 Hs.630004 NR_125418 ENSG00000253103 LINC01609 - long intergenic non-protein coding RNA 1609 ncRNA 168.615 chr15 35498113 35498772 + 0.461538 NA intron (NM_080650, intron 3 of 8) intron (NM_080650, intron 3 of 8) 47723 NM_001141972 89978 Hs.107196 NM_080650 ENSG00000134146 DPH6 ATPBD4 diphthamine biosynthesis 6 protein-coding 172.461-2 chr1 209934289 209934762 + 0.461538 NA Intergenic Intergenic -3649 NM_001146261 255928 Hs.658866 NM_153262 ENSG00000143469 SYT14 SCAR11|sytXIV synaptotagmin 14 protein-coding 158.308-3 chr1 202003575 202004031 + 0.461538 NA TTS (NR_106798) TTS (NR_106798) 679 NR_106798 102465443 NR_106798 ENSG00000275207 MIR6740 hsa-mir-6740 microRNA 6740 ncRNA 186.384 chr14 45942670 45943073 + 0.461538 NA Intergenic L1ME3B|LINE|L1 -121288 NR_102701 100506412 Hs.207545 NR_102699 ENSG00000258700 LINC00871 - long intergenic non-protein coding RNA 871 ncRNA 155.538-10 chr22 36581111 36581560 + 0.461538 NA intron (NM_006078, intron 2 of 3) intron (NM_006078, intron 2 of 3) -52169 NM_003753 8664 Hs.55682 NM_003753 ENSG00000100353 EIF3D EIF3S7|eIF3-p66|eIF3-zeta eukaryotic translation initiation factor 3 subunit D protein-coding 153.231-13 chr3 121802342 121802948 + 0.461538 NA intron (NM_001023570, intron 7 of 14) L1MEc|LINE|L1 32415 NM_001023570 9657 Hs.604110 NM_001023570 ENSG00000173226 IQCB1 NPHP5|PIQ|SLSN5 IQ motif containing B1 protein-coding 167.231-8 chr6 89685502 89685965 + 0.461538 NA non-coding (NR_111915, exon 4 of 4) non-coding (NR_111915, exon 4 of 4) -46986 NM_020466 57226 Hs.177275 NM_020466 ENSG00000083099 LYRM2 DJ122O8.2 LYR motif containing 2 protein-coding 157.846-18 chr7 98964266 98964699 + 0.461538 NA intron (NM_003496, intron 45 of 70) intron (NM_003496, intron 45 of 70) -48683 NR_110102 101927550 Hs.636663 NR_110102 LOC101927550 - uncharacterized LOC101927550 ncRNA 168.769-6 chr2 3955592 3956002 + 0.461538 NA Intergenic Intergenic 18235 NR_037881 100505964 Hs.190267 NR_037881 ENSG00000237401 LINC01304 - long intergenic non-protein coding RNA 1304 ncRNA 172.077 chr14 83090946 83091491 + 0.461538 NA Intergenic Intergenic 448586 NR_146650 101928599 NR_146650 ENSG00000258743 LINC02301 - long intergenic non-protein coding RNA 2301 ncRNA 155.384 chr2 221946001 221946553 + 0.461538 NA Intergenic MER1A|DNA|hAT-Charlie -351870 NR_161172 151278 Hs.350729 NM_153038 ENSG00000163081 CCDC140 - coiled-coil domain containing 140 ncRNA 184.923 chr1 203710071 203710811 + 0.461538 NA intron (NM_001001396, intron 11 of 21) AmnSINE1|SINE|5S-Deu-L2 -19140 NR_003019 677843 Hs.676135 NR_003019 ENSG00000221643 SNORA77 ACA63|SNORA77A small nucleolar RNA, H/ACA box 77 snoRNA 221 chr3 75127103 75127869 + 0.461538 NA Intergenic Tigger3b|DNA|TcMar-Tigger -86990 NR_049831 100846999 NR_049831 ENSG00000266780 MIR4444-2 - microRNA 4444-2 ncRNA 156-6 chr12 22520062 22520657 + 0.461538 NA intron (NM_001286173, intron 7 of 27) intron (NM_001286173, intron 7 of 27) 23838 NM_001286174 9847 Hs.271014 NM_014802 ENSG00000111731 C2CD5 CDP138|KIAA0528 C2 calcium dependent domain containing 5 protein-coding 151.846-13 chr9 99473275 99473880 + 0.461538 NA Intergenic Intergenic -98320 NR_102270 100996569 Hs.745280 NR_102270 ENSG00000271086 NAMA - non-protein coding RNA, associated with MAP kinase pathway and growth arrest ncRNA 176.692-5 chr4 72392052 72392729 + 0.461538 NA intron (NM_014243, intron 4 of 21) intron (NM_014243, intron 4 of 21) 176831 NM_014243 9508 Hs.590919 NM_014243 ENSG00000156140 ADAMTS3 ADAMTS-4|HKLLS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 protein-coding 154.615-6 chr14 63319540 63320121 + 0.461538 NA promoter-TSS (NM_145171) promoter-TSS (NM_145171) -895 NM_145171 122876 Hs.375028 NM_145171 ENSG00000179600 GPHB5 B5|GPB5|ZLUT1 glycoprotein hormone subunit beta 5 protein-coding 171.692-10 chrX 40710671 40711371 + 0.461538 NA intron (NM_004229, intron 8 of 30) MER8|DNA|TcMar-Tigger -24375 NM_001289773 100873985 Hs.460579 NM_001289773 MED14OS MED14-AS1 MED14 opposite strand protein-coding 167.384 chr1 189260020 189260489 + 0.461538 NA Intergenic Intergenic 1215756 NM_001317188 339479 Hs.65765 NM_199051 ENSG00000162670 BRINP3 DBCCR1L|DBCCR1L1|FAM5C BMP/retinoic acid inducible neural specific 3 protein-coding 152.077-4 chr16 51501742 51502353 + 0.461538 NA Intergenic Intergenic -260472 NR_110916 101927364 Hs.133120 NR_110916 ENSG00000260057 LINC01571 - long intergenic non-protein coding RNA 1571 ncRNA 186.692-2 chr1 235721723 235722404 + 0.461538 NA intron (NM_000081, intron 39 of 52) L2a|LINE|L2 -71309 NM_001098721 2786 Hs.159711 NM_004485 ENSG00000168243 GNG4 - G protein subunit gamma 4 protein-coding 161.077-4 chr18 42782224 42782686 + 0.461538 NA intron (NM_002930, intron 4 of 4) (AT)n|Simple_repeat|Simple_repeat 333230 NM_002930 6014 Hs.464985 NM_002930 ENSG00000152214 RIT2 RIBA|RIN|ROC2 Ras like without CAAX 2 protein-coding 170-4 chr4 80582476 80583147 + 0.461538 NA intron (NM_152770, intron 2 of 5) intron (NM_152770, intron 2 of 5) 247091 NM_152770 255119 Hs.527104 NM_152770 ENSG00000197826 CFAP299 C4orf22 cilia and flagella associated protein 299 protein-coding 169.384-3 chr22 33375905 33376584 + 0.461538 NA intron (NM_133642, intron 9 of 14) MER65-int|LTR|ERV1 60425 NR_039921 100616295 NR_039921 ENSG00000266012 MIR4764 - microRNA 4764 ncRNA 152.154-3 chr12 98915993 98916659 + 0.461538 NA intron (NM_152788, intron 17 of 25) intron (NM_152788, intron 17 of 25) -21035 NM_001352212 56899 Hs.506458 NM_020140 ENSG00000185046 ANKS1B AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2 ankyrin repeat and sterile alpha motif domain containing 1B protein-coding 162.615-7 chr8 14099741 14100460 + 0.461538 NA intron (NM_139167, intron 7 of 7) intron (NM_139167, intron 7 of 7) 470410 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 217.231-3 chr5 44546395 44547122 + 0.461538 NA Intergenic Intergenic -36476 NR_131946 102723839 Hs.561412 NR_131946 LINC02224 BRCAT107 long intergenic non-protein coding RNA 2224 ncRNA 162-3 chr16 67044587 67045101 + 0.461538 NA intron (NM_001368708, intron 3 of 4) intron (NM_001368708, intron 3 of 4) 15695 NM_001368710 865 Hs.460988 NM_001755 ENSG00000067955 CBFB PEBP2B core-binding factor subunit beta protein-coding 231.231-3 chr6 133629153 133629894 + 0.461538 NA intron (NR_109982, intron 4 of 8) ERVL-B4-int|LTR|ERVL -191624 NR_027030 154089 Hs.126165 NR_027030 LINC01312 - long intergenic non-protein coding RNA 1312 ncRNA 184.461 chr2 154752643 154753337 + 0.461538 NA intron (NM_002239, intron 2 of 2) intron (NM_002239, intron 2 of 2) 54295 NM_001260509 3760 Hs.591606 NM_002239 ENSG00000162989 KCNJ3 GIRK1|KGA|KIR3.1 potassium voltage-gated channel subfamily J member 3 protein-coding 156.154 chr11 85246585 85247051 + 0.461538 NA intron (NM_001142699, intron 4 of 27) intron (NM_001142699, intron 4 of 27) -323397 NM_001300983 1740 Hs.367656 NM_001364 ENSG00000150672 DLG2 PPP1R58|PSD-93|PSD93|chapsyn-110 discs large MAGUK scaffold protein 2 protein-coding 179.077-10 chr3 81555482 81556022 + 0.461538 NA intron (NM_000158, intron 12 of 15) intron (NM_000158, intron 12 of 15) 205893 NM_000158 2632 Hs.436062 NM_000158 ENSG00000114480 GBE1 APBD|GBE|GSD4 1,4-alpha-glucan branching enzyme 1 protein-coding 154.923-8 chr3 33523611 33524311 + 0.461538 NA intron (NM_001365634, intron 31 of 35) L1MB3|LINE|L1 -83556 NM_001128161 7342 Hs.729120 NM_014517 ENSG00000153560 UBP1 LBP-1B|LBP-1a|LBP1A|LBP1B upstream binding protein 1 protein-coding 164.769-4 chr2 68274801 68275449 + 0.461538 NA Intergenic Intergenic -22593 NM_000945 5534 Hs.280604 NM_000945 ENSG00000221823 PPP3R1 CALNB1|CNB|CNB1 protein phosphatase 3 regulatory subunit B, alpha protein-coding 161.538-8 chr14 19998588 19999227 + 0.461538 NA Intergenic L1ME3G|LINE|L1 -3155 NR_145508 390432 NM_001348271 ENSG00000196383 OR4Q2 OR4Q2P olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene) protein-coding 177.384-2 chr8 78556413 78556913 + 0.461538 NA intron (NR_125389, intron 1 of 2) intron (NR_125389, intron 1 of 2) 1840 NR_125389 101927003 Hs.614849 NR_125389 ENSG00000254266 PKIA-AS1 - PKIA antisense RNA 1 ncRNA 171-4 chr3 54102344 54102800 + 0.461538 NA Intergenic L1ME2|LINE|L1 -19980 NM_018398 55799 Hs.656687 NM_018398 ENSG00000157445 CACNA2D3 HSA272268 calcium voltage-gated channel auxiliary subunit alpha2delta 3 protein-coding 156.154-2 chr11 91824896 91825484 + 0.461538 NA Intergenic Intergenic -399844 NM_001367949 120114 Hs.98523 NM_001008781 ENSG00000165323 FAT3 CDHF15|CDHR10|hFat3 FAT atypical cadherin 3 protein-coding 173.461-2 chr22 26467118 26467695 + 0.461538 NA intron (NR_146315, intron 8 of 14) L1M5|LINE|L1 12082 NR_073136 89781 Hs.474436 NM_022081 ENSG00000100099 HPS4 BLOC3S2|LE HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 protein-coding 175.846-4 chr13 112517354 112518126 + 0.461538 NA intron (NM_006322, intron 16 of 21) AluSx|SINE|Alu 70413 NM_001286278 10426 Hs.224152 NM_006322 ENSG00000126216 TUBGCP3 104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p tubulin gamma complex associated protein 3 protein-coding 183.154-4 chr16 48565333 48565997 + 0.461538 NA intron (NM_153029, intron 1 of 6) L1MEf|LINE|L1 44515 NM_153029 9683 Hs.511839 NM_153029 ENSG00000102921 N4BP1 - NEDD4 binding protein 1 protein-coding 163.384-3 chr8 137220488 137221094 + 0.461538 NA Intergenic Intergenic 192797 NR_125428 101927915 Hs.695851 NR_125428 LOC101927915 - uncharacterized LOC101927915 ncRNA 151.769-11 chr6 64761927 64762357 + 0.461538 NA intron (NM_001292009, intron 22 of 43) L1MA7|LINE|L1 -539276 NM_001271675 441155 Hs.546686 NM_001271675 LOC441155 - zinc finger CCCH-type domain-containing-like protein-coding 240.154-2 chr7 47775157 47775705 + 0.461538 NA intron (NM_138295, intron 56 of 56) L1M5|LINE|L1 13955 NR_038407 84847 Hs.488236 NR_038407 ENSG00000146666 LINC00525 - long intergenic non-protein coding RNA 525 ncRNA 171.384-2 chr11 83379485 83380100 + 0.461538 NA Intergenic Intergenic -93385 NM_021825 60492 Hs.368866 NM_021825 ENSG00000137500 CCDC90B MDS011|MDS025 coiled-coil domain containing 90B protein-coding 176.077-6 chr5 153039187 153039889 + 0.461538 NA Intergenic Intergenic -67189 NR_109877 101927134 Hs.531423 NR_109877 ENSG00000249484 LINC01470 - long intergenic non-protein coding RNA 1470 ncRNA 171.846 chr3 175777929 175778416 + 0.461538 NA intron (NM_207015, intron 13 of 13) intron (NM_207015, intron 13 of 13) -1839 NR_046714 100874245 Hs.614827 NR_046714 NAALADL2-AS1 - NAALADL2 antisense RNA 1 ncRNA 162-2 chr12 47821812 47822218 + 0.461538 NA Intergenic Intergenic -2112 NM_015401 51564 Hs.200063 NM_015401 ENSG00000061273 HDAC7 HD7|HD7A|HDAC7A histone deacetylase 7 protein-coding 153.384 chr3 7150584 7151166 + 0.461538 NA intron (NM_000844, intron 2 of 9) intron (NM_000844, intron 2 of 9) -256858 NR_131906 105376946 Hs.616038 NR_131906 ENSG00000237665 GRM7-AS2 - GRM7 antisense RNA 2 ncRNA 174.769-3 chr14 65264527 65265039 + 0.461538 NA Intergenic AluSg7|SINE|Alu -42436 NR_103769 100128233 Hs.497323 NR_103769 ENSG00000255002 LINC02324 - long intergenic non-protein coding RNA 2324 ncRNA 179.538 chr1 222465947 222466419 + 0.461538 NA Intergenic MER33|DNA|hAT-Charlie 81921 NM_024746 79802 Hs.665660 NM_024746 ENSG00000143512 HHIPL2 KIAA1822L HHIP like 2 protein-coding 156.154-11 chr7 3464436 3465066 + 0.461538 NA intron (NM_152744, intron 1 of 44) intron (NM_152744, intron 1 of 44) 163499 NM_152744 221935 Hs.653013 NM_152744 ENSG00000146555 SDK1 - sidekick cell adhesion molecule 1 protein-coding 153 chr1 233600805 233601371 + 0.461538 NA Intergenic AluSx4|SINE|Alu -13018 NM_002245 3775 Hs.208544 NM_002245 ENSG00000135750 KCNK1 DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1 potassium two pore domain channel subfamily K member 1 protein-coding 167.769 chr10 74647678 74648206 + 0.461538 NA intron (NM_001369124, intron 8 of 9) intron (NM_001369124, intron 8 of 9) -118618 NR_120673 102723439 NR_120673 LOC102723439 - uncharacterized LOC102723439 ncRNA 152.846-4 chr3 163893203 163893914 + 0.461538 NA Intergenic Tigger6a|DNA|TcMar-Tigger 277998 NR_031665 100302148 NR_031665 ENSG00000221251 MIR1263 MIRN1263|hsa-mir-1263 microRNA 1263 ncRNA 157.538-9 chr4 32602999 32603413 + 0.461538 NA Intergenic Intergenic 252168 NR_134672 101927363 Hs.559406 NR_134672 ENSG00000251329 LINC02353 - long intergenic non-protein coding RNA 2353 ncRNA 165.308-7 chr5 3512252 3512718 + 0.461538 NA intron (NR_033898, intron 2 of 4) intron (NR_033898, intron 2 of 4) -8481 NR_104618 102467075 Hs.652949 NR_104618 ENSG00000250716 LINC01017 - long intergenic non-protein coding RNA 1017 ncRNA 186.923-8 chr3 162225993 162226524 + 0.461538 NA Intergenic L1ME2z|LINE|L1 729450 NM_001080440 131149 Hs.585021 NM_001080440 ENSG00000182447 OTOL1 C1QTNF15|C1QTNF16 otolin 1 protein-coding 168 chr17 49707945 49708375 + 0.461538 NA promoter-TSS (NM_005827) promoter-TSS (NM_005827) -196 NM_001278784 10237 Hs.154073 NM_005827 ENSG00000121073 SLC35B1 UGTREL1 solute carrier family 35 member B1 protein-coding 164.384-2 chr8 82272218 82272728 + 0.461538 NA Intergenic Intergenic -430187 NM_022133 64089 Hs.492121 NM_022133 ENSG00000104497 SNX16 - sorting nexin 16 protein-coding 183.769-2 chr8 89816909 89817509 + 0.461538 NA Intergenic Intergenic 59393 NM_003821 8767 Hs.103755 NM_003821 ENSG00000104312 RIPK2 CARD3|CARDIAK|CCK|GIG30|RICK|RIP2 receptor interacting serine/threonine kinase 2 protein-coding 166.461 chr17 53297460 53297958 + 0.461538 NA Intergenic L1MA9|LINE|L1 312204 NM_001243552 100506650 Hs.146556 NM_001243552 C17orf112 - chromosome 17 open reading frame 112 protein-coding 189.846-6 chr9 94508565 94509275 + 0.461538 NA Intergenic AluY|SINE|Alu -46125 NR_121569 101928099 Hs.674409 NR_121566 PCAT7 PCAN-R2 prostate cancer associated transcript 7 ncRNA 193.538-4 chr11 112562108 112562573 + 0.461538 NA Intergenic L2c|LINE|L2 -6538 NR_104155 387810 Hs.512255 NR_104155 ENSG00000255484 LINC02764 - long intergenic non-protein coding RNA 2764 ncRNA 161.077-6 chr2 75189371 75189988 + 0.461538 NA intron (NM_015727, intron 1 of 3) MamRep1151|LTR?|LTR? 9841 NM_001058 6869 Hs.633301 NM_001058 ENSG00000115353 TACR1 NK1R|NKIR|SPR|TAC1R tachykinin receptor 1 protein-coding 177.231-3 chr18 3263777 3264210 + 0.461538 NA intron (NM_001144945, intron 1 of 3) MIR|SINE|MIR 1274 NM_001144945 103910 Hs.190086 NM_033546 ENSG00000118680 MYL12B MLC-B|MRLC2 myosin light chain 12B protein-coding 158.769-7 chr21 16979908 16980617 + 0.461538 NA Intergenic Intergenic 390025 NR_029694 406912 NR_029694 ENSG00000207863 MIR125B2 MIRN125B2|mir-125b-2 microRNA 125b-2 ncRNA 161.692-6 chr3 57741151 57741752 + 0.461538 NA Intergenic Intergenic -15805 NM_001304420 7871 Hs.476432 NM_007159 ENSG00000163681 SLMAP SLAP sarcolemma associated protein protein-coding 217.154 chr1 205723129 205723749 + 0.461538 NA intron (NM_022731, intron 4 of 6) intron (NM_022731, intron 4 of 6) 26743 NM_022731 64710 Hs.213061 NM_022731 ENSG00000069275 NUCKS1 JC7|NUCKS nuclear casein kinase and cyclin dependent kinase substrate 1 protein-coding 170.692-6 chr8 92275037 92275484 + 0.461538 NA Intergenic Intergenic -171875 NM_175634 862 Hs.368431 NM_004349 ENSG00000079102 RUNX1T1 AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2 RUNX1 partner transcriptional co-repressor 1 protein-coding 173.692-4 chr7 21781067 21781501 + 0.461538 NA intron (NM_001277115, intron 57 of 81) intron (NM_001277115, intron 57 of 81) 164615 NM_018719 55536 Hs.744069 NM_018719 ENSG00000164649 CDCA7L JPO2|R1|RAM2 cell division cycle associated 7 like protein-coding 184.846-5 chr16 87023684 87024459 + 0.461538 NA Intergenic Tigger3c|DNA|TcMar-Tigger -33713 NR_126008 440390 Hs.513789 NR_126008 ENSG00000232190 LINC02181 - long intergenic non-protein coding RNA 2181 ncRNA 154 chr10 9117462 9117921 + 0.461538 NA Intergenic (GTGTAT)n|Simple_repeat|Simple_repeat -157922 NR_108039 100507163 Hs.649223 NR_108039 LINC00709 - long intergenic non-protein coding RNA 709 ncRNA 244.154-2 chr8 131792874 131793579 + 0.461538 NA Intergenic MIRc|SINE|MIR -110867 NM_015137 23167 Hs.204564 NM_015137 ENSG00000132294 EFR3A - EFR3 homolog A protein-coding 154.154-12 chr21 31156873 31157455 + 0.461538 NA intron (NM_001353690, intron 16 of 27) MER6|DNA|TcMar-Tigger 3776 NM_001353684 7074 Hs.517228 NM_003253 ENSG00000156299 TIAM1 TIAM-1 T cell lymphoma invasion and metastasis 1 protein-coding 171.308-2 chr15 46802912 46803457 + 0.461538 NA Intergenic Intergenic -380905 NM_001198999 80031 Hs.511265 NM_020858 ENSG00000137872 SEMA6D - semaphorin 6D protein-coding 161.231-3 chr14 62562395 62562795 + 0.461538 NA Intergenic (TAA)n|Simple_repeat|Simple_repeat -422622 NR_104063 101954204 Hs.607093 NR_104063 ENSG00000259142 LINC00644 - long intergenic non-protein coding RNA 644 ncRNA 252.846 chr7 87650641 87651319 + 0.461538 NA intron (NM_001134406, intron 2 of 9) intron (NM_001134406, intron 2 of 9) 22582 NM_138290 154661 Hs.411488 NM_138290 ENSG00000105784 RUNDC3B RPIB9|RPIP9 RUN domain containing 3B protein-coding 164.846-4 chr18 53725387 53725778 + 0.461538 NA Intergenic LTR86C|LTR|ERVL -144523 NR_110800 101928167 Hs.382012 NR_110800 ENSG00000260433 LINC01917 - long intergenic non-protein coding RNA 1917 ncRNA 158.538-5 chr19 32505465 32506187 + 0.461538 NA Intergenic L1MB3|LINE|L1 -75364 NM_004708 9141 Hs.443831 NM_004708 ENSG00000105185 PDCD5 TFAR19 programmed cell death 5 protein-coding 161.077-15 chr9 36330250 36330741 + 0.461538 NA Intergenic L1MB8|LINE|L1 -53439 NM_001190388 10020 Hs.5920 NM_005476 ENSG00000159921 GNE DMRV|GLCNE|IBM2|NM|Uae1 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase protein-coding 198.154-4 chr8 92534575 92535412 + 0.461538 NA Intergenic Kanga2_a|DNA|TcMar-Tc2 120501 NR_125827 102724710 Hs.125714 NR_125827 ENSG00000253634 LOC102724710 - uncharacterized LOC102724710 ncRNA 170.769 chr1 67920062 67920682 + 0.461538 NA intron (NR_040077, intron 1 of 9) L1PA13|LINE|L1 -86905 NM_018841 55970 Hs.431101 NM_018841 ENSG00000172380 GNG12 - G protein subunit gamma 12 protein-coding 152-7 chr2 241376322 241376693 + 0.461538 NA intron (NM_014808, intron 2 of 26) intron (NM_014808, intron 2 of 26) 20222 NM_001282984 9855 Hs.726316 NM_014808 ENSG00000006607 FARP2 FIR|FRG|PLEKHC3 FERM, ARH/RhoGEF and pleckstrin domain protein 2 protein-coding 158.923-10 chr5 73603896 73604306 + 0.461538 NA Intergenic Tigger2b_Pri|DNA|TcMar-Tigger -22057 NM_001080479 64283 Hs.482521 NM_001080479 ENSG00000214944 ARHGEF28 RGNEF|RIP2|p190RHOGEF Rho guanine nucleotide exchange factor 28 protein-coding 153.231-5 chr13 46266182 46266572 + 0.461538 NA intron (NM_001282460, intron 8 of 9) intron (NM_001282460, intron 8 of 9) 31467 NR_047493 100861554 Hs.90866 NR_047493 ENSG00000261097 LINC00563 - long intergenic non-protein coding RNA 563 ncRNA 206.538-3 chr22 48877429 48878062 + 0.461538 NA intron (NR_038944, intron 1 of 6) L1ME1|LINE|L1 10975 NR_038944 100128946 Hs.535676 NR_038944 ENSG00000205632 LINC01310 WI2-81516E3.1 long intergenic non-protein coding RNA 1310 ncRNA 156-9 chr19 55779047 55779523 + 0.461538 NA Intergenic Intergenic 10167 NM_001277397 729974 NM_001277397 ENSG00000229292 RFPL4AL1 RNF210B ret finger protein like 4A like 1 protein-coding 154-3 chr16 56094856 56095331 + 0.461538 NA intron (NR_027078, intron 4 of 4) ERVL-int|LTR|ERVL 96001 NR_027078 283856 Hs.707433 NR_027078 ENSG00000246379 LOC283856 - uncharacterized LOC283856 ncRNA 155.923-4 chr3 97456744 97457482 + 0.461538 NA intron (NM_001080448, intron 7 of 17) intron (NM_001080448, intron 7 of 17) 17506 NM_173655 285220 Hs.272208 NM_173655 ENSG00000080224 EPHA6 EHK-2|EHK2|EK12|EPA6|HEK12|PRO57066 EPH receptor A6 protein-coding 164.615-10 chr2 154367713 154368280 + 0.461538 NA intron (NM_052917, intron 9 of 12) intron (NM_052917, intron 9 of 12) 89442 NR_161181 100144595 Hs.683952 NR_161181 LOC100144595 - uncharacterized LOC100144595 ncRNA 152.077-5 chr2 36082240 36082630 + 0.461538 NA Intergenic MLT1H|LTR|ERVL-MaLR 273135 NR_037631 100288911 Hs.432924 NR_037631 CRIM1-DT - CRIM1 divergent transcript ncRNA 156.308-2 chr14 27643363 27644084 + 0.461538 NA intron (NR_148991, intron 2 of 2) Tigger1|DNA|TcMar-Tigger -10445 NR_130461 100422830 NR_130461 ENSG00000264657 MIR3171 - microRNA 3171 ncRNA 158.769 chr11 113606931 113607612 + 0.461538 NA Intergenic MIR3|SINE|MIR 99037 NM_030770 80975 Hs.46720 NM_030770 ENSG00000166682 TMPRSS5 SPINESIN transmembrane serine protease 5 protein-coding 155.538-7 chr17 32743751 32744209 + 0.461538 NA intron (NM_015194, intron 13 of 21) L2a|LINE|L2 133144 NM_001303279 4642 Hs.602063 NM_015194 ENSG00000176658 MYO1D PPP1R108|myr4 myosin ID protein-coding 157.846-3 chr1 153305104 153305507 + 0.461538 NA intron (NM_052891, intron 2 of 6) intron (NM_052891, intron 2 of 6) 5413 NM_052891 114771 Hs.348266 NM_052891 ENSG00000159527 PGLYRP3 PGLYRPIalpha|PGRP-Ialpha|PGRPIA peptidoglycan recognition protein 3 protein-coding 177.308-2 chr5 163729089 163729696 + 0.461538 NA Intergenic L1PA13|LINE|L1 223773 NM_013283 27430 Hs.54642 NM_013283 ENSG00000038274 MAT2B MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR methionine adenosyltransferase 2B protein-coding 152.154 chr1 47094097 47094514 + 0.384615 NA intron (NM_178134, intron 6 of 11) MIRb|SINE|MIR 27074 NM_178134 199974 Hs.176588 NM_178134 ENSG00000186160 CYP4Z1 CYP4A20 cytochrome P450 family 4 subfamily Z member 1 protein-coding 152.692-7 chr5 167121755 167122395 + 0.384615 NA intron (NM_001122679, intron 1 of 29) intron (NM_001122679, intron 1 of 29) 46326 NR_134280 101927908 NR_134280 ENSG00000253469 LOC101927908 - uncharacterized LOC101927908 ncRNA 167.615-4 chr22 28259215 28260107 + 0.384615 NA intron (NM_001145418, intron 5 of 22) intron (NM_001145418, intron 5 of 22) -200208 NR_106713 102466081 NR_106713 ENSG00000276162 MIR5739 hsa-mir-5739 microRNA 5739 ncRNA 161.538-13 chr5 145437786 145438303 + 0.384615 NA Intergenic Intergenic 397298 NM_182960 153768 Hs.314261 NM_138492 ENSG00000186314 PRELID2 - PRELI domain containing 2 protein-coding 151.769-8 chr2 114062693 114063327 + 0.384615 NA Intergenic MER41B|LTR|ERV1 -83026 NR_034130 100499194 Hs.662336 NR_034130 LOC100499194 - uncharacterized LOC100499194 ncRNA 152.538-3 chr4 52563791 52564307 + 0.384615 NA Intergenic Intergenic 92490 NM_001134223 64854 Hs.7966 NM_022832 ENSG00000109189 USP46 - ubiquitin specific peptidase 46 protein-coding 159.923 chr1 80916997 80917755 + 0.384615 NA Intergenic Intergenic 276089 NR_125942 101927412 Hs.171273 NR_125940 ENSG00000234184 LINC01781 - long intergenic non-protein coding RNA 1781 ncRNA 151.615-12 chr6 106294944 106295480 + 0.384615 NA intron (NR_104403, intron 1 of 4) intron (NR_104403, intron 1 of 4) 21054 NR_104402 9474 Hs.486063 NM_004849 ENSG00000057663 ATG5 APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 autophagy related 5 protein-coding 158.308-13 chr6 147727722 147728262 + 0.384615 NA Intergenic L1MC5|LINE|L1 219302 NM_001030060 389432 Hs.567973 NM_001030060 ENSG00000203727 SAMD5 dJ875H10.1 sterile alpha motif domain containing 5 protein-coding 180.615 chr2 149472120 149472711 + 0.384615 NA 3' UTR (NM_001195685, exon 5 of 5) 3' UTR (NM_001195685, exon 5 of 5) -114943 NR_110240 101929231 Hs.5324 NR_110240 ENSG00000231969 LOC101929231 - uncharacterized LOC101929231 ncRNA 233.154 chr5 36191888 36192589 + 0.384615 NA TTS (NM_153013) TTS (NM_153013) 40127 NM_032637 6502 Hs.23348 NM_005983 ENSG00000145604 SKP2 FBL1|FBXL1|FLB1|p45 S-phase kinase associated protein 2 protein-coding 159.615-3 chr17 61031105 61031750 + 0.384615 NA intron (NM_001330413, intron 17 of 25) intron (NM_001330413, intron 17 of 25) 336277 NR_136397 101927855 Hs.662123 NR_136397 ENSG00000267131 LOC101927855 - uncharacterized LOC101927855 ncRNA 160.538-3 chr8 140327307 140327736 + 0.384615 NA intron (NM_001160372, intron 9 of 22) L1MB4|LINE|L1 130223 NM_001321646 83696 Hs.654911 NM_031466 ENSG00000167632 TRAPPC9 IBP|IKBKBBP|MRT13|NIBP|T1|TRS120 trafficking protein particle complex 9 protein-coding 157.692-7 chr18 1943096 1943632 + 0.384615 NA Intergenic MSTB|LTR|ERVL-MaLR -583735 NR_023925 56651 Hs.541165 NM_031416 LINC00470 C18orf2 long intergenic non-protein coding RNA 470 ncRNA 156-14 chr5 28415597 28416280 + 0.384615 NA Intergenic Tigger3b|DNA|TcMar-Tigger -128273 NR_134265 105374698 Hs.124461 NR_134265 ENSG00000249785 LINC02103 - long intergenic non-protein coding RNA 2103 ncRNA 157.692-2 chr11 90834178 90834977 + 0.384615 NA intron (NR_104190, intron 4 of 6) ERV3-16A3_I-int|LTR|ERVL 34625 NR_031663 100302228 NR_031663 ENSG00000221586 MIR1261 MIRN1261|hsa-mir-1261 microRNA 1261 ncRNA 216.384 chr20 25250147 25251153 + 0.384615 NA intron (NM_002862, intron 1 of 19) intron (NM_002862, intron 1 of 19) 2565 NM_002862 5834 Hs.368157 NM_002862 ENSG00000100994 PYGB GPBB glycogen phosphorylase B protein-coding 154.538 chr14 58648100 58648601 + 0.384615 NA TTS (NR_046095) TTS (NR_046095) 9513 NR_046095 51339 Hs.48950 NM_016651 ENSG00000165617 DACT1 DAPPER|DAPPER1|DPR1|FRODO|HDPR1|TBS2|THYEX3 dishevelled binding antagonist of beta catenin 1 protein-coding 157.615-5 chrX 79109077 79109496 + 0.384615 NA Intergenic Intergenic -61686 NM_032553 84636 Hs.326713 NM_032553 ENSG00000147138 GPR174 FKSG79|GPCR17|LYPSR3 G protein-coupled receptor 174 protein-coding 158.615-2 chr18 12510115 12510684 + 0.384615 NA intron (NM_020148, intron 5 of 15) intron (NM_020148, intron 5 of 15) 77625 NR_136514 105371998 Hs.515283 NR_136514 LOC105371998 - uncharacterized LOC105371998 ncRNA 162.077-7 chr8 120420121 120420759 + 0.384615 NA intron (NM_014078, intron 4 of 6) (AT)n|Simple_repeat|Simple_repeat 24710 NM_014078 28998 Hs.333823 NM_014078 ENSG00000172172 MRPL13 L13|L13A|L13mt|RPL13|RPML13 mitochondrial ribosomal protein L13 protein-coding 151.769-6 chr2 59450810 59451486 + 0.384615 NA Intergenic Tigger3b|DNA|TcMar-Tigger 233440 NR_110219 101927285 Hs.570209 NR_110219 ENSG00000222030 LINC01793 - long intergenic non-protein coding RNA 1793 ncRNA 155.846-9 chr3 144794115 144794552 + 0.384615 NA Intergenic (AT)n|Simple_repeat|Simple_repeat 821252 NM_001134470 205428 Hs.288954 NM_173552 ENSG00000181744 DIPK2A C3orf58|DIA1|GoPro49|HASF divergent protein kinase domain 2A protein-coding 159.308-3 chr17 71187427 71188015 + 0.384615 NA intron (NR_104152, intron 1 of 3) intron (NR_104152, intron 1 of 3) 14458 NR_104152 101928165 Hs.407613 NR_104152 ENSG00000260785 CASC17 LINC00600 cancer susceptibility 17 ncRNA 165.769-5 chr14 41027917 41028389 + 0.384615 NA intron (NR_109758, intron 3 of 3) intron (NR_109758, intron 3 of 3) 73442 NR_109757 644919 Hs.434414 NR_109757 LINC02315 - long intergenic non-protein coding RNA 2315 ncRNA 180.692-2 chr1 166556581 166557158 + 0.384615 NA Intergenic MER57-int|LTR|ERV1 -47047 NR_002925 116123 Hs.348539 NM_138784 ENSG00000215834 FMO9P - flavin containing dimethylaniline monoxygenase 9, pseudogene pseudo 168.769 chr1 171182351 171182981 + 0.384615 NA Intergenic Intergenic -2542 NM_001365900 2327 Hs.144912 NM_001460 ENSG00000094963 FMO2 FMO1B1 flavin containing dimethylaniline monoxygenase 2 protein-coding 154.769-5 chr5 29548685 29549500 + 0.384615 NA Intergenic THE1D-int|LTR|ERVL-MaLR -153116 NR_104628 101929681 Hs.549659 NR_104628 LINC02064 - long intergenic non-protein coding RNA 2064 ncRNA 152.692 chr14 48046831 48047333 + 0.384615 NA Intergenic L2|LINE|L2 -252068 NR_039996 100506433 Hs.547419 NR_039996 ENSG00000259129 LINC00648 - long intergenic non-protein coding RNA 648 ncRNA 157.615-2 chr14 65930373 65930922 + 0.384615 NA Intergenic AluJb|SINE|Alu 459545 NR_030355 693210 NR_030355 ENSG00000207781 MIR625 MIRN625|hsa-mir-625 microRNA 625 ncRNA 164.461 chr3 104063589 104064399 + 0.384615 NA Intergenic Intergenic -539878 NR_039611 100616336 NR_039611 ENSG00000265328 MIR548AB - microRNA 548ab ncRNA 201.846-5 chr17 61809717 61810747 + 0.384615 NA intron (NM_032043, intron 6 of 19) intron (NM_032043, intron 6 of 19) 53327 NM_032043 83990 Hs.128903 NM_032043 ENSG00000136492 BRIP1 BACH1|FANCJ|OF BRCA1 interacting protein C-terminal helicase 1 protein-coding 179.461-3 chr6 166992926 166993575 + 0.384615 NA Intergenic MER8|DNA|TcMar-Tigger 4662 NR_037504 100500857 NR_037504 ENSG00000265828 MIR3939 mir-3939 microRNA 3939 ncRNA 183.615-4 chr14 71340173 71340687 + 0.384615 NA intron (NM_001354285, intron 2 of 24) MIRb|SINE|MIR 19954 NM_001354288 26037 Hs.654657 NM_015556 ENSG00000197555 SIPA1L1 E6TP1|SPAR1 signal induced proliferation associated 1 like 1 protein-coding 155.154 chr14 54679552 54680062 + 0.384615 NA intron (NM_015589, intron 1 of 11) intron (NM_015589, intron 1 of 11) -75026 NM_001161577 23034 Hs.98259 NM_015589 ENSG00000020577 SAMD4A SAMD4|SMAUG|SMAUG1|SMG|SMGA sterile alpha motif domain containing 4A protein-coding 151.923-4 chr10 99280694 99281096 + 0.384615 NA Intergenic L2a|LINE|L2 -45020 NM_001166244 60495 Hs.500750 NM_021828 ENSG00000172987 HPSE2 HPA2|HPR2|UFS|UFS1 heparanase 2 (inactive) protein-coding 153.231-7 chr18 29746323 29746918 + 0.384615 NA Intergenic Intergenic -552290 NR_031684 100302131 NR_031684 ENSG00000283218 MIR302F MIRN302F|hsa-mir-302f microRNA 302f ncRNA 216.923-5 chr3 113292723 113293562 + 0.384615 NA intron (NM_001164496, intron 34 of 34) MLT1L|LTR|ERVL-MaLR 81026 NM_001301861 91653 Hs.591318 NM_033254 ENSG00000144857 BOC CDON2 BOC cell adhesion associated, oncogene regulated protein-coding 152.923-11 chr3 146947323 146947829 + 0.384615 NA Intergenic Intergenic 25653 NR_135561 101927866 Hs.586116 NR_135560 ENSG00000242671 LINC02010 - long intergenic non-protein coding RNA 2010 ncRNA 180.769-5 chr8 84822611 84823107 + 0.384615 NA intron (NM_001287244, intron 3 of 7) intron (NM_001287244, intron 3 of 7) 116932 NM_001287244 138046 Hs.121663 NM_173848 ENSG00000184672 RALYL HNRPCL3 RALY RNA binding protein like protein-coding 163.461-2 chr2 177488504 177489341 + 0.384615 NA intron (NM_003659, intron 11 of 19) intron (NM_003659, intron 11 of 19) 63874 NM_152517 150737 Hs.447659 NM_152517 ENSG00000196659 TTC30B IFT70|IFT70B|fleer tetratricopeptide repeat domain 30B protein-coding 169.384-2 chr2 96424751 96425546 + 0.384615 NA Intergenic MER31-int|LTR|ERV1 80209 NM_001285486 93082 Hs.149219 NM_001080535 ENSG00000163121 NEURL3 LINCR|RNF132 neuralized E3 ubiquitin protein ligase 3 protein-coding 152.154-11 chr3 59737015 59737711 + 0.384615 NA Intergenic Intergenic -78866 NR_149028 339902 Hs.132446 NR_149028 LOC339902 - hCG1813818 ncRNA 157.077-4 chr14_GL000225v1_random 13063 13876 + 0.384615 NA NA BSR/Beta|Satellite|Satellite NA NA 169.461-2 chr8 133376218 133376785 + 0.384615 NA Intergenic Intergenic -79197 NM_006096 10397 Hs.372914 NM_006096 ENSG00000104419 NDRG1 CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5 N-myc downstream regulated 1 protein-coding 166.538-6 chr8 100270571 100271129 + 0.384615 NA intron (NM_001353837, intron 3 of 9) intron (NM_001353837, intron 3 of 9) 31343 NM_001353837 25897 Hs.292882 NM_015435 ENSG00000034677 RNF19A RNF19 ring finger protein 19A, RBR E3 ubiquitin protein ligase protein-coding 160.154-9 chr20 40108202 40108798 + 0.384615 NA Intergenic AluSz|SINE|Alu 104039 NR_109937 100505663 Hs.559348 NR_109936 ENSG00000237767 LINC01370 HI-LNC25|HILNC25 long intergenic non-protein coding RNA 1370 ncRNA 166.538-3 chr4 184458764 184459321 + 0.384615 NA intron (NM_002199, intron 1 of 8) intron (NM_002199, intron 1 of 8) 15508 NM_002199 3660 Hs.654566 NM_002199 ENSG00000168310 IRF2 IRF-2 interferon regulatory factor 2 protein-coding 209.538-4 chr2 10899207 10900083 + 0.384615 NA Intergenic L2a|LINE|L2 -12289 NM_002236 3754 Hs.23735 NM_002236 ENSG00000162975 KCNF1 IK8|KCNF|KV5.1|kH1 potassium voltage-gated channel modifier subfamily F member 1 protein-coding 164.384 chr4 69080788 69081670 + 0.384615 NA intron (NM_001349568, intron 1 of 6) intron (NM_001349568, intron 1 of 6) -15245 NM_001330719 7364 Hs.654424 NM_001074 ENSG00000171234 UGT2B7 UDPGT 2B7|UDPGT 2B9|UDPGT2B7|UDPGTH2|UDPGTh-2|UGT2B9 UDP glucuronosyltransferase family 2 member B7 protein-coding 160.615-12 chr3 153747601 153748287 + 0.384615 NA intron (NR_146713, intron 1 of 6) MIR|SINE|MIR 14582 NR_146713 105374165 Hs.637991 NR_146713 LINC02006 - long intergenic non-protein coding RNA 2006 ncRNA 166.077-3 chr20 12893660 12894388 + 0.384615 NA intron (NR_109868, intron 9 of 11) intron (NR_109868, intron 9 of 11) 42939 NR_109872 102606466 Hs.602196 NR_109872 LOC102606466 - uncharacterized LOC102606466 ncRNA 197.154-2 chr10 25967748 25968487 + 0.384615 NA intron (NM_001368265, intron 4 of 7) L1MEf|LINE|L1 33888 NM_017433 53904 Hs.662630 NM_017433 ENSG00000095777 MYO3A DFNB30 myosin IIIA protein-coding 159.769-10 chr5 66145934 66146591 + 0.384615 NA intron (NM_139168, intron 1 of 12) intron (NM_139168, intron 1 of 12) 1427 NM_139168 140890 Hs.49367 NM_139168 ENSG00000153914 SREK1 SFRS12|SRrp508|SRrp86 splicing regulatory glutamic acid and lysine rich protein 1 protein-coding 162.769-10 chr8 125952754 125953187 + 0.384615 NA Intergenic MER92-int|LTR|ERV1 -1773 NR_038446 100130231 Hs.729642 NR_038446 ENSG00000245164 LINC00861 - long intergenic non-protein coding RNA 861 ncRNA 168.692-5 chr2 200900856 200901739 + 0.384615 NA intron (NM_001369445, intron 6 of 6) L1MC4|LINE|L1 9379 NM_001142356 60491 Hs.145284 NM_021824 ENSG00000196290 NIF3L1 ALS2CR1|CALS-7|MDS015 NGG1 interacting factor 3 like 1 protein-coding 154.154-17 chr5 110347784 110348336 + 0.384615 NA Intergenic Intergenic 165855 NR_031644 100302159 NR_031644 ENSG00000221436 MIR548F3 MIR548F-3|MIRN548F3|hsa-mir-548f-3 microRNA 548f-3 ncRNA 177.538 chr15 25568320 25569187 + 0.384615 NA Intergenic Intergenic -129697 NM_130838 7337 Hs.598862 NM_000462 ENSG00000114062 UBE3A ANCR|AS|E6-AP|EPVE6AP|HPVE6A ubiquitin protein ligase E3A protein-coding 187.077 chr11 42102083 42103268 + 0.384615 NA Intergenic L2a|LINE|L2 -17217 NR_135065 101928591 Hs.149771 NR_135065 LINC02745 - long intergenic non-protein coding RNA 2745 ncRNA 152.846 chr11 47785687 47786463 + 0.384615 NA intron (NM_015231, intron 32 of 35) intron (NM_015231, intron 32 of 35) -18734 NM_001318339 23360 Hs.6834 NM_015308 ENSG00000109920 FNBP4 FBP30 formin binding protein 4 protein-coding 159.846-11 chr6 52725135 52725896 + 0.384615 NA Intergenic MLT1F1|LTR|ERVL-MaLR 19644 NR_033760 730152 Hs.739662 NR_033760 GSTA7P GSTAP2|GSTAP6 glutathione S-transferase alpha 7, pseudogene pseudo 157.461 chr16 11581081 11581667 + 0.384615 NA intron (NR_024320, intron 1 of 3) intron (NR_024320, intron 1 of 3) 4999 NM_004862 9516 Hs.459940 NM_004862 ENSG00000189067 LITAF PIG7|SIMPLE|TP53I7 lipopolysaccharide induced TNF factor protein-coding 179.692-6 chr3 99550210 99550977 + 0.384615 NA Intergenic Intergenic -88001 NM_020351 1295 Hs.654548 NM_001850 ENSG00000144810 COL8A1 C3orf7 collagen type VIII alpha 1 chain protein-coding 158.384-2 chr18 70415653 70416101 + 0.384615 NA Intergenic Intergenic -31286 NR_110764 101060542 Hs.586967 NR_110764 ENSG00000266278 LINC01910 - long intergenic non-protein coding RNA 1910 ncRNA 161.538-15 chr7 31115035 31115489 + 0.384615 NA Intergenic Arthur1B|DNA|hAT-Tip100 62801 NM_001199635 117 Hs.377783 NM_001118 ENSG00000078549 ADCYAP1R1 PAC1|PAC1R|PACAPR|PACAPRI ADCYAP receptor type I protein-coding 192.077-2 chr8 117161034 117161830 + 0.384615 NA intron (NM_173851, intron 4 of 7) intron (NM_173851, intron 4 of 7) 26437 NM_001172814 169026 Hs.532270 NM_173851 ENSG00000164756 SLC30A8 ZNT8|ZnT-8 solute carrier family 30 member 8 protein-coding 156.154-7 chr3 100212575 100213216 + 0.384615 NA Intergenic Intergenic 27071 NR_028358 644444 Hs.652353 NR_028357 ENSG00000235156 TMEM30CP CDC50C|TMEM30C transmembrane protein 30C, pseudogene pseudo 175.384 chr1 9905918 9906593 + 0.384615 NA intron (NM_020248, intron 1 of 5) MIR|SINE|MIR 4014 NM_001012329 56998 Hs.463759 NM_020248 ENSG00000178585 CTNNBIP1 ICAT catenin beta interacting protein 1 protein-coding 161.538-7 chr12 77402736 77403380 + 0.384615 NA Intergenic Intergenic -337489 NM_203394 144455 Hs.416375 NM_203394 ENSG00000165891 E2F7 - E2F transcription factor 7 protein-coding 208.692-3 chr8 135595109 135595992 + 0.384615 NA intron (NM_006558, intron 6 of 8) intron (NM_006558, intron 6 of 8) 138094 NM_006558 10656 Hs.444558 NM_006558 ENSG00000131773 KHDRBS3 Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile KH RNA binding domain containing, signal transduction associated 3 protein-coding 155.923-5 chr3 131878190 131878900 + 0.384615 NA intron (NM_130808, intron 2 of 15) L1ME3A|LINE|L1 107386 NR_049890 100847040 NR_049890 ENSG00000265859 MIR5704 - microRNA 5704 ncRNA 178.077-2 chr17 51516963 51517844 + 0.384615 NA Intergenic Intergenic 81976 NR_146897 105371828 Hs.640153 NR_146897 LINC02073 - long intergenic non-protein coding RNA 2073 ncRNA 151.692-5 chr2 69401059 69401821 + 0.384615 NA intron (NM_001002756, intron 5 of 6) L1ME3A|LINE|L1 -14186 NM_001244710 2673 Hs.580300 NM_002056 ENSG00000198380 GFPT1 CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG glutamine--fructose-6-phosphate transaminase 1 protein-coding 169.231-5 chr3 32374814 32375310 + 0.384615 NA Intergenic AluJb|SINE|Alu -16791 NM_181472 112616 Hs.440494 NM_138410 ENSG00000153551 CMTM7 CKLFSF7 CKLF like MARVEL transmembrane domain containing 7 protein-coding 156.769-10 chr6 99950864 99951498 + 0.384615 NA intron (NM_001040179, intron 2 of 5) LTR33A|LTR|ERVL -42857 NR_038384 728012 Hs.434366 NR_038384 ENSG00000229315 MCHR2-AS1 - MCHR2 antisense RNA 1 ncRNA 156.154-4 chr12 50202424 50202948 + 0.384615 NA intron (NM_016357, intron 6 of 10) intron (NM_016357, intron 6 of 10) -1153 NM_001243775 51474 Hs.525419 NM_016357 ENSG00000050405 LIMA1 EPLIN|LDLCQ8|SREBP3 LIM domain and actin binding 1 protein-coding 169.154-2 chr1 191819953 191820893 + 0.384615 NA Intergenic Intergenic -338039 NM_130782 64407 Hs.440890 NM_130782 ENSG00000150681 RGS18 RGS13 regulator of G protein signaling 18 protein-coding 167.077-4 chr2 174703972 174704573 + 0.384615 NA Intergenic Intergenic -15528 NR_002315 440926 Hs.533624 NR_002315 H3F3AP4 p13 H3 histone, family 3A, pseudogene 4 pseudo 157.538-11 chr6 54139771 54140684 + 0.307692 NA intron (NM_001281746, intron 4 of 11) intron (NM_001281746, intron 4 of 11) 28784 NM_001281747 90523 Hs.449276 NM_138569 ENSG00000146147 MLIP C6orf142|CIP muscular LMNA interacting protein protein-coding 151.846-9 chr5 65390438 65391059 + 0.307692 NA intron (NR_135689, intron 7 of 25) intron (NR_135689, intron 7 of 25) 91172 NM_197941 11174 Hs.482291 NM_197941 ENSG00000049192 ADAMTS6 ADAM-TS 6|ADAM-TS6|ADAMTS-6 ADAM metallopeptidase with thrombospondin type 1 motif 6 protein-coding 166.077-8 chr8 118302564 118303528 + 0.307692 NA intron (NM_001101676, intron 4 of 4) intron (NM_001101676, intron 4 of 4) -191227 NM_000127 2131 Hs.492618 NM_000127 ENSG00000182197 EXT1 EXT|LGCR|LGS|TRPS2|TTV exostosin glycosyltransferase 1 protein-coding 153.538-3 chr2 180356445 180357202 + 0.307692 NA Intergenic L1PBb|LINE|L1 -335281 NR_104322 101669767 NR_104319 ENSG00000281131 SCHLAP1 LINC00913|PCAT11|PCAT114 SWI/SNF complex antagonist associated with prostate cancer 1 ncRNA 165.077-5 chr2 115280218 115281314 + 0.307692 NA intron (NM_001321906, intron 2 of 26) intron (NM_001321906, intron 2 of 26) -28471 NM_020868 57628 Hs.580539 NM_020868 ENSG00000175497 DPP10 DPL2|DPPY|DPRP-3|DPRP3 dipeptidyl peptidase like 10 protein-coding 163.384-2 chr7 11941630 11942372 + 0.307692 NA Intergenic L2a|LINE|L2 -109803 NM_015204 221981 Hs.120855 NM_015204 ENSG00000005108 THSD7A - thrombospondin type 1 domain containing 7A protein-coding 156.615-10 chr8 13617509 13618486 + 0.307692 NA Intergenic Intergenic -11693 NR_134450 102725080 Hs.130621 NR_134450 LOC102725080 - uncharacterized LOC102725080 ncRNA 159.308-7 chr8 107479370 107480176 + 0.307692 NA intron (NM_001199859, intron 1 of 8) intron (NM_001199859, intron 1 of 8) 18145 NM_001146 284 Hs.369675 NM_001146 ENSG00000154188 ANGPT1 AGP1|AGPT|ANG1 angiopoietin 1 protein-coding